BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040427
(329 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255536887|ref|XP_002509510.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
gi|223549409|gb|EEF50897.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
Length = 329
Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust.
Identities = 300/329 (91%), Positives = 318/329 (96%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MP+IPEEPLLAPNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLSQDLRHWE+LT DE
Sbjct: 1 MPAIPEEPLLAPNPDRFCMFPIQYPEIWEMYKKAEASFWTAEEVDLSQDLRHWESLTPDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
KHF++HVLAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFISHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDS+EKNRLFHAIETVPC+AKKA WAL WIDGSE+FAER+IAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSNEKNRLFHAIETVPCIAKKAEWALKWIDGSESFAERIIAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLL+ KLSEERVK +V++AV IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLKKKLSEERVKGIVRDAVNIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNGELMSQYIEFVADRLLGALG GK Y V+NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGCGKEYNVSNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKA+VMSS+NGNGG HVFK+DEDF
Sbjct: 301 RVGEYQKAAVMSSINGNGGTHVFKMDEDF 329
>gi|224129040|ref|XP_002328875.1| predicted protein [Populus trichocarpa]
gi|222839305|gb|EEE77642.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 632 bits (1631), Expect = e-179, Method: Compositional matrix adjust.
Identities = 301/329 (91%), Positives = 316/329 (96%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MP+IPEEPLLA NPDRFCMFPIQYP IWEMYKKAEASFWTAEEVDLS D+RHWE LT DE
Sbjct: 1 MPAIPEEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDIRHWENLTPDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
KHF++HVLAFFAASDGIVLENLAGRFM EVQV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFISHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDS+EKNRLFHAIETVPCVAKKA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSEEKNRLFHAIETVPCVAKKARWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEE+VK +VK+AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALPCALVGMNGELMSQYIEFVADRLLGALG GK+Y VANPFDWMELISLQGKTNFFEK
Sbjct: 241 VDALPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVMSS+NGNGGNHVFK+DEDF
Sbjct: 301 RVGEYQKASVMSSINGNGGNHVFKMDEDF 329
>gi|225451453|ref|XP_002269951.1| PREDICTED: ribonucleoside-diphosphate reductase small chain [Vitis
vinifera]
gi|147804660|emb|CAN64484.1| hypothetical protein VITISV_012640 [Vitis vinifera]
Length = 329
Score = 628 bits (1620), Expect = e-178, Method: Compositional matrix adjust.
Identities = 295/329 (89%), Positives = 314/329 (95%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MPSIPEEPLLAPNPDRFCMFPIQYP++WEMYKKAEASFWTAEEVDLSQD R WE LT+DE
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWENLTSDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
KHF++H+LAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61 KHFISHILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKD EKNRLFHAI+T+PCVAKKA WAL WIDGSETFAERL+AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDPKEKNRLFHAIDTIPCVAKKAQWALRWIDGSETFAERLLAFACVEGIFFSGSFCSIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERVKA+V ++V+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKAIVADSVDIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALPCALVGMN LMSQYIEFVADRLLGALGYGK+Y V+NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNSALMSQYIEFVADRLLGALGYGKMYNVSNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVMSSLNG+G HVFK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGDGDTHVFKMDEDF 329
>gi|224055741|ref|XP_002298630.1| predicted protein [Populus trichocarpa]
gi|222845888|gb|EEE83435.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 625 bits (1612), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/329 (90%), Positives = 312/329 (94%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MP+IPEEPLLA NPDRFCMFPIQYP IWEMYKKAEASFWTAEEVDLS D+ HWE LT DE
Sbjct: 1 MPAIPEEPLLAENPDRFCMFPIQYPSIWEMYKKAEASFWTAEEVDLSSDVGHWENLTPDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
KHF++HVLAFFAASDGIVLEN+AGRFM EVQV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDS EKNRLFHAIETVPCVAKKA WAL WIDG E+FAERLIAFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERVK +VKEAV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGIVKEAVDIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D+LPCALVGMNGELMSQYIEFVADRLLGALG GK+Y VANPFDWMELISLQGKTNFFEK
Sbjct: 241 VDSLPCALVGMNGELMSQYIEFVADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVMSS+NGNG NHVFK+DEDF
Sbjct: 301 RVGEYQKASVMSSINGNGDNHVFKMDEDF 329
>gi|356571527|ref|XP_003553928.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 329
Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/329 (88%), Positives = 313/329 (95%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW++LT E
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFVTHVLAFFAASDGIVLENLAGRF E+Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFVTHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDSD+KN LF AI+T+PCVAKKA WAL WID S++FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSDQKNHLFRAIDTIPCVAKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+EERV+ +V++AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVRDAVDIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG+LMSQYIEFVADRLLGALG GK+Y V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVM+SLNGNGG HVFK+DEDF
Sbjct: 301 RVGEYQKASVMNSLNGNGGTHVFKMDEDF 329
>gi|449455910|ref|XP_004145693.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Cucumis sativus]
Length = 329
Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust.
Identities = 291/329 (88%), Positives = 311/329 (94%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MPSIP+EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW++LT+DE
Sbjct: 1 MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
KHF+THVLAFFAASDGIVLENLAGRFM EVQVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDS+EKNRLFHAI+TVPCV KKA WAL WID +E+FAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+ +RVK +V EAV IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG+LMSQYIEFVADRL+GALGY K+Y V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVMS+LNGNGG H FK+DEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329
>gi|449492913|ref|XP_004159139.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Cucumis sativus]
Length = 329
Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/329 (88%), Positives = 310/329 (94%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MPSIP+EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD RHW++LT+DE
Sbjct: 1 MPSIPDEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDTRHWDSLTSDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
KHF+THVLAFFAASDGIVLENLAGRFM E QVAE RAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 KHFITHVLAFFAASDGIVLENLAGRFMKEXQVAEVRAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDS+EKNRLFHAI+TVPCV KKA WAL WID +E+FAER++AFACVEGIFFSGSFC+IF
Sbjct: 121 IKDSNEKNRLFHAIDTVPCVKKKADWALKWIDSTESFAERILAFACVEGIFFSGSFCSIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+ +RVK +V EAV IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLNVDRVKEIVMEAVNIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG+LMSQYIEFVADRL+GALGY K+Y V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPVALVGMNGDLMSQYIEFVADRLVGALGYDKIYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVMS+LNGNGG H FK+DEDF
Sbjct: 301 RVGEYQKASVMSNLNGNGGIHEFKMDEDF 329
>gi|356558708|ref|XP_003547645.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 330
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/330 (87%), Positives = 312/330 (94%), Gaps = 1/330 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW++LT E
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWDSLTDGE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFV+HVLAFFAASDGIVLENLAGRF E+Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFVSHVLAFFAASDGIVLENLAGRFTKEIQIPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDS +K+ LF AI+T+PCV KKA WAL WID S++FAERL+AFACVEGIFFSGSFCA+F
Sbjct: 121 IKDSSQKSHLFRAIDTIPCVTKKAQWALRWIDSSDSFAERLVAFACVEGIFFSGSFCAVF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL+EERV+ +VK+AV+IEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLTEERVREIVKDAVDIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG+LMSQYIEFVADRLLGALG GK+Y V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGN-GGNHVFKIDEDF 329
RVGEYQKASVMSSLNGN GGNHVFK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGGNHVFKMDEDF 330
>gi|356505372|ref|XP_003521465.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Glycine max]
Length = 329
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 290/329 (88%), Positives = 306/329 (93%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MPSIPEE LL PNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW L+ E
Sbjct: 1 MPSIPEERLLTPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWATLSDGE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+THVLAFFAASDGIVLENLAGRF E+Q+ EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFITHVLAFFAASDGIVLENLAGRFTKEIQLPEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDS EKNRLF AI T+PC+ KKA WAL WID SE+FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSTEKNRLFRAINTIPCITKKAQWALRWIDASESFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERV+ +V++AVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVREIVRDAVEIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNGELMS+YIEFVADRLL ALG GK+YG NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGELMSRYIEFVADRLLDALGCGKVYGAQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVMSSLNGNGG HVFK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGGAHVFKMDEDF 329
>gi|1710401|sp|P49730.1|RIR2_TOBAC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleoside-diphosphate reductase R2
subunit; AltName: Full=Ribonucleotide reductase small
subunit
gi|1044912|emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum]
Length = 329
Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust.
Identities = 292/329 (88%), Positives = 305/329 (92%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MP IPEEPLLA +PDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLS D RHWE LT E
Sbjct: 1 MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+THVLAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61 RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDSDEK+RLF A+ET PCV KKA WAL WIDGSETFAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKL+EERVK +V +AVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG+LMS+YIEFVADRLL ALGY KLY NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVMSSLNGNG H FK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGATHEFKLDEDF 329
>gi|388503744|gb|AFK39938.1| unknown [Medicago truncatula]
Length = 330
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/330 (84%), Positives = 302/330 (91%), Gaps = 1/330 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MP+ PEEPLLAPNPDRFCMFPIQYP+IWEMYKKAEASFWTAEEVDLS DL+HW+ LT E
Sbjct: 1 MPAFPEEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSSDLKHWQNLTDGE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIVLENLAGRFM E+QV+EARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 61 RHFISHVLAFFAASDGIVLENLAGRFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
I DS EKNRLFHAIET+PC+AKKA WA+ WID S++FAER++AFACVEGIFFSGSFCAIF
Sbjct: 121 ISDSAEKNRLFHAIETIPCIAKKADWAMKWIDSSDSFAERIVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLS ERVK +V +AVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSSERVKEIVCDAVEIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
C LPCALVGMNG LMS YIEFVADRLLG LG K+Y V NPFDWMELISLQGKTNFFEK
Sbjct: 241 CHTLPCALVGMNGGLMSTYIEFVADRLLGELGCEKVYNVQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNG-GNHVFKIDEDF 329
RVGEYQKASVM+SLNGNG + FK+DEDF
Sbjct: 301 RVGEYQKASVMNSLNGNGAADFCFKLDEDF 330
>gi|297805560|ref|XP_002870664.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
lyrata]
gi|297316500|gb|EFH46923.1| ribonucleoside-diphosphate reductase [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 585 bits (1508), Expect = e-165, Method: Compositional matrix adjust.
Identities = 275/333 (82%), Positives = 309/333 (92%), Gaps = 4/333 (1%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
MPS+PEEP+L P PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD R WE +L+ D
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLSND 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+ HVLAFFAASDGIVLENL+ RFM++VQ++EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD+ E++ LF AIET+PCV KKA WA+ WI+GS++FAER++AFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLRTKL EER+K++V +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEERLKSIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN ELMSQYIEFVADRLL ALG GK+YGV+NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLTALGCGKVYGVSNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG---NHVFKIDEDF 329
KRVGEYQKASVMSS++GN +HVFK+DEDF
Sbjct: 301 KRVGEYQKASVMSSVHGNAAFNDDHVFKLDEDF 333
>gi|75224904|sp|Q6Y657.1|RIR2B_ARATH RecName: Full=Putative ribonucleoside-diphosphate reductase small
chain B; AltName: Full=Ribonucleoside-diphosphate
reductase R2B subunit; AltName: Full=Ribonucleotide
reductase small subunit B
gi|37729626|gb|AAO62422.1| ribonucleotide reductase small subunit [Arabidopsis thaliana]
Length = 333
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 274/333 (82%), Positives = 308/333 (92%), Gaps = 4/333 (1%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
MPS+PEEP+L P PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD R WE +LT D
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+ HVLAFFAASDGIVLENL+ RFM++VQ++EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD+ E++ LF AIET+PCV KKA WA+ WI+GS++FAER++AFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLRTKL E+R+KA+V +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN ELMSQYIEFVADRLL ALG K+YGV+NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG---NHVFKIDEDF 329
KRVGEYQKAS+MSS++GN +HVFK+DEDF
Sbjct: 301 KRVGEYQKASIMSSVHGNAAFNDDHVFKLDEDF 333
>gi|15232077|ref|NP_189342.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis
thaliana]
gi|75273949|sp|Q9LSD0.1|RIR2C_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain C;
AltName: Full=Ribonucleoside-diphosphate reductase TSO2
subunit; AltName: Full=Ribonucleotide reductase small
subunit C
gi|9279629|dbj|BAB01087.1| ribonucleotide reductase [Arabidopsis thaliana]
gi|17380726|gb|AAL36193.1| putative ribonucleotide reductase small subunit [Arabidopsis
thaliana]
gi|21436297|gb|AAM51287.1| putative ribonucleotide reductase small subunit [Arabidopsis
thaliana]
gi|332643740|gb|AEE77261.1| Ribonucleoside-diphosphate reductase small chain C [Arabidopsis
thaliana]
Length = 332
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/332 (85%), Positives = 309/332 (93%), Gaps = 3/332 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
MPS+PEEPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE +L
Sbjct: 1 MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+ HVLAFFAASDGIVLENLA RFM++VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD+ E++ LF AIET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+TKLSEERVK++V +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN +LMSQYIEFVADRLLGALGYGK+YGV NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG--NHVFKIDEDF 329
KRVG+YQKASVMSS+NGNG NHVF +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332
>gi|297818266|ref|XP_002877016.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
lyrata]
gi|297322854|gb|EFH53275.1| hypothetical protein ARALYDRAFT_484491 [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 280/329 (85%), Positives = 305/329 (92%), Gaps = 3/329 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKH 62
+PEEPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE L E+H
Sbjct: 1 MPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENNLNDGERH 60
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ HVLAFFAASDGIVLENLA RFM++VQV+EARAFYGFQIAIENIHSEMYSLLL+TYIK
Sbjct: 61 FIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDTYIK 120
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D+ E++ LF AIET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+IFWL
Sbjct: 121 DNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+TKLSEERVK++V +AVEIEREFVCD
Sbjct: 181 KKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREFVCD 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALPCALVGMN +LMSQYIEFVADRLLGALGYGK+YGV NPFDWMELISLQGKTNFFEKRV
Sbjct: 241 ALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGG--NHVFKIDEDF 329
G+YQKASVMSS+NGNG NHVF +DEDF
Sbjct: 301 GDYQKASVMSSVNGNGAFDNHVFSLDEDF 329
>gi|194690416|gb|ACF79292.1| unknown [Zea mays]
gi|194704028|gb|ACF86098.1| unknown [Zea mays]
gi|195619132|gb|ACG31396.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|223943167|gb|ACN25667.1| unknown [Zea mays]
gi|414586551|tpg|DAA37122.1| TPA: Ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 273/339 (80%), Positives = 294/339 (86%), Gaps = 10/339 (2%)
Query: 1 MPSIP--------EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRH 52
MPS P +EPLLA + DRF MFPI+YPQIWE YKKA ASFWTAEEVDLS D RH
Sbjct: 1 MPSAPALVPACDMQEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARH 60
Query: 53 WEA-LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSE 111
W+A L+ DE+HF++HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSE
Sbjct: 61 WDAALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSE 120
Query: 112 MYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIF 171
MYSLLLETYI+D EK+RLF AIETVP V +KA WA+ WIDG E FAERL+AFACVEGIF
Sbjct: 121 MYSLLLETYIRDGTEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 180
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ +V +
Sbjct: 181 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVAD 240
Query: 232 AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISL 291
AV+IEREFVCDALP ALVGMNG LMSQYIEFVADRLL ALG+ K+Y VANPFDWMELISL
Sbjct: 241 AVDIEREFVCDALPVALVGMNGGLMSQYIEFVADRLLMALGHRKMYNVANPFDWMELISL 300
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGN-GGNHVFKIDEDF 329
QGKTNFFEKRVGEYQKASVMSSLNG NH F IDEDF
Sbjct: 301 QGKTNFFEKRVGEYQKASVMSSLNGGAAANHTFSIDEDF 339
>gi|218197485|gb|EEC79912.1| hypothetical protein OsI_21460 [Oryza sativa Indica Group]
Length = 345
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/326 (83%), Positives = 291/326 (89%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
EEPLLA + DRF MFPI+YPQIWE YKKA ASFWTAEEVDLS D RHW+A L+ DE+HFV
Sbjct: 20 EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFV 79
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSEMYSLLLETYI+D
Sbjct: 80 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 139
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+RLF AI+TVP V +KA WA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 140 AEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 199
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ +V +AV+IEREFVCDAL
Sbjct: 200 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVQEIVADAVDIEREFVCDAL 259
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P ALVGMNGELMSQYIEFVADRLL ALG K+Y VANPFDWMELISLQGKTNFFEKRVG+
Sbjct: 260 PVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGD 319
Query: 305 YQKASVMSSLNGNGG-NHVFKIDEDF 329
YQKASVMSSLNG NHVF IDEDF
Sbjct: 320 YQKASVMSSLNGGASCNHVFSIDEDF 345
>gi|115466138|ref|NP_001056668.1| Os06g0127900 [Oryza sativa Japonica Group]
gi|55296211|dbj|BAD67929.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|113594708|dbj|BAF18582.1| Os06g0127900 [Oryza sativa Japonica Group]
gi|186920368|gb|ACC95437.1| ribonucleotide diphosphate reductase small subunit 2 [Oryza sativa
Japonica Group]
gi|215706414|dbj|BAG93270.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222634884|gb|EEE65016.1| hypothetical protein OsJ_19968 [Oryza sativa Japonica Group]
Length = 345
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/326 (83%), Positives = 291/326 (89%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
EEPLLA + DRF MFPI+YPQIWE YKKA ASFWTAEEVDLS D RHW+A L+ DE+HFV
Sbjct: 20 EEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFV 79
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSEMYSLLLETYI+D
Sbjct: 80 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDD 139
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+RLF AI+TVP V +KA WA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 140 VEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 199
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ +V +AV+IEREFVCDAL
Sbjct: 200 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVQEIVADAVDIEREFVCDAL 259
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P ALVGMNGELMSQYIEFVADRLL ALG K+Y VANPFDWMELISLQGKTNFFEKRVG+
Sbjct: 260 PVALVGMNGELMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGD 319
Query: 305 YQKASVMSSLNGNGG-NHVFKIDEDF 329
YQKASVMSSLNG NHVF IDEDF
Sbjct: 320 YQKASVMSSLNGGASCNHVFSIDEDF 345
>gi|212274629|ref|NP_001130908.1| uncharacterized protein LOC100192012 [Zea mays]
gi|195636980|gb|ACG37958.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/339 (80%), Positives = 293/339 (86%), Gaps = 10/339 (2%)
Query: 1 MPSIP--------EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRH 52
MPS P +EPLLA + DRF MFPI+YPQIWE YKKA ASFWTAEEVDLS D RH
Sbjct: 1 MPSAPALVPACDMQEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARH 60
Query: 53 WEA-LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSE 111
W+A L+ DE+HF++HVLAFFAASDGIVLENLA RFM++VQ AEARAFYGFQIAIENIHSE
Sbjct: 61 WDAALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQAAEARAFYGFQIAIENIHSE 120
Query: 112 MYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIF 171
MYSLLLETYI+D EK+RLF AIETVP V +KA WA+ WIDG E FAERL+AFACVEGIF
Sbjct: 121 MYSLLLETYIRDGTEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 180
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ +V +
Sbjct: 181 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVAD 240
Query: 232 AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISL 291
AV+IEREFVCDALP ALVGMNG LMSQYIEFVADRLL ALG+ K+Y VANPFDWMELISL
Sbjct: 241 AVDIEREFVCDALPVALVGMNGGLMSQYIEFVADRLLMALGHRKMYNVANPFDWMELISL 300
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGN-GGNHVFKIDEDF 329
QGKTNFFEKRVGEYQKASVMSSLNG NH F IDEDF
Sbjct: 301 QGKTNFFEKRVGEYQKASVMSSLNGGAAANHTFSIDEDF 339
>gi|242076364|ref|XP_002448118.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
gi|241939301|gb|EES12446.1| hypothetical protein SORBIDRAFT_06g021460 [Sorghum bicolor]
Length = 339
Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/326 (82%), Positives = 291/326 (89%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
EEPLLA + DRF MFPI++PQIWE YKKA ASFWTAEEVDLS D RHW+A L+ DE+HF+
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFI 73
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSEMYSLLLETYI+D
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDG 133
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+RLF AIETVP V +KA WA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 134 AEKDRLFRAIETVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ +V +AV+IEREFVCDAL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDESRVREIVADAVDIEREFVCDAL 253
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P ALVGMNG LMSQYIEFVADRLL ALG+ K+Y VANPFDWMELISLQGKTNFFEKRVGE
Sbjct: 254 PVALVGMNGALMSQYIEFVADRLLMALGHKKMYNVANPFDWMELISLQGKTNFFEKRVGE 313
Query: 305 YQKASVMSSLNGN-GGNHVFKIDEDF 329
YQKASVMSSL+G NH+F IDEDF
Sbjct: 314 YQKASVMSSLSGGAAANHIFSIDEDF 339
>gi|52077136|dbj|BAD46182.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|52077275|dbj|BAD46317.1| putative ribonucleotide reductase R2 [Oryza sativa Japonica Group]
gi|186920364|gb|ACC95435.1| ribonucleotide diphosphate reductase small subunit 1 [Oryza sativa
Japonica Group]
Length = 339
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/339 (79%), Positives = 295/339 (87%), Gaps = 10/339 (2%)
Query: 1 MPSIP--------EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRH 52
MP+ P EEPLLA + +RF MFPI+YPQIWE YKKA ASFWTAEEVDLS D RH
Sbjct: 1 MPAAPTLVPACDLEEPLLAESSERFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSADARH 60
Query: 53 WEA-LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSE 111
W+A L+ DE+HF++HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSE
Sbjct: 61 WDAALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSE 120
Query: 112 MYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIF 171
MYSLLLETYI+D EK+RLF AI+TVP V +KA WA+ WIDG E FAERL+AFACVEGIF
Sbjct: 121 MYSLLLETYIRDGAEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 180
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ +V +
Sbjct: 181 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDLLRGKLDEARVREIVAD 240
Query: 232 AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISL 291
AV+IEREFVCDALP ALVGMNG+LMSQYIEFVADRLL ALG K+Y VANPFDWMELISL
Sbjct: 241 AVDIEREFVCDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVANPFDWMELISL 300
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGNG-GNHVFKIDEDF 329
QGKTNFFEKRVG+YQKASVMSSLNG NHVF IDEDF
Sbjct: 301 QGKTNFFEKRVGDYQKASVMSSLNGGASANHVFSIDEDF 339
>gi|302783485|ref|XP_002973515.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
gi|302787555|ref|XP_002975547.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
gi|300156548|gb|EFJ23176.1| hypothetical protein SELMODRAFT_175019 [Selaginella moellendorffii]
gi|300158553|gb|EFJ25175.1| hypothetical protein SELMODRAFT_173451 [Selaginella moellendorffii]
Length = 347
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 259/325 (79%), Positives = 292/325 (89%), Gaps = 1/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEP+LA NP RFCMFPI+YP++WEMYKKAEASFWTAEEVDLSQD +HWE+LT +EKHFV+
Sbjct: 23 EEPILADNPQRFCMFPIRYPRVWEMYKKAEASFWTAEEVDLSQDAKHWESLTDNEKHFVS 82
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM E+Q+ EARAFYGFQIAIENIHSEMYSLLLETYIKD++
Sbjct: 83 HVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDNE 142
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF+AIET+PCVAKKA WAL WID S++FAER++AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 143 VKAKLFNAIETIPCVAKKADWALRWIDSSQSFAERIVAFACVEGIFFSGSFCAIFWLKKR 202
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL KL E+RVK +V +AVEIER+FVC+AL
Sbjct: 203 GLMPGLTFSNELISRDEGLHCDFACLLYSLLNVKLDEKRVKEIVSDAVEIERQFVCEALS 262
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C LVGMN LMSQYI+FVADRL+ LGY KL+ NPFDWM+LISLQGKTNFFEKRVGEY
Sbjct: 263 CDLVGMNARLMSQYIDFVADRLMVVLGYNKLFNAINPFDWMDLISLQGKTNFFEKRVGEY 322
Query: 306 QKASVMSSL-NGNGGNHVFKIDEDF 329
QKASVM+ + N +HVFK+D+DF
Sbjct: 323 QKASVMAKVSNPEADHHVFKLDDDF 347
>gi|168049349|ref|XP_001777126.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671569|gb|EDQ58119.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 325
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/326 (80%), Positives = 292/326 (89%), Gaps = 1/326 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +EP+LA NP RFCMFPI+YPQ+WEMYKKAEASFWTAEEVDLS DL+HWEALT +E+HF
Sbjct: 1 MEQEPILAENPGRFCMFPIKYPQVWEMYKKAEASFWTAEEVDLSADLKHWEALTDNERHF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIVLENLA RFM E+Q+ EARAFYGFQIAIENIHSEMYSLLLE YIKD
Sbjct: 61 ISHVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKD 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK+RLF+AIET+PCV +KA WAL WID S +FAER++AFACVEGIFFSGSFC+IFWLK
Sbjct: 121 QSEKHRLFNAIETIPCVTRKAEWALKWIDSSGSFAERILAFACVEGIFFSGSFCSIFWLK 180
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLHCDFACLLY+LL KLSE+RV +V EAV+IEREFVC+A
Sbjct: 181 KRGLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLSEDRVHEIVCEAVDIEREFVCEA 240
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
L C LVGMN +MS+YI+FVADRLL +LGY K Y NPFDWMELISLQGKTNFFEKRVG
Sbjct: 241 LSCDLVGMNKIMMSEYIDFVADRLLVSLGYNKRYNARNPFDWMELISLQGKTNFFEKRVG 300
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQKASVMS LNG G NHVF++DEDF
Sbjct: 301 EYQKASVMSHLNG-GDNHVFRLDEDF 325
>gi|212723480|ref|NP_001131892.1| uncharacterized protein LOC100193273 [Zea mays]
gi|194692834|gb|ACF80501.1| unknown [Zea mays]
gi|195624040|gb|ACG33850.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|413944298|gb|AFW76947.1| Ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/339 (79%), Positives = 295/339 (87%), Gaps = 10/339 (2%)
Query: 1 MPSIPE--------EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRH 52
MPS P EPLLA + DRF MFPI++PQIWE YKKA ASFWTAEEVDLS D RH
Sbjct: 1 MPSTPTLVPPCDAVEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARH 60
Query: 53 W-EALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSE 111
W EAL+ DE+HF++HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSE
Sbjct: 61 WDEALSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSE 120
Query: 112 MYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIF 171
MYSLLLETYI+D EK+RLF AI+TVP V +KA WA+ WIDG E FAERL+AFACVEGIF
Sbjct: 121 MYSLLLETYIRDDVEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIF 180
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY +LR+KL E RV+ +V +
Sbjct: 181 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYDVLRSKLDEARVRTIVAD 240
Query: 232 AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISL 291
AV+IEREFVCDALP +LVGMNG+LMSQYIEFVADRLL ALG K+Y V NPFDWMELISL
Sbjct: 241 AVDIEREFVCDALPVSLVGMNGDLMSQYIEFVADRLLMALGCKKMYNVTNPFDWMELISL 300
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGN-GGNHVFKIDEDF 329
QGKTNFFEKRVG+YQKASVM+SLNG+ NHVF IDEDF
Sbjct: 301 QGKTNFFEKRVGDYQKASVMNSLNGSAAANHVFSIDEDF 339
>gi|242095388|ref|XP_002438184.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
gi|241916407|gb|EER89551.1| hypothetical protein SORBIDRAFT_10g009290 [Sorghum bicolor]
Length = 339
Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/330 (80%), Positives = 291/330 (88%), Gaps = 2/330 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P EEPLLA + DRF MFPI++PQIWE YKKA ASFWTAEEVDLS D RHW EAL+ DE
Sbjct: 10 PCDAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDEALSPDE 69
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 70 RHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 129
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
I+D EK+RLF AI+TVP V +KA WA+ WIDG E FAERL+AFACVEGIFFSGSFCAIF
Sbjct: 130 IRDDAEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIF 189
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR+KL E RV+ +V +AV+IEREFV
Sbjct: 190 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYELLRSKLDEARVREIVADAVDIEREFV 249
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG LMSQYIEFVADRLL ALG K+Y NPFDWMELISLQGKTNFFEK
Sbjct: 250 CDALPVALVGMNGGLMSQYIEFVADRLLMALGCKKMYNATNPFDWMELISLQGKTNFFEK 309
Query: 301 RVGEYQKASVMSSLNGN-GGNHVFKIDEDF 329
RVG+YQKASVM+SLNG+ NHVF IDEDF
Sbjct: 310 RVGDYQKASVMNSLNGSAAANHVFSIDEDF 339
>gi|413953641|gb|AFW86290.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/330 (80%), Positives = 291/330 (88%), Gaps = 2/330 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P EEPLLA + DRF MFPI++PQIWE YKKA ASFWTAEEVDLS D RHW EAL+ DE
Sbjct: 10 PCDAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSADARHWDEALSPDE 69
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIVLENLA RFMT+VQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 70 RHFISHVLAFFAASDGIVLENLASRFMTDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 129
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
I+D EK+RLF AI+TVP V +KA WA+ WIDG E FAER++AFACVEGIFFSGSFCAIF
Sbjct: 130 IRDHVEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERIVAFACVEGIFFSGSFCAIF 189
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ +V +AV+IEREFV
Sbjct: 190 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYELLRNKLDEARVREIVADAVDIEREFV 249
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG+LMSQYIEFVADRLL ALG K+Y V NPFDWMELISL GKTNFFEK
Sbjct: 250 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVTNPFDWMELISLMGKTNFFEK 309
Query: 301 RVGEYQKASVMSSLNGNG-GNHVFKIDEDF 329
RVG+YQKASVM+SLNG G +HVF IDEDF
Sbjct: 310 RVGDYQKASVMNSLNGGGAADHVFSIDEDF 339
>gi|357124601|ref|XP_003563986.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
[Brachypodium distachyon]
Length = 339
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/326 (80%), Positives = 290/326 (88%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
EEPLLA + DRF MFPI++PQIWE YKKA ASFWTAEEVDLS D RHW+ L+ DE+HFV
Sbjct: 14 EEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVDLSSDARHWDTTLSNDERHFV 73
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSEMYSLL+ETYI++
Sbjct: 74 SHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLIETYIRED 133
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+RLF A++T+P V +KA WA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKK
Sbjct: 134 VEKDRLFRAVDTIPAVRRKAEWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKK 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLY +LR+KL E RV+ +V +AV+IEREFVCDAL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLLYDILRSKLDESRVREIVGDAVDIEREFVCDAL 253
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCALVGMNG+LMSQYIEFVADRLL ALG K+Y NPFDWMELISLQGKTNFFEKRVG+
Sbjct: 254 PCALVGMNGDLMSQYIEFVADRLLMALGCKKMYNATNPFDWMELISLQGKTNFFEKRVGD 313
Query: 305 YQKASVMSSLNGNGG-NHVFKIDEDF 329
YQKASVMS+LNG NHVF IDEDF
Sbjct: 314 YQKASVMSNLNGGAATNHVFSIDEDF 339
>gi|168031987|ref|XP_001768501.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680214|gb|EDQ66652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 331
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/325 (80%), Positives = 290/325 (89%), Gaps = 1/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L NP+RF MFPI+YPQ+WEMYKKAEASFWTAEEVDLS D +HWE LT DE+HF++
Sbjct: 7 KEPILVENPNRFTMFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWETLTDDERHFIS 66
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM E+Q+ EARAFYGFQIAIENIHSEMYSLLLE YIKD
Sbjct: 67 HVLAFFAASDGIVLENLAVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDQA 126
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIET+PCVA+KA WAL WID + +FAER++AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 127 EKSRLFNAIETIPCVARKADWALKWIDSAGSFAERILAFACVEGIFFSGSFCAIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLY+LL KLSEERV +V EAVEIEREFVC+AL
Sbjct: 187 GLMPGLTFSNELISRDEGLHCDFACLLYTLLINKLSEERVYEIVCEAVEIEREFVCEALS 246
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C LVGMN LMS+YI+FVADRLL +LGY K Y NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 247 CDLVGMNKILMSEYIDFVADRLLVSLGYRKKYNALNPFDWMELISLQGKTNFFEKRVGEY 306
Query: 306 QKASVMSSLN-GNGGNHVFKIDEDF 329
QKASVMS+LN G+ NHVF++DEDF
Sbjct: 307 QKASVMSNLNGGDTNNHVFRLDEDF 331
>gi|357111351|ref|XP_003557477.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
isoform 1 [Brachypodium distachyon]
gi|357111353|ref|XP_003557478.1| PREDICTED: ribonucleoside-diphosphate reductase small chain-like
isoform 2 [Brachypodium distachyon]
Length = 336
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/336 (78%), Positives = 290/336 (86%), Gaps = 7/336 (2%)
Query: 1 MPSIP-----EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-E 54
MP+ P EEPLLA + DRF MFPI+YPQIWE YKKA ASFWTAEEVDLS D RHW E
Sbjct: 1 MPAAPNLVDAEEPLLAESSDRFSMFPIRYPQIWEFYKKAVASFWTAEEVDLSSDARHWDE 60
Query: 55 ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYS 114
L+ DE+HF++HVLAFFAASDGIVLENLA RFM++VQVAEARAFYGFQIAIENIHSEMYS
Sbjct: 61 TLSPDERHFISHVLAFFAASDGIVLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYS 120
Query: 115 LLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSG 174
LLLETYI+D+ EK+RLF A++TVP V +KA W++ WI+G E FAERL+AFACVEGIFFSG
Sbjct: 121 LLLETYIRDAAEKDRLFRAVDTVPAVRRKAVWSMRWIEGGERFAERLVAFACVEGIFFSG 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVE 234
SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LL KL E RV+ +V +AV+
Sbjct: 181 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYELLNGKLEESRVREIVADAVD 240
Query: 235 IEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGK 294
IEREF+CDALPCALVGMN LM QYIEFVADRLL ALG K+Y NPFDWMELISLQGK
Sbjct: 241 IEREFICDALPCALVGMNAGLMGQYIEFVADRLLTALGCSKMYNAVNPFDWMELISLQGK 300
Query: 295 TNFFEKRVGEYQKASVMSSLNGNGG-NHVFKIDEDF 329
TNFFEKRVG+YQKASVMS+LNG NHVF IDEDF
Sbjct: 301 TNFFEKRVGDYQKASVMSNLNGGAATNHVFSIDEDF 336
>gi|226528734|ref|NP_001150842.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
gi|195642302|gb|ACG40619.1| ribonucleoside-diphosphate reductase small chain [Zea mays]
Length = 339
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 265/330 (80%), Positives = 289/330 (87%), Gaps = 2/330 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P EEPLLA + DRF MFPI++PQIWE YKKA ASFWTAEEV LS D RHW EAL+ DE
Sbjct: 10 PCDAEEPLLAESSDRFSMFPIRFPQIWEFYKKAVASFWTAEEVGLSADARHWDEALSPDE 69
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIVLENLA RFMT+VQVAEARAFYGFQIAIENIHSEMYSLLLETY
Sbjct: 70 RHFISHVLAFFAASDGIVLENLASRFMTDVQVAEARAFYGFQIAIENIHSEMYSLLLETY 129
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
I+D EK+RLF AI+TVP V +KA WA+ WIDG E FAER++AFACVEGIFFSGSFCAIF
Sbjct: 130 IRDHVEKDRLFRAIDTVPAVRRKADWAMRWIDGGERFAERIVAFACVEGIFFSGSFCAIF 189
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY LLR KL E RV+ +V +AV+IEREFV
Sbjct: 190 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYELLRNKLDEARVREIVADAVDIEREFV 249
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALP ALVGMNG+LMSQYIEFVADRLL ALG K+Y V NPFDWMELISL GKTNFFEK
Sbjct: 250 CDALPVALVGMNGDLMSQYIEFVADRLLMALGCKKMYNVTNPFDWMELISLMGKTNFFEK 309
Query: 301 RVGEYQKASVMSSLNGN-GGNHVFKIDEDF 329
RVG+YQKASVM+SLNG +HVF IDEDF
Sbjct: 310 RVGDYQKASVMNSLNGGAAADHVFSIDEDF 339
>gi|168015485|ref|XP_001760281.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688661|gb|EDQ75037.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 330
Score = 545 bits (1405), Expect = e-153, Method: Compositional matrix adjust.
Identities = 260/325 (80%), Positives = 288/325 (88%), Gaps = 1/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEP+L NP+RF MFPI+YPQ+WEMYKKAEASFWTAEEVDLS D +HWEALT +E+HF++
Sbjct: 6 EEPILMENPNRFTMFPIKYPQVWEMYKKAEASFWTAEEVDLSADSKHWEALTDNERHFIS 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM E+Q+ EARAFYGFQIAIENIHSEMYSLLLE YIKD
Sbjct: 66 HVLAFFAASDGIVLENLAIRFMKEIQIPEARAFYGFQIAIENIHSEMYSLLLEAYIKDHA 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKNRLF+AIET+PCV KKA WAL WI + +FAER++AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 126 EKNRLFNAIETIPCVTKKAEWALKWIHSAGSFAERILAFACVEGIFFSGSFCAIFWLKKR 185
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLY+LL KLSE+RV +V EAV IE+EFVC+AL
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYTLLNNKLSEDRVYEIVCEAVVIEQEFVCEALS 245
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C LVGMN LMS+YI+FVADRLL +LGY K Y NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 246 CDLVGMNKTLMSEYIDFVADRLLVSLGYPKKYNSHNPFDWMELISLQGKTNFFEKRVGEY 305
Query: 306 QKASVMSSLNGN-GGNHVFKIDEDF 329
QKASVMS+LNGN NHVF++DEDF
Sbjct: 306 QKASVMSNLNGNDANNHVFRLDEDF 330
>gi|351721787|ref|NP_001237733.1| ribonucleotide reductase small subunit [Glycine max]
gi|4894211|gb|AAD32302.1| ribonucleotide reductase small subunit [Glycine max]
Length = 339
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 256/324 (79%), Positives = 284/324 (87%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L RFCMFPI+Y QIWEMYKKAEASFWTAEEVDLS D++HWE L+ EKHF+T
Sbjct: 16 QEPILMEQSQRFCMFPIRYKQIWEMYKKAEASFWTAEEVDLSYDVQHWETLSVSEKHFIT 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RF+++VQ+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 76 HVLAFFAASDGIVLENLAARFLSDVQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSR 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF+AIE +PCVA+KA WAL+WI S +FAERL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKHKLFNAIENLPCVARKAEWALSWIHSSTSFAERLVAFACVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLLR L ++V LV EAVEIE EFVCDALP
Sbjct: 196 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKPLISDQVHKLVHEAVEIETEFVCDALP 255
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN LMSQYI+FVADRLL ALGY + Y V NPFDWME ISLQGK NFFE+RVG+Y
Sbjct: 256 CALIGMNSVLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFISLQGKANFFERRVGDY 315
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKASVMSSL G N VFK+DEDF
Sbjct: 316 QKASVMSSLQDAGKNFVFKLDEDF 339
>gi|255551489|ref|XP_002516790.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
gi|223543878|gb|EEF45404.1| ribonucleoside-diphosphate reductase small chain, putative [Ricinus
communis]
Length = 342
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 252/322 (78%), Positives = 282/322 (87%)
Query: 8 PLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHV 67
P+L RFCMFPI+Y +WEMYKKAEASFWTAEEVDLSQD++ WE L+ EKHF++HV
Sbjct: 21 PILKEQNQRFCMFPIRYKSLWEMYKKAEASFWTAEEVDLSQDVQQWETLSVSEKHFISHV 80
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
LAFFAASDGIVLENLA RF+ ++QV EARAFYGFQIA+ENIHSEMYSLLLETYIKDS EK
Sbjct: 81 LAFFAASDGIVLENLAARFLNDIQVPEARAFYGFQIAMENIHSEMYSLLLETYIKDSREK 140
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
NRLF+AIET+PCVA+KA WAL+WI S +AERL+AFACVEGIFFSGSFCAIFWLKKRGL
Sbjct: 141 NRLFNAIETIPCVARKAKWALDWIHSSSLYAERLVAFACVEGIFFSGSFCAIFWLKKRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEGLHCDFACLLYSLL+ +L ++V+ +V EAVEIE EFVCDALPCA
Sbjct: 201 MPGLTFSNELISRDEGLHCDFACLLYSLLQKQLQWQKVQQIVHEAVEIETEFVCDALPCA 260
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN LMSQYI+FVADRLL ALGY + Y V NPFDWME ISLQGK NFFE+RVG+YQK
Sbjct: 261 LIGMNSTLMSQYIKFVADRLLVALGYQRKYNVENPFDWMEFISLQGKANFFERRVGDYQK 320
Query: 308 ASVMSSLNGNGGNHVFKIDEDF 329
ASVMSSL G N VFK+DEDF
Sbjct: 321 ASVMSSLQDGGKNFVFKMDEDF 342
>gi|388508294|gb|AFK42213.1| unknown [Lotus japonicus]
Length = 351
Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust.
Identities = 251/324 (77%), Positives = 282/324 (87%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDL+ D++HW L+ EKHF+T
Sbjct: 28 QEPILMEQTQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLTYDVQHWATLSNSEKHFIT 87
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RF+ +VQ+ EARAFYGFQIA+ENIHSEMYSLLLET IKDS
Sbjct: 88 HVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSR 147
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIE +PCVA+KA WALNWI+ S +FAERL+AFAC+EGIFFSGSFC+IFWLKKR
Sbjct: 148 EKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEGIFFSGSFCSIFWLKKR 207
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ L ERV +V EAVEIE EFVC+ALP
Sbjct: 208 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQRPLDSERVHHIVHEAVEIETEFVCEALP 267
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN LMSQYI+FVADRLL +LGY K Y V NPFDWME ISLQGK NFFE+RVGEY
Sbjct: 268 CALIGMNSTLMSQYIKFVADRLLVSLGYQKKYNVENPFDWMEFISLQGKANFFERRVGEY 327
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKASVMSSL G N VFK+DEDF
Sbjct: 328 QKASVMSSLQDAGKNFVFKLDEDF 351
>gi|225432510|ref|XP_002279943.1| PREDICTED: ribonucleoside-diphosphate reductase small chain A
[Vitis vinifera]
Length = 340
Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust.
Identities = 252/324 (77%), Positives = 286/324 (88%), Gaps = 1/324 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEP+L N RFCMFPI+Y Q+WEMYKKAEASFWTAEEVDLS D++ WE+L+ EKHF++
Sbjct: 18 EEPILMKNSQRFCMFPIRYRQLWEMYKKAEASFWTAEEVDLSHDVQQWESLSNSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 78 HVLAFFAASDGIVLENLAARFLHDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSK 137
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIE++ CVA KA WAL+WI S FAERLIAFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKHRLFNAIESISCVAGKAKWALDWIQSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L ++V +V EAVEIE +FVC+ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPWQKVHHIVHEAVEIETQFVCEALP 257
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN LMSQYI+FVADRLL ALGY + Y V NPFDWME ISLQGK NFFE+RVG+Y
Sbjct: 258 CALIGMNATLMSQYIKFVADRLLVALGYERKYNVENPFDWMEFISLQGKANFFERRVGDY 317
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKAS+MSSL+G G N+VFKIDEDF
Sbjct: 318 QKASIMSSLDG-GKNYVFKIDEDF 340
>gi|224100309|ref|XP_002311826.1| predicted protein [Populus trichocarpa]
gi|222851646|gb|EEE89193.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 248/324 (76%), Positives = 283/324 (87%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L RFCMFPI+Y ++WEMYKKAEASFWTAEEVDLS+D++ WEAL+ EKHF++
Sbjct: 19 QEPILKEQNQRFCMFPIRYKELWEMYKKAEASFWTAEEVDLSRDMQQWEALSDSEKHFIS 78
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RF+ +VQ+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS
Sbjct: 79 HVLAFFAASDGIVLENLAARFLYDVQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSR 138
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIE +PCVA+KA WAL+WI S FAERL+AFAC+EGIFFSGSFCAIFWLKKR
Sbjct: 139 EKHRLFNAIENIPCVAEKAKWALDWIQSSMVFAERLVAFACIEGIFFSGSFCAIFWLKKR 198
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L ++V +V EAVEIE +FVC+ALP
Sbjct: 199 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQRQLHWQKVYHIVGEAVEIETKFVCEALP 258
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN LM YI+FVADRLL ALGY K Y V NPFDWME ISLQGK NFFE+RVG+Y
Sbjct: 259 CALIGMNATLMGDYIKFVADRLLVALGYQKKYNVENPFDWMEFISLQGKANFFERRVGDY 318
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKASVMSSL G N+VFK+DEDF
Sbjct: 319 QKASVMSSLQDGGKNYVFKMDEDF 342
>gi|145349720|ref|XP_001419276.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579507|gb|ABO97569.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 329
Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust.
Identities = 248/330 (75%), Positives = 278/330 (84%), Gaps = 2/330 (0%)
Query: 1 MPSIP-EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTAD 59
M +P EPLL N RF MFPIQYPQ+WEMYKKAEASFWTAEEVDLS D++HWE LT D
Sbjct: 1 MSPLPLAEPLLDENDQRFTMFPIQYPQVWEMYKKAEASFWTAEEVDLSDDMKHWETLTKD 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
EKHFV+HVLAFFAASDGIVLENL RFM EVQ+ EARAFYGFQIAIENIHSEMYSLL++
Sbjct: 61 EKHFVSHVLAFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDQ 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD EK+ LF AI+T+PCV KKA WAL WID S++FAERL+AFAC+EGIFFSGSFC+I
Sbjct: 121 YIKDPVEKDHLFRAIDTIPCVKKKADWALKWIDSSDSFAERLLAFACIEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
+WLKKRGLMPGLTFSNELISRDEGLH DFACLL+S+L K SEE ++ +V EAVEIE+EF
Sbjct: 181 YWLKKRGLMPGLTFSNELISRDEGLHRDFACLLFSMLNNKPSEETIRKIVTEAVEIEKEF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
VCD+LPCALVGMN +MS YIE+VAD L +LG K Y NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDSLPCALVGMNAGMMSDYIEYVADHLFCSLGLAKEYNTTNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
KRVGEYQKA VM+S+ G N F +DEDF
Sbjct: 301 KRVGEYQKAGVMNSIGGGNAN-AFSLDEDF 329
>gi|307110551|gb|EFN58787.1| hypothetical protein CHLNCDRAFT_34102 [Chlorella variabilis]
Length = 335
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 248/324 (76%), Positives = 275/324 (84%), Gaps = 1/324 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLLA N DRF MFPI+Y IWEMYKKAEASFWTAEEVDL D++ WE L+ DE+HFV+
Sbjct: 13 QEPLLASNDDRFVMFPIKYRDIWEMYKKAEASFWTAEEVDLGSDVKDWERLSDDERHFVS 72
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RFM EVQV EARAFYGFQIA+ENIHSEMYSLLLE YIKD
Sbjct: 73 HVLAFFAASDGIVNENLGARFMQEVQVPEARAFYGFQIAMENIHSEMYSLLLEAYIKDPK 132
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LFHAI+TVP V KKA WAL WI+GS+ F+ERLIAFACVEGIFFSGSFC+IFWLKKR
Sbjct: 133 EKDKLFHAIDTVPVVRKKAHWALKWINGSDLFSERLIAFACVEGIFFSGSFCSIFWLKKR 192
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACLLY + +LSEERV +V +AVEIE+EF+CDALP
Sbjct: 193 GLMPGLTFSNELISRDEGLHTDFACLLYRHIHNRLSEERVAEIVTQAVEIEKEFICDALP 252
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL ALG K+Y V+NPFDWMELISLQGKTNFFEKRVG+Y
Sbjct: 253 VDLIGMNSRLMGQYIEFVADRLLVALGNPKVYNVSNPFDWMELISLQGKTNFFEKRVGDY 312
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM+ L G+ NH DEDF
Sbjct: 313 QKAGVMNGL-GSNDNHAIAFDEDF 335
>gi|15229476|ref|NP_189000.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
thaliana]
gi|27735240|sp|P50651.2|RIR2A_ARATH RecName: Full=Ribonucleoside-diphosphate reductase small chain A;
AltName: Full=Ribonucleoside-diphosphate reductase R2A
subunit; Short=AtRNR2; Short=Protein R2at; AltName:
Full=Ribonucleotide reductase small subunit A
gi|13937232|gb|AAK50108.1|AF372971_1 AT3g23580/MDB19_7 [Arabidopsis thaliana]
gi|9294514|dbj|BAB02776.1| ribonucleotide reductase [Arabidopsis thaliana]
gi|23505945|gb|AAN28832.1| At3g23580/MDB19_7 [Arabidopsis thaliana]
gi|332643258|gb|AEE76779.1| Ribonucleoside-diphosphate reductase small chain A [Arabidopsis
thaliana]
Length = 341
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/324 (75%), Positives = 273/324 (84%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++ WEALT EKHF++
Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS
Sbjct: 78 HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L E+V +V EAVEIE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADRLL LG + Y NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341
>gi|255079598|ref|XP_002503379.1| predicted protein [Micromonas sp. RCC299]
gi|226518645|gb|ACO64637.1| predicted protein [Micromonas sp. RCC299]
Length = 335
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/323 (75%), Positives = 269/323 (83%), Gaps = 2/323 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL PN DRF MFPI+Y IWEMYKKAEASFWTAEEVDLS D+ HW L DEKHF+ H
Sbjct: 15 EPLLDPNDDRFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMVHWNKLNNDEKHFIKH 74
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIVLENL RFM EVQ EARAFYGFQIAIENIHSEMYSLL++ Y+KD+ E
Sbjct: 75 ILAFFAASDGIVLENLGVRFMGEVQFPEARAFYGFQIAIENIHSEMYSLLIDAYVKDAQE 134
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF AI+ +PC+AKKA WA WI+ S FAERLIAFAC+EGIFFSGSFC+I+WLKKRG
Sbjct: 135 KTYLFQAIQNIPCIAKKADWAFKWIESSADFAERLIAFACIEGIFFSGSFCSIYWLKKRG 194
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLLYS + K +E V+ +VKEAVEIE+EFVCDALPC
Sbjct: 195 LMPGLTFSNELISRDEGLHRDFACLLYSYINKKPNESVVRQIVKEAVEIEKEFVCDALPC 254
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
ALVGMN +LMS+YIEFVAD LLG LG K Y ANPFDWMELISLQGKTNFFEKRVGEYQ
Sbjct: 255 ALVGMNADLMSEYIEFVADHLLGQLGMSKEYNAANPFDWMELISLQGKTNFFEKRVGEYQ 314
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+SLN F +DEDF
Sbjct: 315 KSGVMNSLNAEAAK--FSLDEDF 335
>gi|297831106|ref|XP_002883435.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
gi|297329275|gb|EFH59694.1| RNR2/RNR2A [Arabidopsis lyrata subsp. lyrata]
Length = 341
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 244/324 (75%), Positives = 273/324 (84%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++ WEALT EKHF++
Sbjct: 18 KEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET++KDS
Sbjct: 78 HVLAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFLKDSK 137
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L E+V +V EAVEIE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADRLL LG + Y NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERRYKAENPFDWMEFISLQGKTNFFEKRVGEY 317
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 318 QKASVMSNLQNGSKNYEFTTEEDF 341
>gi|159465835|ref|XP_001691128.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
reinhardtii]
gi|158279814|gb|EDP05574.1| ribonucleoside-diphosphate reductase small chain [Chlamydomonas
reinhardtii]
Length = 394
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 239/324 (73%), Positives = 276/324 (85%), Gaps = 2/324 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDRFCMFPI+YPQIWEMYKKAEASFWTAEEVDL D++HWE L+ E+HF++
Sbjct: 73 EEPLLDENPDRFCMFPIKYPQIWEMYKKAEASFWTAEEVDLGDDMKHWEKLSDGERHFIS 132
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM EVQ+ EARAFYGFQ+AIENIHSEMYSLLLE+YIKD
Sbjct: 133 HVLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLLLESYIKDPQ 192
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LFH+IETVPC+ KKA WA+ WI F+ERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 193 EKHKLFHSIETVPCIKKKAQWAMKWIGSDSVFSERLVAFAAVEGIFFSGSFCSIFWLKKR 252
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFAC+L+S+L T++ E RVK ++ EAVEIE+EF +ALP
Sbjct: 253 GLMPGLTFSNELISRDEGLHCDFACMLFSMLNTRIDETRVKQIIVEAVEIEQEFCTEALP 312
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM+QYI+FVADRLL +LG K Y V NPF++ME+ISLQGKTNFFEKRVG+Y
Sbjct: 313 VDLIGMNSRLMAQYIQFVADRLLVSLGCAKQYNVVNPFEFMEMISLQGKTNFFEKRVGDY 372
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM+ L G N F +DEDF
Sbjct: 373 QKNGVMAGLQGKVQN--FSMDEDF 394
>gi|302843870|ref|XP_002953476.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
nagariensis]
gi|300261235|gb|EFJ45449.1| hypothetical protein VOLCADRAFT_109884 [Volvox carteri f.
nagariensis]
Length = 400
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/323 (74%), Positives = 273/323 (84%), Gaps = 2/323 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NPDRFCMFPI+YP+IWEMYKKAEASFWTAEEVDL D++HWE L+ E+HF++H
Sbjct: 80 EPLLDENPDRFCMFPIKYPKIWEMYKKAEASFWTAEEVDLGDDMKHWEKLSDGERHFISH 139
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA RFM EVQ+ EARAFYGFQ+AIENIHSEMYSLLLETYIKD E
Sbjct: 140 VLAFFAASDGIVLENLAIRFMKEVQLPEARAFYGFQVAIENIHSEMYSLLLETYIKDPIE 199
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K++LFH+IETVPC+ KKA WA+ WI +F ERL+AFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 200 KHKLFHSIETVPCIKKKAQWAIKWIGSESSFPERLVAFAAVEGIFFSGSFCSIFWLKKRG 259
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACLLY +L +L E R+K ++ EAV+IE EF DALP
Sbjct: 260 LMPGLTFSNELISRDEGLHCDFACLLYGMLSKQLEESRIKEIICEAVDIENEFCTDALPV 319
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM+QYIEFVADRLL ALG K Y V NPFD+M++ISLQGKTNFFEKRVG+YQ
Sbjct: 320 DLIGMNSRLMAQYIEFVADRLLVALGCSKAYNVTNPFDFMDMISLQGKTNFFEKRVGDYQ 379
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ L G N F +DEDF
Sbjct: 380 KSGVMAGLQGKVQN--FSMDEDF 400
>gi|412991446|emb|CCO16291.1| Ribonucleoside-diphosphate reductase small chain, putative
[Bathycoccus prasinos]
Length = 330
Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust.
Identities = 240/333 (72%), Positives = 277/333 (83%), Gaps = 7/333 (2%)
Query: 1 MPSIPE---EPLLAPN-PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEAL 56
MPS + EPLL DRF +FP++Y +WEMYKKA+ASFWTAEEVDL D++HWE L
Sbjct: 1 MPSDEQQLAEPLLDDGGNDRFVLFPLKYDAVWEMYKKAQASFWTAEEVDLQDDMKHWEKL 60
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
TADEKHF++HVLAFFAASDGIVLENL RFM E+Q+ EARAFYGFQIAIENIHSEMYSLL
Sbjct: 61 TADEKHFISHVLAFFAASDGIVLENLGVRFMKEIQIPEARAFYGFQIAIENIHSEMYSLL 120
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSF 176
++ YIKD EK RLF+A++T+PCV KKA WAL WIDGSE+FAERL+AFACVEGIFFSGSF
Sbjct: 121 IDQYIKDPVEKTRLFNAVDTIPCVQKKAQWALKWIDGSESFAERLVAFACVEGIFFSGSF 180
Query: 177 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIE 236
C+I+WLKKRG+MPGLTFSNELISRDEGLH DFACLLY++L EE+++ +V EAVEIE
Sbjct: 181 CSIYWLKKRGMMPGLTFSNELISRDEGLHRDFACLLYTMLNNTPGEEKLRKIVTEAVEIE 240
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
+EFVCDALPCALVGMN ++M YIE+VAD LL LG+ K Y ANPFDWMELISLQGKTN
Sbjct: 241 KEFVCDALPCALVGMNADMMRDYIEYVADHLLSQLGFAKEYDTANPFDWMELISLQGKTN 300
Query: 297 FFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
FFEKRVGEYQK+ V G+G F +DEDF
Sbjct: 301 FFEKRVGEYQKSGVT---GGSGSMSTFALDEDF 330
>gi|840719|emb|CAA54549.1| ribonucleotide reductase R2 [Arabidopsis thaliana]
Length = 340
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 242/324 (74%), Positives = 270/324 (83%), Gaps = 1/324 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++ WEALT EKHF++
Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS
Sbjct: 78 HILAFFAASDGIVLENLA-RFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 136
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIET+PC++KKA W L+WI +FA RL+AFAC EGIFFSGSFCAIFWLKKR
Sbjct: 137 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACAEGIFFSGSFCAIFWLKKR 196
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL SLL+ + E+V +V EAVEIE EFVC ALP
Sbjct: 197 GLMPGLTFSNELISRDEGLHCDFACLLISLLQLHVPLEKVYQIVHEAVEIETEFVCKALP 256
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADRLL LG + Y NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 257 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 316
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 317 QKASVMSNLQNGNQNYEFTTEEDF 340
>gi|384251981|gb|EIE25458.1| ribonucleotide reductase [Coccomyxa subellipsoidea C-169]
Length = 330
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/328 (71%), Positives = 276/328 (84%), Gaps = 1/328 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P EPLLA NPDRFCMFPI+Y +WEMYKKAEASFWTAEEVDLS D W L++DEK
Sbjct: 4 PVQHHEPLLAENPDRFCMFPIKYSAVWEMYKKAEASFWTAEEVDLSSDYTDWMKLSSDEK 63
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HFV+H+LAFFA+SDGIVLENL+ RFM+E+Q+ EARAFYGFQIAIENIHSEMYSLLLETYI
Sbjct: 64 HFVSHILAFFASSDGIVLENLSQRFMSEIQIPEARAFYGFQIAIENIHSEMYSLLLETYI 123
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
KD EK+RLFHA+ETVP V +KA WAL W+ +FAERL+A+ CVEGIFFSGSFC+IFW
Sbjct: 124 KDPKEKHRLFHAMETVPAVKRKAEWALKWVGSQSSFAERLVAWGCVEGIFFSGSFCSIFW 183
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLM GLTFSNELISRDEGLHCDFACLLY+LL KL ++++ +++ EAV+IE++FVC
Sbjct: 184 LKKRGLMHGLTFSNELISRDEGLHCDFACLLYTLLNNKLDDDKLLSIITEAVDIEKDFVC 243
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN +LMS+YI+FVADRLL ALG K Y NPFDWME++SLQGKTNFFEKR
Sbjct: 244 EALPVDLIGMNKKLMSEYIDFVADRLLVALGQEKHYNTKNPFDWMEMLSLQGKTNFFEKR 303
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQKA VM+ L+ + H ++DF
Sbjct: 304 VGEYQKAGVMNGLSADAL-HSLSFNDDF 330
>gi|384252466|gb|EIE25942.1| ribonucleoside-diphosphate reductase small chain C [Coccomyxa
subellipsoidea C-169]
Length = 340
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/326 (71%), Positives = 273/326 (83%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL+PN DRF M+P++Y ++EMYKKA ASFWT EEVDLSQD+R WE L+ DE+HF+T
Sbjct: 15 DEPLLSPNGDRFVMYPVRYQGVFEMYKKAVASFWTVEEVDLSQDMRDWEKLSDDERHFIT 74
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV+ENLA RFM+EVQ+ EARAFYGFQIAIEN+HSEMYSLLL+ YI+D D
Sbjct: 75 HILAFFAASDGIVMENLAVRFMSEVQIPEARAFYGFQIAIENVHSEMYSLLLDHYIRDVD 134
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+K+++ AI+TVPCV KKA WA WI G E+FAERL+AFACVEGI FSGSFCAIFWLKKR
Sbjct: 135 QKDKMLRAIQTVPCVGKKAEWAQRWIGGGESFAERLVAFACVEGIHFSGSFCAIFWLKKR 194
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLYS L+ L + V +V+EAVE+E EF C+AL
Sbjct: 195 LLMPGLTFSNELISRDEGLHTDFACLLYSQLQHPLDQAAVYRIVREAVELEHEFCCEALS 254
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
CALVGMN +LM QYI++VADRLL ALG KLY ANPFDWME+ISLQGKTNFFE+RVGEY
Sbjct: 255 CALVGMNADLMRQYIDYVADRLLVALGCEKLYNTANPFDWMEMISLQGKTNFFERRVGEY 314
Query: 306 QKASVMSSLN--GNGGNHVFKIDEDF 329
Q+A VM+ G +VF +DEDF
Sbjct: 315 QRAGVMNGAQPAGERQAYVFTMDEDF 340
>gi|428182355|gb|EKX51216.1| hypothetical protein GUITHDRAFT_66373 [Guillardia theta CCMP2712]
Length = 327
Score = 490 bits (1261), Expect = e-136, Method: Compositional matrix adjust.
Identities = 231/325 (71%), Positives = 270/325 (83%), Gaps = 2/325 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL PNP+RF +FPI+Y +WEMYKK EASFWT EEVDLSQD+ HWE L +EKHF+ H
Sbjct: 3 EPLLTPNPNRFVLFPIKYHAVWEMYKKHEASFWTVEEVDLSQDMIHWEKLNDNEKHFIKH 62
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLAG F TE+Q+ EAR FYGFQIA+ENIHSEMYSLL++TY++D E
Sbjct: 63 VLAFFAASDGIVLENLAGNFSTEIQIPEARCFYGFQIAMENIHSEMYSLLIDTYVRDPVE 122
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K++LF AIETVP V KKA WA+ W+ +FA+RL+AFA VEGIFFSGSFCAIFWLKKRG
Sbjct: 123 KDKLFRAIETVPAVMKKADWAIRWMGEKCSFAKRLVAFAAVEGIFFSGSFCAIFWLKKRG 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGL FSNELISRDEGLH DFACL+YS+L KLS E V ++ EAV+ E +FV +ALP
Sbjct: 183 LMPGLCFSNELISRDEGLHTDFACLIYSMLENKLSTEEVTQIITEAVDCETQFVTEALPV 242
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +LMSQYIEFVADRLL ALG K+Y V+NPF+WM++ISLQGKTNFFEKRVG+YQ
Sbjct: 243 DLIGMNAQLMSQYIEFVADRLLVALGQPKVYKVSNPFEWMDMISLQGKTNFFEKRVGDYQ 302
Query: 307 KASVMSSLN--GNGGNHVFKIDEDF 329
KA VMSS+N GNH F ++ DF
Sbjct: 303 KAGVMSSINKETGQGNHCFSLEHDF 327
>gi|387789964|ref|YP_006255029.1| ribonucleotide reductase subunit beta [Solitalea canadensis DSM
3403]
gi|379652797|gb|AFD05853.1| ribonucleotide reductase, beta subunit [Solitalea canadensis DSM
3403]
Length = 323
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/324 (70%), Positives = 272/324 (83%), Gaps = 5/324 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL N +RF + PI+YP+IWEMYKKAEASFWTAEE+DLS DL+ WE E+HF++
Sbjct: 5 QEPLLQENKERFVLLPIKYPEIWEMYKKAEASFWTAEEIDLSLDLKDWENFNDGERHFIS 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA FM+EVQ+ EAR +YGFQI +ENIHSE Y+LL++TY+KD+
Sbjct: 65 HVLAFFAASDGIVNENLAVNFMSEVQIPEARCYYGFQIMMENIHSETYALLIDTYVKDTA 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKNRLF+AIETVPCV +KA WAL WI+ TFAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 EKNRLFNAIETVPCVKQKAEWALRWIENG-TFAERLVAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEG HC+FACLLYS+L KLSEERV ++ +AVEIE++F+ DALP
Sbjct: 184 GLMPGLTFSNELISRDEGSHCEFACLLYSMLINKLSEERVHQIITDAVEIEKQFITDALP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
AL+GMN +LM QYIEFVADR L ALGY K+Y NPFD+ME+ISLQGKTNFFEKRVG+Y
Sbjct: 244 VALIGMNAKLMQQYIEFVADRWLNALGYSKIYNATNPFDFMEMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK+ V+S + N +F +DEDF
Sbjct: 304 QKSGVLSDKDSN----IFSLDEDF 323
>gi|255530602|ref|YP_003090974.1| ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
2366]
gi|255343586|gb|ACU02912.1| Ribonucleoside-diphosphate reductase [Pedobacter heparinus DSM
2366]
Length = 324
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/324 (70%), Positives = 271/324 (83%), Gaps = 3/324 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EE LL N DRF + PI+YP+IWEMYKK+EASFWTAEE+DLS D +HW+ L E+HF++
Sbjct: 4 EEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHWDNLNDGERHFIS 63
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFF+ASDGIV ENLA FM+EVQ+ EAR FYGFQI +ENIHSE Y+LL++TYIKD D
Sbjct: 64 HILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYIKDPD 123
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLFHAIETVPCV KKA WAL WID +FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 124 EKDRLFHAIETVPCVKKKAEWALRWIDNG-SFAERLVAFAAVEGIFFSGSFCSIFWLKKR 182
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEG HC+FACLLY +L+ KLS+E+V ++++AVEIE+EFV DALP
Sbjct: 183 GLMPGLTFSNELISRDEGSHCEFACLLYGMLKNKLSQEQVHGIIRDAVEIEKEFVTDALP 242
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
AL+GMN +LMSQYIEFVADR L LGY K+Y NPFD+ME+ISLQGKTNFFEKRVG+Y
Sbjct: 243 VALIGMNAKLMSQYIEFVADRWLQELGYSKIYNATNPFDFMEMISLQGKTNFFEKRVGDY 302
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK+ V++S F +D+DF
Sbjct: 303 QKSGVLTSTEDKAA--AFSLDDDF 324
>gi|145352915|ref|XP_001420779.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581014|gb|ABO99072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 346
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 235/323 (72%), Positives = 263/323 (81%), Gaps = 3/323 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NPDRFC+FPI++ ++WEMYKKAEASFWTAEEVDL+ D R W L +E+HF++H
Sbjct: 27 EPLLRDNPDRFCLFPIKHAKVWEMYKKAEASFWTAEEVDLTYDYRDWITLNDNEQHFISH 86
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENL RFMT+VQ+ EAR+FYGFQ+AIENIHSEMYSLLL+TYIKD +
Sbjct: 87 VLAFFAASDGIVLENLCSRFMTDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKDPKK 146
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF AI TVP VAKKA WAL WI +FAERL+ FACVEGIFFSGSFCAIFWLKKRG
Sbjct: 147 KSDLFRAIHTVPTVAKKADWALKWIGSDASFAERLVGFACVEGIFFSGSFCAIFWLKKRG 206
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LM GLTFSNELISRDEGLHCDFACLLYS+L LSE+ + LV +AV IE+EFVCDAL C
Sbjct: 207 LMRGLTFSNELISRDEGLHCDFACLLYSMLENPLSEKVLHQLVGDAVTIEKEFVCDALSC 266
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+LVGMN +MS YIEFVADRLL LG KLY NPFDWMELISLQGK NFFE RV +YQ
Sbjct: 267 SLVGMNANMMSTYIEFVADRLLLQLGVSKLYNAVNPFDWMELISLQGKANFFEHRVDQYQ 326
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA VM G NH F+ D DF
Sbjct: 327 KAGVM---QGGEENHSFRTDCDF 346
>gi|303278144|ref|XP_003058365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459525|gb|EEH56820.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 338
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 241/326 (73%), Positives = 272/326 (83%), Gaps = 1/326 (0%)
Query: 5 PEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFV 64
PE L A +RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++HWE L+ DEKHF+
Sbjct: 13 PEPILDAAGSERFTMFPIKYGDIWEMYKKAEASFWTAEEVDLSDDMKHWEKLSDDEKHFI 72
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIVLENL RFM EVQ+ EARAFYGFQIAIENIHSEMYSLL++ YIKD+
Sbjct: 73 SHILAFFAASDGIVLENLGVRFMGEVQIPEARAFYGFQIAIENIHSEMYSLLIDAYIKDA 132
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+K LF A+E +PCVAKKA WAL WI+ S TFAERLIAFAC+EGIFFSGSFC+I+WLKK
Sbjct: 133 AQKKYLFEAMENIPCVAKKADWALKWIESSATFAERLIAFACIEGIFFSGSFCSIYWLKK 192
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RG+MPGLTFSNELISRDEGLH DFACLLYS L+ K V+ +V EAVEIE+EFVCDAL
Sbjct: 193 RGMMPGLTFSNELISRDEGLHRDFACLLYSYLQNKPDVSIVRQIVCEAVEIEKEFVCDAL 252
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +LVGMN +LMS+YIEFVAD LLG LG K Y NPF++MELISLQGKTNFFEKRVGE
Sbjct: 253 PVSLVGMNKDLMSEYIEFVADHLLGQLGLEKEYNTVNPFEFMELISLQGKTNFFEKRVGE 312
Query: 305 YQKASVMSSL-NGNGGNHVFKIDEDF 329
YQK+ VM SL GNGG F +DEDF
Sbjct: 313 YQKSGVMGSLGGGNGGTTNFSLDEDF 338
>gi|149279601|ref|ZP_01885730.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
sp. BAL39]
gi|149229637|gb|EDM35027.1| ribonucleoside-diphosphate reductase 1, beta subunit [Pedobacter
sp. BAL39]
Length = 324
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/324 (70%), Positives = 270/324 (83%), Gaps = 3/324 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EE LL N DRF + PI+YP+IWEMYKK+EASFWTAEE+DLS D +HW+ L E+HF++
Sbjct: 4 EEVLLKENKDRFVLLPIKYPEIWEMYKKSEASFWTAEEIDLSDDQKHWDNLNDGERHFIS 63
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFF+ASDGIV ENLA FM+EVQ+ EAR FYGFQI +ENIHSE Y+LL++TYIKD +
Sbjct: 64 HILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYIKDPE 123
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLFHAIETVPCV KKA WAL WID FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 124 EKDRLFHAIETVPCVKKKAEWALRWIDNG-NFAERLVAFAAVEGIFFSGSFCSIFWLKKR 182
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEG HC+FACLLYS+L+ KLSEE V ++++AVEIE+EFV DALP
Sbjct: 183 GLMPGLTFSNELISRDEGSHCEFACLLYSMLKNKLSEEHVHGIIRDAVEIEKEFVTDALP 242
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
AL+GMN +LMSQYIEFVADR L LGY K+Y NPFD+ME+ISLQGKTNFFEKRVG+Y
Sbjct: 243 VALIGMNAKLMSQYIEFVADRWLQELGYTKIYHATNPFDFMEMISLQGKTNFFEKRVGDY 302
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK+ V++S F +D+DF
Sbjct: 303 QKSGVLTSSEDKAA--AFSLDDDF 324
>gi|373954256|ref|ZP_09614216.1| ribonucleotide reductase [Mucilaginibacter paludis DSM 18603]
gi|373890856|gb|EHQ26753.1| ribonucleotide reductase [Mucilaginibacter paludis DSM 18603]
Length = 343
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 231/327 (70%), Positives = 266/327 (81%), Gaps = 4/327 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S E LL N DRF + PI YPQIWEMYKK EASFWTAEE+DLS D++ W L E+H
Sbjct: 21 SQENELLLRENKDRFVILPINYPQIWEMYKKHEASFWTAEEIDLSDDMKDWNNLNDGERH 80
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++H+LAFFAASDGIV ENLA FM+EVQ+ EAR FYGFQI +ENIHSE Y+LL++TYIK
Sbjct: 81 FISHILAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYIK 140
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D+ EKNRLFHAIETVPCV KK WAL WI+ TFAERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 141 DTTEKNRLFHAIETVPCVKKKGEWALKWIENG-TFAERLVAFAAVEGIFFSGSFCSIFWL 199
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEG+HC+FACLLYS+L KLS+E V ++ +AVEIE+EFV D
Sbjct: 200 KKRGLMPGLTFSNELISRDEGMHCEFACLLYSMLSNKLSKEAVTTIIADAVEIEKEFVTD 259
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN +LMSQYIEFVADR L LGY KLY NPFD+ME+ISLQGKTNFFEKRV
Sbjct: 260 ALPVNLIGMNAKLMSQYIEFVADRWLQELGYDKLYHATNPFDFMEMISLQGKTNFFEKRV 319
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
G+YQK+ V LN + + F +DEDF
Sbjct: 320 GDYQKSGV---LNNDAKSQAFSMDEDF 343
>gi|308809930|ref|XP_003082274.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
gi|116060742|emb|CAL57220.1| putative ribonucleotide reductase small subunit (ISS), partial
[Ostreococcus tauri]
Length = 382
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/323 (70%), Positives = 266/323 (82%), Gaps = 3/323 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NPDRFC+FPI++P++WEMYKKAEASFWTAEEVDL+ D + W+ L +EKHFV+H
Sbjct: 63 EPLLRDNPDRFCLFPIKHPRVWEMYKKAEASFWTAEEVDLTYDYKDWQTLNENEKHFVSH 122
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFA+SDGIVLENL RFM++VQ+ EAR+FYGFQ+AIENIHSEMYSLLL+TYIKD +
Sbjct: 123 VLAFFASSDGIVLENLCSRFMSDVQLPEARSFYGFQLAIENIHSEMYSLLLDTYIKDPKK 182
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LF AI TVP VA KA WAL+WI +F ERL+ FACVEGIFFSGSFCAIFWLKKRG
Sbjct: 183 KSELFRAIHTVPTVAMKADWALHWIGSDASFPERLVGFACVEGIFFSGSFCAIFWLKKRG 242
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LM GLTFSNELISRDEGLHCDFACLLY +L+ LSE + +V +AV+IE+EFVCDAL C
Sbjct: 243 LMRGLTFSNELISRDEGLHCDFACLLYGMLQNPLSEATLHHIVGDAVKIEKEFVCDALSC 302
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+LVGMN ++MS YIEFVADRLL LG KL+ NPFDWMELISLQGK NFFE RV +YQ
Sbjct: 303 SLVGMNADMMSTYIEFVADRLLIQLGASKLFNAVNPFDWMELISLQGKANFFEHRVDQYQ 362
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA VM ++ NH F+ D DF
Sbjct: 363 KAGVMGNVE---DNHAFRTDCDF 382
>gi|452819577|gb|EME26633.1| ribonucleoside-diphosphate reductase subunit M2 [Galdieria
sulphuraria]
Length = 464
Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust.
Identities = 228/323 (70%), Positives = 266/323 (82%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL + RF +FPI+Y QIWE+YK+AEASFWT EEVDLSQDLR W +L + E+HF++H
Sbjct: 146 EPLLLEDTSRFVLFPIRYRQIWELYKRAEASFWTVEEVDLSQDLRDWNSLHSSEQHFISH 205
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQV EAR FYGFQ+A+EN+HSEMY+LL++TYI+D E
Sbjct: 206 VLAFFAASDGIVNENLAARFSTEVQVPEARCFYGFQMAMENVHSEMYALLIDTYIRDMAE 265
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K RLF+AIE + CV KKA W+L WI S +FAERL+AFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 266 KRRLFYAIENLTCVKKKADWSLKWIRCSSSFAERLVAFAAVEGIFFSGSFCSIFWLKKRG 325
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHC+FACLLYSLL+ LS+ERV ++ +AV+ E+EF+ DALP
Sbjct: 326 LMPGLTFSNELISRDEGLHCEFACLLYSLLQHPLSQERVTEIIVDAVDHEKEFILDALPV 385
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
AL+GMN LMSQYIE+ ADRLL ALGY Y V+NPFDWMELISLQGKTNFFE+RVGEYQ
Sbjct: 386 ALIGMNAGLMSQYIEYCADRLLQALGYRSYYQVSNPFDWMELISLQGKTNFFERRVGEYQ 445
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
A VM + VF+ D DF
Sbjct: 446 MAGVM----ARKEDQVFRTDLDF 464
>gi|392334327|ref|XP_003753140.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Rattus norvegicus]
gi|392354916|ref|XP_003751887.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Rattus norvegicus]
Length = 390
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/329 (69%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|409097319|ref|ZP_11217343.1| ribonucleoside-diphosphate reductase [Pedobacter agri PB92]
Length = 323
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/326 (68%), Positives = 269/326 (82%), Gaps = 3/326 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +E LL N DRF + PI+YP IWEMYKK EASFWTAEE+DLS D +HW+ L E+HF
Sbjct: 1 MEQELLLQENKDRFVLLPIKYPAIWEMYKKTEASFWTAEEIDLSDDQKHWDNLNDGERHF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++H+LAFF+ASDGIV ENLA FM+EVQ+ EAR FYGFQI +ENIH+E Y+LL++TYIKD
Sbjct: 61 ISHILAFFSASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHAETYALLIDTYIKD 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+EK+RLFHAI+TVP V +KA WAL WI+ TFAERL+AFA VEGIFFSGSFC+IFWLK
Sbjct: 121 PEEKDRLFHAIDTVPAVKRKAEWALRWIENG-TFAERLVAFAAVEGIFFSGSFCSIFWLK 179
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG HC+FACLLYS+L KLSEE V +++ +AVEIE+EF+ DA
Sbjct: 180 KRGLMPGLTFSNELISRDEGSHCEFACLLYSMLSNKLSEEAVHSIISDAVEIEKEFITDA 239
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LMSQYIEFVADR L LGY K+Y NPFD+ME+ISLQGKTNFFEKRVG
Sbjct: 240 LPVALIGMNAKLMSQYIEFVADRWLQELGYKKIYNATNPFDFMEMISLQGKTNFFEKRVG 299
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQK+ V++S + F +DEDF
Sbjct: 300 DYQKSGVLTSADNKA--QAFSLDEDF 323
>gi|298713498|emb|CBJ27053.1| Ribonucleoside-diphosphate reductase small chain [Ectocarpus
siliculosus]
Length = 504
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 224/324 (69%), Positives = 267/324 (82%), Gaps = 1/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+ +P RF +FPI++P++W+MYKKA+ASFWT EEVDLSQD R WEALT +E+HF++
Sbjct: 181 EPICRADPSRFVLFPIKHPELWDMYKKAKASFWTVEEVDLSQDSRDWEALTGNEQHFISM 240
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV+ENL RF EVQ+ EAR FYGFQIA+E+IH EMY+LLL+TYIKD E
Sbjct: 241 VLAFFAASDGIVMENLVERFSQEVQLPEARCFYGFQIAMESIHQEMYALLLDTYIKDKQE 300
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++ LF+A +PCV +KA WA+ WI TFAERL+AFA VEG+FFSGSFCAIFWLKKRG
Sbjct: 301 RDNLFNAYNDIPCVKQKADWAMRWIGSDATFAERLVAFAAVEGVFFSGSFCAIFWLKKRG 360
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNE+ISRDEGLHCDFAC L++ L K S E V A+V+EAVE+E+ F+C ALPC
Sbjct: 361 LMPGLTFSNEMISRDEGLHCDFACQLFASLENKPSRETVMAIVREAVEVEKSFICGALPC 420
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN +MSQYIEFVADRLLG+LGYGK YG NPFDWM+LISLQGKTNFFEKRVGEYQ
Sbjct: 421 SLIGMNAGVMSQYIEFVADRLLGSLGYGKSYGTQNPFDWMDLISLQGKTNFFEKRVGEYQ 480
Query: 307 KASVMSSLNGNGGNHV-FKIDEDF 329
KA VM G G + F++D DF
Sbjct: 481 KAGVMGGGGGPGEDRRNFRLDADF 504
>gi|71043760|ref|NP_001020911.1| ribonucleoside-diphosphate reductase subunit M2 [Rattus norvegicus]
gi|77416595|sp|Q4KLN6.1|RIR2_RAT RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|68533806|gb|AAH99082.1| Ribonucleotide reductase M2 [Rattus norvegicus]
gi|149051013|gb|EDM03186.1| rCG61374 [Rattus norvegicus]
Length = 390
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/329 (69%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ +V IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|452822363|gb|EME29383.1| ribonucleotide reductase small subunit [Galdieria sulphuraria]
Length = 375
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 221/317 (69%), Positives = 266/317 (83%), Gaps = 3/317 (0%)
Query: 13 NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFA 72
+ +R+ +FPI++P+IW+MYKK EASFWTAEE+DLS DL W+ L ADE+HF++HVLAFFA
Sbjct: 62 SSERYTLFPIRHPEIWKMYKKHEASFWTAEEIDLSSDLEDWKKLNADERHFISHVLAFFA 121
Query: 73 ASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
+SDGIVLENLA RF +VQ+ EAR FYGFQIA+ENIHSE YSLL++TYI+D+ EK RLF
Sbjct: 122 SSDGIVLENLAERFCRDVQIPEARCFYGFQIAMENIHSETYSLLIDTYIRDAQEKARLFE 181
Query: 133 AIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLT 192
A+E +PC+ KKA WAL WI S +FAERL+AFA VEGIFFSGSFC+IFWLKKRGLMPGLT
Sbjct: 182 AMERIPCIEKKAQWALRWIQSSASFAERLVAFAAVEGIFFSGSFCSIFWLKKRGLMPGLT 241
Query: 193 FSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMN 252
FSNELISRDEGLHCDFACLLYSLL KL E ++A++ +AV E+EF+C++LP AL+GMN
Sbjct: 242 FSNELISRDEGLHCDFACLLYSLLPEKLPRETIEAIIVDAVSCEKEFICESLPVALIGMN 301
Query: 253 GELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMS 312
++MSQYIEFVADRLL ALGY K + NPFDWMELISL+GKTNFFEKRVGEYQKA V
Sbjct: 302 SDMMSQYIEFVADRLLVALGYEKYFQSRNPFDWMELISLEGKTNFFEKRVGEYQKAGV-- 359
Query: 313 SLNGNGGNHVFKIDEDF 329
+N +G F++D DF
Sbjct: 360 -VNDSGEAQEFRLDADF 375
>gi|320164906|gb|EFW41805.1| ribonucleotide reductase m2 polypeptide [Capsaspora owczarzaki ATCC
30864]
Length = 352
Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/325 (71%), Positives = 266/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL PNP RF +FPIQY +W+MYKKAEASFWTAEEVDLS+DL W+ L ++E+HF++
Sbjct: 32 DEPLLKPNPHRFVLFPIQYHDVWKMYKKAEASFWTAEEVDLSKDLNDWDKLKSEERHFIS 91
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF TEVQ+ E R+FY FQIAIENIHSEMYSLL++ YIKDS
Sbjct: 92 HVLAFFAASDGIVNENLLLRFSTEVQIPEVRSFYCFQIAIENIHSEMYSLLIDMYIKDSA 151
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ +LF+AIET+PCVAKKA WAL WI D TFA RLIAFA VEGIFFSGSF AIFWLKK
Sbjct: 152 EREKLFNAIETLPCVAKKAQWALRWISDRRSTFAHRLIAFAAVEGIFFSGSFAAIFWLKK 211
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFAC+L+ LL + S V A++K+AV IE+EF+ DAL
Sbjct: 212 RGLMPGLTFSNELISRDEGLHCDFACMLFGLLNNRPSNADVLAIIKDAVAIEQEFLTDAL 271
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMNG LM YIEFVADRLL ALG K Y V NPFD+M+LISLQGKTNFFE+RVGE
Sbjct: 272 PVALIGMNGGLMKTYIEFVADRLLVALGQEKHYKVENPFDFMDLISLQGKTNFFERRVGE 331
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK VMS+ + H F +D DF
Sbjct: 332 YQKPGVMSTKD----EHRFTLDADF 352
>gi|223996990|ref|XP_002288168.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975276|gb|EED93604.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 476 bits (1225), Expect = e-132, Method: Compositional matrix adjust.
Identities = 231/325 (71%), Positives = 265/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPI+ P+IW+MYKKAEASFWTAEE+DL++DL+ WE+L+ +E+HFV+
Sbjct: 15 EEPLLKENPGRFVLFPIKEPEIWKMYKKAEASFWTAEEIDLAEDLKDWESLSINERHFVS 74
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL G F TEV AEAR FYGFQIA+ENIHSE YSLL++TYIKD+
Sbjct: 75 HVLAFFAASDGIVNENLTGNFSTEVTSAEARCFYGFQIAVENIHSETYSLLIDTYIKDAQ 134
Query: 126 EKNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+ L +AIETVPCV KKA WAL W D G+ +FAER IAFA VEGIFFSGSFCAIFWLKK
Sbjct: 135 EKDHLLNAIETVPCVQKKANWALRWCDAGNASFAERCIAFAAVEGIFFSGSFCAIFWLKK 194
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGL FSNELISRDEGLHCDFACL+YS L +L E R++ ++ AVEIE+EFV DAL
Sbjct: 195 RGLMPGLCFSNELISRDEGLHCDFACLIYSKLVNQLPESRIEEIITNAVEIEKEFVSDAL 254
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM QYIEF ADRLLGALG K Y NPF+WME+ISLQGKTNFFEKRVGE
Sbjct: 255 PVELIGMNSKLMCQYIEFCADRLLGALGCKKHYMAVNPFEWMEMISLQGKTNFFEKRVGE 314
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
Y K+ V N + VF ID DF
Sbjct: 315 YAKSGV----GVNKDDQVFSIDADF 335
>gi|49899161|gb|AAH75746.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
Length = 386
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/328 (69%), Positives = 268/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++
Sbjct: 63 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
DS E+ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L +K SEE VK ++ AVEIE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLISKPSEETVKKIIMNAVEIEQEFLT 302
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN +LM QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 363 VGEYQRMGVMSGTTDN----TFTLDADF 386
>gi|198420293|ref|XP_002130242.1| PREDICTED: similar to Ribonucleoside-diphosphate reductase subunit
M2 (Ribonucleotide reductase small subunit)
(Ribonucleotide reductase small chain) [Ciona
intestinalis]
Length = 393
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/325 (71%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+D+ HWEAL +E+ F++
Sbjct: 73 EEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMVHWEALKPNERKFIS 132
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIAIENIHSEMYSLL+ TYI+D+
Sbjct: 133 HVLAFFAASDGIVNENLVERFAQEVQITEARFFYGFQIAIENIHSEMYSLLINTYIRDTH 192
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV KKA WAL WI SE T+AER+IAFA VEGIFFSGSF AIFWLKK
Sbjct: 193 EREFLFNAIETLPCVRKKAEWALKWISDSESTYAERIIAFASVEGIFFSGSFAAIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE RV +VK+AV IE+EF+ DAL
Sbjct: 253 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEARVVEIVKDAVTIEQEFLTDAL 312
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM QYIEFVADRLL LG K++ V NPFD+MELISL+GKTNFFEKRVGE
Sbjct: 313 PVALIGMNNKLMKQYIEFVADRLLVELGCSKVFKVENPFDFMELISLEGKTNFFEKRVGE 372
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM+ + F +D DF
Sbjct: 373 YQKAGVMA----KAEDMKFTLDADF 393
>gi|89268988|emb|CAJ81953.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
tropicalis]
gi|89269815|emb|CAJ81580.1| ribonucleotide reductase m2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 386
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 230/329 (69%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P I +EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DLRHWE+L A+EK
Sbjct: 62 PRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWESLKAEEK 121
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 122 YFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 181
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 182 KDPKEREYLFNAIETLPCVKKKADWALRWISDKQATYGERVVAFAAVEGIFFSGSFASIF 241
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV L+ +AV+IE+EF+
Sbjct: 242 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEERVVQLITDAVQIEQEFL 301
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKATNPFDFMENISLEGKTNFFEK 361
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VMS N F +D DF
Sbjct: 362 KVGEYQKMGVMSKPKDN----TFTLDADF 386
>gi|18859327|ref|NP_571525.1| ribonucleoside-diphosphate reductase subunit M2 [Danio rerio]
gi|292624782|ref|XP_002665783.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Danio rerio]
gi|3914657|sp|P79733.1|RIR2_DANRE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase protein R2 class
I; AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|1695831|gb|AAB37103.1| ribonucleotide reductase protein R2 class I [Danio rerio]
gi|27881838|gb|AAH44355.1| Ribonucleotide reductase M2 polypeptide [Danio rerio]
gi|182889152|gb|AAI64707.1| Rrm2 protein [Danio rerio]
gi|347311297|gb|AEO79839.1| reductase M2 polypeptide variant 1 [Danio rerio]
gi|347311299|gb|AEO79840.1| reductase M2 polypeptide variant 2 [Danio rerio]
gi|347311301|gb|AEO79841.1| reductase M2 polypeptide variant 3a [Danio rerio]
gi|347311303|gb|AEO79842.1| reductase M2 polypeptide variant 3b [Danio rerio]
Length = 386
Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/328 (69%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++
Sbjct: 63 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
DS E+ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEE VK ++ AVEIE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 302
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN +LM QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 363 VGEYQRMGVMSGTTDN----TFTLDADF 386
>gi|72008642|ref|XP_780110.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 412
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/326 (70%), Positives = 265/326 (81%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL N RF +FPIQY IW+ YKKAEASFWTAEEVDLS+DL HW L +E+HF++
Sbjct: 87 DEPLLRENARRFVIFPIQYHDIWQFYKKAEASFWTAEEVDLSKDLDHWANLKDEERHFIS 146
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQVAEAR FYGFQIAIENIHSEMYSLL++TYIKDS
Sbjct: 147 HVLAFFAASDGIVNENLVERFSQEVQVAEARCFYGFQIAIENIHSEMYSLLIDTYIKDSV 206
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+A+ET+PCV KKA WALNWI S F R++AFA VEGIFFSGSF AIFWLKK
Sbjct: 207 QRDFLFNAVETLPCVTKKAQWALNWIGSDSADFGTRIVAFAAVEGIFFSGSFAAIFWLKK 266
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K EE V+ ++KEAV IE+EF+ DAL
Sbjct: 267 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLNNKPDEEHVQGIIKEAVAIEQEFLTDAL 326
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC+L+GMN LM +YIEFVADRLL LG GK++ V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 327 PCSLIGMNAVLMKRYIEFVADRLLVELGCGKIWKVENPFDFMENISLEGKTNFFEKRVGE 386
Query: 305 YQKASVMSSLNGN-GGNHVFKIDEDF 329
YQK VMSS N + H F ++EDF
Sbjct: 387 YQKMGVMSSTNSSTKKQHTFSLEEDF 412
>gi|56118690|ref|NP_001007890.1| ribonucleotide reductase M2, gene 2 [Xenopus (Silurana) tropicalis]
gi|51258920|gb|AAH80161.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 386
Score = 475 bits (1223), Expect = e-131, Method: Compositional matrix adjust.
Identities = 230/329 (69%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P I +EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DLRHWE+L A+EK
Sbjct: 62 PRIQDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLRHWESLKAEEK 121
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 122 YFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 181
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 182 KDPKEREYLFNAIETLPCVKKKADWALRWIGDKQATYGERVVAFAAVEGIFFSGSFASIF 241
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV L+ +AV+IE+EF+
Sbjct: 242 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEERVVQLITDAVQIEQEFL 301
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKATNPFDFMENISLEGKTNFFEK 361
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VMS N F +D DF
Sbjct: 362 KVGEYQKMGVMSKPKDN----TFTLDADF 386
>gi|354494802|ref|XP_003509524.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cricetulus griseus]
gi|344243911|gb|EGW00015.1| Ribonucleoside-diphosphate reductase subunit M2 [Cricetulus
griseus]
Length = 390
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|145537171|ref|XP_001454302.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422057|emb|CAK86905.1| unnamed protein product [Paramecium tetraurelia]
Length = 507
Score = 474 bits (1219), Expect = e-131, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 262/324 (80%), Gaps = 4/324 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP+RF +FPI+Y IW MYK+ +ASFWTAEE+DL QDL+ WE LTADEKHF+
Sbjct: 188 DEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLYQDLKDWEKLTADEKHFIK 247
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIV ENLA +F TEVQV EAR FYGFQIA+ENIHSE YSLL++TYI D +
Sbjct: 248 YVLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIAMENIHSETYSLLIDTYITDEN 307
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN L HAI+ VP + KKA WA+ WI+ +++FAERLIAFA VEGIFFSGSFCAIFW+KKR
Sbjct: 308 EKNYLLHAIDNVPVIQKKAMWAMKWINNNDSFAERLIAFAAVEGIFFSGSFCAIFWIKKR 367
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY + KLS +RV ++ AVEIE+EF+ +ALP
Sbjct: 368 SLMPGLTFSNELISRDEGLHTDFACLLYKHMINKLSIQRVHEIISSAVEIEKEFISEALP 427
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL+ ALG K+Y NPF+WM++ISLQGKTNFFE+RVG+Y
Sbjct: 428 VELIGMNSNLMKQYIEFVADRLIFALGAPKIYNSKNPFEWMDMISLQGKTNFFERRVGDY 487
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VMS + VF +D DF
Sbjct: 488 QKAGVMSK----KQDKVFTMDADF 507
>gi|348518323|ref|XP_003446681.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Oreochromis niloticus]
Length = 391
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/328 (69%), Positives = 269/328 (82%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWEAL +E++
Sbjct: 68 SQEEEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERY 127
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RFM EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 128 FISHVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 187
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E+ LF+AIET+PCV KKA WALNWI + + T+ ER++AFA VEGIFFSGSF AIFW
Sbjct: 188 DPKEREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFW 247
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K +E V +++K AVEIE+EF+
Sbjct: 248 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLT 307
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN ++M QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 308 DALPVKLIGMNCDMMKQYIEFVADRLLLELGFSKIYRVENPFDFMENISLEGKTNFFEKR 367
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VM++ N F++D DF
Sbjct: 368 VGEYQRMGVMAAPTDN----TFRLDADF 391
>gi|348518329|ref|XP_003446684.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Oreochromis niloticus]
Length = 391
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/325 (69%), Positives = 268/325 (82%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWEAL +E++F++
Sbjct: 71 EEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYFIS 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RFM EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD
Sbjct: 131 HVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV KKA WALNWI + + T+ ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K +E V +++K AVEIE+EF+ DAL
Sbjct: 251 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ++M QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 311 PVKLIGMNCDMMKQYIEFVADRLLLELGFSKIYRVENPFDFMENISLEGKTNFFEKRVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VM++ N F++D DF
Sbjct: 371 YQRMGVMAAPTDN----TFRLDADF 391
>gi|424513798|emb|CCO66420.1| Ribonucleotide reductase subunit [Bathycoccus prasinos]
Length = 517
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/325 (70%), Positives = 258/325 (79%), Gaps = 2/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL PN DRF +FP++YP+IWE YKKAEASFWTAEE+DL+ D R W L +E+HF+T
Sbjct: 194 EEPLLMPNEDRFTLFPMKYPRIWEYYKKAEASFWTAEEIDLTYDYRDWITLNENEQHFIT 253
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENL RFM E+QV EARAFY FQ +IENIHSE Y+LLLETY+KD
Sbjct: 254 HVLAFFAASDGIVLENLCVRFMKEIQVPEARAFYAFQQSIENIHSETYALLLETYVKDPI 313
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
+K LF AI T+P V KKA WA+ WI+ S FAERL+ FACVEGIFFSGSFCAIFWLKK
Sbjct: 314 QKRNLFRAIHTIPTVKKKADWAMKWIESSSARFAERLVGFACVEGIFFSGSFCAIFWLKK 373
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLM GLTFSNELISRDEGLHCDFAC LYS L+ KLSEE + +V AV IE+EFVCDAL
Sbjct: 374 RGLMKGLTFSNELISRDEGLHCDFACELYSELKHKLSEEELHEIVSNAVAIEKEFVCDAL 433
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
CALVGMN +LMS Y+EFVADRLL LG K Y NPFDWME ISLQGK NFFE RV +
Sbjct: 434 SCALVGMNADLMSDYVEFVADRLLVQLGASKYYNAQNPFDWMETISLQGKANFFEHRVDQ 493
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM++ N + + F+ D DF
Sbjct: 494 YQKAGVMNN-NADAQHFEFRTDCDF 517
>gi|348518321|ref|XP_003446680.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Oreochromis niloticus]
Length = 385
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/328 (69%), Positives = 269/328 (82%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWEAL +E++
Sbjct: 62 SQEEEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERY 121
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RFM EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 122 FISHVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 181
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E+ LF+AIET+PCV KKA WALNWI + + T+ ER++AFA VEGIFFSGSF AIFW
Sbjct: 182 DPKEREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFW 241
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K +E V +++K AVEIE+EF+
Sbjct: 242 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLT 301
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN ++M QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 302 DALPVKLIGMNCDMMKQYIEFVADRLLLELGFSKIYRVENPFDFMENISLEGKTNFFEKR 361
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VM++ N F++D DF
Sbjct: 362 VGEYQRMGVMAAPTDN----TFRLDADF 385
>gi|348518327|ref|XP_003446683.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Oreochromis niloticus]
Length = 385
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/325 (69%), Positives = 268/325 (82%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWEAL +E++F++
Sbjct: 65 EEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEALKDEERYFIS 124
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RFM EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD
Sbjct: 125 HVLAFFAASDGIVNENLVERFMQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 184
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV KKA WALNWI + + T+ ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 185 EREYLFNAIETLPCVKKKADWALNWIGNKNATYGERVVAFAAVEGIFFSGSFAAIFWLKK 244
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K +E V +++K AVEIE+EF+ DAL
Sbjct: 245 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLLNKPPKETVISIIKNAVEIEQEFLTDAL 304
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ++M QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 305 PVKLIGMNCDMMKQYIEFVADRLLLELGFSKIYRVENPFDFMENISLEGKTNFFEKRVGE 364
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VM++ N F++D DF
Sbjct: 365 YQRMGVMAAPTDN----TFRLDADF 385
>gi|124010268|ref|ZP_01694921.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
marina ATCC 23134]
gi|123983653|gb|EAY24093.1| ribonucleoside-diphosphate reductase, beta subunit [Microscilla
marina ATCC 23134]
Length = 330
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 231/331 (69%), Positives = 268/331 (80%), Gaps = 3/331 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTAD 59
M + EPLL +RF +FPIQ IW+MYK+AEASFWTAEE+DL+QDL+ W E L D
Sbjct: 1 MSNTVSEPLLESVDNRFVLFPIQQNDIWQMYKQAEASFWTAEEIDLAQDLKDWDEKLNDD 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+THVLAFFAASDGIV ENLA F+ EV+ EAR FYGFQ+AIENIH+E YSLL++T
Sbjct: 61 ERHFITHVLAFFAASDGIVNENLAVNFLEEVKSPEARCFYGFQVAIENIHAETYSLLIDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD+DEK+RLF+A+ETVPCV KKA WAL WID +FAERLIAFA VEGIFFSGSFC+I
Sbjct: 121 YIKDADEKHRLFNALETVPCVKKKAEWALRWIDKG-SFAERLIAFAAVEGIFFSGSFCSI 179
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIERE 238
FWLKKRGLMPGL+FSNELISRDEGLHCDFACLLY S ++ KL E V +++K AVEIE+E
Sbjct: 180 FWLKKRGLMPGLSFSNELISRDEGLHCDFACLLYNSYIKNKLPNETVVSIIKNAVEIEKE 239
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
FV DALP L+GMN +LMS+YIEFVADRLL LG K Y ANPFD+ME+ISL+GKTNFF
Sbjct: 240 FVTDALPVKLIGMNSDLMSEYIEFVADRLLVELGCEKQYNTANPFDFMEMISLEGKTNFF 299
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
EKRV EY KA V + GNH F +DEDF
Sbjct: 300 EKRVSEYSKAGVANKPASGQGNHSFSMDEDF 330
>gi|347311305|gb|AEO79843.1| reductase M2 polypeptide variant 3c [Danio rerio]
Length = 357
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/328 (69%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++
Sbjct: 34 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 93
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 94 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 153
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
DS E+ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 154 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 213
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEE VK ++ AVEIE+EF+
Sbjct: 214 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 273
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN +LM QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 274 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 333
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 334 VGEYQRMGVMSGTTDN----TFTLDADF 357
>gi|348553865|ref|XP_003462746.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cavia porcellus]
Length = 484
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 228/329 (69%), Positives = 269/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL +E+
Sbjct: 160 PSVEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEER 219
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 220 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 279
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 280 KDSREREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 339
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + SE+RVK ++ AV IE+EF+
Sbjct: 340 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHRPSEQRVKEIIVNAVRIEQEFL 399
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN ELM QYIEFVADRL+ LG+GK++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 400 TEALPVKLIGMNCELMKQYIEFVADRLMLELGFGKVFQVENPFDFMENISLEGKTNFFEK 459
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 460 RVGEYQRMGVMSSPTENS----FTLDADF 484
>gi|294950175|ref|XP_002786498.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239900790|gb|EER18294.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 350
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/338 (66%), Positives = 271/338 (80%), Gaps = 13/338 (3%)
Query: 5 PEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFV 64
P E LL NP R+ MFPI+Y IWEMYKK EASFWTAEE+DLSQDLR WE L+ +++HF+
Sbjct: 13 PMEDLLKENPHRYVMFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWENLSDNDRHFI 72
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIVLENL+ +F EVQ EARAFYGFQIA+ENIHSE YSLL++ YIKD
Sbjct: 73 SHVLAFFAASDGIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKDP 132
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++K+++F AIETVP V KKA WAL+WI+ FAERLIAFACVEGI FSGSFCAI+WLKK
Sbjct: 133 EQKDKIFRAIETVPSVRKKAEWALSWINDDNCFAERLIAFACVEGILFSGSFCAIYWLKK 192
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-TKLSEERVKALVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEGLH DFACLLY++L+ T+L +ERV +V+ AVE+ER F+ ++
Sbjct: 193 RGLMPGLTFSNELISRDEGLHADFACLLYNMLKYTRLPDERVHEIVRGAVEVERVFISES 252
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM +YIEFVADRLL ALG+ KLY NPFDWM++ISLQGKTNFFEKRVG
Sbjct: 253 LPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNATNPFDWMKMISLQGKTNFFEKRVG 312
Query: 304 EYQKASVMSSLNGNGGNHV------------FKIDEDF 329
EYQK VM+ + + + F +DEDF
Sbjct: 313 EYQKGGVMAGTAAHKNSSMDAEERRKSIGADFALDEDF 350
>gi|145553335|ref|XP_001462342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430181|emb|CAK94969.1| unnamed protein product [Paramecium tetraurelia]
Length = 355
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 262/324 (80%), Gaps = 4/324 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP+RF +FPI+Y IW MYK+ +ASFWTAEE+DL QDL+ WE LTADEKHF+
Sbjct: 36 DEPLLKQNPNRFVLFPIKYNDIWNMYKQHKASFWTAEEIDLYQDLKDWEKLTADEKHFIK 95
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIV ENLA +F TEVQV EAR FYGFQIA+ENIHSE YSLL++TYI D +
Sbjct: 96 YVLAFFAASDGIVNENLAQQFCTEVQVPEARCFYGFQIAMENIHSETYSLLIDTYITDEN 155
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN L HAI+ VP + KKA WA+ WI+ +++FAERLIAFA VEGIFFSGSFCAIFW+KKR
Sbjct: 156 EKNYLLHAIDNVPVIQKKAMWAMKWINENDSFAERLIAFAAVEGIFFSGSFCAIFWIKKR 215
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY L K+S +R+ ++ AVEIE+EF+ +ALP
Sbjct: 216 SLMPGLTFSNELISRDEGLHTDFACLLYKHLVNKMSNQRIHEIISSAVEIEKEFISEALP 275
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL+ ALG K+Y NPF+WM++ISLQGKTNFFE+RVG+Y
Sbjct: 276 VELIGMNSNLMKQYIEFVADRLIFALGAPKIYNSKNPFEWMDMISLQGKTNFFERRVGDY 335
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VMS + VF +D DF
Sbjct: 336 QKAGVMSK----KQDKVFTMDADF 355
>gi|929959|gb|AAA74020.1| ribonuleotide reductase small subunit [Urechis caupo]
Length = 399
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 271/325 (83%), Gaps = 2/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+D+ WE L ++EKHFV+
Sbjct: 76 EEPLLRDNPRRFVVFPIQYNDIWQMYKKAEASFWTAEEVDLSKDISDWEKLKSEEKHFVS 135
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYG+QIA+ENIHSEMYSLL++TY+KD
Sbjct: 136 HVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGYQIAVENIHSEMYSLLIDTYVKDPT 195
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF+AIET+PCV +KA WAL WI D +F ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 196 ERDFLFNAIETMPCVKEKADWALRWINDEQSSFGERVVAFAAVEGIFFSGSFASIFWLKK 255
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RG+MPGLTFSNELISRDEGLHCDFACL++S L+ K S+ERV ++++AV IE+ F+ +AL
Sbjct: 256 RGVMPGLTFSNELISRDEGLHCDFACLMFSHLKNKPSQERVYDIIRDAVRIEQSFLTEAL 315
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL LG K++ V NPFD+M+ ISL+GKTNFFEKRVGE
Sbjct: 316 PVNLIGMNCKLMAQYIEFVADRLLLELGCPKIWNVENPFDFMDNISLEGKTNFFEKRVGE 375
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK VMSS +G GG+H F ++EDF
Sbjct: 376 YQKMGVMSSQSG-GGSHQFSLEEDF 399
>gi|118383611|ref|XP_001024960.1| ribonucleoside-diphosphate reductase, beta subunit family protein
[Tetrahymena thermophila]
gi|89306727|gb|EAS04715.1| ribonucleoside-diphosphate reductase, beta subunit family protein
[Tetrahymena thermophila SB210]
Length = 376
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 266/324 (82%), Gaps = 4/324 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP+RF +FPI+Y ++WEMYKK ASFWTA+E+DL QDL+ WE LT +E+HF+
Sbjct: 57 DEPLLKDNPNRFVLFPIKYNKVWEMYKKELASFWTADEIDLYQDLKDWERLTDNERHFIK 116
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIVLENLA +FM EVQ+ EARAFYGFQIA+ENIHSE YSLL++TYIKD
Sbjct: 117 YVLAFFAASDGIVLENLAEQFMCEVQIPEARAFYGFQIAMENIHSETYSLLIDTYIKDEV 176
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF A + VP + KKA WAL WI+ ++ FA RLIAFA +EGIFFSGSFCAIFWLKKR
Sbjct: 177 EKDYLFKASQNVPVIHKKAQWALKWINNNDNFASRLIAFAAIEGIFFSGSFCAIFWLKKR 236
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLYS+L KL++E + ++ EAVEIE+EF+ +ALP
Sbjct: 237 SLMPGLTFSNELISRDEGLHTDFACLLYSMLNKKLTKEEIYEIITEAVEIEKEFISEALP 296
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +M QY+EFVADRLL ALG K Y NPF+WM++IS+QGKTNFFEKRVGEY
Sbjct: 297 VELIGMNSNMMKQYLEFVADRLLFALGVPKFYNSKNPFEWMDMISIQGKTNFFEKRVGEY 356
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA+VMSS + VF+++ DF
Sbjct: 357 QKANVMSS----KEDKVFRLNADF 376
>gi|347311307|gb|AEO79844.1| reductase M2 polypeptide variant 3d [Danio rerio]
Length = 334
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/328 (69%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++
Sbjct: 11 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 70
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 71 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 130
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
DS E+ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 131 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 190
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEE VK ++ AVEIE+EF+
Sbjct: 191 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 250
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN +LM QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 251 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 310
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 311 VGEYQRMGVMSGTTDN----TFTLDADF 334
>gi|397531939|gb|AFO54479.1| ribonucleotide reductase small subunit R2ii [Carassius carassius]
Length = 386
Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/328 (69%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++
Sbjct: 63 AVEEEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E++ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DPKERDFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEE VK ++ AV IE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEETVKKIIVNAVAIEQEFLT 302
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN +LM QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYKVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N F++D DF
Sbjct: 363 VGEYQRMGVMSGSTDN----TFRLDADF 386
>gi|397531937|gb|AFO54478.1| ribonucleotide reductase small subunit R2i [Carassius carassius]
Length = 385
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 227/328 (69%), Positives = 266/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++
Sbjct: 62 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 121
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 122 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 181
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E+ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 182 DPKEREFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFAAVEGIFFSGSFASIFW 241
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE VK ++ AVEIE+EF+
Sbjct: 242 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEATVKKIIMNAVEIEQEFLT 301
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN +LM QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 302 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYKVENPFDFMENISLEGKTNFFEKR 361
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N F++D DF
Sbjct: 362 VGEYQRMGVMSGPTDN----TFRLDADF 385
>gi|7106399|ref|NP_033130.1| ribonucleoside-diphosphate reductase subunit M2 [Mus musculus]
gi|132626|sp|P11157.1|RIR2_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|22218698|pdb|1H0N|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
gi|22218699|pdb|1H0O|A Chain A, Cobalt Substitution Of Mouse R2 Ribonucleotide Reductase
To Model The Reactive Diferrous State
gi|52696260|pdb|1W68|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Oxidizing Conditions. A Fully Occupied
Dinuclear Iron Cluster.
gi|52696261|pdb|1W69|A Chain A, Crystal Structure Of Mouse Ribonucleotide Reductase
Subunit R2 Under Reducing Conditions. A Fully Occupied
Dinuclear Iron Cluster And Bound Acetate.
gi|157834262|pdb|1XSM|A Chain A, Protein R2 Of Ribonucleotide Reductase From Mouse
gi|50720|emb|CAA33707.1| M2 ribonucleotide reductase [Mus musculus]
gi|200768|gb|AAA40062.1| ribonucleotide reductase subunit M2 [Mus musculus]
gi|26354034|dbj|BAC40647.1| unnamed protein product [Mus musculus]
gi|54887418|gb|AAH85136.1| Ribonucleotide reductase M2 [Mus musculus]
gi|74139292|dbj|BAE40793.1| unnamed protein product [Mus musculus]
gi|74151119|dbj|BAE27683.1| unnamed protein product [Mus musculus]
gi|74179887|dbj|BAE36508.1| unnamed protein product [Mus musculus]
gi|74188932|dbj|BAE39238.1| unnamed protein product [Mus musculus]
gi|74189151|dbj|BAE39331.1| unnamed protein product [Mus musculus]
gi|74206394|dbj|BAE24918.1| unnamed protein product [Mus musculus]
gi|74211991|dbj|BAE40165.1| unnamed protein product [Mus musculus]
Length = 390
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K +E+RV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|148705043|gb|EDL36990.1| ribonucleotide reductase M2 [Mus musculus]
Length = 411
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 87 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 146
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 147 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 206
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 207 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 266
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K +E+RV+ ++ AV IE+EF+
Sbjct: 267 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 326
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 327 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 386
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 387 RVGEYQRMGVMS----NSTENSFTLDADF 411
>gi|440894701|gb|ELR47090.1| Ribonucleoside-diphosphate reductase subunit M2 [Bos grunniens
mutus]
Length = 383
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 269/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL ++E+
Sbjct: 59 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKSEER 118
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 119 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 178
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D + T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 179 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGERVVAFAAVEGIFFSGSFASIF 238
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 239 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 298
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 299 TEALPVKLIGMNCSLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 358
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 359 RVGEYQRMGVMSSPTENS----FTLDADF 383
>gi|266918|sp|P07201.2|RIR2_SPISO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit;
AltName: Full=p41
gi|10342|emb|CAA38919.1| M2 (small) subunit of ribonucleotide reductase [Spisula
solidissima]
Length = 384
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/324 (70%), Positives = 266/324 (82%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLLA NP RF + PIQY IW+MYKKAEASFWTAEEVDLS+D+ HWE+L +EKHF++H
Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISH 121
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E
Sbjct: 122 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQE 181
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AIET+PCV +KA WA+ WI D S ++AER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 182 RDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKR 241
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
G+MPGLTFSNELISRDEGLHCDFACL++S L K S+ER+ ++ EAV+IE+ F+ +ALP
Sbjct: 242 GIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALP 301
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN +LM QYIEFVADRLL L KLY NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 302 CRLIGMNCDLMRQYIEFVADRLLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEY 361
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VMS N G +H F +D DF
Sbjct: 362 QKMGVMSGGN-TGDSHAFTLDADF 384
>gi|2500209|sp|Q60561.1|RIR2_MESAU RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|49650|emb|CAA48232.1| ribonucleotide reductase [Mesocricetus auratus]
Length = 386
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 9/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS + F +D DF
Sbjct: 366 RVGEYQRMGVMS--------NSFTLDADF 386
>gi|20178418|ref|NP_619839.1| CPXV051 protein [Cowpox virus]
gi|20153036|gb|AAM13497.1|AF482758_48 CPXV051 protein [Cowpox virus]
Length = 333
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 263/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT +EKHF+ H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S ++ ERL+AFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSASYGERLVAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|346644876|ref|NP_001231110.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Bos
taurus]
gi|296482361|tpg|DAA24476.1| TPA: ribonucleotide reductase M2 polypeptide isoform 1 [Bos taurus]
Length = 389
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 269/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL ++E+
Sbjct: 65 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKSEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D + T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>gi|335306880|ref|XP_003360612.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Sus
scrofa]
Length = 401
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE L +E+
Sbjct: 77 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEER 136
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 137 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 196
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 197 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 256
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 257 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 316
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+GK++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 317 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 376
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 377 RVGEYQRMGVMSSPTENS----FTLDADF 401
>gi|148234092|ref|NP_001079369.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus laevis]
gi|27371032|gb|AAH41209.1| MGC52676 protein [Xenopus laevis]
Length = 386
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HWE+L +EK
Sbjct: 62 PRLEDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKKEEK 121
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TY+
Sbjct: 122 YFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYV 181
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL+WI D TF ER++AFA VEGIFFSGSF +IF
Sbjct: 182 KDPKEREYLFNAIETLPCVKKKADWALHWIGDKQATFGERVVAFAAVEGIFFSGSFASIF 241
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV L+ +AV+IE+EF+
Sbjct: 242 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVVELITDAVQIEQEFL 301
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFKKVFKATNPFDFMENISLEGKTNFFEK 361
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VMS N F +D DF
Sbjct: 362 KVGEYQKMGVMSKAKDN----TFTLDADF 386
>gi|294463759|gb|ADE77404.1| unknown [Picea sitchensis]
Length = 289
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/288 (79%), Positives = 263/288 (91%)
Query: 42 EEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGF 101
EEVDLSQDL W LT +EKHF++HVLAFFAASDGIVLENLAGRF+ +VQ+ EARAFYGF
Sbjct: 2 EEVDLSQDLYQWVNLTKNEKHFISHVLAFFAASDGIVLENLAGRFLKDVQIPEARAFYGF 61
Query: 102 QIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERL 161
QIAIENIHSEMYSLLLETYI+DS EK RLF+AI T+PCVA+KA WA+ WI S +FAER+
Sbjct: 62 QIAIENIHSEMYSLLLETYIRDSKEKARLFNAINTIPCVARKAEWAMRWIQSSGSFAERI 121
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS 221
++FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL++KLS
Sbjct: 122 VSFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLKSKLS 181
Query: 222 EERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVAN 281
EERVKA+V++AV+IEREFVC+AL C LVGMN LMSQYI+F+ADRLL ALG+GK+Y V N
Sbjct: 182 EERVKAIVRDAVDIEREFVCEALSCDLVGMNATLMSQYIKFIADRLLVALGHGKMYHVEN 241
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
PFDWM+LISLQGKTNFFE+RVG+YQKAS+MSS++ GNHVFK+DEDF
Sbjct: 242 PFDWMDLISLQGKTNFFERRVGDYQKASIMSSISNAEGNHVFKMDEDF 289
>gi|290977320|ref|XP_002671386.1| predicted protein [Naegleria gruberi]
gi|284084954|gb|EFC38642.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 263/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EE LL NP RF +FP++YP+IWEMYKKA ASFWTAEEVDL D+ W LT +E+HF+
Sbjct: 18 EEALLKENPHRFVLFPLEYPKIWEMYKKAMASFWTAEEVDLHTDITQWTTLTPNEQHFIK 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL +FM EVQ+ EAR FYGFQIAIENIH+EMYS L+ET IKD
Sbjct: 78 SVLAFFAASDGIVNENLCQQFMAEVQIPEARCFYGFQIAIENIHAEMYSTLIETLIKDQR 137
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E++RLF+AI+TVP V KKA WA+ WI+ FAERL+AFACVEGIFFSGSFC+IFWLKKR
Sbjct: 138 ERHRLFNAIDTVPSVQKKARWAMKWINNENLFAERLLAFACVEGIFFSGSFCSIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLR-TKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGL FSNELISRDEGLH DFACLLYS L+ TKL ++ V +LV EAVEIE+EF+C++L
Sbjct: 198 GLMPGLAFSNELISRDEGLHTDFACLLYSTLKFTKLPQQVVHSLVSEAVEIEKEFICESL 257
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIE VADRLL +LGY K+Y NPFDWM +IS+ GKTNFFEK+VGE
Sbjct: 258 PVDLIGMNSRLMQQYIEMVADRLLVSLGYDKIYNSPNPFDWMNIISVSGKTNFFEKKVGE 317
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
Y KA++MSS + VF++D+DF
Sbjct: 318 YAKANIMSS----KKDKVFRLDDDF 338
>gi|325559284|gb|ADZ30659.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT +EKHF+ H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQV EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERL+AFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLVAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|148230557|ref|NP_001080772.1| ribonucleotide reductase M2 polypeptide [Xenopus laevis]
gi|28839018|gb|AAH47975.1| Rrm2-prov protein [Xenopus laevis]
Length = 386
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 263/329 (79%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P +EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+D++HWE+L DE+
Sbjct: 62 PRFTDEPLLKDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKTDER 121
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 122 YFISHVLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 181
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 182 KDPKERGFLFNAIETLPCVKKKADWALRWISDKQATYGERVVAFAAVEGIFFSGSFASIF 241
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV L+ AV+IE+EF+
Sbjct: 242 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFRHLVHKPSEERVVQLITNAVQIEQEFL 301
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG+ K++ +NPFD+ME ISL+GKTNFFEK
Sbjct: 302 TEALPVNLIGMNCTLMKQYIEFVADRLLLELGFNKVFKASNPFDFMENISLEGKTNFFEK 361
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQK VMS N F +D DF
Sbjct: 362 RVGEYQKMGVMSKPKDN----TFTLDADF 386
>gi|256421019|ref|YP_003121672.1| ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
2588]
gi|256035927|gb|ACU59471.1| Ribonucleoside-diphosphate reductase [Chitinophaga pinensis DSM
2588]
Length = 323
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 264/327 (80%), Gaps = 5/327 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ E LL N DRF + PI YP++WE YK+ EASFWTAEE+DLS D++ W L E+H
Sbjct: 2 NLENELLLKENKDRFVLLPINYPKVWEKYKQHEASFWTAEEIDLSADMKDWNNLNDGERH 61
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+THVLAFFAASDGIV ENLA FM+EVQ+ EAR FYGFQI +ENIHSE Y+LL++TY+K
Sbjct: 62 FITHVLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYVK 121
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D EK+RLFHAIETVP V KKA WAL WI+ FAERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 122 DPVEKDRLFHAIETVPAVTKKAKWALRWIENG-NFAERLVAFAAVEGIFFSGSFCSIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHC+FACLLY +L +L EE+V ++++AV IE+EF+ D
Sbjct: 181 KKRGLMPGLTFSNELISRDEGLHCEFACLLYGMLENRLPEEQVHTIIRDAVAIEKEFITD 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP AL+GMN +LMS+YIEFVADR L LGY K++ ANPFD+ME+ISLQGKTNFFEKRV
Sbjct: 241 ALPVALIGMNSKLMSEYIEFVADRWLSELGYTKIFNTANPFDFMEMISLQGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
G+YQKA VMS + F +DEDF
Sbjct: 301 GDYQKAGVMSGKD----TQTFSLDEDF 323
>gi|74207686|dbj|BAE40088.1| unnamed protein product [Mus musculus]
Length = 390
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++H LAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHALAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVMAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K +E+RV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>gi|294890631|ref|XP_002773236.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239878288|gb|EER05052.1| ribonucleotide reductase small subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 350
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 226/338 (66%), Positives = 271/338 (80%), Gaps = 13/338 (3%)
Query: 5 PEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFV 64
P+E LL NP R+ MFPI+Y IWEMYKK EASFWTAEE+DLSQDLR WE L+ +++HF+
Sbjct: 13 PKEDLLKENPHRYVMFPIKYLAIWEMYKKHEASFWTAEEIDLSQDLRDWENLSDNDRHFI 72
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIVLENL+ +F EVQ EARAFYGFQIA+ENIHSE YSLL++ YIKD
Sbjct: 73 SHVLAFFAASDGIVLENLSAKFSGEVQCPEARAFYGFQIAMENIHSETYSLLIDNYIKDP 132
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+++F AIETVP V KKA WAL+WI+ F+ERLIAFACVEGI FSGSFCAI+WLKK
Sbjct: 133 AEKDKIFRAIETVPSVRKKAEWALSWINDDNCFSERLIAFACVEGILFSGSFCAIYWLKK 192
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-TKLSEERVKALVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEGLH DFACLLY+++ T+L +ERV +V+ AV++ER F+ ++
Sbjct: 193 RGLMPGLTFSNELISRDEGLHADFACLLYNMMHYTRLPDERVHEIVRGAVDVERVFISES 252
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM +YIEFVADRLL ALG+ KLY NPFDWM++ISLQGKTNFFEKRVG
Sbjct: 253 LPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNATNPFDWMKMISLQGKTNFFEKRVG 312
Query: 304 EYQKASVM--SSLNGNGGNHV----------FKIDEDF 329
EYQK VM ++ + NG F +DEDF
Sbjct: 313 EYQKGGVMAGTAAHKNGSMDAEERRKSIGADFALDEDF 350
>gi|326797773|ref|YP_004315592.1| ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
gi|326548537|gb|ADZ76922.1| Ribonucleoside-diphosphate reductase [Sphingobacterium sp. 21]
Length = 323
Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/327 (69%), Positives = 262/327 (80%), Gaps = 5/327 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S E LL N DRF + PI YP IW+MYKK EASFWTAEE+DLS DL+ W L E+H
Sbjct: 2 SQENEVLLRENKDRFVILPINYPAIWDMYKKHEASFWTAEEIDLSGDLKDWANLNDGERH 61
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENLA FM+EVQ+ EAR+FYGFQIA+ENIHSE Y+LL++TY+K
Sbjct: 62 FISHVLAFFAASDGIVNENLAINFMSEVQLPEARSFYGFQIAMENIHSETYALLIDTYVK 121
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D EK+RLFHAIETV CV KKA WAL WI+ +FAERL+AFA VEGIFFSGSFCAIFWL
Sbjct: 122 DPVEKDRLFHAIETVECVKKKAEWALRWIENG-SFAERLVAFAAVEGIFFSGSFCAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHC+FACLLYS+L KL +ERV+ ++ +AVEIE+EF+ D
Sbjct: 181 KKRGLMPGLTFSNELISRDEGLHCEFACLLYSMLEAKLPKERVQEIIIDAVEIEKEFITD 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN +LM QYIEFVADR L LG K Y NPFD+MELISLQGKTNFFEKRV
Sbjct: 241 ALPVKLIGMNADLMKQYIEFVADRWLVELGNSKYYNATNPFDFMELISLQGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
G+YQK+ V G G F +DEDF
Sbjct: 301 GDYQKSGV----TGEKGKASFSLDEDF 323
>gi|348566413|ref|XP_003468996.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Cavia porcellus]
Length = 388
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 269/329 (81%), Gaps = 6/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL +E+
Sbjct: 65 PSVEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KK+ WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDSREREFLFNAIETMPCV-KKSDWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 243
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + SE+RVK ++ AV IE+EF+
Sbjct: 244 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLMHRPSEQRVKEIIVNAVRIEQEFL 303
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN ELM QYIEFVADRL+ LG+GK++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 304 TEALPVKLIGMNCELMKQYIEFVADRLMLELGFGKVFQVENPFDFMENISLEGKTNFFEK 363
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 364 RVGEYQRMGVMSSPTENS----FTLDADF 388
>gi|71648907|ref|XP_813233.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
strain CL Brener]
gi|70878098|gb|EAN91382.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 263/325 (80%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+Y IW+ YK++E+S WT EE+DLS DL WE + EK F+
Sbjct: 16 EEPLLRENPDRYVIFPIKYHDIWKKYKESESSIWTVEEIDLSSDLADWEKMNEGEKFFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFMTEVQV E R FYGFQIAIEN+HSE YS+LL+TYI D++
Sbjct: 76 HVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTYITDTE 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+R+ HAI T+PC+ KKA WA+ WI S +FAERL+AFA VEGIFFSGSFCA+FWLKKR
Sbjct: 136 EKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + + KL +ER++ ++ AV+IEREF+CDA+
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPKERIREIICSAVDIEREFICDAI 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LMS YIEFVADRLL ALG + Y NPFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLLGMNADLMSTYIEFVADRLLVALGNERHYNSKNPFDFMEMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS G VF +D +F
Sbjct: 316 YQKAGVMSS---EGTTKVFSLDAEF 337
>gi|321476700|gb|EFX87660.1| hypothetical protein DAPPUDRAFT_306462 [Daphnia pulex]
Length = 378
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/324 (69%), Positives = 264/324 (81%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+ W+ L +E+HFV+H
Sbjct: 57 EPLLRSNPSRFVLFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLKDWDNLQPNERHFVSH 116
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL+ETYIKDS E
Sbjct: 117 VLAFFAASDGIVNENLVERFAQEVQVPEARCFYGFQIAMENIHSEMYSLLIETYIKDSAE 176
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ RLF+A+ET+PC+AKKA WA+ WI + ++ER++AFA VEGIFFSGSF AIFWLKKR
Sbjct: 177 RTRLFNAVETMPCIAKKAEWAMKWIGNKDAPYSERIVAFAAVEGIFFSGSFAAIFWLKKR 236
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFAC+++ L K +ER+ ++ AV+IE+EF+ DALP
Sbjct: 237 GLMPGLTFSNELISRDEGLHTDFACVMFKHLVNKPPKERIIEIINNAVKIEQEFLTDALP 296
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LM QYIEFVADRLL LG KLY NPFD+ME ISL+GKTNFFEK+VGEY
Sbjct: 297 VEMIGMNCRLMRQYIEFVADRLLLELGCTKLYNSENPFDFMEHISLEGKTNFFEKKVGEY 356
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM+S GN HVF +DEDF
Sbjct: 357 QKAGVMNS-KGNSA-HVFTLDEDF 378
>gi|56713400|gb|AAW23440.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
gi|56713684|gb|AAW23722.1| ribonucleoside-diphosphate reductase [Vaccinia virus]
gi|88854075|gb|ABD52493.1| ribonucleoside-diphosphate reductase subunit [Vaccinia virus]
gi|167412519|gb|ABZ79953.1| ribonucleotide reductase small subunit [Vaccinia virus GLV-1h68]
Length = 319
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|44971395|gb|AAS49745.1| RPXV032 [Rabbitpox virus]
gi|373447703|gb|AEY73087.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373447945|gb|AEY73328.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|439965889|gb|AGB75763.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|343470797|emb|CCD16606.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343476067|emb|CCD12726.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 341
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/327 (67%), Positives = 266/327 (81%), Gaps = 4/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ EEPLL NP R+ +FPI+Y IW+MYK+AE+S WT EE+DL D+ WE L E+HF
Sbjct: 18 VAEEPLLKENPGRYVLFPIKYHDIWKMYKEAESSIWTVEEIDLGNDMVDWEKLDNGERHF 77
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ HVLAFFAASDGIVLENLA RFM+EVQV EAR FYGFQIAIEN+HSE YS+L++TYI D
Sbjct: 78 IKHVLAFFAASDGIVLENLAQRFMSEVQVPEARCFYGFQIAIENVHSETYSVLIDTYITD 137
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++EKN L +AI T+PC+ +KA WA+ WI +FA RL+AFA VEGIFFSGSFCA+FWLK
Sbjct: 138 TEEKNNLLNAISTIPCIKRKADWAIRWIGCDSSFATRLVAFAAVEGIFFSGSFCALFWLK 197
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCD 242
KRGLMPGLTFSNELISRDEGLH DFACLLY ++ KLS E + +++ +AV IEREF+CD
Sbjct: 198 KRGLMPGLTFSNELISRDEGLHTDFACLLYEKYIKHKLSREEILSIICDAVSIEREFICD 257
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN +LM+QYIEFVADRL+ ALGY + Y V NPFD+ME+ISLQGKTNFFEK+V
Sbjct: 258 ALPVRLIGMNSDLMAQYIEFVADRLIVALGYERHYNVKNPFDFMEMISLQGKTNFFEKKV 317
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
GEYQKA VMSS +G + VF ++ DF
Sbjct: 318 GEYQKAGVMSS---DGSSKVFDLNADF 341
>gi|395509266|ref|XP_003758922.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Sarcophilus harrisii]
Length = 438
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/325 (69%), Positives = 263/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF +FPI+Y IW MYKKAEASFWTAEEVDLS+D++HWEAL +EK+F++
Sbjct: 118 DEPLLRENPRRFVIFPIEYQDIWHMYKKAEASFWTAEEVDLSKDIQHWEALKPEEKYFIS 177
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKDS
Sbjct: 178 HVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSK 237
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 238 EREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKK 297
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK ++ AV IE+EF+ +AL
Sbjct: 298 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVKEIIINAVRIEQEFLTEAL 357
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL+ LG+ K++ NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 358 PVKLIGMNCTLMKQYIEFVADRLMLELGFSKIFRAENPFDFMENISLEGKTNFFEKRVGE 417
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VMSS GN F +D DF
Sbjct: 418 YQRMGVMSSSTGNS----FTLDADF 438
>gi|325559071|gb|ADZ30447.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT +EKHF+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKHFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|71416121|ref|XP_810103.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma cruzi
strain CL Brener]
gi|70874586|gb|EAN88252.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 262/325 (80%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+Y IW+ YK+AE+S WT EE+DLS DL WE + EK F+
Sbjct: 16 EEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMNEGEKFFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFMTEVQV E R FYGFQIAIEN+HSE YS+LL+TYI D++
Sbjct: 76 HVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTYITDTE 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+R+ HAI T+PC+ KKA WA+ WI S +FAERL+AFA VEGIFFSGSFCA+FWLKKR
Sbjct: 136 EKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + + KL ER++ ++ AV+IEREF+CD++
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPTERIREIICSAVDIEREFICDSI 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LMS YIEFVADRLL ALG + Y NPFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLLGMNADLMSTYIEFVADRLLVALGNERHYNSKNPFDFMEMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS G VF +D +F
Sbjct: 316 YQKAGVMSS---EGTTKVFSLDAEF 337
>gi|383866746|gb|AFH54589.1| ribonucleotide reductase small subunit [Ectromelia virus]
Length = 319
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/323 (70%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQV EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|395828551|ref|XP_003787435.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Otolemur garnettii]
Length = 388
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE L +E+
Sbjct: 64 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEER 123
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 124 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 183
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 184 KDSQEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 243
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV+IE+EF+
Sbjct: 244 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVKIEQEFL 303
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 304 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVFRVENPFDFMENISLEGKTNFFEK 363
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 364 RVGEYQRMGVMSSPTENS----FTLDADF 388
>gi|373447466|gb|AEY72851.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448186|gb|AEY73568.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448417|gb|AEY73798.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448658|gb|AEY74038.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373448899|gb|AEY74278.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373449129|gb|AEY74507.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|373449370|gb|AEY74747.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|56404698|sp|O57175.1|RIR2_VACCA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|2772676|gb|AAB96415.1| ribonucleotide reductase, small subunit [Vaccinia virus]
gi|47088360|gb|AAT10430.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|160857924|emb|CAM58212.1| ribonucleotide reductase small subunit [Vaccinia virus Ankara]
gi|325514058|gb|ADZ24052.1| ribonucleotide reductase small subunit protein [Cowpox virus]
gi|325557783|gb|ADZ29165.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|255080138|ref|XP_002503649.1| predicted protein [Micromonas sp. RCC299]
gi|226518916|gb|ACO64907.1| predicted protein [Micromonas sp. RCC299]
Length = 324
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 264/324 (81%), Gaps = 3/324 (0%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
+L N DRFC+FPI+ +W+MYK+AEASFW+AEE+DLS D + W L +E+HF++HVL
Sbjct: 1 MLQDNEDRFCLFPIKEHAVWKMYKQAEASFWSAEEIDLSMDYKDWVTLNDNEQHFISHVL 60
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFAASDGIVLENL RFM +VQ+ EARAFY FQ+AIENIHSE Y LL++TY+KDS +K
Sbjct: 61 AFFAASDGIVLENLGLRFMKDVQLPEARAFYAFQLAIENIHSETYGLLIDTYVKDSVKKR 120
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF AI VP VA+KA WAL WI SE FAERL+AFACVEGIFFSGSFCAIFWLKKRGLM
Sbjct: 121 HLFRAIHNVPTVARKAQWALKWIQSSECFAERLVAFACVEGIFFSGSFCAIFWLKKRGLM 180
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCAL 248
GLTFSNELISRDEGLHCDFACLLYS+L+ L R++ +VK+AV+IE+EFVCDAL CAL
Sbjct: 181 RGLTFSNELISRDEGLHCDFACLLYSMLKHPLDPARLQEIVKDAVDIEKEFVCDALSCAL 240
Query: 249 VGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
VGMN +LMS+YIEFVADRL+ LG K++ NPF+WME+ISLQGK NFFE RV +YQKA
Sbjct: 241 VGMNADLMSEYIEFVADRLMTQLGVEKVWNTPNPFEWMEMISLQGKANFFEHRVDQYQKA 300
Query: 309 SVMSSLNGNGG---NHVFKIDEDF 329
+VM+S+ G N+VF+ D DF
Sbjct: 301 NVMTSVQGKCDGFENYVFRTDLDF 324
>gi|351701528|gb|EHB04447.1| Ribonucleoside-diphosphate reductase subunit M2 [Heterocephalus
glaber]
Length = 389
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL +E+
Sbjct: 65 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDVQHWEALKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPMENS----FTLDADF 389
>gi|111184227|gb|ABH08147.1| HSPV044 [Horsepox virus]
Length = 319
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|149408710|ref|XP_001506085.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Ornithorhynchus anatinus]
Length = 394
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+D++HWE+L +EK
Sbjct: 70 PRVEDEPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEEK 129
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 130 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 189
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
K+ E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 190 KEPKEREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 249
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK ++ AV IE+EF+
Sbjct: 250 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVKEIIINAVRIEQEFL 309
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLLLELGFSKIFKVENPFDFMENISLEGKTNFFEK 369
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 370 RVGEYQRMGVMSSSTENS----FTLDADF 394
>gi|325557997|gb|ADZ29378.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 319
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSTGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|407839735|gb|EKG00364.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi]
Length = 337
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 262/325 (80%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+Y IW+ YK+AE+S WT EE+DLS DL WE + EK F+
Sbjct: 16 EEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMNEGEKFFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFMTEVQV E R FYGFQIAIEN+HSE YS+LL+TYI D++
Sbjct: 76 HVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDTYITDTE 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+R+ HAI T+PC+ KKA WA+ WI S +FAERL+AFA VEGIFFSGSFCA+FWLKKR
Sbjct: 136 EKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + + KL ER++ ++ AV+IEREF+CD++
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPTERIREIICSAVDIEREFICDSI 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LMS YIEFVADRLL ALG + Y NPFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLLGMNADLMSTYIEFVADRLLVALGNERHYNSKNPFDFMEMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS G VF +D +F
Sbjct: 316 YQKAGVMSS---EGTTKVFSLDAEF 337
>gi|66275840|ref|YP_232925.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|132629|sp|P11158.1|RIR2_VACCV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335624|gb|AAA48244.1| F4L protein [Vaccinia virus]
gi|335809|gb|AAA88680.1| ribonucleotide reductase (EC 1.17.4.1) small subunit [Vaccinia
virus]
gi|29692149|gb|AAO89322.1| ribonucleotide reductase small subunit [Vaccinia virus WR]
Length = 319
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|90660281|gb|ABD97395.1| ribonucleotide reductase small subunit [Cowpox virus]
gi|325558644|gb|ADZ30022.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 16 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAF VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFTAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|132628|sp|P20493.1|RIR2_VACCC RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335366|gb|AAA48018.1| putative F4L [Vaccinia virus Copenhagen]
Length = 319
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|22164633|ref|NP_671546.1| EVM028 [Ectromelia virus]
gi|22123774|gb|AAM92332.1|AF523264_28 EVM028 [Ectromelia virus]
Length = 319
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQV EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQVTEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEF+ADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFIADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|338714129|ref|XP_001502384.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Equus
caballus]
Length = 413
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL +E+
Sbjct: 89 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEER 148
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 149 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 208
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 209 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 268
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 269 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFL 328
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 329 TEALPVRLIGMNCALMKQYIEFVADRLLLELGFNKVFRVENPFDFMENISLEGKTNFFEK 388
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 389 RVGEYQRMGVMSSPTENS----FTLDADF 413
>gi|301772278|ref|XP_002921557.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Ailuropoda melanoleuca]
Length = 393
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 69 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 129 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 189 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVREIIINAVRIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 309 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 369 RVGEYQRMGVMSSPTENS----FTLDADF 393
>gi|344280318|ref|XP_003411931.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Loxodonta africana]
Length = 386
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/328 (68%), Positives = 266/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL +E++
Sbjct: 63 SVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEERY 122
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
DS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIINAVRIEQEFLT 302
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 EALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKVFKVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMSS N F +D DF
Sbjct: 363 VGEYQRMGVMSSPTENS----FTLDADF 386
>gi|2465173|emb|CAA71741.1| ribonucleotide reductase (Class I) [Trypanosoma brucei brucei]
Length = 337
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+YP IW+ YKKAE+S WT EE+DL D+ WE L E+HF+
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ D D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + KL +RV ++ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL +LGY + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|73979721|ref|XP_540076.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Canis lupus familiaris]
Length = 394
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 70 PSAEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 129
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 130 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 189
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 190 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 249
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 250 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFL 309
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 369
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 370 RVGEYQRMGVMSSPTENS----FTLDADF 394
>gi|37551487|gb|AAQ93139.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|38348909|gb|AAR17885.1| ribonucleotide reductase small subunit [Vaccinia virus]
gi|88900660|gb|ABD57572.1| VACV040 [Vaccinia virus]
gi|90819703|gb|ABD98513.1| VACV-DUKE-051 [Vaccinia virus]
gi|373447227|gb|AEY72613.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ ++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRYIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|363732458|ref|XP_001231545.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Gallus gallus]
Length = 384
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/325 (69%), Positives = 263/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HWE+L +EK+F++
Sbjct: 64 EEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPEEKYFIS 123
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKDS
Sbjct: 124 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSK 183
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV KKA WA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 184 EREFLFNAIETLPCVKKKADWAIRWIGDKKATYGERVVAFAAVEGIFFSGSFASIFWLKK 243
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK ++ AV IE+EF+ +AL
Sbjct: 244 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVKEIIMNAVLIEQEFLTEAL 303
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 304 PVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYKVENPFDFMENISLEGKTNFFEKRVGE 363
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VMS N F +D +F
Sbjct: 364 YQRMGVMSKPTDNS----FTLDAEF 384
>gi|340500115|gb|EGR27014.1| ribonucleoside-diphosphate reductase small chain, putative
[Ichthyophthirius multifiliis]
Length = 366
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 216/323 (66%), Positives = 264/323 (81%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L NP+RF MFPI+Y +IWEMYKK ASFWTA+E+DL QDL+ WE LT E+HF+ +
Sbjct: 48 EPILQENPNRFVMFPIKYNKIWEMYKKELASFWTADEIDLYQDLKDWERLTDGERHFIKY 107
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +FM EVQ+ EARAFYGFQIA+ENIHSE YSLL++TYIKD +E
Sbjct: 108 VLAFFAASDGIVLENLAEQFMCEVQIPEARAFYGFQIAMENIHSETYSLLIDTYIKDDNE 167
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF A +P + KKA WAL WI+ ++ FA RL+AFA +EGIFFSGSFCAIFWLKKR
Sbjct: 168 KEFLFKACLNIPVINKKAQWALKWINNNDNFASRLVAFAAIEGIFFSGSFCAIFWLKKRS 227
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLLYS+++ KL++E V ++ EAVEIE+EF+ +ALP
Sbjct: 228 LMPGLTFSNELISRDEGLHTDFACLLYSMMQNKLAKEEVNVIIAEAVEIEKEFISEALPV 287
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +M +Y+EFVADRLL +LGY KL+ NPF+WM++I +QGKTNFFEKRVGEYQ
Sbjct: 288 ELIGMNSNMMKEYLEFVADRLLYSLGYPKLFNSKNPFEWMDMICIQGKTNFFEKRVGEYQ 347
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VMSS + VF+++ DF
Sbjct: 348 KSGVMSS----KEDKVFRLNADF 366
>gi|327261313|ref|XP_003215475.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 3 [Anolis carolinensis]
Length = 391
Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P +EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HWE+L DEK
Sbjct: 67 PRRTDEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPDEK 126
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++H+LAFFAASDGIV ENL RF E+QV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 127 YFISHILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 186
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV +KA WA+ WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 187 KDPKEREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFAAVEGIFFSGSFASIF 246
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 247 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIITNAVRIEQEFL 306
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K+Y NPFD+ME ISL+GKTNFFEK
Sbjct: 307 TEALPVNLIGMNCTLMKQYIEFVADRLILELGFNKIYKAENPFDFMENISLEGKTNFFEK 366
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N F +D DF
Sbjct: 367 RVGEYQRMGVMSKAVDNS----FTLDADF 391
>gi|1808636|emb|CAA64118.1| G4L protein [Cowpox virus]
Length = 319
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKR
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRD 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE VK+++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVKSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|373449611|gb|AEY74987.1| ribonucleotide reductase small subunit [Vaccinia virus]
Length = 319
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNR 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|325558213|gb|ADZ29593.1| ribonucleotide reductase small subunit protein [Cowpox virus]
gi|325558859|gb|ADZ30236.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|213511642|ref|NP_001133495.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
gi|209154228|gb|ACI33346.1| Ribonucleoside-diphosphate reductase subunit M2 [Salmo salar]
Length = 387
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 265/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D +HW++L +E++F++
Sbjct: 67 EEPLLKENPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDTQHWDSLKDEERYFIS 126
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD
Sbjct: 127 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 186
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF+AIET+PCV +KA WALNWI + + F ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 187 ERDYLFNAIETLPCVKRKADWALNWIGNKNAGFGERVVAFAAVEGIFFSGSFAAIFWLKK 246
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K S+E V L++ AVEIE+EF+ AL
Sbjct: 247 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSKETVTKLIRNAVEIEQEFLTKAL 306
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 307 PVKLIGMNCDLMTQYIEFVADRLMLELGFDKIYRVENPFDFMENISLEGKTNFFEKRVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VMS N F++D DF
Sbjct: 367 YQRMGVMSGTTDNA----FRLDADF 387
>gi|442754007|gb|JAA69163.1| Putative ribonucleotide reductase beta subunit [Ixodes ricinus]
Length = 376
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/325 (68%), Positives = 263/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF MFPI Y IW MYKKAEASFWT EEVDL +DL HW+ L +E+HF++
Sbjct: 56 DEPLLRENPRRFVMFPIVYEDIWRMYKKAEASFWTVEEVDLGKDLPHWDGLKPEERHFIS 115
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIEN+HSEMYSLL++TYIKD
Sbjct: 116 HILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQMAIENVHSEMYSLLIDTYIKDPS 175
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++RLF+A+ET+PC+ +KA WALNWI + S TF ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 176 ERDRLFNAVETMPCIKRKADWALNWIGNRSATFGERIVAFAAVEGIFFSGSFASIFWLKK 235
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACL++S L K S+ERV+ ++ +AV IE+EF+ DAL
Sbjct: 236 RGLMPGLTFSNELISRDEGLHTDFACLMFSHLXNKPSQERVRQIICDAVVIEQEFLTDAL 295
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN ELM +YIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 296 PVALIGMNCELMKRYIEFVADRLLVELGCEKVYNSENPFDFMEHISLEGKTNFFEKRVGE 355
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM+ N VF +D DF
Sbjct: 356 YQKAGVMA----NKEEQVFTLDADF 376
>gi|325558427|gb|ADZ29806.1| ribonucleotide reductase small subunit protein [Cowpox virus]
Length = 333
Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 16 EQILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|330804590|ref|XP_003290276.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
gi|325079602|gb|EGC33194.1| hypothetical protein DICPUDRAFT_56591 [Dictyostelium purpureum]
Length = 335
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 217/335 (64%), Positives = 269/335 (80%), Gaps = 6/335 (1%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTAD 59
M I EEP+L N DRF +FPI+YP IW MYK+AEASFWTAEE+DL+ DL W + L +
Sbjct: 1 MNQIIEEPILKENKDRFVLFPIKYPDIWSMYKQAEASFWTAEEIDLAPDLNDWSSKLNDN 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+++VLAFFAASDGIV ENLA RFM+EVQ+ EAR FYGFQIAIENIHSE YSLL++T
Sbjct: 61 ERHFISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD+++K++LF+AI+T+PC+ KKA WAL WI+ S++FAERL+AFA VEGIFFSGSFC+I
Sbjct: 121 YIKDNEQKSKLFNAIDTIPCIKKKADWALKWINNSDSFAERLVAFAAVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHC+FACLLY+ L KL + ++A++++AV E+EF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCNFACLLYTKLINKLESKTLEAIIRDAVVCEKEF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+CD+LP L+GMN MSQYIEF ADRLL +LGY K+Y +NPFDWME+ISLQ KTNFFE
Sbjct: 241 ICDSLPVDLIGMNSRSMSQYIEFCADRLLVSLGYKKIYNASNPFDWMEMISLQRKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGN-----GGNHVFKIDEDF 329
+V EY K V + N + +DE+F
Sbjct: 301 GKVAEYAKTGVAIQKSNNQQTSSTQSRTLVLDEEF 335
>gi|266919|sp|P29883.1|RIR2_VACCP RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|335710|gb|AAA48294.1| F14 [Vaccinia virus]
Length = 319
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W +T DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKVTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGF++AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>gi|327261311|ref|XP_003215474.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Anolis carolinensis]
Length = 390
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HWE+L DEK+F++
Sbjct: 70 DEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPDEKYFIS 129
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF E+QV EAR FYGFQIA+ENIHSEMYSLL++TYIKD
Sbjct: 130 HILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 189
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV +KA WA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 190 EREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFAAVEGIFFSGSFASIFWLKK 249
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+ +AL
Sbjct: 250 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIITNAVRIEQEFLTEAL 309
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL+ LG+ K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 310 PVNLIGMNCTLMKQYIEFVADRLILELGFNKIYKAENPFDFMENISLEGKTNFFEKRVGE 369
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VMS N F +D DF
Sbjct: 370 YQRMGVMSKAVDNS----FTLDADF 390
>gi|156545974|ref|XP_001606963.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Nasonia vitripennis]
Length = 388
Score = 466 bits (1198), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/324 (69%), Positives = 260/324 (80%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQ+P IW MYKKAEASFWT EEVDLS+D+ W L +E+HF++H
Sbjct: 67 EPLLKENPGRFVLFPIQWPDIWHMYKKAEASFWTVEEVDLSKDMADWNRLNDNERHFISH 126
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIENIHSEMYSLL++TYI D+ +
Sbjct: 127 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENIHSEMYSLLIDTYISDASQ 186
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF+AIET+PCVAKKA WALNWI S TFAER+IAFA VEGIFFSGSF AIFWLKKR
Sbjct: 187 RQFLFNAIETLPCVAKKANWALNWISHDSATFAERVIAFAAVEGIFFSGSFAAIFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ + K SEERV +++K+AV IE+EF+ DALP
Sbjct: 247 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSEERVISIIKDAVTIEQEFLTDALP 306
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LM QYIEFVADRLLG LG K+Y NPFD+ME ISL+GKTNFFEK+VGEY
Sbjct: 307 VEMIGMNCRLMCQYIEFVADRLLGELGCPKVYNSENPFDFMEHISLEGKTNFFEKKVGEY 366
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM G N F ++ DF
Sbjct: 367 QKWGVMQDRTGTENN--FSLEADF 388
>gi|355717368|gb|AES05910.1| ribonucleotide reductase M2 polypeptide [Mustela putorius furo]
Length = 391
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/328 (67%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P++ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 68 PNVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 127
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 128 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 187
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 188 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 247
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AV IE+EF+
Sbjct: 248 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVREIIINAVRIEQEFL 307
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+GK++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 308 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 367
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDED 328
RVGEYQ+ VMSS N F +D D
Sbjct: 368 RVGEYQRMGVMSSPTENS----FTLDAD 391
>gi|17974949|ref|NP_536463.1| C10L [Monkeypox virus Zaire-96-I-16]
gi|17529816|gb|AAL40494.1|AF380138_36 C10L [Monkeypox virus Zaire-96-I-16]
gi|51342196|gb|AAU01240.1| MPXV-WRAIR030 [Monkeypox virus]
gi|58220500|gb|AAW67788.1| MPXV-SL-030 [Monkeypox virus]
gi|59858836|gb|AAX09131.1| MPXV-COP-030 [Monkeypox virus]
gi|68448710|gb|AAY96833.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68448912|gb|AAY97034.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449113|gb|AAY97234.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449313|gb|AAY97433.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|68449512|gb|AAY97631.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|300872658|gb|ADK39060.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|451327718|gb|AGF36590.1| ribonucleotide reductase small subunit [Monkeypox virus]
gi|451327926|gb|AGF36797.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ ++ AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|74025550|ref|XP_829341.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834727|gb|EAN80229.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
gi|261335315|emb|CBH18309.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+YP IW+ YK+AE+S WT EE+DL D+ WE L E+HF+
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ D D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + KL +RV ++ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL +LGY + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|339246545|ref|XP_003374906.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
gi|316971821|gb|EFV55552.1| ribonucleotide reductase R2 subunit [Trichinella spiralis]
Length = 366
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF + P++YP IW MYKKAEASFWT EEVDL +D W L DEKHF++
Sbjct: 46 EEPLLRSNPKRFVLLPLEYPDIWAMYKKAEASFWTVEEVDLRKDANDWAKLNKDEKHFIS 105
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF E+QV EAR FYGFQIAIEN+HSEMYSLL++TYI+D
Sbjct: 106 HVLAFFAASDGIVFENLVERFSQEIQVTEARFFYGFQIAIENVHSEMYSLLIDTYIRDPV 165
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF+AIET+PCV KKA WAL WI D F ERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 166 ERDFLFNAIETIPCVKKKADWALRWIGDRQSPFCERLVAFAAVEGIFFSGSFASIFWLKK 225
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACLLYS L+ K +E+RV+ ++ EAV IE+EF+ DAL
Sbjct: 226 RGLMPGLTFSNELISRDEGLHCDFACLLYSHLKKKPTEDRVRQIITEAVSIEQEFLTDAL 285
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMSQYIE+VADRLL LG K+Y NPFD+ME+ISL+GKTNFFEKRVGE
Sbjct: 286 PVRLIGMNCVLMSQYIEYVADRLLVELGCSKVYNSENPFDFMEMISLEGKTNFFEKRVGE 345
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM+ + VF +D +F
Sbjct: 346 YQKAGVMA----DRSQQVFTLDAEF 366
>gi|327269406|ref|XP_003219485.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Anolis carolinensis]
Length = 414
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 262/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPI YP IW+MYKKA+ASFWTAEEVDLS+D HW L ++EK+F++
Sbjct: 94 EEPLLRKNPRRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKDFPHWNKLKSEEKYFIS 153
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYIKD +
Sbjct: 154 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 213
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF+AIET+PCV KKA WAL WI D TF ER++AFA VEGIFFSG+F AIFWLKK
Sbjct: 214 ERDFLFNAIETMPCVKKKADWALRWIRDRKATFGERVVAFASVEGIFFSGAFAAIFWLKK 273
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 274 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 333
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 334 PVGLIGMNCTLMKQYIEFVADRLLLELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 393
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N N VF +D DF
Sbjct: 394 YQRFAVMAETNDN----VFTLDADF 414
>gi|407406733|gb|EKF30906.1| ribonucleoside-diphosphate reductase small chain, putative
[Trypanosoma cruzi marinkellei]
Length = 337
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 261/325 (80%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+Y IW+ YK+AE+S WT EE+DLS DL WE ++ E+ F+
Sbjct: 16 EEPLLRENPDRYVIFPIKYHDIWKKYKEAESSIWTVEEIDLSSDLADWEKMSEGERFFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFMTEVQV E R FYGFQIAIEN+HSE YS+LL+ YI D
Sbjct: 76 HVLAFFAASDGIVLENLAQRFMTEVQVPEVRCFYGFQIAIENVHSETYSVLLDMYITDPT 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+R+ HAI T+PC+ KKA WA+ WI S +FAERL+AFA VEGIFFSGSFCA+FWLKKR
Sbjct: 136 EKDRMLHAISTIPCIQKKANWAIRWIRSSSSFAERLVAFAAVEGIFFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + + KL +ER++ ++ AV+IEREF+CDA+
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYENYIVNKLPKERIRDIICSAVDIEREFICDAI 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LMS YIEFVADRLL ALG + Y NPFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLLGMNADLMSTYIEFVADRLLLALGNERHYNSKNPFDFMEMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS G VF +D +F
Sbjct: 316 YQKAGVMSS---EGTTKVFSLDAEF 337
>gi|3914640|sp|O15910.1|RIR2_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|2411479|gb|AAB70705.1| ribonucleotide reductase small subunit [Trypanosoma brucei]
gi|261335314|emb|CBH18308.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+YP IW+ YK+AE+S WT EE+DL D+ WE L E+HF+
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ D D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + KL +RV ++ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL +LGY + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|126303832|ref|XP_001381111.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Monodelphis domestica]
Length = 493
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 264/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS +EPLL NP RF +FPI+Y IW MYKKAEASFWTAEEVDLS+D++HWE L ++EK
Sbjct: 169 PSKEDEPLLRENPRRFVIFPIEYHDIWHMYKKAEASFWTAEEVDLSKDIQHWETLKSEEK 228
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 229 YFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 288
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 289 KDPKEREFLFNAIETLPCVKKKADWALRWIGDNEATYGERVVAFAAVEGIFFSGSFASIF 348
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEE+VK ++ AV IE+EF+
Sbjct: 349 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEEKVKEIIINAVRIEQEFL 408
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 409 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKIFRVENPFDFMENISLEGKTNFFEK 468
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 469 RVGEYQRMGVMSSPTENS----FTLDADF 493
>gi|327261309|ref|XP_003215473.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Anolis carolinensis]
Length = 394
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HWE+L DEK+F++
Sbjct: 74 DEPLLRDNPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPDEKYFIS 133
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF E+QV EAR FYGFQIA+ENIHSEMYSLL++TYIKD
Sbjct: 134 HILAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 193
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV +KA WA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 EREYLFNAIETLPCVKRKADWAMRWIGDKHATYGERVVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+ +AL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIITNAVRIEQEFLTEAL 313
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL+ LG+ K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 314 PVNLIGMNCTLMKQYIEFVADRLILELGFNKIYKAENPFDFMENISLEGKTNFFEKRVGE 373
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VMS N F +D DF
Sbjct: 374 YQRMGVMSKAVDNS----FTLDADF 394
>gi|291220709|ref|XP_002730368.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Saccoglossus kowalevskii]
Length = 402
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL HW +L DE+HF++
Sbjct: 82 DEPLLRDNPRRFVIFPIKYHDIWQMYKKAEASFWTAEEVDLSKDLAHWASLKDDERHFIS 141
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF E+QV EAR FYGFQIAIENIHSEMYSLL++TYI+D
Sbjct: 142 HVLAFFAASDGIVNENLVERFSQEIQVTEARCFYGFQIAIENIHSEMYSLLIDTYIRDPQ 201
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+P V +KA WALNWI+ T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 202 EREYLFNAIETLPPVKRKAQWALNWINADNATYGERVVAFAAVEGIFFSGSFASIFWLKK 261
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++S L K S++R+ ++++AV+IE+EF+ DAL
Sbjct: 262 RGLMPGLTFSNELISRDEGLHCDFACLMFSHLTNKPSQQRIIEIIRDAVKIEQEFLTDAL 321
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 322 PVSLIGMNKDLMKQYIEFVADRLLLDLGCNKIYNKENPFDFMENISLEGKTNFFEKRVGE 381
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK VMSS N F ++ DF
Sbjct: 382 YQKMGVMSSPCDNK----FTLEADF 402
>gi|431911830|gb|ELK13974.1| Ribonucleoside-diphosphate reductase subunit M2 [Pteropus alecto]
Length = 364
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/328 (68%), Positives = 263/328 (80%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWE L +E+H
Sbjct: 41 SVQDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEERH 100
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 101 FISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIK 160
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
DS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFW
Sbjct: 161 DSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFW 220
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 221 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFRHLLHKPSEQRVKEIIINAVRIEQEFLT 280
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ NPFD+ME ISL+GKTNFFEKR
Sbjct: 281 EALPVKLIGMNCTLMEQYIEFVADRLMLELGFNKVFRAENPFDFMENISLEGKTNFFEKR 340
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQK VMS N F +D DF
Sbjct: 341 VGEYQKMGVMSGPTENS----FTLDADF 364
>gi|113195221|ref|YP_717351.1| ribonucleotide reductase small subunit [Taterapox virus]
gi|90660497|gb|ABD97610.1| ribonucleotide reductase small subunit [Taterapox virus]
Length = 319
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|444731691|gb|ELW72040.1| Ribonucleoside-diphosphate reductase subunit M2 [Tupaia chinensis]
Length = 357
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL +E+
Sbjct: 33 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPEER 92
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 93 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 152
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 153 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 212
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AV IE+EF+
Sbjct: 213 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVQEIIVNAVRIEQEFL 272
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 273 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 332
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 333 RVGEYQRMGVMSSPTENS----FTLDADF 357
>gi|402890069|ref|XP_003908316.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Papio
anubis]
Length = 389
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>gi|4557845|ref|NP_001025.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Homo
sapiens]
gi|400979|sp|P31350.1|RIR2_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|36155|emb|CAA42181.1| small subunit ribonucleotide reductase [Homo sapiens]
gi|251637|gb|AAA09577.1| ribonucleotide reductase R2 subunit [Homo sapiens]
gi|12804875|gb|AAH01886.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
gi|14029165|gb|AAK51163.1| ribonucleotide reductase M2 subunit [Homo sapiens]
gi|20988810|gb|AAH30154.1| Ribonucleotide reductase M2 polypeptide [Homo sapiens]
gi|62702173|gb|AAX93099.1| unknown [Homo sapiens]
gi|123981920|gb|ABM82789.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
gi|123996753|gb|ABM85978.1| ribonucleotide reductase M2 polypeptide [synthetic construct]
gi|189053955|dbj|BAG36462.1| unnamed protein product [Homo sapiens]
gi|261861600|dbj|BAI47322.1| ribonucleotide reductase M2 [synthetic construct]
Length = 389
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>gi|303272255|ref|XP_003055489.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463463|gb|EEH60741.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 322
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/322 (69%), Positives = 261/322 (81%), Gaps = 1/322 (0%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
+L N DRF +FP+++ ++W+MYK+A ASFW AEE+DLS DLR W LT E+HF++HVL
Sbjct: 1 MLQDNEDRFSLFPVKHVEVWKMYKQAVASFWNAEEIDLSTDLRDWGNLTESEQHFISHVL 60
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFAASDGIVLENL RF+ +VQ+ EARAFYGFQ+A+ENIHSE Y LLLETYIKDS ++
Sbjct: 61 AFFAASDGIVLENLGLRFLKDVQMPEARAFYGFQLAMENIHSETYGLLLETYIKDSVQRK 120
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
L AI TVP V +KA WAL WI SE FAERLIAFACVEGIFFSGSFCAIFWLKKRGLM
Sbjct: 121 HLMRAIHTVPTVGRKAQWALRWIQSSECFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 180
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCAL 248
GLTFSNELISRDEGLHCDFACLLYS+L+ L ER++ +VK+AVEIE+EFVCDAL CAL
Sbjct: 181 RGLTFSNELISRDEGLHCDFACLLYSMLKHPLEPERLQEIVKDAVEIEKEFVCDALSCAL 240
Query: 249 VGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
VGMN +LMS+YIEFVADRLL LG K++ NPFDWME ISLQGKTNFFE+RVGEYQ+
Sbjct: 241 VGMNADLMSEYIEFVADRLLVQLGVDKVWNTPNPFDWMESISLQGKTNFFERRVGEYQRN 300
Query: 309 SVMSSL-NGNGGNHVFKIDEDF 329
VM+ + + N F + DF
Sbjct: 301 GVMAKQEDASFQNFHFTTEVDF 322
>gi|74025552|ref|XP_829342.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834728|gb|EAN80230.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+YP IW+ YK+AE+S WT EE+DL D+ WE L E+HF+
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ D D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + KL +RV ++ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVLIEREFICDAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL +LGY + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|438946|gb|AAA60776.1| homolog of vaccinia virus CDS F4L (ribonucleotide reductase, small
chain); putative [Variola major virus]
gi|94484491|gb|ABF23604.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484688|gb|ABF23800.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484886|gb|ABF23997.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724274|gb|ABG43399.1| ribonucleotide reductase small subunit [Variola virus]
Length = 333
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF EVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S ++ ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSASYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YI+FVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYIKFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|313675915|ref|YP_004053911.1| ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
gi|312942613|gb|ADR21803.1| Ribonucleoside-diphosphate reductase [Marivirga tractuosa DSM 4126]
Length = 331
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/330 (67%), Positives = 265/330 (80%), Gaps = 3/330 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
+ + +EP+L N DRF +FPIQ+ IWE YK AEASFWTAEE+DLSQD + WE LT E
Sbjct: 4 VTTFQDEPILKENKDRFVLFPIQHKDIWEFYKMAEASFWTAEEIDLSQDQKDWENLTEGE 63
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
HF+ HVLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIA+EN+HSE YSLL++TY
Sbjct: 64 THFIKHVLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAMENVHSETYSLLIDTY 123
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
+KD+ EK++LF+AI+T+ CV KKA WAL WID +AERLIAFA VEGIFFSGSFC+IF
Sbjct: 124 VKDNKEKDKLFNAIDTMDCVKKKADWALRWIDEG-NYAERLIAFAAVEGIFFSGSFCSIF 182
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREF 239
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+ L KLS+E+V A++ +AVEIE+EF
Sbjct: 183 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYNDHLVNKLSKEKVTAIITDAVEIEKEF 242
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
V D+LP L+GMN +LM QYIEFVADRLL L K+YG +NPFD+ME+ISLQGKTNFFE
Sbjct: 243 VTDSLPVKLIGMNADLMCQYIEFVADRLLQELRCDKVYGSSNPFDFMEMISLQGKTNFFE 302
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
KRVG+YQKA VM + F +DEDF
Sbjct: 303 KRVGDYQKAGVMKK-EEDSDKAKFSLDEDF 331
>gi|323098445|gb|ADX22683.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFF ASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFXASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ ++ AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|397573555|gb|EJK48757.1| hypothetical protein THAOC_32419 [Thalassiosira oceanica]
Length = 480
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/327 (69%), Positives = 259/327 (79%), Gaps = 7/327 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQ--IWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+EPLL NP+RF +FPIQ + IW+MYKKAEASFWTAEE+DL++DL+ W+ LT +E+HF
Sbjct: 158 DEPLLMDNPNRFVLFPIQDNEVRIWQMYKKAEASFWTAEEIDLAEDLKDWDGLTNNERHF 217
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
V+H+LAFFAASDGIV ENL G F TEVQ AEAR FYGFQIA+ENIHSE YSLL++TYIKD
Sbjct: 218 VSHILAFFAASDGIVNENLCGNFATEVQSAEARCFYGFQIAVENIHSETYSLLIDTYIKD 277
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
+K L +AIETVPCV KKA WAL W D +FAER IAFA VEGIFFSGSFCAIFWL
Sbjct: 278 QADKMHLLNAIETVPCVQKKANWALKWCDSRHASFAERCIAFAAVEGIFFSGSFCAIFWL 337
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGL FSNELISRDEGLHCDFACLLYS L K+ E R+ +V AVEIE+EFV D
Sbjct: 338 KKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKVPESRIVEIVTHAVEIEKEFVVD 397
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEF ADRLL ALG K+Y +NPF+WME+ISLQGKTNFFEKRV
Sbjct: 398 ALPVELIGMNSGLMCQYIEFCADRLLHALGCSKIYKASNPFEWMEMISLQGKTNFFEKRV 457
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
GEY K+ V N VF +D DF
Sbjct: 458 GEYSKSGV----GVNKDEQVFSLDCDF 480
>gi|6969682|gb|AAF33894.1| TF4L [Vaccinia virus Tian Tan]
Length = 319
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 261/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGL CDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLRCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMETYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
+ VMS + NH F +D DF
Sbjct: 302 QMGVMSQED----NH-FSLDVDF 319
>gi|332247268|ref|XP_003272775.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Nomascus leucogenys]
Length = 434
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 110 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 169
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 170 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 229
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 230 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 289
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 290 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 349
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+GK++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 350 TEALPVKLIGMNCILMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 409
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 410 RVGEYQRMGVMSSPTENS----FTLDADF 434
>gi|75076796|sp|Q4R7Q7.1|RIR2_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|67969020|dbj|BAE00865.1| unnamed protein product [Macaca fascicularis]
Length = 389
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV +E+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>gi|345498175|ref|XP_003428168.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Nasonia vitripennis]
Length = 372
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/324 (69%), Positives = 260/324 (80%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQ+P IW MYKKAEASFWT EEVDLS+D+ W L +E+HF++H
Sbjct: 51 EPLLKENPGRFVLFPIQWPDIWHMYKKAEASFWTVEEVDLSKDMADWNRLNDNERHFISH 110
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIENIHSEMYSLL++TYI D+ +
Sbjct: 111 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENIHSEMYSLLIDTYISDASQ 170
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF+AIET+PCVAKKA WALNWI S TFAER+IAFA VEGIFFSGSF AIFWLKKR
Sbjct: 171 RQFLFNAIETLPCVAKKANWALNWISHDSATFAERVIAFAAVEGIFFSGSFAAIFWLKKR 230
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ + K SEERV +++K+AV IE+EF+ DALP
Sbjct: 231 GLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSEERVISIIKDAVTIEQEFLTDALP 290
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LM QYIEFVADRLLG LG K+Y NPFD+ME ISL+GKTNFFEK+VGEY
Sbjct: 291 VEMIGMNCRLMCQYIEFVADRLLGELGCPKVYNSENPFDFMEHISLEGKTNFFEKKVGEY 350
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM G N F ++ DF
Sbjct: 351 QKWGVMQDRTGTENN--FSLEADF 372
>gi|405977462|gb|EKC41913.1| Ribonucleoside-diphosphate reductase small chain [Crassostrea
gigas]
Length = 369
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 224/324 (69%), Positives = 262/324 (80%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL HWEAL +E+HF++H
Sbjct: 48 EPLLEDNPRRFVVFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLGHWEALKDEEQHFISH 107
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQ EAR FYGFQIA+ENIHSEMYSLL++TYIKD +
Sbjct: 108 VLAFFAASDGIVNENLVERFSKEVQATEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKQ 167
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AIET+PCV KKA WA+ WI D F ER++AFA VEGIFFSGSF AIFWLKKR
Sbjct: 168 RDYLFNAIETLPCVKKKADWAIKWIGDQEADFGERVVAFAAVEGIFFSGSFAAIFWLKKR 227
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
G+MPGLTFSNELISRDEGLHCDFACL++S L + S+ER+ ++ +AV+IE+EF+ +ALP
Sbjct: 228 GIMPGLTFSNELISRDEGLHCDFACLMFSHLLNRPSKERIYEIICDAVKIEQEFLTEALP 287
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN +LM QYIEFVADRLL L K+Y V NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 288 CNLIGMNCKLMKQYIEFVADRLLLELKCEKVYNVENPFDFMEHISLEGKTNFFEKRVGEY 347
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM+ N H F +D DF
Sbjct: 348 QKMGVMNG--NNSSKHEFTLDADF 369
>gi|241166485|ref|XP_002409876.1| ribonucleotide reductase, beta subunit, putative [Ixodes
scapularis]
gi|215494664|gb|EEC04305.1| ribonucleotide reductase, beta subunit, putative [Ixodes
scapularis]
Length = 376
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF MFPI Y IW MYKKAEASFWT EEVDL +DL HW+ L +E+HF++
Sbjct: 56 DEPLLRENPRRFVMFPIVYEDIWRMYKKAEASFWTVEEVDLGKDLPHWDGLKPEERHFIS 115
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIEN+HSEMYSLL++TYIKD
Sbjct: 116 HILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQMAIENVHSEMYSLLIDTYIKDPS 175
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++RLF+A+ET+PC+ +KA WALNWI S TF ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 176 ERDRLFNAVETMPCIKRKADWALNWISNRSATFGERIVAFAAVEGIFFSGSFASIFWLKK 235
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACL++S L K S+ RV+ ++ +AV IE+EF+ DAL
Sbjct: 236 RGLMPGLTFSNELISRDEGLHTDFACLMFSHLVNKPSQARVRQIICDAVVIEQEFLTDAL 295
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN ELM +YIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 296 PVALIGMNCELMKRYIEFVADRLLVELGCEKVYNSENPFDFMEHISLEGKTNFFEKRVGE 355
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM+ N VF +D DF
Sbjct: 356 YQKAGVMA----NKEEQVFTLDADF 376
>gi|224048725|ref|XP_002196356.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2
[Taeniopygia guttata]
Length = 390
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 263/329 (79%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HWE+L +EK
Sbjct: 66 PGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPEEK 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WA+ WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREFLFNAIETLPCVKKKADWAMCWIGDKKATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIHKPSEERVKEIIMNAVLIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K+Y NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIYKAENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N F +D +F
Sbjct: 366 RVGEYQRMGVMSKPTENS----FTLDAEF 390
>gi|290995765|ref|XP_002680453.1| predicted protein [Naegleria gruberi]
gi|284094074|gb|EFC47709.1| predicted protein [Naegleria gruberi]
Length = 338
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 217/318 (68%), Positives = 258/318 (81%), Gaps = 5/318 (1%)
Query: 13 NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFA 72
NP RF +FP+ YP++WEMYKK ASFWT EEVDL D+ WE L ++E+HF+ VLAFFA
Sbjct: 25 NPHRFVLFPLHYPKMWEMYKKTMASFWTVEEVDLHTDITEWEKLNSNEQHFIKTVLAFFA 84
Query: 73 ASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
ASDGIV ENL +FM +VQV EAR FYGFQIAIENIH+EMYS L+ET IKD E+NRLFH
Sbjct: 85 ASDGIVNENLCQQFMAQVQVPEARCFYGFQIAIENIHAEMYSTLIETLIKDQRERNRLFH 144
Query: 133 AIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLT 192
AI+TVP V KKA WAL WI+ FAERL+AFACVEGIFFSGSFC+IFWLKKRGLMPGL+
Sbjct: 145 AIDTVPSVQKKANWALKWINSENLFAERLLAFACVEGIFFSGSFCSIFWLKKRGLMPGLS 204
Query: 193 FSNELISRDEGLHCDFACLLYSLLR-TKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLH DFACLLYS L+ TKL ++ V +LV EAVEIE+EF+ ++LP L+GM
Sbjct: 205 FSNELISRDEGLHTDFACLLYSTLKYTKLPQQVVHSLVYEAVEIEKEFISESLPVDLIGM 264
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N LM QYIE VADRLL ++GY K+Y +NPFDWM +IS+ GKTNFFEK+VGEY KA++M
Sbjct: 265 NSRLMQQYIEMVADRLLVSIGYEKIYNSSNPFDWMNIISVSGKTNFFEKKVGEYAKANIM 324
Query: 312 SSLNGNGGNHVFKIDEDF 329
S N + VF++D+DF
Sbjct: 325 S----NKKDKVFRLDDDF 338
>gi|300676950|gb|ADK26821.1| ribonucleotide reductase M2 [Zonotrichia albicollis]
Length = 390
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 263/329 (79%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HWE+L +EK
Sbjct: 66 PGTEEEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPEEK 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WA+ WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSQEREFLFNAIETLPCVKKKADWAMCWIGDKKATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLIHKPSEERVREIIMNAVLIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K+Y NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIYKAENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N F +D +F
Sbjct: 366 RVGEYQRMGVMSKPTDNS----FTLDAEF 390
>gi|118087248|ref|XP_418364.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Gallus gallus]
Length = 353
Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 264/325 (81%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQ+P IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 33 EEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 92
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIKD +
Sbjct: 93 HVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 152
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+AIET+PCV KKA WAL WI+ E TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 153 KRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLKK 212
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L + SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 213 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVREIIVNAVEIEQEFLTEAL 272
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 273 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 332
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 333 YQRFAVMAETMDN----VFTLDADF 353
>gi|885759|gb|AAA69374.1| E4L [Variola virus]
gi|5830589|emb|CAB54628.1| E4L protein [Variola minor virus]
gi|94483674|gb|ABF22791.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484287|gb|ABF23401.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485692|gb|ABF24799.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486095|gb|ABF25200.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486298|gb|ABF25402.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486501|gb|ABF25604.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486703|gb|ABF25805.1| ribonucleotide reductase small subunit [Variola virus]
gi|94486906|gb|ABF26007.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487312|gb|ABF26411.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487921|gb|ABF27017.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489931|gb|ABF29017.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724476|gb|ABG43600.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635085|gb|ABU91534.1| ribonucleotide reductase small subunit [Variola virus]
Length = 319
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF EVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|323098642|gb|ADX22879.1| ribonucleotide reductase small subunit [Monkeypox virus]
Length = 319
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/323 (69%), Positives = 258/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFF ASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFXASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGXGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V+ ++ AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRFIITNAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|432100630|gb|ELK29158.1| Ribonucleoside-diphosphate reductase subunit M2, partial [Myotis
davidii]
Length = 331
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 264/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWE L ++E+
Sbjct: 7 PGAQEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWEVLKSEER 66
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 67 YFISHVLAFFAASDGIVNENLVERFRQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 126
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 127 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 186
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K +E+RVK ++ AV IE+EF+
Sbjct: 187 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPAEQRVKEIITNAVRIEQEFL 246
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM +YIEFVADRLL LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 247 TEALPVKLIGMNCTLMKRYIEFVADRLLLELGFSKVFRVENPFDFMENISLEGKTNFFEK 306
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 307 RVGEYQRMGVMSSPTENS----FTLDADF 331
>gi|297668213|ref|XP_002812343.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Pongo
abelii]
Length = 449
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 125 PDVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETLPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|397513395|ref|XP_003827001.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Pan
paniscus]
Length = 449
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 125 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|449284077|gb|EMC90658.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial [Columba
livia]
Length = 333
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 263/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 13 EEPLLRKNPRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 72
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIKD +
Sbjct: 73 HILAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 132
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+AIET+PCV KKA WAL WI+ E TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 133 KRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLKK 192
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L + SEERV ++ AVEIE+EF+ +AL
Sbjct: 193 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVHEIIVNAVEIEQEFLTEAL 252
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 253 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 312
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 313 YQRFAVMAETMDN----VFTLDADF 333
>gi|410928205|ref|XP_003977491.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Takifugu rubripes]
Length = 386
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 261/324 (80%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWE+L +E++F++H
Sbjct: 67 EPLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKDEERYFISH 126
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E
Sbjct: 127 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPSE 186
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF+AIET+PCV +KA WALNWI + S + ER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 187 REYLFNAIETLPCVKRKADWALNWIGNKSAAYGERVVAFAAVEGIFFSGSFASIFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L K S + V ++K AVEIE+EF+ +ALP
Sbjct: 247 GLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSAQTVSDIIKNAVEIEQEFLTEALP 306
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL+ LG+ K+Y NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 307 VKLIGMNCGLMKQYIEFVADRLMLELGFTKIYRAENPFDFMENISLEGKTNFFEKRVGEY 366
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
Q+ VMS N F++D DF
Sbjct: 367 QRMGVMSGATDN----TFRLDADF 386
>gi|410928203|ref|XP_003977490.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Takifugu rubripes]
Length = 388
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 261/324 (80%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWE+L +E++F++H
Sbjct: 69 EPLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKDEERYFISH 128
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E
Sbjct: 129 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPSE 188
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF+AIET+PCV +KA WALNWI + S + ER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 189 REYLFNAIETLPCVKRKADWALNWIGNKSAAYGERVVAFAAVEGIFFSGSFASIFWLKKR 248
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L K S + V ++K AVEIE+EF+ +ALP
Sbjct: 249 GLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSAQTVSDIIKNAVEIEQEFLTEALP 308
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL+ LG+ K+Y NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 309 VKLIGMNCGLMKQYIEFVADRLMLELGFTKIYRAENPFDFMENISLEGKTNFFEKRVGEY 368
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
Q+ VMS N F++D DF
Sbjct: 369 QRMGVMSGATDN----TFRLDADF 388
>gi|410250512|gb|JAA13223.1| ribonucleotide reductase M2 [Pan troglodytes]
gi|410250514|gb|JAA13224.1| ribonucleotide reductase M2 [Pan troglodytes]
Length = 449
Score = 462 bits (1188), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 125 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|260064013|ref|NP_001159403.1| ribonucleoside-diphosphate reductase subunit M2 isoform 1 [Homo
sapiens]
Length = 449
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 125 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|119621373|gb|EAX00968.1| hCG23833, isoform CRA_b [Homo sapiens]
gi|119621374|gb|EAX00969.1| hCG23833, isoform CRA_b [Homo sapiens]
Length = 449
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 125 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 184
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 185 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 244
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 245 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 304
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 305 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 364
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 365 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 424
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 425 RVGEYQRMGVMSSPTENS----FTLDADF 449
>gi|261335316|emb|CBH18310.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei gambiense DAL972]
Length = 337
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 254/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+YP IW+ YKKAE+S WT E + L D+ WE L E+HF+
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKKAESSIWTVENIYLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ D D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + KL +RV ++ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL +LGY + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|256081213|ref|XP_002576867.1| ribonucleoside-diphosphate reductase small chain [Schistosoma
mansoni]
gi|238662153|emb|CAZ33104.1| ribonucleoside-diphosphate reductase small chain, putative
[Schistosoma mansoni]
Length = 365
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 262/324 (80%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL PNP RF +FPI+Y +W YKKA ASFWT EEVDLS+D HWE+L E+HF+++
Sbjct: 43 EPLLKPNPHRFVLFPIEYHDVWHFYKKAVASFWTVEEVDLSKDFIHWESLKVGERHFISY 102
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENL RF EVQ+ E R FYG QIAIENIHSEMYSLL++TYIKDS E
Sbjct: 103 VLAFFAASDGIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDSKE 162
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AI + CVAKKA WAL+WI D TFAERL+AFA VEG+FFSGSF AIFWLKKR
Sbjct: 163 RDFLFNAISNLTCVAKKAQWALDWIGDSKSTFAERLVAFAAVEGVFFSGSFAAIFWLKKR 222
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL+FSNELISRDEGLHCDFACLL+ + K +ERV+++++EAV IE+EF+ +ALP
Sbjct: 223 GLMPGLSFSNELISRDEGLHCDFACLLFKHIIKKPPKERVESIIREAVLIEQEFLSEALP 282
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN +LM QYIEF+ADRLL LGY K+Y NPFD+ME IS++GKTNFFEKRVGEY
Sbjct: 283 VSLIGMNCKLMCQYIEFIADRLLVELGYEKMYHSDNPFDFMENISIEGKTNFFEKRVGEY 342
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
Q+A VMS G H F +DEDF
Sbjct: 343 QRAGVMSRARGE-STHNFSVDEDF 365
>gi|375148687|ref|YP_005011128.1| ribonucleoside-diphosphate reductase [Niastella koreensis GR20-10]
gi|361062733|gb|AEW01725.1| Ribonucleoside-diphosphate reductase [Niastella koreensis GR20-10]
Length = 323
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/323 (67%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N DRF + PI+YP IWEMYKK EASFWTAEE+DLS DL+ W +L E+HF++H
Sbjct: 6 EVLLQENKDRFVILPIKYPTIWEMYKKHEASFWTAEEIDLSGDLKDWASLNDGERHFISH 65
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA FM+EVQ+ EAR FYGFQI +ENIHSE Y+LL++TY+KD +E
Sbjct: 66 VLAFFAASDGIVNENLAVNFMSEVQLPEARCFYGFQIMMENIHSETYALLIDTYVKDVNE 125
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+RLFHAI+TVP V KKA WAL WI+ FAERL+AFA VEGIFFSGSFC+IFW+KKRG
Sbjct: 126 KDRLFHAIDTVPAVKKKAEWALRWIEQG-NFAERLVAFAAVEGIFFSGSFCSIFWMKKRG 184
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHC+FACLLYS+L KL++E+V ++ +AV IE+EF+ +ALP
Sbjct: 185 LMPGLTFSNELISRDEGLHCEFACLLYSMLNAKLTQEQVFNIIGDAVRIEKEFITEALPV 244
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYIEFVADR L LGY K++ NPFD+ME+ISLQGKTNFFEKRVG+Y+
Sbjct: 245 DLIGMNARLMQQYIEFVADRWLSELGYPKMFNATNPFDFMEMISLQGKTNFFEKRVGDYR 304
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA V N + + F +DEDF
Sbjct: 305 KAGV----NASKESQQFSLDEDF 323
>gi|410034790|ref|XP_003949799.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 [Pan troglodytes]
Length = 456
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 132 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 191
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 192 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 251
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 252 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 311
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 312 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 371
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 372 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 431
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 432 RVGEYQRMGVMSSPTENS----FTLDADF 456
>gi|885717|gb|AAA69333.1| C8L [Variola virus]
gi|885826|gb|AAA69439.1| C8L [Variola virus]
gi|94483878|gb|ABF22994.1| ribonucleotide reductase small subunit [Variola virus]
gi|94484081|gb|ABF23196.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485084|gb|ABF24194.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485286|gb|ABF24395.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485489|gb|ABF24597.1| ribonucleotide reductase small subunit [Variola virus]
gi|94485894|gb|ABF25000.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487109|gb|ABF26209.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487515|gb|ABF26613.1| ribonucleotide reductase small subunit [Variola virus]
gi|94487716|gb|ABF26813.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488123|gb|ABF27218.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488323|gb|ABF27417.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488523|gb|ABF27616.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488724|gb|ABF27816.1| ribonucleotide reductase small subunit [Variola virus]
gi|94488925|gb|ABF28016.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489125|gb|ABF28215.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489324|gb|ABF28413.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489527|gb|ABF28615.1| ribonucleotide reductase small subunit [Variola virus]
gi|94489726|gb|ABF28813.1| ribonucleotide reductase small subunit [Variola virus]
gi|94490135|gb|ABF29220.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724070|gb|ABG43196.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724681|gb|ABG43804.1| ribonucleotide reductase small subunit [Variola virus]
gi|109724885|gb|ABG44007.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725088|gb|ABG44209.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725293|gb|ABG44413.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725496|gb|ABG44615.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725700|gb|ABG44818.1| ribonucleotide reductase small subunit [Variola virus]
gi|109725903|gb|ABG45020.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726107|gb|ABG45223.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726310|gb|ABG45425.1| ribonucleotide reductase small subunit [Variola virus]
gi|109726513|gb|ABG45627.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635013|gb|ABU91466.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635031|gb|ABU91483.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635049|gb|ABU91500.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635067|gb|ABU91517.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635103|gb|ABU91551.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635121|gb|ABU91568.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635139|gb|ABU91585.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635158|gb|ABU91603.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635176|gb|ABU91620.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635194|gb|ABU91637.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635212|gb|ABU91654.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635230|gb|ABU91671.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635248|gb|ABU91688.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635266|gb|ABU91705.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635284|gb|ABU91722.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635320|gb|ABU91756.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635338|gb|ABU91773.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635356|gb|ABU91790.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635374|gb|ABU91807.1| ribonucleotide reductase small subunit [Variola virus]
gi|156635392|gb|ABU91824.1| ribonucleotide reductase small subunit [Variola virus]
gi|157739431|gb|ABU91739.1| ribonucleotide reductase small subunit [Variola virus]
Length = 319
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 260/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF EVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YI+FVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIKFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|158286793|ref|XP_308927.4| AGAP006818-PA [Anopheles gambiae str. PEST]
gi|157020637|gb|EAA04227.4| AGAP006818-PA [Anopheles gambiae str. PEST]
Length = 400
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 264/329 (80%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EPLL NP RF +FPIQYP IW+MYKKAEASFWT EEVDLS+D++ WE L E+
Sbjct: 78 PSI--EPLLRDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWETLKPSER 135
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 136 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 195
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
+DS E+ LF+AIET+PCV +KA WALNWI + F ER++AFA VEGIFFSGSF AIF
Sbjct: 196 RDSKEREFLFNAIETLPCVKRKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFAAIF 255
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K S+ERV ++++AV IE+EF+
Sbjct: 256 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKYLVQKPSKERVTEIIRDAVLIEQEFL 315
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
ALP ++GMN +LMSQYIEFVADRLL LG K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 316 TKALPVDMLGMNCDLMSQYIEFVADRLLLELGCEKIYHTKNPFSFMEFISLEGKTNFFEK 375
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 376 KVGEYQKWGVMA----NRLDNVFTLDADF 400
>gi|325953830|ref|YP_004237490.1| ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
gi|323436448|gb|ADX66912.1| Ribonucleoside-diphosphate reductase [Weeksella virosa DSM 16922]
Length = 323
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 227/325 (69%), Positives = 263/325 (80%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N +RF +FPIQ+ IW+ YKKAEASFWTAEEVDLS D+ W+ L DE++F++
Sbjct: 3 EPILQNNKNRFVIFPIQHDDIWQFYKKAEASFWTAEEVDLSSDMNDWQNKLNKDERYFIS 62
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA F+ EVQ EAR FYGFQI IENIHSEMYSLL++TYIKD
Sbjct: 63 HVLAFFAASDGIVNENLAVNFVQEVQYPEARFFYGFQIMIENIHSEMYSLLIDTYIKDPK 122
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ L AIET+PCV KKA WAL WI+ S+ FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 123 EKDHLLRAIETIPCVGKKADWALEWIE-SDNFAERLIAFAAVEGIFFSGSFCSIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY + L+ KL EE V+ ++ +AVE+E+EFV +AL
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLLYVNHLKNKLPEETVQKIIADAVEVEKEFVTEAL 241
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM QYIEFVADRLL ALG K++ NPFD+MELISLQGKTNFFE+RVGE
Sbjct: 242 PVRLIGMNAELMCQYIEFVADRLLDALGCKKVWNATNPFDFMELISLQGKTNFFERRVGE 301
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ V G N+ F +DEDF
Sbjct: 302 YQKSGVAQ---GEKQNYSFSLDEDF 323
>gi|126322530|ref|XP_001380256.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Monodelphis domestica]
Length = 361
Score = 460 bits (1184), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 41 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 100
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSEMYSLL++TYIKD
Sbjct: 101 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENIHSEMYSLLIDTYIKDPQ 160
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+PCV +KA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 161 KREFLFNAIETMPCVKRKADWALQWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 220
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK ++ AVEIE+EF+ DAL
Sbjct: 221 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNKPSEERVKEIIINAVEIEQEFLTDAL 280
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+G+N LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 281 PVGLIGINSTLMKQYIEFVADRLLVELGFSKVFQSDNPFDFMENISLEGKTNFFEKRVSE 340
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 341 YQRFAVMAETTDN----VFTLDADF 361
>gi|392568085|gb|EIW61259.1| ribonucleotide reductase small subunit [Trametes versicolor
FP-101664 SS1]
Length = 410
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/334 (67%), Positives = 263/334 (78%), Gaps = 8/334 (2%)
Query: 4 IPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
+PE EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+D+ W LT DE
Sbjct: 77 LPEHMEPLLIESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDMHDWNNRLTNDE 136
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HFV+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 137 RHFVSHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 196
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAI 179
IKD E+ RLF AI+T+PC+ KKA WAL WI E+ F+ERLIAFA VEGIFFSGSF +I
Sbjct: 197 IKDPQERERLFDAIDTIPCIKKKADWALRWISDKESAFSERLIAFAAVEGIFFSGSFASI 256
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + + V A++KEAVEIE+EF
Sbjct: 257 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDIVLAIIKEAVEIEQEF 316
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG K Y V NPFD+M++ISLQGKTNFFE
Sbjct: 317 LTDALPCALIGMNATLMRQYIEFVADRLLVALGGEKFYNVTNPFDFMDMISLQGKTNFFE 376
Query: 300 KRVGEYQKASVMSSLNGN----GGNHVFKIDEDF 329
KRV +Y KA V +S + F +DEDF
Sbjct: 377 KRVSDYSKAGVSTSAQSTTSEVNTSKNFSVDEDF 410
>gi|443728153|gb|ELU14627.1| hypothetical protein CAPTEDRAFT_162025 [Capitella teleta]
Length = 321
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/324 (69%), Positives = 266/324 (82%), Gaps = 6/324 (1%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
+L NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+D+ HWE L DE+HF++HVL
Sbjct: 1 MLRDNPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDVSHWEQLKPDERHFISHVL 60
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFAASDGIV ENL RF EVQV EAR FYGFQIAIENIHSEMYSLL++TYIKD EK
Sbjct: 61 AFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAIENIHSEMYSLLIDTYIKDMTEKE 120
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
LF+AIET+PCV +KA WAL WI+ S++ +AER++AFA VEGIFFSGSF AIFWLKKRG+
Sbjct: 121 YLFNAIETMPCVKEKADWALRWINDSQSSYAERVVAFAAVEGIFFSGSFAAIFWLKKRGV 180
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEGLHCDFACL++S L K S+E++ ++++AV IE++F+ +ALPC
Sbjct: 181 MPGLTFSNELISRDEGLHCDFACLMFSHLVHKPSQEKIYIIIRDAVRIEQKFLTEALPCN 240
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN +LM QYIEFVADRLL LG K++ V NPFD+M+ ISL+GKTNFFEKRVGEYQK
Sbjct: 241 LIGMNCDLMKQYIEFVADRLLVELGCEKIWNVENPFDFMDNISLEGKTNFFEKRVGEYQK 300
Query: 308 ASVMSSLNG--NGGNHVFKIDEDF 329
M LNG + H F +DEDF
Sbjct: 301 ---MGLLNGASSSNAHQFTVDEDF 321
>gi|145580571|pdb|2UW2|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit R2
Length = 332
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 264/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 8 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 67
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 68 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 127
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 128 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 187
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRG MPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 188 WLKKRGPMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 247
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 248 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 307
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 308 RVGEYQRMGVMSSPTENS----FTLDADF 332
>gi|449495040|ref|XP_002198998.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Taeniopygia guttata]
Length = 346
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 224/327 (68%), Positives = 263/327 (80%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ EEPLL N RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F
Sbjct: 24 LDEEPLLRKNHRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYF 83
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIKD
Sbjct: 84 ISHVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKD 143
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
+++ LF+AIET+PCV KKA WAL WI+ E TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 144 PKKRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWL 203
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L + SEERV ++ AVEIE+EF+ +
Sbjct: 204 KKRGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVCEIIVNAVEIEQEFLTE 263
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEFVADRLL LG+ K++ V NPFD+ME ISL+GKTNFFEKRV
Sbjct: 264 ALPVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFNVENPFDFMENISLEGKTNFFEKRV 323
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQ+ +VM+ N VF +D DF
Sbjct: 324 SEYQRFAVMAETMDN----VFTLDADF 346
>gi|355751100|gb|EHH55355.1| hypothetical protein EGM_04551, partial [Macaca fascicularis]
Length = 366
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 264/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 42 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 101
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 102 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 161
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 162 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 221
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL+++ L K EERV+ + AV IE+EF+
Sbjct: 222 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFNHLVHKPLEERVRERIINAVRIEQEFL 281
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 282 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 341
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 342 RVGEYQRMGVMSSPTENS----FTLDADF 366
>gi|74025548|ref|XP_829340.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834726|gb|EAN80228.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 254/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+YP IW+ YK+AE+S WT EE+DL D+ WE L E+HF+
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIH E YS+L++TY+ D D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHCETYSVLIDTYVVDPD 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + KL +RV ++ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL +LGY + NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHCNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|281200507|gb|EFA74725.1| ribonucleotide reductase small subunit [Polysphondylium pallidum
PN500]
Length = 335
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/336 (65%), Positives = 265/336 (78%), Gaps = 8/336 (2%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
M +I EEP+L N DRF +FPI+Y IW+MYKKAEASFWTAEE+DL+ D+ WE L +
Sbjct: 1 MQTIIEEPILKENKDRFVLFPIKYADIWQMYKKAEASFWTAEEIDLAGDIGDWENKLNDN 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+T+VLAFFAASDGIV ENLA +FM+EVQ+ EAR FYGFQIAIENIHSE YSLL++T
Sbjct: 61 ERHFITNVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKDS+ K +FHAI+T+P V KKA WAL WI S++FAERL+AFA VEGIFFSGSFC+I
Sbjct: 121 YIKDSETKRNIFHAIDTIPAVKKKADWALRWISNSKSFAERLVAFAAVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLHCDFACLLY L+ KL ++ ++++AV E+EF
Sbjct: 181 FWLKKRGLMHGLTFSNELISRDEGLHCDFACLLYQKLQNKLDNNTIETIIRDAVACEKEF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ ++LP L+GMN MSQYIEF ADRLL +LGY K+Y +NPFDWME+ISLQ KTNFFE
Sbjct: 241 ITESLPVDLIGMNSRSMSQYIEFCADRLLLSLGYKKIYNSSNPFDWMEMISLQRKTNFFE 300
Query: 300 KRVGEYQKASVM------SSLNGNGGNHVFKIDEDF 329
+V EYQK+ V +S N N F +DEDF
Sbjct: 301 GKVSEYQKSGVAKQGQPSTSANPN-QQRKFVLDEDF 335
>gi|328872436|gb|EGG20803.1| ribonucleotide reductase small subunit [Dictyostelium fasciculatum]
Length = 335
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/311 (69%), Positives = 255/311 (81%), Gaps = 1/311 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
M +I EEPLL N DRF +FPI+Y IW MYKKAEASFWTAEE+DL+ D+ WE L +
Sbjct: 1 MQAIMEEPLLKENKDRFVLFPIKYTDIWNMYKKAEASFWTAEEIDLASDVNEWENKLNDN 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+ +VLAFFAASDGIV ENLA +FM+EVQ+ EAR FYGFQIAIENIHSE YSLL++T
Sbjct: 61 ERHFIKNVLAFFAASDGIVNENLATKFMSEVQIPEARCFYGFQIAIENIHSETYSLLIDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIK+ DEK LF+AIET+PCV KKA WAL WI S++FAERL+AFA VEGIFFSGSFC+I
Sbjct: 121 YIKNPDEKKVLFNAIETIPCVKKKADWALRWITNSKSFAERLVAFAAVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+ L KL + +++++++AVE E+EF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYNKLNNKLDVKTIESIIRDAVECEKEF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
V D+LP L+GMN MS+YIEF ADRLL +LGY K+Y ANPFDWME+ISL K NFFE
Sbjct: 241 VTDSLPVDLIGMNSREMSKYIEFCADRLLVSLGYKKIYNSANPFDWMEMISLMRKANFFE 300
Query: 300 KRVGEYQKASV 310
+V EY KA V
Sbjct: 301 GKVSEYAKAGV 311
>gi|301117384|ref|XP_002906420.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
gi|262107769|gb|EEY65821.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
Length = 379
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/327 (68%), Positives = 257/327 (78%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
IP EP L NP+RF +FPIQ ++W+MYKKAEASFWTAEE+DL DL+ W LT +E+HF
Sbjct: 57 IPIEPFLVENPNRFVLFPIQEHEVWQMYKKAEASFWTAEELDLVHDLKDWSKLTDNERHF 116
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ HVLAFFAASDGIV ENLA F EVQV EAR FYGFQIAIENIHSE+YSLL++TYIKD
Sbjct: 117 IKHVLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHSEVYSLLIDTYIKD 176
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ EK+ L AIET+PCV KKA WA+ W D ++ ERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 177 AIEKDHLLRAIETIPCVTKKAHWAIKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWL 236
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGL+FSNELISRDEG+H DFACLLYS L TKL E RV +V++AV IE EFV D
Sbjct: 237 KKRGLMPGLSFSNELISRDEGMHTDFACLLYSKLVTKLPESRVHEIVRDAVTIEHEFVRD 296
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
+LP L+GMN LM QYIEFVADRLL +LG K+Y NPFDWM++ISLQGKTNFFEKRV
Sbjct: 297 SLPVELIGMNSGLMCQYIEFVADRLLYSLGVSKIYHAKNPFDWMDMISLQGKTNFFEKRV 356
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
GEY KA V + VF +D DF
Sbjct: 357 GEYSKAGVGVA----AEEQVFTLDADF 379
>gi|189501948|ref|YP_001957665.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497389|gb|ACE05936.1| hypothetical protein Aasi_0535 [Candidatus Amoebophilus asiaticus
5a2]
Length = 355
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 263/329 (79%), Gaps = 3/329 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P+ EP+L N +RF +FPI++ IWE YKKAEASFWTAEE+DL QDL+ W L E+
Sbjct: 29 PTSTLEPILQENKNRFVLFPIEHHDIWEFYKKAEASFWTAEEIDLGQDLKDWANLNDGER 88
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIA+ENIHSE YSLL++TYI
Sbjct: 89 HFISHVLAFFAASDGIVNENLAENFVAEVQYTEAKFFYGFQIAVENIHSETYSLLIDTYI 148
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
KD E+++LF+AI+T+ CV KKA WAL WI+ + +FAERL+AFA VEGIFFSGSFC+IFW
Sbjct: 149 KDPQERDKLFNAIDTLDCVKKKADWALRWIEQA-SFAERLVAFAAVEGIFFSGSFCSIFW 207
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFV 240
LKKRGLMPGL+FSNELISRDEGLHCDFACLLY+ L+ KL EERV+ ++ +AV IE+EFV
Sbjct: 208 LKKRGLMPGLSFSNELISRDEGLHCDFACLLYANHLQNKLPEERVREIITDAVAIEKEFV 267
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN +LMSQYIEFVADRLL LG K+Y NPFD+ME+ISLQGKTNFFEK
Sbjct: 268 TDALPVKLIGMNADLMSQYIEFVADRLLLELGCSKVYNATNPFDFMEMISLQGKTNFFEK 327
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKA VM F +D DF
Sbjct: 328 RVGEYQKAGVMKK-EEEKTTERFSLDIDF 355
>gi|297209|emb|CAA48969.1| C8L [Variola virus]
gi|745144|prf||2015436AF C8L gene
Length = 333
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF EVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M Y+EFVADRL+ LG+ ++Y V NP D+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|348675019|gb|EGZ14837.1| hypothetical protein PHYSODRAFT_346505 [Phytophthora sojae]
Length = 386
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/324 (68%), Positives = 254/324 (78%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP L NP+RF +FPIQ +W+MYKKAEASFWTAEE+DL DL W+ LT +E+ F+ H
Sbjct: 67 EPYLVSNPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLNDWQKLTDNERFFIKH 126
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F EVQV EAR FYGFQIAIENIH+E+YSLL++TYIKD+ E
Sbjct: 127 VLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHAEVYSLLIDTYIKDTME 186
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN L AIET+PCV KKA WAL W D ++ ERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 187 KNHLLRAIETIPCVKKKAHWALKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL+FSNELISRDEG+H DFACL+YS L KL E RV +V+EAV IE EFVCD+LP
Sbjct: 247 GLMPGLSFSNELISRDEGMHTDFACLMYSKLVNKLPESRVHEIVREAVTIEHEFVCDSLP 306
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL +LG KLY V NPFDWM++ISLQGKTNFFEKRVGEY
Sbjct: 307 VELIGMNSTLMCQYIEFVADRLLYSLGVPKLYNVKNPFDWMDMISLQGKTNFFEKRVGEY 366
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
KA V + VF +D DF
Sbjct: 367 SKAGVGVA----AEEQVFTLDADF 386
>gi|46446983|ref|YP_008348.1| ribonucleoside-diphosphate reductase small chain [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400624|emb|CAF24073.1| probable ribonucleoside-diphosphate reductase small chain
[Candidatus Protochlamydia amoebophila UWE25]
Length = 323
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/324 (68%), Positives = 260/324 (80%), Gaps = 6/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI + +IW+MYKKAEASFWTAEE+DL+ DL W+ L DEK+F+
Sbjct: 5 EPILRENKDRFVLFPINHAEIWQMYKKAEASFWTAEEIDLTSDLLDWDRKLNNDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA FM+EVQ EAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 65 HILAFFAASDGIVNENLAVNFMSEVQYPEARCFYGFQIMMENIHSEAYSLLIDTYIKDPT 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+KNRLF A+ET+PC++ KA WAL WI +F+ERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 DKNRLFKALETIPCISNKADWALRWISQG-SFSERLVAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL+F+NELISRDEGLHCDFACLLYS L KL E ++A++ AV IE+EFV DALP
Sbjct: 184 GLMPGLSFANELISRDEGLHCDFACLLYSQLNNKLPLETLQAIISHAVAIEKEFVQDALP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL ALG KLY V NPFD+M+LIS+ GKTNFFE+RV EY
Sbjct: 244 VRLIGMNATLMCQYIEFVADRLLVALGSPKLYNVDNPFDFMDLISMPGKTNFFERRVSEY 303
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK+ VMS+ NHVF I EDF
Sbjct: 304 QKSGVMST----KENHVFTIHEDF 323
>gi|255037048|ref|YP_003087669.1| ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
18053]
gi|254949804|gb|ACT94504.1| Ribonucleoside-diphosphate reductase [Dyadobacter fermentans DSM
18053]
Length = 331
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 264/325 (81%), Gaps = 2/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL +P RF +FPI++ IWEMYK+ EASFWTAEE+DLSQD++ WE L+ E+HF++
Sbjct: 8 QEPLLTEDPLRFVLFPIKHSDIWEMYKRHEASFWTAEEIDLSQDMKDWENLSDGERHFIS 67
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA F++EVQ AEA+ FYGFQIA+ENIHSE YSLL++TYIKDS
Sbjct: 68 HVLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQIAMENIHSETYSLLIDTYIKDSA 127
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RL AIET+PCV KKA WAL WID S FAER+IAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 128 EKDRLLRAIETIPCVQKKADWALKWID-SPVFAERIIAFAAVEGIFFSGSFCSIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGL+FSNELISRDEGLHC+FACLLY+ + +L +ERV ++ +AVEIE+EFV +AL
Sbjct: 187 GLMPGLSFSNELISRDEGLHCEFACLLYTKHILNQLPQERVIEIMLDAVEIEKEFVSEAL 246
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM QYIE++AD L LG K +G ANPFD+MELISL GKTNFFEKRVGE
Sbjct: 247 PVSLIGMNADLMKQYIEYIADFWLERLGCPKQFGSANPFDFMELISLPGKTNFFEKRVGE 306
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS + H D DF
Sbjct: 307 YQKAGVMSGVKDKESAHKISFDSDF 331
>gi|441498220|ref|ZP_20980420.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Fulvivirga imtechensis AK7]
gi|441438008|gb|ELR71352.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Fulvivirga imtechensis AK7]
Length = 331
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/324 (67%), Positives = 265/324 (81%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N +RF +FPI++ IW+ YKKAEASFWTAEE+DLSQDL+ W ++ E+HF++H
Sbjct: 10 EPILKENKNRFVLFPIKHDDIWQFYKKAEASFWTAEEIDLSQDLKDWNNMSDGERHFISH 69
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIAIENIHSE YSLL++TY+KD +E
Sbjct: 70 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAIENIHSETYSLLIDTYVKDPNE 129
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K++LF+AIET+ CV KKA WAL WID +F ERL+AFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 130 KDKLFNAIETMDCVKKKADWALRWIDEG-SFQERLVAFAAVEGIFFSGSFCSIFWLKKRG 188
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGL+FSNELISRDEGLHCDFACLLY + + KL +E + +++K+AV IE+EFV DALP
Sbjct: 189 LMPGLSFSNELISRDEGLHCDFACLLYNNHVINKLPQETIISIIKDAVSIEKEFVTDALP 248
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN +LM QYIEFVADRLL L K+YG NPFD+ME+ISLQGKTNFFEKRVG+Y
Sbjct: 249 VSLIGMNADLMCQYIEFVADRLLNELIGEKVYGATNPFDFMEMISLQGKTNFFEKRVGDY 308
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM S N + F +DEDF
Sbjct: 309 QKAGVMKS-NKEDDSPKFSLDEDF 331
>gi|149721713|ref|XP_001493623.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Equus caballus]
Length = 351
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW LT+DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLTSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALQWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVDLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ +HVF +D DF
Sbjct: 331 YQRFAVMAETT----DHVFTLDADF 351
>gi|326917964|ref|XP_003205263.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Meleagris gallopavo]
Length = 353
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 262/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQ+P IW+MYK+A+ASFWTAEEVDLS+DL HW L DEK+F++
Sbjct: 33 EEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPDEKYFIS 92
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIKD +
Sbjct: 93 HILAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 152
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+AIET+PCV KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 153 KRDFLFNAIETMPCVKKKADWALKWIEDRHSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 212
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L + SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 213 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVREIIVNAVEIEQEFLTEAL 272
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 273 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 332
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 333 YQRFAVMAETMDN----VFTLDADF 353
>gi|449017028|dbj|BAM80430.1| ribonucleoside-diphosphate reductase beta chain [Cyanidioschyzon
merolae strain 10D]
Length = 484
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/323 (67%), Positives = 260/323 (80%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL + +RF +FPI+YP+ W YK+A ASFWT EEVDL QDLR W LT+ EKHF+T+
Sbjct: 162 EPLLMASTNRFVLFPIRYPETWSFYKRAVASFWTVEEVDLQQDLRDWSRLTSGEKHFITY 221
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ++EAR+FY FQ+A+ENIHSEMYSLL++T+IK++ E
Sbjct: 222 VLAFFAASDGIVNENLALRFSTEVQLSEARSFYMFQMAMENIHSEMYSLLIDTFIKETTE 281
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+RLF AI+T+PCV +KA WAL W+ +FAERLIAFA VEGIFFSGSFCAIFWLKKRG
Sbjct: 282 KDRLFRAIDTLPCVRRKAEWALRWVGSDASFAERLIAFAAVEGIFFSGSFCAIFWLKKRG 341
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFAC ++ +LR K + ++A++ +AVE ER FV +ALP
Sbjct: 342 LMPGLTFSNELISRDEGLHCDFACHVFHMLRYKPPDVLIRAIICDAVEQERAFVREALPV 401
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYIEF ADRLL AL +Y V NPFDWMELISL GKTNFFE+RVGEYQ
Sbjct: 402 NLIGMNSTLMQQYIEFCADRLLVALHVDPVYRVENPFDWMELISLNGKTNFFERRVGEYQ 461
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA VM+ G + F++D DF
Sbjct: 462 KAGVMTFQPSGVGENDFRLDLDF 484
>gi|18640273|ref|NP_570429.1| CMLV039 [Camelpox virus]
gi|18482949|gb|AAL73746.1|AF438165_36 ribonucleotide reductase small subunit [Camelpox virus M-96]
gi|19717972|gb|AAG37497.1| CMP39L [Camelpox virus CMS]
Length = 319
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/323 (69%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA N +RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT +EK+F+ H
Sbjct: 2 EPILAKNQNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPNEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V +++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVISIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVINPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|395512223|ref|XP_003760342.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Sarcophilus harrisii]
Length = 351
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIHSEMYSLL++TYIKD
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQIPEARCFYGFQILIENIHSEMYSLLIDTYIKDPQ 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+PCV +KA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPCVKRKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK ++ AVEIE+EF+ DAL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNKPSEERVKEIIIHAVEIEQEFLTDAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+G+N LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGINCTLMKQYIEFVADRLLVELGFSKIFHSDNPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|346322004|gb|EGX91603.1| ribonucleoside-diphosphate reductase M2 subunit [Cordyceps
militaris CM01]
Length = 413
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/341 (65%), Positives = 266/341 (78%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L ADE
Sbjct: 75 PEQMDEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNADE 134
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 135 QYFISHILAFFAASDGIVNENLIERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 194
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AIET+PC+ KKA WAL+WI D TFA+RL+AFA +EGIFFSG+F +I
Sbjct: 195 IKEQAQRTYLFNAIETIPCIRKKADWALHWISDKQSTFAQRLVAFAAIEGIFFSGAFASI 254
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S+E +K ++ +AV IE+EF
Sbjct: 255 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLNNRASKEIIKTIITDAVAIEKEF 314
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 315 LTEALPCALLGMNATLMQQYIEFVADRLLAALGNEKVYKSTNPFDFMENISLGGKTNFFE 374
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKIDEDF 329
KRVGEYQKA VM+S N GG+ F D+DF
Sbjct: 375 KRVGEYQKAGVMASASKKADDGTVEENQAGGD--FSFDDDF 413
>gi|395818124|ref|XP_003782487.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Otolemur garnettii]
Length = 351
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKCFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 EREFLFNAIETMPCVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ EAV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFRYLVNKPSEERVREIIIEAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISLQGKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLQGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMTETTDN----VFTLDADF 351
>gi|358333482|dbj|GAA27391.2| ribonucleoside-diphosphate reductase subunit M2 [Clonorchis
sinensis]
Length = 492
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 261/329 (79%), Gaps = 2/329 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + EPLL PNP RF +FPIQY +W+ YKKA ASFWT EEVDLS+D W +L E+
Sbjct: 165 PELELEPLLKPNPHRFVLFPIQYHDVWQFYKKAVASFWTVEEVDLSKDFSDWNSLKVGER 224
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF+++VLAFFAASDGIVLENL RF EVQV E R FYG QIAIENIHSEMYSLL++TYI
Sbjct: 225 HFISYVLAFFAASDGIVLENLVERFSQEVQVPEVRCFYGMQIAIENIHSEMYSLLIDTYI 284
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E++ LF+AI + CVA+KA WALNWI D TFAER++AFA VEGIFFSGSF AIF
Sbjct: 285 KDPTERDFLFNAISNLECVAQKAQWALNWIGDTHSTFAERIVAFAAVEGIFFSGSFAAIF 344
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLY + K +++RV A++KEAVEIE++F+
Sbjct: 345 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKYIVQKPAKDRVLAIIKEAVEIEQKFL 404
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP +L+GMN +LM +YIEF+ADRLL LG+ K YG NPFD+ME ISL+GKTNFFEK
Sbjct: 405 SDALPVSLIGMNCKLMCRYIEFIADRLLVELGHEKHYGSDNPFDFMENISLEGKTNFFEK 464
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVG+YQ+A VMS G H F D DF
Sbjct: 465 RVGDYQRAGVMSRARGE-ETHKFTTDADF 492
>gi|312381384|gb|EFR27142.1| hypothetical protein AND_06323 [Anopheles darlingi]
Length = 390
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/329 (66%), Positives = 264/329 (80%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EPLL NP RF +FPIQYP IW+MYKKAEASFWT EEVDLS+D++ W++L E+
Sbjct: 68 PSI--EPLLMDNPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDMKDWDSLKPSER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
+D E++ LF+AIET+PCV +KA WA+NWI + + ER++AFA VEGIFFSGSF AIF
Sbjct: 186 RDPKERDFLFNAIETLPCVKRKADWAMNWISSKKANYGERIVAFAAVEGIFFSGSFAAIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K S +RV ++++AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKYLVQKPSRKRVTDIIRDAVMIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
ALP ++GMN ELMSQYIEFVADRLL LG K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 306 TKALPVDMLGMNCELMSQYIEFVADRLLVELGCEKVYNTKNPFSFMEFISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 366 KVGEYQKWGVMA----NRLDNVFTLDADF 390
>gi|157126966|ref|XP_001654749.1| ribonucleoside-diphosphate reductase small chain [Aedes aegypti]
gi|15638625|gb|AAL05057.1|AF411297_1 ribonucleotide reductase 2 [Aedes aegypti]
gi|82469974|gb|ABB77235.1| ribonucleotide reductase small subunit R2 [Aedes aegypti]
gi|108873070|gb|EAT37295.1| AAEL010691-PA [Aedes aegypti]
Length = 397
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/329 (68%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL WE L + EK
Sbjct: 75 PSI--EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLADWEKLKSGEK 132
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 133 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 192
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
+DS E+ LF+AI+ +PCV KKA WALNWI + F ER++AFA VEGIFFSGSF +IF
Sbjct: 193 RDSKEREYLFNAIDNLPCVKKKADWALNWISSKKANFGERVVAFAAVEGIFFSGSFASIF 252
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV +++EAV IE+EF+
Sbjct: 253 WLKKRGLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERVIEIIREAVLIEQEFL 312
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
ALP L+GMN +LMSQYIEFVADRLL LG K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 313 TKALPVDLLGMNCDLMSQYIEFVADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEK 372
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 373 KVGEYQKWGVMA----NRLDNVFTLDADF 397
>gi|306478720|ref|NP_042072.2| Ribonucleoside-diphosphate reductase small chain [Variola virus]
gi|464615|sp|P33799.1|RIR2_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 319
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF EVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M Y+EFVADRL+ LG+ ++Y V NP D+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>gi|392397812|ref|YP_006434413.1| ribonucleotide reductase subunit beta [Flexibacter litoralis DSM
6794]
gi|390528890|gb|AFM04620.1| ribonucleotide reductase, beta subunit [Flexibacter litoralis DSM
6794]
Length = 331
Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/335 (66%), Positives = 267/335 (79%), Gaps = 10/335 (2%)
Query: 1 MPSIP-----EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA 55
M +IP EPLLA NP+RF +FPI++ IW+MYK+AEASFWTAEE+DLS D+R WEA
Sbjct: 1 MSNIPSKELLHEPLLAENPNRFVLFPIKHDDIWQMYKQAEASFWTAEEIDLSNDMRDWEA 60
Query: 56 LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSL 115
++ +E+HFV HVLAFFAASDGIV ENL FM EVQ+ EAR FYGFQ+ ENIH+E YSL
Sbjct: 61 MSENERHFVKHVLAFFAASDGIVNENLVVNFMKEVQLPEARCFYGFQVMAENIHAETYSL 120
Query: 116 LLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGS 175
L++ YIK + EK+ LF+A++ + CVAKK WAL WI+ S+ FAERL+AFA VEGIFFSGS
Sbjct: 121 LIDGYIKGTKEKDYLFNALDNLECVAKKGNWALKWIE-SDNFAERLVAFAAVEGIFFSGS 179
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVE 234
FC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY + + KL +ER+ ++ +AV+
Sbjct: 180 FCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYNNYIENKLPKERIIEIITDAVK 239
Query: 235 IEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGK 294
IE+EFV DA+P +L+GMN +LMSQYIEFVADRLL L K Y NPF +ME+ISLQGK
Sbjct: 240 IEQEFVTDAIPVSLIGMNADLMSQYIEFVADRLLNELNCEKQYNSTNPFPFMEMISLQGK 299
Query: 295 TNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
TNFFEKRVGEYQKA VM N N + F +DEDF
Sbjct: 300 TNFFEKRVGEYQKAGVM---NNNDDSPKFSLDEDF 331
>gi|449549662|gb|EMD40627.1| hypothetical protein CERSUDRAFT_111206 [Ceriporiopsis subvermispora
B]
Length = 400
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/330 (68%), Positives = 263/330 (79%), Gaps = 8/330 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W LT DE+HFV
Sbjct: 73 QEPLLTESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLTNDERHFV 132
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQVAEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 133 SHVLAFFAASDGIVNENLVERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 192
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ +KA WAL WI D +FAERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 193 KQREHLFDAIDTIPCIKRKADWALRWISDKRSSFAERLIAFAAVEGIFFSGSFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E V+ ++ EAVEIE+EF+ DA
Sbjct: 253 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVRRIIMEAVEIEQEFLTDA 312
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+M+LISLQGKTNFFEKRV
Sbjct: 313 LPCALIGMNSKLMCQYIEFVADRLLVALGDPKVYNATNPFDFMDLISLQGKTNFFEKRVS 372
Query: 304 EYQKASVMSSLNGNGGN----HVFKIDEDF 329
+Y KA + +S G G N F +DEDF
Sbjct: 373 DYSKAGINAS--GAGANVEPSRGFTLDEDF 400
>gi|119174781|ref|XP_001239725.1| hypothetical protein CIMG_09346 [Coccidioides immitis RS]
gi|392869916|gb|EAS28456.2| ribonucleoside-diphosphate reductase small chain [Coccidioides
immitis RS]
Length = 408
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/335 (67%), Positives = 262/335 (78%), Gaps = 13/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EEPLL NP RF +FP++Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F+
Sbjct: 76 EEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHRLNDDERYFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 SRVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D TFA+RLIAFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFAQRLIAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR + E V+A++ EAVEIE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPGPEAVQAIITEAVEIEKEFLTDA 315
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYNATNPFDFMDNISLSGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTQKKEDTEEAIENGG--AFRFDEDF 408
>gi|544843|gb|AAB29634.1| C8L product [variola virus VAR, India-1967, Peptide, 333 aa]
Length = 333
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/323 (68%), Positives = 258/323 (79%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFW EEVD+S+D+ W LT DEK+F+ H
Sbjct: 16 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWIVEEVDISKDINDWNKLTPDEKYFIKH 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF EVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 76 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 136 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 196 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M Y+EFVADRL+ LG+ ++Y V NP D+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 256 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 316 KMGVMSQED----NH-FSLDVDF 333
>gi|449139107|gb|AGE89912.1| RR2B [Spodoptera littoralis NPV]
Length = 334
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/324 (66%), Positives = 257/324 (79%), Gaps = 1/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF MFPI+YP IW MYKKAEASFWT EEVDLS+D++ W++L E+ F+ H
Sbjct: 11 EPLLRENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDMKDWDSLKESERDFIKH 70
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQ+A+EN+HSEMYSLL++TY++D DE
Sbjct: 71 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAMENVHSEMYSLLIDTYVRDIDE 130
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K RLF+AIET+P +AKKA W++ WI + TFAER+IAFA VEGIFFSGSF AIFW+KKR
Sbjct: 131 KQRLFNAIETMPTIAKKAQWSIKWIKSDTATFAERIIAFAAVEGIFFSGSFAAIFWMKKR 190
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GL+PGLTFSNELISRDEGLH DFACL+YS + K + ERV ++ +AV IE+EF+ +ALP
Sbjct: 191 GLLPGLTFSNELISRDEGLHTDFACLMYSHIVNKPTRERVLDIITDAVSIEKEFLTEALP 250
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
A++GMN +LMSQYIEFVADRLL L + Y NPFD+M LISL+GKTNFFEK+V EY
Sbjct: 251 VAMLGMNNDLMSQYIEFVADRLLLELIGQRHYNTKNPFDFMNLISLEGKTNFFEKKVSEY 310
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM + N + F +D DF
Sbjct: 311 QKYGVMKGRSSNPMDDTFTLDADF 334
>gi|409080028|gb|EKM80389.1| hypothetical protein AGABI1DRAFT_113579 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198206|gb|EKV48132.1| ribonucleotide reductase beta subunit [Agaricus bisporus var.
bisporus H97]
Length = 408
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 261/329 (79%), Gaps = 5/329 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
+EPLL + RF +FPIQYP+IW+MYKKAEASFWTAEE+DLS+DL W + +E+HF+
Sbjct: 80 DEPLLKDSRRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWTNRMNDNERHFI 139
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 140 SHVLAFFAASDGIVNENLIERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 199
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF AIET+PC+ +KA WAL WI D TFAERLIAFA VEGIFFSGSF +IFW+K
Sbjct: 200 VQRDYLFDAIETIPCIKRKAEWALKWISDKRSTFAERLIAFAAVEGIFFSGSFASIFWMK 259
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E VKA++ EAV IE+EF+ DA
Sbjct: 260 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVKAIITEAVVIEQEFLTDA 319
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN ELM QYIEFVADRLL ALG KLY NPFD+M++ISLQGKTNFFEKRV
Sbjct: 320 LPVKLIGMNAELMCQYIEFVADRLLVALGNEKLYNKTNPFDFMDMISLQGKTNFFEKRVS 379
Query: 304 EYQKASV---MSSLNGNGGNHVFKIDEDF 329
+YQKA+V S+ + F IDEDF
Sbjct: 380 DYQKANVSHSTSTESTQPSGKTFTIDEDF 408
>gi|346465789|gb|AEO32739.1| hypothetical protein [Amblyomma maculatum]
Length = 395
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 263/327 (80%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +EPLL NP RF +FPI+Y IW MYKKAEASFWT EEVDL++DL HWE+L DE+HF
Sbjct: 73 VEDEPLLRENPRRFVIFPIEYEDIWRMYKKAEASFWTVEEVDLAKDLPHWESLKPDERHF 132
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++H+LAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIEN+HSEMYSLL++TYIKD
Sbjct: 133 ISHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDTYIKD 192
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
E+ +LF+AIET+PC+ +KA WAL WI D + +F ER++AFA VEGIFFSGSF +IFWL
Sbjct: 193 PAEREQLFNAIETMPCIKRKADWALRWIGDRNASFGERVVAFAAVEGIFFSGSFASIFWL 252
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLH DFACL++S L K S ERVK +V +AV IE+EF+ +
Sbjct: 253 KKRGLMPGLTFSNELISRDEGLHTDFACLMFSHLVHKPSAERVKQIVCDAVVIEQEFLTE 312
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP AL+GMN ELM +YIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 313 ALPVALIGMNCELMKRYIEFVADRLLVELGCEKVYNSENPFDFMEHISLEGKTNFFEKKV 372
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
GEYQKA VM+ VF +D DF
Sbjct: 373 GEYQKAGVMAKKE----EQVFTLDADF 395
>gi|303314521|ref|XP_003067269.1| ribonucleoside-diphosphate reductase small chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240106937|gb|EER25124.1| ribonucleoside-diphosphate reductase small chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320037571|gb|EFW19508.1| ribonucleoside-diphosphate reductase small subunit [Coccidioides
posadasii str. Silveira]
Length = 408
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 225/335 (67%), Positives = 262/335 (78%), Gaps = 13/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EEPLL NP RF +FP++Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F+
Sbjct: 76 EEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHRLNDDERYFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 SRVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D TFA+RLIAFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFAQRLIAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR + E V+A++ EAVEIE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPGPEAVQAIITEAVEIEKEFLTDA 315
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYNATNPFDFMDNISLSGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTQKKEDTEEAIENGG--AFRFDEDF 408
>gi|189199548|ref|XP_001936111.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983210|gb|EDU48698.1| ribonucleoside-diphosphate reductase subunit M2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 410
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/314 (69%), Positives = 256/314 (81%), Gaps = 2/314 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P +EPLL NP RF +FPI+Y +W+MYKKAEASFWTAEE+DLS+DL W + L DE
Sbjct: 67 PEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDE 126
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F++HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI +EN+HSE YSLL++TY
Sbjct: 127 RFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDTY 186
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
I D+ ++ LF+AIE +PC+ KKA WAL WI D + TFA RL+AFA VEGIFFSGSF +I
Sbjct: 187 ISDTRQRKYLFNAIENIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASI 246
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL + S E V+A++ EAVEIE+EF
Sbjct: 247 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNNRPSNEEVRAIITEAVEIEQEF 306
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 307 LSDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVYNATNPFDFMENISLAGKTNFFE 366
Query: 300 KRVGEYQKASVMSS 313
KRVG+YQKA VM+S
Sbjct: 367 KRVGDYQKAGVMAS 380
>gi|389593521|ref|XP_003722014.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
gi|321438516|emb|CBZ12275.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
Length = 388
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/325 (66%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W L E+HF+
Sbjct: 67 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 126
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 127 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 186
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 187 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 247 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 306
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEKRVGE
Sbjct: 307 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 367 YQKAGVMST---EGTSKKFSLSEDF 388
>gi|154340038|ref|XP_001565976.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063294|emb|CAM45500.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 388
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W AL E+HF+
Sbjct: 67 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWVALNDGERHFIK 126
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 127 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 186
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 187 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 247 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 306
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 307 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNATQPFDFMEMISLQGKTNFFEKKVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 367 YQKAGVMSA---EGTSKKFSLSEDF 388
>gi|291388369|ref|XP_002710634.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Oryctolagus cuniculus]
Length = 339
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/325 (68%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW LT+DEK+F++
Sbjct: 19 EEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNRLTSDEKYFIS 78
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 79 HVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 138
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 139 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 198
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 199 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 258
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 259 PVGLIGMNCILMKQYIEFVADRLLMELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 318
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 319 YQRFAVMAETTDN----VFTLDADF 339
>gi|348665308|gb|EGZ05139.1| hypothetical protein PHYSODRAFT_348632 [Phytophthora sojae]
gi|348675010|gb|EGZ14828.1| hypothetical protein PHYSODRAFT_560974 [Phytophthora sojae]
Length = 386
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/324 (68%), Positives = 254/324 (78%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP L NP+RF +FPIQ +W+MYKKAEASFWTAEE+DL DL W+ LT +E+ F+ H
Sbjct: 67 EPYLVSNPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLNDWQKLTDNERFFIKH 126
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F EVQV +AR FYGFQIAIENIH+E+YSLL++TYIKD+ E
Sbjct: 127 VLAFFAASDGIVNENLAMNFSNEVQVPKARCFYGFQIAIENIHAEVYSLLIDTYIKDTME 186
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN L AIET+PCV KKA WAL W D ++ ERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 187 KNHLLRAIETIPCVKKKAHWALKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL+FSNELISR+EG+H DFACL+YS L KL E RV +V+EAV IE EFVCD+LP
Sbjct: 247 GLMPGLSFSNELISRNEGMHTDFACLMYSKLVNKLPESRVHEIVREAVTIEHEFVCDSLP 306
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL +LG KLY V NPFDWM++ISLQGKTNFFEKRVGEY
Sbjct: 307 VELIGMNSTLMCQYIEFVADRLLYSLGVPKLYNVKNPFDWMDMISLQGKTNFFEKRVGEY 366
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
KA V + VF +D DF
Sbjct: 367 SKAGVGVA----AEEQVFTLDADF 386
>gi|225684487|gb|EEH22771.1| ribonucleoside-diphosphate reductase small chain A
[Paracoccidioides brasiliensis Pb03]
Length = 413
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/338 (66%), Positives = 264/338 (78%), Gaps = 16/338 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FP++Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F+
Sbjct: 78 DEPLLQENPHRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFI 137
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 138 SHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 197
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI+ E TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 198 KQRTYLFDAIDTIPCIRKKADWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFASIFWLK 257
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR + S E V+ ++ EAV IE+EF+ DA
Sbjct: 258 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQEFLTDA 317
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 318 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKVYNSTNPFDFMDNISLTGKTNFFEKRVG 377
Query: 304 EYQKASVMSSL------------NGNGGNHVFKIDEDF 329
+YQKA VM+S N NGG F DEDF
Sbjct: 378 DYQKAGVMASTKKEAASDDAEQQNENGG--AFTFDEDF 413
>gi|154337607|ref|XP_001565036.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062075|emb|CAM45178.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 392
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W AL E+HF+
Sbjct: 71 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWVALNDGERHFIK 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 131 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 191 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 250
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 251 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 311 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNATQPFDFMEMISLQGKTNFFEKKVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 371 YQKAGVMSA---EGTSKKFSLSEDF 392
>gi|436834327|ref|YP_007319543.1| Ribonucleoside-diphosphate reductase [Fibrella aestuarina BUZ 2]
gi|384065740|emb|CCG98950.1| Ribonucleoside-diphosphate reductase [Fibrella aestuarina BUZ 2]
Length = 330
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/324 (66%), Positives = 264/324 (81%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL + RF +FPI++ IW+MYKK EASFWTAEE+DL QDL+ W +L+ E+HF++H
Sbjct: 8 EPLLEEDKSRFVLFPIKHNDIWQMYKKHEASFWTAEEIDLGQDLKDWNSLSDGERHFISH 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F++EVQ AEA+ FYGFQI +ENIHSE YSLL++TYIKD E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQIMMENIHSETYSLLIDTYIKDPIE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+R+ +AI+T+PCV KKA WAL WI +FAERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 128 KDRMLNAIDTIPCVQKKADWALRWISNG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKRG 186
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY+ +R K+ + + +++ AVEIE+EFV DALP
Sbjct: 187 LMPGLTFSNELISRDEGLHRDFACLLYTDHIRNKMDPQAIYDIIRNAVEIEQEFVSDALP 246
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN +LM QYIEFVAD LL +LG +Y V+NPFD+M++ISLQGKTNFFEKRVGEY
Sbjct: 247 VSLIGMNADLMKQYIEFVADHLLVSLGLNSIYNVSNPFDFMDMISLQGKTNFFEKRVGEY 306
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM+S + + F ++EDF
Sbjct: 307 QKAGVMASTSKDKEVTKFSMEEDF 330
>gi|170032272|ref|XP_001844006.1| ribonucleoside-diphosphate reductase small chain [Culex
quinquefasciatus]
gi|167872122|gb|EDS35505.1| ribonucleoside-diphosphate reductase small chain [Culex
quinquefasciatus]
Length = 391
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 260/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL WE L + EK
Sbjct: 69 PSI--EPLLKDNPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLGDWEKLKSGEK 126
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 127 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 186
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
+D E+ LF+AIET+PCV KKA WA+NWI F ER++AFA VEGIFFSGSF +IF
Sbjct: 187 RDPKEREYLFNAIETLPCVKKKADWAMNWISSKHANFGERVVAFAAVEGIFFSGSFASIF 246
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV +++EAV IE+EF+
Sbjct: 247 WLKKRGLMPGLTFSNELISRDEGLHTDFACLMFRYLVQKPSKERVLEIIREAVVIEQEFL 306
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
ALP L+GMN ELMSQYIEFVADRLL LG K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 307 TKALPVDLLGMNCELMSQYIEFVADRLLLELGNEKIYNTKNPFSFMEFISLEGKTNFFEK 366
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 367 KVGEYQKWGVMA----NRLDNVFTLDADF 391
>gi|406025255|ref|YP_006705556.1| ribonucleoside-diphosphate reductase subunit M2 [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
gi|404432854|emb|CCM10136.1| Ribonucleoside-diphosphate reductase subunit M2 [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
Length = 331
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 262/325 (80%), Gaps = 2/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL N +RF +FPI++ IW YK+AEASFWTAEE+DLSQD++ WE L + EKHF+T
Sbjct: 8 DEPLLQENKNRFVLFPIEHQDIWGFYKQAEASFWTAEEIDLSQDIKDWENLISGEKHFIT 67
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL F EVQ EA+ FYGFQIAIENIHSE YSLL++TY+KD
Sbjct: 68 HVLAFFAASDGIVNENLVQNFANEVQYTEAKFFYGFQIAIENIHSEAYSLLIDTYVKDPK 127
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E++RLF+AIET+ V KKA WAL WI +F ERLIAFA VEGIFFSGSFCAIFWLKKR
Sbjct: 128 ERHRLFNAIETIEWVGKKADWALRWISKG-SFPERLIAFAAVEGIFFSGSFCAIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY+ ++ KL E++V ++ +AV IE EFV DAL
Sbjct: 187 GLMPGLTFSNELISRDEGLHCDFACLLYNAHIKHKLPEQQVAQIIADAVAIESEFVSDAL 246
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+QYI+FVADRLL LG K+Y V NPFD+ME+I+LQGKTNFFEKRVGE
Sbjct: 247 PVKLIGMNATLMTQYIQFVADRLLLELGCKKIYHVTNPFDFMEMIALQGKTNFFEKRVGE 306
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VM+S++ + FK+DE F
Sbjct: 307 YQKSGVMNSISEDKDKARFKLDEPF 331
>gi|41054952|ref|NP_955770.1| ribonucleoside-diphosphate reductase subunit M2 B [Mus musculus]
gi|81885688|sp|Q6PEE3.1|RIR2B_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
AltName: Full=TP53-inducible ribonucleotide reductase M2
B; AltName: Full=p53-inducible ribonucleotide reductase
small subunit 2-like protein; Short=p53R2
gi|34786000|gb|AAH58103.1| Ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
gi|74218244|dbj|BAE23760.1| unnamed protein product [Mus musculus]
Length = 351
Score = 455 bits (1170), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLLG LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|397531941|gb|AFO54480.1| ribonucleotide reductase small subunit p53R2i [Carassius carassius]
Length = 337
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/328 (66%), Positives = 263/328 (80%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S+ +EPLL NP RF +FPIQYP IW+MYK+A+ASFWT EEVDLS+DL HW++L ++EKH
Sbjct: 14 SVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDSLKSEEKH 73
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 74 FISHVLAFFAASDGIVNENLVQRFSQEVQIPEARSFYGFQILIENVHSEMYSMLINTYIR 133
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E++ LF+AI T+PCV +KA WAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 134 DLKERDYLFNAIHTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 193
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLM GLT+SNELISRDEGLHC+FACLLYS L K S +RVK ++ +AV IE+EF+
Sbjct: 194 LKKRGLMAGLTYSNELISRDEGLHCNFACLLYSYLVKKPSADRVKDIITKAVSIEQEFLT 253
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKR
Sbjct: 254 EALPVNLIGMNCSLMKQYIEFVADRLLMDLGLPKVFKSENPFDFMESISLEGKTNFFEKR 313
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N + F +D DF
Sbjct: 314 VGEYQRLGVMS----NVMDCEFTLDADF 337
>gi|327403795|ref|YP_004344633.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
16823]
gi|327319303|gb|AEA43795.1| Ribonucleoside-diphosphate reductase [Fluviicola taffensis DSM
16823]
Length = 324
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 264/325 (81%), Gaps = 7/325 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L+ N +RF +FPIQ+ IW YKKAEASFWTAEE+DLS DL WE L+ DE+HFV
Sbjct: 5 EPILSENKNRFVLFPIQHEDIWSFYKKAEASFWTAEEIDLSPDLIDWETKLSDDERHFVK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQ+A+ENIHSE YSLL++TYIKD
Sbjct: 65 HVLAFFAASDGIVNENLAEHFLAEVQYTEAKFFYGFQVAMENIHSETYSLLIDTYIKDQK 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN LF+A++T+ CV KKA WAL WID +FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 EKNHLFNALDTIDCVRKKADWALRWIDNG-SFAERLVAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGL+FSNELISRDEGLHCDFACLLY+ L +LS+E+V+ ++ +AVEIE+EFV DAL
Sbjct: 184 GLMPGLSFSNELISRDEGLHCDFACLLYTKHLIHQLSKEQVQEIILDAVEIEKEFVTDAL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL LG K++ NPFD+M++IS+QGKTNFFEKRV E
Sbjct: 244 PVKLIGMNADLMAQYIEFVADRLLTELGNPKVFNTTNPFDFMDMISIQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VMS N + F +DE+F
Sbjct: 304 YQKSGVMS----NKEDQTFSLDEEF 324
>gi|401422190|ref|XP_003875583.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491821|emb|CBZ27094.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 392
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W AL E+HF+
Sbjct: 71 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALNDGERHFIK 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 131 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ +KA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 191 EKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 250
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 251 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 311 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQPFDFMEMISLQGKTNFFEKKVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 371 YQKAGVMST---EGTSKKFSLSEDF 392
>gi|410987580|ref|XP_004000076.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Felis
catus]
Length = 351
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYKKA+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|383861071|ref|XP_003706010.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Megachile rotundata]
Length = 383
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/309 (70%), Positives = 257/309 (83%), Gaps = 2/309 (0%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
PE EPLL NP RF +FPIQ+P IW+MYKKAEASFWT EEVDLS+D W+ LT+ EKHF
Sbjct: 61 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDTFDWDRLTSSEKHF 120
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQ+A+EN+HSEMYSLL++TYI D
Sbjct: 121 ISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIAD 180
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E++ LF+AIE +PCVAKKA WALNWI+ + TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 181 AKERDFLFNAIENLPCVAKKANWALNWINHETATFPERVVAFAAVEGIFFSGSFAAIFWL 240
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S ERV +++K+AVEIE+EF+ D
Sbjct: 241 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIIQKPSSERVTSIIKDAVEIEQEFLTD 300
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN +LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 301 ALPVEMIGMNCKLMCQYIEFVADRLLVELGCQKVYMSENPFDFMEHISLEGKTNFFEKKV 360
Query: 303 GEYQKASVM 311
GEYQK VM
Sbjct: 361 GEYQKWGVM 369
>gi|358397948|gb|EHK47316.1| hypothetical protein TRIATDRAFT_154508 [Trichoderma atroviride IMI
206040]
Length = 418
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/343 (63%), Positives = 267/343 (77%), Gaps = 17/343 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EP+L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 78 PDEIDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 137
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K+F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 138 KYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 197
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
+K+ ++N LF+AIET+PC+ KKA WA+ WI D +FA+RL+AFA VEGIFFSG+F +I
Sbjct: 198 VKEHSQRNYLFNAIETIPCIRKKADWAIKWIQDKDSSFAQRLVAFAAVEGIFFSGAFASI 257
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S+E ++ ++ +AV IE+EF
Sbjct: 258 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEIIREIITDAVRIEQEF 317
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKTNFFE
Sbjct: 318 LTEALPCALLGMNATLMKQYIEFVADRLLVALGNEKIYKSSNPFDFMENISLGGKTNFFE 377
Query: 300 KRVGEYQKASVMSSLN-------------GNGGNHVFKIDEDF 329
KRVGEYQKA VM+S NGG+ F D+DF
Sbjct: 378 KRVGEYQKAGVMNSTKKPVEASSAEESKADNGGD--FSFDDDF 418
>gi|358383626|gb|EHK21290.1| hypothetical protein TRIVIDRAFT_78453 [Trichoderma virens Gv29-8]
Length = 415
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/342 (63%), Positives = 269/342 (78%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADE 60
P +EP+L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 76 PDEVDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 135
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K+F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 136 KYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 195
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK++ ++N LF+AIET+PC+ KKA WA+ WI D + +FA+RL+AFA VEGIFFSG+F +I
Sbjct: 196 IKENSQRNYLFNAIETIPCIRKKADWAIKWIQDKNSSFAQRLVAFAAVEGIFFSGAFASI 255
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S+E ++ ++ +AV IE+EF
Sbjct: 256 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEVIRDIITDAVRIEQEF 315
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKTNFFE
Sbjct: 316 LTEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKIYKSSNPFDFMENISLGGKTNFFE 375
Query: 300 KRVGEYQKASVMSSL------------NGNGGNHVFKIDEDF 329
KRV +YQKA VM+S + NGG+ F D+DF
Sbjct: 376 KRVADYQKAGVMNSTKKVVEEAGAESKDSNGGD--FSFDDDF 415
>gi|281340156|gb|EFB15740.1| hypothetical protein PANDA_011632 [Ailuropoda melanoleuca]
Length = 336
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 16 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 76 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 136 KREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 195
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 196 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 256 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 316 YQRFAVMAETTDN----VFTLDADF 336
>gi|75076588|sp|Q4R741.1|RIR2B_MACFA RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
gi|67969468|dbj|BAE01083.1| unnamed protein product [Macaca fascicularis]
gi|355698140|gb|EHH28688.1| Ribonucleoside-diphosphate reductase subunit M2 B [Macaca mulatta]
gi|355779870|gb|EHH64346.1| Ribonucleoside-diphosphate reductase subunit M2 B [Macaca
fascicularis]
gi|380788457|gb|AFE66104.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Macaca
mulatta]
gi|383418729|gb|AFH32578.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Macaca
mulatta]
Length = 351
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|402878875|ref|XP_003903089.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Papio anubis]
Length = 351
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|194673004|ref|XP_607398.4| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Bos taurus]
gi|297482473|ref|XP_002692807.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Bos
taurus]
gi|296480530|tpg|DAA22645.1| TPA: ribonucleotide reductase M2 polypeptide-like [Bos taurus]
Length = 351
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYKKA+ASFWTAEEVDLS+DL HW L ++EK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|339898226|ref|XP_003392500.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
gi|321399462|emb|CBZ08664.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
Length = 392
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W L E+HF+
Sbjct: 71 EEPLQQENPLRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 131 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 191 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 250
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 251 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 311 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKKVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 371 YQKAGVMST---EGTSKKFSLSEDF 392
>gi|389639056|ref|XP_003717161.1| ribonucleoside-diphosphate reductase small subunit [Magnaporthe
oryzae 70-15]
gi|351642980|gb|EHA50842.1| ribonucleoside-diphosphate reductase small subunit [Magnaporthe
oryzae 70-15]
Length = 412
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/342 (64%), Positives = 266/342 (77%), Gaps = 20/342 (5%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L NP RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+DL W LT DEK+F+
Sbjct: 73 DEPILQENPQRFVLFPIRYHEVWQMYKKAEASFWTAEEIDLSKDLHDWNNKLTDDEKYFI 132
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK++
Sbjct: 133 SHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKET 192
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WAL WI D TFA RLIAFA VEGIFFSG+F +IFWLK
Sbjct: 193 AQRTYLFNAIDTIPCIRKKADWALRWITDKKSTFATRLIAFAVVEGIFFSGAFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+SLL + ++E VK +V +AV+IE+EF+ +A
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHTDFACLLFSLLNNRPNKEVVKEIVVDAVKIEQEFLTEA 312
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRVG
Sbjct: 313 LPCALLGMNANLMKQYIEFVADRLLVALGNEKVYRATNPFDFMENISLGGKTNFFEKRVG 372
Query: 304 EYQKASVMSSL----------------NGNGGNHVFKIDEDF 329
EYQKA VM+S + N G+ F D+DF
Sbjct: 373 EYQKAGVMASTKKAPVEEKTSTSPQAEDSNSGDFTF--DDDF 412
>gi|400597058|gb|EJP64802.1| ribonucleotide reductase [Beauveria bassiana ARSEF 2860]
Length = 416
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/342 (64%), Positives = 265/342 (77%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W LTADE
Sbjct: 77 PEEVDEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTADE 136
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 137 QYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 196
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AI+T+PC+ KKA WAL WI D TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 197 IKEQAQRTYLFNAIDTIPCIRKKADWALRWISDKESTFAQRLVAFAAVEGIFFSGAFASI 256
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S+E +K ++ +AV IE+EF
Sbjct: 257 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLNNRASKEIIKTIITDAVTIEKEF 316
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPC L+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 317 LTEALPCGLLGMNATLMQQYIEFVADRLLVALGNEKIYKSTNPFDFMENISLGGKTNFFE 376
Query: 300 KRVGEYQKASVMSSL------------NGNGGNHVFKIDEDF 329
KRVGEYQKA VM+S N GG+ F D+DF
Sbjct: 377 KRVGEYQKAGVMASASKKADDGTSPDENKAGGD--FSFDDDF 416
>gi|15617531|ref|NP_258331.1| RR2B [Spodoptera litura NPV]
gi|15553267|gb|AAL01745.1|AF325155_57 ribonucleotide reductase small subunit homolog [Spodoptera litura
NPV]
Length = 333
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/329 (66%), Positives = 261/329 (79%), Gaps = 5/329 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ +EPLL NP RF MFPI+YP IW MYKKAEASFWT EEVDLS+DL W++L E++
Sbjct: 8 NMSDEPLLQENPRRFVMFPIEYPDIWNMYKKAEASFWTVEEVDLSKDLSDWDSLKESERN 67
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ HVLAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIEN+HSEMYSLL++TY+K
Sbjct: 68 FIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSLLIDTYVK 127
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D+DEK RLF+AIET+P +AKKA W++ WI + TFAERLIAFA VEGIFFSGSF AIFW
Sbjct: 128 DNDEKRRLFNAIETMPAIAKKAEWSIKWIKSATATFAERLIAFAAVEGIFFSGSFAAIFW 187
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
+KKRGLMPGLTFSNELISRDEGLH DFACL+YS + K + +R+ ++ EAV IE EFV
Sbjct: 188 MKKRGLMPGLTFSNELISRDEGLHTDFACLMYSHIVNKPTRDRILDIITEAVAIENEFVT 247
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP A++GMN +LMS+YIEFVADRLL L + Y NPFD+M LISL+GKTNFFEK+
Sbjct: 248 EALPVAMLGMNNDLMSKYIEFVADRLLLELIGERHYNTKNPFDFMNLISLEGKTNFFEKK 307
Query: 302 VGEYQKASVMSSLNGNG-GNHVFKIDEDF 329
V EYQK VMS GN + +F +D F
Sbjct: 308 VSEYQKYGVMS---GNKLEDDIFTLDAAF 333
>gi|401424595|ref|XP_003876783.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493026|emb|CBZ28311.1| ribonucleoside-diphosphate reductase small chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 388
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W AL E+HF+
Sbjct: 67 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALNDGERHFIK 126
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 127 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 186
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ +KA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 187 EKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 247 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 306
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 307 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQPFDFMEMISLQGKTNFFEKKVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 367 YQKAGVMST---EGTSKKFSLSEDF 388
>gi|302497417|ref|XP_003010709.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
gi|291174252|gb|EFE30069.1| hypothetical protein ARB_03411 [Arthroderma benhamiae CBS 112371]
Length = 408
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/335 (66%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+D+ W L DE++F+
Sbjct: 76 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERYFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+A++ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAVTIEQEFLTDA 315
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTKKEEDSSEEPENGG--AFRFDEDF 408
>gi|8101697|gb|AAF72618.1|AF252539_2 ribonucleotide reductase small subunit M2 [Leishmania amazonensis]
Length = 345
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/325 (66%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W L E+HF+
Sbjct: 24 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 84 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 143
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 144 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 203
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 204 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 263
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEKRVGE
Sbjct: 264 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGE 323
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 324 YQKAGVMST---EGTSKKFSLSEDF 345
>gi|146090970|ref|XP_001466408.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
gi|134070770|emb|CAM69127.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania infantum JPCM5]
Length = 388
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W L E+HF+
Sbjct: 67 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 126
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 127 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 186
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 187 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 246
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 247 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 306
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 307 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKKVGE 366
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 367 YQKAGVMST---EGTSKKFSLSEDF 388
>gi|73974198|ref|XP_539109.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Canis lupus familiaris]
Length = 351
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|74025554|ref|XP_829343.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei]
gi|70834729|gb|EAN80231.1| ribonucleoside-diphosphate reductase small chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 337
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 250/325 (76%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+YP IW+ YKKA ++FW E + L D+ WE L E+HF+
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKKARSNFWAMENIYLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAA DGIVLEN RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ D D
Sbjct: 76 HVLAFFAARDGIVLENFVQRFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + KL +RV ++ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL +LGY + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>gi|154296564|ref|XP_001548712.1| ribonucleotide reductase small subunit [Botryotinia fuckeliana
B05.10]
gi|347828025|emb|CCD43722.1| similar to ribonucleoside-diphosphate reductase small subunit
[Botryotinia fuckeliana]
Length = 407
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/344 (64%), Positives = 267/344 (77%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P +EPLL NP+RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W E L DE
Sbjct: 66 PEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNERLNDDE 125
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 126 RYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 185
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ +K LF+AI+T+PC+ KKA WA+ WI D + TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 186 IKEQSQKTYLFNAIDTIPCIKKKADWAVKWIQDKNSTFAQRLVAFAAVEGIFFSGSFASI 245
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L+ + S++ V+ ++ EAVEIE+EF
Sbjct: 246 FWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLKHRPSKQAVQDVITEAVEIEQEF 305
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL +LG K Y ANPFD+ME ISL GKTNFFE
Sbjct: 306 LTEALPCALLGMNSNLMKQYIEFVADRLLLSLGNDKYYKSANPFDFMENISLAGKTNFFE 365
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKIDEDF 329
KRVG+YQKA VM+ NGG+ F DEDF
Sbjct: 366 KRVGDYQKAGVMAGTQKKHEDTEAQTEAKAENGGD--FNFDEDF 407
>gi|3220181|gb|AAC23560.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
Length = 354
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W AL E+HF+
Sbjct: 33 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWAALNDGERHFIK 92
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 93 HVLAFFAGSDGIVVENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 152
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ +KA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 153 EKLRLLHAIQTIPCIQRKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 212
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 213 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 272
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEK+VGE
Sbjct: 273 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYNSTQPFDFMEMISLQGKTNFFEKKVGE 332
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 333 YQKAGVMST---EGTSKKFSLSEDF 354
>gi|4836362|gb|AAD30422.1|AF117061_1 ribonucleotide reductase R2 subunit [Aedes albopictus]
Length = 398
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 259/329 (78%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL WE L + EK
Sbjct: 76 PSI--EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLADWEKLKSGEK 133
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV NL RF EVQV EAR FYGFQIA+EN+HSEMYSLL++TYI
Sbjct: 134 HFISHVLAFFAASDGIVNVNLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 193
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
+DS E+ LF+AI+ +PCV KKA WALNWI + F ER++AFA VEGIFFSG+F +IF
Sbjct: 194 RDSKEREYLFNAIDNLPCVKKKADWALNWISSKQANFGERVVAFAAVEGIFFSGTFASIF 253
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV +++EAV IE+EF+
Sbjct: 254 WLKKRGLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERVIEIIREAVLIEQEFL 313
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
ALP L+GMN ELMSQYIEF ADRLL LG K+Y NPF +ME ISL+GKTNFFEK
Sbjct: 314 TKALPVDLLGMNCELMSQYIEFEADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEK 373
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VM+ N ++VF +D DF
Sbjct: 374 KVGEYQKWGVMA----NRQDNVFTLDADF 398
>gi|167519412|ref|XP_001744046.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778008|gb|EDQ91624.1| predicted protein [Monosiga brevicollis MX1]
Length = 329
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/327 (66%), Positives = 260/327 (79%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
I EPLL NP RF + PIQ+ IW+MYKKAEASFWT EEVDL +DL W L DE+ F
Sbjct: 7 IQAEPLLRANPRRFVILPIQHDAIWKMYKKAEASFWTVEEVDLGRDLVDWNKLNKDEQFF 66
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ HVLAFFAASDGIV ENL RFMTEVQ+ EAR FYGFQIAIENIHSEMYS L+ETY+ D
Sbjct: 67 IKHVLAFFAASDGIVNENLVERFMTEVQLPEARCFYGFQIAIENIHSEMYSRLIETYVND 126
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
S EK+ LF+AIET+P V +KA WA+ WI + +F ER++AFA VEGIFFSGSF AIFWL
Sbjct: 127 SAEKDSLFNAIETLPAVRRKAEWAMRWISHDKASFGERVVAFAAVEGIFFSGSFAAIFWL 186
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLH DFACL++S+L+ + S+ERV ++ +AVEIE++F+ +
Sbjct: 187 KKRGLMPGLTFSNELISRDEGLHTDFACLMFSMLKKRPSKERVTGIIMDAVEIEQDFLTN 246
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALPC L+GMN LM QYIEFV+DRLL ALG K++ NPFD+ME IS++GKTNFFEKRV
Sbjct: 247 ALPCGLLGMNATLMKQYIEFVSDRLLVALGCEKIFNSENPFDFMESISIEGKTNFFEKRV 306
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
GEYQKA VM+ + HVF +D DF
Sbjct: 307 GEYQKAGVMA----DKDQHVFTLDADF 329
>gi|403299934|ref|XP_003940726.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Saimiri boliviensis boliviensis]
Length = 351
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K + NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKFFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|340726313|ref|XP_003401504.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 1 [Bombus terrestris]
Length = 384
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/310 (70%), Positives = 256/310 (82%), Gaps = 2/310 (0%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
PE EPLL NP RF +FPIQ+P IW+MYKKAEASFWT EEVDLS+D+ W L +DEKHF
Sbjct: 62 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDIFDWNHLNSDEKHF 121
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIEN+HSEMYS+L++TYI D
Sbjct: 122 ISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITD 181
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E++ LF+AIE +PCVAKKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 182 TKERDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 241
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S +RV +++K+AV+IE+EF+ D
Sbjct: 242 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTD 301
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 302 ALPVQMIGMNCTLMCQYIEFVADRLLTELGCEKIYMSENPFDFMEHISLEGKTNFFEKKV 361
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 362 GEYQKWGVMQ 371
>gi|397531943|gb|AFO54481.1| ribonucleotide reductase small subunit p53R2ii [Carassius
carassius]
Length = 349
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/328 (66%), Positives = 262/328 (79%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S+ +EPLL NP RF +FPIQYP IW+MYK+A+ASFWT EEVDLS+DL HW++L ++EKH
Sbjct: 26 SVEDEPLLKENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDSLKSEEKH 85
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 86 FISHVLAFFAASDGIVNENLVQRFSQEVQIPEARSFYGFQILIENVHSEMYSMLINTYIR 145
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E++ LF+AI T+P V +KA WAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 146 DLKERDFLFNAIHTMPFVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 205
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L K S +RVK ++ +AV IE+EF+
Sbjct: 206 LKKRGLMPGLTYSNELISRDEGLHCNFACLMYSYLVKKPSADRVKDIITKAVSIEQEFLT 265
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEKR
Sbjct: 266 EALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKVYKSENPFDFMESISLEGKTNFFEKR 325
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
V EYQ+ VMS N + F +D DF
Sbjct: 326 VAEYQRLGVMS----NVMDCEFTLDADF 349
>gi|402079098|gb|EJT74363.1| ribonucleoside-diphosphate reductase small subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 420
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/342 (64%), Positives = 266/342 (77%), Gaps = 20/342 (5%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DEK+F+
Sbjct: 81 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKLNEDEKYFI 140
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 141 SHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 200
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+A++T+PC+ KKA WAL WI D TFA RLIAFA VEGIFFSG+F +IFWLK
Sbjct: 201 AQRTYLFNAVDTIPCIRKKADWALKWISDKESTFASRLIAFAAVEGIFFSGAFASIFWLK 260
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S ++ + S+E V+ ++ +AV IE+EF+ +A
Sbjct: 261 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHMKNRPSKETVQKIIVDAVNIEQEFLTEA 320
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKTNFFEKRVG
Sbjct: 321 LPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYRASNPFDFMENISLGGKTNFFEKRVG 380
Query: 304 EYQKASVMSSLN----------------GNGGNHVFKIDEDF 329
EYQKA VM+S + GNGG+ F D+DF
Sbjct: 381 EYQKAGVMASTSKKVAEEESDSTPEPAGGNGGDFTF--DDDF 420
>gi|42544136|ref|NP_056528.2| ribonucleoside-diphosphate reductase subunit M2 B isoform 1 [Homo
sapiens]
gi|114621161|ref|XP_001153916.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Pan troglodytes]
gi|74727333|sp|Q7LG56.1|RIR2B_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B;
AltName: Full=TP53-inducible ribonucleotide reductase M2
B; AltName: Full=p53-inducible ribonucleotide reductase
small subunit 2-like protein; Short=p53R2
gi|261278726|pdb|3HF1|A Chain A, Crystal Structure Of Human P53r2
gi|261278727|pdb|3HF1|B Chain B, Crystal Structure Of Human P53r2
gi|7229086|dbj|BAA92434.1| ribonucleotide reductase [Homo sapiens]
gi|7229115|dbj|BAA92493.1| ribonucleotide reductase [Homo sapiens]
gi|45259569|dbj|BAD12267.1| p53-inducible ribonucleotide reductase small subunit 2 [Homo
sapiens]
gi|52545612|emb|CAB70703.2| hypothetical protein [Homo sapiens]
gi|63055293|gb|AAY29059.1| ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|80473666|gb|AAI08262.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|109659128|gb|AAI17497.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|119612247|gb|EAW91841.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_b [Homo
sapiens]
gi|120660296|gb|AAI30629.1| Ribonucleotide reductase M2 B (TP53 inducible) [Homo sapiens]
gi|190689549|gb|ACE86549.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
construct]
gi|190690911|gb|ACE87230.1| ribonucleotide reductase M2 B (TP53 inducible) protein [synthetic
construct]
gi|261859014|dbj|BAI46029.1| ribonucleotide reductase M2 B [synthetic construct]
gi|313882916|gb|ADR82944.1| ribonucleotide reductase M2 B (TP53 inducible) [synthetic
construct]
gi|410253810|gb|JAA14872.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410292306|gb|JAA24753.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410350059|gb|JAA41633.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
gi|410350061|gb|JAA41634.1| ribonucleotide reductase M2 B (TP53 inducible) [Pan troglodytes]
Length = 351
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|197101489|ref|NP_001125944.1| ribonucleoside-diphosphate reductase subunit M2 B [Pongo abelii]
gi|75041724|sp|Q5R9G0.1|RIR2B_PONAB RecName: Full=Ribonucleoside-diphosphate reductase subunit M2 B
gi|55729743|emb|CAH91600.1| hypothetical protein [Pongo abelii]
Length = 351
Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|159465291|ref|XP_001690856.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
reinhardtii]
gi|158279542|gb|EDP05302.1| ribonucleoside-diphosphate reductase small subunit [Chlamydomonas
reinhardtii]
Length = 493
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/328 (64%), Positives = 256/328 (78%), Gaps = 4/328 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL NP+RF +FPI+YP +WE YK+ ASFWT EEVD + DL W L +E+ F+
Sbjct: 166 DEDLLRENPNRFTLFPIKYPDLWEFYKQGVASFWTVEEVDFTGDLIDWHRLKPEEQRFIK 225
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIV+ENLA RFM+++QV EARAFYGFQIA+EN+HSEMYS+LL+ Y+++ +
Sbjct: 226 YVLAFFAASDGIVMENLAARFMSDIQVPEARAFYGFQIAMENVHSEMYSVLLDHYVREPE 285
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+N+LF AI T+P VAKKA WA+ WI S FAERL+ FACVEGI FSGSFC+IFWLKKR
Sbjct: 286 ERNQLFDAIHTIPTVAKKAEWAMRWISSSNVFAERLVGFACVEGIHFSGSFCSIFWLKKR 345
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGL+FSN LISRDEGLHCDFAC LYS L+ +LS ERV +V EAV++E EF +AL
Sbjct: 346 CLMPGLSFSNVLISRDEGLHCDFACCLYSHLKNRLSRERVLQIVDEAVQLEDEFCTEALS 405
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN +LM QYI FVADRLL +LGY K Y NPFDWME+ISLQGK NFFE+RVGEY
Sbjct: 406 CELLGMNADLMRQYIRFVADRLLVSLGYEKHYNTRNPFDWMEMISLQGKANFFERRVGEY 465
Query: 306 QKASVMSSLNGNGGN----HVFKIDEDF 329
Q+A VM NGN +VF + DF
Sbjct: 466 QRAGVMGGNNGNSARDPSEYVFTTEADF 493
>gi|440903111|gb|ELR53814.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial [Bos
grunniens mutus]
Length = 336
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 258/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYKKA+ASFWTAEEVDLS+DL HW L + EK+F++
Sbjct: 16 EEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNKLKSGEKYFIS 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 76 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 136 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 195
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 196 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 256 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 316 YQRFAVMAETTDN----VFTLDADF 336
>gi|348688371|gb|EGZ28185.1| hypothetical protein PHYSODRAFT_321864 [Phytophthora sojae]
gi|348688372|gb|EGZ28186.1| hypothetical protein PHYSODRAFT_284208 [Phytophthora sojae]
Length = 384
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/327 (67%), Positives = 254/327 (77%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+P EP L NP+RF +FPIQ +W+MYKKAEASFWTAEE+DL DL+ W LT +E+ F
Sbjct: 62 LPTEPFLVENPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLKDWANLTDNERFF 121
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ HVLAFFAASDGIV ENLA F EVQV EAR FYGFQIAIENIHSE+YSLL++TYIKD
Sbjct: 122 IKHVLAFFAASDGIVNENLAMNFSNEVQVPEARCFYGFQIAIENIHSEVYSLLIDTYIKD 181
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ EK+ L AIET+PCV KKA WAL W D ++ ERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 182 AVEKDHLLRAIETIPCVKKKAHWALKWCDPRVSSYPERLLAFAAVEGIFFSGSFCSIFWL 241
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGL+FSNELISRDEG+H DFACL+YS L KL E RV +V++AV IE EFV D
Sbjct: 242 KKRGLMPGLSFSNELISRDEGMHTDFACLMYSKLVNKLPESRVHEIVRDAVTIEHEFVRD 301
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
+LP L+GMN LM QYIEFVADRLL +LG K+Y NPFDWM++ISLQGKTNFFEKRV
Sbjct: 302 SLPVELIGMNSSLMCQYIEFVADRLLYSLGVSKIYNAKNPFDWMDMISLQGKTNFFEKRV 361
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
GEY KA V + VF +D DF
Sbjct: 362 GEYSKAGVGVA----AEEQVFTLDADF 384
>gi|345107208|ref|YP_004821373.1| ribonucleotide reductase small subunit [Yoka poxvirus]
gi|344267282|gb|AEN03609.1| ribonucleotide reductase small subunit [Yoka poxvirus]
Length = 321
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/324 (66%), Positives = 260/324 (80%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N +RF +FPIQY IW MYKKAEASFWT EEVDLS+D+ W LT+DEKHF+ H
Sbjct: 2 EPILKENKNRFVIFPIQYRDIWNMYKKAEASFWTVEEVDLSKDINDWNTLTSDEKHFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQ+AIENIHSEMYSLL++ Y+KD+DE
Sbjct: 62 VLAFFAASDGIVNENLVERFCSEVQITEARCFYGFQMAIENIHSEMYSLLIDAYVKDTDE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF++IET+PCV KKA WAL WI ++ ++ ERL+AFA VEGIFFSGSF +IFWLKKR
Sbjct: 122 RMYLFNSIETMPCVKKKADWALKWIHNNDASYGERLVAFAAVEGIFFSGSFASIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L +E+RV +++ EAV IE+EF+ DALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPNEDRVVSIISEAVNIEQEFLTDALP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN ++M+ YI+FVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCDMMNTYIKFVADRLLLELGFKKIYNVKNPFDFMECISLEGKTNFFEKRVAEY 301
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM+S N F +D DF
Sbjct: 302 QKMGVMNSNEENS----FSLDVDF 321
>gi|340382685|ref|XP_003389849.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Amphimedon queenslandica]
Length = 389
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 259/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQ+ +IW+ YKKA ASFWT EEVDLS+DL+ WE L +E++F+ H
Sbjct: 70 EPLLEENPRRFVLFPIQHTEIWQFYKKAVASFWTVEEVDLSKDLQDWEKLKEEERYFIKH 129
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI D E
Sbjct: 130 VLAFFAASDGIVNENLVERFSSEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYISDKHE 189
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF+AIE +PCV KKA WA+NWI ++F ER+IAFA VEGIFFSGSF AIFWLKKR
Sbjct: 190 SDYLFNAIENMPCVKKKADWAINWIQSEDDSFGERVIAFAAVEGIFFSGSFAAIFWLKKR 249
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL+Y L K + ER+K ++ +AV IE+EF+ +ALP
Sbjct: 250 GLMPGLTFSNELISRDEGLHCDFACLMYKNLINKPTSERIKHIITDAVLIEQEFLTEALP 309
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM QYIEFVADRLL AL K+Y V+NPFD+ME ISL+GKTNFFEKRVG+Y
Sbjct: 310 CNLIGMNCVLMKQYIEFVADRLLVALDQPKVYNVSNPFDFMENISLEGKTNFFEKRVGDY 369
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK+ VMS HVF ++ +F
Sbjct: 370 QKSGVMS----KKTEHVFTLEAEF 389
>gi|55742360|ref|NP_001007164.1| ribonucleoside-diphosphate reductase subunit M2 B [Danio rerio]
Length = 349
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/328 (66%), Positives = 261/328 (79%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S+ +EPLL NP RF +FPIQYP IW+MYK+A+ASFWT EEVDLS+DL HW+ L ++EKH
Sbjct: 26 SVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLTHWDGLKSEEKH 85
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 86 FISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQILIENVHSEMYSMLINTYIR 145
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E++ LF+A++T+PCV +KA WAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 146 DLKERDYLFNAVQTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 205
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L K S +RV ++ +AV IE+EF+
Sbjct: 206 LKKRGLMPGLTYSNELISRDEGLHCNFACLIYSYLVKKPSVDRVNDIIAKAVSIEQEFLT 265
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADRLL LG K Y NPFD+ME ISL+GKTNFFEKR
Sbjct: 266 EALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKAYCSENPFDFMESISLEGKTNFFEKR 325
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
V EYQ+ VMS N + F +D DF
Sbjct: 326 VAEYQRLGVMS----NVKDCEFTLDADF 349
>gi|340059497|emb|CCC53882.1| putative ribonucleoside-diphosphate reductase small chain,
fragment, partial [Trypanosoma vivax Y486]
Length = 323
Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust.
Identities = 210/324 (64%), Positives = 263/324 (81%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL PNPDR+ +FPI+Y IW YK+AE+S WT EE+DLS DL W+ + +E+HF+ H
Sbjct: 4 EPLLLPNPDRYVIFPIKYHDIWRKYKEAESSIWTVEEIDLSNDLADWKKIDDNERHFIKH 63
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA RFM EVQ+ EAR FYGFQIAIEN+H+E YS+LL+TYI D DE
Sbjct: 64 VLAFFAASDGIVLENLAQRFMAEVQIPEARCFYGFQIAIENVHAETYSVLLDTYILDPDE 123
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN L AI T+P + KKA WA+ WI+ + +FAERL+AFA VEGIFFSGSFCA+FWLKKRG
Sbjct: 124 KNHLLRAIFTIPSIKKKAEWAIQWIESTASFAERLVAFAAVEGIFFSGSFCALFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH +FACLLY + +L++ERV+ ++ AV+IEREF+C+++P
Sbjct: 184 LMPGLTFSNELISRDEGLHTEFACLLYEKYIVNRLTDERVREIICGAVDIEREFICESIP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
++GMN +LM++YI+FVADRLL ALG+ ++Y V NPFD+ME+ISLQGKTNFFEK+VGEY
Sbjct: 244 VHMIGMNSDLMTKYIKFVADRLLVALGHERVYNVENPFDFMEMISLQGKTNFFEKKVGEY 303
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
Q+A VM++ F + EDF
Sbjct: 304 QRAGVMNA----DAPKAFSLSEDF 323
>gi|325181522|emb|CCA15972.1| ribonucleosidediphosphate reductase small chain put [Albugo
laibachii Nc14]
Length = 1611
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/318 (67%), Positives = 250/318 (78%), Gaps = 1/318 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP L NP+RF +FPIQ +IW+MYKKAEASFWTAEE+DL D+ W ++ +E+HF+ H
Sbjct: 70 EPFLRENPNRFVLFPIQQSEIWDMYKKAEASFWTAEEIDLVHDMNDWLNISDNERHFIKH 129
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F +EVQ+ EAR FYGFQIAIENIHSE+YSLL++TYIKD E
Sbjct: 130 VLAFFAASDGIVNENLAMNFSSEVQIPEARCFYGFQIAIENIHSEVYSLLIDTYIKDPTE 189
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K L AIET+PCV KA WAL W D +FAER++AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 190 KQHLLCAIETIPCVTNKAQWALKWCDPKCASFAERVVAFAAVEGIFFSGSFCSIFWLKKR 249
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLHCDFACL+YS L KL E + A++ +AV IE+EFV D+LP
Sbjct: 250 GLMPGLCFSNELISRDEGLHCDFACLMYSKLVNKLPEASIHAIISDAVVIEQEFVRDSLP 309
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRLL ALG KLY +NPFDWM++ISLQGKTNFFEKRVGEY
Sbjct: 310 VELIGMNSSLMGQYIEFVADRLLHALGVSKLYHTSNPFDWMDMISLQGKTNFFEKRVGEY 369
Query: 306 QKASVMSSLNGNGGNHVF 323
K+ + GG VF
Sbjct: 370 AKSGTILGAIVLGGVVVF 387
>gi|296227440|ref|XP_002759377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
isoform 1 [Callithrix jacchus]
Length = 351
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K + NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKFFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|327298815|ref|XP_003234101.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
CBS 118892]
gi|326464279|gb|EGD89732.1| ribonucleotide reductase small subunit RnrA [Trichophyton rubrum
CBS 118892]
Length = 408
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 222/335 (66%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+D+ W L DE+ F+
Sbjct: 76 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D + TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFAQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+A++ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAVTIEQEFLTDA 315
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTKKEEDSSEEPENGG--AFRFDEDF 408
>gi|340726315|ref|XP_003401505.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
isoform 2 [Bombus terrestris]
Length = 366
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/309 (70%), Positives = 256/309 (82%), Gaps = 2/309 (0%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
PE EPLL NP RF +FPIQ+P IW+MYKKAEASFWT EEVDLS+D+ W L +DEKHF
Sbjct: 44 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDIFDWNHLNSDEKHF 103
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIEN+HSEMYS+L++TYI D
Sbjct: 104 ISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITD 163
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E++ LF+AIE +PCVAKKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 164 TKERDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 223
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S +RV +++K+AV+IE+EF+ D
Sbjct: 224 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTD 283
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 284 ALPVQMIGMNCTLMCQYIEFVADRLLTELGCEKIYMSENPFDFMEHISLEGKTNFFEKKV 343
Query: 303 GEYQKASVM 311
GEYQK VM
Sbjct: 344 GEYQKWGVM 352
>gi|110763195|ref|XP_397443.3| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 isoform
1 [Apis mellifera]
Length = 384
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/310 (70%), Positives = 257/310 (82%), Gaps = 2/310 (0%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
PE EPLL NP RF +FPIQ+P IW+MYKKAEASFWT EEVDLS+D+ W LTA EKHF
Sbjct: 62 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNNLTASEKHF 121
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQ+A+EN+HSEMYSLL++TYI D
Sbjct: 122 ISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIAD 181
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E++ LF+AIE +PCVAKKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 182 AKERDFLFNAIENLPCVAKKAHWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 241
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S ERV +++K+AV+IE+EF+ D
Sbjct: 242 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCERVTSIIKDAVKIEQEFLTD 301
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN +LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 302 ALPVEMIGMNCKLMCQYIEFVADRLLVELGCKKIYMSENPFDFMEHISLEGKTNFFEKKV 361
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 362 GEYQKWGVMQ 371
>gi|225320685|dbj|BAH29738.1| ribonucleoside-diphosphate reductase subunit M2 [Dicyema japonicum]
Length = 337
Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 258/325 (79%), Gaps = 2/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF +FPI+YP I+ MYK+A AS WT EEVDLS+D++HW L +DEK F++
Sbjct: 14 QEPLLVSNPRRFVLFPIEYPDIFTMYKQALASIWTVEEVDLSKDIKHWNILNSDEKRFIS 73
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV+EAR+FYG QIA+ENIHSEMYSLL++TYI D
Sbjct: 74 HVLAFFAASDGIVNENLVQRFSVEVQVSEARSFYGLQIAVENIHSEMYSLLIDTYISDFQ 133
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+++F AIET+P V KKA WA+ WI+ +E+ F+ERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 134 EKDKMFSAIETMPFVKKKADWAIRWIESTESHFSERLVAFAAVEGIFFSGSFASIFWLKK 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RG+MPGLT+SNELISRDEGLH DFACLLY L+ KL +R+ ++ EAV +E+EF+ +AL
Sbjct: 194 RGVMPGLTYSNELISRDEGLHTDFACLLYHHLKKKLPRDRILQIITEAVVLEKEFLTEAL 253
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LMSQYIEFVADRL+ LGY K Y NPFD+ME ISL GKTNFFEKRVGE
Sbjct: 254 PVALIGMNVNLMSQYIEFVADRLIIELGYDKHYYAQNPFDFMENISLSGKTNFFEKRVGE 313
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VM +H+F D DF
Sbjct: 314 YQRMGVMGK-AVESDSHIFTTDVDF 337
>gi|194036959|ref|XP_001925036.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 1 [Sus scrofa]
Length = 351
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 258/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNRLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 QREFLFNAIETMPYVKKKADWALRWIADRKATFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE RV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEARVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|336373646|gb|EGO01984.1| hypothetical protein SERLA73DRAFT_104202 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386462|gb|EGO27608.1| hypothetical protein SERLADRAFT_354853 [Serpula lacrymans var.
lacrymans S7.9]
Length = 379
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 261/329 (79%), Gaps = 5/329 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EEPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+D+ W L +E+HF+
Sbjct: 51 EEPLLKDSKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDVHDWANRLNDNERHFI 110
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 111 SHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 170
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+ LF A+ET+PCV +KA WAL WI D TFAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 171 SEREYLFDAVETIPCVKRKADWALTWISDNRSTFAERLVAFAAVEGIFFSGSFASIFWLK 230
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + + V+ ++ EAV IE++F+ DA
Sbjct: 231 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDVVRRIITEAVVIEQDFLTDA 290
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL +LG K+Y V NPFD+M++ISLQGKTNFFEKRV
Sbjct: 291 LPCALIGMNSKLMRQYIEFVADRLLVSLGNDKVYNVTNPFDFMDMISLQGKTNFFEKRVS 350
Query: 304 EYQKASV---MSSLNGNGGNHVFKIDEDF 329
+Y KA+V +S + + F +DEDF
Sbjct: 351 DYTKANVNHNNASQQESTTSKTFSLDEDF 379
>gi|85109237|ref|XP_962820.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
OR74A]
gi|30316285|sp|Q9C167.2|RIR2_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|16273691|gb|AAK14804.2| small subunit of ribonucleotide reductase [Neurospora crassa]
gi|28924456|gb|EAA33584.1| ribonucleoside-diphosphate reductase M2 subunit [Neurospora crassa
OR74A]
Length = 410
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/341 (65%), Positives = 265/341 (77%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 72 PEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 131
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 132 KFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 191
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AI+T+PC+ KKA WAL WI D S TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 192 IKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASI 251
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ ++ ++ +AV IE+EF
Sbjct: 252 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQEF 311
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 312 LTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFFE 371
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKIDEDF 329
KRVG+YQKA VM+S N NGG+ F DEDF
Sbjct: 372 KRVGDYQKAGVMNSTKKADADAEVAKNENGGDFTF--DEDF 410
>gi|340522213|gb|EGR52446.1| predicted protein [Trichoderma reesei QM6a]
Length = 417
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/342 (63%), Positives = 268/342 (78%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EP+L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 78 PEEIDEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 137
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K+F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 138 KYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 197
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++N LF+AIET+PC+ KKA WA+ WI D + +FA+RL+AFA VEGIFFSG+F +I
Sbjct: 198 IKEHSQRNYLFNAIETIPCIRKKADWAIRWIQDKNSSFAQRLVAFAAVEGIFFSGAFASI 257
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S+E ++ ++ +AV IE+EF
Sbjct: 258 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKEVIRDIITDAVRIEQEF 317
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKTNFFE
Sbjct: 318 LTEALPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKSSNPFDFMENISLGGKTNFFE 377
Query: 300 KRVGEYQKASVMSSL------------NGNGGNHVFKIDEDF 329
KRV +YQKA VM+S + NGG+ F D+DF
Sbjct: 378 KRVADYQKAGVMNSTKKVVDDSSADAKDSNGGD--FSFDDDF 417
>gi|194474072|ref|NP_001124015.1| ribonucleoside-diphosphate reductase subunit M2 B [Rattus
norvegicus]
gi|149066498|gb|EDM16371.1| ribonucleotide reductase M2 B (TP53 inducible) (predicted) [Rattus
norvegicus]
Length = 351
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ++EK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVMEIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLLG LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|336469285|gb|EGO57447.1| small subunit of ribonucleotide reductase [Neurospora tetrasperma
FGSC 2508]
gi|350291081|gb|EGZ72295.1| small subunit of ribonucleotide reductase [Neurospora tetrasperma
FGSC 2509]
Length = 410
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/341 (65%), Positives = 265/341 (77%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 72 PEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 131
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 132 KFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 191
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AI+T+PC+ KKA WAL WI D S TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 192 IKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASI 251
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ ++ ++ +AV IE+EF
Sbjct: 252 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQEF 311
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 312 LTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFFE 371
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKIDEDF 329
KRVG+YQKA VM+S N NGG+ F DEDF
Sbjct: 372 KRVGDYQKAGVMNSTKKVDADAEVVKNENGGDFTF--DEDF 410
>gi|326472581|gb|EGD96590.1| ribonucleotide reductase small subunit RnrA [Trichophyton tonsurans
CBS 112818]
Length = 408
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/335 (65%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+D+ W L DE+ F+
Sbjct: 76 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D + TF++RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFSQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+A++ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPNAVEAIITEAVTIEQEFLTDA 315
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTKKEEDSSEEPENGG--AFRFDEDF 408
>gi|302665732|ref|XP_003024474.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
gi|291188529|gb|EFE43863.1| hypothetical protein TRV_01368 [Trichophyton verrucosum HKI 0517]
Length = 529
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/335 (66%), Positives = 259/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+D+ W L DE+ F+
Sbjct: 197 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 256
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 257 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 316
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 317 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 376
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+A++ EAV IE+EF+ DA
Sbjct: 377 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPSAVEAIITEAVTIEQEFLTDA 436
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 437 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 496
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 497 DYQKAGVMASTKKEEDSSEEPENGG--AFRFDEDF 529
>gi|171687074|ref|XP_001908478.1| hypothetical protein [Podospora anserina S mat+]
gi|170943498|emb|CAP69151.1| unnamed protein product [Podospora anserina S mat+]
Length = 409
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/337 (65%), Positives = 264/337 (78%), Gaps = 15/337 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
+EPLL NP RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+DL W L DEK F+
Sbjct: 75 DEPLLTENPQRFVLFPIKYHEVWQMYKKAEASFWTAEEIDLSKDLHDWSNKLNDDEKFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 135 SHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WAL WI D +FA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 195 SQRTYLFNAIDTIPCIRKKADWALRWISDKDASFAQRLVAFAAVEGIFFSGAFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++++AV IE+EF+ +A
Sbjct: 255 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLVEDIIRDAVTIEQEFLTEA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRVG
Sbjct: 315 LPCALLGMNSNLMKQYIEFVADRLLVALGNDKIYRSTNPFDFMENISLGGKTNFFEKRVG 374
Query: 304 EYQKASVMSSL-----------NGNGGNHVFKIDEDF 329
EYQKA VM+S N NGG+ F DEDF
Sbjct: 375 EYQKAGVMNSTKKFEESAEESKNENGGDFAF--DEDF 409
>gi|79160106|gb|AAI08038.1| Rrm2b protein [Danio rerio]
Length = 349
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 261/328 (79%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S+ +EPLL NP RF +FPIQYP IW+MYK+A+ASFWT EEVDLS+DL HW+ L ++EKH
Sbjct: 26 SVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLTHWDGLKSEEKH 85
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 86 FISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQILIENVHSEMYSMLINTYIR 145
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E++ LF+A++T+PCV +KA WAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 146 DLKERDYLFNAVQTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 205
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LK+RGLMPGLT+SNELISRDEGLHC+FACL+YS L K S +RV ++ +AV IE+EF+
Sbjct: 206 LKRRGLMPGLTYSNELISRDEGLHCNFACLMYSYLVKKPSVDRVNDIIAKAVSIEQEFLT 265
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADRLL LG K Y NPFD+ME ISL+GKTNFFEKR
Sbjct: 266 EALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKAYCSENPFDFMESISLEGKTNFFEKR 325
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
V EYQ+ VMS N + F +D DF
Sbjct: 326 VAEYQRLGVMS----NVKDCEFTLDADF 349
>gi|392969753|ref|ZP_10335168.1| Ribonucleoside-diphosphate reductase [Fibrisoma limi BUZ 3]
gi|387841947|emb|CCH57226.1| Ribonucleoside-diphosphate reductase [Fibrisoma limi BUZ 3]
Length = 330
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/324 (66%), Positives = 265/324 (81%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L + RF +FPI++ IW+MYKK EASFWTAEE+DLSQDL+ W+ L E+HF++H
Sbjct: 8 EPILEEDKGRFVLFPIKHNDIWQMYKKHEASFWTAEEIDLSQDLKDWDNLNDGERHFISH 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F++EVQ AEA+ FYGFQ+ +ENIHSE YSLL++TYIKD E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQVMMENIHSETYSLLIDTYIKDPVE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+R+ +AI+T+PCV KKA WAL WI+ +FAERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 128 KDRMLNAIDTIPCVQKKAEWALRWIENG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKRG 186
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGL+FSNELISRDEGLH DFACLLY+ ++ K+ EE + +V++AV IE+EFV DALP
Sbjct: 187 LMPGLSFSNELISRDEGLHRDFACLLYTDHIKNKMPEEEIYQIVRDAVTIEQEFVSDALP 246
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN +LM QYI FVAD LL +LG +Y V+NPFD+M++ISLQGKTNFFEKRVGEY
Sbjct: 247 VSLIGMNADLMKQYIAFVADHLLVSLGLRAIYNVSNPFDFMDMISLQGKTNFFEKRVGEY 306
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM+S++ F ++EDF
Sbjct: 307 QKAGVMASVDKERETAKFSMEEDF 330
>gi|261189551|ref|XP_002621186.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis SLH14081]
gi|239591422|gb|EEQ74003.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis SLH14081]
gi|239613047|gb|EEQ90034.1| ribonucleotide reductase small subunit RnrA [Ajellomyces
dermatitidis ER-3]
gi|327356917|gb|EGE85774.1| ribonucleotide reductase M2 B [Ajellomyces dermatitidis ATCC 18188]
Length = 413
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/338 (65%), Positives = 264/338 (78%), Gaps = 16/338 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL NP+RF +FP++Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F+
Sbjct: 78 EEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFI 137
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF +EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 138 SHVLAFFAASDGIVNENLVERFSSEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 197
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI+ E+ FA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 198 KQRTYLFDAIDTIPCIRKKADWAIRWIEDKESSFAQRLVAFAAVEGIFFSGSFASIFWLK 257
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR + S E V+ ++ EAV IE+EF+ DA
Sbjct: 258 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPSPEAVERIITEAVTIEQEFLSDA 317
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 318 LPVALLGMNAKLMCQYIEFVADRLLVALGNKKVYNSTNPFDFMDNISLAGKTNFFEKRVG 377
Query: 304 EYQKASVMSSLNG------------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F DEDF
Sbjct: 378 DYQKAGVMASTKKEAATEETEKQIENGG--AFTFDEDF 413
>gi|156058956|ref|XP_001595401.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980]
gi|154701277|gb|EDO01016.1| hypothetical protein SS1G_03490 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 407
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/344 (64%), Positives = 266/344 (77%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP+RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 66 PEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 125
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 126 RYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 185
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ +K LF+AI+T+PC+ KKA WA+ WI D + TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 186 IKEQAQKTYLFNAIDTIPCIKKKADWAVKWIQDKNSTFAQRLVAFAAVEGIFFSGSFASI 245
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L+ + S++ V+ ++ EAVEIE+EF
Sbjct: 246 FWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLKHRPSKQAVQDVITEAVEIEQEF 305
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL LG K+Y ANPFD+ME ISL GKTNFFE
Sbjct: 306 LTEALPCALLGMNSTLMKQYIEFVADRLLVTLGNDKVYKSANPFDFMENISLAGKTNFFE 365
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKIDEDF 329
KRVG+YQKA VM+ NGG+ F DEDF
Sbjct: 366 KRVGDYQKAGVMAGTQKKHEDTEAQTEAKAENGGD--FNFDEDF 407
>gi|426235770|ref|XP_004011853.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Ovis
aries]
Length = 351
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ++EK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|336271379|ref|XP_003350448.1| hypothetical protein SMAC_02161 [Sordaria macrospora k-hell]
gi|380090970|emb|CCC11503.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 410
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/341 (65%), Positives = 265/341 (77%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W LT DE
Sbjct: 72 PEEAAEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTDDE 131
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ FV+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 132 RFFVSHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 191
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AI+T+PC+ KKA WAL WI D S TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 192 IKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASI 251
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ ++ ++ +AV IE+EF
Sbjct: 252 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQDIIVDAVRIEQEF 311
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 312 LTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKVYRSTNPFDFMENISLGGKTNFFE 371
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKIDEDF 329
KRV +YQKA VM+S N NGG+ F DEDF
Sbjct: 372 KRVADYQKAGVMNSTKKVDPDAEVVKNENGGDFTF--DEDF 410
>gi|358374795|dbj|GAA91384.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
kawachii IFO 4308]
Length = 396
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/342 (66%), Positives = 264/342 (77%), Gaps = 18/342 (5%)
Query: 2 PSIPE----EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-AL 56
P I E EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L
Sbjct: 59 PGIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRL 118
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
DE++F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL
Sbjct: 119 NDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLL 178
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK+ ++ LF AI+T+PC+AKKA WA+ WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 179 IDTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQDRESTFAQRLVAFAAVEGIFFSGS 238
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++ EAV I
Sbjct: 239 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVGI 298
Query: 236 EREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKT 295
E+EF+ DALPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKT
Sbjct: 299 EQEFLTDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNATNPFDFMESISLAGKT 358
Query: 296 NFFEKRVGEYQKASVMSS--------LNGNGGNHVFKIDEDF 329
NFFEKRVG+YQKA VM+S NGNG DEDF
Sbjct: 359 NFFEKRVGDYQKAGVMASTKKEEEPKTNGNG----LSFDEDF 396
>gi|330921941|ref|XP_003299625.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
gi|311326599|gb|EFQ92269.1| hypothetical protein PTT_10664 [Pyrenophora teres f. teres 0-1]
Length = 410
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/314 (68%), Positives = 256/314 (81%), Gaps = 2/314 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P +EPLL NP RF +FPI+Y +W+MYKKAEASFWTAEE+DLS+DL W + L DE
Sbjct: 67 PEEADEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDE 126
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F++HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI +EN+HSE YSLL++TY
Sbjct: 127 RFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDTY 186
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
I + ++ LF+AI+ +PC+ KKA WAL WI D + TFA RL+AFA VEGIFFSGSF +I
Sbjct: 187 ISEPRQRKYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASI 246
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL + S+E V+A++ EAVEIE+EF
Sbjct: 247 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNNRPSKESVRAIITEAVEIEQEF 306
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 307 LSDALPCALLGMNATLMCQYIEFVADRLLLALGNTKVYNATNPFDFMENISLAGKTNFFE 366
Query: 300 KRVGEYQKASVMSS 313
KRVG+YQKA VM+S
Sbjct: 367 KRVGDYQKAGVMAS 380
>gi|156387377|ref|XP_001634180.1| predicted protein [Nematostella vectensis]
gi|156221260|gb|EDO42117.1| predicted protein [Nematostella vectensis]
Length = 341
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 257/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF + PIQYP+IW+MYKKAEASFWTAEEVDLS+D + L DE+ FV+
Sbjct: 21 DEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDDERMFVS 80
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL F EVQ+ EAR FYGFQIAIENIHSEMYSLL+E+ IKD
Sbjct: 81 HVLAFFAASDGIVNENLVECFSQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDKA 140
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK LF+AIET+PCV KKA WALNWI+ +F ER+IAFA VEGIFFSGSF AIFWLKK
Sbjct: 141 EKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLKK 200
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL+Y L K EE V+ ++K+AV IE+EF+ AL
Sbjct: 201 RGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSAL 260
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL AL K+Y V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 261 PVKLIGMNCALMRQYIEFVADRLLVALNCQKVYNVENPFDFMENISLEGKTNFFEKRVGE 320
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VMS + H F ++E+F
Sbjct: 321 YQKSGVMSEKDS----HKFSLEEEF 341
>gi|417409802|gb|JAA51392.1| Putative ribonucleotide reductase beta subunit, partial [Desmodus
rotundus]
Length = 336
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/325 (66%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 16 EEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 76 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 136 KREFLFNAIETMPYVKKKADWALRWIADRQSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 195
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ +AVEIE+EF+ +AL
Sbjct: 196 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEKRVREIIVDAVEIEQEFLTEAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 256 PVGLIGMNCVLMKQYIEFVADRLFVELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 316 YQRFAVMTETTDN----VFTLDADF 336
>gi|395217260|ref|ZP_10401555.1| ribonucleoside-diphosphate reductase [Pontibacter sp. BAB1700]
gi|394455057|gb|EJF09607.1| ribonucleoside-diphosphate reductase [Pontibacter sp. BAB1700]
Length = 295
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/300 (73%), Positives = 249/300 (83%), Gaps = 5/300 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWTAEE+DLSQD + WE L E+HF++HVLAFFAASDGIV ENLA FM E
Sbjct: 1 MYKKAEASFWTAEEIDLSQDQKDWENLNDGERHFISHVLAFFAASDGIVNENLAINFMQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQ+ EAR FYGFQI +ENIHSE YSLL++TYIK EK+ LF+A+ETVPCV KK WAL
Sbjct: 61 VQLPEARCFYGFQIMMENIHSETYSLLIDTYIKKQSEKDYLFNALETVPCVKKKGEWALK 120
Query: 150 WIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 209
WI+ SE F ERLIAFA VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFA
Sbjct: 121 WIN-SEKFVERLIAFAAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 179
Query: 210 CLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLG 269
CLLYS+L KL E RV ++++AVEIE+EFV DALP L+GMN +LMSQYIEFVADRLL
Sbjct: 180 CLLYSMLNNKLPESRVHEIIRDAVEIEQEFVTDALPVDLIGMNAKLMSQYIEFVADRLLV 239
Query: 270 ALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+LG K+Y NPFD+ME+ISLQGKTNFFEKRVGEYQKA VM G+ +VF +DEDF
Sbjct: 240 SLGCSKIYNATNPFDFMEMISLQGKTNFFEKRVGEYQKAGVM----GDKDKNVFSLDEDF 295
>gi|225561749|gb|EEH10029.1| ribonucleotide reductase M2 B [Ajellomyces capsulatus G186AR]
gi|240275354|gb|EER38868.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
capsulatus H143]
gi|325091193|gb|EGC44503.1| ribonucleoside-diphosphate reductase subunit small [Ajellomyces
capsulatus H88]
Length = 413
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/338 (65%), Positives = 262/338 (77%), Gaps = 16/338 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP+RF +FP++Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F+
Sbjct: 78 DEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFI 137
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 138 SHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 197
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AIET+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 198 KQRTYLFDAIETIPCIRKKADWAIRWIEDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 257
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S LR + S E V+ ++ EAV IE+EF+ DA
Sbjct: 258 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLRHRPSPEAVEKIITEAVTIEQEFLSDA 317
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 318 LPVALLGMNAKLMCQYIEFVADRLLVALGNKKVYNSTNPFDFMDNISLAGKTNFFEKRVG 377
Query: 304 EYQKASVMSSLNG------------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F DEDF
Sbjct: 378 DYQKAGVMASTKKEAATDETEKQIENGG--AFNFDEDF 413
>gi|262263187|dbj|BAI48096.1| ribonucleotide reductase M2 [Sus scrofa]
Length = 355
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/306 (70%), Positives = 255/306 (83%), Gaps = 1/306 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE L +E+
Sbjct: 48 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEER 107
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 108 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 167
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 168 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 227
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 228 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 287
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+GK++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 288 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 347
Query: 301 RVGEYQ 306
RVGE +
Sbjct: 348 RVGEIR 353
>gi|7023557|dbj|BAA92005.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+G+N LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGVNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>gi|332876813|ref|ZP_08444570.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|332685239|gb|EGJ58079.1| ribonucleoside-diphosphate reductase, beta subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
Length = 324
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 257/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL N DRF +FPIQ+ IW+ YK AEASFWTAEEVDLS DL W+ L +E+ F++
Sbjct: 4 EPLLQDNKDRFVIFPIQHNDIWQFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 63
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENLA F+ EVQ EAR FYGFQI IENIHSEMYSLL++TY+KD
Sbjct: 64 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPA 123
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ L AIET+PCV KKA WAL WI +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 124 EKDYLLRAIETIPCVTKKAKWALRWITKG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 182
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY + L+ KLSEE ++ ++ +AV IE+EFV DAL
Sbjct: 183 GLMPGLTFSNELISRDEGLHCDFACLLYVNHLQNKLSEETIREIIVDAVAIEKEFVTDAL 242
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM QYIEFVADRLL ALG K++ NPFD+MELISLQGKTNFFE+RVGE
Sbjct: 243 PVKLIGMNAELMCQYIEFVADRLLVALGCNKVWNATNPFDFMELISLQGKTNFFERRVGE 302
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK V + N + F +DEDF
Sbjct: 303 YQKTGVAQT---NSEQNTFSLDEDF 324
>gi|417399461|gb|JAA46734.1| Putative ribonucleotide reductase beta subunit [Desmodus rotundus]
Length = 351
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/325 (66%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLKKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRQSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ +AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEKRVREIIVDAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLFVELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMTETTDN----VFTLDADF 351
>gi|345326583|ref|XP_001508783.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Ornithorhynchus anatinus]
Length = 367
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 261/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP+IW+MYK+A+ASFWTAEEVDLS+DL HW L ++EK+F++
Sbjct: 47 EEPLLRKSSRRFVIFPIQYPEIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 106
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYIKD
Sbjct: 107 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIKDPK 166
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA W+L WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 167 KREFLFNAIETMPFVKKKADWSLRWIADRQSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 226
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE++VK ++ +AVEIE+EF+ +AL
Sbjct: 227 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVKKPSEDKVKEIIIDAVEIEQEFLTEAL 286
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 287 PVGLIGMNCTLMKQYIEFVADRLLVELGFSKVFHSDNPFDFMENISLEGKTNFFEKRVSE 346
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VMS N VF +D DF
Sbjct: 347 YQRFAVMSETTDN----VFTLDADF 367
>gi|301774462|ref|XP_002922647.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Ailuropoda melanoleuca]
Length = 387
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 67 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 126
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 127 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 186
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 187 KREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 246
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 247 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 306
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 307 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 366
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 367 YQRFAVMAETTDN----VFTLDADF 387
>gi|423315654|ref|ZP_17293559.1| ribonucleoside-diphosphate reductase subunit M2 [Bergeyella
zoohelcum ATCC 43767]
gi|405585758|gb|EKB59561.1| ribonucleoside-diphosphate reductase subunit M2 [Bergeyella
zoohelcum ATCC 43767]
Length = 329
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 227/325 (69%), Positives = 257/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL N DRF +FPIQ+ IW+ YK AEASFWTAEEVDLS DL W+ L +E+ F++
Sbjct: 9 EPLLIENKDRFVIFPIQHNDIWQFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 68
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENLA F+ EVQ EAR FYGFQI IENIHSEMYSLL++TY+KD
Sbjct: 69 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPI 128
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ L AIET+PCV KKA WAL WI +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDYLLRAIETIPCVTKKAKWALRWITKG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY+ L+ KLSEE VK ++ +AV IE+EFV DAL
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLYANHLQNKLSEETVKEIIVDAVAIEKEFVTDAL 247
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM QYIEFVADRLL ALG K++ NPFD+MELISLQGKTNFFE+RVGE
Sbjct: 248 PVKLIGMNAELMCQYIEFVADRLLVALGCNKVWNATNPFDFMELISLQGKTNFFERRVGE 307
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK V S + + F +DEDF
Sbjct: 308 YQKTGVAQS---SSEQNAFSLDEDF 329
>gi|157869457|ref|XP_001683280.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
gi|68224164|emb|CAJ04657.1| putative ribonucleoside-diphosphate reductase small chain
[Leishmania major strain Friedlin]
Length = 392
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W L E+HF+
Sbjct: 71 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 131 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA WA+ WI S +F ERLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 191 EKLRLLHAIQTIPCIQKKAEWAVRWIGSSASFQERLIGFAAVEGIFFSGSFCALFWLKKR 250
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 251 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PF++ME+ISLQGKTNFFE++VGE
Sbjct: 311 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYHSTQPFEFMEMISLQGKTNFFERKVGE 370
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 371 YQKAGVMST---EGTSKKFSLSEDF 392
>gi|350423884|ref|XP_003493620.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Bombus impatiens]
Length = 384
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 218/310 (70%), Positives = 256/310 (82%), Gaps = 2/310 (0%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
PE EPLL NP RF +FPIQ+P IW+MYKKAEASFWT EEVDLS+D+ W LT+DEKHF
Sbjct: 62 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNHLTSDEKHF 121
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQ+AIEN+HSEMYS+L++TYI D
Sbjct: 122 ISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVAIENVHSEMYSMLIDTYITD 181
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
E++ LF+AIE +PCVAKKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 182 IKERDFLFNAIENLPCVAKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 241
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S +RV +++K+AV+IE+EF+ +
Sbjct: 242 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCDRVTSIIKDAVKIEQEFLTE 301
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 302 ALPVQMIGMNCTLMCQYIEFVADRLLTELGCEKIYMSENPFDFMEHISLEGKTNFFEKKV 361
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 362 GEYQKWGVMQ 371
>gi|195485577|ref|XP_002091148.1| GE13485 [Drosophila yakuba]
gi|194177249|gb|EDW90860.1| GE13485 [Drosophila yakuba]
Length = 393
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 260/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D ++ LF+AIET+P V +KA WAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ ++++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN +LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQ+ V+S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVVS----NPLDNVFTLDADF 393
>gi|195436539|ref|XP_002066225.1| GK22247 [Drosophila willistoni]
gi|194162310|gb|EDW77211.1| GK22247 [Drosophila willistoni]
Length = 395
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/329 (65%), Positives = 262/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W LT +E+
Sbjct: 73 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNER 130
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 131 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSILIDTYI 190
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D E++ LF+A+ET+P V +KA WAL+WI + F ER+IAFA VEGIFFSGSF +IF
Sbjct: 191 RDPQERDYLFNAVETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIF 250
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNE+ISRDEGLHCDFA L++ L + S ER+ ++++AV+IE+EF+
Sbjct: 251 WLKKRGLMPGLTFSNEMISRDEGLHCDFAVLMFQHLVQRPSRERIIEIIRDAVQIEQEFL 310
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
ALP L+GMN +LMSQYIEFVADRLL LG GK+Y NPF +ME+ISL GKTNFFEK
Sbjct: 311 TVALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFSFMEMISLDGKTNFFEK 370
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQ+ V+ GN ++VF +D DF
Sbjct: 371 KVGEYQRMGVV----GNRLDNVFTLDADF 395
>gi|396476250|ref|XP_003839975.1| similar to ribonucleoside-diphosphate reductase subunit M2
[Leptosphaeria maculans JN3]
gi|312216546|emb|CBX96496.1| similar to ribonucleoside-diphosphate reductase subunit M2
[Leptosphaeria maculans JN3]
Length = 410
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/321 (67%), Positives = 256/321 (79%), Gaps = 2/321 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P EPLL NP RF +FPI+Y +W+MYKKAEASFWTAEE+DLS+DL W + L DE
Sbjct: 66 PEEAHEPLLQENPQRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDE 125
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +EN+HSE YSLL++TY
Sbjct: 126 RFFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENVHSETYSLLIDTY 185
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
I + ++ LF+AI+ +PC+ KKA WAL WI D + TFA RL+AFA VEGIFFSGSF +I
Sbjct: 186 ISEPRQRKYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASI 245
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL T+ S+E V+A++ EAVEIE+EF
Sbjct: 246 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVEIEKEF 305
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL +LG K Y NPFD+ME ISL GKTNFFE
Sbjct: 306 LSDALPCALLGMNATLMCQYIEFVADRLLLSLGNTKFYNATNPFDFMENISLAGKTNFFE 365
Query: 300 KRVGEYQKASVMSSLNGNGGN 320
KRVG+YQKA VM+S + N
Sbjct: 366 KRVGDYQKAGVMASTKKHEEN 386
>gi|18079279|ref|NP_525111.1| ribonucleoside diphosphate reductase small subunit [Drosophila
melanogaster]
gi|12644287|sp|P48592.2|RIR2_DROME RecName: Full=Ribonucleoside-diphosphate reductase subunit M2;
AltName: Full=Ribonucleotide reductase small subunit
gi|10727628|gb|AAF58599.2| ribonucleoside diphosphate reductase small subunit [Drosophila
melanogaster]
gi|15292183|gb|AAK93360.1| LD41588p [Drosophila melanogaster]
gi|220946286|gb|ACL85686.1| CG8975-PA [synthetic construct]
gi|220955972|gb|ACL90529.1| RnrS-PA [synthetic construct]
Length = 393
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 260/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D ++ LF+AIET+P V +KA WAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ ++++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN +LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQ+ V+S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVVS----NPLDNVFTLDADF 393
>gi|3914644|sp|O46310.1|RIR2_LEIAM RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase M2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|2828563|gb|AAC08302.1| ribonucleotide reductase M2 subunit [Leishmania amazonensis]
Length = 345
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 254/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W L E+HF+
Sbjct: 24 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 84 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 143
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA W + WI S +F +RLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 144 EKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKKR 203
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 204 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 263
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEKRVGE
Sbjct: 264 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGE 323
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 324 YQKAGVMST---EGTSKKFSLSEDF 345
>gi|156386903|ref|XP_001634150.1| predicted protein [Nematostella vectensis]
gi|156221230|gb|EDO42087.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 256/325 (78%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF + PIQYP+IW+MYKKAEASFWTAEEVDLS+D + L DE+ FV+
Sbjct: 64 DEPLLRENPHRFVILPIQYPEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDDERMFVS 123
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL F EVQ+ EAR FYGFQIAIENIHSEMYSLL+E+ IKD
Sbjct: 124 HVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDKA 183
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK LF+AIET+PCV KKA WALNWI+ +F ER+IAFA VEGIFFSGSF AIFWLKK
Sbjct: 184 EKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLKK 243
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL+Y L K EE V+ ++K+AV IE+EF+ AL
Sbjct: 244 RGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSAL 303
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL AL K+Y V NPFD+ME ISL+GKTNF+EKRVGE
Sbjct: 304 PVKLIGMNCALMRQYIEFVADRLLVALNCQKVYNVENPFDFMENISLEGKTNFYEKRVGE 363
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VMS + H F + ++F
Sbjct: 364 YQKSGVMSEKDS----HKFSLKDEF 384
>gi|406867406|gb|EKD20444.1| ribonucleotide reductase small subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 414
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/344 (64%), Positives = 264/344 (76%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 73 PEEADEPLLRENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 132
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 133 RYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTY 192
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ +K LF+AI+T+PC+ KKA WA+ WI D + TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 193 IKEQSQKTYLFNAIDTIPCIKKKADWAVKWIEDKNSTFAQRLVAFAAVEGIFFSGSFASI 252
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++ EAVEIE+EF
Sbjct: 253 FWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLNHRPSKQAVQDVITEAVEIEQEF 312
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL +LG K Y ANPFD+ME ISL GKTNFFE
Sbjct: 313 LTEALPCALLGMNANLMKQYIEFVADRLLLSLGNEKFYKSANPFDFMENISLAGKTNFFE 372
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKIDEDF 329
KRVG+YQKA VM+ NGG+ F DEDF
Sbjct: 373 KRVGDYQKAGVMAGTQKKHEDTAAQTDAKAENGGD--FNFDEDF 414
>gi|451995294|gb|EMD87762.1| hypothetical protein COCHEDRAFT_1182649 [Cochliobolus
heterostrophus C5]
Length = 410
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/314 (68%), Positives = 256/314 (81%), Gaps = 2/314 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P EPLL NP RF +FPI+Y +W+MYKKAEASFWTAEE+DLS+DL W + L DE
Sbjct: 67 PEEAHEPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDE 126
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F++HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI +EN+HSE YSLL++TY
Sbjct: 127 RFFISHVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDTY 186
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
I + ++ LF+AI+ +PC+ KKA WAL WI D + TFA RL+AFA VEGIFFSGSF +I
Sbjct: 187 ISEPRQRQYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASI 246
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL T+ S+E V+A++ EAV IE+EF
Sbjct: 247 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVAIEQEF 306
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 307 LSDALPCALLGMNAKLMCQYIEFVADRLLLALGNTKVYHATNPFDFMENISLAGKTNFFE 366
Query: 300 KRVGEYQKASVMSS 313
KRVG+YQKA VM+S
Sbjct: 367 KRVGDYQKAGVMAS 380
>gi|367051116|ref|XP_003655937.1| hypothetical protein THITE_2069122 [Thielavia terrestris NRRL 8126]
gi|347003201|gb|AEO69601.1| hypothetical protein THITE_2069122 [Thielavia terrestris NRRL 8126]
Length = 415
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 220/342 (64%), Positives = 264/342 (77%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 76 PEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 135
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K+F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 136 KYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 195
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AI+T+PC+ KKA WAL WI D TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 196 IKEPAQRTHLFNAIDTIPCIRKKADWALRWIADKKSTFAQRLVAFAAVEGIFFSGAFASI 255
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ ++ ++ +AV IE+EF
Sbjct: 256 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNKRPSKQVIQDIIVDAVRIEQEF 315
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 316 LTEALPCALLGMNATLMKQYIEFVADRLLVALGNEKVYRSTNPFDFMENISLGGKTNFFE 375
Query: 300 KRVGEYQKASVMSSLNG------------NGGNHVFKIDEDF 329
KRVG+YQKA VM+S NGG+ F DEDF
Sbjct: 376 KRVGDYQKAGVMASTKKFVQEEAEEAKGENGGD--FSFDEDF 415
>gi|384251438|gb|EIE24916.1| hypothetical protein COCSUDRAFT_47007 [Coccomyxa subellipsoidea
C-169]
Length = 451
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/290 (73%), Positives = 246/290 (84%)
Query: 22 IQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLEN 81
++Y I+EMYKKA ASFWT EEVDLSQD+R WE L+ DE+HF+ HVLAFFAASDGIV+EN
Sbjct: 24 VRYRDIFEMYKKAVASFWTVEEVDLSQDIRDWEKLSDDERHFIMHVLAFFAASDGIVMEN 83
Query: 82 LAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVA 141
LA RFM+EVQ+ EARAFYGFQIAIEN+HSEMYSLLLE YI+D ++K+++ AI+TVPCVA
Sbjct: 84 LAVRFMSEVQIPEARAFYGFQIAIENVHSEMYSLLLEHYIRDVEQKDKMLRAIQTVPCVA 143
Query: 142 KKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 201
KKA WA WI +FAERL+ FACVEGI FSGSFCAIFWLKKR LMPGLTFSNEL+SRD
Sbjct: 144 KKAEWAQRWIGSGSSFAERLVGFACVEGIHFSGSFCAIFWLKKRLLMPGLTFSNELVSRD 203
Query: 202 EGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIE 261
EGLH DFACLLYSLL+ L + V +V+EAV++E EF C+AL CALVGMN +LM QYI
Sbjct: 204 EGLHTDFACLLYSLLQHPLDQAVVHRIVREAVDLEHEFCCEALSCALVGMNAQLMGQYIN 263
Query: 262 FVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
+VADRLL ALG KLY ANPFDWME+ISLQGKTNFFE+RVGEYQ+A VM
Sbjct: 264 YVADRLLVALGCDKLYHTANPFDWMEMISLQGKTNFFERRVGEYQRAGVM 313
>gi|382546360|ref|NP_001244266.1| ribonucleoside diphosphate reductase small subunit [Bombyx mori]
gi|380503816|dbj|BAL72672.1| ribonucleoside diphosphate reductase small subunit [Bombyx mori]
Length = 375
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 258/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF +FPIQYP IW+MYKKAEASFWT EEVDLS+DL WE L E+HF+
Sbjct: 55 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIK 114
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYSLL++TYI+D
Sbjct: 115 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPK 174
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF+A+ET+PCV KKA WAL WI + TF ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 175 ERDFLFNAVETLPCVKKKADWALQWIASKTATFGERIVAFAAVEGIFFSGSFASIFWLKK 234
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACL++ L K ++E V ++K+AV IE+EF+ DAL
Sbjct: 235 RGLMPGLTFSNELISRDEGLHTDFACLMFQHLVQKPTKECVLHIIKDAVVIEQEFLTDAL 294
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELMSQYIEFVADRLL L K Y NPFD+M LISL+GKTNFFEK+VGE
Sbjct: 295 PVRLLGMNCELMSQYIEFVADRLLVDLIGEKHYNTKNPFDFMNLISLEGKTNFFEKKVGE 354
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK VM+ N ++VF +D DF
Sbjct: 355 YQKCGVMA----NRLDNVFTLDADF 375
>gi|289177074|ref|NP_001165948.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 2 [Homo
sapiens]
Length = 423
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 103 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 162
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 163 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 222
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 223 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 282
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 283 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 342
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 343 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 402
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 403 YQRFAVMAETTDN----VFTLDADF 423
>gi|406672898|ref|ZP_11080123.1| ribonucleoside-diphosphate reductase small chain [Bergeyella
zoohelcum CCUG 30536]
gi|405587442|gb|EKB61170.1| ribonucleoside-diphosphate reductase small chain [Bergeyella
zoohelcum CCUG 30536]
Length = 329
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 225/325 (69%), Positives = 257/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL N DRF +FPIQ+ IW+ YK AEASFWTAEEVDLS DL W+ L +E+ F++
Sbjct: 9 EPLLIENKDRFVIFPIQHNDIWKFYKNAEASFWTAEEVDLSPDLHDWQNKLNDNERFFIS 68
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENLA F+ EVQ EAR FYGFQI IENIHSEMYSLL++TY+KD
Sbjct: 69 RVLAFFAASDGIVNENLAINFLQEVQYPEARCFYGFQIMIENIHSEMYSLLIDTYVKDPT 128
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ L AIET+PCV KKA WAL WI+ +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDYLLRAIETIPCVTKKAEWALRWIEKG-SFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACLLY+ L+ KL EE V+ ++ +AV IE+EFV DAL
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLYANHLKNKLPEETVREIIVDAVAIEKEFVTDAL 247
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM QYIEFVADRLL ALG K++ NPFD+MELISLQGKTNFFE+RVGE
Sbjct: 248 PVKLIGMNAELMCQYIEFVADRLLVALGCNKVWNATNPFDFMELISLQGKTNFFERRVGE 307
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK V + N + F +DEDF
Sbjct: 308 YQKTGVAQT---NSEQNAFSLDEDF 329
>gi|451851899|gb|EMD65197.1| hypothetical protein COCSADRAFT_181130 [Cochliobolus sativus
ND90Pr]
Length = 410
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/309 (69%), Positives = 255/309 (82%), Gaps = 2/309 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EPLL NP RF +FPI+Y +W+MYKKAEASFWTAEE+DLS+DL W + L DE+ F++
Sbjct: 72 EPLLQENPGRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFIS 131
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI +EN+HSE YSLL++TYI +
Sbjct: 132 HVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENVHSETYSLLIDTYISEPR 191
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AI+ +PC+ KKA WAL WI D + TFA RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 192 QRQYLFNAIDNIPCIRKKADWALRWISDKNSTFANRLVAFAAVEGIFFSGSFASIFWLKK 251
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEG+H DFACLL+SLL T+ S+E V+A++ EAV IE+EF+ DAL
Sbjct: 252 RGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKESVQAIITEAVAIEQEFLSDAL 311
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 312 PCALLGMNAKLMCQYIEFVADRLLLALGNTKVYHATNPFDFMENISLAGKTNFFEKRVGD 371
Query: 305 YQKASVMSS 313
YQKA VM+S
Sbjct: 372 YQKAGVMAS 380
>gi|110636874|ref|YP_677081.1| ribonucleoside-diphosphate reductase 1 subunit beta [Cytophaga
hutchinsonii ATCC 33406]
gi|110279555|gb|ABG57741.1| ribonucleoside-diphosphate reductase 1, beta subunit [Cytophaga
hutchinsonii ATCC 33406]
Length = 324
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/328 (66%), Positives = 259/328 (78%), Gaps = 6/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S+ EEPLL N +RF +FPI++ IW MYK+ EASFWTAEE+DLSQDL W L E+H
Sbjct: 2 SLLEEPLLKENKNRFVLFPIKHDDIWAMYKQEEASFWTAEEIDLSQDLIDWANLNDGERH 61
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENLA F+ +VQ+ EA+ FYGFQI +ENIHSE YSLL++TYIK
Sbjct: 62 FISHVLAFFAASDGIVNENLAVNFLEKVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIK 121
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D EK+RLF+AI+TVPCV KKA WAL +ID +F E +IAFA VEGIFFSGSFC++FWL
Sbjct: 122 DPKEKDRLFNAIDTVPCVKKKADWALRFIDNG-SFIENIIAFAAVEGIFFSGSFCSVFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVC 241
KKRGLMPGL+FSNELISRDEGLHCDFACLLY+ + KL ERV ++ EAVEIE+EFV
Sbjct: 181 KKRGLMPGLSFSNELISRDEGLHCDFACLLYTKYINNKLPAERVIQIILEAVEIEKEFVT 240
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
D+LP L+GMN LM QYIEFVADRLL ALG K + NPFD+ME+ISLQGKTNFFEKR
Sbjct: 241 DSLPVDLIGMNARLMQQYIEFVADRLLVALGVPKQFNATNPFDFMEMISLQGKTNFFEKR 300
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
V EYQK+ VM+ + F +DEDF
Sbjct: 301 VSEYQKSGVMAEKDSQK----FSLDEDF 324
>gi|340905392|gb|EGS17760.1| hypothetical protein CTHT_0071060 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 420
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 213/314 (67%), Positives = 258/314 (82%), Gaps = 2/314 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP+RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 75 PEEADEPLLQENPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 134
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 135 RYFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 194
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AIET+PC+ KKA WAL WI D TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 195 IKEPAQRQHLFNAIETIPCIKKKAEWALRWIADKKSTFAQRLVAFAAVEGIFFSGAFASI 254
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+ + ++ ++ ++ +AV+IE+EF
Sbjct: 255 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKHRPPKQVIQDIIVDAVKIEQEF 314
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFE
Sbjct: 315 LTEALPCALLGMNATLMKQYIEFVADRLLVALGNEKVYRVTNPFDFMENISLGGKTNFFE 374
Query: 300 KRVGEYQKASVMSS 313
KRVG+YQKA VM+S
Sbjct: 375 KRVGDYQKAGVMAS 388
>gi|195119943|ref|XP_002004488.1| GI19586 [Drosophila mojavensis]
gi|193909556|gb|EDW08423.1| GI19586 [Drosophila mojavensis]
Length = 393
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 259/329 (78%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W LT +E+
Sbjct: 71 PSL--EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D E++ LF+A+ET+P V +KA WAL+WI + F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPQERDYLFNAVETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA +++ L + S ER+ ++ +AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVMMFRHLVQRPSRERIIEIISDAVTIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMSQYIEFVADRLL LG GK+Y NPF +ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCALMSQYIEFVADRLLVELGVGKIYNTKNPFTFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQ+ V S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVTS----NRLDNVFTLDADF 393
>gi|302833193|ref|XP_002948160.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
nagariensis]
gi|300266380|gb|EFJ50567.1| hypothetical protein VOLCADRAFT_101784 [Volvox carteri f.
nagariensis]
Length = 354
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/335 (64%), Positives = 260/335 (77%), Gaps = 7/335 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
PS +E +L NP+RF +FPI+YP +WE YK+A ASFWT EEVD + DL ++ L +E
Sbjct: 20 PSELDEAVLRENPNRFTLFPIRYPDLWEFYKRAVASFWTVEEVDFTGDLYDFDHKLKEEE 79
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F+ +VLAFFAASDGIV+ENL+ RFM+EVQV EARAFYGFQIA+EN+HSEMYS+LL+ Y
Sbjct: 80 RRFIKYVLAFFAASDGIVMENLSARFMSEVQVPEARAFYGFQIAMENVHSEMYSVLLDHY 139
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
++D E+ +LF+AI+T+ V KKA WAL WI S +FAERL+AFACVEGI FSGSFCAIF
Sbjct: 140 VRDPAERRQLFNAIQTIATVGKKADWALRWISSSNSFAERLVAFACVEGIHFSGSFCAIF 199
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKR LMPGL+FSN LISRDEGLHCDFAC LY L+ +LS ERV +V EAV +E EF
Sbjct: 200 WLKKRLLMPGLSFSNCLISRDEGLHCDFACCLYGHLKNRLSRERVVKIVDEAVRLEDEFC 259
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+AL C L+GMN +LM QYI FVADRLL +LGY K Y NPFDWME+ISLQGK NFFE+
Sbjct: 260 TEALSCELLGMNADLMRQYIRFVADRLLVSLGYDKYYNTVNPFDWMEMISLQGKANFFER 319
Query: 301 RVGEYQKASVMSSLNGNG------GNHVFKIDEDF 329
RVGEYQ+A VM+ NG+ HVF+ D DF
Sbjct: 320 RVGEYQRACVMAGDNGSAEQARGSSEHVFRTDCDF 354
>gi|361127540|gb|EHK99507.1| putative Ribonucleoside-diphosphate reductase small chain [Glarea
lozoyensis 74030]
Length = 439
Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/344 (63%), Positives = 264/344 (76%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 98 PEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 157
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 158 RYFISHVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 217
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
+K+ ++ LF+AIET+PC+ KKA WA+ WI D + TFA+RL+AFA +EGIFFSGSF +I
Sbjct: 218 VKEQAQRTYLFNAIETIPCIKKKADWAVRWIQDKNSTFAQRLVAFAAIEGIFFSGSFASI 277
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEG+H DFACLL+S L + S++ V+ ++ EAVEIE+EF
Sbjct: 278 FWLKKRGLMAGLTFSNELISRDEGMHTDFACLLFSHLNHRPSKQAVQDVITEAVEIEQEF 337
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL +LG K Y ANPFD+ME ISL GKTNFFE
Sbjct: 338 LTEALPCALLGMNSNLMKQYIEFVADRLLVSLGNDKFYKTANPFDFMENISLAGKTNFFE 397
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKIDEDF 329
KRVG+YQKA VM+ NGG+ F DEDF
Sbjct: 398 KRVGDYQKAGVMAGTQKKHEDTEAQTDAKAENGGD--FNFDEDF 439
>gi|194883840|ref|XP_001976005.1| GG22616 [Drosophila erecta]
gi|190659192|gb|EDV56405.1| GG22616 [Drosophila erecta]
Length = 393
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 259/329 (78%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D +++ LF+AIET+P V +KA WAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPNQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ ++++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKHERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN +LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+V EYQ+ V S N ++VF +D DF
Sbjct: 369 KVAEYQRMGVAS----NRLDNVFTLDADF 393
>gi|432107625|gb|ELK32858.1| Ribonucleoside-diphosphate reductase subunit M2 B [Myotis davidii]
Length = 353
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ++EK+F++
Sbjct: 33 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWHKLKSEEKYFIS 92
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++
Sbjct: 93 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIREPK 152
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 153 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 212
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AVEIE+EF+ +AL
Sbjct: 213 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEKRVREIIVNAVEIEQEFLTEAL 272
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 273 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 332
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ ++VF +D DF
Sbjct: 333 YQRFAVMAE----NTDNVFTLDADF 353
>gi|409049897|gb|EKM59374.1| hypothetical protein PHACADRAFT_249824 [Phanerochaete carnosa
HHB-10118-sp]
Length = 416
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/334 (65%), Positives = 259/334 (77%), Gaps = 8/334 (2%)
Query: 4 IPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
+PE EPLL + RF +FPIQYP+IW+MYKKAEASFWTAEE+DLS+D+ W L E
Sbjct: 83 LPEHMEPLLMESKRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDIHDWTNRLNDKE 142
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 143 RYFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 202
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD ++ LF AIET+PC+ KKA WAL WI D +FAERL+AFA VEGIFFSGSF +I
Sbjct: 203 IKDPKQREHLFDAIETIPCIKKKADWALRWISDTKSSFAERLVAFAAVEGIFFSGSFASI 262
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E V+ +V EAV IE+EF
Sbjct: 263 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVRKIVAEAVAIEQEF 322
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALP AL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+M++ISLQGKTNFFE
Sbjct: 323 LTDALPVALIGMNAKLMCQYIEFVADRLLVALGDEKVYNATNPFDFMDMISLQGKTNFFE 382
Query: 300 KRVGEYQKASVMSSLNGN----GGNHVFKIDEDF 329
KRV +Y KA V +S + F +DEDF
Sbjct: 383 KRVSDYSKAGVNTSAQSTTSEVSSSKTFTLDEDF 416
>gi|315041979|ref|XP_003170366.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
gypseum CBS 118893]
gi|311345400|gb|EFR04603.1| ribonucleoside-diphosphate reductase small subunit [Arthroderma
gypseum CBS 118893]
Length = 408
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/335 (66%), Positives = 259/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+D+ W L DE+ F+
Sbjct: 76 EEPLLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+A++ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPEPSAVEAIITEAVTIEQEFLTDA 315
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 316 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 375
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 376 DYQKAGVMASTKKEEESTEEPENGG--AFRFDEDF 408
>gi|449017273|dbj|BAM80675.1| ribonucleoside-diphosphate reductase beta chain [Cyanidioschyzon
merolae strain 10D]
Length = 383
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/322 (66%), Positives = 261/322 (81%), Gaps = 7/322 (2%)
Query: 11 APNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLA 69
A DR+ +FPI++P+I+E YK+ ASFWTAEE+DL+ D+ HW LT E++FV+HVLA
Sbjct: 66 AEEADRYTLFPIKHPKIFEFYKRHVASFWTAEEIDLAADMDHWRNRLTEAERYFVSHVLA 125
Query: 70 FFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNR 129
FFAASDGIVLENLA RFM +V++ EAR FYGFQIA+ENIHSE YSLL++ Y+KD +E+
Sbjct: 126 FFAASDGIVLENLAERFMRDVEIPEARCFYGFQIAMENIHSETYSLLIDAYVKDPEERTH 185
Query: 130 LFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMP 189
LF A+ET+PCV +KA WA+ WI +F ERL+AFA VEGIFFSGSFCAIFWLKKRGLMP
Sbjct: 186 LFRAMETMPCVRRKAYWAIRWIGSDASFQERLVAFAAVEGIFFSGSFCAIFWLKKRGLMP 245
Query: 190 GLTFSNELISRDEGLHCDFACLLYSLL--RTKLSEERVKALVKEAVEIEREFVCDALPCA 247
GLTFSNELISRDEGLHCDFAC LYS+L ++ ER+ +++++AVE E+EFVCDALP +
Sbjct: 246 GLTFSNELISRDEGLHCDFACHLYSMLPAEERVPAERIHSMIRDAVECEKEFVCDALPVS 305
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN +LMS YIEFVADRLL LGY +L+ NPFDWMELISLQGKTNFFEKRVGEYQK
Sbjct: 306 LIGMNQQLMSAYIEFVADRLLVELGYDRLWNTPNPFDWMELISLQGKTNFFEKRVGEYQK 365
Query: 308 ASVMSSLNGNGGNHVFKIDEDF 329
A+V +S N VF +D +F
Sbjct: 366 ANVTTSATDN----VFALDIEF 383
>gi|354484403|ref|XP_003504377.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Cricetulus griseus]
Length = 354
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 258/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEKHF++
Sbjct: 34 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKHFIS 93
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 94 HVLAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 153
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA EG FFSGSF AIFWLKK
Sbjct: 154 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAGEGGFFSGSFAAIFWLKK 213
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ +AV+IE+EF+ +AL
Sbjct: 214 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIVDAVQIEQEFLTEAL 273
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 274 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 333
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 334 YQRFAVMAETTDN----VFTLDADF 354
>gi|221060582|ref|XP_002260936.1| ribonucleotide reductase small subunit [Plasmodium knowlesi strain
H]
gi|193811010|emb|CAQ42908.1| ribonucleotide reductase small subunit,putative [Plasmodium
knowlesi strain H]
Length = 349
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/323 (64%), Positives = 253/323 (78%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L+ DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ +VQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 91 VLAFFAASDGIVLENLASKFLRQVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL EE V+ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGSRKIFHAKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ + VF ++ DF
Sbjct: 331 KSGVMAQ----RKDQVFCLNSDF 349
>gi|379729068|ref|YP_005321264.1| ribonucleoside-diphosphate reductase small chain [Saprospira
grandis str. Lewin]
gi|378574679|gb|AFC23680.1| ribonucleoside-diphosphate reductase small chain [Saprospira
grandis str. Lewin]
Length = 323
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/323 (64%), Positives = 260/323 (80%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N RF +FPIQ+ IWEM K+A A FWT +E+DL+ DL W+ L+A+E+HF+ H
Sbjct: 5 EPILQENDQRFVLFPIQHDAIWEMRKQALACFWTTDEIDLAADLHDWKKLSANEQHFIKH 64
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL F +VQ+AEAR+FY QI IE+IH+E YSLL++TYI+DS E
Sbjct: 65 VLAFFAASDGIVNENLVLNFYRDVQLAEARSFYATQIQIEDIHAETYSLLIDTYIQDSAE 124
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+A++T+PCV +KA WA+ WI+ + +FA RL+AFA VEGIFFSGSFC+I+WLKKRG
Sbjct: 125 KNALFNAMQTLPCVQRKAKWAIKWIEEAPSFAHRLVAFAAVEGIFFSGSFCSIYWLKKRG 184
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+MPGLTFSNELISRDEG+HCDFACLLYS+L + E +++++ EAV +E+EFV DALP
Sbjct: 185 IMPGLTFSNELISRDEGMHCDFACLLYSMLENPIPSEELRSIITEAVSLEQEFVTDALPV 244
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN +LMSQYIEFVADRLL +LG K+YG +NPF WMELISLQGKTNFFEKRVG+YQ
Sbjct: 245 SLIGMNAKLMSQYIEFVADRLLVSLGQPKVYGSSNPFPWMELISLQGKTNFFEKRVGDYQ 304
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA VM+ F +DEDF
Sbjct: 305 KAGVMAERE----KQTFSLDEDF 323
>gi|195172750|ref|XP_002027159.1| GL20023 [Drosophila persimilis]
gi|198459455|ref|XP_001361381.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
gi|194112972|gb|EDW35015.1| GL20023 [Drosophila persimilis]
gi|198136695|gb|EAL25959.2| GA21447 [Drosophila pseudoobscura pseudoobscura]
Length = 391
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 261/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+D W LT +E+
Sbjct: 69 PSI--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDATDWARLTDNER 126
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 127 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 186
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
++ E++ LF+AIET+P V +KA WA++WI S FAER+IAFA VEGIFFSGSF +IF
Sbjct: 187 REPQERDYLFNAIETMPAVKRKADWAMSWISSKSANFAERIIAFAAVEGIFFSGSFASIF 246
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L+Y L + ER+ ++++AVEIE+EF+
Sbjct: 247 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMYHHLVQRPKRERIIEIIRDAVEIEQEFL 306
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LMSQYIEFVADRLLG LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 307 TEALPVNLIGMNCVLMSQYIEFVADRLLGELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 366
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+V EYQ+ V++S N VF +D DF
Sbjct: 367 KVAEYQRMGVVTSRLDN----VFTLDADF 391
>gi|348513219|ref|XP_003444140.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Oreochromis niloticus]
Length = 349
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/325 (66%), Positives = 257/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQY IW+MYK+A+ASFWT EEVDLS+DL HW+ L A+EKHF++
Sbjct: 29 EEPLLRENPRRFVIFPIQYRDIWKMYKQAQASFWTVEEVDLSKDLAHWDRLKAEEKHFIS 88
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR+FY FQI IE +HSEMYS+L+ TYI+D
Sbjct: 89 HVLAFFAASDGIVNENLVQRFSQEVQVPEARSFYSFQILIETVHSEMYSMLINTYIRDLK 148
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF+AI+T+PCV +KA WAL WI D TF ER++AFA VEGIFFSGSF AI+WLKK
Sbjct: 149 ERDYLFNAIQTMPCVKRKADWALQWINDSKSTFGERIVAFAAVEGIFFSGSFAAIYWLKK 208
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLT+SNELISRDEGLHC+FACLLYS L K SE+RV+ ++ +AV IE+EF+ +AL
Sbjct: 209 RGLMPGLTYSNELISRDEGLHCNFACLLYSYLVKKPSEDRVRDIITKAVSIEQEFLTEAL 268
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
L+G+N LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 269 AVDLIGINSCLMKQYIEFVADRLLTDLGLTKVYQAENPFDFMESISLEGKTNFFEKRVAE 328
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VMSS+ F +D DF
Sbjct: 329 YQRFGVMSSMMDGE----FTLDADF 349
>gi|397502371|ref|XP_003821834.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 B [Pan paniscus]
Length = 515
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 195 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 254
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 255 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 314
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KK WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 315 KREFLFNAIETMPYVKKKXDWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 374
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 375 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 434
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 435 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 494
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 495 YQRFAVMAETTDN----VFTLDADF 515
>gi|440637324|gb|ELR07243.1| ribonucleoside-diphosphate reductase small subunit [Geomyces
destructans 20631-21]
Length = 412
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/344 (63%), Positives = 263/344 (76%), Gaps = 18/344 (5%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP+RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 71 PEEADEPLLQSNPNRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 130
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI IENIH+E YSLL++TY
Sbjct: 131 RYFISHVLAFFAASDGIVNENLLERFSSEVQIPEARCFYGFQIMIENIHAETYSLLIDTY 190
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AIET+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 191 IKEQAQRTYLFNAIETIPCIKKKADWAVRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASI 250
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLM GLTFSNELISRDEGLH DFACLL+S LR + S++ V+ ++ EAV IE+EF
Sbjct: 251 FWLKKRGLMAGLTFSNELISRDEGLHTDFACLLFSHLRHRPSKQAVQDVITEAVSIEQEF 310
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL +LG K Y NPFD+ME ISL GKTNFFE
Sbjct: 311 LTEALPCALLGMNANLMKQYIEFVADRLLLSLGNEKYYKATNPFDFMENISLAGKTNFFE 370
Query: 300 KRVGEYQKASVMSSLNG--------------NGGNHVFKIDEDF 329
KRV +YQK VM+S NGG+ F DEDF
Sbjct: 371 KRVADYQKTGVMASTTKKHEDTAAQIESKAENGGD--FNFDEDF 412
>gi|195333568|ref|XP_002033462.1| GM20395 [Drosophila sechellia]
gi|195582581|ref|XP_002081105.1| GD25870 [Drosophila simulans]
gi|194125432|gb|EDW47475.1| GM20395 [Drosophila sechellia]
gi|194193114|gb|EDX06690.1| GD25870 [Drosophila simulans]
Length = 393
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 259/329 (78%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D ++ LF+AIET+P V +KA WAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ ++++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN +LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+V EYQ+ V+S N ++VF +D DF
Sbjct: 369 KVAEYQRMGVVS----NPLDNVFTLDADF 393
>gi|258567064|ref|XP_002584276.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
reesii 1704]
gi|237905722|gb|EEP80123.1| ribonucleoside-diphosphate reductase small chain [Uncinocarpus
reesii 1704]
Length = 401
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/335 (65%), Positives = 260/335 (77%), Gaps = 13/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EEPLL NP RF +FP++Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F+
Sbjct: 69 EEPLLQENPQRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNHRLNDDERYFI 128
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 129 SRVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 188
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A++ +PC+ KKA WA+ WI D TFA+RLIAFA VEGIFFSGSF +IFWLK
Sbjct: 189 KQRTYLFEALDNIPCIRKKADWAIRWIQDKDSTFAQRLIAFAAVEGIFFSGSFASIFWLK 248
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S +R + + V+A++ EAVEIE+EF+ DA
Sbjct: 249 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHIRHRPTPAAVEAIITEAVEIEKEFLTDA 308
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 309 LPCALLGMNSKLMCQYIEFVADRLLVALGNKKFYHATNPFDFMDNISLAGKTNFFEKRVG 368
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F DEDF
Sbjct: 369 DYQKAGVMASTQKKDDTEEAIENGG--AFNFDEDF 401
>gi|380485558|emb|CCF39283.1| ribonucleoside-diphosphate reductase small subunit [Colletotrichum
higginsianum]
Length = 413
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/345 (64%), Positives = 268/345 (77%), Gaps = 19/345 (5%)
Query: 2 PSIPE----EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-AL 56
PSI E EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W +
Sbjct: 71 PSIKEQELDEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKI 130
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
DEK+F++H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL
Sbjct: 131 NEDEKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLL 190
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK+ ++ LF+AI+T+PC+ KKA WAL WI D +FA+RL+AFA VEGIFFSG+
Sbjct: 191 IDTYIKEPAQRTYLFNAIDTIPCIRKKADWALKWINDEKSSFAQRLVAFAAVEGIFFSGA 250
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+ + S++ ++ ++ +AV+I
Sbjct: 251 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKNRPSKQVIEDIIVDAVKI 310
Query: 236 EREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKT 295
E+EF+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKT
Sbjct: 311 EQEFLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYKSSNPFDFMENISLGGKT 370
Query: 296 NFFEKRVGEYQKASVMSSLNG-----------NGGNHVFKIDEDF 329
NFFEKRV +YQKA VM+S NGG+ VF DEDF
Sbjct: 371 NFFEKRVADYQKAGVMNSTKKAQEEPTEGKGENGGDFVF--DEDF 413
>gi|169613737|ref|XP_001800285.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
gi|111061216|gb|EAT82336.1| hypothetical protein SNOG_10001 [Phaeosphaeria nodorum SN15]
Length = 409
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/319 (68%), Positives = 260/319 (81%), Gaps = 7/319 (2%)
Query: 2 PSIPEE----PLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EAL 56
P+I EE PLL NP+RF +FPI+Y +W+MYKKAEASFWTAEE+DLS+DL W + L
Sbjct: 62 PTIKEEEAHEPLLQENPNRFVLFPIKYHDVWQMYKKAEASFWTAEEIDLSKDLHDWNKRL 121
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAG-RFMTEVQVAEARAFYGFQIAIENIHSEMYSL 115
DE+ F++HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI +ENIHSE YSL
Sbjct: 122 NDDERFFISHVLAFFAASDGIVNENLVDERFSSEVQIPEARCFYGFQIMMENIHSETYSL 181
Query: 116 LLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSG 174
L++TYI + ++ LF+AI+ +PC+ KKA WAL WI D + TFA RL+AFA VEGIFFSG
Sbjct: 182 LIDTYISEPRQRTYLFNAIDNIPCIRKKADWALKWISDKNSTFANRLVAFAAVEGIFFSG 241
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVE 234
SF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+SLL T+ S++ VKA++ EAVE
Sbjct: 242 SFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSLLNTRPSKDAVKAIITEAVE 301
Query: 235 IEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGK 294
IE+EF+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GK
Sbjct: 302 IEQEFLTEALPCALLGMNSTLMCQYIEFVADRLLLALGNTKVYNATNPFDFMENISLAGK 361
Query: 295 TNFFEKRVGEYQKASVMSS 313
TNFFEKRVG+YQKA VM+S
Sbjct: 362 TNFFEKRVGDYQKAGVMAS 380
>gi|46122063|ref|XP_385585.1| hypothetical protein FG05409.1 [Gibberella zeae PH-1]
Length = 399
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/336 (63%), Positives = 266/336 (79%), Gaps = 14/336 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W LT+DE++F+
Sbjct: 66 DEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQYFI 125
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 126 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKDP 185
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+A++T+PC+ KKA WA+ WI D + TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 186 AQRTYLFNAVDTIPCIRKKADWAIRWIQDKNSTFAQRLVAFAAVEGIFFSGAFASIFWLK 245
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL+S L+ + S++ ++ ++ +AV IE+EF+ +A
Sbjct: 246 KRGLMPGLSFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVSIEQEFLTEA 305
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 306 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKSTNPFDFMENISLGGKTNFFEKRVA 365
Query: 304 EYQKASVMSSLNG----------NGGNHVFKIDEDF 329
+YQKA V+ S N NGG+ F D+DF
Sbjct: 366 DYQKAGVLHSANKKDEEEAPKGENGGD--FTFDDDF 399
>gi|331245491|ref|XP_003335382.1| ribonucleoside-diphosphate reductase small chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|309314372|gb|EFP90963.1| ribonucleoside-diphosphate reductase small chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 380
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/339 (64%), Positives = 261/339 (76%), Gaps = 10/339 (2%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
+ S +EPLL + RF +FPI+Y +IW YK+AEASFWTAEE+DLS+D+ W+ L AD
Sbjct: 42 ITSDDQEPLLKEDGHRFVLFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWDNKLNAD 101
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
EKHF+ HVLAFFAASDGIV ENL RF EVQVAEAR FYGFQI +ENIHSE+YSLL++T
Sbjct: 102 EKHFIKHVLAFFAASDGIVNENLIERFSGEVQVAEARCFYGFQIMMENIHSEVYSLLIDT 161
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCA 178
Y+++ E+ LF AI+T+PC+ KKA WAL WI D TF ERLIAFA VEGIFFSGSF +
Sbjct: 162 YVREPTERAHLFDAIDTIPCIRKKADWALTWISDKKSTFGERLIAFAAVEGIFFSGSFAS 221
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL++ L + + V+A++ +AVEIE+E
Sbjct: 222 IFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFTHLERRPHPDTVQAIIAQAVEIEKE 281
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+ DALPC L+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME+ISL GKTNFF
Sbjct: 282 FLSDALPCKLIGMNADLMCQYIEFVADRLLVALGNEKFYNATNPFDFMEMISLSGKTNFF 341
Query: 299 EKRVGEYQKASVMSSLNGN--------GGNHVFKIDEDF 329
EKRV +Y KA VM+ G GG +F +DEDF
Sbjct: 342 EKRVSDYAKAGVMTRSRGEDGAEAKEAGGGGMFSLDEDF 380
>gi|424842989|ref|ZP_18267614.1| ribonucleotide reductase, beta subunit [Saprospira grandis DSM
2844]
gi|395321187|gb|EJF54108.1| ribonucleotide reductase, beta subunit [Saprospira grandis DSM
2844]
Length = 323
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/323 (64%), Positives = 259/323 (80%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N RF +FPIQ+ IWEM K+A A FWT +E+DL+ DL W+ L+A+E+HF+
Sbjct: 5 EPILQENDQRFVLFPIQHDAIWEMRKQALACFWTTDEIDLAADLHDWKKLSANEQHFIKQ 64
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL F +VQ+AEAR+FY QI IE+IH+E YSLL++TYI+DS E
Sbjct: 65 VLAFFAASDGIVNENLVLNFYRDVQLAEARSFYATQIQIEDIHAETYSLLIDTYIQDSAE 124
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+A++T+PCV +KA WA+ WI+ + +FA RLIAFA VEGIFFSGSFC+I+WLKKRG
Sbjct: 125 KNELFNAMQTLPCVQRKAKWAIKWIEEAPSFAHRLIAFAAVEGIFFSGSFCSIYWLKKRG 184
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+MPGLTFSNELISRDEG+HCDFACLLYS+L L E +++++ EAV +E+EFV DALP
Sbjct: 185 IMPGLTFSNELISRDEGMHCDFACLLYSMLENPLPSEELRSIITEAVSLEQEFVTDALPV 244
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN +LMSQYIEFVADRLL +LG K+YG +NPF WMELISLQGKTNFFEKRVG+YQ
Sbjct: 245 SLIGMNAKLMSQYIEFVADRLLVSLGQPKVYGSSNPFPWMELISLQGKTNFFEKRVGDYQ 304
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA VM+ F +DEDF
Sbjct: 305 KAGVMAERE----KQTFSLDEDF 323
>gi|326916502|ref|XP_003204546.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Meleagris gallopavo]
Length = 339
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/323 (68%), Positives = 257/323 (79%), Gaps = 6/323 (1%)
Query: 8 PLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHV 67
PLL NP FPIQY IW MYKKAEASFWTAEEVDLS+DL+HWE+L +EK+F++HV
Sbjct: 22 PLLRENPGG-SSFPIQYHDIWRMYKKAEASFWTAEEVDLSKDLQHWESLKPEEKYFISHV 80
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
LAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKDS E+
Sbjct: 81 LAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKER 140
Query: 128 NRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
LF+AIET+PCV KKA WA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRG
Sbjct: 141 EFLFNAIETLPCVKKKADWAIRWIGDKKATYGERVVAFAAVEGIFFSGSFASIFWLKKRG 200
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK ++ AV IE+EF+ +ALP
Sbjct: 201 LMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVKEIIMNAVLIEQEFLTEALPV 260
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 261 KLIGMNCTLMKQYIEFVADRLMLELGFRKIYKVENPFDFMENISLEGKTNFFEKRVGEYQ 320
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
+ VMS N F +D +F
Sbjct: 321 RMGVMSKPTDNS----FTLDAEF 339
>gi|403418121|emb|CCM04821.1| predicted protein [Fibroporia radiculosa]
Length = 412
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/333 (66%), Positives = 260/333 (78%), Gaps = 7/333 (2%)
Query: 4 IPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
+PE EPLL + RF +FPIQY +IW+MYKKAEASFWT EEVDLS+D W L+ +E
Sbjct: 80 LPEHMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTVEEVDLSKDFHDWNNRLSDNE 139
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 140 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 199
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD ++ LF AIET+PC+ KKA WAL WI D +FAERL+AFA VEGIFFSGSF +I
Sbjct: 200 IKDPQQREHLFDAIETIPCIKKKADWALRWISDKGCSFAERLVAFAAVEGIFFSGSFASI 259
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E V+ ++ EAVEIE+EF
Sbjct: 260 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVRRIIAEAVEIEQEF 319
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN LM QYIEFVADRLL ALG K+YG NPFD+M++ISLQGKTNFFE
Sbjct: 320 LTDALPCALIGMNSGLMCQYIEFVADRLLVALGDSKMYGSTNPFDFMDMISLQGKTNFFE 379
Query: 300 KRVGEYQKASVMSS---LNGNGGNHVFKIDEDF 329
KRV +Y KA V +S + F +DEDF
Sbjct: 380 KRVSDYAKAGVNASATNVKSEVSAKSFSLDEDF 412
>gi|328771482|gb|EGF81522.1| hypothetical protein BATDEDRAFT_16297 [Batrachochytrium
dendrobatidis JAM81]
Length = 336
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/328 (65%), Positives = 255/328 (77%), Gaps = 5/328 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKH 62
+ EP+L P+P R +FPI+YP +W MYKKAEASFWTAEEVDLS+D WE LT DE++
Sbjct: 12 VQNEPILTPDPRRSVLFPIKYPAVWRMYKKAEASFWTAEEVDLSKDTLDWEERLTDDERY 71
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++ VLAFFAASDGIV ENL RF +V + EAR FY FQI IENIHSEMYSLL++TYIK
Sbjct: 72 FISRVLAFFAASDGIVNENLVERFSQDVHIPEARYFYDFQIMIENIHSEMYSLLIDTYIK 131
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E+ LF AI+TVPC+ KKA WAL WI D +F ERL+AFA VEGIFFSGSF +IFW
Sbjct: 132 DRKERAFLFDAIDTVPCIRKKADWALRWISDKKSSFGERLVAFAAVEGIFFSGSFASIFW 191
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLH DFACLL++LL K ++ ++ ++ EAV IE+EF
Sbjct: 192 LKKRGLMPGLTFSNELISRDEGLHTDFACLLFTLLNNKPTDSVIQQIIHEAVTIEQEFST 251
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
++LP AL+GMN LM QYIEFVADRL LG K YGV NPFD+M++ISLQGKTNFFEKR
Sbjct: 252 ESLPVALIGMNANLMKQYIEFVADRLFIELGMPKKYGVGNPFDFMDMISLQGKTNFFEKR 311
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQK+ VM N N + F I+ DF
Sbjct: 312 VGEYQKSGVM---NTNASSKEFTIEADF 336
>gi|380024292|ref|XP_003695935.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2-like [Apis florea]
Length = 383
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/310 (70%), Positives = 256/310 (82%), Gaps = 3/310 (0%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
PE EPLL NP RF +FPIQ+P IW+MYKKAEASFWT EEVDLS+D+ W LTA EKHF
Sbjct: 62 PELEPLLKENPRRFVVFPIQWPDIWQMYKKAEASFWTVEEVDLSKDVFDWNNLTASEKHF 121
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQ+A+EN+HSEMYSLL++TYI D
Sbjct: 122 ISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQVAMENVHSEMYSLLIDTYIAD 181
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ E + LF+AIE +PCVAKKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWL
Sbjct: 182 AKE-DFLFNAIENLPCVAKKAHWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWL 240
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ + K S ERV +++K+AV+IE+EF+ D
Sbjct: 241 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSCERVTSIIKDAVKIEQEFLTD 300
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN +LM QYIEFVADRLL LG K+Y NPFD+ME ISL+GKTNFFEK+V
Sbjct: 301 ALPVEMIGMNCKLMCQYIEFVADRLLVELGCKKIYMSENPFDFMEHISLEGKTNFFEKKV 360
Query: 303 GEYQKASVMS 312
GEYQK VM
Sbjct: 361 GEYQKWGVMQ 370
>gi|302904131|ref|XP_003049009.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729943|gb|EEU43296.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 389
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/336 (64%), Positives = 266/336 (79%), Gaps = 14/336 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W LT+DE+ F+
Sbjct: 56 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQFFI 115
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 116 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 175
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AIET+PC+ KKA WA+ WI D +FA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 176 SQRTYLFNAIETIPCIRKKADWAIRWIQDKDSSFAQRLVAFAAVEGIFFSGAFASIFWLK 235
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S++ ++ ++ +AV IE+EF+ +A
Sbjct: 236 KRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKGRASKQVIQDIITDAVTIEQEFLTEA 295
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K+Y ANPFD+ME ISL GKTNFFEKRVG
Sbjct: 296 LPCALLGMNADLMKQYIEFVADRLLVALGNEKVYKSANPFDFMENISLGGKTNFFEKRVG 355
Query: 304 EYQKASVMSSLNG----------NGGNHVFKIDEDF 329
+YQKA V+ S NGG+ F D+DF
Sbjct: 356 DYQKAGVLHSATKNTEEEAPKGENGGD--FTFDDDF 389
>gi|66822029|ref|XP_644369.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|66823381|ref|XP_645045.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|41019487|sp|P42521.2|RIR2_DICDI RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|29611978|gb|AAB72227.2| ribonucleotide reductase small subunit [Dictyostelium discoideum]
gi|60472492|gb|EAL70444.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
gi|60472997|gb|EAL70945.1| ribonucleotide reductase small subunit [Dictyostelium discoideum
AX4]
Length = 338
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/327 (64%), Positives = 260/327 (79%), Gaps = 4/327 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI+YP IW MYKKA AS W AEE+DL D WE LT +E+HF++
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA RFM+EVQ+ EAR FYGFQIAIENIHSE YSLL+ETYIKD
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K++LF+AIET+PC+ KKA WAL WI+ S++FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLM GLTFSNELISRDEGLHCDFACLLY+ L+ KL + ++ ++++AVE E+EF+C++LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN MSQYIEF ADRL+ +LGY K++ +NPF+WME+ISLQ K+NFFE +V EY
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEY 311
Query: 306 QKASV---MSSLNGNGGNHVFKIDEDF 329
K V ++ N + +DEDF
Sbjct: 312 AKTGVAIQGNNQQKNNQSRTLVLDEDF 338
>gi|169860861|ref|XP_001837065.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
gi|116501787|gb|EAU84682.1| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
Length = 414
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/333 (65%), Positives = 260/333 (78%), Gaps = 9/333 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W L +E+HF+
Sbjct: 82 EEPLLKESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNKLNDNERHFI 141
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 142 SHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 201
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF A++T+PC+ KKA WAL WI D TFAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 202 AQRDYLFDAVDTIPCIKKKADWALTWISDQKSTFAERLVAFAAVEGIFFSGSFASIFWLK 261
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + + VK ++ EAV IE+EF+ DA
Sbjct: 262 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDVVKRIITEAVAIEQEFLTDA 321
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN ELM QYIEFVADRLL +LG K+Y NPFD+M++ISLQGKTNFFEKRV
Sbjct: 322 LPVKLIGMNAELMCQYIEFVADRLLVSLGNEKVYNSTNPFDFMDMISLQGKTNFFEKRVS 381
Query: 304 EYQKASV----MSSLNGN---GGNHVFKIDEDF 329
+Y KA V SS + + N +F +DEDF
Sbjct: 382 DYAKAGVNQTAASSTDASQPQASNRLFSLDEDF 414
>gi|390945295|ref|YP_006409056.1| ribonucleotide reductase subunit beta [Belliella baltica DSM 15883]
gi|390418723|gb|AFL86301.1| ribonucleotide reductase, beta subunit [Belliella baltica DSM
15883]
Length = 326
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 261/324 (80%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N +RF +FPIQ+ IW+ YKKAEASFWTAEE+DLSQDL W+ L E+HF++H
Sbjct: 5 EPILQENKNRFVLFPIQHNDIWQYYKKAEASFWTAEEIDLSQDLSDWKNLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F++EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIKD+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDNQE 124
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+++L +AIE + CV KKA WAL WID +F ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLHCDFAC LY+ ++ +L +E V ++K+AVEIE+EFV DALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTEHVKNQLPKETVAMIIKDAVEIEKEFVTDALP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL LG K++ NPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VRLIGMNSDLMCQYIEFVADRLLMELGCEKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM S N + F I EDF
Sbjct: 304 QKAGVMKS-NEINESPKFSIGEDF 326
>gi|389585905|dbj|GAB68635.1| ribonucleoside-diphosphate reductase small chain [Plasmodium
cynomolgi strain B]
Length = 355
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/323 (64%), Positives = 253/323 (78%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L+ DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 37 EKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 96
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ +VQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 97 VLAFFAASDGIVLENLASKFLRQVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 156
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 157 RMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 216
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL EE V+ +VKEAVE+ER F+C++LPC
Sbjct: 217 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 276
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 277 DLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMDLISLQGKTNFFEKRVADYQ 336
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ + VF ++ DF
Sbjct: 337 KSGVMAQ----RKDQVFSLNSDF 355
>gi|342870144|gb|EGU73441.1| hypothetical protein FOXB_16079 [Fusarium oxysporum Fo5176]
Length = 409
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 264/337 (78%), Gaps = 15/337 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W LTADE+ FV
Sbjct: 75 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTADEQFFV 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 135 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AIET+PC+ KKA WA+ WI D +FA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 195 AQRTYLFNAIETIPCIRKKADWAIRWIQDKDSSFAQRLVAFAAVEGIFFSGAFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S++ ++ ++ +AV IE+EF+ +A
Sbjct: 255 KRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVTIEQEFLTEA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPCALLGMNSDLMKQYIEFVADRLLVALGNEKVYKATNPFDFMENISLGGKTNFFEKRVA 374
Query: 304 EYQKASVMSSLNG-----------NGGNHVFKIDEDF 329
+YQKA V+ S NGG+ F DEDF
Sbjct: 375 DYQKAGVLHSATKKTEEDESPKGENGGDFTF--DEDF 409
>gi|296421312|ref|XP_002840209.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636423|emb|CAZ84400.1| unnamed protein product [Tuber melanosporum]
Length = 397
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/332 (64%), Positives = 261/332 (78%), Gaps = 8/332 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
+EP+L N RF +FPI+Y +IW+MYKKAEASFW AEE+DLS+D+ W + L DE++F+
Sbjct: 66 DEPILTENKHRFVLFPIKYHEIWQMYKKAEASFWVAEEIDLSKDMHDWSDRLNDDERYFI 125
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +EN+HSE YSLL++TYIKD
Sbjct: 126 SHVLAFFAASDGIVNENLVQRFSNEVQIPEARCFYGFQIMMENVHSETYSLLIDTYIKDP 185
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D + TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 186 KQRTYLFDAIDTIPCIKKKADWAIRWIEDRNSTFAQRLVAFAAVEGIFFSGSFASIFWLK 245
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL++ L + S++ V+ ++ EAV IE+EF+ +A
Sbjct: 246 KRGLMPGLSFSNELISRDEGLHTDFACLLFNHLNNRPSQQAVQDIIVEAVGIEQEFLTEA 305
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL +LG K Y NPFD+ME ISL GKTNFFEKRVG
Sbjct: 306 LPCALLGMNSKLMKQYIEFVADRLLLSLGNPKFYNATNPFDFMESISLAGKTNFFEKRVG 365
Query: 304 EYQKASVMSSLNG------NGGNHVFKIDEDF 329
+YQKA VM+S N G V + DEDF
Sbjct: 366 DYQKAGVMASTQKKTEEPTNNGEGVIRFDEDF 397
>gi|328855581|gb|EGG04707.1| hypothetical protein MELLADRAFT_49061 [Melampsora larici-populina
98AG31]
Length = 385
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/334 (65%), Positives = 258/334 (77%), Gaps = 10/334 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + RF +FPI+Y +IW YK+AEASFWTAEE+DLS+D+ WE L DEKHF+
Sbjct: 52 EEPLLKEDGHRFVLFPIKYHEIWASYKRAEASFWTAEEIDLSKDMHDWENRLNDDEKHFI 111
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE+YSLL++TY+++
Sbjct: 112 KHVLAFFAASDGIVNENLIERFSGEVQAAEARCFYGFQIMMENIHSEVYSLLIDTYVREP 171
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF AI+T+PC+ KKA WAL WI D TF ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 172 IERSHLFDAIDTIPCIRKKADWALKWISDKQSTFGERLIAFAAVEGIFFSGSFASIFWLK 231
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + + V+A++ +AVEIE+EF+ DA
Sbjct: 232 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLERRPHPDTVQAIISQAVEIEKEFLSDA 291
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPC L+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME+ISL GKTNFFEKRV
Sbjct: 292 LPCKLIGMNADLMCQYIEFVADRLLVALGNDKFYNAENPFDFMEMISLSGKTNFFEKRVS 351
Query: 304 EYQKASVMSSLNGN--------GGNHVFKIDEDF 329
+Y KA VM+ G GG +F +DEDF
Sbjct: 352 DYAKAGVMTRSKGEDGADAKEAGGGGLFSLDEDF 385
>gi|255954081|ref|XP_002567793.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589504|emb|CAP95650.1| Pc21g07530 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 400
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 222/332 (66%), Positives = 259/332 (78%), Gaps = 9/332 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL NP RF MFPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F++
Sbjct: 69 EPLLQENPHRFVMFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDERYFIS 128
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 129 HVLAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPK 188
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+ KKA WA+ WI+ E TFA RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 189 QRTYLFDAIDTIPCITKKANWAIRWINDRESTFASRLVAFAAVEGIFFSGSFASIFWLKK 248
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S + + + V+ ++ EAV IE+EF+ DAL
Sbjct: 249 RGLMPGLTFSNELISRDEGLHTDFACLLFSHMNHRPDPKVVEEIIVEAVGIEQEFLTDAL 308
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN +LM QYIEFVADRLL ALG K Y ANPFD+ME ISL GKTNFFEKRVG+
Sbjct: 309 PCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNSANPFDFMESISLAGKTNFFEKRVGD 368
Query: 305 YQKASVMSS----LNGNGGNHV---FKIDEDF 329
YQKA VM+S +N G V DEDF
Sbjct: 369 YQKAGVMASTKQEVNAEGEKVVSDGLNFDEDF 400
>gi|145249942|ref|XP_001401310.1| ribonucleoside-diphosphate reductase small chain [Aspergillus niger
CBS 513.88]
gi|134081995|emb|CAK46680.1| unnamed protein product [Aspergillus niger]
gi|350639699|gb|EHA28053.1| hypothetical protein ASPNIDRAFT_56635 [Aspergillus niger ATCC 1015]
Length = 396
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/342 (65%), Positives = 262/342 (76%), Gaps = 18/342 (5%)
Query: 2 PSIPE----EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-AL 56
P I E EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L
Sbjct: 59 PGIKEMEASEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRL 118
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
DE++F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL
Sbjct: 119 NDDERYFISHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLL 178
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK+ ++ LF AI+T+PC+AKKA WA+ WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 179 IDTYIKEPKQRTYLFDAIDTIPCIAKKADWAIKWIQDRESTFAQRLVAFAAVEGIFFSGS 238
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++ EAV I
Sbjct: 239 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVGI 298
Query: 236 EREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKT 295
E+EF+ DALP AL+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKT
Sbjct: 299 EQEFLTDALPVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNATNPFDFMESISLAGKT 358
Query: 296 NFFEKRVGEYQKASVMSS--------LNGNGGNHVFKIDEDF 329
NFFEKRVG+YQKA VM+S N NG DEDF
Sbjct: 359 NFFEKRVGDYQKAGVMASTKKEEEVKTNSNG----LSFDEDF 396
>gi|393215957|gb|EJD01448.1| ribonucleotide reductase small subunit [Fomitiporia mediterranea
MF3/22]
Length = 412
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/331 (64%), Positives = 260/331 (78%), Gaps = 7/331 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+D W+ L +E+HF+
Sbjct: 82 QEPLLVESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDQHDWQNKLNDNERHFI 141
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 142 SHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 201
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A+ET+PC+ +KA WAL+WI D TF ERL+AFA VEGIFFSG+F +IFWLK
Sbjct: 202 VQREYLFDAVETIPCIKRKADWALHWISDKRSTFGERLVAFAAVEGIFFSGAFASIFWLK 261
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + + VK ++ +AV+IE+EF+ DA
Sbjct: 262 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVKKIITDAVKIEQEFLTDA 321
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K+Y NPFD+M++ISLQGKTNFFEKRV
Sbjct: 322 LPVSLIGMNAKLMCQYIEFVADRLLTALGNEKVYNSTNPFDFMDMISLQGKTNFFEKRVS 381
Query: 304 EYQKASVMSSLNGN-----GGNHVFKIDEDF 329
+Y KA V S + G + VF +DEDF
Sbjct: 382 DYAKAGVNVSASSKTKAEGGSSKVFTVDEDF 412
>gi|195027582|ref|XP_001986661.1| GH20400 [Drosophila grimshawi]
gi|193902661|gb|EDW01528.1| GH20400 [Drosophila grimshawi]
Length = 393
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/329 (65%), Positives = 259/329 (78%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+D+ W LT +E+
Sbjct: 71 PSI--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDMTDWVRLTDNER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D +++ LF+AIET+P V +KA WAL+WI + F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQRDYLFNAIETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA +++ L + S ER+ +V +AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVMMFQHLVQRPSRERIIEIVSDAVTIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN LMS+YIEFVADRLL LG GK+Y NPF +ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCALMSEYIEFVADRLLVELGVGKIYNTKNPFTFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQ+ V S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVTS----NRLDNVFTLDADF 393
>gi|326437649|gb|EGD83219.1| ribonucleotide reductase M2 B [Salpingoeca sp. ATCC 50818]
Length = 408
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/327 (65%), Positives = 256/327 (78%), Gaps = 2/327 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
I EPLL NP RF + PIQ+ Q+W MYKKA ASFWTAEEVDLS+DL HW L E+HF
Sbjct: 83 IAAEPLLRENPSRFVILPIQHRQVWSMYKKAVASFWTAEEVDLSRDLDHWRGLKDTEQHF 142
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ HVLAFFAASDGIV ENL RFM EVQ+ EAR FYGFQI IENIHSEMYSLL++TYI D
Sbjct: 143 IKHVLAFFAASDGIVNENLVERFMCEVQLPEARCFYGFQIMIENIHSEMYSLLIDTYIND 202
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK+ LF+A+ET+P V +KA WA+ WID +FAER++AFA VEGIFFSGSF AIFWL
Sbjct: 203 PQEKHMLFNAVETLPAVKRKAEWAMRWIDHKRASFAERVVAFAAVEGIFFSGSFAAIFWL 262
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLT SNELISRDEGLHCDFACL++S+L K +ERV ++ +AVEIE+EF+ +
Sbjct: 263 KKRGLMPGLTQSNELISRDEGLHCDFACLMFSMLHKKPPKERVIGIIMDAVEIEQEFLTE 322
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP +L+GMN LM +YIEFV+DRLL +LGY K+Y NPF +ME IS++GKTNFFE+RV
Sbjct: 323 ALPVSLLGMNSTLMREYIEFVSDRLLVSLGYDKVYNATNPFPFMENISIEGKTNFFERRV 382
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQK+ VM++ +H D DF
Sbjct: 383 SEYQKSGVMAA-EKKEHSHQLVFDADF 408
>gi|367026740|ref|XP_003662654.1| hypothetical protein MYCTH_68292 [Myceliophthora thermophila ATCC
42464]
gi|347009923|gb|AEO57409.1| hypothetical protein MYCTH_68292 [Myceliophthora thermophila ATCC
42464]
Length = 414
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/342 (64%), Positives = 264/342 (77%), Gaps = 16/342 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 75 PEEADEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 134
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K+F++H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 135 KYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTY 194
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ +++ LF+AIET+P + KKA WAL WI D TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 195 IKEPAQRSHLFNAIETIPAIRKKADWALRWIADKKSTFAQRLVAFAAVEGIFFSGAFASI 254
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ ++ ++ +AV IE+EF
Sbjct: 255 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPSKQVIEDIIVDAVRIEQEF 314
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 315 LTEALPCALLGMNANLMKQYIEFVADRLLLALGNEKVYRSTNPFDFMENISLGGKTNFFE 374
Query: 300 KRVGEYQKASVMSSLNG------------NGGNHVFKIDEDF 329
KRVG+YQKA VM+S NGG+ F D+DF
Sbjct: 375 KRVGDYQKAGVMASTKKFVQEDSDEPKGENGGD--FTFDDDF 414
>gi|156102402|ref|XP_001616894.1| ribonucleoside-diphosphate reductase small chain [Plasmodium vivax
Sal-1]
gi|148805768|gb|EDL47167.1| ribonucleoside-diphosphate reductase small chain, putative
[Plasmodium vivax]
Length = 349
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/323 (63%), Positives = 253/323 (78%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L+ DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDNEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ +V++ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 91 VLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL EE V+ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ + VF ++ DF
Sbjct: 331 KSGVMAQ----RKDQVFCLNSDF 349
>gi|401410906|ref|XP_003884901.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
gi|325119319|emb|CBZ54873.1| hypothetical protein NCLIV_052980 [Neospora caninum Liverpool]
Length = 392
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/324 (67%), Positives = 259/324 (79%), Gaps = 4/324 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP R+ + PIQ+ IWEMYKK EASFWTAEE+DL+QD+ HWE+L ++EKHF+
Sbjct: 73 EEPLLIANPRRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWESLNSNEKHFIK 132
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIVLENLA +F++E+Q+ EARAFYGFQIA+ENIHSE YSLL++ YI+D
Sbjct: 133 YVLAFFAASDGIVLENLAEKFLSEIQIPEARAFYGFQIAMENIHSETYSLLIDQYIRDEK 192
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF A+ V VA KA WA WI+ FAERL+ FACVEGI FSGSFC+IFWLKKR
Sbjct: 193 EKMELFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFCSIFWLKKR 252
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACLLYS L+ KL ++ V+ +V+EAV +ER F+C+ALP
Sbjct: 253 GLMPGLTFSNELISRDEGLHADFACLLYSQLKNKLPDKVVQDMVREAVTVERAFICEALP 312
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN M+QYIEFVADRLL +LG K++ NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 313 VDLIGMNNRSMAQYIEFVADRLLTSLGVPKIFFATNPFDWMELISLQGKTNFFEKRVGEY 372
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM+ + F +D DF
Sbjct: 373 QKAGVMA----DKEQQKFVLDADF 392
>gi|402226169|gb|EJU06229.1| ribonucleotide reductase small subunit [Dacryopinax sp. DJM-731
SS1]
Length = 421
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/345 (63%), Positives = 260/345 (75%), Gaps = 21/345 (6%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W+ L +E+HF+
Sbjct: 77 DEPLLKSTQRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWQNRLNNNERHFI 136
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD+
Sbjct: 137 SHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDA 196
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF AI+T+PC+ +KA WAL WI D TFAERL+AFA VEGIFFSGSF AIFW+K
Sbjct: 197 EQREYLFDAIDTIPCIKRKADWALKWISDKRSTFAERLVAFAAVEGIFFSGSFAAIFWMK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + + V+ ++ EAV IE+ F+ DA
Sbjct: 257 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVRKIITEAVLIEQTFLTDA 316
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QYIEFVADRLL ALG K+Y V NPFD+M+LISLQGKTNFFEKRV
Sbjct: 317 LPVALIGMNSNLMNQYIEFVADRLLVALGNEKVYNVTNPFDFMDLISLQGKTNFFEKRVS 376
Query: 304 EYQKASVM---------SSLNGNGGNHV----------FKIDEDF 329
+Y KA V S N G V F +DEDF
Sbjct: 377 DYAKAGVNVSAAQKSKPSKPNSTGSTEVQQETPISSKTFTLDEDF 421
>gi|391328598|ref|XP_003738774.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Metaseiulus occidentalis]
Length = 374
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/327 (65%), Positives = 257/327 (78%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ EPLL NP+RF +FPI+YP IW MYKKA+ASFWTAEEVDL +D+ W +++ E+ F
Sbjct: 52 VESEPLLRENPNRFVLFPIEYPDIWRMYKKAQASFWTAEEVDLGKDMADWHKMSSQEQEF 111
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+LAFFAASDGIV ENL RF EVQV EAR FYGFQ+ +ENIHSEMYSLLL TYI D
Sbjct: 112 IKHILAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQVMMENIHSEMYSLLLNTYITD 171
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
E++ LF AIET+PC+ KKA WALNWI + + T+ ER++AFA VEGIFFSG+F +IFWL
Sbjct: 172 PMERDHLFRAIETMPCIKKKADWALNWIGNQNATYGERVVAFAAVEGIFFSGAFASIFWL 231
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLH DFACL++ L K S ER+ +++ AV IE+EF+ +
Sbjct: 232 KKRGLMPGLTFSNELISRDEGLHTDFACLMFRHLVQKPSVERIYEIIRNAVAIEQEFLTE 291
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALPCA++GMN +LM QYIEFVADRLL L KL+ NPFD+ME ISL+GKTNFFEKRV
Sbjct: 292 ALPCAMLGMNCDLMKQYIEFVADRLLVELECDKLWNSQNPFDFMEQISLEGKTNFFEKRV 351
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
GEYQKA VM+ N + +FK D DF
Sbjct: 352 GEYQKAGVMA----NKEDQIFKTDFDF 374
>gi|407916476|gb|EKG09844.1| Ribonucleotide reductase [Macrophomina phaseolina MS6]
Length = 407
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/311 (69%), Positives = 252/311 (81%), Gaps = 2/311 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + L DE+ F++
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFIS 133
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI +
Sbjct: 134 HVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPR 193
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++N LF+AI+ +PC+ KKA WAL WI D + TFA RLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRNYLFNAIDNIPCIKKKADWALRWICDKNSTFASRLIAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEG+H DFACLL+S +++K S E V+ ++ EAVEIE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGMHTDFACLLFSHIKSKPSPESVEKIITEAVEIEKEFLTDAL 313
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 314 PVALLGMNATLMCQYIEFVADRLLVALGNKKYYNSTNPFDFMENISLNGKTNFFEKRVGD 373
Query: 305 YQKASVMSSLN 315
YQKA VM N
Sbjct: 374 YQKAGVMEKTN 384
>gi|312130971|ref|YP_003998311.1| ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
17132]
gi|311907517|gb|ADQ17958.1| Ribonucleoside-diphosphate reductase [Leadbetterella byssophila DSM
17132]
Length = 328
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/324 (67%), Positives = 258/324 (79%), Gaps = 6/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL +P RF +FPI++ IWE YKKAEASFWTAEE+DLSQD + W +L E+HF++H
Sbjct: 10 EPLLMDDPTRFVIFPIKHNDIWEFYKKAEASFWTAEELDLSQDHKDWASLNDGERHFISH 69
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F++ VQ AEA+ FYGFQI IENIH+E YSLL++TYIKD+ E
Sbjct: 70 VLAFFAASDGIVNENLAVGFLSNVQYAEAKCFYGFQIMIENIHAETYSLLIDTYIKDTTE 129
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ R+ +AIET+PCV KKA WA+ WI+ TF ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 130 RQRMLNAIETIPCVKKKADWAIRWIEQG-TFIERLIAFAAVEGIFFSGSFCSIFWLKKRG 188
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY+ + KL EE+V ++K+AVEIE+EFV DALP
Sbjct: 189 LMPGLTFSNELISRDEGLHRDFACLLYTKYIVNKLPEEQVYTIIKDAVEIEKEFVSDALP 248
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN M QYIEFVAD LL +L K+Y NPFD+M+LISLQGKTNFFEKRVGEY
Sbjct: 249 VSLIGMNAPQMCQYIEFVADHLLESLNLKKVYNATNPFDFMDLISLQGKTNFFEKRVGEY 308
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA V + + F +DEDF
Sbjct: 309 QKAGVTADKDKMN----FSLDEDF 328
>gi|408391189|gb|EKJ70571.1| hypothetical protein FPSE_09324 [Fusarium pseudograminearum CS3096]
Length = 392
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 213/336 (63%), Positives = 266/336 (79%), Gaps = 14/336 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W LT+DE++F+
Sbjct: 59 DEPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLTSDEQYFI 118
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 119 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKDP 178
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+A++T+PC+ KKA WA+ WI D + +FA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 179 AQRTYLFNAVDTIPCIRKKADWAIRWIQDKNSSFAQRLVAFAAVEGIFFSGAFASIFWLK 238
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL+S L+ + S++ ++ ++ +AV IE+EF+ +A
Sbjct: 239 KRGLMPGLSFSNELISRDEGLHTDFACLLHSHLKGRASKQMIQDIITDAVSIEQEFLTEA 298
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 299 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKSTNPFDFMENISLGGKTNFFEKRVA 358
Query: 304 EYQKASVMSSLNG----------NGGNHVFKIDEDF 329
+YQKA V+ S N NGG+ F D+DF
Sbjct: 359 DYQKAGVLHSANKKDEEEAPKGENGGD--FTFDDDF 392
>gi|119478853|ref|XP_001259462.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
fischeri NRRL 181]
gi|119407616|gb|EAW17565.1| ribonucleotide reductase small subunit RnrA, putative [Neosartorya
fischeri NRRL 181]
Length = 405
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/333 (65%), Positives = 258/333 (77%), Gaps = 10/333 (3%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F++
Sbjct: 73 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFIS 132
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 133 HVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPK 192
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+AKKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 193 QRTYLFDAIDTIPCIAKKAQWAMRWISDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + ++ V+ ++ EAV IE+EF+ +AL
Sbjct: 253 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPDKKVVEDIIVEAVAIEQEFLTEAL 312
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM QYIEFVADRLL ALG K Y +NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 313 PVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNSSNPFDFMESISLAGKTNFFEKRVGD 372
Query: 305 YQKASVMSSLNGNGGNHVFK--------IDEDF 329
YQKA VM+S + K DEDF
Sbjct: 373 YQKAGVMASTKKDASQDTAKDANDGGLSFDEDF 405
>gi|116191729|ref|XP_001221677.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
gi|88181495|gb|EAQ88963.1| hypothetical protein CHGG_05582 [Chaetomium globosum CBS 148.51]
Length = 409
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 262/337 (77%), Gaps = 15/337 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + DEK+F+
Sbjct: 75 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEKYFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 135 SHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+P + KKA WAL WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 195 AQRTHLFNAIDTIPAIRKKADWALRWITDQKSTFAQRLVAFAAVEGIFFSGAFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ ++ ++ +AV IE+EF+ +A
Sbjct: 255 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQIIEDIIVDAVRIEQEFLTEA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRVG
Sbjct: 315 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYRSTNPFDFMENISLGGKTNFFEKRVG 374
Query: 304 EYQKASVMSSLNG-----------NGGNHVFKIDEDF 329
EYQKA VM+S NGG+ F D+DF
Sbjct: 375 EYQKAGVMASTKKPQEDVEEAKGENGGDFTF--DDDF 409
>gi|50545856|ref|XP_500466.1| YALI0B03630p [Yarrowia lipolytica]
gi|49646332|emb|CAG82692.1| YALI0B03630p [Yarrowia lipolytica CLIB122]
Length = 403
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/331 (66%), Positives = 259/331 (78%), Gaps = 4/331 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEK 61
S +EPLL N RF +FPIQY +IW+MYKKAEASFWTAEE+DL +D+ WE L DE+
Sbjct: 73 SEKDEPLLKENHRRFVLFPIQYHEIWQMYKKAEASFWTAEEIDLGKDMGDWENRLNNDER 132
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
F++HVLAFFAASDGIV ENL RF EVQ EA+ FYGFQI +ENIHSE YSLL++TYI
Sbjct: 133 FFISHVLAFFAASDGIVNENLVERFSGEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYI 192
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PC+ KKA WAL WI D TF ERLIAFA VEGIFFSGSF +IF
Sbjct: 193 KDPKERTYLFNAIETIPCIKKKADWALKWISDEESTFGERLIAFAAVEGIFFSGSFASIF 252
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++ EAV IE+EF+
Sbjct: 253 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLENRPSKKIVEDVIVEAVGIEQEFL 312
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALPC L+GMN +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEK
Sbjct: 313 TDALPCGLLGMNAKLMCQYIEFVADRLLVALGNSKVYNSTNPFDFMENISLAGKTNFFEK 372
Query: 301 RVGEYQKASVMSSLNG--NGGNHVFKIDEDF 329
RV +YQKA VM++ N ++ F +DEDF
Sbjct: 373 RVSDYQKAGVMANSNQEEKSNSNGFSLDEDF 403
>gi|428672848|gb|EKX73761.1| ribonucleoside-diphosphate reductase small chain, putative [Babesia
equi]
Length = 335
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/310 (65%), Positives = 250/310 (80%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL P+P R ++PI++P WE YKKA+ASFWTAEE+D S DL HW LT+DE+HF++
Sbjct: 16 DEFLLNPDPLRIGLYPIKFPDFWEWYKKAQASFWTAEEIDFSLDLAHWNKLTSDERHFIS 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIVLENLA +F+ +V++ EA++FY FQIA+ENIHSE YSLL+E YIKD
Sbjct: 76 NVLAFFAASDGIVLENLALKFLRDVKLPEAQSFYSFQIAVENIHSETYSLLIENYIKDEA 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+ RLF AI+T+ V KA WA WI + FAER++A+A VEGI FSGSFCA+FWLKKR
Sbjct: 136 ERTRLFRAIDTIQAVKDKANWAAKWITENNAFAERIVAYAAVEGILFSGSFCALFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DF C +Y L+ KL E V+ ++KEAV +ER F+CD+LP
Sbjct: 196 GLMPGLTFSNELISRDEGLHADFGCFIYQNLKHKLPNEAVQQIIKEAVIVERSFICDSLP 255
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN +LM QYIEFVADRLL LG +Y V NPFDWM+LIS+QGKTNFFEKRVGEY
Sbjct: 256 CDLIGMNSQLMIQYIEFVADRLLKLLGVPPVYNVTNPFDWMDLISVQGKTNFFEKRVGEY 315
Query: 306 QKASVMSSLN 315
QKA +M++ N
Sbjct: 316 QKAGIMANQN 325
>gi|392593078|gb|EIW82404.1| ribonucleotide reductase small subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 413
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/314 (67%), Positives = 253/314 (80%), Gaps = 2/314 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W L +E+HF+
Sbjct: 88 EEPLLKESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNNNERHFI 147
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 148 SHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 207
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF A+ET+PCV +KA WAL WI D TFAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 208 AQREYLFDAVETIPCVKRKADWALRWISDQRSTFAERLVAFAAVEGIFFSGSFASIFWLK 267
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL++ ++ + E V+ ++ EAV IE+EF+ DA
Sbjct: 268 KRGLMPGLTFSNELISRDEGMHTDFACLLFTHMKRRPHPEVVRHIITEAVTIEQEFLTDA 327
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM +YIEFVADRLL ALG K+Y V NPFD+M++ISLQGKTNFFEKRV
Sbjct: 328 LPVALIGMNSKLMRRYIEFVADRLLVALGNDKVYNVTNPFDFMDMISLQGKTNFFEKRVS 387
Query: 304 EYQKASVMSSLNGN 317
+Y KA+V S + N
Sbjct: 388 DYSKANVNHSSSNN 401
>gi|291244313|ref|XP_002742041.1| PREDICTED: ribonucleotide reductase M2 polypeptide-like
[Saccoglossus kowalevskii]
Length = 463
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 258/325 (79%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EE LL PN DRF +FPI+Y IW+ YKKA+ASFWT EEVDL +DL W L +E+ F++
Sbjct: 142 EETLLKPNIDRFVVFPIKYQDIWKYYKKAQASFWTVEEVDLGKDLPDWVKLKEEERRFIS 201
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENL RF EVQVAEAR FYGFQIA+EN+HSEMYSLL++ YIK+ +
Sbjct: 202 HVLAFFAASDGIVLENLVQRFSQEVQVAEARCFYGFQIAMENVHSEMYSLLIDAYIKEQE 261
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK RLFHAI+ +PCV KKA WA+ WI E+ F ERL+AFA VEGIFFSG+F +IFW KK
Sbjct: 262 EKTRLFHAIDNMPCVKKKADWAIEWIQSEESSFGERLVAFAAVEGIFFSGAFASIFWFKK 321
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGL+PGLTFSNELISRDEGLHCDFACL++S L K S+ER++ ++ +AV+IE+EF +AL
Sbjct: 322 RGLLPGLTFSNELISRDEGLHCDFACLIFSHLTYKPSKERIRNIITQAVDIEKEFWNEAL 381
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM+ Y+EFVADRLL L K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 382 PVGLIGMNVTLMNYYVEFVADRLLLELNCDKVYHRENPFDFMENISLEGKTNFFEKRVGE 441
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA+VMS++N F +D DF
Sbjct: 442 YQKANVMSTVN---QRQEFTLDADF 463
>gi|45360749|ref|NP_989048.1| ribonucleotide reductase M2, gene 1 [Xenopus (Silurana) tropicalis]
gi|38174078|gb|AAH61353.1| ribonucleotide reductase M2 polypeptide [Xenopus (Silurana)
tropicalis]
Length = 378
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/313 (69%), Positives = 255/313 (81%), Gaps = 1/313 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P I +EPLL NP RF + PI+Y IW+MYKKAEASFWTAEEVDLS+DL HWEAL +E+
Sbjct: 54 PRIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLPHWEALKPEER 113
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F+++VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 114 YFISYVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 173
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI E F ER++AFA VEGIFFSGSF +IF
Sbjct: 174 KDPKEREFLFNAIETLPCVKKKAEWALRWISDREAPFCERIVAFAAVEGIFFSGSFASIF 233
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + K SE+RV+ ++ +AV+IE+EF+
Sbjct: 234 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFL 293
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN +LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 294 TEALPVELIGMNCKLMKQYIEFVADRLLLELGFKKIFKSENPFDFMENISLEGKTNFFEK 353
Query: 301 RVGEYQKASVMSS 313
+V EYQK VMS
Sbjct: 354 KVAEYQKMGVMSK 366
>gi|195401438|ref|XP_002059320.1| GJ18335 [Drosophila virilis]
gi|194142326|gb|EDW58732.1| GJ18335 [Drosophila virilis]
Length = 394
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/324 (65%), Positives = 255/324 (78%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W LT +E+HF++H
Sbjct: 75 EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWARLTDNERHFISH 134
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI+D +
Sbjct: 135 VLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQ 194
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AIET+P V +KA WAL+WI + F ER+IAFA VEGIFFSGSF +IFWLKKR
Sbjct: 195 RDYLFNAIETMPAVKRKADWALSWISSKAANFGERIIAFAAVEGIFFSGSFASIFWLKKR 254
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ ++ +AV IE+EF+ DALP
Sbjct: 255 GLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPCRERIIEIISDAVTIEQEFLTDALP 314
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMS+YIEFVADRLL LG GKLY NPF +ME+ISL GKTNFFEK+VGEY
Sbjct: 315 VNLIGMNCALMSEYIEFVADRLLVELGVGKLYNTKNPFTFMEMISLDGKTNFFEKKVGEY 374
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
Q+ V S N ++VF +D DF
Sbjct: 375 QRMGVTS----NRLDNVFTLDADF 394
>gi|390349734|ref|XP_798682.3| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2-like [Strongylocentrotus
purpuratus]
Length = 516
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 211/325 (64%), Positives = 253/325 (77%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL PN RF +FPI+YP +W+ YK+A ASFWT EEVDL +D + W+ L +EKHFVT
Sbjct: 195 DEPLLTPNAQRFVLFPIKYPDVWKFYKRAMASFWTTEEVDLGEDWKDWQKLKPEEKHFVT 254
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+ EA+ FYGFQIA+ENIHSEMYSLL++TY+KD
Sbjct: 255 HVLAFFAASDGIVNENLVERFSQEVQIPEAKCFYGFQIAMENIHSEMYSLLIDTYVKDPT 314
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+RLF+AI+T+P V KKA WAL WI E TFAERL+AFA VEGIFFSGSF AIFW KK
Sbjct: 315 EKHRLFNAIQTMPFVKKKADWALKWIASDESTFAERLVAFAAVEGIFFSGSFAAIFWFKK 374
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGL+PGLTFSNELISRDEGLHCDFACLL+S L R++ ++++AV +E E++ +AL
Sbjct: 375 RGLLPGLTFSNELISRDEGLHCDFACLLFSHLNHPTPVSRIQEIIRDAVRLEEEYLSEAL 434
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYI+FVADRLL L +Y NPFD+ME ISL+GK+NFFEKRVGE
Sbjct: 435 PVALIGMNARLMCQYIQFVADRLLMELKMSTIYKALNPFDFMENISLEGKSNFFEKRVGE 494
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK +VM+ H F +D DF
Sbjct: 495 YQKMNVMTP---ELXRHTFTLDADF 516
>gi|310798394|gb|EFQ33287.1| ribonucleotide reductase [Glomerella graminicola M1.001]
Length = 413
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/346 (63%), Positives = 267/346 (77%), Gaps = 19/346 (5%)
Query: 1 MPSIPE----EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-A 55
+P I E EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W
Sbjct: 70 VPGIKEQEMDEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNK 129
Query: 56 LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSL 115
+ DEK+F++H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSL
Sbjct: 130 INEDEKYFISHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSL 189
Query: 116 LLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSG 174
L++TYIK+ ++ LF+AI+T+PC+ KKA WAL WI D +FA+RL+AFA VEGIFFSG
Sbjct: 190 LIDTYIKEPAQRTYLFNAIDTIPCIRKKADWALKWISDEKSSFAQRLVAFAAVEGIFFSG 249
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVE 234
+F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLLYS L+ + S++ ++ ++ +AV+
Sbjct: 250 AFASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKNRPSKQVIQDIIVDAVQ 309
Query: 235 IEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGK 294
IE+EF+ +ALPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GK
Sbjct: 310 IEQEFLTEALPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYKSSNPFDFMENISLGGK 369
Query: 295 TNFFEKRVGEYQKASVMSSLNG-----------NGGNHVFKIDEDF 329
TNFFEKRV +YQKA VM+S NGG+ F DEDF
Sbjct: 370 TNFFEKRVADYQKAGVMNSTKKAQEETTEGKGENGGDFAF--DEDF 413
>gi|224007863|ref|XP_002292891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971753|gb|EED90087.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 297
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/301 (72%), Positives = 244/301 (81%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWTAEE+DL++DL+ W+ALTA+E+HFV+H+LAFFAASDGIV ENL G F TE
Sbjct: 1 MYKKAEASFWTAEEIDLAEDLKDWDALTANERHFVSHILAFFAASDGIVNENLTGNFSTE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
V EAR FYGFQIA+ENIHSE YSLL++TYIKDS EKN L +AIETVPCV KKA WAL
Sbjct: 61 VTSPEARCFYGFQIAVENIHSETYSLLIDTYIKDSTEKNHLLNAIETVPCVQKKAHWALK 120
Query: 150 WID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
W D G+ +FAER+IAFA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDAGNASFAERMIAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACLLYS L KL E R+ ++ AVEIE+EFV DALP L+GMN +LM YIEF ADRLL
Sbjct: 181 ACLLYSKLVNKLPESRITKIITVAVEIEKEFVSDALPVELIGMNSKLMCDYIEFCADRLL 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
GALG K Y NPF+WME+ISLQGKTNFFEKRVGEY K+ V N + VF D D
Sbjct: 241 GALGCSKFYNATNPFEWMEMISLQGKTNFFEKRVGEYAKSGV----GVNKDDQVFCTDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|403418122|emb|CCM04822.1| predicted protein [Fibroporia radiculosa]
Length = 385
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/337 (66%), Positives = 255/337 (75%), Gaps = 11/337 (3%)
Query: 4 IPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
+PE EPLL + RF +FPIQY IW+MYKKAEASFWTAEE+DLS DL W + L DE
Sbjct: 49 LPEYLEPLLTESKRRFVLFPIQYHDIWQMYKKAEASFWTAEEIDLSHDLWDWKDRLNDDE 108
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K+F++HVLAFFAASDGIV ENL RF EVQVAEAR FYGFQI IENIHSE YSLLL+TY
Sbjct: 109 KYFISHVLAFFAASDGIVNENLVDRFSNEVQVAEARCFYGFQIMIENIHSETYSLLLDTY 168
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD ++ LF AIET+PC+ KKA WAL WI D +FAERL+AFA VEGIFFSGSF +I
Sbjct: 169 IKDQKQRAHLFDAIETIPCIKKKADWALRWIADKQSSFAERLVAFAAVEGIFFSGSFASI 228
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLT+SNELI RDEG+H DFACLLY LR +L + A++ EAV IE+EF
Sbjct: 229 FWLKKRGLMPGLTYSNELIIRDEGMHTDFACLLYHHLRRRLHPSVILAIITEAVIIEQEF 288
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN LM QYIEFVADRLL LG Y NPFD+M++ISLQGKTNFFE
Sbjct: 289 LTEALPCALIGMNVRLMCQYIEFVADRLLTTLGNKNYYHSTNPFDFMDMISLQGKTNFFE 348
Query: 300 KRVGEYQKASVMSSLNGNG-------GNHVFKIDEDF 329
KRV EY A + SS NG VF +DEDF
Sbjct: 349 KRVSEYAMAGLHSSANGTNTLTESTHTTRVFSLDEDF 385
>gi|322709430|gb|EFZ01006.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
anisopliae ARSEF 23]
Length = 414
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/310 (67%), Positives = 256/310 (82%), Gaps = 2/310 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DEK+F+
Sbjct: 80 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKYFI 139
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK++
Sbjct: 140 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEN 199
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 200 AQRTYLFNAIDTIPCIRKKADWAIRWIQDKESTFAQRLVAFAAVEGIFFSGAFASIFWLK 259
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S++ + ++ +AV IE+EF+ +A
Sbjct: 260 KRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKQVIYDIITDAVAIEQEFLTEA 319
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKTNFFEKRVG
Sbjct: 320 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKTSNPFDFMENISLGGKTNFFEKRVG 379
Query: 304 EYQKASVMSS 313
+YQKA V++S
Sbjct: 380 DYQKAGVLAS 389
>gi|187607401|ref|NP_001119973.1| ribonucleotide reductase M2 B (TP53 inducible) [Xenopus (Silurana)
tropicalis]
gi|165971068|gb|AAI58191.1| LOC100144925 protein [Xenopus (Silurana) tropicalis]
Length = 346
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 218/325 (67%), Positives = 253/325 (77%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEP L NP RF +FPI YP IW+MYKKA+ASFWTAEEVDLS+DL HWE L +E++F++
Sbjct: 26 EEPFLRKNPQRFVIFPIHYPDIWKMYKKAQASFWTAEEVDLSKDLVHWEKLKPEERNFIS 85
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL+ETYIKD
Sbjct: 86 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIETYIKDPR 145
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ LF+AIET+PCV KKA WAL WI D +F ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 146 RREFLFNAIETMPCVRKKAQWALRWISDRKASFGERVVAFAAVEGIFFSGSFAAIFWLKK 205
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACL++ L K +EERV ++ AV IE+EF+ +AL
Sbjct: 206 RGLMPGLTFSNELISRDEGLHTDFACLMFHYLVKKPTEERVTEIIVNAVRIEQEFLTEAL 265
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM YIEFVADRLL LG K + NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 266 PVSLIGMNCTLMKTYIEFVADRLLVELGCSKAFKAENPFDFMENISLEGKTNFFEKRVSE 325
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 326 YQRFAVMAHTEDN----VFTLDADF 346
>gi|404450556|ref|ZP_11015537.1| ribonucleotide reductase subunit beta [Indibacter alkaliphilus LW1]
gi|403763776|gb|EJZ24719.1| ribonucleotide reductase subunit beta [Indibacter alkaliphilus LW1]
Length = 326
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/308 (69%), Positives = 252/308 (81%), Gaps = 2/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N RF +FPIQ+ IW+ YKKAEASFWTAEE+DLSQDL+ W+ L E+HF++H
Sbjct: 5 EPILQENSGRFVLFPIQHDDIWQYYKKAEASFWTAEEIDLSQDLKDWKNLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F++EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIKD+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDNVE 124
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+++L +AIE + CV KKA WAL WID TF ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKADWALRWIDNG-TFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLHCDFAC LY+ + L +E V ++K AVEIE+EFV DALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTKHVNNTLPKETVTEIIKNAVEIEKEFVTDALP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL LG K++ NPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVELGCSKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSS 313
QKA VM+S
Sbjct: 304 QKAGVMNS 311
>gi|322693757|gb|EFY85606.1| ribonucleoside-diphosphate reductase M2 subunit [Metarhizium
acridum CQMa 102]
Length = 411
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 209/310 (67%), Positives = 256/310 (82%), Gaps = 2/310 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DEK+F+
Sbjct: 77 DEPLLQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDEKYFI 136
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK++
Sbjct: 137 SHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKEN 196
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 197 AQRTYLFNAIDTIPCIRKKADWAIRWIQDKESTFAQRLVAFAAVEGIFFSGAFASIFWLK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S++ + ++ +AV IE+EF+ +A
Sbjct: 257 KRGLMPGLTFSNELISRDEGLHTDFACLLHSHLKNRASKQIIHDIITDAVAIEKEFLTEA 316
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y +NPFD+ME ISL GKTNFFEKRVG
Sbjct: 317 LPCALLGMNSNLMKQYIEFVADRLLVALGNEKVYKTSNPFDFMENISLGGKTNFFEKRVG 376
Query: 304 EYQKASVMSS 313
+YQKA V++S
Sbjct: 377 DYQKAGVLAS 386
>gi|323450429|gb|EGB06310.1| hypothetical protein AURANDRAFT_65685 [Aureococcus anophagefferens]
Length = 349
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/306 (70%), Positives = 246/306 (80%), Gaps = 2/306 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EPLL +P RF +FPI++ +W+MYKKAEASFWTAEE+DL D++ W + L E+HF+
Sbjct: 29 EPLLTEDPHRFVLFPIEHDDVWQMYKKAEASFWTAEEIDLCHDIKDWDQKLNDKERHFIK 88
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA F TEVQ AEAR FYGFQIAIENIHSE+YSLL++TYI+D+
Sbjct: 89 HVLAFFAASDGIVNENLAQNFATEVQWAEARCFYGFQIAIENIHSEVYSLLIDTYIRDAK 148
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+ AI+T+PCV KKA WAL W D +FAER+IAFA VEGIFFSGSFCA+FWLKK
Sbjct: 149 EKHECLTAIDTMPCVTKKAQWALRWCDPDRASFAERIIAFAAVEGIFFSGSFCAVFWLKK 208
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGL+FSNELISRDEG+HCDFACLLYS LR KL E + AL+ +AV IE+EFV AL
Sbjct: 209 RGLMPGLSFSNELISRDEGMHCDFACLLYSKLRNKLPVETINALIGDAVTIEKEFVVSAL 268
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN M QYIEF ADRLL ALG KLY NPFDWMELISLQGKTNFFEKRVGE
Sbjct: 269 PVELIGMNSRTMCQYIEFCADRLLLALGCPKLYEATNPFDWMELISLQGKTNFFEKRVGE 328
Query: 305 YQKASV 310
Y K+ V
Sbjct: 329 YAKSGV 334
>gi|302678465|ref|XP_003028915.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
gi|300102604|gb|EFI94012.1| hypothetical protein SCHCODRAFT_83117 [Schizophyllum commune H4-8]
Length = 331
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/331 (64%), Positives = 262/331 (79%), Gaps = 2/331 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
MP EEPLL + RF +FPIQYP+IW+MYKKAEASFWTAEE+DLS+DL W+ + +
Sbjct: 1 MPYASEEPLLKESIRRFVLFPIQYPEIWQMYKKAEASFWTAEEMDLSKDLHDWQNRMNDN 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++T
Sbjct: 61 ERHFISHVLAFFAASDGIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCA 178
YI+++ E+ LF+A+ET+PCVA+KA WAL WI D +F RL+AFA VEGIFFSGSF +
Sbjct: 121 YIREAAEREHLFNAVETIPCVARKAQWALRWINDDRSSFGIRLVAFAAVEGIFFSGSFAS 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWLKKRGLMPGLTFSNELI+RDEG+H DFACLL++ LR + + V+ ++ EAV IE+E
Sbjct: 181 IFWLKKRGLMPGLTFSNELITRDEGMHTDFACLLFAHLRRRPHPDVVRRIIMEAVTIEQE 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+ DALP +L+GMN LM QYIEFVADRLL ALG K+Y V NPFD+M++ISLQGKTNFF
Sbjct: 241 FLTDALPVSLIGMNSTLMCQYIEFVADRLLVALGNEKVYNVTNPFDFMDMISLQGKTNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
EKRV +Y+ A+V ++ F +DEDF
Sbjct: 301 EKRVSDYKMAAVNNTGEVKSSGKTFVLDEDF 331
>gi|348588881|ref|XP_003480193.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Cavia porcellus]
Length = 351
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 259/325 (79%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +EK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI++ +
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIREPE 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 QRDFLFNAIETMPFVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGL+PGLTFSNELISRDEGLHCDFACL++ L K S RV+ ++ +AV IE+EF+ +AL
Sbjct: 211 RGLLPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSAARVREIIVDAVRIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCELMKQYIEFVADRLLVELGFSKVFEAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N +F +D DF
Sbjct: 331 YQRFAVMAETTDN----IFTLDADF 351
>gi|353237098|emb|CCA69079.1| probable small subunit of ribonucleotide reductase [Piriformospora
indica DSM 11827]
Length = 390
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/335 (65%), Positives = 254/335 (75%), Gaps = 11/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL WE L +E+HF+
Sbjct: 56 DEPLLKESQRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWENKLNDNERHFI 115
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD+
Sbjct: 116 SHVLAFFAASDGIVNENLVERFSAEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDA 175
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AIE +PC+ +KA WAL WI D TF ERLIAFA VEGIFFSGSF AIFWLK
Sbjct: 176 AQREYLFDAIENIPCIKRKADWALRWISDRRSTFGERLIAFAAVEGIFFSGSFAAIFWLK 235
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+ LR + E VK ++ EAV IE+EF+ DA
Sbjct: 236 KRGLMPGLTFSNELISRDEGMHTDFACLLFGHLRKRPHPETVKRIITEAVTIEQEFLTDA 295
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K+Y V NPFD+M++ISLQGKTNFFEKRV
Sbjct: 296 LPVSLIGMNATLMRQYIEFVADRLLVALGNDKVYNVTNPFDFMDMISLQGKTNFFEKRVS 355
Query: 304 EYQKASVMSSL---------NGNGGNHVFKIDEDF 329
+Y KA V S F +DEDF
Sbjct: 356 DYAKAGVNQSAARTKDDDNSTAVANKGAFVLDEDF 390
>gi|77748199|gb|AAI06683.1| MGC78958 protein [Xenopus laevis]
Length = 406
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 260/329 (79%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P I +EPLL NP RF + PI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWE L +E+
Sbjct: 82 PLIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEER 141
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F+++VLAFFAASDGIV ENL RF EVQV E R FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 142 YFISYVLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTYI 201
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA W+L WI E + ERL+AFA VEGIFFSGSF +IF
Sbjct: 202 KDPKEREFLFNAIETLPCVKKKAEWSLRWISDREAPYCERLVAFAAVEGIFFSGSFASIF 261
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + K SE+RV+ ++ +AV+IE+EF+
Sbjct: 262 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFL 321
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 322 IEALPVELIGMNCTLMKQYIEFVADRLLLELGFKKIFKSENPFDFMENISLEGKTNFFEK 381
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VM+ N F ++ DF
Sbjct: 382 KVGEYQKMGVMAKATENQ----FTLNADF 406
>gi|345568467|gb|EGX51361.1| hypothetical protein AOL_s00054g431 [Arthrobotrys oligospora ATCC
24927]
Length = 402
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/313 (67%), Positives = 251/313 (80%), Gaps = 2/313 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P +EPLL N RF +FPI Y ++W+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 52 PEEADEPLLVENKKRFVLFPINYHEVWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDE 111
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 112 RYFISHVLAFFAASDGIVNENLVQRFSNEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 171
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKDS ++ LF AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF AI
Sbjct: 172 IKDSSQRTYLFDAIDTIPCIKKKADWAIRWIEDEQSTFAQRLVAFAAVEGIFFSGSFAAI 231
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S+ V+A++ EAV IE+EF
Sbjct: 232 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKADVEAVITEAVTIEQEF 291
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPC L+G+N +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 292 LTEALPCPLLGINAKLMKQYIEFVADRLLIALGNPKVYHSTNPFDFMETISLAGKTNFFE 351
Query: 300 KRVGEYQKASVMS 312
KRV +YQKA VM+
Sbjct: 352 KRVSDYQKAGVMA 364
>gi|156387375|ref|XP_001634179.1| predicted protein [Nematostella vectensis]
gi|156221259|gb|EDO42116.1| predicted protein [Nematostella vectensis]
Length = 384
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/325 (68%), Positives = 254/325 (78%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF + PIQY +IW+MYKKAEASFWTAEEVDLS+D + L E+ FV+
Sbjct: 64 DEPLLRENPHRFVILPIQYTEIWQMYKKAEASFWTAEEVDLSKDSHDFAKLNDHERMFVS 123
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL F EVQ+ EAR FYGFQIAIENIHSEMYSLL+E+ IKD
Sbjct: 124 HVLAFFAASDGIVNENLVECFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIESLIKDKA 183
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK LF+AIET+PCV KKA WALNWI+ +F ER+IAFA VEGIFFSGSF AIFWLKK
Sbjct: 184 EKVNLFNAIETMPCVMKKAHWALNWINPQRASFGERIIAFAAVEGIFFSGSFAAIFWLKK 243
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL+Y L K EE V+ ++K+AV IE+EF+ AL
Sbjct: 244 RGLMPGLTFSNELISRDEGLHCDFACLMYKYLVNKPDEETVRGIIKDAVVIEQEFLTSAL 303
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL AL K+Y NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 304 PVKLIGMNCALMRQYIEFVADRLLVALNCQKVYNAENPFDFMENISLEGKTNFFEKRVGE 363
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VMS + +H F +++ F
Sbjct: 364 YQKSGVMS----DKDSHKFSLEDKF 384
>gi|440751431|ref|ZP_20930664.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Mariniradius saccharolyticus AK6]
gi|436480073|gb|ELP36338.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Mariniradius saccharolyticus AK6]
Length = 326
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 254/324 (78%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N DRF +FPIQ+ IW+ YKKAEASFWTAEE+DLSQDLR W+ L E+HF++H
Sbjct: 5 EPILQENKDRFVLFPIQHDDIWKFYKKAEASFWTAEEIDLSQDLRDWKNLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIKD+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKDAVE 124
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++RL HAIE + C+ KKA WAL WID F ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDRLLHAIEHIDCIKKKAEWALRWIDNG-NFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLHCDFAC LY+ + L +E V ++ +AV IE+EFV DALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTKHVVNHLPKETVTRIIMDAVAIEKEFVTDALP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL L K++ NPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVELDCAKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM S N F I EDF
Sbjct: 304 QKAGVMKSKETVEVNR-FSIGEDF 326
>gi|212533263|ref|XP_002146788.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
marneffei ATCC 18224]
gi|210072152|gb|EEA26241.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
marneffei ATCC 18224]
Length = 406
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/333 (65%), Positives = 259/333 (77%), Gaps = 6/333 (1%)
Query: 2 PSIPE----EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-AL 56
PSI E EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L
Sbjct: 64 PSIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRL 123
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
DE++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL
Sbjct: 124 NDDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLL 183
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYI + ++ LF AI+ +PC+ KKA WAL WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 184 IDTYINEPKQRTYLFDAIDNIPCIRKKADWALRWISDKESTFAQRLVAFAAVEGIFFSGS 243
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFAC+L+S L T+ + + ++ ++ +AV I
Sbjct: 244 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACMLFSHLNTRPNPKVIEDIIVDAVAI 303
Query: 236 EREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKT 295
E+EF+ DALPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKT
Sbjct: 304 EQEFLTDALPCALLGMNSKLMCQYIEFVADRLLVALGNKKYYNATNPFDFMENISLAGKT 363
Query: 296 NFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
NFFEKRVG+YQKA VM+S + K DE+
Sbjct: 364 NFFEKRVGDYQKAGVMNSTKKDKEATTEKKDEN 396
>gi|395328927|gb|EJF61317.1| hypothetical protein DICSQDRAFT_61362 [Dichomitus squalens LYAD-421
SS1]
Length = 354
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/311 (68%), Positives = 252/311 (81%), Gaps = 4/311 (1%)
Query: 4 IPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
+PE EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 27 LPEHMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDDE 86
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 87 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 146
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD ++ LF AI+T+PC+ KKA WAL WI D TFAERL+AFA VEGIFFSGSF +I
Sbjct: 147 IKDPKQREHLFDAIDTIPCIKKKADWALRWISDKQSTFAERLVAFAAVEGIFFSGSFASI 206
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + + ++ ++ EAVEIE+EF
Sbjct: 207 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPDHIRKIITEAVEIEQEF 266
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALP AL+GMN +LM QYIEFVADRLL ALG K YGV NPFD+M++ISLQGKTNFFE
Sbjct: 267 LTDALPVALIGMNSKLMCQYIEFVADRLLVALGDEKHYGVTNPFDFMDMISLQGKTNFFE 326
Query: 300 KRVGEYQKASV 310
KRV +Y KA +
Sbjct: 327 KRVSDYSKAGI 337
>gi|124808087|ref|XP_001348226.1| ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
gi|23497116|gb|AAN36665.1|AE014816_50 ribonucleotide reductase small subunit [Plasmodium falciparum 3D7]
Length = 349
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 206/323 (63%), Positives = 252/323 (78%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL E+ V+ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ + VF ++ +F
Sbjct: 331 KSGVMAQ----RKDQVFCLNTEF 349
>gi|148232385|ref|NP_001085389.1| ribonucleotide reductase M2, gene 1 [Xenopus laevis]
gi|48735122|gb|AAH72071.1| MGC78958 protein [Xenopus laevis]
gi|370988477|dbj|BAL43553.1| ribonucleotide reductase M2 beta [Xenopus laevis]
Length = 406
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 259/329 (78%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P I +EPLL NP RF + PI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWE L +E+
Sbjct: 82 PLIQDEPLLRDNPGRFVILPIEYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKPEER 141
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F+ +VLAFFAASDGIV ENL RF EVQV E R FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 142 YFIAYVLAFFAASDGIVNENLVERFSQEVQVTEVRCFYGFQIAMENIHSEMYSLLIDTYI 201
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA W+L WI E + ERL+AFA VEGIFFSGSF +IF
Sbjct: 202 KDPKEREFLFNAIETLPCVKKKAEWSLRWISDREAPYCERLVAFAAVEGIFFSGSFASIF 261
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + K SE+RV+ ++ +AV+IE+EF+
Sbjct: 262 WLKKRGLMPGLTFSNELISRDEGLHTDFACLLFKHVVHKPSEQRVREIIIDAVKIEQEFL 321
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEK
Sbjct: 322 TEALPVELIGMNCTLMKQYIEFVADRLLLELGFKKIFKSENPFDFMENISLEGKTNFFEK 381
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQK VM+ N F ++ DF
Sbjct: 382 KVGEYQKMGVMAKATENQ----FTLNADF 406
>gi|237845387|ref|XP_002371991.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii ME49]
gi|211969655|gb|EEB04851.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii ME49]
gi|221501644|gb|EEE27410.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii VEG]
Length = 391
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/322 (68%), Positives = 257/322 (79%), Gaps = 4/322 (1%)
Query: 8 PLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHV 67
PLL NP R+ + PIQ+ IWEMYKK EASFWTAEE+DL+QD+ HWE L +EKHF+ +V
Sbjct: 74 PLLMANPHRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWETLGENEKHFIKYV 133
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
LAFFAASDGIVLENLA +F+TE+QV EARAFYGFQIA+ENIHSE YSLL++ YI+D +EK
Sbjct: 134 LAFFAASDGIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDEEEK 193
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
+LF A+ V VA KA WA WI+ FAERL+ FACVEGI FSGSFCAIFWLKKRGL
Sbjct: 194 LQLFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFCAIFWLKKRGL 253
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEGLH DFACLLYS L+ KL ++ V+ +V+EAV +ER F+C+ALP
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLPDKVVQDMVREAVTVERAFICEALPVD 313
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN M+QYIEFVADRLL +LG K++ NPFDWMELISLQGKTNFFEKRVGEYQK
Sbjct: 314 LIGMNNRSMAQYIEFVADRLLTSLGVPKIFFATNPFDWMELISLQGKTNFFEKRVGEYQK 373
Query: 308 ASVMSSLNGNGGNHVFKIDEDF 329
A VM+ + F +D DF
Sbjct: 374 AGVMA----DKDQQKFVLDADF 391
>gi|357628103|gb|EHJ77546.1| ribonucleoside-diphosphate reductase small chain [Danaus plexippus]
Length = 374
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/324 (67%), Positives = 257/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQYP IW+MYKKAEASFWT EEVDLS+DL WE+L E+HF+ H
Sbjct: 55 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWESLKDCERHFIKH 114
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYSLL++TYI+D E
Sbjct: 115 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 174
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AIET+PCV KKA WAL WI + TF ER++AFA VEGIFFSGSF +IFW+KKR
Sbjct: 175 RDFLFNAIETLPCVKKKADWALQWIASKTATFGERIVAFAAVEGIFFSGSFASIFWMKKR 234
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACL++ L K S++ V ++K+AV IE+EF+ DALP
Sbjct: 235 GLMPGLTFSNELISRDEGLHTDFACLMFKHLVQKPSKDCVLKIIKDAVVIEQEFLTDALP 294
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN ELMS YIEFVADRLL L K Y NPFD+M LISL+GKTNFFEK+VGEY
Sbjct: 295 VRLLGMNCELMSDYIEFVADRLLMELIGEKHYNTKNPFDFMNLISLEGKTNFFEKKVGEY 354
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM+ N ++VF +D +F
Sbjct: 355 QKWGVMA----NPDDNVFTLDAEF 374
>gi|221480670|gb|EEE19110.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Toxoplasma gondii GT1]
Length = 391
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/322 (68%), Positives = 257/322 (79%), Gaps = 4/322 (1%)
Query: 8 PLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHV 67
PLL NP R+ + PIQ+ IWEMYKK EASFWTAEE+DL+QD+ HWE L +EKHF+ +V
Sbjct: 74 PLLMANPHRWVILPIQHHAIWEMYKKQEASFWTAEEIDLAQDMTHWETLGENEKHFIKYV 133
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
LAFFAASDGIVLENLA +F+TE+QV EARAFYGFQIA+ENIHSE YSLL++ YI+D +EK
Sbjct: 134 LAFFAASDGIVLENLAEKFLTEIQVPEARAFYGFQIAMENIHSETYSLLIDQYIRDEEEK 193
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
+LF A+ V VA KA WA WI+ FAERL+ FACVEGI FSGSFCAIFWLKKRGL
Sbjct: 194 LQLFDAVHNVKAVAVKAAWAAMWINNRNCFAERLVGFACVEGILFSGSFCAIFWLKKRGL 253
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEGLH DFACLLYS L+ KL ++ V+ +V+EAV +ER F+C+ALP
Sbjct: 254 MPGLTFSNELISRDEGLHADFACLLYSQLKHKLPDKVVQDMVREAVTVERAFICEALPVD 313
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN M+QYIEFVADRLL +LG K++ NPFDWMELISLQGKTNFFEKRVGEYQK
Sbjct: 314 LIGMNNRSMAQYIEFVADRLLTSLGVPKIFFATNPFDWMELISLQGKTNFFEKRVGEYQK 373
Query: 308 ASVMSSLNGNGGNHVFKIDEDF 329
A VM+ + F +D DF
Sbjct: 374 AGVMA----DKDQQKFVLDADF 391
>gi|298707394|emb|CBJ30029.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 380
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 255/328 (77%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EPLL NP RF +FPIQ ++W+MYKKAEA FWTAEE+DL+ D + WE LT DE+H
Sbjct: 57 TLKPEPLLVENPGRFVLFPIQDNEVWQMYKKAEACFWTAEELDLAHDHKDWEGLTDDERH 116
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
FV HVLAFFAASDGIV ENLA F +E+Q++EAR FYGFQIAIENIHSE+YSLL++TY+K
Sbjct: 117 FVKHVLAFFAASDGIVNENLASNFSSEIQLSEARCFYGFQIAIENIHSEVYSLLIDTYVK 176
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFW 181
D+ EK LF+A+ETVPCV +KA WAL W D ++AERL+AFA VEGIFFSGSFCA+FW
Sbjct: 177 DAAEKTHLFNAMETVPCVRRKARWALRWCDPKLASYAERLVAFAAVEGIFFSGSFCAVFW 236
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGL FSNELISRDEGLH DFACLL+ L KL ERV ++ +AV+IE+EF+
Sbjct: 237 LKKRGLMPGLCFSNELISRDEGLHTDFACLLFRKLVNKLPVERVAEIICDAVDIEKEFIT 296
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
ALP L+GMN LM QYIEF ADRLL LG K Y NPFDWME+ISLQGKTNFFEKR
Sbjct: 297 SALPVELIGMNSALMRQYIEFCADRLLMELGCEKKYNSTNPFDWMEMISLQGKTNFFEKR 356
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEY K+ V + + F ++ DF
Sbjct: 357 VGEYSKSGV----GVDAADQEFTLEADF 380
>gi|390601337|gb|EIN10731.1| beta subunit of ribonucleotide reductase [Punctularia
strigosozonata HHB-11173 SS5]
Length = 426
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 216/315 (68%), Positives = 253/315 (80%), Gaps = 2/315 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W L +E+HF+
Sbjct: 98 QEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDNERHFI 157
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 158 SHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 217
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+++ LF AIET+PCV +KA WA+ WI D FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 218 AQRDYLFDAIETIPCVKRKADWAIRWINDQRSGFAERLVAFAAVEGIFFSGSFASIFWLK 277
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + E VKA++ EAV IE+EF+ DA
Sbjct: 278 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRRRPHPEVVKAIIVEAVGIEQEFLTDA 337
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM QYIEFVADRLL ALG K Y V NPFD+M++ISLQGKTNFFEKRV
Sbjct: 338 LPVALIGMNAKLMCQYIEFVADRLLVALGGEKHYNVTNPFDFMDMISLQGKTNFFEKRVS 397
Query: 304 EYQKASVMSSLNGNG 318
+Y KA V +S +G
Sbjct: 398 DYSKAGVATSKHGQA 412
>gi|453087864|gb|EMF15905.1| Ribonuc_red_sm-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 416
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/310 (69%), Positives = 251/310 (80%), Gaps = 2/310 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EPLLA NP RF +FPI+Y +IW MYKKAEASFWTAEE+DLS+DL W + LT DE+ F++
Sbjct: 78 EPLLAENPQRFVLFPIKYHEIWNMYKKAEASFWTAEEIDLSKDLHDWNKRLTDDERFFIS 137
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EV V EAR FYGFQI +ENIHSE YSLL++TYI +
Sbjct: 138 HVLAFFAASDGIVNENLVERFSAEVTVPEARCFYGFQIMMENIHSETYSLLIDTYISEPK 197
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AI+ +PC+ +KA WAL WI D S TFA RLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 198 QRTYLFNAIDNIPCIRRKADWALRWISDKSSTFAMRLIAFAAVEGIFFSGSFASIFWLKK 257
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEG+H DFACLL+S L+ K S+ V++++ EAV IE+EF+ DAL
Sbjct: 258 RGLMPGLTFSNELISRDEGMHTDFACLLFSHLKKKPSKAVVQSIIVEAVAIEQEFLTDAL 317
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 318 PCALLGMNAKLMCQYIEFVADRLLLALGNQKFYNATNPFDFMENISLGGKTNFFEKRVGD 377
Query: 305 YQKASVMSSL 314
YQKA VM +
Sbjct: 378 YQKAGVMEGI 387
>gi|187903099|ref|YP_001883390.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
domestica salivary gland hypertrophy virus]
gi|187384748|gb|ACD03521.1| ribonucleoside diphosphate reductase small subunit, rr2 [Musca
domestica salivary gland hypertrophy virus]
Length = 343
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/327 (66%), Positives = 260/327 (79%), Gaps = 4/327 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPI+Y IW MYKKAEASFWT EEVDLS+D+ WE L++ E+HF+ H
Sbjct: 17 EPLLQENPRRFVLFPIEYEDIWRMYKKAEASFWTVEEVDLSKDMNDWERLSSGEQHFIKH 76
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV+EAR FYGFQIA+EN+HSEMYS+L++TYI++ E
Sbjct: 77 VLAFFAASDGIVNENLLERFAQEVQVSEARCFYGFQIAMENVHSEMYSVLIDTYIRERAE 136
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ RLF+AIET+P V +KA WA NWI + TF ERL+AFA VEG+FFSGSF AIFWLKKR
Sbjct: 137 RERLFNAIETIPAVKRKADWAFNWITSTTATFGERLLAFAVVEGVFFSGSFAAIFWLKKR 196
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA LL+ L + SEERV +V+EAV IE+EF+ DAL
Sbjct: 197 GLMPGLTFSNELISRDEGMHCDFAVLLFKRYLVNRPSEERVGEIVREAVTIEQEFLTDAL 256
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LMSQYIEFVADRLL LG ++Y NPFD+M++ISL GKTNFFEKRVG+
Sbjct: 257 PVSLIGMNCGLMSQYIEFVADRLLVDLGMKRIYNTKNPFDFMDMISLDGKTNFFEKRVGD 316
Query: 305 YQKASVMSS--LNGNGGNHVFKIDEDF 329
YQ+ V S G+ G+ F++D DF
Sbjct: 317 YQRLGVAKSNRGGGDDGDDTFRLDVDF 343
>gi|311748425|ref|ZP_07722210.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
sp. PR1]
gi|126576938|gb|EAZ81186.1| ribonucleoside-diphosphate reductase, beta subunit [Algoriphagus
sp. PR1]
Length = 326
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/327 (65%), Positives = 259/327 (79%), Gaps = 2/327 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +EP+L+ N +RF +FPIQ+ IWE YKKAEASFWTAEE+DL QD+ W++L E+HF
Sbjct: 1 MQQEPILSENKNRFVLFPIQHADIWEYYKKAEASFWTAEEIDLGQDMVDWKSLNDGERHF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIKD
Sbjct: 61 ISHVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKD 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+++LF+AIE + CV KKA WAL WID F ERLIAFA VEGIFFSGSFC+IFWLK
Sbjct: 121 PSERDKLFNAIEHIDCVKKKADWALRWIDNG-NFQERLIAFAAVEGIFFSGSFCSIFWLK 179
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCD 242
KRGLMPGLTFSNELISRDEGLHCDFAC LY+ + L +E V+ ++ +AV+IE+EFV D
Sbjct: 180 KRGLMPGLTFSNELISRDEGLHCDFACHLYTKHVVNPLPKETVREIIIDAVKIEKEFVTD 239
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN +LM QYIEFVADRLL L K++ NPFD+M++ISLQGKTNFFEKRV
Sbjct: 240 ALPVRLIGMNSDLMCQYIEFVADRLLLELDCEKVWNSTNPFDFMDMISLQGKTNFFEKRV 299
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
G+YQKA VM S + + F I EDF
Sbjct: 300 GDYQKAGVMKSADSSDSKPRFSIGEDF 326
>gi|70936723|ref|XP_739266.1| ribonucleotide reductase small subunit [Plasmodium chabaudi
chabaudi]
gi|56516136|emb|CAH80811.1| ribonucleotide reductase small subunit, putative [Plasmodium
chabaudi chabaudi]
Length = 349
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 248/323 (76%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L RF + PI YP++W YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILNKESSRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YI+D E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQIIEAKKFYAFQIAVENIHSETYSLLIDNYIRDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P + KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL EE V+ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFSWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ VF ++ DF
Sbjct: 331 KSGVMAQ----RKEQVFSLNTDF 349
>gi|1710398|sp|P50650.1|RIR2_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|555613|gb|AAA50170.1| ribonucleotide reductase small subunit [Plasmodium falciparum]
Length = 349
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/306 (66%), Positives = 245/306 (80%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL E+ ++ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMS 312
K+ VM+
Sbjct: 331 KSGVMA 336
>gi|82538850|ref|XP_723858.1| ribonucleotide reductase small chain [Plasmodium yoelii yoelii
17XNL]
gi|145580416|pdb|2P1I|A Chain A, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580417|pdb|2P1I|B Chain B, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580418|pdb|2P1I|C Chain C, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580419|pdb|2P1I|D Chain D, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580420|pdb|2P1I|E Chain E, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580421|pdb|2P1I|F Chain F, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580422|pdb|2P1I|G Chain G, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|145580423|pdb|2P1I|H Chain H, Plasmodium Yoelii Ribonucleotide Reductase Subunit R2
(Py03671)
gi|23478298|gb|EAA15423.1| Ribonucleotide reductase, small chain [Plasmodium yoelii yoelii]
Length = 349
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/323 (63%), Positives = 249/323 (77%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L +RF + PI YP++W YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILNKESNRFTLHPIMYPEVWNFYKKAEASFWTAEEIDLSSDLKDFEKLNVNEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ EV++ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVEIIEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P + KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL E V+ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPENVVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ VF ++ DF
Sbjct: 331 KSGVMAQ----RKEQVFSLNTDF 349
>gi|390442956|ref|ZP_10230755.1| ribonucleotide reductase [Nitritalea halalkaliphila LW7]
gi|389667264|gb|EIM78687.1| ribonucleotide reductase [Nitritalea halalkaliphila LW7]
Length = 326
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 260/325 (80%), Gaps = 3/325 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L N +RF +FPIQ+ IW+ YKKAEASFWTAEE+DLSQDL W+ LT E+HF++
Sbjct: 4 QEPILQDNGNRFVLFPIQHNDIWQFYKKAEASFWTAEEIDLSQDLNDWKNLTDGERHFIS 63
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F++EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIK++
Sbjct: 64 HILAFFAASDGIVNENLAEHFVSEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNAQ 123
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E++ L +AIET+PCV KKA WAL WID +F ERLIAFA VEGIFFSGSFC++FWLKKR
Sbjct: 124 ERDYLLNAIETIPCVQKKADWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSLFWLKKR 182
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFAC LY+ + +L +E VK ++ +AV IE+EFV DAL
Sbjct: 183 GLMPGLTFSNELISRDEGLHCDFACHLYTKHVVNQLPKETVKKIIMDAVAIEKEFVTDAL 242
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM QYIEFVADRLL LG +++G +NPFD+M++ISL GKTNFFEKRVG+
Sbjct: 243 PVRLIGMNADLMCQYIEFVADRLLLELGNERVWGSSNPFDFMDMISLPGKTNFFEKRVGD 302
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM F I EDF
Sbjct: 303 YQKAGVMKK-EDTSDKPKFAIGEDF 326
>gi|425772246|gb|EKV10657.1| Ribonucleotide reductase small subunit RnrA, putative [Penicillium
digitatum Pd1]
gi|425777425|gb|EKV15599.1| Ribonucleotide reductase small subunit RnrA, putative [Penicillium
digitatum PHI26]
Length = 402
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/332 (65%), Positives = 256/332 (77%), Gaps = 9/332 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL NP RF MFPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F++
Sbjct: 71 EPLLQENPHRFVMFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDERYFIS 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI +
Sbjct: 131 HVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYINEPK 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+AKKA WAL WI D TFA RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 191 QRTYLFDAIDTIPCIAKKANWALRWISDHESTFASRLVAFAAVEGIFFSGSFASIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S + + + V+ ++ EAV IE+EF+ DAL
Sbjct: 251 RGLMPGLTFSNELISRDEGLHTDFACLLFSHMNHRPDPKLVQDIIVEAVGIEQEFLTDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC L+GMN +LM +YIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 311 PCGLLGMNSKLMCEYIEFVADRLLVALGNKKYYNATNPFDFMESISLAGKTNFFEKRVGD 370
Query: 305 YQKASVMSS----LNGNGGNHV---FKIDEDF 329
YQKA VM+S +N G V DEDF
Sbjct: 371 YQKAGVMASTKQEVNAEGEKVVSDGLNFDEDF 402
>gi|115387427|ref|XP_001211219.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
terreus NIH2624]
gi|114195303|gb|EAU37003.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
terreus NIH2624]
Length = 401
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/342 (64%), Positives = 261/342 (76%), Gaps = 17/342 (4%)
Query: 2 PSIPE----EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-AL 56
P I E EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L
Sbjct: 63 PGIKEMEANEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRL 122
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
DE++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIHSE YSLL
Sbjct: 123 NEDERYFISHVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMIENIHSETYSLL 182
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIK+ ++ LF AI+ +PC+AKKA WA+ WI D TF +RL+AFA VEGIFFSGS
Sbjct: 183 IDTYIKEPKQRTYLFDAIDNIPCIAKKADWAIKWIQDQESTFGQRLVAFAAVEGIFFSGS 242
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
F +IFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++ EAV I
Sbjct: 243 FASIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQVVEDIIVEAVAI 302
Query: 236 EREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKT 295
E+EF+ DALP AL+GMN +LM QYIEFVADRLL ALG K + NPFD+ME ISL GKT
Sbjct: 303 EKEFLTDALPVALLGMNSKLMCQYIEFVADRLLVALGNNKYFHSTNPFDFMESISLAGKT 362
Query: 296 NFFEKRVGEYQKASVMSS--------LNGNGGNHVFKIDEDF 329
NFFEKRVG+YQKA VM+S + +GG DEDF
Sbjct: 363 NFFEKRVGDYQKAGVMASTKKEAKEETSNDGG---LNFDEDF 401
>gi|91081999|ref|XP_969259.1| PREDICTED: similar to AGAP006818-PA [Tribolium castaneum]
gi|270007377|gb|EFA03825.1| hypothetical protein TcasGA2_TC013940 [Tribolium castaneum]
Length = 374
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/309 (68%), Positives = 255/309 (82%), Gaps = 3/309 (0%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKH 62
PE EPLL NP RF +FPIQYP IW+ YK+AEASFWT EEVDLS+DL W+ L +DE++
Sbjct: 52 PELEPLLQENPRRFVVFPIQYPDIWDKYKQAEASFWTTEEVDLSKDLDDWKNKLNSDERY 111
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIAIENIHSEMYS+L+ETYI
Sbjct: 112 FISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAIENIHSEMYSMLIETYIS 171
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFW 181
+ EK LF+AIET+PCV KKA WAL WI+ TF ER++AFA VEGIFFSGSF +IFW
Sbjct: 172 EPQEKEFLFNAIETLPCVKKKADWALLWINSKNATFGERIVAFAAVEGIFFSGSFASIFW 231
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKR LMPGLTFSNELISRDEGLHCDFACL++S L K S+ER+++++++AV+IE+EF+
Sbjct: 232 LKKRNLMPGLTFSNELISRDEGLHCDFACLMFSHLVQKPSKERIQSIIQDAVKIEKEFLT 291
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ALP +++GMN LM QYIEFVADRLLG LG K+Y NPFD+M +IS +GKTNFFEK+
Sbjct: 292 EALPVSMIGMNCALMCQYIEFVADRLLGELGCEKIYNSQNPFDFMTIISNEGKTNFFEKK 351
Query: 302 VGEYQKASV 310
VGEYQK+ V
Sbjct: 352 VGEYQKSGV 360
>gi|358054684|dbj|GAA99610.1| hypothetical protein E5Q_06311 [Mixia osmundae IAM 14324]
Length = 474
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/332 (63%), Positives = 260/332 (78%), Gaps = 8/332 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL +RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+D+ W+ L +E+HFV
Sbjct: 143 EEPLLQETANRFVLFPIKYNEIWQMYKKAEASFWTAEEMDLSKDMHDWDNKLNDNERHFV 202
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE+YSLL++TYI++
Sbjct: 203 SHVLAFFAASDGIVNENLVERFSGEVQAAEARCFYGFQIMMENIHSEVYSLLIDTYIREP 262
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+ RLF AI+T+PC+ +KA WAL WI D F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 263 KERTRLFEAIDTIPCIQRKAQWALKWISDEKSCFGERLVAFAAVEGIFFSGSFASIFWLK 322
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL+S LR + + V+ ++ +AV+IE+EF+ +A
Sbjct: 323 KRGLMPGLSFSNELISRDEGLHTDFACLLFSHLRRRPHPDTVQKIITDAVKIEKEFLTEA 382
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN ELM QYIEFVADRLL ALG ++ NPFD+ME ISLQGKTNFFEKRV
Sbjct: 383 LPVSLIGMNSELMCQYIEFVADRLLIALGNAPVWNTTNPFDFMENISLQGKTNFFEKRVS 442
Query: 304 EYQKASVMSSL------NGNGGNHVFKIDEDF 329
+Y KA +S N N +H+F ++EDF
Sbjct: 443 DYAKAGFSNSTKAGTAANENSDSHLFDLNEDF 474
>gi|9633651|ref|NP_051729.1| ribonucleotide reductase, small subunit [Myxoma virus]
gi|6523870|gb|AAF14903.1|AF170726_19 ribonucleotide reductase, small subunit [Myxoma virus]
gi|301134541|gb|ADK63655.1| M015L [Myxoma virus]
gi|408685181|gb|AFU77616.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685351|gb|AFU77785.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685685|gb|AFU78117.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685854|gb|AFU78285.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686189|gb|AFU78618.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686524|gb|AFU78951.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687028|gb|AFU79452.1| small subunit ribonucleotide reductase [Myxoma virus]
Length = 322
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/327 (65%), Positives = 257/327 (78%), Gaps = 6/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +EP+L + DR+ +FPIQY IW MYKKA ASFWT EEVD+S+DL+ W LT DEK+F
Sbjct: 1 MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+LAFFAASDGIV ENLA RF EVQ+AEAR FYGFQIA+ENIHSEMYSLL++TYI D
Sbjct: 61 IKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIID 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK +LF AIET+ C+ +KA W WI + T+AERLIAFA VEGIFFSGSF AIFWL
Sbjct: 121 LQEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRG MPGLTFSNELISRDEGLHCDFACL++ L+ SEERV +++KEAV IE+ F+ +
Sbjct: 181 KKRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTE 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN ELM QYIEFVADRL+ LGY K++ NPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 ALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSATNPFDFMENISLEGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ V+ + ++ F +DEDF
Sbjct: 301 SDYQRMGVV-----HKQDNTFSLDEDF 322
>gi|70997335|ref|XP_753417.1| ribonucleotide reductase small subunit RnrA [Aspergillus fumigatus
Af293]
gi|66851053|gb|EAL91379.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
fumigatus Af293]
gi|159126856|gb|EDP51972.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
fumigatus A1163]
Length = 405
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/333 (65%), Positives = 256/333 (76%), Gaps = 10/333 (3%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F++
Sbjct: 73 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFIS 132
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 133 HVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPK 192
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 193 QRTYLFDAIDTIPCIRKKAQWAMRWISDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + ++ ++ ++ EAV IE+EF+ DAL
Sbjct: 253 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNHRPDKKVIEDIIVEAVAIEQEFLTDAL 312
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM QYIEFVADRLL ALG K + NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 313 PVALLGMNSKLMCQYIEFVADRLLVALGNKKYFNSPNPFDFMESISLAGKTNFFEKRVGD 372
Query: 305 YQKASVMSSLNGNGGNHVFK--------IDEDF 329
YQKA VM+S + K DEDF
Sbjct: 373 YQKAGVMASTKKDASQDTAKDANDGGLCFDEDF 405
>gi|408673955|ref|YP_006873703.1| ribonucleotide reductase [Emticicia oligotrophica DSM 17448]
gi|387855579|gb|AFK03676.1| ribonucleotide reductase [Emticicia oligotrophica DSM 17448]
Length = 328
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/324 (65%), Positives = 260/324 (80%), Gaps = 6/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL + RF +FPI++ IWE YKK EASFWTAEE+DLS DL+ W L+ E+HF++H
Sbjct: 10 EPLLIEDKTRFVLFPIKHNDIWEFYKKHEASFWTAEEIDLSPDLQDWAKLSDGERHFISH 69
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F++ VQ AEA+ FYGFQI +ENIHSE YSLL++TYIKD+ E
Sbjct: 70 VLAFFAASDGIVNENLAVNFISRVQFAEAKCFYGFQIMMENIHSETYSLLIDTYIKDAVE 129
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
++++ +AI+ +PCV KKA WAL WI+ F +RL+AFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 130 RDKMLNAIDHIPCVKKKADWALKWIEQG-NFIDRLLAFAVVEGIFFSGSFCSIFWLKKRG 188
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFACLLY+ ++ K ++V +LV++AVEIE+EFV DALP
Sbjct: 189 LMPGLTFSNELISRDEGLHRDFACLLYTQYIQNKYPADKVYSLVRDAVEIEKEFVTDALP 248
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN ELM QYIEFVAD LL +LG K+Y ANPFD+M++ISLQGKTNFFEKRVGEY
Sbjct: 249 VSLIGMNAELMCQYIEFVADHLLESLGLNKIYNAANPFDFMDMISLQGKTNFFEKRVGEY 308
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK+ VMS + F +DEDF
Sbjct: 309 QKSGVMS----QKSDMAFSLDEDF 328
>gi|429863484|gb|ELA37935.1| ribonucleotide reductase small subunit [Colletotrichum
gloeosporioides Nara gc5]
Length = 413
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/340 (64%), Positives = 263/340 (77%), Gaps = 18/340 (5%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + DEK+F+
Sbjct: 76 DEPLLQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEKYFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 SHILAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WAL WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 196 AQRTYLFNAIDTIPCIRKKADWALRWITDTKSTFAQRLVAFAAVEGIFFSGAFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLLYS L+ + S++ ++ ++ +AV+IE+EF+ +A
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLYSHLKHRPSKQVIEDIIVDAVKIEQEFLTEA 315
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 316 LPCALLGMNSNLMKQYIEFVADRLLVALGNDKVYKSVNPFDFMENISLGGKTNFFEKRVA 375
Query: 304 EYQKASVMSSLNG--------------NGGNHVFKIDEDF 329
+YQKA VM+S NGG+ F DEDF
Sbjct: 376 DYQKAGVMNSAKKYQDESAGSSEEKGENGGDFCF--DEDF 413
>gi|408684509|gb|AFU76948.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408684676|gb|AFU77114.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408684843|gb|AFU77280.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685011|gb|AFU77447.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408685516|gb|AFU77949.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686019|gb|AFU78449.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686356|gb|AFU78784.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686691|gb|AFU79117.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408686859|gb|AFU79284.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687195|gb|AFU79618.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687363|gb|AFU79785.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687530|gb|AFU79951.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687698|gb|AFU80118.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408687866|gb|AFU80285.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408688034|gb|AFU80452.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|408688203|gb|AFU80620.1| small subunit ribonucleotide reductase [Myxoma virus]
Length = 322
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/327 (65%), Positives = 257/327 (78%), Gaps = 6/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +EP+L + DR+ +FPIQY IW MYKKA ASFWT EEVD+S+DL+ W LT DEK+F
Sbjct: 1 MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+LAFFAASDGIV ENLA RF EVQ+AEAR FYGFQIA+ENIHSEMYSLL++TYI D
Sbjct: 61 IKHILAFFAASDGIVNENLAERFYAEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIID 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK +LF AIET+ C+ +KA W WI + T+AERLIAFA VEGIFFSGSF AIFWL
Sbjct: 121 LQEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRG MPGLTFSNELISRDEGLHCDFACL++ L+ SEERV +++KEAV IE+ F+ +
Sbjct: 181 KKRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTE 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN ELM QYIEFVADRL+ LGY K++ NPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 ALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSATNPFDFMENISLEGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ V+ + ++ F +DEDF
Sbjct: 301 SDYQRMGVV-----HKQDNTFSLDEDF 322
>gi|410910828|ref|XP_003968892.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Takifugu rubripes]
Length = 360
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/324 (66%), Positives = 257/324 (79%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQYP IW+MYK+A+ASFWT EEVDLS+DL HW++L +EKHFV+H
Sbjct: 41 EPLLEENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHWDSLKHEEKHFVSH 100
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR+FY Q+ +E++HSEMYSLL+ TYI+D E
Sbjct: 101 VLAFFAASDGIVNENLVQRFCQEVQVPEARSFYSCQVLMESVHSEMYSLLINTYIRDLKE 160
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AI T+PCV +KA WAL+WI D + TF ERL+AFA VEGIFFSGSF +I+WLKKR
Sbjct: 161 RDYLFNAIHTMPCVKRKADWALHWINDRTSTFGERLVAFAAVEGIFFSGSFASIYWLKKR 220
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLT+SNELISRDEGLHC FACLL+S L K SE+RVK +V +AV IE+EF+ +ALP
Sbjct: 221 GLMPGLTYSNELISRDEGLHCTFACLLFSYLVKKPSEDRVKDIVTKAVSIEQEFLMEALP 280
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM QYIEFVADRL LG K+Y NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 281 VDLIGMNCCLMKQYIEFVADRLFADLGLAKVYHAENPFDFMESISLEGKTNFFEKRVAEY 340
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
Q+ +MSS + F +D DF
Sbjct: 341 QRFGIMSS----PMDSEFTLDADF 360
>gi|393245978|gb|EJD53487.1| ribonucleotide reductase small subunit [Auricularia delicata
TFB-10046 SS5]
Length = 410
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 261/334 (78%), Gaps = 10/334 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL WE L +E+HF+
Sbjct: 77 DEPLLTESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWENKLNDNERHFI 136
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 137 SHILAFFAASDGIVNENLVERFSNEVQCAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 196
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ +KA WAL WI D TF ERLIAFA VEGIFFSG+F +IFWLK
Sbjct: 197 ARRDYLFDAIDTIPCIKRKAEWALRWITDQDSTFGERLIAFAAVEGIFFSGAFASIFWLK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + + VK ++ EAV+IE+EF+ DA
Sbjct: 257 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRKRPHPDTVKMIITEAVKIEQEFLTDA 316
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM+QYIEFVADRLL ALG K Y +NPFD+M++ISLQGKTNFFEKRV
Sbjct: 317 LPVSLIGMNSKLMNQYIEFVADRLLVALGNEKHYNSSNPFDFMDMISLQGKTNFFEKRVS 376
Query: 304 EYQKASV-MSSLNG-------NGGNHVFKIDEDF 329
+Y KA V +S+ G + F +DEDF
Sbjct: 377 DYAKAGVNVSAAQGTDKAKTESSNVKTFSLDEDF 410
>gi|388581984|gb|EIM22290.1| ribonucleoside-diphosphate reductase small chain [Wallemia sebi CBS
633.66]
Length = 410
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/326 (65%), Positives = 258/326 (79%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+D+ W+ + DEKHF+
Sbjct: 86 DEPLLKENPRRFVLFPIQYTEIWQMYKKAEASFWTAEEMDLSKDITDWQNKINKDEKHFI 145
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF +EVQ+AEAR FYGFQI +ENIHSE YSLL++TYI ++
Sbjct: 146 SHVLAFFAASDGIVNENLLERFSSEVQLAEARCFYGFQIMMENIHSETYSLLIDTYIPEA 205
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++++ LF+AIET+PC+ +KA WA+ WI D +F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 206 EQRDYLFNAIETIPCIKRKADWAVKWINDEKASFGERLVAFAAVEGIFFSGSFASIFWLK 265
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+ L + + V+ ++ EAV IE+EF+ DA
Sbjct: 266 KRGLMPGLTFSNELISRDEGLHTDFACLLFGHLNRRPHPKVVEKIITEAVTIEQEFLSDA 325
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM QYIEFVADRLL +LG K Y NPFD+ME+ISLQGKTNFFEKRV
Sbjct: 326 LPVALIGMNAKLMCQYIEFVADRLLISLGNDKYYNATNPFDFMEMISLQGKTNFFEKRVS 385
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+Y KA V + G F +D DF
Sbjct: 386 DYAKAGVKADDTAGKGKE-FTLDADF 410
>gi|6525234|gb|AAF15363.1|AF205376_1 ribonucleotide reductase R2 subunit [Plasmodium falciparum]
Length = 320
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/321 (63%), Positives = 251/321 (78%), Gaps = 4/321 (1%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
+L DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKHVL 63
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFAASDGIVLENLA +F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E+
Sbjct: 64 AFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCAL 248
GLTFSNELISRDEGLH DF CL+YSLL KL E+ V+ +VKEAVE+ER F+C++LPC L
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAVEVERSFICESLPCDL 243
Query: 249 VGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQK+
Sbjct: 244 IGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQKS 303
Query: 309 SVMSSLNGNGGNHVFKIDEDF 329
VM+ + VF ++ +F
Sbjct: 304 GVMAQ----RKDQVFCLNTEF 320
>gi|302409182|ref|XP_003002425.1| ribonucleoside-diphosphate reductase small chain [Verticillium
albo-atrum VaMs.102]
gi|261358458|gb|EEY20886.1| ribonucleoside-diphosphate reductase small chain [Verticillium
albo-atrum VaMs.102]
Length = 414
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/337 (64%), Positives = 258/337 (76%), Gaps = 15/337 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + DEK+F+
Sbjct: 80 DEPLLRENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEKYFI 139
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 140 SHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 199
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WAL WI D TFA RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 200 AQRTYLFNAIDTIPCIRKKADWALTWITDKKSTFATRLVAFAVVEGIFFSGAFASIFWLK 259
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ +V +AV IE+EF+ +A
Sbjct: 260 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQTVQDIVTDAVNIEQEFLTEA 319
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPC L+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 320 LPCGLLGMNATLMKQYIEFVADRLLVALGNEKVYKATNPFDFMENISLGGKTNFFEKRVA 379
Query: 304 EYQKASVMSSLNG-----------NGGNHVFKIDEDF 329
+YQKA VM S NGG+ F D+DF
Sbjct: 380 DYQKAGVMGSTTKKEEEATEGKGENGGD--FSFDDDF 414
>gi|389747381|gb|EIM88560.1| ribonucleotide reductase small subunit [Stereum hirsutum FP-91666
SS1]
Length = 417
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/336 (65%), Positives = 261/336 (77%), Gaps = 10/336 (2%)
Query: 4 IPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
+PE EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W L +E
Sbjct: 82 LPERMEPLLMESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDNE 141
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF++HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 142 RHFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 201
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD E++ LF A+ET+PCV +KA WAL WI D TFAERL+AFA VEGIFFSGSF +I
Sbjct: 202 IKDPKERDYLFDAVETIPCVKRKADWALKWISDKRATFAERLVAFAAVEGIFFSGSFASI 261
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELI+RDEG+H DFACLL+S L+ + + V ++ +AV+IE+EF
Sbjct: 262 FWLKKRGLMPGLTFSNELITRDEGMHTDFACLLFSHLKKRPHPDTVLRIITDAVQIEQEF 321
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M++ISLQGKTNFFE
Sbjct: 322 LTDALPCALIGMNSKLMRQYIEFVADRLLLALGGNKHYNSTNPFDFMDMISLQGKTNFFE 381
Query: 300 KRVGEYQK------ASVMSSLNGNGGNHVFKIDEDF 329
KRV +Y K AS +S G+ F +DEDF
Sbjct: 382 KRVSDYAKAGVAASASGATSGPAAEGSKSFTLDEDF 417
>gi|67515571|ref|XP_657671.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
gi|40746089|gb|EAA65245.1| hypothetical protein AN0067.2 [Aspergillus nidulans FGSC A4]
gi|259489743|tpe|CBF90266.1| TPA: Ribonucleotide reductase [Source:UniProtKB/TrEMBL;Acc:Q9HEW8]
[Aspergillus nidulans FGSC A4]
Length = 406
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/337 (64%), Positives = 259/337 (76%), Gaps = 18/337 (5%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F++
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERYFIS 133
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIH+E YSLL++TYIK+
Sbjct: 134 RVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPK 193
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRTYLFDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++ EAV IE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNWRPSKKVVEDIIVEAVAIEKEFLTDAL 313
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN +LM QYIEFVADRLL ALG K + NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 314 PCALLGMNAKLMCQYIEFVADRLLVALGNKKYFNATNPFDFMESISLAGKTNFFEKRVGD 373
Query: 305 YQKASVMSSL------------NGNGGNHVFKIDEDF 329
YQKA VM+S +GNG DEDF
Sbjct: 374 YQKAGVMASTKKDPKQDETKTSDGNG----LSFDEDF 406
>gi|344272991|ref|XP_003408311.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B-like
[Loxodonta africana]
Length = 386
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/317 (67%), Positives = 254/317 (80%), Gaps = 3/317 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW LT+DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLTSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L + SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNRPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV +
Sbjct: 271 PVGLIGMNSVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSD 330
Query: 305 Y--QKASVMSSLNGNGG 319
+ + S +S + G G
Sbjct: 331 FMLEGDSDISEVLGRKG 347
>gi|296809816|ref|XP_002845246.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
gi|238842634|gb|EEQ32296.1| ribonucleotide reductase [Arthroderma otae CBS 113480]
Length = 405
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/335 (65%), Positives = 256/335 (76%), Gaps = 16/335 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL NP RF +FPI+Y EMYKKAEASFWTAEE+DLS+D+ W L DE+ F+
Sbjct: 76 EEPLLQENPQRFVLFPIKY---HEMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 132
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 133 SHVLAFFAASDGIVNENLLERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 192
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 193 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKDSTFAQRLVAFAAVEGIFFSGSFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+A++ EAV IE+EF+ DA
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPTAVEAIITEAVSIEQEFLTDA 312
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M+ ISL GKTNFFEKRVG
Sbjct: 313 LPCALLGMNAKLMCQYIEFVADRLLVALGNKKFYNTTNPFDFMDNISLAGKTNFFEKRVG 372
Query: 304 EYQKASVMSSLNG---------NGGNHVFKIDEDF 329
+YQKA VM+S NGG F+ DEDF
Sbjct: 373 DYQKAGVMASTKKEEDPSDEPENGG--AFRFDEDF 405
>gi|389745325|gb|EIM86506.1| ribonucleotide reductase small subunit [Stereum hirsutum FP-91666
SS1]
Length = 420
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/329 (66%), Positives = 258/329 (78%), Gaps = 6/329 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W L +E+HF++
Sbjct: 92 EPLLIESKRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDNERHFIS 151
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 152 HVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDPK 211
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF A+ET+PCV +KA WAL WI D FAERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 212 ERDYLFDAVETIPCVKRKADWALKWISDRRSCFAERLVAFAAVEGIFFSGSFASIFWLKK 271
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI+RDEG+H DFACLL+S ++ + + V+ ++ EAVEIE+EF+ DAL
Sbjct: 272 RGLMPGLTFSNELITRDEGMHTDFACLLFSHMKRRPHPDTVRRIISEAVEIEQEFLTDAL 331
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+M++ISLQGKTNFFEKRV +
Sbjct: 332 PCALIGMNSKLMRQYIEFVADRLLLALGGDKYYNSTNPFDFMDMISLQGKTNFFEKRVSD 391
Query: 305 YQKASVMSSLNGNG----GNHVFKIDEDF 329
Y KA V SS G + F +DEDF
Sbjct: 392 YAKAGVASSAANAGGAAETSKGFSVDEDF 420
>gi|121713826|ref|XP_001274524.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
clavatus NRRL 1]
gi|119402677|gb|EAW13098.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
clavatus NRRL 1]
Length = 405
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/333 (65%), Positives = 255/333 (76%), Gaps = 10/333 (3%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F++
Sbjct: 73 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFIS 132
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSE YSLL++TYIK+
Sbjct: 133 HVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMIENIHSETYSLLIDTYIKEPK 192
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+ KKA WA+ WI D +F +RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 193 QRAYLFDAIDTIPCINKKAQWAMRWISDKESSFGQRLVAFAAVEGIFFSGSFASIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + ++ V+ ++ EAV IE+EF+ DAL
Sbjct: 253 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPDKKVVEDIIVEAVAIEQEFLTDAL 312
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 313 PVALLGMNSKLMCQYIEFVADRLLVALGNKKYYNSPNPFDFMESISLAGKTNFFEKRVGD 372
Query: 305 YQKASVMSSLNGNGGNHVFK--------IDEDF 329
YQKA VM+S + K DEDF
Sbjct: 373 YQKAGVMASTKKDTNQDAAKDTNAGGLSFDEDF 405
>gi|170664480|gb|ACB28637.1| small subunit ribonucleotide reductase [Myxoma virus]
gi|170664652|gb|ACB28808.1| small subunit ribonucleotide reductase [recombinant virus
6918VP60-T2]
Length = 322
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/327 (64%), Positives = 257/327 (78%), Gaps = 6/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +EP+L + DR+ +FPIQY IW MYKKA ASFWT EEVD+S+DL+ W LT DEK+F
Sbjct: 1 MEDEPVLKESLDRYVVFPIQYNDIWNMYKKAVASFWTPEEVDISKDLKDWRVLTPDEKYF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+LAFFAASDGIV ENLA RF EVQ+AEAR FYGFQIA+ENIHSEMYSLL++TYI +
Sbjct: 61 IKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAMENIHSEMYSLLIDTYIIN 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK +LF AIET+ C+ +KA W WI + T+AERLIAFA VEGIFFSGSF AIFWL
Sbjct: 121 LQEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRG MPGLTFSNELISRDEGLHCDFACL++ L+ SEERV +++KEAV IE+ F+ +
Sbjct: 181 KKRGKMPGLTFSNELISRDEGLHCDFACLMFKHLKHTPSEERVASIIKEAVVIEQRFLTE 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN ELM QYIEFVADRL+ LGY K++ NPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 ALPVRLIGMNCELMCQYIEFVADRLIAELGYSKIFSATNPFDFMENISLEGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ V+ + ++ F +DEDF
Sbjct: 301 SDYQRMGVV-----HKQDNTFSLDEDF 322
>gi|346972025|gb|EGY15477.1| ribonucleoside-diphosphate reductase small chain [Verticillium
dahliae VdLs.17]
Length = 414
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/337 (64%), Positives = 258/337 (76%), Gaps = 15/337 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + DEK+F+
Sbjct: 80 DEPLLRENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNKINDDEKYFI 139
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 140 SHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 199
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WAL WI D TFA RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 200 AQRTYLFNAIDTIPCIRKKADWALTWITDKKSTFATRLVAFAVVEGIFFSGAFASIFWLK 259
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ +V +AV IE+EF+ +A
Sbjct: 260 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQTVQDIVTDAVTIEQEFLTEA 319
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPC L+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 320 LPCGLLGMNATLMKQYIEFVADRLLVALGNEKVYKATNPFDFMENISLGGKTNFFEKRVA 379
Query: 304 EYQKASVMSSLNG-----------NGGNHVFKIDEDF 329
+YQKA VM S NGG+ F D+DF
Sbjct: 380 DYQKAGVMGSTTKKEEEATEGKGENGGD--FSFDDDF 414
>gi|403371741|gb|EJY85755.1| Ribonucleoside-diphosphate reductase small chain [Oxytricha
trifallax]
Length = 379
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/323 (65%), Positives = 248/323 (76%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP+RF + PI+Y IW+MYK A+FWT+EE+DL+ D++ WE L +E+HF+ H
Sbjct: 61 EPLLEDNPNRFVILPIKYNDIWKMYKDQMAAFWTSEEIDLATDVKDWERLNDNERHFIKH 120
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TE+QV EAR FYGFQ+ +ENIHSE YS+L++T I D E
Sbjct: 121 VLAFFAASDGIVNENLAQRFCTEIQVPEARCFYGFQMMMENIHSETYSVLIDTLISDPHE 180
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF AI +P V KKA WA+ WI S +FAERLIAFA +EGIFFSGSFC+IFWLKKRG
Sbjct: 181 KEFLFKAITNIPVVTKKAEWAIKWIGESASFAERLIAFAAIEGIFFSGSFCSIFWLKKRG 240
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEG+H DFACLLY L KLS ER+ ++ AV IE EFV D+LP
Sbjct: 241 LMPGLTFSNELISRDEGMHTDFACLLYKHLNNKLSNERILEIITNAVGIELEFVSDSLPV 300
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +LM QYI FVADRLL ALG K Y V NPF+WM++ISL GKTNFFEKRVGEYQ
Sbjct: 301 ELIGMNSKLMGQYIMFVADRLLFALGVPKYYQVENPFEWMDMISLTGKTNFFEKRVGEYQ 360
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA+V + + VF +D DF
Sbjct: 361 KANVKQT----KEDKVFTLDADF 379
>gi|402466347|gb|EJW01856.1| hypothetical protein EDEG_03668 [Edhazardia aedis USNM 41457]
Length = 324
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 211/327 (64%), Positives = 261/327 (79%), Gaps = 4/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ E LL DRF +FPI++ +IW MYKKA++ FW+AEEVDLS+D W+ L++DE++F
Sbjct: 1 MKHEFLLEQTEDRFVLFPIKHEEIWRMYKKAQSCFWSAEEVDLSKDKEQWQLLSSDEQYF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+LAFFAASDGIV ENL RF EVQV EAR FYGFQIAIENIHSEMYSLLL+T I+D
Sbjct: 61 IKHILAFFAASDGIVNENLLERFAAEVQVPEARCFYGFQIAIENIHSEMYSLLLDTLIRD 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
S+EKN LF+AI+T+PC+ +KA WAL WI D F++RL+AFACVEGIFFSG+F AIFWL
Sbjct: 121 SNEKNMLFNAIQTIPCIKRKAEWALKWISDKDSHFSKRLLAFACVEGIFFSGAFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRG+M GLTFSNELISRDEGLHC FACLLYSL K+S+E V+ +VK+AVEIE+EF+
Sbjct: 181 KKRGIMDGLTFSNELISRDEGLHCQFACLLYSLCANKVSDEEVEGIVKDAVEIEKEFLTV 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
+L L+GMN +LMSQYIE+VAD L+ LGY K+Y ANPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 SLSVDLIGMNCKLMSQYIEYVADVLMDLLGYKKIYNTANPFDFMENISLRGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQK + ++ + F+ID+DF
Sbjct: 301 SEYQKPFIGTN---EANDSTFRIDDDF 324
>gi|194755279|ref|XP_001959919.1| GF11796 [Drosophila ananassae]
gi|190621217|gb|EDV36741.1| GF11796 [Drosophila ananassae]
Length = 393
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 217/329 (65%), Positives = 259/329 (78%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W L DE+
Sbjct: 71 PSL--EPLLKENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D ++ LF+AIET+P V +KA WAL WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALAWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L K ER+ ++++AV+IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQKPRRERIIEIIRDAVDIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN +LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQ+ V + N ++VF +D DF
Sbjct: 369 KVGEYQRMGVAT----NRLDNVFTLDADF 393
>gi|406663814|ref|ZP_11071833.1| Ribonucleoside-diphosphate reductase subunit beta [Cecembia
lonarensis LW9]
gi|405551928|gb|EKB47525.1| Ribonucleoside-diphosphate reductase subunit beta [Cecembia
lonarensis LW9]
Length = 326
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/324 (66%), Positives = 257/324 (79%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N +RF +FPIQ+ IW+ YKKAEASFWTAEE+DLSQDL+ W+ L E+HF++H
Sbjct: 5 EPILQDNKNRFVLFPIQHDDIWQFYKKAEASFWTAEEIDLSQDLKDWKNLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIK+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNPVE 124
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+++L +AIE + CV KKA WAL WID +F ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIDNG-SFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGL+FSNELISRDEGLHCDFAC LY+ + +L +E V ++K+AVEIE+EFV DALP
Sbjct: 184 LMPGLSFSNELISRDEGLHCDFACHLYTKHVNNQLPKETVTKIIKDAVEIEKEFVTDALP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL L K++ NPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVELDCEKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM S F ++EDF
Sbjct: 304 QKAGVMKSKEAIDSPK-FSVEEDF 326
>gi|11878241|gb|AAG40862.1| ribonucleotide reductase [Emericella nidulans]
Length = 406
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/337 (64%), Positives = 259/337 (76%), Gaps = 18/337 (5%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F++
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERYFIS 133
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIH+E YSLL++TYIK+
Sbjct: 134 RVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPK 193
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRTYLFDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++ EAV IE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNWRPSKKVVEDIIVEAVAIEKEFLTDAL 313
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN +LM QYIEFVADRLL ALG + + NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 314 PCALLGMNAKLMCQYIEFVADRLLVALGNKEYFNATNPFDFMESISLAGKTNFFEKRVGD 373
Query: 305 YQKASVMSSL------------NGNGGNHVFKIDEDF 329
YQKA VM+S +GNG DEDF
Sbjct: 374 YQKAGVMASTKKDPKQDETKTSDGNG----LSFDEDF 406
>gi|338209704|ref|YP_004653751.1| ribonucleoside-diphosphate reductase [Runella slithyformis DSM
19594]
gi|336303517|gb|AEI46619.1| Ribonucleoside-diphosphate reductase [Runella slithyformis DSM
19594]
Length = 331
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/309 (67%), Positives = 255/309 (82%), Gaps = 2/309 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL +P RF +FPI++ IW+ YK EA+FWTAEE+DL+ D++ W+ L E+HF++
Sbjct: 9 EEPLLVEDPHRFVLFPIKHHDIWQFYKNHEAAFWTAEEIDLASDMQDWDKLNDGERHFIS 68
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQIA+ENIHSE YSLL++TYIKD
Sbjct: 69 HVLAFFAASDGIVNENLAVNFLKEVQYAEAKCFYGFQIAMENIHSETYSLLIDTYIKDPV 128
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+R+ AIET+PCV KKA WAL WI G+ TFAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 129 EKDRMLRAIETIPCVQKKAEWALRWI-GNGTFAERLIAFAAVEGIFFSGSFCSIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLM GL+FSNELISRDEGLH DFACLLY+ + KL EE V +L+K+AV IE+EFV ++L
Sbjct: 188 GLMKGLSFSNELISRDEGLHRDFACLLYTDHIVNKLPEETVYSLIKDAVAIEQEFVTESL 247
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM++YIEFVAD LL +LG K+Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 248 PVSLIGMNSKLMNEYIEFVADHLLLSLGLQKVYNAVNPFDFMDMISLQGKTNFFEKKVGE 307
Query: 305 YQKASVMSS 313
YQKA V +S
Sbjct: 308 YQKAGVKNS 316
>gi|302696699|ref|XP_003038028.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
gi|300111725|gb|EFJ03126.1| hypothetical protein SCHCODRAFT_12788 [Schizophyllum commune H4-8]
Length = 377
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/326 (65%), Positives = 252/326 (77%), Gaps = 11/326 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
+EPLL + RF +FPIQY IW MYK+A+ASFWT+EE+ L+ D+R W E L +E++F+
Sbjct: 61 DEPLLRESQRRFVLFPIQYDDIWAMYKQAQASFWTSEEITLAYDMRDWTERLDDNERNFI 120
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 121 KHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 180
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF AIET+PC+ +KA WAL WI D S TFAERL+AFA VEGIFFSGSF AIFWLK
Sbjct: 181 QERDHLFAAIETIPCIKRKADWALRWISDKSSTFAERLVAFAAVEGIFFSGSFAAIFWLK 240
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H +FACLL+S LR + V+ +VKEAV IE EF+ DA
Sbjct: 241 KRGLMPGLTFSNELISRDEGMHTEFACLLFSHLRHRPHPSVVQRIVKEAVAIEHEFLSDA 300
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL +LG K+Y NPFD+M++ISLQGKTNFFEKRV
Sbjct: 301 LPVSLIGMNAALMRQYIEFVADRLLYSLGQNKIYNATNPFDFMDMISLQGKTNFFEKRVS 360
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
EY KA+V H F DEDF
Sbjct: 361 EYAKANV---------QHNFTTDEDF 377
>gi|449302142|gb|EMC98151.1| hypothetical protein BAUCODRAFT_66775 [Baudoinia compniacensis UAMH
10762]
Length = 421
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/307 (69%), Positives = 248/307 (80%), Gaps = 2/307 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EP+L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + L DE+ F++
Sbjct: 81 EPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFIS 140
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI +
Sbjct: 141 HVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPK 200
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AI+ +PC+ KKA WAL WI D + TFA RLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 201 QRQYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAVEGIFFSGSFASIFWLKK 260
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLM GLTFSNELISRDEG+H DFACLLYS LR K S+E V ++ EAV IE+EF+ DAL
Sbjct: 261 RGLMAGLTFSNELISRDEGMHTDFACLLYSHLRHKPSKELVTKIITEAVVIEQEFLSDAL 320
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN +LM QYIEFVADRL ALG + Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 321 PCALLGMNSKLMCQYIEFVADRLFVALGLSRHYNATNPFDFMENISLAGKTNFFEKRVGD 380
Query: 305 YQKASVM 311
YQKASVM
Sbjct: 381 YQKASVM 387
>gi|284039889|ref|YP_003389819.1| ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
gi|283819182|gb|ADB41020.1| Ribonucleoside-diphosphate reductase [Spirosoma linguale DSM 74]
Length = 349
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/311 (66%), Positives = 251/311 (80%), Gaps = 2/311 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L + RF +FPI++ IWE YK EASFWTAEE+DL QD++ W +L E+HF++H
Sbjct: 8 EPILEEDKGRFVLFPIKHWDIWEYYKTHEASFWTAEEIDLGQDMKDWNSLNDGERHFISH 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F++EVQ AEA+ FYGFQ+ +ENIHSE YSLL++TYIKD E
Sbjct: 68 VLAFFAASDGIVNENLAVNFLSEVQYAEAKCFYGFQVMMENIHSETYSLLIDTYIKDPVE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+RL +AI+T+PCV KKA WAL WID +FAERLIAFA VEGIFFSGSFC+I+WLKKRG
Sbjct: 128 KDRLLNAIDTIPCVQKKAEWALRWIDNG-SFAERLIAFAVVEGIFFSGSFCSIYWLKKRG 186
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY+ + KL E ++ +++ AVEIE+EFV DALP
Sbjct: 187 MMPGLTFSNELISRDEGLHRDFACMLYTDHIVNKLPESQIYDIIRNAVEIEQEFVADALP 246
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN ELM QYI FVAD LL LG K+Y VANPFD+M++ISLQGKTNFFEKRVGEY
Sbjct: 247 VSLIGMNAELMKQYIAFVADHLLVTLGLRKMYNVANPFDFMDMISLQGKTNFFEKRVGEY 306
Query: 306 QKASVMSSLNG 316
Q+ VMS
Sbjct: 307 QRGEVMSKFKA 317
>gi|374724341|gb|EHR76421.1| ribonucleoside-diphosphate reductase beta chain [uncultured marine
group II euryarchaeote]
Length = 348
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/324 (64%), Positives = 250/324 (77%), Gaps = 1/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N DRF +FPIQ+ IWEMYK+ A FWTAEE+DL++DL+ W+ L ADE+HF+ H
Sbjct: 25 EPMLQENLDRFVLFPIQHSDIWEMYKQQMACFWTAEEIDLAEDLKDWKNLNADEQHFLKH 84
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENL F EV EARAFYGFQI +ENIH+E YSLL++TYIKD E
Sbjct: 85 ILAFFAASDGIVNENLGINFSNEVCWPEARAFYGFQIMMENIHAETYSLLIDTYIKDEPE 144
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF A+ETVP V +K WA+ W+ + +FAERL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 145 KDHLFKALETVPSVKRKGEWAMRWLSRKQGSFAERLVAFAAVEGIFFSGSFCAIFWLKKR 204
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL++ L ++ ++ EAV+IE EFV ALP
Sbjct: 205 GLMPGLTFSNELISRDEGLHCDFACLLHNKLLRGAGAAKITRIIAEAVDIEIEFVTSALP 264
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN LM QYI+FVADRLL ALG K+Y V NPF WME+IS+QGKTNFFEKRV EY
Sbjct: 265 VSLIGMNSILMEQYIQFVADRLLVALGASKIYNVVNPFPWMEMISMQGKTNFFEKRVAEY 324
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM + + F +DEDF
Sbjct: 325 QKAGVMENASLGSVQQRFSVDEDF 348
>gi|384489720|gb|EIE80942.1| ribonucleoside-diphosphate reductase small chain [Rhizopus delemar
RA 99-880]
Length = 344
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+E +L N RFC+FPI+Y +IW+ YKKAEASFWTAEE+DLS+D WE +T +E+ F+
Sbjct: 23 QEEILRENTRRFCLFPIKYHEIWQFYKKAEASFWTAEEIDLSRDQNDWENKMTENERFFI 82
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFA+SDGIV ENL F EV++ EA+ FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 83 SRVLAFFASSDGIVNENLVQNFCDEVKIPEAKCFYGFQIMIENIHSETYSLLIDTYIKDD 142
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+EK LF AI+T+PC+ +KA WA WI +++FAERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 143 EEKEMLFSAIDTIPCIKRKADWAFKWISANDSFAERLVAFAAVEGIFFSGSFASIFWLKK 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL++ +R + S++RVK ++ EAV IE+EF+ DAL
Sbjct: 203 RGLMPGLTFSNELICRDEGLHTDFACLLFTHIRKQPSQQRVKDIIMEAVGIEQEFLTDAL 262
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRL+ ALG+ K+Y NPFD+M++ISLQGKTNFFEKRV +
Sbjct: 263 PVALIGMNSTLMCQYIEFVADRLMVALGFDKIYMATNPFDFMDMISLQGKTNFFEKRVSD 322
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+A VM N F +D DF
Sbjct: 323 YQRAGVM---NKTPVEKKFTLDADF 344
>gi|452846268|gb|EME48201.1| hypothetical protein DOTSEDRAFT_69973 [Dothistroma septosporum
NZE10]
Length = 417
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/307 (68%), Positives = 249/307 (81%), Gaps = 2/307 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EP+L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + L DE+ F++
Sbjct: 79 EPILQENPGRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFIS 138
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI +
Sbjct: 139 HVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPK 198
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AI+ +PC+ +KA WAL WI D + TFA RLIAFA VEGIFFSGSF AIFWLKK
Sbjct: 199 QRTYLFNAIDNIPCIRRKADWALRWISDKNSTFALRLIAFAAVEGIFFSGSFAAIFWLKK 258
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLM GLTFSNELISRDEG+H DFACLL+S L+ K ++ V++++ EAV IE+EF+ DAL
Sbjct: 259 RGLMAGLTFSNELISRDEGMHTDFACLLFSHLKNKPNQALVQSIITEAVTIEQEFLTDAL 318
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC L+GMN LMSQYIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVGE
Sbjct: 319 PCKLLGMNAGLMSQYIEFVADRLLLALGNKKFYNATNPFDFMENISLGGKTNFFEKRVGE 378
Query: 305 YQKASVM 311
YQKA VM
Sbjct: 379 YQKAGVM 385
>gi|301097698|ref|XP_002897943.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
gi|262106388|gb|EEY64440.1| ribonucleoside-diphosphate reductase small chain [Phytophthora
infestans T30-4]
Length = 360
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 212/323 (65%), Positives = 247/323 (76%), Gaps = 16/323 (4%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP L NP+RF +FPIQ +W+MYKKAEASFWTAEE+DL DL W LT +E+HF+ H
Sbjct: 54 EPYLVANPNRFVLFPIQEHDVWQMYKKAEASFWTAEELDLVHDLNDWAKLTDNERHFIKH 113
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F EVQ+ EAR FYGFQIAIENIHSE+YSLL++TYIKD+ E
Sbjct: 114 VLAFFAASDGIVNENLAMNFSNEVQIPEARCFYGFQIAIENIHSEVYSLLIDTYIKDAVE 173
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ L AIET+PCV KK + ERL+AFA VEGIFFSGSFC++FWLKKRG
Sbjct: 174 KDHLLRAIETIPCVQKKHS------------NERLLAFAAVEGIFFSGSFCSVFWLKKRG 221
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGL+FSNE+ISRDEG+H DFACL+YS L KL E RV ++++AV IE EFVCD+LP
Sbjct: 222 LMPGLSFSNEMISRDEGMHTDFACLMYSKLVNKLPESRVHEIIRDAVAIEHEFVCDSLPV 281
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM QYIEFVADRLL +LG K+Y V NPFDWM++ISLQGKTNFFEKRVGEY
Sbjct: 282 ELIGMNSALMCQYIEFVADRLLYSLGVSKIYNVKNPFDWMDMISLQGKTNFFEKRVGEYS 341
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA V S VF +D +F
Sbjct: 342 KAGVGVS----AEEQVFTLDAEF 360
>gi|323452425|gb|EGB08299.1| hypothetical protein AURANDRAFT_59025 [Aureococcus anophagefferens]
Length = 319
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/323 (66%), Positives = 254/323 (78%), Gaps = 6/323 (1%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHV 67
+LA N RF +FPI++ IW+MYK+AEASFWTAEEVDL D++HW+ L E+HF+ HV
Sbjct: 1 MLAVNSLRFVLFPIEHDDIWQMYKQAEASFWTAEEVDLCHDVQHWDTKLNDKERHFIKHV 60
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
LAFFAASDGIV ENLA F TEVQ EAR FYGFQIAIENIHSE+YSLL++TYI+D+ +K
Sbjct: 61 LAFFAASDGIVNENLAQNFATEVQWPEARCFYGFQIAIENIHSEVYSLLIDTYIRDAQKK 120
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ AI+T+PCVA+KA WAL W D +F ERL+AFA VEGIFFSGSFCA+FWLKKRG
Sbjct: 121 HECLTAIDTMPCVAEKAQWALRWCDPDHASFTERLLAFAAVEGIFFSGSFCAVFWLKKRG 180
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGL+FSNELI+RDEGLHCDFACLLYS LR KLS+ +V ++V AV+IE+ FV ALP
Sbjct: 181 LMPGLSFSNELIARDEGLHCDFACLLYSKLRKKLSDVQVASIVGAAVDIEKSFVVSALPV 240
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN + M +YIEF ADRLL LGY LYG NPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 241 ELIGMNSKSMCKYIEFCADRLLLELGYSTLYGATNPFDWMELISLQGKTNFFEKRVGEYA 300
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
KA V + F++D+DF
Sbjct: 301 KARV----DVRAQRLEFRLDDDF 319
>gi|242777635|ref|XP_002479074.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
stipitatus ATCC 10500]
gi|218722693|gb|EED22111.1| ribonucleotide reductase small subunit RnrA, putative [Talaromyces
stipitatus ATCC 10500]
Length = 406
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/333 (64%), Positives = 256/333 (76%), Gaps = 6/333 (1%)
Query: 2 PSIPE----EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-AL 56
P I E EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L
Sbjct: 64 PGIKEMEVNEPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRL 123
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
DE++FV+ VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL
Sbjct: 124 NDDERYFVSRVLAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLL 183
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYI + ++ LF AI+ +PC+ KKA WAL WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 184 IDTYINEPKQRTYLFDAIDNIPCIRKKADWALRWISDKESTFAQRLVAFAAVEGIFFSGS 243
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
F AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + + + ++ ++ +AV I
Sbjct: 244 FAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPNPKVIEDIIVDAVAI 303
Query: 236 EREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKT 295
E+EF+ DALPC+L+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKT
Sbjct: 304 EQEFLTDALPCSLLGMNSKLMCQYIEFVADRLLVALGNKKYYNSTNPFDFMENISLAGKT 363
Query: 296 NFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
NFFEKRVG+YQKA VM+S + K DE+
Sbjct: 364 NFFEKRVGDYQKAGVMNSTKKDKDASGEKKDEN 396
>gi|299747484|ref|XP_001837064.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
gi|298407540|gb|EAU84681.2| ribonucleotide reductase small subunit [Coprinopsis cinerea
okayama7#130]
Length = 379
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/306 (66%), Positives = 248/306 (81%), Gaps = 1/306 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL P+P R ++PIQYP+IW YK+A+ASFWTAEE+DLS D+ W LT E+HF++
Sbjct: 54 EEPLLKPSPKRLTLYPIQYPEIWTHYKRAQASFWTAEEIDLSHDMMDWSKLTNAERHFLS 113
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+LAFFA+SDGIV ENL RF +EVQV EAR FYGFQ+ IEN+HSE YSLL++TYIKD +
Sbjct: 114 RILAFFASSDGIVNENLVERFSSEVQVPEARCFYGFQVMIENVHSETYSLLIDTYIKDPE 173
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++ LF AIET+P + +KA WAL W D S TFAERL+AFA VEG+FFSGSF AIFW++K
Sbjct: 174 ERDFLFRAIETIPSIQRKAEWALTWTSDKSTTFAERLVAFAVVEGVFFSGSFAAIFWMRK 233
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGL+PGLTFSNELISRDEG+H DFACLL++ LR + + + A+V EAVEIE+EF DAL
Sbjct: 234 RGLLPGLTFSNELISRDEGMHTDFACLLFAYLRKRPHSDTILAIVTEAVEIEKEFFSDAL 293
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QYIEFVADRLL +LG K Y V NPFD+MELIS++GK NFFEKRV +
Sbjct: 294 PVSLIGMNSSLMNQYIEFVADRLLTSLGNDKHYHVDNPFDFMELISMEGKANFFEKRVSD 353
Query: 305 YQKASV 310
Y KA+V
Sbjct: 354 YAKANV 359
>gi|384496849|gb|EIE87340.1| ribonucleoside-diphosphate reductase small chain [Rhizopus delemar
RA 99-880]
Length = 344
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+E +L N RFC+FPI+Y +IW+ YKKAEASFWTAEE+DLS+D WE ++ +E+ F+
Sbjct: 23 QEEILRENTRRFCLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDQHDWENKMSENERFFI 82
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFA SDGIV ENL F EV++ EA+ FYGFQI IENIH+E YSLL++TYIKD+
Sbjct: 83 SRVLAFFAGSDGIVNENLVQNFCDEVKIPEAKCFYGFQIMIENIHAETYSLLIDTYIKDN 142
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK LF AI+T+PC+ +KA WA WI +E+FAERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 143 QEKEMLFSAIDTIPCIKRKADWAFKWISSNESFAERLVAFAAVEGIFFSGSFASIFWLKK 202
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL++ +R + S++RVK ++ EAV IE+EF+ DAL
Sbjct: 203 RGLMPGLTFSNELICRDEGLHTDFACLLFTHIRKQPSQQRVKDIIVEAVGIEQEFLSDAL 262
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM QYIEFVADRL+ ALG+ K+Y +NPFD+M++ISLQGKTNFFEKRV +
Sbjct: 263 PVALIGMNATLMCQYIEFVADRLMVALGFDKIYNASNPFDFMDMISLQGKTNFFEKRVSD 322
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+A VM N F +D DF
Sbjct: 323 YQRAGVM---NKTPVEKTFTLDADF 344
>gi|410027779|ref|ZP_11277615.1| ribonucleotide reductase subunit beta [Marinilabilia sp. AK2]
Length = 326
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/324 (66%), Positives = 256/324 (79%), Gaps = 3/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N +RF +FPIQ+ IW+ YKKAEASFWTAEE+DLSQDL+ W+ L E+HF++H
Sbjct: 5 EPILQENKNRFVLFPIQHDDIWQFYKKAEASFWTAEEIDLSQDLKDWKDLNDGERHFISH 64
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIK+ E
Sbjct: 65 VLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKNPVE 124
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+++L +AIE + CV KKA WAL WI+ F ERLIAFA VEGIFFSGSFC+IFWLKKRG
Sbjct: 125 RDKLLNAIEHIDCVKKKAEWALRWIENG-NFQERLIAFAAVEGIFFSGSFCSIFWLKKRG 183
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLHCDFAC LY+ + L + V ++K+AVEIE+EFV DALP
Sbjct: 184 LMPGLTFSNELISRDEGLHCDFACHLYTQHVLNPLPKSTVIEIIKDAVEIEKEFVTDALP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL LG K++ NPFD+M++ISLQGKTNFFEKRVG+Y
Sbjct: 244 VKLIGMNSDLMCQYIEFVADRLLVELGCSKVWNSTNPFDFMDMISLQGKTNFFEKRVGDY 303
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM S + F I+EDF
Sbjct: 304 QKAGVMKS-KETVDSPKFSIEEDF 326
>gi|343084827|ref|YP_004774122.1| ribonucleotide reductase [Cyclobacterium marinum DSM 745]
gi|342353361|gb|AEL25891.1| ribonucleotide reductase [Cyclobacterium marinum DSM 745]
Length = 326
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/328 (66%), Positives = 259/328 (78%), Gaps = 4/328 (1%)
Query: 4 IPEEPLLAPNPD-RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
+ EP+L + RF +FPIQ+ IW+ YKKAEASFWTAEE+DL QDL W+ L+ E+H
Sbjct: 1 MKSEPILEQGDNSRFVLFPIQHDDIWKYYKKAEASFWTAEEIDLGQDLNDWKNLSDGERH 60
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIK
Sbjct: 61 FISHVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIK 120
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ +E++ LF+AIE + CV KKA WAL WID F ERLIAFA VEGIFFSGSFC+IFWL
Sbjct: 121 NPEERDHLFNAIEHLDCVKKKAEWALRWIDKG-NFMERLIAFAAVEGIFFSGSFCSIFWL 179
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVC 241
KKRGLMPGLTFSNELISRDEGLHCDFAC LY+ L KL +E+V ++K+AVEIE+EFV
Sbjct: 180 KKRGLMPGLTFSNELISRDEGLHCDFACHLYTKHLVNKLPQEQVTQIIKDAVEIEKEFVT 239
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN ELM QYIEFVADRLL LG K++ NPFD+M++ISL+GKTNFFEKR
Sbjct: 240 DALPVRLIGMNSELMCQYIEFVADRLLLELGCSKVWNSKNPFDFMDMISLEGKTNFFEKR 299
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VG+YQKA VM + + F I+EDF
Sbjct: 300 VGDYQKAGVMKGKDDSSSGK-FSIEEDF 326
>gi|292397811|ref|YP_003517877.1| RR2b [Lymantria xylina MNPV]
gi|291065528|gb|ADD73846.1| RR2b [Lymantria xylina MNPV]
Length = 338
Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/330 (65%), Positives = 253/330 (76%), Gaps = 7/330 (2%)
Query: 2 PSIPE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
P P+ EPLL NP RF +FPIQY +W MYKKAEASFWT EEVDLS+D R WE L +E
Sbjct: 14 PFDPQAEPLLRENPRRFVIFPIQYSDMWSMYKKAEASFWTVEEVDLSKDTRDWERLNDNE 73
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+ HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+EN+HSEMYS L++TY
Sbjct: 74 RHFIKHVLAFFAASDGIVNENLVERFAQEVQVVEARCFYGFQIAMENVHSEMYSTLIDTY 133
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAI 179
++ S+EK RL +AIET+PCV +KA WAL WI E TF ERL+AFA VEG+FFSGSF AI
Sbjct: 134 VRSSEEKLRLLNAIETMPCVKEKAEWALRWIASKEATFGERLVAFAAVEGVFFSGSFAAI 193
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L + S RV+ +V +AV IE+ F
Sbjct: 194 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVQRPSAARVREIVTDAVAIEQRF 253
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALP L+G+N E MSQYIEFVADRLL L K Y ANP D+M LISL+GKTNFFE
Sbjct: 254 LTEALPVRLLGLNCETMSQYIEFVADRLLVDLIGTKHYNTANPLDFMTLISLEGKTNFFE 313
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
K+VGEYQK VM + + F +D DF
Sbjct: 314 KKVGEYQKFGVMFA-----KDDTFTLDADF 338
>gi|403221091|dbj|BAM39224.1| ribonucleotide reductase R2 subunit/ribonucleoside-diphosphate
reductase small chain [Theileria orientalis strain
Shintoku]
Length = 352
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 249/325 (76%), Gaps = 18/325 (5%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EE LL NP+R +FPI YP WE YKKA+ASFWTAEE+D S D+ HW LT DE HF++
Sbjct: 14 EEFLLNHNPNRTTLFPIVYPDFWEWYKKAQASFWTAEEIDFSMDMVHWNKLTKDEHHFIS 73
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIVLENLA +F+ +V++ EA++FY FQIA+ENIHSE YSLL+E YIKD
Sbjct: 74 NVLAFFAASDGIVLENLALKFLRDVKLPEAQSFYSFQIAVENIHSETYSLLIENYIKDEA 133
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKNRLF AIET+ V KA WA WI +FAER++A+A VEGI FSGSFCA+FWLKKR
Sbjct: 134 EKNRLFMAIETIDAVKDKANWAKKWITDDNSFAERIVAYAAVEGILFSGSFCALFWLKKR 193
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELI+RDEGLH DF C +Y L+ KL +E V+ ++KEAV +ER ++CD+LP
Sbjct: 194 GLMPGLTFSNELIARDEGLHADFGCYIYQNLKHKLPQEAVQQIIKEAVVVERSYICDSLP 253
Query: 246 CALVGMNG-------ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ------ 292
C L+GMN ELM+QYIEFVADRLL ALG +Y V NPFDWM+LIS+Q
Sbjct: 254 CDLIGMNSPLNKFFLELMTQYIEFVADRLLKALGVDPVYNVTNPFDWMDLISVQVSRVCG 313
Query: 293 -----GKTNFFEKRVGEYQKASVMS 312
GKTNFFEKRVGEYQKA +M+
Sbjct: 314 LMILKGKTNFFEKRVGEYQKAGIMA 338
>gi|351712114|gb|EHB15033.1| Ribonucleoside-diphosphate reductase subunit M2 B, partial
[Heterocephalus glaber]
Length = 334
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/325 (65%), Positives = 256/325 (78%), Gaps = 7/325 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L DEK+F++
Sbjct: 16 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPDEKYFIS 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL F EVQV E FYGFQI IEN+HSEMYSLL++TYI+D +
Sbjct: 76 HILAFFAASDGIVNENLV--FSQEVQVPEPCCFYGFQILIENVHSEMYSLLIDTYIRDPE 133
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 134 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K +E+RV+ ++ +AV IE+EF+ +AL
Sbjct: 194 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPAEDRVQEIIVDAVRIEQEFLTEAL 253
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 254 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 313
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 314 YQRFAVMAETTDN----VFTLDADF 334
>gi|9631087|ref|NP_047757.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
MNPV]
gi|3822355|gb|AAC70306.1| ribonucleotide reductase small subunit homolog [Lymantria dispar
MNPV]
Length = 348
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/324 (66%), Positives = 250/324 (77%), Gaps = 6/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQYP +W MYKKAEASFWT EEVDLS+D WE L +E+HF+ H
Sbjct: 30 EPLLRENPRRFVIFPIQYPDMWRMYKKAEASFWTVEEVDLSKDTSDWERLNDNERHFIKH 89
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQVAEAR FYGFQIA+EN+HSEMYS L++TY++ S+E
Sbjct: 90 VLAFFAASDGIVNENLVERFAQEVQVAEARCFYGFQIAMENVHSEMYSTLIDTYVRSSEE 149
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K RL +AIET+PCV +KA WAL WI G E F ERL+AFA VEG+FFSGSF AIFWLKKR
Sbjct: 150 KLRLLNAIETMPCVKEKAEWALRWIAGREAAFGERLVAFAAVEGVFFSGSFAAIFWLKKR 209
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL+ L + S RV+ +V +AV IE+ F+ +ALP
Sbjct: 210 GLMPGLTFSNELISRDEGLHCDFACLLFKHLVQRPSAARVREIVTDAVAIEQRFLTEALP 269
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N E MSQYIEFVADRLL L K Y NP D+M LISL+GKTNFFEK+VGEY
Sbjct: 270 VRLLGLNCETMSQYIEFVADRLLLELVGAKHYNTPNPLDFMNLISLEGKTNFFEKKVGEY 329
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM + + F +D DF
Sbjct: 330 QKFGVMFA-----KHEEFTLDADF 348
>gi|169779219|ref|XP_001824074.1| ribonucleoside-diphosphate reductase small chain [Aspergillus
oryzae RIB40]
gi|238499845|ref|XP_002381157.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
flavus NRRL3357]
gi|83772813|dbj|BAE62941.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220692910|gb|EED49256.1| ribonucleotide reductase small subunit RnrA, putative [Aspergillus
flavus NRRL3357]
gi|391873153|gb|EIT82227.1| ribonucleotide reductase, beta subunit [Aspergillus oryzae 3.042]
Length = 405
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/334 (64%), Positives = 255/334 (76%), Gaps = 13/334 (3%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE+ F++
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWHNRLNDDERFFIS 133
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIH+E YSLL++TYIK+
Sbjct: 134 RVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPK 193
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+ KKA WA+ WI D TF +RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRTYLFDAIDTIPCIRKKADWAIRWIQDQESTFGQRLVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + + V+ ++ EAV IE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPDPQIVEDVIVEAVSIEKEFLTDAL 313
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN LM QYIEFVADRLL ALG K + NPFD+M+ ISL GKTNFFEKRVG+
Sbjct: 314 PCALLGMNSNLMCQYIEFVADRLLVALGNNKYFNATNPFDFMDNISLAGKTNFFEKRVGD 373
Query: 305 YQKASVMSSL---------NGNGGNHVFKIDEDF 329
YQKA VM+S +G+ G F DEDF
Sbjct: 374 YQKAGVMASTKKEAKQEESSGSAGGLSF--DEDF 405
>gi|398391450|ref|XP_003849185.1| hypothetical protein MYCGRDRAFT_110972 [Zymoseptoria tritici
IPO323]
gi|339469061|gb|EGP84161.1| hypothetical protein MYCGRDRAFT_110972 [Zymoseptoria tritici
IPO323]
Length = 415
Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/339 (64%), Positives = 256/339 (75%), Gaps = 15/339 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
+EP+L N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + L DE+ F+
Sbjct: 77 DEPILQENGQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERFFI 136
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI +
Sbjct: 137 SHVLAFFAASDGIVNENLIERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEP 196
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+ +PC+ KKA WAL WI D + TFA RLIAFA +EGIFFSGSF +IFWLK
Sbjct: 197 KQRTYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAIEGIFFSGSFASIFWLK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L K S + V+ ++ EAV IE+EF+ DA
Sbjct: 257 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLNNKPSNQVVEDIITEAVVIEQEFLTDA 316
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVG
Sbjct: 317 LPCALLGMNAKLMCQYIEFVADRLLLALGNQKHYNATNPFDFMENISLGGKTNFFEKRVG 376
Query: 304 EYQKASVMSSLNGNGG-------------NHVFKIDEDF 329
+YQKA VM S+ N F DEDF
Sbjct: 377 DYQKAGVMDSIKKQAAKAEGADAEPAPVMNGDFAFDEDF 415
>gi|392574724|gb|EIW67859.1| hypothetical protein TREMEDRAFT_44873 [Tremella mesenterica DSM
1558]
Length = 405
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/331 (63%), Positives = 259/331 (78%), Gaps = 8/331 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL RF +FPI+Y +IW+MYK+A+ASFWT+EE++L+ DL WE L +E++F+
Sbjct: 76 DEPLLKETTSRFVLFPIKYREIWQMYKQAQASFWTSEEINLAPDLHDWENKLNDNERYFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVLAFFAASDGIV ENL RF EVQ AEA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 136 EHVLAFFAASDGIVNENLVERFSAEVQAAEAKCFYGFQIMMENIHSETYSLLIDTYIKDV 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
D +N LF AI+T+PC+ KKA WAL WI D TFAERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 196 DRRNYLFEAIDTIPCIRKKADWALRWITDTRSTFAERLIAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + V+ +++EAV+IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPSTVEKIIREAVKIEQEFLTDA 315
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K++ V+NPFD+ME+ISLQGK NFFE RV
Sbjct: 316 LPVSLIGMNAKLMCQYIEFVADRLLVALGNDKIWNVSNPFDFMEMISLQGKANFFESRVS 375
Query: 304 EYQKASVMSSLNGNGGNHV-----FKIDEDF 329
Y K+ V S+ G+ +H F +D+DF
Sbjct: 376 AYSKSGVNQSV-GSTTDHQAVKKGFSLDDDF 405
>gi|395328928|gb|EJF61318.1| beta subunit of ribonucleotide reductase [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/338 (63%), Positives = 257/338 (76%), Gaps = 12/338 (3%)
Query: 4 IPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
+PE EPLL RF +FPIQY +IW+MYK+A+ASFW+ EE++LS DL W LT +E
Sbjct: 68 LPEHLEPLLTETTRRFVLFPIQYNEIWQMYKQAQASFWSVEEINLSHDLWDWNYKLTDNE 127
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+++VLAFFAASDGIV ENL RF EVQ AEAR FYGFQI IEN+HSE YSLL++TY
Sbjct: 128 RHFLSYVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMIENVHSETYSLLIDTY 187
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD E+ LF AIETVPC+ KKA WAL WI D FAERL+AFA VEGIFFSGSF +I
Sbjct: 188 IKDPAERKFLFDAIETVPCIKKKADWALRWIADERSVFAERLVAFAAVEGIFFSGSFASI 247
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+ LR + RV ++ EAVEIE+EF
Sbjct: 248 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFHHLRRRPHPARVVKIITEAVEIEKEF 307
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALP +L+G+N +LM QYIEFVADRLL ALG K Y NPFD+M++ISLQGK NFFE
Sbjct: 308 LSEALPVSLIGINAQLMCQYIEFVADRLLVALGNEKHYNATNPFDFMDMISLQGKANFFE 367
Query: 300 KRVGEYQKASVMSSLNGNG--------GNHVFKIDEDF 329
KRV EY KA+ +L+ G NHVF ++EDF
Sbjct: 368 KRVSEYAKANFNHTLSREGSEKPAEGSSNHVFTLNEDF 405
>gi|221120499|ref|XP_002159812.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Hydra magnipapillata]
Length = 387
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/312 (67%), Positives = 248/312 (79%), Gaps = 2/312 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP RF +FPIQY IW+MYK+AEASFWT EEVDL+ D HWE L EK+F+
Sbjct: 59 DEPLLRENPRRFVLFPIQYKDIWKMYKQAEASFWTVEEVDLAADAVHWEEKLKPQEKYFI 118
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL F EVQ+ EARAFYGFQIAIENIHSEMYSLL++T IKD
Sbjct: 119 SHVLAFFAASDGIVNENLVECFSQEVQLPEARAFYGFQIAIENIHSEMYSLLIDTLIKDP 178
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK+ LF+AIET+PCV KKA WAL WI+ +F+ER++AFA VEGIFFSGSF AIFWLK
Sbjct: 179 IEKSNLFNAIETMPCVQKKAVWALKWINKDCASFSERVVAFAAVEGIFFSGSFAAIFWLK 238
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KR L+PG+TFSNELISRDEGLHCDFACL+Y + K SEERVK ++++AV IE EF+ ++
Sbjct: 239 KRNLLPGVTFSNELISRDEGLHCDFACLMYKHIVNKPSEERVKQIIRDAVAIEIEFLTES 298
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPC L+GMN LM YIEF ADRL+ ALGY K + V NPFD+ME ISL K NFFE RV
Sbjct: 299 LPCDLLGMNKSLMKTYIEFCADRLINALGYSKEWNVENPFDFMENISLARKANFFESRVS 358
Query: 304 EYQKASVMSSLN 315
+YQKA VM S+N
Sbjct: 359 DYQKAGVMDSIN 370
>gi|440475735|gb|ELQ44398.1| ribonucleoside-diphosphate reductase subunit M2 B [Magnaporthe
oryzae Y34]
gi|440486447|gb|ELQ66310.1| ribonucleoside-diphosphate reductase subunit M2 B [Magnaporthe
oryzae P131]
Length = 403
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/342 (63%), Positives = 259/342 (75%), Gaps = 29/342 (8%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L NP RF +W+MYKKAEASFWTAEE+DLS+DL W LT DEK+F+
Sbjct: 73 DEPILQENPQRF---------VWQMYKKAEASFWTAEEIDLSKDLHDWNNKLTDDEKYFI 123
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TYIK++
Sbjct: 124 SHILAFFAASDGIVNENLVERFSAEVQIPEARCFYGFQIMMENIHSETYSLLIDTYIKET 183
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WAL WI D TFA RLIAFA VEGIFFSG+F +IFWLK
Sbjct: 184 AQRTYLFNAIDTIPCIRKKADWALRWITDKKSTFATRLIAFAVVEGIFFSGAFASIFWLK 243
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+SLL + ++E VK +V +AV+IE+EF+ +A
Sbjct: 244 KRGLMPGLTFSNELISRDEGLHTDFACLLFSLLNNRPNKEVVKEIVVDAVKIEQEFLTEA 303
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRVG
Sbjct: 304 LPCALLGMNANLMKQYIEFVADRLLVALGNEKVYRATNPFDFMENISLGGKTNFFEKRVG 363
Query: 304 EYQKASVMSSL----------------NGNGGNHVFKIDEDF 329
EYQKA VM+S + N G+ F D+DF
Sbjct: 364 EYQKAGVMASTKKAPVEEKTSTSPQAEDSNSGDFTF--DDDF 403
>gi|10344|emb|CAA26307.1| unnamed protein product [Spisula solidissima]
Length = 300
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/301 (70%), Positives = 249/301 (82%), Gaps = 2/301 (0%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWTAEEVDLS+D+ HWE+L +EKHF++HVLAFFAASDGIV ENL RF E
Sbjct: 1 MYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISHVLAFFAASDGIVNENLVERFSKE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E++ LF+AIET+PCV +KA WA+
Sbjct: 61 VQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQERDFLFNAIETMPCVKEKADWAMR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D S ++AER++AFA VEGIFFSGSF +IFWLKKRG+MPGLTFSNELISRDEGLHCDF
Sbjct: 121 WINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKRGIMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL++S L K S+ER+ ++ EAV+IE+ F+ +ALPC L+GMN +LM QYIEFVADRLL
Sbjct: 181 ACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALPCRLIGMNCDLMRQYIEFVADRLL 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
L KLY NPFD+ME ISL+GKTNFFEKRVGEYQK VMS N G +H F +D D
Sbjct: 241 LELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEYQKMGVMSGGN-TGDSHAFTLDAD 299
Query: 329 F 329
F
Sbjct: 300 F 300
>gi|297736972|emb|CBI26173.3| unnamed protein product [Vitis vinifera]
Length = 312
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/263 (78%), Positives = 233/263 (88%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWTAEEVDLS D++ WE+L+ EKHF++HVLAFFAASDGIVLENLA RF+ +
Sbjct: 1 MYKKAEASFWTAEEVDLSHDVQQWESLSNSEKHFISHVLAFFAASDGIVLENLAARFLHD 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
+Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKDS EK+RLF+AIE++ CVA KA WAL+
Sbjct: 61 IQIPEARAFYGFQIAMENIHSEMYSLLLETYIKDSKEKHRLFNAIESISCVAGKAKWALD 120
Query: 150 WIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 209
WI S FAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA
Sbjct: 121 WIQSSTLFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 180
Query: 210 CLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLG 269
CLLYSLL+ +L ++V +V EAVEIE +FVC+ALPCAL+GMN LMSQYI+FVADRLL
Sbjct: 181 CLLYSLLQKQLPWQKVHHIVHEAVEIETQFVCEALPCALIGMNATLMSQYIKFVADRLLV 240
Query: 270 ALGYGKLYGVANPFDWMELISLQ 292
ALGY + Y V NPFDWME ISLQ
Sbjct: 241 ALGYERKYNVENPFDWMEFISLQ 263
>gi|431797145|ref|YP_007224049.1| ribonucleotide reductase subunit beta [Echinicola vietnamensis DSM
17526]
gi|430787910|gb|AGA78039.1| ribonucleotide reductase, beta subunit [Echinicola vietnamensis DSM
17526]
Length = 327
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 214/325 (65%), Positives = 258/325 (79%), Gaps = 4/325 (1%)
Query: 7 EPLLAPNPD-RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EP+L + RF +FPIQ+ IWE YKKAEASFWTAEE+DL QD++ W+ L+ DE+HF++
Sbjct: 5 EPILEQGDNSRFVLFPIQHDDIWEFYKKAEASFWTAEEIDLGQDMKDWKNLSDDERHFIS 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQIA+ENIHSE YSLL++TYIK+
Sbjct: 65 HVLAFFAASDGIVNENLAEHFVAEVQYTEAKFFYGFQIAMENIHSETYSLLIDTYIKEPK 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E++RLF+AIE + CV KKA WAL WID + F ERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 ERDRLFNAIEHLDCVKKKADWALRWIDEGD-FQERLIAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFAC LY+ + L +E V ++++AV IE+EFV DAL
Sbjct: 184 GLMPGLTFSNELISRDEGLHCDFACHLYTQHIVNPLPKETVSKIIQDAVAIEKEFVTDAL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM QYIEFVADRLL LG K++ NPFD+M++ISLQGKTNFFEKRVG+
Sbjct: 244 PVRLIGMNADLMCQYIEFVADRLLLELGCEKVWNSTNPFDFMDMISLQGKTNFFEKRVGD 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM + + F ++EDF
Sbjct: 304 YQKAGVMKGKDASDSAK-FSVEEDF 327
>gi|10432587|dbj|BAB13815.1| ribonucleotide reductase small subunit [Lentinula edodes]
Length = 418
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/328 (65%), Positives = 253/328 (77%), Gaps = 4/328 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W L E+ F+
Sbjct: 91 EEPLLLESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRLNDSERFFI 150
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL RF EVQVAEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 151 SRVLAFFAASDGIVNENLLERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 210
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E++ LF AIET+PC+ +KA WAL WI D F ERL+AFA VEGIFFSGSF +IFW+K
Sbjct: 211 VERDFLFDAIETIPCIKRKAEWALRWISDEHSVFGERLVAFAAVEGIFFSGSFASIFWMK 270
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGL FSNELISRDEG+H DFACLL+S LR + + V+ ++KEAV IE+EF+ DA
Sbjct: 271 KRGLMPGLAFSNELISRDEGMHTDFACLLFSHLRRRPHPDTVERIIKEAVAIEQEFLTDA 330
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG KLY NPFD+M++ISLQGKTNFFEKRV
Sbjct: 331 LPVSLIGMNATLMCQYIEFVADRLLVALGNKKLYNSTNPFDFMDMISLQGKTNFFEKRVS 390
Query: 304 EYQKASVMSSLNGNG--GNHVFKIDEDF 329
+Y KA V S + + F +DEDF
Sbjct: 391 DYSKAGVNHSGDNTTTQASKTFVLDEDF 418
>gi|289742419|gb|ADD19957.1| ribonucleotide reductase beta subunit [Glossina morsitans
morsitans]
Length = 396
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/317 (66%), Positives = 249/317 (78%), Gaps = 3/317 (0%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EPLL NP RF +FPIQYP+IW+MYKKAEASFWTAEEVDLS+D+ W L+ E+
Sbjct: 74 PSI--EPLLKENPKRFVIFPIQYPEIWKMYKKAEASFWTAEEVDLSKDMDDWNRLSDGER 131
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYSLL+ETYI
Sbjct: 132 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSLLIETYI 191
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
D E+ LF+AIET+P V KKA WAL WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 192 MDEKEREYLFNAIETMPLVKKKAEWALAWISSHSANFGERIIAFAAVEGIFFSGSFASIF 251
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRG+MPGLTFSNE+ISRDEGLHC+FA L++ L K S+ER+ ++ +AV+IE+EF+
Sbjct: 252 WLKKRGIMPGLTFSNEMISRDEGLHCEFAVLMFKHLIQKPSKERILEIITDAVKIEKEFL 311
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN E M +YIE+VADRLL L GK Y NPF++M IS+ GKTNFFEK
Sbjct: 312 TEALPVDLIGMNSESMCKYIEYVADRLLLELDVGKYYLAENPFEFMNKISIDGKTNFFEK 371
Query: 301 RVGEYQKASVMSSLNGN 317
RVGEYQK V S + N
Sbjct: 372 RVGEYQKIGVSSDDDQN 388
>gi|156087150|ref|XP_001610982.1| ribonucleoside-diphosphate reductase small subunit [Babesia bovis
T2Bo]
gi|154798235|gb|EDO07414.1| ribonucleoside-diphosphate reductase small subunit, putative
[Babesia bovis]
Length = 339
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 252/324 (77%), Gaps = 4/324 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EE +L +P+R ++PI+YP WE YKKA+ASFWT+EE+DLS DL+ W LT E HF+
Sbjct: 20 EEFILVEDPNRNGLYPIKYPDFWEWYKKAQASFWTSEEIDLSSDLKDWGTLTEGEHHFIK 79
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIVLENLA RF+ +V++ EA+ FY FQI +ENIHSE YSLL+E YI+D
Sbjct: 80 NVLAFFAASDGIVLENLALRFLKDVKLPEAKFFYCFQITVENIHSETYSLLIEQYIRDEA 139
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF AIET+ V KA WA W++ ++FAER++A+A VEGIFFSGSFCAIFWLKKR
Sbjct: 140 EKDRLFRAIETIDAVRDKAIWAAKWMNDEKSFAERIVAYAAVEGIFFSGSFCAIFWLKKR 199
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELI+RDEGLH DF C +YS L+ KL E V+ ++KEAV +ER FVCD+LP
Sbjct: 200 GLMPGLTFSNELIARDEGLHADFGCFIYSKLKHKLPAECVQQIIKEAVAVERVFVCDSLP 259
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM+QYIEFVADRLL ALG +Y NPF+WMELIS+QGKTNFFEKRVGEY
Sbjct: 260 TDLIGMNSMLMAQYIEFVADRLLQALGVPPVYKTKNPFEWMELISVQGKTNFFEKRVGEY 319
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK+ +++ N F D DF
Sbjct: 320 QKSGILA----NQDEQKFATDADF 339
>gi|344303170|gb|EGW33444.1| hypothetical protein SPAPADRAFT_50323 [Spathaspora passalidarum
NRRL Y-27907]
Length = 419
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 212/327 (64%), Positives = 253/327 (77%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL N RF MFPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L +E++F+
Sbjct: 93 EEPLLKENSRRFVMFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDNERYFI 152
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDG+V ENL F EVQ+ EA+AFYGFQI IE IHSE+YSLL++TY+KD
Sbjct: 153 SRVLAFFAASDGLVNENLVENFSAEVQIPEAKAFYGFQIMIEMIHSEVYSLLIDTYVKDP 212
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF AI T+PC+AKKA WAL WI D +AERL+AFA +EGIFFSGSF +IFWLK
Sbjct: 213 QEAEFLFDAIHTIPCIAKKADWALKWIADTDALYAERLVAFAAIEGIFFSGSFASIFWLK 272
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ L+ + E V+ ++ EAV IE+E+ DA
Sbjct: 273 KRGLMPGLTFSNELISRDEGLHTDFACLLFAHLKNRPDPEIVERIIVEAVAIEKEYFTDA 332
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL A G K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 333 LPVSLLGMNCALMCQYVEFVADRLLVAFGNKKVYNVVNPFDFMENISLAGKTNFFEKRVS 392
Query: 304 EYQKASVMSSLN-GNGGNHVFKIDEDF 329
+YQ+A VM+ N +H FK DEDF
Sbjct: 393 DYQRAGVMAKTNEPTSSSHEFKFDEDF 419
>gi|170089003|ref|XP_001875724.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
gi|164648984|gb|EDR13226.1| ribonucleotide reductase, beta subunit [Laccaria bicolor S238N-H82]
Length = 422
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/315 (66%), Positives = 249/315 (79%), Gaps = 2/315 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W + +E+HF+
Sbjct: 85 EEPLLKESKRRFVLFPIQYNEIWQMYKKAEASFWTAEEMDLSKDLHDWNNRMNDNERHFI 144
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL+++YIKD
Sbjct: 145 SHVLAFFAASDGIVNENLLERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDSYIKDP 204
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AIET+PC+ +KA WAL WI D TFAERL+AFA VEGIFFSGSF +IFW+K
Sbjct: 205 AQREYLFDAIETIPCIKRKAEWALKWISDQESTFAERLVAFAAVEGIFFSGSFASIFWMK 264
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S L+ + E VK ++ EAV+IE+EF+ DA
Sbjct: 265 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLKRRPHPEVVKHIIVEAVKIEQEFLTDA 324
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN +LM QYIEFVADRLL +LG K Y NPFD+M++ISLQGKTNFFEKRV
Sbjct: 325 LPVKLIGMNADLMCQYIEFVADRLLVSLGNEKHYNKTNPFDFMDMISLQGKTNFFEKRVS 384
Query: 304 EYQKASVMSSLNGNG 318
+Y KA + S +
Sbjct: 385 DYSKAGINHSSTSDN 399
>gi|320585888|gb|EFW98567.1| ribonucleotide reductase small subunit [Grosmannia clavigera
kw1407]
Length = 378
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 213/326 (65%), Positives = 255/326 (78%), Gaps = 9/326 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL N RF +FPI+Y +IW+MYKK EASFWTAEE+DLS+DL W L DE+ FV
Sbjct: 60 EEPLLKENAQRFVLFPIKYHEIWQMYKKHEASFWTAEEIDLSKDLHDWNNRLNDDERFFV 119
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI +EN+HSE YSLL++TYIKD+
Sbjct: 120 SHILAFFAASDGIVNENLVERFSAEVQVPEARCFYGFQIMMENVHSETYSLLIDTYIKDT 179
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF+AI+T+PC+ KKA WAL WI D TFA+RL+AFA VEGIFFSG+F +IFWLK
Sbjct: 180 AQRTHLFNAIDTIPCIRKKADWALKWISDRESTFAQRLVAFAAVEGIFFSGAFSSIFWLK 239
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L+ + S++ ++ ++ +AV+IE+EF+ +A
Sbjct: 240 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLKNRPSKQLIEEIIVDAVKIEQEFLTEA 299
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LPCAL+GMN LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 300 LPCALLGMNSTLMKQYIEFVADRLLVALGNDKVYNSTNPFDFMENISLGGKTNFFEKRVP 359
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
E N +GGN F DEDF
Sbjct: 360 EEAPVE-----NVDGGN--FNFDEDF 378
>gi|383451662|ref|YP_005358383.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
indicum GPTSA100-9]
gi|380503284|emb|CCG54326.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
indicum GPTSA100-9]
Length = 325
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 258/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+LA N DRF +FPIQ+ IW++YKK EA FWTAEE+DL QD+ W L DE++F+
Sbjct: 5 EPILAENKDRFVIFPIQHHDIWDLYKKQEACFWTAEEIDLHQDITDWSTKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F++EVQ +EA+ FYGFQ+ +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVSEVQYSEAKFFYGFQLMMENIHSETYSLLIDTYVKDEK 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN LF AIE P +AKKA WAL WID S +FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKNILFKAIENFPAIAKKADWALKWID-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+ + L K+S++R+ ++ A++IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNNHLVNKVSKDRITEIITNALDIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL LG K+Y V NPFD+M++ISL+GKTNFFEKRVGE
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLVELGCKKVYNVTNPFDFMDMISLEGKTNFFEKRVGE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V +N + G F D DF
Sbjct: 304 YQKAGV---VNNDAGEDKFSFDADF 325
>gi|9633826|ref|NP_051904.1| gp015L [Rabbit fibroma virus]
gi|6578545|gb|AAF17899.1|AF170722_17 gp015L [Rabbit fibroma virus]
Length = 322
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 253/327 (77%), Gaps = 6/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +EP+L + DR+ +FPIQY IW+MYKKA ASFWT EEVD+S+DL+ W LT+DEK+F
Sbjct: 1 MEDEPVLKESLDRYVVFPIQYNDIWKMYKKAVASFWTPEEVDISKDLKDWHILTSDEKYF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+LAFFAASDGIV ENLA RF EVQ+AEAR FYGFQIAIENIHSEMYSLL++TYI D
Sbjct: 61 IKHILAFFAASDGIVNENLAERFYVEVQIAEARCFYGFQIAIENIHSEMYSLLIDTYIID 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWL 182
EK +LF AIET+ C+ +KA W WI + T+AERLIAFA VEGIFFSGSF AIFWL
Sbjct: 121 IQEKEKLFKAIETMDCIKQKAEWVQKWIRNKDATYAERLIAFASVEGIFFSGSFAAIFWL 180
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRG MPGLTFSNELISRDEGLHCDFACL++ L SE R ++KEAV IE++F+
Sbjct: 181 KKRGKMPGLTFSNELISRDEGLHCDFACLMFKHLNHTPSETRATDIIKEAVVIEQQFLTK 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+G+N +LM QYIEFVADRL+ LGY K++ NPFD+ME ISL+GKTNFFEKRV
Sbjct: 241 ALPVRLIGINCDLMCQYIEFVADRLVTELGYSKIFSATNPFDFMENISLEGKTNFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ V S ++ F +D DF
Sbjct: 301 SDYQRMGVASK-----QDNTFSLDVDF 322
>gi|254572986|ref|XP_002493602.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Komagataella pastoris GS115]
gi|238033401|emb|CAY71423.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Komagataella pastoris GS115]
gi|328354568|emb|CCA40965.1| ribonucleoside-diphosphate reductase subunit M2 [Komagataella
pastoris CBS 7435]
Length = 400
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FP++Y IW+MYK+AEASFWTAEE+DL +DL W + +EK F+
Sbjct: 75 DEPLLVENKRRFVLFPLKYHDIWQMYKQAEASFWTAEEIDLGKDLHDWNNRMNDNEKFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSAEVQLPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AIET+PC+ +KA WA+ WI D FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIETIPCIKEKADWAMRWISDDDALFAERLVAFAAVEGIFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L + SEE V+ ++ EAVEIE+ + DA
Sbjct: 255 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNRASEEIVEKIITEAVEIEKRYFTDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVSLLGMNCSLMCQYVEFVADRLLVALGNKKVYNVNNPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+S + + F DEDF
Sbjct: 375 DYQKAGVMASTDKTSNDDAFAFDEDF 400
>gi|322795965|gb|EFZ18591.1| hypothetical protein SINV_11129 [Solenopsis invicta]
Length = 426
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/311 (69%), Positives = 250/311 (80%), Gaps = 4/311 (1%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQ-DLRHW-EALTADEK 61
PE EPLL P+RF +FPIQYP IWEMYKKA ASFWT EEV L + D + W E L +DEK
Sbjct: 97 PELEPLLQEGPNRFVIFPIQYPDIWEMYKKAVASFWTIEEVPLHKLDKKDWDEKLNSDEK 156
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EV++AEAR FYGFQIAIENIHSEMYSLL+ETYI
Sbjct: 157 YFISHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYGFQIAIENIHSEMYSLLIETYI 216
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
D EK+ LF+AIET+PCV KKA WALNWI+ S TF ER+IAFA VEGIFFSGSF AIF
Sbjct: 217 SDPKEKDFLFNAIETLPCVGKKAKWALNWINHESATFPERVIAFAAVEGIFFSGSFAAIF 276
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRG+MPGLTFSNELISRDEGLHCDFACL++ + K S E VK+++ +AVEIE+EF+
Sbjct: 277 WLKKRGVMPGLTFSNELISRDEGLHCDFACLIFKHIIQKPSFEHVKSIIMDAVEIEKEFL 336
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
ALP L+GMN LM YIEFVADRL ALG+ K+Y NPF +M ISL+GKTNFFEK
Sbjct: 337 TQALPVELIGMNCSLMCNYIEFVADRLFVALGFEKVYNSENPFSFMNFISLEGKTNFFEK 396
Query: 301 RVGEYQKASVM 311
+VGEY+K V+
Sbjct: 397 KVGEYKKFGVV 407
>gi|399218011|emb|CCF74898.1| unnamed protein product [Babesia microti strain RI]
Length = 332
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/324 (62%), Positives = 246/324 (75%), Gaps = 5/324 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E +L P PDR ++P+Q IW YKKA+ASFWT EEVDL D R W LT E+HF+
Sbjct: 14 DEYILNP-PDRASLYPLQRVDIWNFYKKAQASFWTVEEVDLGTDSRDWLGLTDGERHFIK 72
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA +F+ +V++ EA+ FY FQI +ENIHSEMYSLL++ YI++
Sbjct: 73 HVLAFFAASDGIVLENLAAKFLNDVKLLEAQFFYVFQITVENIHSEMYSLLIDKYIQEES 132
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF A+ET+P + KKA WA WI+ +FAERL+A+ VEGI FSGSFCAIFWLKKR
Sbjct: 133 EKMHLFRAVETIPAIRKKAEWAARWINNENSFAERLVAYTAVEGILFSGSFCAIFWLKKR 192
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH +F C +Y LR L E V +++ AV++ER F+CD+LP
Sbjct: 193 GLMPGLTFSNELISRDEGLHAEFGCYMYRQLRHPLPESTVHDIIRNAVQVERAFICDSLP 252
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM+QYIE+V+DRLL +LG K++ VANPFDWM+LISLQGKTNFFEKRVGEY
Sbjct: 253 CDLIGMNSRLMTQYIEYVSDRLLSSLGVSKIFNVANPFDWMDLISLQGKTNFFEKRVGEY 312
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA +M+ N F DF
Sbjct: 313 QKAGIMA----NQDEQTFSTSNDF 332
>gi|219126374|ref|XP_002183434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405190|gb|EEC45134.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 296
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/301 (69%), Positives = 244/301 (81%), Gaps = 6/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWTAEE+DL+ DL+ W+ L+++E+HFV+HVLAFFAASDGIV ENLAG F TE
Sbjct: 1 MYKKAEASFWTAEEIDLAGDLQDWDKLSSNERHFVSHVLAFFAASDGIVNENLAGNFATE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
+Q AEAR FYGFQIA+ENIHSE YSLL++TY++D+ EK+ L HAIETVPCV KKA+WAL
Sbjct: 61 IQSAEARCFYGFQIAVENIHSETYSLLIDTYVRDAAEKDHLLHAIETVPCVQKKASWALQ 120
Query: 150 WIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
W D + +FAER +AFA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDANHASFAERCVAFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACLLYS L+ +L R+ ++ +AV IE+EFV DALP L+GMN LM +YIEF ADRLL
Sbjct: 181 ACLLYSKLQNQLPVARIVEIITDAVTIEQEFVQDALPVELIGMNSTLMCRYIEFCADRLL 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
ALG K Y NPFDWME+ISLQGKTNFFEKRVGEY K+ V G NH F ++ D
Sbjct: 241 VALGCPKHYKAVNPFDWMEMISLQGKTNFFEKRVGEYAKSGV-----GEKDNHCFDLEAD 295
Query: 329 F 329
F
Sbjct: 296 F 296
>gi|47208564|emb|CAF96041.1| unnamed protein product [Tetraodon nigroviridis]
Length = 352
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/352 (61%), Positives = 256/352 (72%), Gaps = 33/352 (9%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQYP IW+MYK+A+ASFWT EEVDLS+DL HW++L +EKHF++H
Sbjct: 5 EPLLQENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLAHWDSLKPEEKHFISH 64
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR+FY +Q+ IE++HSEMYSLL+ TYI+D E
Sbjct: 65 VLAFFAASDGIVNENLVQRFCQEVQVPEARSFYSYQVLIESVHSEMYSLLINTYIRDLKE 124
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF+AI T+PCV +KA WAL WI D + TF ERL+AFA VEGIFFSGSF +I+WLKKR
Sbjct: 125 REHLFNAIYTMPCVKRKADWALQWINDSTSTFGERLVAFAAVEGIFFSGSFASIYWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIER-------- 237
GLMPGLT+SNELISRDEGLHC FACLLYS L K SE+RVK ++ +AV IE+
Sbjct: 185 GLMPGLTYSNELISRDEGLHCTFACLLYSYLVKKPSEDRVKDIITKAVSIEQVGGSYRSM 244
Query: 238 --------------------EFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLY 277
EF+ +ALP L+GMN LM QYIEFVADRL LG K+Y
Sbjct: 245 DGNKPNREVLIKDATCFCLQEFLTEALPVDLIGMNRCLMKQYIEFVADRLFADLGLAKMY 304
Query: 278 GVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
NPFD+ME ISL+GKTNFFEKRV EYQ+ +MSS + F +D DF
Sbjct: 305 NAENPFDFMEAISLEGKTNFFEKRVAEYQRFGIMSS----PVDSEFTLDADF 352
>gi|452987065|gb|EME86821.1| hypothetical protein MYCFIDRAFT_49456 [Pseudocercospora fijiensis
CIRAD86]
Length = 418
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/310 (67%), Positives = 249/310 (80%), Gaps = 2/310 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EP+L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W + L DE++F++
Sbjct: 81 EPILQENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNKRLNDDERYFIS 140
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF +EVQ+ EAR FYGFQI +ENIHSE YSLL++TYI +
Sbjct: 141 HVLAFFAASDGIVNENLVERFSSEVQIPEARCFYGFQIMMENIHSETYSLLIDTYISEPK 200
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+AI+ +PC+ KKA WAL WI D + TFA RLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 201 QRSYLFNAIDNIPCIRKKADWALRWISDKNSTFACRLIAFAAVEGIFFSGSFASIFWLKK 260
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLM GLTFSNELISRDEG+H DFACLL+S L+ K V++++ EAV IE+EF+ DAL
Sbjct: 261 RGLMAGLTFSNELISRDEGMHTDFACLLFSHLKNKPDASLVQSIIVEAVAIEQEFLTDAL 320
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM QYIEFVADRLL ALG K Y NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 321 PVMLLGMNAKLMCQYIEFVADRLLLALGNQKFYNATNPFDFMENISLGGKTNFFEKRVGD 380
Query: 305 YQKASVMSSL 314
YQKA VM +
Sbjct: 381 YQKAGVMEGI 390
>gi|378726205|gb|EHY52664.1| ribonucleoside-diphosphate reductase small chain [Exophiala
dermatitidis NIH/UT8656]
Length = 417
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/318 (66%), Positives = 250/318 (78%), Gaps = 6/318 (1%)
Query: 2 PSIPE----EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-AL 56
P+I E EP+L NP RF +FPI+Y +IW MYKKAEASFWTAEEVDLS+DL W L
Sbjct: 73 PTIKELEADEPILQENPHRFVLFPIKYHEIWNMYKKAEASFWTAEEVDLSKDLHDWHNRL 132
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
DE++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIHSEMYSLL
Sbjct: 133 NDDERYFISHVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHSEMYSLL 192
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGS 175
++TYIKD+ +K LF AI+T+PC+ KKA WAL WI D TFA+RL+AFA VEGIFFSGS
Sbjct: 193 IDTYIKDNKQKTYLFDAIDTIPCIRKKADWALKWICDHESTFAQRLVAFAAVEGIFFSGS 252
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
F +IFWLK +GLMPGLTFSNELISRDEG+H DFACLL L+ K + ++ ++ EAV I
Sbjct: 253 FASIFWLKSKGLMPGLTFSNELISRDEGMHTDFACLLIQHLKHKPDPKLIEDIITEAVAI 312
Query: 236 EREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKT 295
E+EF+ +ALP AL+GMN +LM QYIEFVADRLL ALG K Y PF +ME ISL GKT
Sbjct: 313 EKEFLTEALPVALLGMNAKLMQQYIEFVADRLLVALGNKKYYHAQQPFGFMENISLGGKT 372
Query: 296 NFFEKRVGEYQKASVMSS 313
NFFEKRVG+YQKA V+SS
Sbjct: 373 NFFEKRVGDYQKAGVVSS 390
>gi|294659365|ref|XP_461732.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
gi|199433907|emb|CAG90185.2| DEHA2G04268p [Debaryomyces hansenii CBS767]
Length = 426
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EEPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DL +D W E L +E++F+
Sbjct: 101 EEPLLIENTRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNEKLNNNERYFI 160
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ +LAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 161 SRILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 220
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AI+ +PC+ KKA WAL WI D F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 221 KEADFLFNAIDNIPCIKKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFASIFWLK 280
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L+ + V+ ++ EAV IE+EF DA
Sbjct: 281 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPDAVIVERIITEAVTIEKEFFVDA 340
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 341 LPISLLGMNCNLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 400
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+S + ++ F DEDF
Sbjct: 401 DYQKAGVMASTTDSKSSNSFSFDEDF 426
>gi|449549663|gb|EMD40628.1| hypothetical protein CERSUDRAFT_121331 [Ceriporiopsis subvermispora
B]
Length = 425
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/336 (64%), Positives = 252/336 (75%), Gaps = 10/336 (2%)
Query: 4 IPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
+PE EPLL + RF +FPIQY +IW YKKAEASFWTAEE+DLS D WE L +E
Sbjct: 90 LPEHMEPLLMDSKRRFVLFPIQYHEIWRFYKKAEASFWTAEEIDLSHDHWDWEHKLNDNE 149
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F++HVLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 150 RWFISHVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENIHSETYSLLIDTY 209
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ E+ LF AIETVPC+ KKA WAL WI D TFAERL+AFA VEGIFFSGSF +I
Sbjct: 210 IKEQHEREHLFDAIETVPCIKKKADWALRWISDKQSTFAERLVAFAAVEGIFFSGSFASI 269
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEG+H DFACLL+ LR + V ++ EAV IE+EF
Sbjct: 270 FWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFQHLRRRPHPSVVLKIIAEAVAIEQEF 329
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALP AL+GMN LM QYIEFVADRLL +LG K Y NPFD+M+LISLQGKTNFFE
Sbjct: 330 LTDALPVALIGMNAPLMCQYIEFVADRLLVSLGNEKHYNSPNPFDFMDLISLQGKTNFFE 389
Query: 300 KRVGEYQKASVMSSLNGNG------GNHVFKIDEDF 329
KRV +Y KA+ +++ N + F +DEDF
Sbjct: 390 KRVSDYSKANFQRAMSDNDVSTEATTSRAFTLDEDF 425
>gi|291412327|ref|XP_002722439.1| PREDICTED: ribonucleotide reductase M2 polypeptide [Oryctolagus
cuniculus]
Length = 400
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/318 (66%), Positives = 251/318 (78%), Gaps = 5/318 (1%)
Query: 13 NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFA 72
NP RF + I+ IW KK EASFWTAEEVDLS+D++HWEAL +E++F++HVLAFFA
Sbjct: 87 NPCRFSILTIESYGIWTRNKKGEASFWTAEEVDLSKDIQHWEALKEEERYFISHVLAFFA 146
Query: 73 ASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
ASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKD E+ LF+
Sbjct: 147 ASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFN 206
Query: 133 AIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGL
Sbjct: 207 AIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGL 266
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
TFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AV IE+EF+ +ALP L+GM
Sbjct: 267 TFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIIVNAVRIEQEFLTEALPVKLIGM 326
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N LM QYIEFVADRLL LG+ K++ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VM
Sbjct: 327 NCALMKQYIEFVADRLLLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVM 386
Query: 312 SSLNGNGGNHVFKIDEDF 329
SS N F +D DF
Sbjct: 387 SSPTENS----FTLDADF 400
>gi|260950985|ref|XP_002619789.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
gi|238847361|gb|EEQ36825.1| hypothetical protein CLUG_00948 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/327 (63%), Positives = 253/327 (77%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+D+ W+ +T +E+ F+
Sbjct: 93 DEPLLVENKRRFVLFPIKYNEIWQMYKKAEASFWTAEEIDLSKDINDWKNRMTDNERFFI 152
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL+++YIKD
Sbjct: 153 SRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDSYIKDP 212
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AIE +PC+ KKA WAL WI D FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 213 KEADFLFNAIENIPCIKKKAEWALRWIADDEALFAERLVAFAAVEGIFFSGSFASIFWLK 272
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L + + V+ ++ EAV IE+E+ DA
Sbjct: 273 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNRPNPAIVEKIITEAVTIEKEYFTDA 332
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 333 LPASLLGMNCDLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 392
Query: 304 EYQKASVMSSLN-GNGGNHVFKIDEDF 329
+YQKA VM+ N + + F DEDF
Sbjct: 393 DYQKAGVMAQTNDASASKNAFSFDEDF 419
>gi|448513504|ref|XP_003866973.1| Rnr21 ribonucleoside-diphosphate reductase [Candida orthopsilosis
Co 90-125]
gi|380351311|emb|CCG21535.1| Rnr21 ribonucleoside-diphosphate reductase [Candida orthopsilosis
Co 90-125]
Length = 422
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 213/326 (65%), Positives = 252/326 (77%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EEPLL N R+ MFPI+Y +IW+MYKKAEASFWTAEE+DL +DL W E L +E+ F+
Sbjct: 98 EEPLLKENTRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDLHDWREKLNDNERFFI 157
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+LAFFAASDGIV ENL F EVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIKD
Sbjct: 158 GRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 217
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AIET+P + KKA WA+ WI SE FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 218 KEADFLFNAIETIPQIKKKADWAIRWIQDSEALFAERLVAFAAVEGIFFSGSFASIFWLK 277
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ + + V+ ++ EAVEIE+EF DA
Sbjct: 278 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQHRPDPKIVERIITEAVEIEKEFFTDA 337
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 338 LPVSLLGMNCKLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 397
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ N F DEDF
Sbjct: 398 DYQKAGVMAKSENKDAN-AFAFDEDF 422
>gi|146418573|ref|XP_001485252.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
6260]
gi|146390725|gb|EDK38883.1| hypothetical protein PGUG_02981 [Meyerozyma guilliermondii ATCC
6260]
Length = 418
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/329 (64%), Positives = 253/329 (76%), Gaps = 5/329 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
EEPLL N RF MFPI+Y +IW+MYKKAEASFWTAEE+DL +D+ W L +E++F+
Sbjct: 90 EEPLLMENTRRFVMFPIKYHEIWKMYKKAEASFWTAEEIDLGKDMHDWNNRLNDNERYFI 149
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ +LAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 150 SRILAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 209
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AIE +PC+ KKA WAL WI D F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 210 KEADFLFNAIENIPCIKKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFASIFWLK 269
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELI RDEGLH DFACLL+S L+ + E V+ ++ EAV+IE+EF DA
Sbjct: 270 KRGLMPGLSFSNELICRDEGLHTDFACLLFSHLQNRPDPEIVEKIITEAVDIEKEFFTDA 329
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QY+EFVADRLL ALG K+Y VANPFD+ME ISL GKTNFFEKRV
Sbjct: 330 LPISLLGMNCKLMCQYVEFVADRLLVALGNKKIYNVANPFDFMENISLAGKTNFFEKRVS 389
Query: 304 EYQKASVMSSLNGNGGNHV---FKIDEDF 329
+YQKA VM+ N + V F DEDF
Sbjct: 390 DYQKAGVMAKSNADANAPVADAFAFDEDF 418
>gi|224000239|ref|XP_002289792.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975000|gb|EED93329.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 335
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/316 (63%), Positives = 247/316 (78%), Gaps = 3/316 (0%)
Query: 7 EPLLAPNPD--RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
EP+ + + RF +FPI YP +W MYK+ ASFWTA+E+DLS DL W + L DE+HF
Sbjct: 1 EPICRTDEEGSRFSLFPIAYPDLWSMYKQHVASFWTADEIDLSADLSDWHKKLNPDERHF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++ VLAFFA +DGIV+ENLA RF EV V EAR FYGFQ+A+E+IH E Y LL++TYI D
Sbjct: 61 ISMVLAFFAGADGIVVENLAERFCREVTVPEARCFYGFQMAMESIHQETYCLLIDTYITD 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ RLF A TVP V +KA+WA +I +FAERL+AFA VEGIFFSGSFCAIFWLK
Sbjct: 121 PKVRERLFSAHATVPSVERKASWAQRYIGSKASFAERLVAFAAVEGIFFSGSFCAIFWLK 180
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLHC FAC LYS L+ KLS+E ++ ++ EAV++E+ F+CDA
Sbjct: 181 KRGLMPGLTFSNELISRDEGLHCSFACQLYSKLKLKLSQEEIQTIINEAVDVEKSFICDA 240
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QYIEFVADR+L LGY +YG NPFDWM++ISL+GKTNFFEKRVG
Sbjct: 241 LPVSLIGMNSRLMAQYIEFVADRMLTDLGYQAMYGSKNPFDWMDMISLEGKTNFFEKRVG 300
Query: 304 EYQKASVMSSLNGNGG 319
EYQK+ VM+SL G
Sbjct: 301 EYQKSGVMASLEGKSA 316
>gi|365961083|ref|YP_004942650.1| ribonucleoside-diphosphate reductase [Flavobacterium columnare ATCC
49512]
gi|365737764|gb|AEW86857.1| ribonucleoside-diphosphate reductase [Flavobacterium columnare ATCC
49512]
Length = 325
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/325 (64%), Positives = 255/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L N DRF +FPI++ IWE YKK EASFWTAEE+DL QDL W L+ DEK+F+
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNTKLSEDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKDDV 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LFHAIE P + KKA WAL WI S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDQLFHAIEVFPAIKKKAEWALRWI-SSDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+++ER+ ++ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVTKERITEIIVDALNIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LG K++ NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLIELGCAKIFNATNPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N H F +D DF
Sbjct: 304 YQKAGVM---NNEEDAHKFSLDADF 325
>gi|50286273|ref|XP_445565.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524870|emb|CAG58476.1| unnamed protein product [Candida glabrata]
Length = 400
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 249/326 (76%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL +PDR +FPI+Y +IW+ YK+AEASFWTAEE+DLS+DL W L +E+ F+
Sbjct: 75 DEPLLNDDPDRLTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRLNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TE + EA+AFYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEAVIPEAKAFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI SE FAERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIANSEALFAERLVAFAAIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L K E V+ +V EAVEIE+ + DA
Sbjct: 255 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLNHKPDPEVVERIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNAQLMNQYVEFVADRLLVAFGNKKVYNVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VMS G F +DEDF
Sbjct: 375 DYQKAGVMSKAQNTEGGGAFSLDEDF 400
>gi|307192386|gb|EFN75622.1| Ribonucleoside-diphosphate reductase subunit M2 [Harpegnathos
saltator]
Length = 344
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/308 (68%), Positives = 249/308 (80%), Gaps = 3/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQ-DLRHWE-ALTADEKHFV 64
EPLL P+RF +FPI+YP IW+MYKKA ASFWT EEV L + D + WE L +DE++F+
Sbjct: 18 EPLLQEEPNRFVIFPIRYPDIWDMYKKAVASFWTIEEVPLHKLDKKDWEEKLNSDERYFI 77
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EV+++EAR FYGFQIAIENIHSEMYSLL+ETYI D
Sbjct: 78 SHVLAFFAASDGIVNENLIERFCQEVKISEARCFYGFQIAIENIHSEMYSLLIETYISDL 137
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK+ LF+AIET+PCV KKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWLK
Sbjct: 138 KEKDFLFNAIETLPCVTKKANWALNWINHESATFPERIVAFAAVEGIFFSGSFAAIFWLK 197
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELISRDEGLHCDFACL++ + K S ERVK ++ +AVEIE+EF+ A
Sbjct: 198 KRGVMPGLTFSNELISRDEGLHCDFACLMFKHVIQKPSFERVKTIIMDAVEIEKEFLTQA 257
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM YIEFVADRL ALG+ K+Y NPF +M+ ISL+GKTNFFEK+VG
Sbjct: 258 LPVKLIGMNCTLMCTYIEFVADRLFVALGFDKVYNSENPFSFMDFISLEGKTNFFEKKVG 317
Query: 304 EYQKASVM 311
EY+K VM
Sbjct: 318 EYKKFGVM 325
>gi|85817069|gb|EAQ38253.1| ribonucleoside-diphosphate reductase small chain [Dokdonia
donghaensis MED134]
Length = 328
Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 256/325 (78%), Gaps = 3/325 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+LA N DRF +FPIQ+ IWE YKK+EASFWTAEE+DL QDL W+ LT DE++F+
Sbjct: 5 EPILAENKDRFVIFPIQHDDIWEWYKKSEASFWTAEEIDLHQDLVDWKGKLTDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF+A+E P + KKA WAL WID S +FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDKLFNALENFPAIKKKADWALKWID-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER+ ++ A++IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERITEIIVNALDIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+E+V DRLL L K+Y ANPFD+M++ISLQGKTNFFEKRVGE
Sbjct: 244 PVSLIGMNSNLMTQYLEYVTDRLLTELDCEKVYNTANPFDFMDMISLQGKTNFFEKRVGE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V+ + +G D F
Sbjct: 304 YQKAGVVKDKDDDGSGQSISFDASF 328
>gi|426198205|gb|EKV48131.1| hypothetical protein AGABI2DRAFT_116955 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 206/329 (62%), Positives = 250/329 (75%), Gaps = 5/329 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + RF +FPIQYP+IW YKKA+ASFWT EE+DLS D+ W L DE+ F+
Sbjct: 37 QEPLLKESQRRFVLFPIQYPEIWRYYKKAQASFWTVEEIDLSHDITDWAYRLNKDERRFI 96
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQVAEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 97 SHILAFFAASDGIVNENLVERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 156
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLK 183
DE+ LF A+ET+P + +KA WAL WI +FAERL+AFA VEG+FFSGSF AIFW+K
Sbjct: 157 DERKHLFDAVETIPTIKRKAVWALRWISSRGLSFAERLVAFAAVEGVFFSGSFAAIFWIK 216
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI+RDEG+H DFACLL++ LR + RV ++ EAV IE++F DA
Sbjct: 217 KRGLMPGLTFSNELITRDEGMHTDFACLLFTHLRRRPHPNRVLEIITEAVAIEKDFFGDA 276
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM QYIEFVADRLL +LG K Y NPFD+ME+ISLQGK NFFEKRV
Sbjct: 277 LPVALIGMNSKLMCQYIEFVADRLLVSLGNAKYYHATNPFDFMEMISLQGKANFFEKRVS 336
Query: 304 EYQKASVMSS---LNGNGGNHVFKIDEDF 329
EY +A + S L+ + +F ++DF
Sbjct: 337 EYARAHINHSSPELSSKHTHRIFTTEDDF 365
>gi|164659270|ref|XP_001730759.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
gi|159104657|gb|EDP43545.1| hypothetical protein MGL_1758 [Malassezia globosa CBS 7966]
Length = 397
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 256/328 (78%), Gaps = 4/328 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEP+L N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W+ +T E+HFV
Sbjct: 70 EEPILKENKGRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLSKDLYDWDNRMTDPERHFV 129
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ EAR FYGFQI +ENIHSE YSLL++TYI++
Sbjct: 130 SHVLAFFAASDGIVNENLVERFSAEVQATEARCFYGFQIMMENIHSETYSLLIDTYIREP 189
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ ++ LF+AIETVP V +KA WAL WI D +F+ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 190 ERRDFLFNAIETVPVVKQKADWALRWISDHRASFSERLVAFAAVEGIFFSGSFASIFWLK 249
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGL+FSNELISRDEGLH DFACLL+S L+ + + V ++ EAV+IE++F+ DA
Sbjct: 250 KRGLMPGLSFSNELISRDEGLHTDFACLLFSHLKKRAHPDTVNRIITEAVDIEQDFLTDA 309
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K Y NPFD+ME ISLQGK+NFFE+RVG
Sbjct: 310 LPVSLIGMNARLMCQYIEFVADRLLVALGNPKHYNSTNPFDFMENISLQGKSNFFERRVG 369
Query: 304 EYQKASVMSSLN--GNGGNHVFKIDEDF 329
+Y KA V + + G + F + EDF
Sbjct: 370 DYAKAGVARADDETPTQGTNEFSLSEDF 397
>gi|384096999|ref|ZP_09998120.1| ribonucleoside-diphosphate reductase small chain, partial
[Imtechella halotolerans K1]
gi|383836967|gb|EID76367.1| ribonucleoside-diphosphate reductase small chain, partial
[Imtechella halotolerans K1]
Length = 337
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/325 (64%), Positives = 256/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPIQ+ IWE YKK EA FWTAEE+DL QDL W L+ DE++F+
Sbjct: 17 EPILQENKDRFVIFPIQHKDIWEWYKKQEACFWTAEEIDLHQDLTDWNNKLSDDERYFIK 76
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 77 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 136
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN LF AIE P + KKA WAL WI+ S +FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 137 EKNILFKAIENFPAIKKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+ + L + +S+ER+K ++ +A+ IEREF+ ++L
Sbjct: 196 GLMPGLTFSNELISRDEGMHCDFAVHLHNNHLISPVSKERIKEIIVDALNIEREFITESL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL LG K+Y V NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 256 PVSLIGMNSKLMTQYLEFVTDRLLVELGCEKVYNVTNPFDFMDMISLQGKTNFFEKRVSE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM+ N GN + D DF
Sbjct: 316 YQKAGVMN--NDTEGNKI-SFDADF 337
>gi|410955834|ref|XP_003984555.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Felis
catus]
Length = 297
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/301 (69%), Positives = 247/301 (82%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWTAEEVDLS+D++HWE+L A+E++F++HVLAFFAASDGIV ENL RF E
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWESLKAEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKD E+ LF+AIET+PCV KKA WAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPREREFLFNAIETMPCVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKESTYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL++ L K SE+RVK ++ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+
Sbjct: 181 ACLMFKHLVHKPSEQRVKEIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
LG+GK++ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D D
Sbjct: 241 LELGFGKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|406603358|emb|CCH45150.1| Ribonucleoside-diphosphate reductase small chain [Wickerhamomyces
ciferrii]
Length = 421
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/326 (64%), Positives = 247/326 (75%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
+EPLL N RF +FPI+Y +IW+ YKKAEASFWTAEE+DLS+D+ W E L +E+ F+
Sbjct: 96 DEPLLVENKRRFVLFPIKYHEIWQAYKKAEASFWTAEEIDLSKDIHDWNERLNDNERFFI 155
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 156 SRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 215
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
+ LF+AIET+PC+ +KA WAL WI E F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 216 KQAEYLFNAIETIPCIKEKADWALRWIADEEALFGERLVAFAAVEGIFFSGSFASIFWLK 275
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ K SEE V+ ++ EAV IE E+ DA
Sbjct: 276 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPSEEIVEKIITEAVSIESEYFTDA 335
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QY+EF ADRLL ALG K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 336 LPASLLGMNAKLMCQYVEFCADRLLVALGNKKFYNVTNPFDFMENISLAGKTNFFEKRVS 395
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ F DEDF
Sbjct: 396 DYQKAGVMAGTEKTESKDAFAFDEDF 421
>gi|397643211|gb|EJK75718.1| hypothetical protein THAOC_02551 [Thalassiosira oceanica]
Length = 466
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/315 (63%), Positives = 245/315 (77%), Gaps = 1/315 (0%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
RF +FPI+YP +W +YK+ ASFWTA+E+DLS DL HW L +DE+HF++ VLAFFA +
Sbjct: 146 RFSLFPIEYPDLWSLYKQHVASFWTADEIDLSADLTHWNNKLNSDERHFISMVLAFFAGA 205
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
DGIV+ENL RF EV V EAR FYGFQ+A+E+IH E YSLL+++YI D E+ LF A
Sbjct: 206 DGIVMENLVERFCREVTVPEARCFYGFQMAMESIHQETYSLLIDSYIDDPKEREVLFSAH 265
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
TVP V +KA WA +I + TFAERLIAFA VEGIFFSGSFCAIFWLKKRGLMPGLTFS
Sbjct: 266 STVPSVERKAIWAQKYIGSNATFAERLIAFATVEGIFFSGSFCAIFWLKKRGLMPGLTFS 325
Query: 195 NELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGE 254
NELISRDEGLHC FAC LYS L+ KL++E + +++EAV++E+ F+CDALP +L+GMN
Sbjct: 326 NELISRDEGLHCSFACQLYSKLKNKLTQEHINRIIREAVDVEKSFICDALPVSLIGMNSG 385
Query: 255 LMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSL 314
LM QYIEFVADR+L LGY LY NPFDWM++ISL+GKTNFFEKRVGEYQK+ VM++
Sbjct: 386 LMGQYIEFVADRMLTDLGYEPLYRSKNPFDWMDMISLEGKTNFFEKRVGEYQKSGVMANF 445
Query: 315 NGNGGNHVFKIDEDF 329
G +++ F
Sbjct: 446 GGEAAGAGMSVNDSF 460
>gi|354546840|emb|CCE43572.1| hypothetical protein CPAR2_212160 [Candida parapsilosis]
Length = 422
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/326 (65%), Positives = 252/326 (77%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EEPLL N R+ MFPI+Y +IW+MYKKAEASFWTAEE+DL +DL W E L +E+ F+
Sbjct: 98 EEPLLKENKRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDLHDWREKLNDNERFFI 157
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+LAFFAASDGIV ENL F EVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIKD
Sbjct: 158 GRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 217
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AIET+P + KKA WA+ WI S+ FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 218 KEADFLFNAIETIPQIKKKADWAIRWIQDSDALFAERLVAFAAVEGIFFSGSFASIFWLK 277
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ + + V+ ++ EAVEIE+EF DA
Sbjct: 278 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQHRPDPKIVERIITEAVEIEKEFFTDA 337
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 338 LPVSLLGMNCKLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 397
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ N F DEDF
Sbjct: 398 DYQKAGVMAKSENKDAND-FAFDEDF 422
>gi|426223128|ref|XP_004005729.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Ovis
aries]
Length = 297
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/301 (69%), Positives = 246/301 (81%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWTAEEVDLS+D++HWEAL +E++F++HVLAFFAASDGIV ENL RF E
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWEALKPEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKDS E+ LF+AIET+PCV KKA WAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL++ L K SE+RVK ++ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+
Sbjct: 181 ACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
LG+ K++ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D D
Sbjct: 241 LELGFSKVFKVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|241951066|ref|XP_002418255.1| ribonucleoside-diphosphate reductase small chain 1, putative;
ribonucleotide reductase r2 subunit 1, putative;
ribonucleotide reductase small subunit 1, putative
[Candida dubliniensis CD36]
gi|223641594|emb|CAX43555.1| ribonucleoside-diphosphate reductase small chain 1, putative
[Candida dubliniensis CD36]
Length = 413
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/326 (64%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL N R+ MFPI+Y +IW YKKAEASFWTAEE+DLS+DL W L +E++FV
Sbjct: 89 EEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNKLNENERYFV 148
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIKD
Sbjct: 149 SRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 208
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AI +PC+ KKA WA+ WI E + ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 209 QEADYLFNAIANIPCIQKKADWAIKWIQDDEALYGERLVAFAAVEGIFFSGSFASIFWLK 268
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ + S E V+ ++ EAV++E+E+ DA
Sbjct: 269 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQNRPSPEIVEKIITEAVDVEKEYFTDA 328
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 329 LPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 388
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ N F DEDF
Sbjct: 389 DYQKAGVMAKTE-NKEADAFTFDEDF 413
>gi|401886060|gb|EJT50123.1| ribonucleoside-diphosphate reductase [Trichosporon asahii var.
asahii CBS 2479]
gi|406697819|gb|EKD01069.1| ribonucleoside-diphosphate reductase [Trichosporon asahii var.
asahii CBS 8904]
Length = 420
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/330 (62%), Positives = 255/330 (77%), Gaps = 6/330 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + DRF +FPI+Y +IW+MYKKA+ASFWTAEE++L+ DL W+ L +E++F+
Sbjct: 91 DEPLLKESTDRFVLFPIKYREIWQMYKKAQASFWTAEEINLAPDLHDWDNKLNDNERYFI 150
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVLAFFAASDGIV ENL RF EVQ++EA+ FYGFQI +ENIHSE YSLL++TYI+D+
Sbjct: 151 EHVLAFFAASDGIVNENLVERFCGEVQISEAKTFYGFQIMMENIHSETYSLLIDTYIRDN 210
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ LF AIET+PC+ KKA WAL WI D +F ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 211 ARRQYLFQAIETIPCIKKKADWALRWISDQRSSFGERLIAFAAVEGIFFSGSFASIFWLK 270
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + + + ++KEAV+IE+EF+ +A
Sbjct: 271 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTINKIIKEAVKIEQEFLTEA 330
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K++ ANPFD+ME+ISLQGK NFFE RV
Sbjct: 331 LPVSLIGMNAKLMCQYIEFVADRLLVALGNDKVWNSANPFDFMEMISLQGKANFFESRVS 390
Query: 304 EYQKASVMSSLNGN----GGNHVFKIDEDF 329
Y K+ V S+ F +DEDF
Sbjct: 391 AYSKSGVNQSVGKTAEEAASGRAFSLDEDF 420
>gi|408491217|ref|YP_006867586.1| ribonucleotide reductase of class Ia (aerobic), beta subunit NrdF
[Psychroflexus torquis ATCC 700755]
gi|408468492|gb|AFU68836.1| ribonucleotide reductase of class Ia (aerobic), beta subunit NrdF
[Psychroflexus torquis ATCC 700755]
Length = 326
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 204/308 (66%), Positives = 251/308 (81%), Gaps = 3/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L N +RF +FPI +P IWE YKK EASFWTAEE+DL QD+ W+ L+ DE++F+
Sbjct: 5 EPILEENKNRFVLFPITHPDIWEWYKKCEASFWTAEEIDLQQDITDWKTKLSKDEQYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ EA+ FYGFQI +ENIHSE YSLL++TY+ D
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYTEAKFFYGFQIMVENIHSETYSLLIDTYVDDDK 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF AIE P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDLLFKAIENFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +ER++A++ +A+ IEREFV ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNEHLVNQVPKERIRAIIVDALTIEREFVTESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LG K YG ANPFD+M++ISLQGKTNFFEKRVGE
Sbjct: 244 PVSLIGMNSNLMTQYLEFVADRLLFELGCDKEYGTANPFDFMDMISLQGKTNFFEKRVGE 303
Query: 305 YQKASVMS 312
YQKA VM+
Sbjct: 304 YQKAGVMN 311
>gi|226294144|gb|EEH49564.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides
brasiliensis Pb18]
Length = 325
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/318 (67%), Positives = 249/318 (78%), Gaps = 16/318 (5%)
Query: 26 QIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAG 84
QIW+MYKKAEASFWTAEEVDLS+DL W L DE++F++HVLAFFAASDGIV ENL
Sbjct: 10 QIWQMYKKAEASFWTAEEVDLSKDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLVE 69
Query: 85 RFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKA 144
RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+ ++ LF AI+T+PC+ KKA
Sbjct: 70 RFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKA 129
Query: 145 TWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 203
WA+ WI+ E TFA+RL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG
Sbjct: 130 DWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEG 189
Query: 204 LHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFV 263
LH DFACLL+S LR + S E V+ ++ EAV IE+EF+ DALPCAL+GMN +LM QYIEFV
Sbjct: 190 LHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMNAKLMCQYIEFV 249
Query: 264 ADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSL--------- 314
ADRLL ALG K+Y NPFD+M+ ISL GKTNFFEKRVG+YQKA VM+S
Sbjct: 250 ADRLLVALGNKKVYNSTNPFDFMDNISLTGKTNFFEKRVGDYQKAGVMASTKKEAASDDA 309
Query: 315 ---NGNGGNHVFKIDEDF 329
N NGG F DEDF
Sbjct: 310 EQQNENGG--AFTFDEDF 325
>gi|356927835|gb|AET42625.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 202]
Length = 325
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/324 (63%), Positives = 247/324 (76%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NPDRF +FPI + I+E YKKAEAS W E+D+S D W LT +E+HF+ +
Sbjct: 3 EPLLNDNPDRFALFPIVHKDIYEEYKKAEASIWGVAEIDISTDKIDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA +DG+VLENLA F TEVQ EAR FY FQI IE +H+E Y+++L+T++ D DE
Sbjct: 63 ILAFFATADGVVLENLATNFATEVQYPEARCFYNFQIFIETVHAETYAMMLQTFVDDRDE 122
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
LF AI T+P + +KA WAL WI +FAERLIAFA VEGIFFSG+FCAIFWLKKRG
Sbjct: 123 LRSLFRAIHTIPSIKQKADWALKWISSDRSFAERLIAFAVVEGIFFSGAFCAIFWLKKRG 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
LMPGLTFSNELISRDEGLH DFAC+LY + KL E V +V AVE+ER+F+C+ALP
Sbjct: 183 LMPGLTFSNELISRDEGLHTDFACMLYRDHIINKLPYETVLDIVTSAVELERQFICEALP 242
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N E MS YI+FVADRL +LGY K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINSESMSTYIKFVADRLFISLGYPKHYKVTNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM +LN +G F +DEDF
Sbjct: 303 QKAGVMEALN-DGPKQGFTLDEDF 325
>gi|387592558|gb|EIJ87582.1| ribonucleotide reductase small subunit RnrA [Nematocida parisii
ERTm3]
gi|387595184|gb|EIJ92809.1| ribonucleotide reductase small subunit RnrA [Nematocida parisii
ERTm1]
Length = 343
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/324 (65%), Positives = 253/324 (78%), Gaps = 8/324 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L + +RF +FPI++ IW MYK A A FWTAEEVDLS D WE L A+E+HF+++
Sbjct: 27 EPILQESNNRFVIFPIEHHDIWAMYKDAVAVFWTAEEVDLSNDQADWEKLNANERHFISY 86
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ++EAR FYGFQI IENIH+EMYSLL++TYIKD+ E
Sbjct: 87 VLAFFAASDGIVNENLVERFASEVQISEARCFYGFQIMIENIHAEMYSLLIDTYIKDTAE 146
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN LF A+E +P + KKA WAL WI D +FA+RL+AFACVEGIFFSGSF +IFWLKKR
Sbjct: 147 KNFLFQAMENIPVIKKKADWALRWISDKESSFADRLVAFACVEGIFFSGSFASIFWLKKR 206
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL+S L K + +K +V EAVEIE+EF+ DALP
Sbjct: 207 GLMPGLTFSNELISRDEGLHCDFACLLHSHLINKC--KNIKKIVLEAVEIEKEFLTDALP 264
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N + M QYIEFVADRLL AL K+Y NPFD+MELISL+ K NFFE RVGEY
Sbjct: 265 VSLIGINSDSMCQYIEFVADRLLIALNEEKVYNTPNPFDFMELISLRRKANFFEMRVGEY 324
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
++ASV G F +D+DF
Sbjct: 325 KRASV-----GAPQAQGFAMDDDF 343
>gi|68481406|ref|XP_715342.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
gi|68481537|ref|XP_715277.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
gi|46436893|gb|EAK96248.1| hypothetical protein CaO19.13223 [Candida albicans SC5314]
gi|46436961|gb|EAK96315.1| hypothetical protein CaO19.5801 [Candida albicans SC5314]
gi|238882096|gb|EEQ45734.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
albicans WO-1]
Length = 413
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL N R+ MFPI+Y +IW YKKAEASFWTAEE+DLS+DL W L +E++F+
Sbjct: 89 EEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNKLNENERYFI 148
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIKD
Sbjct: 149 SRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 208
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AI +PC+ KKA WA+ WI E + ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 209 QEADYLFNAIANIPCIQKKADWAIKWIQDDEALYGERLVAFAAVEGIFFSGSFASIFWLK 268
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ + S E V+ ++ EAV++E+E+ DA
Sbjct: 269 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQNRPSPEIVERIITEAVDVEKEYFTDA 328
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 329 LPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 388
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ N F DEDF
Sbjct: 389 DYQKAGVMAKTE-NKEADAFTFDEDF 413
>gi|225712968|gb|ACO12330.1| Ribonucleoside-diphosphate reductase small chain [Lepeophtheirus
salmonis]
Length = 335
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 246/323 (76%), Gaps = 3/323 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L PN ++ MFPI Y IW MYKKA A+FWT EEVDLS+DL W L DEKHF+++
Sbjct: 16 EIILTPNNSKYVMFPIVYKDIWFMYKKALATFWTVEEVDLSKDLMDWAKLNKDEKHFISN 75
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+AEAR+FYGFQI IENIHSEMYSLL++TYI+D E
Sbjct: 76 VLAFFAASDGIVNENLLERFASEVQIAEARSFYGFQIMIENIHSEMYSLLIDTYIEDDKE 135
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K++LF++I T+ CV KKA WAL WI G + FA RL+AFA VEGIFFSGSF ++FWLKKRG
Sbjct: 136 KDKLFNSILTIECVKKKAEWALRWITGDKPFATRLVAFAAVEGIFFSGSFASLFWLKKRG 195
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEG H DFACLLYS L KL + V ++KE VEIE+EFV D+LP
Sbjct: 196 LMPGLTFSNELISRDEGSHTDFACLLYSHLENKLDPKYVLQIIKEGVEIEKEFVADSLPV 255
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN ++M YIEFVAD LL L K Y NPF++M+ IS+ GKTNFF+KRV EYQ
Sbjct: 256 GLIGMNAKMMKNYIEFVADNLLENLNIEKYYHTKNPFNFMDNISMTGKTNFFDKRVSEYQ 315
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
+ V S + FK+++DF
Sbjct: 316 RPFVASE---KENDSTFKLEDDF 335
>gi|448118274|ref|XP_004203456.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|448120689|ref|XP_004204039.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|359384324|emb|CCE79028.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
gi|359384907|emb|CCE78442.1| Piso0_001065 [Millerozyma farinosa CBS 7064]
Length = 425
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 249/325 (76%), Gaps = 2/325 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DL +D W+ + +E+ F++
Sbjct: 101 EPLLVENKRRFVLFPIRYHEIWQMYKKAEASFWTAEEIDLGKDTHDWQNKMNENERFFIS 160
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+LAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 161 RILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPK 220
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AIE +PC+ KKA WAL WI D F ERL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 221 EADFLFNAIENIPCIQKKADWALRWINDDDALFGERLVAFAAVEGIFFSGSFASIFWLKK 280
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL+S L + + E V+ ++ EAV IE+EF DAL
Sbjct: 281 RGLMPGLTFSNELICRDEGLHTDFACLLFSHLENRPNPEIVEKIITEAVGIEKEFFTDAL 340
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 341 PVSLLGMNAKLMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVSD 400
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM+ + + + F D+DF
Sbjct: 401 YQKAGVMAKASDSKVDTSFSFDDDF 425
>gi|295670491|ref|XP_002795793.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides sp.
'lutzii' Pb01]
gi|226284878|gb|EEH40444.1| ribonucleotide reductase R2 subunit variant [Paracoccidioides sp.
'lutzii' Pb01]
Length = 325
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/318 (67%), Positives = 249/318 (78%), Gaps = 16/318 (5%)
Query: 26 QIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAG 84
QIW+MYKKAEASFWTAEE+DLS+DL W L DE++F++HVLAFFAASDGIV ENL
Sbjct: 10 QIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFISHVLAFFAASDGIVNENLVE 69
Query: 85 RFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKA 144
RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+ ++ LF AI+T+PC+ KKA
Sbjct: 70 RFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEPKQRTYLFDAIDTIPCIRKKA 129
Query: 145 TWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEG 203
WA+ WI+ E TFA+RL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG
Sbjct: 130 DWAIRWIEDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEG 189
Query: 204 LHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFV 263
LH DFACLL+S LR + S E V+ ++ EAV IE+EF+ DALPCAL+GMN +LM QYIEFV
Sbjct: 190 LHTDFACLLFSHLRHRPSPEAVQKIITEAVAIEQEFLTDALPCALLGMNAKLMCQYIEFV 249
Query: 264 ADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSL--------- 314
ADRLL ALG K+Y NPFD+M+ ISL GKTNFFEKRVG+YQKA VM+S
Sbjct: 250 ADRLLVALGNKKVYNSTNPFDFMDNISLTGKTNFFEKRVGDYQKAGVMASTKKEAASEDA 309
Query: 315 ---NGNGGNHVFKIDEDF 329
N NGG F DEDF
Sbjct: 310 EQQNENGG--AFTFDEDF 325
>gi|378754645|gb|EHY64675.1| ribonucleoside-diphosphate reductase, beta subunit [Nematocida sp.
1 ERTm2]
Length = 334
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/328 (64%), Positives = 255/328 (77%), Gaps = 8/328 (2%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S PEEP+L + +RF +FPI++ IW +YK A A FWTAEEVDLS+D W+ L +E+H
Sbjct: 14 SRPEEPILTESNNRFVIFPIEHHDIWALYKDAVAVFWTAEEVDLSKDQADWDNLNNNERH 73
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+++VLAFFAASDGIV ENL RF +EVQ++EAR FYGFQI IENIH+EMYSLL++TYIK
Sbjct: 74 FISYVLAFFAASDGIVNENLVERFASEVQISEARCFYGFQIMIENIHAEMYSLLIDTYIK 133
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFW 181
D+ EKN LF AIE +P + KKA WAL WI E +FA+RL+AFACVEGIFFSGSF +IFW
Sbjct: 134 DTAEKNFLFQAIENIPVIKKKADWALRWISDKEASFADRLVAFACVEGIFFSGSFASIFW 193
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACLL+S L K E + +V EAVEIE+EF+
Sbjct: 194 LKKRGLMPGLTFSNELISRDEGLHCDFACLLHSHLVNKC--ENISKIVLEAVEIEKEFLT 251
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP +L+G+N + M QYIEFVADRLL AL K++ NPFD+MELISL+ K NFFE R
Sbjct: 252 DALPVSLIGINADTMCQYIEFVADRLLLALNEEKIFNAQNPFDFMELISLRRKANFFEMR 311
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEY++ASV G F +++DF
Sbjct: 312 VGEYKRASV-----GAPQTQGFAMNDDF 334
>gi|157939640|ref|YP_001497012.1| ribonucleotide reductase [Tanapox virus]
gi|146746356|gb|ABQ43492.1| ribonucleotide reductase [Tanapox virus]
gi|146746512|gb|ABQ43647.1| ribonucleotide reductase [Tanapox virus]
Length = 325
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/328 (63%), Positives = 253/328 (77%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
+ P EP+L P +++ +FPI Y IW+MYKKA ASFWT EEVDLS+D W L+ +EK+
Sbjct: 2 NTPCEPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKN 61
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ H+LAFFAASDGIV ENLA RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 62 FIKHILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYIL 121
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFW 181
DS EKN LF+AIE + CV +KA WA WI+ + T+ ERL+AFA VEGIFFSGSF AIFW
Sbjct: 122 DSKEKNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFW 181
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
+KKRGLMPGLTFSNELISRDEGLHCDFAC+++ L V+ ++ EAV IE+ F+
Sbjct: 182 IKKRGLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLT 241
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+A+P L+GMN +LM QYIEFVADRLL LG K Y NPFD+ME ISL+GKTNFFEKR
Sbjct: 242 EAIPVKLIGMNCDLMKQYIEFVADRLLLELGCNKYYCSKNPFDFMENISLEGKTNFFEKR 301
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
V EYQK SVMS N ++VF +D DF
Sbjct: 302 VSEYQKMSVMS----NKKDNVFSLDIDF 325
>gi|409080029|gb|EKM80390.1| hypothetical protein AGABI1DRAFT_39266 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 396
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/322 (63%), Positives = 244/322 (75%), Gaps = 2/322 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + RF +FP+QYP+IW YKKA+ASFWT EE+DLS D+ W L DE+ F+
Sbjct: 37 QEPLLKESQRRFVLFPVQYPEIWRYYKKAQASFWTVEEIDLSHDITDWAYRLNKDERRFI 96
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFAASDGIV ENL RF EVQVAEAR FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 97 SHILAFFAASDGIVNENLVERFSNEVQVAEARCFYGFQIMMENIHSETYSLLIDTYIKDP 156
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLK 183
DE+ LF A+ET+P + +KA WAL WI +FAERL+AFA VEG+FFSGSF AIFW+K
Sbjct: 157 DERKHLFDAVETIPTIKRKAVWALRWISSRGLSFAERLVAFAAVEGVFFSGSFAAIFWIK 216
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI+RDEG+H DFACLL++ LR + RV ++ EAV IE++F DA
Sbjct: 217 KRGLMPGLTFSNELITRDEGMHTDFACLLFTHLRRRPHPNRVLEIITEAVAIEKDFFGDA 276
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM QYIEFVADRLL +LG K Y NPFD+ME+ISLQGK NFFEKRV
Sbjct: 277 LPVALIGMNSKLMCQYIEFVADRLLVSLGNAKYYHATNPFDFMEMISLQGKANFFEKRVS 336
Query: 304 EYQKASVMSSLNGNGGNHVFKI 325
EY +A + S H +I
Sbjct: 337 EYARAHINHSSPELSSKHTHRI 358
>gi|190896572|gb|ACE96799.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896574|gb|ACE96800.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896576|gb|ACE96801.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896578|gb|ACE96802.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/223 (91%), Positives = 215/223 (96%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGRFM EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEE+VK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|405123346|gb|AFR98111.1| ribonucleotide reductase subunit [Cryptococcus neoformans var.
grubii H99]
Length = 389
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/329 (62%), Positives = 255/329 (77%), Gaps = 5/329 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL RF +FPI+Y +IW+MYKKA+ASFWTAEE++L+ DL WE L +E++F+
Sbjct: 61 DEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNERYFI 120
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVLAFFAASDGIV ENL RF EVQ+AEA++FYGFQI +ENIH+E YSLL++TYIKD+
Sbjct: 121 EHVLAFFAASDGIVNENLVERFSGEVQIAEAKSFYGFQIMMENIHAETYSLLIDTYIKDT 180
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+N LF A++T+PC+ KKA WAL WI D F ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 181 ARRNFLFDAMDTIPCIRKKADWALRWISDQKSCFGERLIAFAAVEGIFFSGSFASIFWLK 240
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + + + ++KEAV IE+EF+ DA
Sbjct: 241 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIAKIIKEAVIIEQEFLTDA 300
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K++ ANPFD+ME+ISLQGK NFFE RV
Sbjct: 301 LPVSLIGMNAKLMCQYIEFVADRLLVALGNEKIWNSANPFDFMEMISLQGKANFFESRVS 360
Query: 304 EYQKASVMSSLNGNGGNHV---FKIDEDF 329
Y K+ V ++ N + F +DEDF
Sbjct: 361 AYSKSGVNQAVGAADHNAIKKGFSLDEDF 389
>gi|150863757|ref|XP_001382334.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
CBS 6054]
gi|149385013|gb|ABN64305.2| small subunit of ribonucleotide reductase [Scheffersomyces stipitis
CBS 6054]
Length = 417
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/329 (63%), Positives = 253/329 (76%), Gaps = 6/329 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
+EPLL N RF +FPI+Y ++W+MYKKAEASFWTAEE+DLS+D+ W L +E+ F+
Sbjct: 90 DEPLLMENTRRFVLFPIKYNEVWQMYKKAEASFWTAEEIDLSKDITDWNNRLNDNERFFI 149
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ +LAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL+++YIKD
Sbjct: 150 SRILAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDSYIKDP 209
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AI+ +PC+ KKA WAL WI D F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 210 KEADFLFNAIDNIPCIRKKADWALRWISDDDALFGERLVAFAAVEGIFFSGSFASIFWLK 269
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL+S L+ + E V+ ++ EAV+IE+EF DA
Sbjct: 270 KKGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPDAEIVEKIITEAVKIEKEFFTDA 329
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN ELM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 330 LPSSLLGMNAELMCQYVEFVADRLLVALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 389
Query: 304 EYQKASVMS---SLNGNGGNHVFKIDEDF 329
+YQKA VM+ S N N+ F DEDF
Sbjct: 390 DYQKAGVMAKSGSDNKTPSNN-FSFDEDF 417
>gi|281204152|gb|EFA78348.1| ribonucleotide reductase-related protein [Polysphondylium pallidum
PN500]
Length = 323
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 197/303 (65%), Positives = 244/303 (80%), Gaps = 1/303 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKH 62
+ EEP+L N DRF +FPI++ +W+ YKKAEASFWTAEE+DL+ DLR W+ L +E++
Sbjct: 2 MQEEPILKENKDRFVLFPIKHQDVWKFYKKAEASFWTAEEIDLAPDLRDWQDKLNDNERY 61
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+++VLAFFAASDGIV ENLA RFM+EVQ+ EAR FYGFQIA+ENIHSE YSLL++TYI+
Sbjct: 62 FISNVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAMENIHSETYSLLIDTYIQ 121
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
+ EK +LF+AIET+PCV KKA WAL WI S +FAERL+AFA VEGIFFSGSFC+IFWL
Sbjct: 122 NPAEKTKLFNAIETIPCVQKKANWALKWISNSTSFAERLVAFAAVEGIFFSGSFCSIFWL 181
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKR LM GL SNE ISRDEGLHC FACLLYS L KL + +++++++AV+ E+EF+
Sbjct: 182 KKRNLMSGLCSSNEFISRDEGLHCQFACLLYSKLVNKLDAKTIESIIRDAVDCEKEFITQ 241
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
+LP L+GMN LMS+YIEFVAD L+ ALGY K+Y ANPFDWMELIS+ +TNFFE R
Sbjct: 242 SLPVDLIGMNNRLMSEYIEFVADHLIVALGYKKIYNTANPFDWMELISIDTRTNFFEHRN 301
Query: 303 GEY 305
Y
Sbjct: 302 TSY 304
>gi|190896524|gb|ACE96775.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896534|gb|ACE96780.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/223 (91%), Positives = 214/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|190896570|gb|ACE96798.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896582|gb|ACE96804.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/223 (91%), Positives = 214/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGRFM EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHAIETVPCVAK
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEE+VK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y ANPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNAANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|321263777|ref|XP_003196606.1| ribonucleoside-diphosphate reductase [Cryptococcus gattii WM276]
gi|317463083|gb|ADV24819.1| Ribonucleoside-diphosphate reductase, putative [Cryptococcus gattii
WM276]
Length = 401
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/329 (62%), Positives = 253/329 (76%), Gaps = 5/329 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL RF +FPI+Y +IW+MYKKA+ASFWTAEE++L+ DL WE L +E++F+
Sbjct: 73 DEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNERYFI 132
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVLAFFAASDGIV ENL RF EVQ AEA++FYGFQI +ENIH+E YSLL++TYIKD+
Sbjct: 133 EHVLAFFAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYIKDT 192
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+N LF A++T+PC+ KKA WAL WI D F ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 193 ARRNFLFDAMDTIPCIRKKADWALRWISDKRSCFGERLIAFAAVEGIFFSGSFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + + + ++KEAV IE+EF+ DA
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIARIIKEAVSIEQEFLTDA 312
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K++ NPFD+ME+ISLQGK NFFE RV
Sbjct: 313 LPVSLIGMNAKLMCQYIEFVADRLLVALGNEKIWNSTNPFDFMEMISLQGKANFFESRVS 372
Query: 304 EYQKASVMSSLNGNGGNHV---FKIDEDF 329
Y K+ V ++ N + F +DEDF
Sbjct: 373 AYSKSGVNQAVGAADHNAIKKGFSLDEDF 401
>gi|377830065|ref|YP_005296225.1| unnamed protein product [Cotia virus SPAn232]
gi|377814308|gb|AFB76927.1| ribonucleotide reductase small subunit [Cotia virus SPAn232]
Length = 331
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 250/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L + DRF +FPIQ+ IW MYK+A ASFWT +EVDLS+D+ W+ L+ DE+HF+ +
Sbjct: 12 EYILKESSDRFVIFPIQHNDIWTMYKRALASFWTVDEVDLSKDINDWKKLSNDERHFIKY 71
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF +VQ++EAR FYGFQIAIENIHSEMYSLL++TYI DS+E
Sbjct: 72 VLAFFAASDGIVNENLAKRFFNDVQLSEARCFYGFQIAIENIHSEMYSLLIDTYITDSEE 131
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN L AIET+ CV KA W WI D S TF RL+AFA VEGIFFSGSF AIFW+KKR
Sbjct: 132 KNFLLKAIETIECVKLKADWTKKWISDYSSTFGTRLVAFAAVEGIFFSGSFAAIFWIKKR 191
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL+ L+ +EE + +VK+AV IE+ F+ DA+P
Sbjct: 192 GLMPGLTFSNELISRDEGLHCDFACLLFKYLKYPPTEEVIVNIVKDAVIIEKLFLQDAIP 251
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N ELM +YIEFVADRLL L +Y +NPFD+ME ISL+GKTNFFE+RVGEY
Sbjct: 252 VKLIGINYELMCKYIEFVADRLLKELSCSTIYNTSNPFDFMENISLEGKTNFFERRVGEY 311
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM+S F +DEDF
Sbjct: 312 QKMGVMNS----NKEIKFTLDEDF 331
>gi|58260896|ref|XP_567858.1| ribonucleoside-diphosphate reductase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134116993|ref|XP_772723.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255341|gb|EAL18076.1| hypothetical protein CNBK0970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229939|gb|AAW46341.1| ribonucleoside-diphosphate reductase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 401
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/329 (62%), Positives = 253/329 (76%), Gaps = 5/329 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL RF +FPI+Y +IW+MYKKA+ASFWTAEE++L+ DL WE L +E++F+
Sbjct: 73 DEPLLKETNARFVLFPIKYHEIWQMYKKAQASFWTAEEINLAPDLHDWENKLNDNERYFI 132
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVLAFFAASDGIV ENL RF EVQ AEA++FYGFQI +ENIH+E YSLL++TYIKD+
Sbjct: 133 EHVLAFFAASDGIVNENLVERFSAEVQAAEAKSFYGFQIMMENIHAETYSLLIDTYIKDT 192
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+N LF AI+T+PC+ KKA WAL WI D F ERLIAFA VEGIFFSGSF +IFWLK
Sbjct: 193 ARRNFLFDAIDTIPCIRKKADWALRWISDKRSCFGERLIAFAAVEGIFFSGSFASIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL++ LR + + + ++KEAV IE+EF+ DA
Sbjct: 253 KRGLMPGLTFSNELISRDEGLHTDFACLLFTHLRRRPHPDTIARIIKEAVTIEQEFLTDA 312
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL A+G K++ NPFD+ME+ISLQGK NFFE RV
Sbjct: 313 LPVSLIGMNAKLMCQYIEFVADRLLVAMGNEKIWNSTNPFDFMEMISLQGKANFFESRVS 372
Query: 304 EYQKASVMSSLNGNGGNHV---FKIDEDF 329
Y K+ V ++ N + F +DEDF
Sbjct: 373 AYSKSGVNQAVGAADHNAIKKGFSLDEDF 401
>gi|193784694|dbj|BAG53847.1| unnamed protein product [Homo sapiens]
gi|193787382|dbj|BAG52588.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/301 (69%), Positives = 245/301 (81%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWTAEEVDLS+D++HWE+L +E++F++HVLAFFAASDGIV ENL RF E
Sbjct: 1 MYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKD E+ LF+AIET+PCV KKA WAL
Sbjct: 61 VQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL++ L K SEERV+ ++ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+
Sbjct: 181 ACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLM 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
LG+ K++ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D D
Sbjct: 241 LELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|374596274|ref|ZP_09669278.1| ribonucleotide reductase [Gillisia limnaea DSM 15749]
gi|373870913|gb|EHQ02911.1| ribonucleotide reductase [Gillisia limnaea DSM 15749]
Length = 325
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 256/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI++ IW+ YKK EASFWTAEE+DL QD W L ADE++F+
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDANDWNNKLNADERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF AIET P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFRAIETFPAIKKKADWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER++ ++ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNKHLVNKVPKERIREIIMDALNIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFVADRLL L K YG NPFD+M++I+LQGKTNFFEKRVGE
Sbjct: 244 PASLIGMNAKLMTQYLEFVADRLLVELECEKEYGSTNPFDFMDMINLQGKTNFFEKRVGE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N + + D DF
Sbjct: 304 YQKAGVM---NKDKDTNKISFDADF 325
>gi|163753569|ref|ZP_02160692.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
algicida OT-1]
gi|161325783|gb|EDP97109.1| ribonucleoside-diphosphate reductase 1, beta subunit [Kordia
algicida OT-1]
Length = 326
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 255/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L N DRF +FPI++ IWE YKK+EASFWTAEE+DL QDL W L DE++F+
Sbjct: 6 EPILQENKDRFVIFPIKHADIWEWYKKSEASFWTAEEIDLHQDLTDWTTKLNDDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 66 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF AIE P + KKA WAL WI+ S +FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 126 EKDKLFKAIENFPAIKKKADWALQWIE-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
G+MPGLTFSNELISRDEG+HCDFA L+ + L K+ +ER++A++ +A+ IEREF+ ++L
Sbjct: 185 GIMPGLTFSNELISRDEGVHCDFAVHLHNNHLVNKVPKERIRAIIVDALNIEREFITESL 244
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL LG K Y V+NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PVSLIGMNAKLMTQYLEFVTDRLLQELGCEKEYNVSNPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V LN F D DF
Sbjct: 305 YQKAGV---LNKEEEKDKFSFDADF 326
>gi|1710399|sp|P50649.1|RIR2_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase small subunit;
AltName: Full=Ribonucleotide reductase R2 subunit;
AltName: Full=Ribonucleotide reductase small subunit
gi|349790|gb|AAA29754.1| ribonucleotide reductase R2 subunit [Plasmodium falciparum]
Length = 322
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 248/323 (76%), Gaps = 6/323 (1%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
+L DRF ++PI YP ++ YKKAEA FWTAEE+D S DL+ +E L +EKHF+ HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVL 63
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFAASDGIVLENLA F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E+
Sbjct: 64 AFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEA--VEIEREFVCDALPC 246
GLTFSNELISRDEGLH DF CL+YSLL KL E+ V+ +VKEA VE+E+ F+C++LPC
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVEKSFICESLPC 243
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 244 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 303
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ +HVF ++ +F
Sbjct: 304 KSGVMAQ----RKDHVFCLNTEF 322
>gi|225012154|ref|ZP_03702591.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-2A]
gi|225003709|gb|EEG41682.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-2A]
Length = 325
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/309 (66%), Positives = 250/309 (80%), Gaps = 3/309 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L N +RF +FPI++ IWE YKK EASFWTAEE+DL QDL W LT DEK+F+
Sbjct: 5 EPILQENENRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNTKLTEDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDDV 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF AIE P + KKA WAL WID S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDRLFKAIEVFPAIKKKADWALRWID-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+ R+K ++ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPPARIKEILLDALTIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL LG K + V NPFD+M++ISLQGKTNFFEKRVGE
Sbjct: 244 PISLIGMNAKLMTQYLEFVTDRLLQELGLEKEFNVTNPFDFMDMISLQGKTNFFEKRVGE 303
Query: 305 YQKASVMSS 313
YQKA V++S
Sbjct: 304 YQKAGVLNS 312
>gi|12085003|ref|NP_073405.1| 20L protein [Yaba-like disease virus]
gi|56404692|sp|Q9DHU2.1|RIR2_YLDV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|12056179|emb|CAC21258.1| 20L protein [Yaba-like disease virus]
Length = 325
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/324 (64%), Positives = 251/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L P +++ +FPI Y IW+MYKKA ASFWT EEVDLS+D W L+ +EK+F+ H
Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKH 65
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI DS E
Sbjct: 66 ILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKE 125
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN LF+AIE + CV +KA WA WI+ + T+ ERL+AFA VEGIFFSGSF AIFW+KKR
Sbjct: 126 KNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKR 185
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFAC+++ L V+ ++ EAV IE+ F+ +A+P
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIP 245
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL LG K Y NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 246 VKLIGMNCDLMKQYIEFVADRLLLELGCDKYYCSKNPFDFMENISLEGKTNFFEKRVSEY 305
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK SVMS N ++VF +D DF
Sbjct: 306 QKMSVMS----NKKDNVFSLDIDF 325
>gi|190896528|gb|ACE96777.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 214/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAI+NIHSEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIDNIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|373108817|ref|ZP_09523098.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 10230]
gi|423129513|ref|ZP_17117188.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 12901]
gi|423133178|ref|ZP_17120825.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CIP 101113]
gi|423328773|ref|ZP_17306580.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 3837]
gi|371646062|gb|EHO11579.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 10230]
gi|371648563|gb|EHO14051.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 12901]
gi|371649234|gb|EHO14715.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CIP 101113]
gi|404604335|gb|EKB03969.1| ribonucleoside-diphosphate reductase small chain [Myroides
odoratimimus CCUG 3837]
Length = 325
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/326 (63%), Positives = 257/326 (78%), Gaps = 6/326 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L N +RF +FPI++ IW+ YKK EASFWTAEE+DL QDL W L DE++F+
Sbjct: 4 QEPILTENKNRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNEDERYFI 63
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKNE 123
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+EK+RLF AIE P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKK
Sbjct: 124 EEKDRLFRAIEVFPAIMKKAEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER++ ++ +A+ IEREF+ ++
Sbjct: 183 RGLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIREILVDALNIEREFITES 242
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFV DRLL LG K Y V NPFD+M++ISLQGKTNFFEKRV
Sbjct: 243 LPVSLIGMNSTLMTQYLEFVTDRLLVELGCAKEYNVGNPFDFMDMISLQGKTNFFEKRVS 302
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQKA V+S GGN + D DF
Sbjct: 303 EYQKAGVISK--EEGGNKI-SFDADF 325
>gi|190896568|gb|ACE96797.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896580|gb|ACE96803.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 214/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGRFM EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEE+VK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEEQVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y ANPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNAANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|409124160|ref|ZP_11223555.1| ribonucleoside-diphosphate reductase small chain [Gillisia sp.
CBA3202]
Length = 325
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 254/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI++ IW+ YKK EASFWTAEE+DL QDL W L ADE++F+
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNADERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN+LF AIE P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKNQLFQAIEHFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+ + + K+ +ER+ ++ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHQNHIINKVPKERIHQILTDALTIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM++Y+EFV DRLL G K YG ANPFD+M++I+LQGKTNFFEKRVGE
Sbjct: 244 PASLIGMNAKLMTEYLEFVTDRLLVEFGCEKEYGSANPFDFMDMINLQGKTNFFEKRVGE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N + D DF
Sbjct: 304 YQKAGVM---NKDKDTDKISFDADF 325
>gi|149248382|ref|XP_001528578.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448532|gb|EDK42920.1| ribonucleoside-diphosphate reductase small chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 422
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/326 (63%), Positives = 251/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N R+ MFPI+Y +IW+MYKKAEASFWTAEE+DL +D+ W+ L +E+ F+
Sbjct: 98 DEPLLKENKRRYVMFPIRYHEIWQMYKKAEASFWTAEEIDLGKDMHDWKNKLNENERFFI 157
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ +LAFFAASDGIV ENL F EVQ+ EA++FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 158 SRILAFFAASDGIVNENLVENFSAEVQIPEAKSFYGFQIMMENIHSETYSLLIDTYIKDP 217
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AI+ +P + KKA WA+ WI D + FAERL+AFA VEG+FFSGSF +IFWLK
Sbjct: 218 KEADFLFNAIDNIPQIKKKADWAIRWINDDNALFAERLVAFAAVEGVFFSGSFASIFWLK 277
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L + + V+ ++ EAVEIE+EF DA
Sbjct: 278 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLENRPDPKIVEKIISEAVEIEKEFFTDA 337
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QY+EFVADRLL ALG K+Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 338 LPVSLLGMNCKLMCQYVEFVADRLLVALGNEKIYKVTNPFDFMENISLAGKTNFFEKRVS 397
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ N F DEDF
Sbjct: 398 DYQKAGVMAKSEDKNANE-FTFDEDF 422
>gi|190896544|gb|ACE96785.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/223 (91%), Positives = 213/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENI SEMYSLLLETYIKDS+EKNRLFHAIETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|62637405|ref|YP_227403.1| Ribonucleotide reductase small subunit [Deerpox virus W-848-83]
gi|115503265|gb|ABI99183.1| ribonucleotide reductase small subunit [Deerpox virus W-848-83]
Length = 321
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/324 (64%), Positives = 247/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL + +RF +FPI Y IW MYKKA ASFWT EEVDLS+DL W+ LT +E++F+ +
Sbjct: 2 EPLLVESNNRFVIFPIIYNDIWIMYKKAIASFWTTEEVDLSKDLLDWKKLTDNERYFIKN 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ +EAR FYGFQIAIENIHSEMYSLL++TYI D DE
Sbjct: 62 ILAFFAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN L AI+T+ C+ +KA WA WI D T+ ERL+AFA VEGIFFSG+F +IFWLKKR
Sbjct: 122 KNHLLKAIDTIDCIKEKAKWAEKWILDKESTYGERLVAFAAVEGIFFSGAFASIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L S R+ ++ EAV IE+ F+ ALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKQLLYPPSTSRIINIIVEAVSIEKSFLTKALP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN ELM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV +Y
Sbjct: 242 VKLIGMNCELMCQYIEFVADRLLSELGCNKIFKSENPFDFMESISLEGKTNFFEKRVSDY 301
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK +MS N VF +D DF
Sbjct: 302 QKMGIMSKKEDN----VFSLDADF 321
>gi|38229183|ref|NP_938276.1| 20L [Yaba monkey tumor virus]
gi|38000454|gb|AAR07377.1| 20L [Yaba monkey tumor virus]
Length = 325
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/327 (64%), Positives = 249/327 (76%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ EP+L R+ +FPI Y IW MYKKA ASFWT EEVDLS+D W L+ +EK F
Sbjct: 3 VVSEPILRQTTGRYVVFPIVYKDIWMMYKKAVASFWTVEEVDLSKDFPDWLKLSENEKKF 62
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+LAFFAASDGIV ENLA RF +EVQV+EAR FYGFQIA+ENIHSEMYSLL++TYI D
Sbjct: 63 IKHILAFFAASDGIVNENLAERFYSEVQVSEARCFYGFQIAMENIHSEMYSLLIDTYILD 122
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWL 182
S EKN LF+AIE + CV +KA WA WI+ + T+ ERLIAFA VEGIFFSGSF AIFW+
Sbjct: 123 SKEKNYLFNAIENMNCVKQKANWARKWIESKNSTYGERLIAFAAVEGIFFSGSFAAIFWI 182
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFAC+++ L E ++ +V EAV+IE+ F+ +
Sbjct: 183 KKRGLMPGLTFSNELISRDEGLHCDFACMMFKHLSNPPLENVIRDIVIEAVDIEKNFLTE 242
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
A+P L+GMN +LM QYIEFVADRLL LG K Y NPFD+ME ISL+GKTNFFEKRV
Sbjct: 243 AMPVKLIGMNCDLMKQYIEFVADRLLLELGCKKYYCSKNPFDFMENISLEGKTNFFEKRV 302
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQK SVMS N + VF +D DF
Sbjct: 303 SEYQKMSVMS----NKDDDVFSLDIDF 325
>gi|366992756|ref|XP_003676143.1| hypothetical protein NCAS_0D02000 [Naumovozyma castellii CBS 4309]
gi|342302009|emb|CCC69781.1| hypothetical protein NCAS_0D02000 [Naumovozyma castellii CBS 4309]
Length = 399
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/326 (63%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + DR +FPI+Y +IW+ YK+AEASFWTAEE+DLS+DL W + +E+ F+
Sbjct: 75 QEPLLNADEDRHTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNPNERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQV EARAFYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSAEVQVPEARAFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AIET+P + +KA WAL WI+ +E FAERL+AFA +EGIFFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIETIPQIKEKAEWALRWINDAEALFAERLVAFAAIEGIFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ K+ V+ ++ EAVEIE+ + DA
Sbjct: 255 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKVDPSTVERIIVEAVEIEKRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNEKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ N F +EDF
Sbjct: 375 DYQKAGVMAKAQDNEAG-AFAFNEDF 399
>gi|156847978|ref|XP_001646872.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
70294]
gi|156117553|gb|EDO19014.1| hypothetical protein Kpol_2002p85 [Vanderwaltozyma polyspora DSM
70294]
Length = 400
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 208/327 (63%), Positives = 251/327 (76%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL +P+R +FPIQYP I+E YK+AEASFWTAEE+DLS+DL W + +E+ F+
Sbjct: 74 EEPLLVADPNRKILFPIQYPDIYEAYKRAEASFWTAEEIDLSKDLHDWNNRMNENERFFI 133
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F E Q+ EA+ FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 134 SRVLAFFAASDGIVNENLTENFSVEAQILEAKCFYGFQIMIENIHSETYSLLIDTYIKDP 193
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AIET+P + +KA WAL WI+ SE FAERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 194 KESQYLFNAIETIPQIKEKAEWALRWINDSEALFAERLVAFAAIEGVFFSGSFASIFWLK 253
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S ++ K V+ +V EAVEIE+ + DA
Sbjct: 254 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHIKNKPDPAIVEKIVTEAVEIEKRYFTDA 313
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K++ V NPFD+ME ISL GKTNFFEKRV
Sbjct: 314 LPVALLGMNADLMNQYVEFVADRLLVAFGNEKVFKVENPFDFMENISLAGKTNFFEKRVS 373
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKASV++ S N +DEDF
Sbjct: 374 DYQKASVIAKSSNTEVETGALALDEDF 400
>gi|399033617|ref|ZP_10732239.1| ribonucleotide reductase, beta subunit [Flavobacterium sp. CF136]
gi|398068052|gb|EJL59513.1| ribonucleotide reductase, beta subunit [Flavobacterium sp. CF136]
Length = 325
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 206/325 (63%), Positives = 257/325 (79%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N +RF +FPI++ IWE YKK EASFWTAEE+DL QDL W L+ +E++F+
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLSDEERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF+A+E P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKAELFNALEVFPAIKKKAEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+S+ER+K ++ +A++IEREFV ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVSKERIKEIIVDALDIEREFVTESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LG ++YG ANPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAGLMTQYLEFVADRLLVELGCDRVYGSANPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VM N + D DF
Sbjct: 304 YQKSGVM---NTDSDAQKISFDADF 325
>gi|190896564|gb|ACE96795.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/223 (91%), Positives = 213/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHAIETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|328700093|ref|XP_001944536.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Acyrthosiphon pisum]
Length = 361
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/305 (67%), Positives = 238/305 (78%), Gaps = 1/305 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPI Y IW MYKK EASFW EEV+L DL W LT DE+HF++H
Sbjct: 39 EPLLKDNPRRFVIFPIIYDDIWAMYKKQEASFWNVEEVNLKSDLEDWMKLTDDERHFISH 98
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSEMYSLL++TYI+D E
Sbjct: 99 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIMMENIHSEMYSLLIDTYIQDPKE 158
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF+AIET+PCV KKA WAL WI D TF ERL+AFA VEGIFFSGSF A+FWLKKR
Sbjct: 159 KDFLFNAIETMPCVKKKADWALKWISDSKATFGERLVAFAAVEGIFFSGSFAALFWLKKR 218
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACLL+ L K + + ++ EAV IE++F+ +ALP
Sbjct: 219 GLMPGLTFSNELISRDEGLHTDFACLLFKHLEQKPPQAVITHIICEAVTIEQDFLTNALP 278
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+VGM+ E M+ YIEFVADRLL LG +Y +NPF +M+LIS QGKTNFFEKRVG+Y
Sbjct: 279 VRMVGMSCEKMAVYIEFVADRLLNELGCPTVYRSSNPFPFMDLISQQGKTNFFEKRVGDY 338
Query: 306 QKASV 310
QKASV
Sbjct: 339 QKASV 343
>gi|422294918|gb|EKU22218.1| ribonucleoside-diphosphate reductase subunit M2 [Nannochloropsis
gaditana CCMP526]
Length = 297
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/301 (69%), Positives = 243/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYK+AEASFWTAEE+DL+ D WE LT +E+HFV+HVLAFFAASDGIV ENLA F E
Sbjct: 1 MYKQAEASFWTAEELDLAHDKTDWEKLTDNERHFVSHVLAFFAASDGIVNENLALNFSNE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
+Q+ EAR FYGFQIAIENIHSE+YSLL++TYIK+ EK++L +AIETVPCV +KA WAL
Sbjct: 61 IQLPEARCFYGFQIAIENIHSEVYSLLIDTYIKNPSEKHKLLNAIETVPCVRRKARWALR 120
Query: 150 WIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
W D +FAERLIAFA VEGIFFSGSFC+IFWLKKRGLMPGL FSNELISRDEGLHCDF
Sbjct: 121 WCDRKYASFAERLIAFAAVEGIFFSGSFCSIFWLKKRGLMPGLAFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACLLY+ + K EERVKA++++AV IE++F+ DALP L+GMN LM +YIEF ADRLL
Sbjct: 181 ACLLYTKCKIKCPEERVKAIIQDAVAIEKQFITDALPVELIGMNSRLMCEYIEFCADRLL 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
ALG K Y NPFDWM+LISLQGKTNFFEKRVGEY K+ V GN + VF ++ D
Sbjct: 241 LALGCEKAYHSRNPFDWMDLISLQGKTNFFEKRVGEYAKSGV----GGNIEDQVFSLEVD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|190896536|gb|ACE96781.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896560|gb|ACE96793.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896566|gb|ACE96796.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 213/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENI SEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|313213932|emb|CBY40745.1| unnamed protein product [Oikopleura dioica]
Length = 418
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/325 (62%), Positives = 250/325 (76%), Gaps = 2/325 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL N RF +FPIQY IW MYKKA ASFWT EEVDL +D+ W+ L +E+ F+ H
Sbjct: 94 EPLLKENNQRFVIFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKKLKKEEQFFIKH 153
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RFM+E+Q+ EAR+FYGFQI +ENIHSEMY+ L+E + D+ E
Sbjct: 154 VLAFFAASDGIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKLIENLVHDTKE 213
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF+AIET+P + KKA WAL WI ++ R+IAFA VEGIFFSGSF AIFWLKKRG
Sbjct: 214 KMGLFNAIETMPAIKKKADWALKWIGADAPYSVRVIAFAAVEGIFFSGSFAAIFWLKKRG 273
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPG+TFSNELISRDEGLH DFACL+Y + K S+E++ A++++AV IE+EF+ DALP
Sbjct: 274 LMPGVTFSNELISRDEGLHTDFACLMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPV 333
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +LM YIEFVADRLL L K+Y V NPFD+ME+ISL+GKTNFFEK+V EY
Sbjct: 334 RLIGMNCDLMKTYIEFVADRLLVELDCPKIYKVENPFDFMEMISLEGKTNFFEKKVSEYA 393
Query: 307 KASVMSSLNGNGGN--HVFKIDEDF 329
+A VM+ L+ + + + F +D DF
Sbjct: 394 RAGVMAHLDADPDSVENQFSLDCDF 418
>gi|190896512|gb|ACE96769.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896530|gb|ACE96778.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 213/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFDWMELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDWMELISLQGKTNFFEKRVGEY 223
>gi|395802146|ref|ZP_10481399.1| ribonucleoside-diphosphate reductase [Flavobacterium sp. F52]
gi|395435387|gb|EJG01328.1| ribonucleoside-diphosphate reductase [Flavobacterium sp. F52]
Length = 325
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 255/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N +RF +FPI++ IWE YKK EASFWTAEE+DL QDL W L DE++F+
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF+A+E P +AKK WAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKTELFNALEVFPAIAKKGEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER+K ++ +A++IER+F+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIKEIIVDALDIERQFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LG ++YG ANPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNATLMTQYLEFVADRLLIELGCERVYGSANPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VM N + D DF
Sbjct: 304 YQKSGVM---NNDSDAQKISFDADF 325
>gi|194319980|pdb|2VUX|A Chain A, Human Ribonucleotide Reductase, Subunit M2 B
gi|194319981|pdb|2VUX|B Chain B, Human Ribonucleotide Reductase, Subunit M2 B
Length = 326
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/292 (69%), Positives = 239/292 (81%), Gaps = 1/292 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 35 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 94
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 95 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 154
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 155 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 214
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 215 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 274
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTN
Sbjct: 275 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTN 326
>gi|313235850|emb|CBY19835.1| unnamed protein product [Oikopleura dioica]
Length = 382
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/325 (62%), Positives = 250/325 (76%), Gaps = 2/325 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL N RF +FPIQY IW MYKKA ASFWT EEVDL +D+ W+ L +E+ F+ H
Sbjct: 58 EPLLKENNQRFVIFPIQYHDIWRMYKKAVASFWTTEEVDLGRDMDDWKKLKKEEQFFIKH 117
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RFM+E+Q+ EAR+FYGFQI +ENIHSEMY+ L+E + D+ E
Sbjct: 118 VLAFFAASDGIVNENLVDRFMSEIQIPEARSFYGFQIMMENIHSEMYAKLIENLVHDTKE 177
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF+AIET+P + KKA WAL WI ++ R+IAFA VEGIFFSGSF AIFWLKKRG
Sbjct: 178 KMGLFNAIETMPAIKKKADWALKWIGADAPYSVRVIAFAAVEGIFFSGSFAAIFWLKKRG 237
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPG+TFSNELISRDEGLH DFACL+Y + K S+E++ A++++AV IE+EF+ DALP
Sbjct: 238 LMPGVTFSNELISRDEGLHTDFACLMYKHMVQKPSQEQIIAIIRDAVSIEQEFLTDALPV 297
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN +LM YIEFVADRLL L K+Y V NPFD+ME+ISL+GKTNFFEK+V EY
Sbjct: 298 RLIGMNCDLMKTYIEFVADRLLVELDCPKIYKVENPFDFMEMISLEGKTNFFEKKVSEYA 357
Query: 307 KASVMSSLNGNGGN--HVFKIDEDF 329
+A VM+ L+ + + + F +D DF
Sbjct: 358 RAGVMAHLDADPDSVENQFSLDCDF 382
>gi|386819559|ref|ZP_10106775.1| ribonucleotide reductase, beta subunit [Joostella marina DSM 19592]
gi|386424665|gb|EIJ38495.1| ribonucleotide reductase, beta subunit [Joostella marina DSM 19592]
Length = 326
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 201/308 (65%), Positives = 248/308 (80%), Gaps = 3/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPIQ+ IWE YKK EA FWTAEE+DL QDL W L DE++F+
Sbjct: 6 EPILQENKDRFVIFPIQHHDIWEWYKKQEACFWTAEEIDLHQDLTDWNNKLNDDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 66 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKNEK 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF AIE P + KKA WAL WI+ S +FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKGQLFKAIENFPAIKKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L+ K+S+ER+K ++ EA++IEREF+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDFAVHLHNTHLKNKVSKERIKEIIVEALDIEREFITESL 244
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL + K+Y NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PASLIGMNAKLMTQYLEFVTDRLLVEMECEKIYNSTNPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMS 312
YQKA V+S
Sbjct: 305 YQKAGVLS 312
>gi|150024561|ref|YP_001295387.1| ribonucleoside-diphosphate reductase subunit beta [Flavobacterium
psychrophilum JIP02/86]
gi|149771102|emb|CAL42569.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
psychrophilum JIP02/86]
Length = 325
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 200/309 (64%), Positives = 252/309 (81%), Gaps = 3/309 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N +RF +FPI++ IWE YK EASFWTAEE+DLSQDL W L+ DE++FV
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEFYKSMEASFWTAEEIDLSQDLNDWNNKLSNDERYFVK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LF+A+E P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDELFNALEVFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER+++++ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIRSIIVDALNIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LG + Y ANPFD+M++ISLQGKTNFFEK+V E
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLVELGCDREYNTANPFDFMDMISLQGKTNFFEKKVAE 303
Query: 305 YQKASVMSS 313
YQKA VM++
Sbjct: 304 YQKAGVMNT 312
>gi|336171888|ref|YP_004579026.1| ribonucleoside-diphosphate reductase [Lacinutrix sp. 5H-3-7-4]
gi|334726460|gb|AEH00598.1| Ribonucleoside-diphosphate reductase [Lacinutrix sp. 5H-3-7-4]
Length = 327
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/308 (66%), Positives = 249/308 (80%), Gaps = 3/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L N DRF +FPIQ+ +WE YKK+EAS WTAEE+DL QDL W + LT DE++F+
Sbjct: 6 EPILQENKDRFVIFPIQHHDLWEWYKKSEASMWTAEEIDLHQDLTDWSSKLTDDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 66 HVLAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF+AIET P + KKA WAL WI+ S +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKAMLFNAIETFPAIKKKAEWALKWIE-SPSFAERLIAFAAVEGIFFSGSFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+ L K+ +ER++ ++ +A+ IEREF+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDFAVHLHEHHLINKVPKERIREILVDALNIEREFITESL 244
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LMSQY+EFV D LL LG K YG ANPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PVSLIGMNSKLMSQYLEFVTDGLLQDLGCEKEYGTANPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMS 312
YQKA V++
Sbjct: 305 YQKAGVLN 312
>gi|341889599|gb|EGT45534.1| hypothetical protein CAEBREN_21681 [Caenorhabditis brenneri]
Length = 375
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 203/308 (65%), Positives = 246/308 (79%), Gaps = 1/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL +RF +FP++Y +IW+ YKKA ASFWT EEVDL +D+ WE + DE++F++
Sbjct: 56 EPLLQDLDNRFVIFPLRYHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISR 115
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EV+V+EAR FYGFQIAIENIHSEMYS L+ETYI+D E
Sbjct: 116 VLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEQE 175
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+++LF+AI + KKA WAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKKR
Sbjct: 176 RHKLFNAIFEFEFIKKKADWALKWISDQKASFAERLIAFAAVEGIFFSGSFASIFWLKKR 235
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLYS+L+ KL++ER+ ++ +AV+IE+EF+ +ALP
Sbjct: 236 GLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLTQERIYEIISDAVKIEQEFLTEALP 295
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LMSQYIEFVAD LL LG KL+ V NPFD+ME IS+ GKTNFFEKRV EY
Sbjct: 296 VDMIGMNCRLMSQYIEFVADHLLAELGCDKLFKVKNPFDFMENISIDGKTNFFEKRVSEY 355
Query: 306 QKASVMSS 313
Q+ VMS+
Sbjct: 356 QRPGVMST 363
>gi|146298285|ref|YP_001192876.1| ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
UW101]
gi|146152703|gb|ABQ03557.1| Ribonucleoside-diphosphate reductase [Flavobacterium johnsoniae
UW101]
Length = 325
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 255/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N +RF +FPI++ IWE YKK EASFWTAEE+DL QDL W L DE++F+
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDLTDWNNKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF+A+E P +AKK WAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKTELFNALEVFPAIAKKGEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER+K ++ +A++IER+FV ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLVNKVPKERIKEIIVDALDIERQFVTESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LG ++YG ANPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAGLMTQYLEFVADRLLVELGCERVYGSANPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VM N + D DF
Sbjct: 304 YQKSGVM---NTDSDAQKISFDADF 325
>gi|190896538|gb|ACE96782.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896548|gb|ACE96787.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896558|gb|ACE96792.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 213/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|125554800|gb|EAZ00406.1| hypothetical protein OsI_22421 [Oryza sativa Indica Group]
Length = 244
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/244 (83%), Positives = 219/244 (89%), Gaps = 1/244 (0%)
Query: 87 MTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATW 146
M++VQVAEARAFYGFQIAIENIHSEMYSLLLETYI+D EK+RLF AI+TVP V +KA W
Sbjct: 1 MSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDGAEKDRLFRAIDTVPAVRRKADW 60
Query: 147 ALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC 206
A+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC
Sbjct: 61 AMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC 120
Query: 207 DFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADR 266
DFACLLY LLR KL E RV+ +V +AV+IEREFVCDALP ALVGMNG+LMSQYIEFVADR
Sbjct: 121 DFACLLYDLLRGKLDEARVREIVADAVDIEREFVCDALPVALVGMNGDLMSQYIEFVADR 180
Query: 267 LLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNG-GNHVFKI 325
LL ALG K+Y VANPFDWMELISLQGKTNFFEKRVG+YQKASVMSSLNG NHVF I
Sbjct: 181 LLMALGCKKMYNVANPFDWMELISLQGKTNFFEKRVGDYQKASVMSSLNGGASANHVFSI 240
Query: 326 DEDF 329
DEDF
Sbjct: 241 DEDF 244
>gi|347535523|ref|YP_004842948.1| ribonucleoside-diphosphate reductase subunit beta [Flavobacterium
branchiophilum FL-15]
gi|345528681|emb|CCB68711.1| Ribonucleoside-diphosphate reductase, beta subunit [Flavobacterium
branchiophilum FL-15]
Length = 325
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/309 (64%), Positives = 249/309 (80%), Gaps = 3/309 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N +RF +FPI++ IW MYK EASFWTAEE+DLSQDL W L +E++F+
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWNMYKSMEASFWTAEEIDLSQDLTDWNFKLNNEERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEI 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LFHA++ P + KKA WAL WI S++FAERLIAFA VEGIFFSG+FCAI+WLKKR
Sbjct: 125 EKDELFHALDVFPAIKKKADWALKWI-TSDSFAERLIAFAAVEGIFFSGAFCAIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLT+SNELISRDEG+HCDFA L+ + L K+S++R+ ++ A++IEREF+ ++L
Sbjct: 184 GLMPGLTYSNELISRDEGVHCDFAVHLHNNHLVNKVSKQRITEIITNALDIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LG ++Y NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAALMTQYLEFVADRLLVELGCDRVYHTTNPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSS 313
YQKA VM++
Sbjct: 304 YQKAGVMNT 312
>gi|19113338|ref|NP_596546.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
pombe 972h-]
gi|9297110|sp|P36603.2|RIR2_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|3378511|emb|CAA20100.1| ribonucleotide reductase small subunit Suc22 [Schizosaccharomyces
pombe]
Length = 391
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 253/327 (77%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+E +L PNP RF +FPI+Y +IW+ YKKAEASFWTAEE+DLS+DL W+ L ADE++F+
Sbjct: 65 DEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFI 124
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLA+FAASDGIV ENL RF +EVQ+ EAR YGFQI IENIHSE YSLLL+TYI++
Sbjct: 125 STVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREP 184
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F AI T+ + KA WAL WI D T+A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 185 KEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLK 244
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACL++S L+ + + V+A++ EAV+IE+E+ DA
Sbjct: 245 KRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIEKEYFTDA 304
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K Y V NPFD+ME ISL GKTNFFEK+V
Sbjct: 305 LPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVS 364
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQ A VMS + +H F IDEDF
Sbjct: 365 DYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>gi|126662515|ref|ZP_01733514.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
bacterium BAL38]
gi|126625894|gb|EAZ96583.1| ribonucleoside-diphosphate reductase 1, beta subunit [Flavobacteria
bacterium BAL38]
Length = 325
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 253/325 (77%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI++ IWE YKK EA WTAEE+DL DL W L DEK+F+
Sbjct: 5 EPILQENKDRFVIFPIKHQDIWEWYKKQEACIWTAEEIDLHTDLNDWNNKLNDDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN+LFHAIET P + +KA WAL WI+ S++FAERLIAFA VEGIFFSGSFC+I+WLKKR
Sbjct: 125 EKNKLFHAIETFPAIKEKAQWALKWIE-SDSFAERLIAFAAVEGIFFSGSFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L+S + K+ +ER+ ++ +A+ IER+F+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHSHHIVNKVPKERITEIIVDALNIERQFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL LG ++Y +NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNATLMTQYLEFVTDRLLVELGCDRVYNSSNPFDFMDMISLQGKTNFFEKRVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM+S + +G D DF
Sbjct: 304 YQKAGVMNSDSESGK---ISFDADF 325
>gi|86134368|ref|ZP_01052950.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
MED152]
gi|85821231|gb|EAQ42378.1| ribonucleoside-diphosphate reductase small chain [Polaribacter sp.
MED152]
Length = 323
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/326 (62%), Positives = 255/326 (78%), Gaps = 8/326 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
+EP+L PN +RF +FPIQ+ +WE YKK +A FWTAEE+DL DL W LT DE++F+
Sbjct: 4 QEPILQPNDNRFVIFPIQHNDLWEWYKKQQACFWTAEEIDLHSDLVDWTTKLTDDERYFI 63
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDE 123
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK+RLF AIE P + KKA WAL WI+ SE+FAERLIAFA VEGIFFSG+FC+IFWLKK
Sbjct: 124 VEKDRLFRAIEVFPAIKKKADWALKWIE-SESFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDA 243
RGL+PGLTFSNELISRDEG+HCDFA L+ + + ++ ++R+K ++ +A++IEREFV ++
Sbjct: 183 RGLLPGLTFSNELISRDEGMHCDFAVHLHNNHIVNRVPKDRIKEIIVDALDIEREFVTES 242
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM+QY+EFV DRLL G K+Y V NPFD+ME+ISL+GKTNFFEKRV
Sbjct: 243 LPVSLIGMNAKLMTQYLEFVTDRLLLEFGCEKVYDVTNPFDFMEMISLEGKTNFFEKRVS 302
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQKA V S GG D DF
Sbjct: 303 EYQKAGVKS-----GGTGSISFDSDF 323
>gi|381187133|ref|ZP_09894698.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Flavobacterium frigoris PS1]
gi|379650743|gb|EIA09313.1| ribonucleotide reductase of class Ia (aerobic), beta subunit
[Flavobacterium frigoris PS1]
Length = 325
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/325 (62%), Positives = 254/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N +RF +FPI++ IWE YK EASFWTAEE+DLSQDL W L DE++FV
Sbjct: 5 EPILQENKNRFVIFPIKHHDIWEFYKSMEASFWTAEEIDLSQDLNDWNNKLNDDERYFVK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDDA 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF+A+E P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+I+WLKKR
Sbjct: 125 EKDQLFNALEVFPAIKKKADWALQWIE-SDSFAERLIAFAAVEGIFFSGAFCSIYWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER++ ++ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIRGIIVDALNIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFVADRLL LG + Y NPFD+M++ISLQGKTNFFEK+V E
Sbjct: 244 PVSLIGMNAVLMTQYLEFVADRLLVELGCDREYNTTNPFDFMDMISLQGKTNFFEKKVAE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ VM N +G D DF
Sbjct: 304 YQKSGVM---NTDGDAQKISFDADF 325
>gi|365984697|ref|XP_003669181.1| hypothetical protein NDAI_0C02780 [Naumovozyma dairenensis CBS 421]
gi|343767949|emb|CCD23938.1| hypothetical protein NDAI_0C02780 [Naumovozyma dairenensis CBS 421]
Length = 399
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/326 (63%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + DR +FPI+Y +IW+ YK+AEASFWTAEE+DLS+DL W + A+E+ F+
Sbjct: 75 EEPLLTYDNDRHTLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNANERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQ+ EARAFYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSAEVQIPEARAFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AIET+P + +KA WAL WI+ SE+ F ERL+AFA +EGIFFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIETIPQIKEKAEWALRWINDSESPFGERLVAFAAIEGIFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ K+ V+ ++ +AVEIE+ + DA
Sbjct: 255 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKIEPSTVETIIVQAVEIEKRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNEKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA V++ F I EDF
Sbjct: 375 DYQKAGVIAKATETETG-AFVISEDF 399
>gi|322510876|gb|ADX06189.1| putative ribonucleotide reductase small subunit [Organic Lake
phycodnavirus 2]
Length = 324
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 194/309 (62%), Positives = 242/309 (78%), Gaps = 1/309 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M EPLL + +RF MFP+ IW+MYKK FW EE+D S+D+ HW L DE
Sbjct: 1 MSKKNTEPLLTEDDNRFVMFPVSDETIWKMYKKQVDCFWRPEEIDTSKDMTHWNKLNTDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++F+ +LAFFA+SDGIVLENL RFM EVQ++EARAFYGFQIA+ENIHSE YSLL+++Y
Sbjct: 61 QYFIKMILAFFASSDGIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKDSDEK++LFH++E PC+ KK WA+ WI D +FA RL+AFACVEGIFFSG+FC+I
Sbjct: 121 IKDSDEKHKLFHSLEHFPCIKKKGDWAMKWIQDKKSSFATRLVAFACVEGIFFSGAFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
+WLKKRGLMPGLTFSNELISRDE LH +FA LY+ L KL++++V+ +++EAV IE+EF
Sbjct: 181 YWLKKRGLMPGLTFSNELISRDEALHTEFAVYLYNRLEKKLNKKKVREIIEEAVTIEKEF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ DALPC ++GMN ELM+QYIEFVADRL+ LG +Y NPFD+MELISL+ KTNFFE
Sbjct: 241 IVDALPCRMIGMNSELMTQYIEFVADRLMMQLGCDVIYATNNPFDFMELISLEQKTNFFE 300
Query: 300 KRVGEYQKA 308
RV EY A
Sbjct: 301 SRVSEYSLA 309
>gi|324519017|gb|ADY47264.1| Ribonucleoside-diphosphate reductase small chain, partial [Ascaris
suum]
Length = 376
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/308 (65%), Positives = 245/308 (79%), Gaps = 1/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLLA NP+RF +FPI+Y IW+ YK+A ASFWT EEVDLS+D +HWE L+ E+ F++
Sbjct: 57 EPLLANNPNRFVIFPIKYHDIWDFYKRAVASFWTVEEVDLSKDYQHWENLSDGERFFISR 116
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSEMYS ++ETYI+D +E
Sbjct: 117 VLAFFAASDGIVNENLVERFAQEVQVPEARFFYGFQIMIENIHSEMYSKMVETYIRDDNE 176
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ +LF+AI + KKA WAL WI D +AERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 177 RKKLFNAINEFEFIKKKADWALKWIADKQAPYAERLIAFAAVEGIFFSGSFAAIFWLKKR 236
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACL++S L+ K ++ER+ +++EAV+IE+E++ +ALP
Sbjct: 237 GLMPGLTHSNELISRDEGLHRDFACLMFSHLKKKPNKERIYEIIREAVKIEQEYLTEALP 296
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN ELMSQYIE+VAD LL L KLY + NPFD+M IS++ KTNFFEKRV EY
Sbjct: 297 VGLIGMNCELMSQYIEYVADHLLTELKCPKLYNMENPFDFMARISIEAKTNFFEKRVSEY 356
Query: 306 QKASVMSS 313
QKA V+S+
Sbjct: 357 QKAGVLST 364
>gi|211956300|ref|YP_002302368.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
gi|115503095|gb|ABI99013.1| ribonucleotide reductase small subunit [Deerpox virus W-1170-84]
Length = 321
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/324 (64%), Positives = 247/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL + +RF +FPI Y IW MYKKA ASFWT EEVDLS+DL W+ LT +E++F+ +
Sbjct: 2 EPLLVESNNRFVIFPIVYNDIWIMYKKAVASFWTTEEVDLSKDLLDWKKLTDNERYFIKN 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ +EAR FYGFQIAIENIHSEMYSLL++TYI D DE
Sbjct: 62 ILAFFAASDGIVNENLAQRFYSEVQCSEARCFYGFQIAIENIHSEMYSLLIDTYITDVDE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN L AI+T+ CV +KA WA WI D ++ ERL+AFA VEGIFFSG+F +IFWLKKR
Sbjct: 122 KNHLLKAIDTIDCVKEKAKWAEKWILDKESSYGERLVAFAAVEGIFFSGAFASIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L + R+ ++ EAV IE+ F+ ALP
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLMFKQLLHPPNPSRIINIIVEAVSIEKSFLTTALP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN ELM QYIEFVADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV +Y
Sbjct: 242 VKLIGMNCELMCQYIEFVADRLLSELGCTKIFKSENPFDFMESISLEGKTNFFEKRVSDY 301
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK +MS N VF +D DF
Sbjct: 302 QKMGIMSKKEDN----VFSLDVDF 321
>gi|190896552|gb|ACE96789.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 212/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EV V+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHAIETVPCVAK
Sbjct: 1 AGRLMKEVHVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|148676854|gb|EDL08801.1| ribonucleotide reductase M2 B (TP53 inducible) [Mus musculus]
Length = 297
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/301 (67%), Positives = 243/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++H+LAFFAASDGIV ENL RF E
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQV EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL++ L K SE+RV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLL 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
G LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D D
Sbjct: 241 GELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|45184688|ref|NP_982406.1| AAL136Cp [Ashbya gossypii ATCC 10895]
gi|44980034|gb|AAS50230.1| AAL136Cp [Ashbya gossypii ATCC 10895]
gi|374105604|gb|AEY94515.1| FAAL136Cp [Ashbya gossypii FDAG1]
Length = 422
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/326 (63%), Positives = 248/326 (76%), Gaps = 3/326 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL N RF +FPI+Y IW+ YK+AEASFWTAEE+DLS+D+ W +T +E+ F++
Sbjct: 97 EPLLMENKRRFVLFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMTENERFFIS 156
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 157 RVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDPK 216
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AIET+P + +KA WA+ WI D FAERL+AFA VEGIFFSGSF AIFWLKK
Sbjct: 217 EADHLFNAIETIPEIKEKAEWAIRWIQDKDALFAERLVAFAAVEGIFFSGSFAAIFWLKK 276
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
+GLMPGLTFSNELI RDEGLH DFACLL++ L K E V+ ++ EAVEIE+ + DA+
Sbjct: 277 KGLMPGLTFSNELICRDEGLHTDFACLLFAHLNNKPDTEIVEKIITEAVEIEKRYFQDAI 336
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN LM+QY+EFVADRLL ALG K Y V+NPFD+ME ISL GKTNFFEKRV +
Sbjct: 337 PVALLGMNSSLMNQYVEFVADRLLVALGNKKYYNVSNPFDFMENISLAGKTNFFEKRVSD 396
Query: 305 YQKASVMS-SLNGNGGNHVFKIDEDF 329
YQKA VM+ S + F DEDF
Sbjct: 397 YQKAGVMAKSTKQESESGAFTFDEDF 422
>gi|260061082|ref|YP_003194162.1| ribonucleoside-diphosphate reductase small chain [Robiginitalea
biformata HTCC2501]
gi|88785214|gb|EAR16383.1| probable ribonucleoside-diphosphate reductase small chain
[Robiginitalea biformata HTCC2501]
Length = 328
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/329 (62%), Positives = 251/329 (76%), Gaps = 4/329 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEK 61
S EEP+L N DRF +FPIQ+ +WE YKK EA FWTAEE+DL QDL W L+ DEK
Sbjct: 2 SAAEEPILKENKDRFVIFPIQHHDLWEWYKKCEACFWTAEEIDLHQDLSDWNNKLSDDEK 61
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F+ H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+
Sbjct: 62 YFIKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYV 121
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
KD EKN LF AIE P + KKA WAL WI+ S +FAERLIAFA VEGIFFSG+FC+IFW
Sbjct: 122 KDEKEKNVLFQAIENFPAIKKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFW 180
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFV 240
LKKRGLMPGLTFSNELISRDEG+HCD+A L+ + L K+ +ER+ ++ A++IEREF+
Sbjct: 181 LKKRGLMPGLTFSNELISRDEGMHCDYAVHLHNNHLVNKVPKERITQIITNALDIEREFI 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
++LP +L+GMN +LM+QY+EFV DRLL L K+Y NPFD+M++ISLQGKTNFFEK
Sbjct: 241 TESLPVSLIGMNAKLMTQYLEFVTDRLLVELECEKVYNSTNPFDFMDMISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RV EYQKA VM+ + D DF
Sbjct: 301 RVSEYQKAGVMNKEKDTDSQKI-SFDADF 328
>gi|213402763|ref|XP_002172154.1| ribonucleoside-diphosphate reductase small chain
[Schizosaccharomyces japonicus yFS275]
gi|212000201|gb|EEB05861.1| ribonucleoside-diphosphate reductase small chain
[Schizosaccharomyces japonicus yFS275]
Length = 392
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/326 (63%), Positives = 253/326 (77%), Gaps = 2/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+E +L PNP RF MFPI+Y IW+ YKKAEASFWTAEE+DLS+DL W+ L DE++F+
Sbjct: 67 DEVVLTPNPRRFVMFPIEYHDIWQFYKKAEASFWTAEEIDLSKDLHDWDNKLNKDERYFI 126
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLA+FAASDGIV ENL RF +EVQ+AEAR YGFQI IENIHSE YSLLL+TYI+D
Sbjct: 127 STVLAYFAASDGIVNENLLSRFSSEVQIAEARCVYGFQIMIENIHSETYSLLLDTYIRDP 186
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F AI T+ + KA WAL WI+ E+ +A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 187 YEKQRHFDAILTMGSIKAKAKWALRWIEDPESIYAVRLVAFAAVEGIFFSGSFASIFWLK 246
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEG+H DFACL++S L+ + ++ V+ ++ EAV IE+E+ DA
Sbjct: 247 KRGLMPGLTFSNELICRDEGVHTDFACLMFSHLKHRPGKKVVERIIIEAVNIEKEYFTDA 306
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN +LM QYIEFVADRLL +LG K Y V NPFD+ME ISL GKTNFFEK+V
Sbjct: 307 LPVYLLGMNCDLMCQYIEFVADRLLLSLGNEKYYNVTNPFDFMENISLAGKTNFFEKKVS 366
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ A VM++ N + H+F ++EDF
Sbjct: 367 DYQIAGVMAAQNKDNDEHMFTVNEDF 392
>gi|190896516|gb|ACE96771.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 212/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENI SEMYSLLLETYIKDS+EKNRLFHAIETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|18640102|ref|NP_570176.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
gi|18448509|gb|AAL69755.1| SPV016 ribonucleotide reductase, small subunit [Swinepox virus]
Length = 320
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 251/323 (77%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L + RF +FPI+Y IW+MYK++ ASFWT EEVDLS+DL W+ LT DEK+F+ H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA+SDGIV ENLA RF +VQ +EAR FYGFQIA+ENIHSEMYSLL++TY++D+ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF+AIET+ CV KKA WA WI ++ + ER++AFA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L S+E + +++ +AV IE+EF+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ V NPF +ME ISL+GKTNFFE+RV EYQ
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEKVFNVYNPFSFMEYISLEGKTNFFERRVSEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K V + N ++F D DF
Sbjct: 302 KMGVFT----NKEENIFSTDIDF 320
>gi|375013326|ref|YP_004990314.1| ribonucleotide reductase subunit beta [Owenweeksia hongkongensis
DSM 17368]
gi|359349250|gb|AEV33669.1| ribonucleotide reductase, beta subunit [Owenweeksia hongkongensis
DSM 17368]
Length = 324
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 200/309 (64%), Positives = 250/309 (80%), Gaps = 3/309 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L N +R+ +FPI++ IWE YKK EASFWTAEE+DL QDL WE L DE++F+
Sbjct: 4 QEPILQENKNRYVLFPIEHHDIWEWYKKQEASFWTAEEIDLHQDLTDWENKLNDDERYFI 63
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVLAFFAASDGIV ENLA F+ EVQ EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 64 KHVLAFFAASDGIVNENLAENFVNEVQYTEAKFFYGFQIMMENIHSETYSLLIDTYIKDK 123
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++NRLF A+E P + KKA WA+ WI+ S++FAERLIAFA VEGIFFSGSFC+IFWLKK
Sbjct: 124 EDRNRLFTALENFPAIKKKADWAIKWIE-SDSFAERLIAFAAVEGIFFSGSFCSIFWLKK 182
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEGLHCDFA L++ L K+ +ER++ ++ EA++IEREF+ ++
Sbjct: 183 RGLMPGLTFSNELISRDEGLHCDFAVHLHNKHLINKVPKERIRQILMEALDIEREFITES 242
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN +LM++Y+EFV DRLL L K Y V+NPFD+M++ISLQGKTNFFEKRV
Sbjct: 243 LPVNLIGMNSKLMTEYLEFVTDRLLVELECEKEYNVSNPFDFMDMISLQGKTNFFEKRVA 302
Query: 304 EYQKASVMS 312
EYQK+ V+
Sbjct: 303 EYQKSGVVQ 311
>gi|190896520|gb|ACE96773.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/223 (91%), Positives = 212/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHAIETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAIETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|388857936|emb|CCF48381.1| probable small subunit of ribonucleotide reductase [Ustilago
hordei]
Length = 421
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/322 (63%), Positives = 247/322 (76%), Gaps = 8/322 (2%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
RF +FPI++ +IW+MYKKAEASFWTAEE+DLS+DL W+ L +E+HF++HVLAFFAAS
Sbjct: 100 RFVLFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAAS 159
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
DGIV ENL RF +EVQ AEAR FYGFQI +ENIHSE YSLL++TYI++ +++ LF A+
Sbjct: 160 DGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREFLFDAV 219
Query: 135 ETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
ET+P V KKA WAL WI D TFAERL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTF
Sbjct: 220 ETIPVVKKKAEWALRWINDRKATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 279
Query: 194 SNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
SNELISRDEGLH DFACLL+S L+ + + V ++ EAVEIE EF+ ++PCA++GMN
Sbjct: 280 SNELISRDEGLHTDFACLLFSHLKKRAHPDTVLKIISEAVEIEIEFLTQSIPCAMIGMNQ 339
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSS 313
LMSQYI FVADRLL LG +G NPFD+M+ ISLQGKTNFFEK+V EY K V
Sbjct: 340 TLMSQYITFVADRLLTQLGNPVFWGAKNPFDFMDQISLQGKTNFFEKKVAEYAKTGVARR 399
Query: 314 LNGNGGN------HVFKIDEDF 329
G+ H F ++EDF
Sbjct: 400 EGEESGDGIQKNTHSFSLEEDF 421
>gi|297449|emb|CAA46231.1| ribonucleotide reductase, small subunit [Schizosaccharomyces pombe]
gi|447147|prf||1913428B ribonucleotide reductase:SUBUNIT=small
Length = 391
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/327 (63%), Positives = 252/327 (77%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+E +L PNP RF +FPI+Y +IW+ YKKAEASFWTAEE+DLS+DL W+ L ADE++F+
Sbjct: 65 DEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFI 124
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLA+FAASDGIV ENL RF +EVQ+ EAR YGFQI IENIHSE YSLLL+TYI++
Sbjct: 125 STVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREP 184
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F AI T+ + KA WAL WI D T+A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 185 KEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLK 244
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACL++S L+ + + +K ++ EAV+IE+E+ DA
Sbjct: 245 KRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKLLKPIIVEAVDIEKEYFTDA 304
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K Y V NPFD+ME ISL GKTNFFEK+V
Sbjct: 305 LPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVS 364
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQ A VMS + +H F IDEDF
Sbjct: 365 DYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>gi|190896550|gb|ACE96788.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 212/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLAFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|268575178|ref|XP_002642568.1| C. briggsae CBR-RNR-2 protein [Caenorhabditis briggsae]
Length = 365
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/309 (66%), Positives = 245/309 (79%), Gaps = 1/309 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL +RF +FP+++ +IW+ YKKA ASFWT EEVDL +D+ WE + DE++F++
Sbjct: 45 DEPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFIS 104
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL RF EV+V+EAR FYGFQIAIENIHSEMYS L+ETYI+D
Sbjct: 105 RVLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEK 164
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ +LF+AI + KKA WAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 165 ERMKLFNAIFEFEFIKKKADWALRWISDTKASFAERLIAFAAVEGIFFSGSFASIFWLKK 224
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLT SNELISRDEGLH DFACLLYS+L+ KLS+ER+ ++++AV IE+EF+ +AL
Sbjct: 225 RGLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLSQERIFEIIRDAVAIEQEFLTEAL 284
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P ++GMN LMSQYIEFVAD LL LG KLY V NPFD+ME IS+ GKTNFFEKRV E
Sbjct: 285 PVDMIGMNCRLMSQYIEFVADHLLQELGCDKLYNVKNPFDFMENISIDGKTNFFEKRVSE 344
Query: 305 YQKASVMSS 313
YQ+ VM S
Sbjct: 345 YQRPGVMVS 353
>gi|399925484|ref|ZP_10782842.1| ribonucleoside-diphosphate reductase small chain [Myroides
injenensis M09-0166]
Length = 325
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/326 (62%), Positives = 256/326 (78%), Gaps = 6/326 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L N +RF +FPI++ IW+ YKK EASFWTAEE+DL QDL W L DE++F+
Sbjct: 4 QEPILTENKNRFVIFPIKHHDIWDWYKKMEASFWTAEEIDLHQDLSDWNNKLNEDERYFI 63
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+LAFFAASDGIV ENLA F+ EVQ EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 64 KHILAFFAASDGIVNENLAENFVNEVQYPEAKFFYGFQIMMENIHSETYSLLIDTYVKNE 123
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+EK++LF AI+ P + KKA WAL WI+ SE+FAERLIAFA VEGIFFSG+FC+IFWLKK
Sbjct: 124 EEKDKLFRAIDVFPAIKKKADWALKWIE-SESFAERLIAFAAVEGIFFSGAFCSIFWLKK 182
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER++ ++ A+ IEREF+ ++
Sbjct: 183 RGLMPGLTFSNELISRDEGVHCDFAVHLHNHHLINKVPKERIREILVNALNIEREFITES 242
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM+QY+EFV DRLL LG K Y V+NPFD+M++ISLQGKTNFFEKRV
Sbjct: 243 LPVSLIGMNAGLMTQYLEFVTDRLLVELGCEKEYNVSNPFDFMDMISLQGKTNFFEKRVS 302
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQKA V+S GGN + D DF
Sbjct: 303 EYQKAGVISK--EEGGNKI-SFDADF 325
>gi|71024571|ref|XP_762515.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
gi|46101992|gb|EAK87225.1| hypothetical protein UM06368.1 [Ustilago maydis 521]
Length = 424
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/322 (63%), Positives = 250/322 (77%), Gaps = 8/322 (2%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
RF +FPI++ +IW+MYKKAEASFWTAEE+DLS+DL W+ L +E+HF++HVLAFFAAS
Sbjct: 103 RFVLFPIRFHEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAAS 162
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
DGIV ENL RF +EVQ AEAR FYGFQI +ENIHSE YSLL++TYI++ +++ LF A+
Sbjct: 163 DGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREYLFDAV 222
Query: 135 ETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
ET+P V +KA WAL WI D TFAERL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTF
Sbjct: 223 ETIPVVKQKADWALRWISDKRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 282
Query: 194 SNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
SNELISRDEGLH DFACLL+S LR + + V ++ EAVEIE+ F+C+++P AL+GMN
Sbjct: 283 SNELISRDEGLHTDFACLLFSHLRRRAHPDTVLKIITEAVEIEKAFLCESIPVALIGMNS 342
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSS 313
+LM QYIE+VADRLL +LG YG PFD+M ISL+GKTNFFEK+V EY KA V
Sbjct: 343 KLMCQYIEYVADRLLVSLGNPVHYGSTCPFDFMTNISLEGKTNFFEKKVAEYAKAGVARK 402
Query: 314 LNGNGGN------HVFKIDEDF 329
+ G+ H F ++EDF
Sbjct: 403 DANDSGDGTQKSTHTFSLEEDF 424
>gi|403277257|ref|XP_003930289.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Saimiri boliviensis boliviensis]
Length = 668
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/329 (61%), Positives = 252/329 (76%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP F +FPI+YP IW+ YKK EASFWT +EVDLS+D+ HWE+L + +
Sbjct: 344 PRMQDEPLLRENPHHFVIFPIEYPDIWQTYKKGEASFWTTKEVDLSKDVWHWESLKPEGR 403
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAAS GIV ENL RF EVQ+ EA FYGFQ+A++NIHSE+YSLL++TYI
Sbjct: 404 YFISHVLAFFAASYGIVNENLVERFSQEVQITEAHCFYGFQMAMKNIHSEIYSLLIDTYI 463
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD +E+ LF+AIET+PCV KKA WAL W+ D T+ E + AFA VEGIFFSGSF +IF
Sbjct: 464 KDPNEREFLFNAIETMPCVKKKADWALLWVGDKEATYGEHVAAFAAVEGIFFSGSFASIF 523
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNEL RDEGLHCDFACL++ K SEERV+ ++ AV +E+EF+
Sbjct: 524 WLKKRGLMPGLTFSNELTGRDEGLHCDFACLMFKHQVHKPSEERVREIIISAVRMEQEFL 583
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ +++ V NPFD+ME ISL+G TNFFEK
Sbjct: 584 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSRVFRVENPFDFMENISLEGNTNFFEK 643
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVG+YQ+ VMSS N F + DF
Sbjct: 644 RVGKYQRMGVMSSPTENS----FTLGADF 668
>gi|190896532|gb|ACE96779.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896554|gb|ACE96790.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 212/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENI SEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|374288410|ref|YP_005035495.1| putative ribonucleoside-diphosphate reductase small chain subunit
[Bacteriovorax marinus SJ]
gi|301166951|emb|CBW26530.1| putative ribonucleoside-diphosphate reductase small chain subunit
[Bacteriovorax marinus SJ]
Length = 322
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 196/325 (60%), Positives = 247/325 (76%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
+P+LAPN DRF +FP++Y I+EMYK A FWTA+E+D + D+ WE L DE+HF+ H
Sbjct: 2 DPILAPNDDRFVLFPLKYHSIFEMYKNHMAVFWTADELDFASDITDWEKLNKDEQHFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +VQ+ EAR FYGFQIA+ENIHSE YSLL++TY+KD E
Sbjct: 62 ILAFFAASDGIVNENLALRFYNDVQIPEARCFYGFQIAMENIHSETYSLLIDTYVKDPKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K+ LFHA+ P V KKA WA+ W+ +FAERLIAFA +EGIFFSGSFC+I+WLKKRG
Sbjct: 122 KDELFHAVTHFPFVEKKADWAMKWMQSKRSFAERLIAFAAIEGIFFSGSFCSIYWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLL--RTKLSEERVKALVKEAVEIEREFVCDAL 244
LMPGL SNE ISRDEGLHC+FAC ++ LL +L++E + ++ EAV IE+EF+ +A+
Sbjct: 182 LMPGLCTSNEFISRDEGLHCEFACHIHELLTPEEQLNKETITQIITEAVSIEKEFITEAI 241
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN ++MS+YIEFVAD L LG K Y NPFDWMELISL+GKTNFFEKRV E
Sbjct: 242 PVSLIGMNADMMSRYIEFVADYWLNRLGCEKAYNTENPFDWMELISLEGKTNFFEKRVSE 301
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK V+ G+ + F +D +F
Sbjct: 302 YQKPGVL----GDRAQNTFTLDAEF 322
>gi|402878877|ref|XP_003903090.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Papio anubis]
Length = 297
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/301 (68%), Positives = 242/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++H+LAFFAASDGIV ENL RF E
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQV EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL++ L K SEERV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D D
Sbjct: 241 VELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|209877302|ref|XP_002140093.1| ribonucleotide-diphosphate reductase, small subunit
[Cryptosporidium muris RN66]
gi|209555699|gb|EEA05744.1| ribonucleotide-diphosphate reductase, small subunit, putative
[Cryptosporidium muris RN66]
Length = 346
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 242/324 (74%), Gaps = 4/324 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEP+L+ + + + +W MYKK EASFWTAEE+DL QD+R WE+L EKHF+
Sbjct: 27 EEPVLSSDTRLHQIIKSEIEVMWSMYKKEEASFWTAEEIDLGQDMRDWESLKEPEKHFIK 86
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIV+ENLA F+ E+Q+ EAR +YGFQIA+E IHSE YSLL++ YI D
Sbjct: 87 YVLAFFAASDGIVMENLAVNFLKEIQIEEARMYYGFQIAMEQIHSETYSLLIDQYISDVK 146
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF AI +P V KA WA W++ + +FAER+I F VEGI FSGSFCAIFWLKKR
Sbjct: 147 DRQMLFEAISHLPAVKTKAKWATKWMNNNRSFAERIIGFCAVEGILFSGSFCAIFWLKKR 206
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEG+H DF CLLY L +L RV+ ++ EAVE+ER F+CD+LP
Sbjct: 207 GLMPGLTFSNELISRDEGIHADFGCLLYKTLNNRLPYGRVQEIIAEAVEVERAFLCDSLP 266
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM+QYIEFVADRLL AL K+Y V NPFDWM+LISLQGKTNFFEKRV EY
Sbjct: 267 VDLIGMNSRLMAQYIEFVADRLLFALDVPKIYNVTNPFDWMDLISLQGKTNFFEKRVAEY 326
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
Q A VM+ + + +F +D +F
Sbjct: 327 QMAGVMA----HQKDQIFNLDAEF 346
>gi|410083375|ref|XP_003959265.1| hypothetical protein KAFR_0J00620 [Kazachstania africana CBS 2517]
gi|372465856|emb|CCF60130.1| hypothetical protein KAFR_0J00620 [Kazachstania africana CBS 2517]
Length = 391
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/326 (62%), Positives = 252/326 (77%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL +P+R +FPI++ +IW+ YK+AEASFWTAEE+DL +DL W + +EK F+
Sbjct: 67 EEPLLVADPNRKTVFPIKFHEIWQAYKRAEASFWTAEEIDLGKDLHDWNNRMNPNEKFFI 126
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDG+V ENL F EV + EA+AFYGFQI IENIHSE YSLL++TYIKD
Sbjct: 127 SRVLAFFAASDGLVNENLVENFSAEVAIPEAKAFYGFQIMIENIHSETYSLLIDTYIKDP 186
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI+T+P + +KA WAL WI+ +E+ FAERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 187 KESEFLFNAIDTIPQIKEKALWALRWINDAESPFAERLVAFAAIEGVFFSGSFASIFWLK 246
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ K + E V+ +V EAV IE+++ DA
Sbjct: 247 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKPAPEVVERIVTEAVAIEKQYFIDA 306
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM+QY+EFVADRLL A G K YGV NPFD+ME ISL GKTNFFEKRV
Sbjct: 307 LPVSLLGMNADLMNQYVEFVADRLLVAFGNKKFYGVENPFDFMENISLAGKTNFFEKRVS 366
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ A VMS G F I+EDF
Sbjct: 367 DYQYAGVMSKTTGTEEG-AFNINEDF 391
>gi|190896510|gb|ACE96768.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896556|gb|ACE96791.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896562|gb|ACE96794.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 212/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENIHSEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|89890041|ref|ZP_01201552.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
bacterium BBFL7]
gi|89518314|gb|EAS20970.1| ribonucleoside-diphosphate reductase small chain [Flavobacteria
bacterium BBFL7]
Length = 330
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/327 (60%), Positives = 256/327 (78%), Gaps = 4/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L NPDRF +FPIQ+ +WE YKK +A WTAEE+DL D+ W+ +L +DE++F+
Sbjct: 5 QEPILQENPDRFVIFPIQHDDLWEWYKKQQACIWTAEEIDLQVDITDWQNSLNSDERYFI 64
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDD 124
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK++LF AIE P + KA WA+ WI+ S +FAERLIAFA VEGIFFSG+FC+I+WLKK
Sbjct: 125 AEKDQLFRAIENFPAIKLKADWAMKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKK 183
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER+ ++ +A+ IEREF+ ++
Sbjct: 184 RGLMPGLTFSNELISRDEGMHCDFAVHLHNHHLVNKVPKERITEIIVDALNIEREFITES 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM+QY+EFV DRLLG L +Y V NPFD+M+LI ++GKTNFFEKRVG
Sbjct: 244 LPASLIGMNAKLMTQYLEFVTDRLLGELECDPVYNVTNPFDFMDLIGMEGKTNFFEKRVG 303
Query: 304 EYQKASVMSSLNGNGGN-HVFKIDEDF 329
EYQKA VM+S + + F +D DF
Sbjct: 304 EYQKAGVMNSTKDDKSSMDSFSLDADF 330
>gi|190896526|gb|ACE96776.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/223 (91%), Positives = 212/223 (95%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENI SEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYYVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|40556174|ref|NP_955259.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
gi|40233999|gb|AAR83582.1| CNPV236 ribonucleotide reductase small subunit [Canarypox virus]
Length = 323
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/327 (62%), Positives = 248/327 (75%), Gaps = 5/327 (1%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ EPLL NPDRF +FPIQ+ IW MYK+A ASFWT EEVDLS DL W+ L +E+ F
Sbjct: 1 MSSEPLLVNNPDRFVIFPIQHGDIWRMYKQAVASFWTVEEVDLSYDLIDWKNLKPEERRF 60
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++++LAFFA SDGIV ENL +F EVQ+ EAR FYGFQIAIENIHSEMYSLL++TYI D
Sbjct: 61 ISYILAFFAVSDGIVNENLVEKFCQEVQIPEARCFYGFQIAIENIHSEMYSLLIDTYIDD 120
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++EK RLF ++ T+ CV KK+ WAL WI+ S + ERL+AFA VEGIFFSGSF AIFWLK
Sbjct: 121 NNEKKRLFSSMRTMDCVRKKSEWALKWINDSAPYGERLVAFAAVEGIFFSGSFAAIFWLK 180
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCD 242
KRGLMPGLTFSNELISRDEGLHCDFACLL++ L K S++RV ++ AV +E EF+ +
Sbjct: 181 KRGLMPGLTFSNELISRDEGLHCDFACLLFTNYLSHKPSQDRVYEIIDSAVSVETEFLTE 240
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
AL L+GMN + M +YI+FV+DRLL +LG+ K Y V NPF +ME ISL+GK NFFEKRV
Sbjct: 241 ALSIDLIGMNSKSMIEYIKFVSDRLLVSLGFSKKYNVENPFSFMENISLEGKANFFEKRV 300
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
YQK VMS+ N +F D +F
Sbjct: 301 SNYQKMGVMSTKEEN----IFTTDAEF 323
>gi|332214017|ref|XP_003256123.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Nomascus leucogenys]
gi|332830969|ref|XP_003311933.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Pan
troglodytes]
gi|119612248|gb|EAW91842.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_c [Homo
sapiens]
gi|194385642|dbj|BAG65196.1| unnamed protein product [Homo sapiens]
Length = 297
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/301 (67%), Positives = 242/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++H+LAFFAASDGIV ENL RF E
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQV EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL++ L K SEERV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D D
Sbjct: 241 VELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|298207002|ref|YP_003715181.1| ribonucleoside-diphosphate reductase small chain [Croceibacter
atlanticus HTCC2559]
gi|83849636|gb|EAP87504.1| probable ribonucleoside-diphosphate reductase small chain
[Croceibacter atlanticus HTCC2559]
Length = 325
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/325 (63%), Positives = 254/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L N +RF +FPIQ+ IWE YKK EA FWTAEE+DL QDL W + L DE++F+
Sbjct: 5 EPILQKNENRFVIFPIQHNDIWEWYKKMEACFWTAEEIDLHQDLTDWNSKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEA 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF AIE P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFRAIEVFPAIKKKADWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L K+S+ER++ ++ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNKHLVNKVSKERIREIIVDALNIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN LM+QY+EFV DRLL L K Y ANPFD+M++ISLQGKTNFFEKRVG+
Sbjct: 244 PASLIGMNSNLMTQYLEFVTDRLLLELECEKEYNTANPFDFMDMISLQGKTNFFEKRVGD 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM + + N D DF
Sbjct: 304 YQKAGVM---DQDKDNSKISFDADF 325
>gi|254586079|ref|XP_002498607.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
gi|238941501|emb|CAR29674.1| ZYRO0G14388p [Zygosaccharomyces rouxii]
Length = 412
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 251/326 (76%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y +IW+ YK+AEASFWTAEE+DLS+DL W ++ E++F+
Sbjct: 88 DEPLLVENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLDDWNNKMSEGERYFI 147
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TY +D+
Sbjct: 148 SRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYSRDT 207
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+E LF+AIE +P + +KA WA+ WI D + +AERL+AFA VEG+FFSGSF AIFWLK
Sbjct: 208 EESEFLFNAIENIPPIKEKAEWAIRWIQDDTALYAERLVAFAAVEGVFFSGSFAAIFWLK 267
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ L+ + S + V+ ++ EAV IE+ + DA
Sbjct: 268 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNRPSPDIVERIITEAVSIEKRYFEDA 327
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN LM+QY+EFVADRLL ALG K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 328 LPVALLGMNAALMNQYVEFVADRLLVALGNEKYYNVTNPFDFMENISLAGKTNFFEKRVS 387
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VMS G+ FK DEDF
Sbjct: 388 DYQKAGVMSKTTEPQGD-TFKFDEDF 412
>gi|302682638|ref|XP_003031000.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
gi|300104692|gb|EFI96097.1| hypothetical protein SCHCODRAFT_57055 [Schizophyllum commune H4-8]
Length = 362
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/307 (65%), Positives = 247/307 (80%), Gaps = 2/307 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + RF +FPIQY +IW MYKK EASFWTAEE+DLS+DL WE + +E+HF+
Sbjct: 42 EEPLLKDSISRFVLFPIQYHEIWAMYKKEEASFWTAEEMDLSKDLHDWEERMNDNERHFI 101
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EV+V EAR FYGFQI +EN+HSE YSLL++TYI+D
Sbjct: 102 SHVLAFFAASDGIVNENLLTRFCGEVKVPEARCFYGFQIMMENVHSETYSLLIDTYIRDP 161
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ L +A+ET+PCV KKA WAL WI D +FA RL+AF+ VEGIFFSGSF +IFWLK
Sbjct: 162 AQRTFLLNAVETIPCVRKKAEWALRWIADRRSSFAIRLVAFSAVEGIFFSGSFASIFWLK 221
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI+RDEG+H DFACLL + +R + E ++ ++KEAV IE+EF+ DA
Sbjct: 222 KRGLMPGLTFSNELITRDEGMHTDFACLLLTHMRRRPHPEVIEMIIKEAVAIEKEFLTDA 281
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K++ NPFD+M++ISLQGKTNFFEKRV
Sbjct: 282 LPVSLIGMNADLMCQYIEFVADRLLVALGNDKVWNATNPFDFMDMISLQGKTNFFEKRVS 341
Query: 304 EYQKASV 310
+Y+ A+V
Sbjct: 342 DYKIAAV 348
>gi|17551968|ref|NP_497821.1| Protein RNR-2 [Caenorhabditis elegans]
gi|1172941|sp|P42170.1|RIR2_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|3873950|emb|CAA84688.1| Protein RNR-2 [Caenorhabditis elegans]
Length = 381
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 247/325 (76%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L +RF +FP+++ IW YKKA ASFWT EEVDL +D+ WE + DE++F++
Sbjct: 61 DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFIS 120
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+LAFFAASDGIV ENL RF EVQV+EAR FYGFQIAIENIHSEMYS L+ETYI+D
Sbjct: 121 RILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDET 180
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N LF+A++ + KKA WAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 181 ERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKK 240
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLT SNELISRDEGLH DFACLLYS L+ KL+++R+ ++K+AV IE+EF+ +AL
Sbjct: 241 RGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYDIIKDAVAIEQEFLTEAL 300
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P ++GMN LMSQYIEFVAD LL LG KLY NPFD+ME IS+ GKTNFFEKRV E
Sbjct: 301 PVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFMENISIDGKTNFFEKRVSE 360
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VM N F ++ DF
Sbjct: 361 YQRPGVMV----NEAERQFDLEADF 381
>gi|50311465|ref|XP_455757.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644893|emb|CAG98465.1| KLLA0F15103p [Kluyveromyces lactis]
Length = 401
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/327 (62%), Positives = 249/327 (76%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y +IWE YK+AEASFWTAEE+DLS+DL W + +E+ F+
Sbjct: 75 DEPLLVENKRRFVLFPIKYHEIWEAYKRAEASFWTAEEIDLSKDLHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ +LAFFAASDGIV ENL F EVQ EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 135 SRILAFFAASDGIVNENLVENFSAEVQAPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AIET+P + +KA WA+ WI D F ERL+AFA VEG+FFSGSF AIFWLK
Sbjct: 195 KESEFLFNAIETIPQIKEKAEWAIRWIQDDDALFGERLVAFAAVEGVFFSGSFAAIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ L+ K + E V+ ++ EAVEIE+ + DA
Sbjct: 255 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPNPEIVEKIITEAVEIEKRYFMDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM+QY+EFVADRLL ALG K + V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVSLLGMNADLMNQYVEFVADRLLVALGNKKYFNVTNPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA V++ S N + F DEDF
Sbjct: 375 DYQKAGVIAKSSNTEAQDGAFAFDEDF 401
>gi|148912897|ref|YP_001293211.1| hypothetical protein GTPV_gp017 [Goatpox virus Pellor]
Length = 321
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/324 (63%), Positives = 250/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L RF +FPI Y +IW MYKKA ASFWT +EVDLS+DL W+ L +E++F+ +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ +EAR FYGFQIAIENIHSEMYSLL++TYI + E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAIENIHSEMYSLLIDTYISSTKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+AIET+ + KK+ WA WI + +F ERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S + +K ++ EAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIIKIIINEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LMSQYIEF+ADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|443927278|gb|ELU45786.1| ribonucleotide reductase small subunit [Rhizoctonia solani AG-1 IA]
Length = 457
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/334 (62%), Positives = 248/334 (74%), Gaps = 20/334 (5%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL + RF +FPIQY +IW+MYKKAEASFWTAEE+DLS+DL W+ L +E+HF+
Sbjct: 134 DEPLLKESRRRFVLFPIQYHEIWQMYKKAEASFWTAEEMDLSKDLHDWDNKLNDNERHFI 193
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQ AEA ENIHSE YSLL++TYIK+
Sbjct: 194 SHVLAFFAASDGIVNENLVERFSNEVQAAEA----------ENIHSETYSLLIDTYIKEP 243
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AIET+PC+ KKA WAL WI D TFAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 244 AQREFLFDAIETIPCIKKKADWALKWISDRRSTFAERLVAFAAVEGIFFSGSFASIFWLK 303
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+S LR + E V+ ++ EAV IE+EF+ DA
Sbjct: 304 KRGLMPGLTFSNELISRDEGMHTDFACLLFSHLRKRPHPETVRRIIVEAVAIEQEFLTDA 363
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM QYIEFVADRLL ALG K Y NPFD+M++ISLQGKTNFFEKRV
Sbjct: 364 LPVGLIGMNARLMCQYIEFVADRLLVALGNTKEYNSTNPFDFMDMISLQGKTNFFEKRVS 423
Query: 304 EYQKASVMSS--------LNGNGGNHVFKIDEDF 329
+Y KA V ++ + +F +DEDF
Sbjct: 424 DYAKAGVKTTSTDPATEPTRTAASSKLFSLDEDF 457
>gi|422933569|ref|YP_007003693.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 1]
gi|386685975|gb|AFJ20328.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 1]
Length = 340
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/332 (63%), Positives = 253/332 (76%), Gaps = 11/332 (3%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + EEPLL P+ +++ + I YP IW MYKKA ASFWT EEVDL +D++ W ALT +E+
Sbjct: 16 PVVVEEPLLTPSLEKYTLNRIDYPDIWGMYKKALASFWTVEEVDLGKDVQGWNALTHNER 75
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF+ HVLAFFAASDGIV ENL RF TEVQV EARAFYGFQIAIEN+HSEMY+ LL TY+
Sbjct: 76 HFLKHVLAFFAASDGIVNENLLERFSTEVQVFEARAFYGFQIAIENVHSEMYAKLLTTYV 135
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
D+ E +LF AIET+PC+ KKA WAL+WI D + +F ERL AFA VEGIFFSGSF AIF
Sbjct: 136 ADAGECKKLFRAIETMPCIKKKADWALSWISDKNASFGERLTAFAAVEGIFFSGSFAAIF 195
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREF 239
WLK+RG+MPGL FSN LISRDEGLH DFAC+LY+ LR K SE RVK +V EAV+IE+EF
Sbjct: 196 WLKQRGVMPGLCFSNVLISRDEGLHRDFACMLYAKHLRNKPSESRVKQIVGEAVQIEKEF 255
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ ALP +L+GMN LMS+YIE+VAD LL +G ++Y NPF +ME ISL+GKTNFFE
Sbjct: 256 LTKALPVSLIGMNITLMSKYIEYVADHLLEQMGLTRVYNTPNPFLFMENISLEGKTNFFE 315
Query: 300 KRVGEYQ--KASVMSSLNGNGGNHVFKIDEDF 329
RVG+YQ A+V+S N F D DF
Sbjct: 316 NRVGDYQVKTAAVVS-------NDTFMADIDF 340
>gi|21492474|ref|NP_659593.1| Ribonucleotide reductase, small subunit [Sheeppox virus]
Length = 321
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/324 (63%), Positives = 250/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L RF +FPI Y +IW MYKKA ASFWT +EVDLS+DL W+ L +E++F+ +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLSDWKKLNNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ +EAR FYGFQIA+ENIHSEMYSLL++TYI + E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+AIET+ + KK+ WA WI + +F ERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEYLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S E + ++KEAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNEIITIIIKEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LMSQYIEF+ADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMSINPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|389747382|gb|EIM88561.1| hypothetical protein STEHIDRAFT_54000 [Stereum hirsutum FP-91666
SS1]
Length = 382
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/325 (63%), Positives = 246/325 (75%), Gaps = 15/325 (4%)
Query: 1 MPSIPE-------------EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLS 47
+PS+P+ EPLL + RF +FPIQY +IW MYKKAEASFWTAEE+D+S
Sbjct: 18 LPSLPQTRFVGEVDLPEEREPLLIESKRRFVLFPIQYHEIWRMYKKAEASFWTAEEIDMS 77
Query: 48 QDLRHW-EALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIE 106
+DL W L +E++F++H+LAFFAASDGIV ENL RF EVQ AEAR FYGFQI +E
Sbjct: 78 KDLMDWNHRLNDNERYFISHILAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMME 137
Query: 107 NIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFA 165
NIHSE YS L+ +YI D +E+ LF AIET+PCV +KA WAL WI D +FAERL+AFA
Sbjct: 138 NIHSETYSQLINSYIADPEEREFLFDAIETIPCVKRKADWALRWIEDRRSSFAERLVAFA 197
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERV 225
VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEG+H DFACLL+ L+ + E V
Sbjct: 198 AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGMHTDFACLLFGHLKRRPHPEVV 257
Query: 226 KALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDW 285
++ EAV IE+EF+ DALP L+GMN LM QYIEFVADRLL ALG K Y V NPFD+
Sbjct: 258 SIIISEAVAIEQEFLTDALPVGLIGMNAALMCQYIEFVADRLLVALGNPKHYHVNNPFDF 317
Query: 286 MELISLQGKTNFFEKRVGEYQKASV 310
M++ISL+GKTNFFEKRV +Y KA V
Sbjct: 318 MDMISLEGKTNFFEKRVSDYAKAGV 342
>gi|325286576|ref|YP_004262366.1| ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
gi|324322030|gb|ADY29495.1| Ribonucleoside-diphosphate reductase [Cellulophaga lytica DSM 7489]
Length = 328
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/325 (61%), Positives = 255/325 (78%), Gaps = 4/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI++ +W+ YKK EASFWTAEE+DL DL W+ L DE++F+
Sbjct: 6 EPILEKNEDRFVIFPIKHNDLWDWYKKCEASFWTAEEIDLHADLDDWKNKLNDDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F++EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+ LFHA+E P + KKA WAL WI+ S +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 126 EKDILFHALENFPAIRKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGSFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCD+A L++ L K+ +ER+ ++ +A++IEREF+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNHHLINKVPKERITEILVDALDIEREFITESL 244
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL L K+Y NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PVSLIGMNSKLMTQYLEFVTDRLLVELNCDKVYNSTNPFDFMDMISLQGKTNFFEKRVAE 304
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQK+ V ++ +G+ + D DF
Sbjct: 305 YQKSGVANNNDGDDAQKI-SFDADF 328
>gi|308490981|ref|XP_003107682.1| CRE-RNR-2 protein [Caenorhabditis remanei]
gi|308250551|gb|EFO94503.1| CRE-RNR-2 protein [Caenorhabditis remanei]
Length = 377
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/308 (65%), Positives = 244/308 (79%), Gaps = 1/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL +RF +FP+++ +IW+ YKKA ASFWT EEVDL +D+ WE + DE++F++
Sbjct: 58 EPLLQDLDNRFVIFPLRHHEIWQFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISR 117
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EV+V+EAR FYGFQIAIENIHSEMYS L+ETYI+D E
Sbjct: 118 VLAFFAASDGIVNENLCERFSNEVKVSEARFFYGFQIAIENIHSEMYSKLIETYIRDEKE 177
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF+AI + KKA WA+ WI D +FAERLIAFA VEGIFFSGSF +IFWLKKR
Sbjct: 178 RLTLFNAIFEFEFIKKKADWAMKWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKKR 237
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLYS+L+ KL++ER+ ++++AV IE+EF+ +ALP
Sbjct: 238 GLMPGLTHSNELISRDEGLHRDFACLLYSMLQNKLTQERIFEIIRDAVCIEQEFLTEALP 297
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LMSQYIEFVAD LL LG KLY V NPFD+ME IS+ GKTNFFEKRV EY
Sbjct: 298 VDMIGMNCRLMSQYIEFVADHLLAELGCDKLYNVKNPFDFMENISIDGKTNFFEKRVSEY 357
Query: 306 QKASVMSS 313
Q+ VMS+
Sbjct: 358 QRPGVMST 365
>gi|344234526|gb|EGV66394.1| hypothetical protein CANTEDRAFT_112123 [Candida tenuis ATCC 10573]
Length = 423
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/328 (62%), Positives = 249/328 (75%), Gaps = 4/328 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DL +D W L +E+ FV
Sbjct: 96 DEPLLVENTKRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLGKDTHDWNNRLNDNERFFV 155
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ +LAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL+++YIKD
Sbjct: 156 SRILAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDSYIKDP 215
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AIET+P + +KA WAL WI+ S+ F ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 216 KEADFLFNAIETIPQIKRKADWALRWINDSDALFGERLVAFAAVEGIFFSGSFASIFWLK 275
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L+ + + E V+ ++ EAV IE+E+ DA
Sbjct: 276 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLQNRPNPEIVEQIITEAVAIEKEYFTDA 335
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QY+EFVADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 336 LPISLLGMNCTLMCQYVEFVADRLLVALGNEKVYNTTNPFDFMENISLAGKTNFFEKRVS 395
Query: 304 EYQKASVMSSLNGN--GGNHVFKIDEDF 329
+YQKA VM+S + F D+DF
Sbjct: 396 DYQKAGVMASTSTTEVKTESGFTFDDDF 423
>gi|320580024|gb|EFW94247.1| Small subunit of the ribonucleotide-diphosphate reductase (RNR)
complex [Ogataea parapolymorpha DL-1]
Length = 408
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/328 (63%), Positives = 246/328 (75%), Gaps = 4/328 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
+EPLL N RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L +E++FV
Sbjct: 81 DEPLLVENKRRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDNERYFV 140
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 141 SRVLAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYVKDP 200
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AIET+PC+ +KA WA+ WI+ E FAERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 201 KEAEFLFNAIETIPCIKEKAEWAMRWINDEEALFAERLVAFAAVEGIFFSGSFASIFWLK 260
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL+S L + + V ++ EAV+IE+ + DA
Sbjct: 261 KRGLMPGLTFSNELICRDEGLHTDFACLLFSHLNNTPNNDIVLKIITEAVDIEKRYFTDA 320
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+GMN LM QY+EFVADRLL +LG K Y NPFD+ME ISL GKTNFFEKRV
Sbjct: 321 LPVNLLGMNCSLMCQYVEFVADRLLLSLGCKKHYNATNPFDFMENISLAGKTNFFEKRVS 380
Query: 304 EYQKASVMSSLNGNGGNHV--FKIDEDF 329
+YQKA VM+ + F DEDF
Sbjct: 381 DYQKAGVMAKNTQEKADTETGFTFDEDF 408
>gi|219110949|ref|XP_002177226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411761|gb|EEC51689.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 409
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/317 (64%), Positives = 242/317 (76%), Gaps = 3/317 (0%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAAS 74
RF +FPI++ +W MYK+ ASFWT +E+DLS DL W E L +E+HF++ VLAFFA +
Sbjct: 93 RFSLFPIEHDDLWGMYKQHVASFWTVDEIDLSADLTDWHERLNDNERHFISMVLAFFAGA 152
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
DGIV+ENLA RF EV V EARAFYGFQ+A+E IH E Y LL+++YI D ++ LF A
Sbjct: 153 DGIVVENLAERFCREVTVPEARAFYGFQMAMEGIHQETYCLLIDSYISDPKDREMLFAAH 212
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
VP V KKA WA +I +FAERL+AFA VEGIFFSG+FC+IFWLKKRGLMPGLTFS
Sbjct: 213 TKVPSVEKKARWAQRYIGSDASFAERLVAFAAVEGIFFSGAFCSIFWLKKRGLMPGLTFS 272
Query: 195 NELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGE 254
NELISRDEGLHC FAC LYS L KLSE + L+ EAVE+E+ FVCDALP L+GMN
Sbjct: 273 NELISRDEGLHCSFACQLYSKLERKLSETDMHKLIGEAVEVEKGFVCDALPVGLIGMNAS 332
Query: 255 LMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSL 314
LMSQY+EFVADRLL LGY LYG NPFDWM++ISL+GKTNFFEKRVGEYQK+ VM+SL
Sbjct: 333 LMSQYVEFVADRLLHDLGYRTLYGSKNPFDWMDMISLEGKTNFFEKRVGEYQKSGVMASL 392
Query: 315 NGN--GGNHVFKIDEDF 329
+ + G F +D DF
Sbjct: 393 SDDHTHGRKSFNLDADF 409
>gi|444322760|ref|XP_004182021.1| hypothetical protein TBLA_0H02160 [Tetrapisispora blattae CBS 6284]
gi|387515067|emb|CCH62502.1| hypothetical protein TBLA_0H02160 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/321 (65%), Positives = 246/321 (76%), Gaps = 4/321 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
E LL + R ++PI YP I+E YK+AEASFWTAEE+DLS+DL W +T +E+ F++
Sbjct: 79 EVLLNKDKKRKIIYPILYPDIYEAYKRAEASFWTAEEIDLSKDLHDWNNRMTPNERFFIS 138
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F EVQV EA+ FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 139 RVLAFFAASDGIVNENLVENFSVEVQVPEAKMFYGFQIMIENIHSETYSLLIDTYIKDPR 198
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF+AIET+P + +KA WAL WI+ + TFAERL+AFA +EGIFFSGSF AIFWLKK
Sbjct: 199 ESTFLFNAIETIPQIKEKAIWALRWINAEDATFAERLVAFASIEGIFFSGSFAAIFWLKK 258
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
+GLMPGLTFSNELI RDEGLH DFACLL+S L K+ E V+ +V EAVEIE+ + DAL
Sbjct: 259 KGLMPGLTFSNELICRDEGLHTDFACLLFSHLENKIKPEIVEKIVTEAVEIEKGYFRDAL 318
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM+QY+EFVADRLL A G K+Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 319 PVALLGMNADLMNQYVEFVADRLLIAFGNPKVYNVENPFDFMENISLAGKTNFFEKRVSD 378
Query: 305 YQKASVM--SSLNGNGGNHVF 323
YQKASVM SS GG F
Sbjct: 379 YQKASVMAVSSNKETGGAMAF 399
>gi|190896508|gb|ACE96767.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896514|gb|ACE96770.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896522|gb|ACE96774.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896540|gb|ACE96783.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896542|gb|ACE96784.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 202/223 (90%), Positives = 211/223 (94%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENI SEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|365759956|gb|EHN01709.1| Rnr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKFYNVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|401625096|gb|EJS43121.1| rnr2p [Saccharomyces arboricola H-6]
Length = 399
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/327 (62%), Positives = 248/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQV EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQVPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFNFNEDF 399
>gi|372209392|ref|ZP_09497194.1| ribonucleoside-diphosphate reductase small chain [Flavobacteriaceae
bacterium S85]
Length = 323
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/325 (61%), Positives = 253/325 (77%), Gaps = 8/325 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L +P+RF +FPI++ IWE YKK EAS WTAEE+DL QD+ WE L DE++F+
Sbjct: 5 EPILQEDPNRFVIFPIKHQDIWEWYKKQEASIWTAEEIDLHQDISDWENKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+TEVQ AEA+ FYGFQI +ENIHSE+YSLL++TY+K+ +
Sbjct: 65 HILAFFAASDGIVNENLAENFVTEVQYAEAKFFYGFQIMMENIHSEVYSLLIDTYVKNEE 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN+LF AIE P + KA WAL WI+ SE+FAERLIAFA VEGIFFSGSFCAIFW+KKR
Sbjct: 125 EKNKLFKAIEHFPAIKLKADWALKWIE-SESFAERLIAFAAVEGIFFSGSFCAIFWMKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GL+PGLTFSNELISRDEGLHCDFA L+ + + K+ +ER+ ++ A++IE+ F+ ++L
Sbjct: 184 GLLPGLTFSNELISRDEGLHCDFAVHLHNNHIINKVPKERITEIITNALDIEKVFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL G K+Y NPFD+M++ISL+GKTNFFEKRV +
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLVEFGCDKVYNSTNPFDFMDMISLEGKTNFFEKRVSD 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V S GG D DF
Sbjct: 304 YQKAGVKS-----GGTGEISFDADF 323
>gi|73852496|ref|YP_293780.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 86]
gi|72415212|emb|CAI65449.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 86]
Length = 325
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/324 (60%), Positives = 245/324 (75%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL N DRF +FPI + I+E YKKAEAS W E+D+S D W LT +E+HF+ +
Sbjct: 3 EPLLIENKDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA +DGIV ENL F +E+Q EAR FYG Q+ IEN+H+E YS++L++ ++D DE
Sbjct: 63 ILAFFATADGIVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF AI T+ + KA WAL W++ +FAERLIAFA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY + + KL E V ++ AVE+ER F+C+ALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEALP 242
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N E MS YI+FVADRLL +LGY K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISLGYAKHYNVVNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM +LN + H F +DE+F
Sbjct: 303 QKAGVMDALN-DSSKHGFTLDEEF 325
>gi|50949848|emb|CAH10473.1| hypothetical protein [Homo sapiens]
Length = 297
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/301 (67%), Positives = 241/301 (80%), Gaps = 5/301 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++H+LAFFAASDGIV ENL RF E
Sbjct: 1 MYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQV EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL
Sbjct: 61 VQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALR 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDF
Sbjct: 121 WIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL++ L K EERV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 181 ACLMFQYLVNKPPEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLL 240
Query: 269 GALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDED 328
LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D D
Sbjct: 241 VELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDAD 296
Query: 329 F 329
F
Sbjct: 297 F 297
>gi|357289644|gb|AET72957.1| ribonucleoside-diphosphate reductase small subunit [Phaeocystis
globosa virus 12T]
gi|357292439|gb|AET73775.1| ribonucleoside-diphosphate reductase small subunit [Phaeocystis
globosa virus 14T]
Length = 325
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/304 (64%), Positives = 241/304 (79%), Gaps = 1/304 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL P+ +RF MFPI+ +IW+MYKK + FWT+ EVDLS+D HWEALT DEKHF++
Sbjct: 7 EPLLTPDDNRFVMFPIKDDEIWQMYKKQQDLFWTSTEVDLSKDPAHWEALTGDEKHFISM 66
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIVLENL RFM EVQ+AEARAFYG QIA+ENIHS YS L++TYIKD+ +
Sbjct: 67 ILAFFAASDGIVLENLGTRFMGEVQLAEARAFYGLQIAMENIHSITYSTLIDTYIKDTVQ 126
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K++LF+AI PC+ KK+ WA+ WI D +FA RL+AFA VEGIFFSG+FC+IFWLKKR
Sbjct: 127 KHKLFNAISEFPCIKKKSDWAIKWIQDKRASFATRLVAFAVVEGIFFSGAFCSIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
G++PGL FSNELISRDE LH +FA LL+S L L + +++ +++EAVEIE EF+ ALP
Sbjct: 187 GILPGLCFSNELISRDEALHTEFAVLLHSKLERPLKKNKIEEIIREAVEIEVEFINSALP 246
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LM +YIEFVADRL LG K+YG ANPFDWME IS++ KTNFFE RV EY
Sbjct: 247 CRLIGMNDVLMQRYIEFVADRLAVQLGGDKIYGSANPFDWMESISIESKTNFFEARVAEY 306
Query: 306 QKAS 309
A+
Sbjct: 307 SLAT 310
>gi|392568086|gb|EIW61260.1| hypothetical protein TRAVEDRAFT_63110 [Trametes versicolor
FP-101664 SS1]
Length = 428
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/335 (61%), Positives = 247/335 (73%), Gaps = 11/335 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
+EPLL RF +FPIQY +IW+MYK A+ASFWT EE++LS DL W + L +E+HF+
Sbjct: 94 QEPLLTETTRRFVLFPIQYDEIWQMYKTAQASFWTVEEINLSYDLMDWSDKLNDNERHFI 153
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
++VLAFFAASDGIV ENL RF EVQ AEAR FYGFQI +EN+HSE YSLL++TYI+D
Sbjct: 154 SYVLAFFAASDGIVNENLVERFSNEVQAAEARCFYGFQIMMENVHSETYSLLIDTYIRDP 213
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ LF AI+T+PC+ KKA WAL WI D F ERL+AFA VEGIFFSGSF AIFWLK
Sbjct: 214 AARAFLFDAIDTIPCIKKKADWALRWIADERSAFTERLVAFAAVEGIFFSGSFAAIFWLK 273
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEG+H DFACLL+ LR + RV ++ EAV+IE+EF+ +A
Sbjct: 274 KRGLMPGLTFSNELISRDEGMHTDFACLLFHHLRRRAHPNRVLKIIIEAVDIEKEFLTEA 333
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K Y NPFD+M++ISL GKTNFFEKRV
Sbjct: 334 LPVSLIGMNADLMCQYIEFVADRLLVALGSEKHYRATNPFDFMDMISLTGKTNFFEKRVS 393
Query: 304 EYQKASVMSSLNGNG---------GNHVFKIDEDF 329
EY A +G + +F +DEDF
Sbjct: 394 EYSMAGFQRGGAQDGPGQPPAEGPASRLFTMDEDF 428
>gi|385302064|gb|EIF46214.1| ribonucleoside-diphosphate reductase small chain [Dekkera
bruxellensis AWRI1499]
Length = 409
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 248/323 (76%), Gaps = 3/323 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL N RF MFPIQY IW+MYKKAEASFWTAEE+DLS+DL W + A+E++F++
Sbjct: 86 EPLLKENIHRFVMFPIQYDDIWQMYKKAEASFWTAEEIDLSKDLTDWNNKMNANERYFIS 145
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENLA FM +VQ+ EARAFYGFQI +ENIHSE YSLLLETYI D
Sbjct: 146 RVLAFFAASDGIVDENLAQNFMKQVQLPEARAFYGFQIMVENIHSETYSLLLETYITDKK 205
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AI T+P + +KA WAL WI+ + +AERL+AFA +EG+FFSGSF +IFWLKK
Sbjct: 206 ESDYLFNAIHTIPPIKEKALWALRWINNDDALYAERLVAFAAIEGVFFSGSFASIFWLKK 265
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL+S L+ S+ +K ++ EAV IE+ F DAL
Sbjct: 266 RGLMPGLTFSNELICRDEGLHTDFACLLFSHLKHPPSKVIIKXIMTEAVNIEKTFWSDAL 325
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN ++M+ Y+ F ADRLL ALG K+Y NPFD+ME ISL GKTNFFEKRV +
Sbjct: 326 PVSLLGMNFDMMAXYVXFCADRLLIALGCEKVYNATNPFDFMENISLAGKTNFFEKRVSD 385
Query: 305 YQKASVMSS-LNGNGGNHVFKID 326
YQKA VM+ L G+ + F D
Sbjct: 386 YQKAGVMAKELEGSNNDISFNXD 408
>gi|323308423|gb|EGA61668.1| Rnr2p [Saccharomyces cerevisiae FostersO]
Length = 399
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|290771185|emb|CAY80753.2| Rnr2p [Saccharomyces cerevisiae EC1118]
gi|365764844|gb|EHN06363.1| Rnr2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|323347997|gb|EGA82256.1| Rnr2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 399
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|347481850|gb|AEO97836.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 84]
gi|347600475|gb|AEP14962.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 88]
Length = 325
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 245/324 (75%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL N DRF +FPI + I+E YKKAEAS W E+D+S D W LT +E+HF+ +
Sbjct: 3 EPLLIENEDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA +DG+V ENL F +E+Q EAR FYG Q+ IEN+H+E YS++L++ ++D DE
Sbjct: 63 ILAFFATADGVVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF AI T+ + KA WAL W++ +FAERLIAFA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY + + KL E V ++ AVE+ER F+C+ALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEALP 242
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N E MS YI+FVADRLL +LGY K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISLGYAKHYNVVNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM +LN + H F +DE+F
Sbjct: 303 QKAGVMDALN-DSSKHGFTLDEEF 325
>gi|401841001|gb|EJT43584.1| RNR2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 367
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 43 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 102
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 103 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 162
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 163 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 222
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 223 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 282
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 283 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKFYNVENPFDFMENISLAGKTNFFEKRVS 342
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 343 DYQKAGVMSKSTNQEAG--AFTFNEDF 367
>gi|151945057|gb|EDN63308.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae YJM789]
gi|190409471|gb|EDV12736.1| ribonucleotide reductase subunit [Saccharomyces cerevisiae RM11-1a]
gi|256271075|gb|EEU06176.1| Rnr2p [Saccharomyces cerevisiae JAY291]
gi|349579170|dbj|GAA24333.1| K7_Rnr2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 399
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 248/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|190896546|gb|ACE96786.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/223 (90%), Positives = 211/223 (94%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENI SEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL W+DGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWMDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYNVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|305665630|ref|YP_003861917.1| putative ribonucleoside-diphosphate reductase small chain
[Maribacter sp. HTCC2170]
gi|88710386|gb|EAR02618.1| probable ribonucleoside-diphosphate reductase small chain
[Maribacter sp. HTCC2170]
Length = 328
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/329 (61%), Positives = 250/329 (75%), Gaps = 4/329 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEK 61
S EP+L N DRF +FPIQ+ +WE YKK EA WTAEE+DL QDL W L DEK
Sbjct: 2 STAVEPILQENKDRFVIFPIQHHDLWEWYKKQEACIWTAEEIDLHQDLTDWNTKLNDDEK 61
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F+ H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+
Sbjct: 62 YFIKHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYV 121
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
KD EK+ LF AIE P + KKA WAL WI+ S +FAERLIAFA VEGIFFSGSFC+IFW
Sbjct: 122 KDDKEKDILFKAIENFPAIKKKADWALKWIE-SPSFAERLIAFAAVEGIFFSGSFCSIFW 180
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFV 240
LKKRGLMPGLTFSNELISRDEG+HCD+A L+ + + K+++ER+ ++ +A+ IEREF+
Sbjct: 181 LKKRGLMPGLTFSNELISRDEGMHCDYAVHLHKNHIVNKVTKERITDIIVDALNIEREFI 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
++LP +L+GMN +LM+QY+EFV DRLL L K+Y +NPFD+M++ISLQGKTNFFEK
Sbjct: 241 TESLPVSLIGMNSKLMTQYLEFVTDRLLVELECDKVYNSSNPFDFMDMISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RV EYQKA V++ + D DF
Sbjct: 301 RVSEYQKAGVLNKDKDEDAQKI-SFDADF 328
>gi|363754041|ref|XP_003647236.1| hypothetical protein Ecym_6011 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890873|gb|AET40419.1| hypothetical protein Ecym_6011 [Eremothecium cymbalariae
DBVPG#7215]
Length = 436
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 205/327 (62%), Positives = 247/327 (75%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y IW+ YK+AEASFWTAEE+DLS+D+ W +T +E++F+
Sbjct: 110 DEPLLMENKRRFVLFPIKYHDIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMTDNERYFI 169
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQV EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 170 SRVLAFFAASDGIVNENLVENFSAEVQVPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 229
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+A+ET+P + +KA WA+ WI D F ERL+AFA VEGIFFSGSF AIFWLK
Sbjct: 230 KESEFLFNAVETIPEIKEKAEWAIRWIQDEDALFGERLVAFAAVEGIFFSGSFAAIFWLK 289
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ LR K + V+ ++ EAV+IE+ + DA
Sbjct: 290 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLRNKPDPKIVERIITEAVDIEKRYFIDA 349
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+P AL+GMN LMSQY+EFVADRLL ALG K + V NPFD+ME ISL GKTNFFEKRV
Sbjct: 350 IPVALLGMNAGLMSQYVEFVADRLLVALGNRKYFNVTNPFDFMENISLAGKTNFFEKRVS 409
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VM+ S F DEDF
Sbjct: 410 DYQKAGVMAKSSKQESETGAFTFDEDF 436
>gi|225010999|ref|ZP_03701465.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-3C]
gi|225004906|gb|EEG42862.1| Ribonucleoside-diphosphate reductase [Flavobacteria bacterium
MS024-3C]
Length = 328
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/323 (62%), Positives = 253/323 (78%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L NPDRF +FPI++ +WE YKK EA FWTAEE+DLS+DL W L DE++FV
Sbjct: 6 EPILTENPDRFVIFPIKHDDLWEWYKKCEACFWTAEEIDLSEDLNDWNNKLNEDERYFVK 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F++EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EKN+LF A+E P + +KA WAL WI+ S +FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKNKLFKALENFPAIKEKADWALKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCD+A L++ L K+ + R++ ++ +A+ IER F+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNHHLINKVPKARIREILVDALNIERTFITESL 244
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL L K Y V+NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PASLIGMNAKLMTQYLEFVTDRLLVELQCEKEYNVSNPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMS-SLNGNGGNHVFKID 326
YQKA V++ + N N F D
Sbjct: 305 YQKAGVLNKDQDVNAQNISFDAD 327
>gi|190896518|gb|ACE96772.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 223
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/223 (90%), Positives = 211/223 (94%)
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AGR M EVQV+EARAFYGFQIAIENI SEMYSLLLETYIKDS+EKNRLFHA+ETVPCVAK
Sbjct: 1 AGRLMKEVQVSEARAFYGFQIAIENIRSEMYSLLLETYIKDSEEKNRLFHAMETVPCVAK 60
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WAL WIDGSE+ AERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE
Sbjct: 61 KAQWALRWIDGSESCAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 120
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACLLYSLLR KLSEERVK +VK+AV+IEREFV DALPCALVGMNGELMSQYIEF
Sbjct: 121 GLHCDFACLLYSLLRKKLSEERVKGIVKDAVDIEREFVVDALPCALVGMNGELMSQYIEF 180
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
VADRLLGALG GK+Y VANPFD MELISLQGKTNFFEKRVGEY
Sbjct: 181 VADRLLGALGCGKVYYVANPFDGMELISLQGKTNFFEKRVGEY 223
>gi|283481249|emb|CAZ69365.1| ribonucleoside-diphosphate reductase small chain [Emiliania huxleyi
virus 99B1]
Length = 325
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/324 (59%), Positives = 245/324 (75%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L N DRF +FPI + I+E YKKAEAS W E+D+S D W LT +E+HF+ +
Sbjct: 3 EPILIENEDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA +DG+V ENL F +E+Q EAR FYG Q+ IEN+H+E YS++L++ ++D DE
Sbjct: 63 ILAFFATADGVVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF AI T+ + KA WAL W++ +FAERLIAFA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY + + KL E V ++ AVE+ER F+C+ALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITNAVELERLFICEALP 242
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N E MS YI+FVADRLL +LGY K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISLGYAKHYNVVNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM +LN + H F +DE+F
Sbjct: 303 QKAGVMDALN-DSSKHGFTLDEEF 325
>gi|347482302|gb|AEO98243.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 203]
gi|347601085|gb|AEP15571.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 207]
gi|347601558|gb|AEP16043.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 208]
gi|357972640|gb|AET97913.1| ribonucleoside-diphosphate reductase small subunit [Emiliania
huxleyi virus 201]
Length = 325
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 245/324 (75%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPL+ N DRF +FPI + I+E YKKAEAS W E+D+S D W LT +E+HF+ +
Sbjct: 3 EPLIIENKDRFVLFPIVHEDIYEEYKKAEASLWGVSEIDISTDKTDWPKLTENEQHFIKY 62
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA +DGIV ENL F +E+Q EAR FYG Q+ IEN+H+E YS++L++ ++D DE
Sbjct: 63 ILAFFATADGIVFENLVTNFASEIQYPEARCFYGVQMMIENVHAETYSMMLQSLVEDKDE 122
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF AI T+ + KA WAL W++ +FAERLIAFA VEGIFFSG+FCAIFWLKKR
Sbjct: 123 QRNLFRAIRTIQSIKNKADWALKWMNNERSFAERLIAFAVVEGIFFSGAFCAIFWLKKRA 182
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
+MPGLTFSNELISRDEGLH DFAC+LY + + KL E V ++ AVE+ER F+C+ALP
Sbjct: 183 IMPGLTFSNELISRDEGLHTDFACMLYRNHIIHKLPYETVLDIITHAVELERLFICEALP 242
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+G+N E MS YI+FVADRLL +LGY K Y V NPF+WMELISL+GKTNFFEKRVGEY
Sbjct: 243 VSLIGINAESMSTYIKFVADRLLISLGYEKHYNVVNPFEWMELISLEGKTNFFEKRVGEY 302
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA VM +LN + H F +DE+F
Sbjct: 303 QKAGVMDALN-DSSKHGFTLDEEF 325
>gi|66475262|ref|XP_627447.1| ribonucleotide reductase small subunit, duplicated adjacent gene
[Cryptosporidium parvum Iowa II]
gi|9652154|gb|AAF91416.1|AF275635_1 ribonucleotide reductase R2 subunit [Cryptosporidium parvum]
gi|46228920|gb|EAK89769.1| ribonucleotide reductase small subunit, duplicated adjacent gene
[Cryptosporidium parvum Iowa II]
Length = 352
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/323 (61%), Positives = 238/323 (73%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L + + IW MYKKAEASFW EE+DLSQD R WE+L E+HF+ +
Sbjct: 34 EPMLKYSRENRNELKELIKDIWSMYKKAEASFWVTEEIDLSQDTRDWESLKDPERHFIKY 93
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV+ENLA F+ E+Q+ EAR +Y FQ++IE IHSE YSLL++ YI + E
Sbjct: 94 VLAFFAASDGIVMENLAVNFLREIQIPEARMYYAFQMSIEQIHSETYSLLIDRYITEIKE 153
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF AI + V KKA WA W++ +FAER+I F VEGI FSGSFCAIFWLKKRG
Sbjct: 154 RQMLFEAISHIEAVKKKAEWATKWMNSERSFAERIIGFCAVEGILFSGSFCAIFWLKKRG 213
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACL+Y L+ KL RV+ ++ EAVE+ER F+CD+LP
Sbjct: 214 LMPGLTFSNELISRDEGLHADFACLIYKALKFKLPAPRVQQIISEAVEVERNFLCDSLPV 273
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LM+QYIEFVADRLL AL K+Y V+NPFDWM+LISLQGKTNFFEKRVGEYQ
Sbjct: 274 DLIGMNSRLMAQYIEFVADRLLFALDIPKIYNVSNPFDWMDLISLQGKTNFFEKRVGEYQ 333
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
A VM N + F ++ DF
Sbjct: 334 MAGVMV----NQDDQKFDLNADF 352
>gi|449329429|gb|AGE95701.1| ribonucleoside diphosphate reductase small chain [Encephalitozoon
cuniculi]
Length = 325
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 250/324 (77%), Gaps = 7/324 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL P +RF + PI+Y IW+MYKKAE+SFWT EEV L +D+ W L A E+HF+++
Sbjct: 8 ELLLDPREERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISY 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV NL RF TEV+V EAR FYGFQ+AIENIHSEMYSLL++TYI+D+DE
Sbjct: 68 VLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN LF AI T+P V +KA WA+ WI D + FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 128 KNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHC+FACLL+ L+ K + R+K +V +AVEIE++F+ ++LP
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSESLP 245
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM +YIEFVADRLL LG ++Y NPFD+ME ISL GKTNFF+KR +Y
Sbjct: 246 VNLIGMNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRESQY 305
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA V GN F+ID DF
Sbjct: 306 QKAFV----GIENGNDSFRIDVDF 325
>gi|19074323|ref|NP_585829.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
cuniculi GB-M1]
gi|51701822|sp|Q8SRR2.1|RIR2_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|19068965|emb|CAD25433.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE SMALL CHAIN [Encephalitozoon
cuniculi GB-M1]
Length = 325
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 250/324 (77%), Gaps = 7/324 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL P +RF + PI+Y IW+MYKKAE+SFWT EEV L +D+ W L A E+HF+++
Sbjct: 8 ELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISY 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV NL RF TEV+V EAR FYGFQ+AIENIHSEMYSLL++TYI+D+DE
Sbjct: 68 VLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN LF AI T+P V +KA WA+ WI D + FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 128 KNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHC+FACLL+ L+ K + R+K +V +AVEIE++F+ ++LP
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSESLP 245
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM +YIEFVADRLL LG ++Y NPFD+ME ISL GKTNFF+KR +Y
Sbjct: 246 VNLIGMNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRESQY 305
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA V GN F+ID DF
Sbjct: 306 QKAFV----GIENGNDSFRIDVDF 325
>gi|255711354|ref|XP_002551960.1| KLTH0B03938p [Lachancea thermotolerans]
gi|238933338|emb|CAR21522.1| KLTH0B03938p [Lachancea thermotolerans CBS 6340]
Length = 403
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/327 (62%), Positives = 247/327 (75%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL N RF +FPI+Y +IW+ YK+AEASFWTAEE+DLS+DL W + +E+ F+
Sbjct: 77 EEPLLMENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNNRMNENERFFI 136
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ V+AFFAASDGIV ENL F EVQ EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 137 SRVIAFFAASDGIVNENLVENFSAEVQSPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 196
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AIET+P + +KA WA+ WI D FAERL+AFA VEG+FFSGSF AIFWLK
Sbjct: 197 KESDFLFNAIETIPQIKEKAEWAIRWIQDEDALFAERLVAFAAVEGVFFSGSFAAIFWLK 256
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ L+ K ++ ++ EAVEIE+ + DA
Sbjct: 257 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIIERIITEAVEIEQRYFRDA 316
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM+QY+EFVADRLL ALG K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 317 LPVSLLGMNADLMNQYVEFVADRLLVALGNQKFYNVTNPFDFMENISLAGKTNFFEKRVS 376
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VM+ S F DEDF
Sbjct: 377 DYQKAGVMAKSTKAETEGGEFAFDEDF 403
>gi|367014807|ref|XP_003681903.1| hypothetical protein TDEL_0E04490 [Torulaspora delbrueckii]
gi|359749564|emb|CCE92692.1| hypothetical protein TDEL_0E04490 [Torulaspora delbrueckii]
Length = 399
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/327 (61%), Positives = 247/327 (75%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL N RF +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 73 DEPLLVENKRRFVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 132
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQ+ EA+ FYGFQI +ENIHSE YSLL++TYIKD
Sbjct: 133 SRVLAFFAASDGIVNENLVENFSAEVQIPEAKCFYGFQIMMENIHSETYSLLIDTYIKDP 192
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AIE +P + +KA WA+ WI SE+ FAERL+AFA +EG FFSGSF AIFWLK
Sbjct: 193 KESDFLFNAIENIPQIKEKAEWAIRWIQDSESIFAERLVAFAAIEGYFFSGSFAAIFWLK 252
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
K+GLMPGLTFSNELI RDEGLH DFACLL++ L+ K ++ ++ EAVEIE+ + DA
Sbjct: 253 KKGLMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPSIIEKIITEAVEIEKRYFIDA 312
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM+QY+EFVADRLL A G K + V NPFD+ME ISL GKTNFFEKRV
Sbjct: 313 LPVSLLGMNADLMNQYVEFVADRLLVAFGNKKFFNVTNPFDFMENISLAGKTNFFEKRVS 372
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VM+ S F DEDF
Sbjct: 373 DYQKAGVMAKSSKEESETGAFTFDEDF 399
>gi|443242947|ref|YP_007376172.1| ribonucleoside-diphosphate reductase small chain [Nonlabens
dokdonensis DSW-6]
gi|442800346|gb|AGC76151.1| ribonucleoside-diphosphate reductase small chain [Nonlabens
dokdonensis DSW-6]
Length = 330
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/327 (60%), Positives = 254/327 (77%), Gaps = 4/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EP+L NP+RF +FPIQ+ +WE YKK +A WTAEE+DL DL W+ +L +DE++F+
Sbjct: 5 QEPILQENPNRFVIFPIQHDDLWEWYKKQQACIWTAEEIDLQVDLTDWQNSLNSDERYFI 64
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 KHILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDD 124
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK++LF AIE P + KA WA+ WI+ S +FAERLIAFA VEGIFFSG+FC+I+WLKK
Sbjct: 125 KEKDQLFKAIENFPAIKLKADWAMKWIE-SPSFAERLIAFAAVEGIFFSGAFCSIYWLKK 183
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDA 243
RGLMPGLTFSNELISRDEG+HCDFA L++ L K+ +ER+ ++ +A+ IEREF+ ++
Sbjct: 184 RGLMPGLTFSNELISRDEGMHCDFAVHLHNHHLVNKVPKERITEIIVDALNIEREFITES 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM+QY+EFV DRLL L +Y V NPFD+M+LI ++GKTNFFEKRVG
Sbjct: 244 LPASLIGMNAKLMTQYLEFVTDRLLVELECDPVYNVTNPFDFMDLIGMEGKTNFFEKRVG 303
Query: 304 EYQKASVMSSLNGNGGN-HVFKIDEDF 329
EYQKA VM+S + F +D DF
Sbjct: 304 EYQKAGVMNSTKEDKSTMDSFSLDADF 330
>gi|207343947|gb|EDZ71248.1| YJL026Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 399
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/327 (62%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASD IV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDSIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S N G F +EDF
Sbjct: 375 DYQKAGVMSKSTNQEAG--AFTFNEDF 399
>gi|120437796|ref|YP_863482.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
KT0803]
gi|117579946|emb|CAL68415.1| ribonucleoside-diphosphate reductase small chain [Gramella forsetii
KT0803]
Length = 325
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 200/325 (61%), Positives = 255/325 (78%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI++ IW+ YKK EA FWTAEE+DL +DL W L+ADE++F+
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWDWYKKMEACFWTAEEIDLHEDLSDWNNKLSADERYFLK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+K+
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKNEK 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF AIE P + KKA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDQLFKAIEVFPAIKKKADWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ L ++ +E+++ ++ +A+ IEREFV ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNQHLVNQVPKEKIREILIDALNIEREFVTESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL L K Y V+NPFD+M++I+LQGKTNFFEKRV E
Sbjct: 244 PVSLIGMNAKLMTQYLEFVTDRLLVELDCEKEYNVSNPFDFMDMINLQGKTNFFEKRVSE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N + + D DF
Sbjct: 304 YQKAGVM---NKDKESDEISFDADF 325
>gi|6322434|ref|NP_012508.1| Rnr2p [Saccharomyces cerevisiae S288c]
gi|1172946|sp|P09938.2|RIR2_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 1;
AltName: Full=Ribonucleotide reductase R2 subunit 1;
AltName: Full=Ribonucleotide reductase small subunit 1
gi|52695523|pdb|1SMQ|A Chain A, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695524|pdb|1SMQ|B Chain B, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695525|pdb|1SMQ|C Chain C, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|52695526|pdb|1SMQ|D Chain D, Structure Of The Ribonucleotide Reductase Rnr2 Homodimer
From Saccharomyces Cerevisiae
gi|172450|gb|AAA34988.1| ribonucleoside diphosphate reductase small subunit [Saccharomyces
cerevisiae]
gi|1008142|emb|CAA89317.1| RNR2 [Saccharomyces cerevisiae]
gi|285812874|tpg|DAA08772.1| TPA: Rnr2p [Saccharomyces cerevisiae S288c]
gi|392298407|gb|EIW09504.1| Rnr2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 399
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/327 (62%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S G F +EDF
Sbjct: 375 DYQKAGVMSKSTKQEAG--AFTFNEDF 399
>gi|22595713|gb|AAN02745.1| ribonucleotide reductase small subunit [lumpy skin disease virus]
Length = 321
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 203/324 (62%), Positives = 248/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L RF +FPI Y +IW MYKKA ASFWT +EVDLS+DL W+ L +E++F+ +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ +EAR FYGFQIA+ENIHSEMYSLL++TYI + E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+AIET+ + KK+ WA WI + +F ERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S + + ++ EAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIITIIINEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIEF+ADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCVLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|340617898|ref|YP_004736351.1| ribonucleoside-diphosphate reductase, small subunit [Zobellia
galactanivorans]
gi|339732695|emb|CAZ95963.1| Ribonucleoside-diphosphate reductase, small subunit [Zobellia
galactanivorans]
Length = 328
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/325 (61%), Positives = 252/325 (77%), Gaps = 4/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI++ +WE YKK EA FWTAEE+DL +D W+ L+ DE++F+
Sbjct: 6 EPILEENNDRFVIFPIKHHDLWEWYKKCEACFWTAEEIDLHEDQNDWDNKLSEDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F++EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 66 HILAFFAASDGIVNENLAENFVSEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF AIE P + KKA WALNWI+ S +FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 126 EKALLFRAIENFPAIKKKADWALNWIE-SPSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCD+A L++ L K+ +ER+ ++ +A++IEREF+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHCDYAVHLHNKHLVNKVPKERITQILTDALDIEREFITESL 244
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL L K+Y NPFD+M++ISLQGKTNFFEKRV E
Sbjct: 245 PASLIGMNSKLMTQYLEFVTDRLLVELECDKVYNATNPFDFMDMISLQGKTNFFEKRVSE 304
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V++ + + D DF
Sbjct: 305 YQKAGVLNKEKDDDAQKI-SFDADF 328
>gi|367002221|ref|XP_003685845.1| hypothetical protein TPHA_0E03210 [Tetrapisispora phaffii CBS 4417]
gi|357524144|emb|CCE63411.1| hypothetical protein TPHA_0E03210 [Tetrapisispora phaffii CBS 4417]
Length = 401
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 198/325 (60%), Positives = 247/325 (76%), Gaps = 2/325 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL + R ++PI+YP ++E YK+AEASFWTAEE+DL +DL W + +EK F++
Sbjct: 77 EPLLVEDDSRKVLYPIKYPDVYEAYKRAEASFWTAEEIDLGKDLHDWNNRMNENEKFFIS 136
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F E ++ EA+ FYGFQI IENIHSE YSLL++TY+KD
Sbjct: 137 RVLAFFAASDGIVNENLTENFSVEAKIPEAKLFYGFQIMIENIHSETYSLLIDTYVKDPK 196
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF+AIET+P + +KA WAL WI+ SE FAERL+AFA +EG+FFSGSF +IFWLKK
Sbjct: 197 ESQFLFNAIETIPQIKEKAEWALRWINDSEALFAERLVAFAAIEGVFFSGSFASIFWLKK 256
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFAC+L+S ++ K S E V+ +V EAVEIE+ + DAL
Sbjct: 257 RGLMPGLTFSNELICRDEGLHTDFACILFSHIKNKPSPEIVEKIVTEAVEIEKRYFLDAL 316
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFVADRLL A G K + V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 317 PVSLLGMNADLMNQYVEFVADRLLVAFGNKKYFKVENPFDFMENISLAGKTNFFEKRVSD 376
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ A V+S + + F ++EDF
Sbjct: 377 YQFAGVISKSSNTESENPFSLEEDF 401
>gi|300706309|ref|XP_002995432.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
gi|239604534|gb|EEQ81761.1| hypothetical protein NCER_101672 [Nosema ceranae BRL01]
Length = 325
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/324 (62%), Positives = 242/324 (74%), Gaps = 7/324 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL PN +R+ +FPI+Y IW+MYKKAE+SFWT EEVDL+ D W +L E++F+++
Sbjct: 8 EPLLNPNEERYVLFPIKYHDIWQMYKKAESSFWTVEEVDLTADRNDWLSLNDKERYFISN 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV NL RF EV + EA+ FYGFQ+AIENIHSEMYSLL++ YI D DE
Sbjct: 68 ILAFFAASDGIVNANLVERFANEVTILEAKCFYGFQVAIENIHSEMYSLLIDAYITDQDE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+AI T+PC+ KKA WAL WI D +FA R+IAFACVEGIFFSG+F +IFWLK R
Sbjct: 128 KTHLFNAISTIPCIKKKADWALKWIKDEKSSFATRVIAFACVEGIFFSGAFASIFWLKNR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLL L K + +VKEAVEIE+EF+ +LP
Sbjct: 188 GLMPGLTFSNELISRDEGLHCDFACLLNQYLINK--SPHILDIVKEAVEIEKEFLGVSLP 245
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL LG K Y NPFD+ME ISL GKTNFF+KR +Y
Sbjct: 246 VNLIGMNCKLMCQYIEFVADRLLINLGLEKYYNTLNPFDFMENISLVGKTNFFDKRESQY 305
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA V GN F +D +F
Sbjct: 306 QKAFV----GIENGNDTFSLDAEF 325
>gi|389741966|gb|EIM83154.1| ribonucleotide reductase subunit R2 [Stereum hirsutum FP-91666 SS1]
Length = 341
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 248/328 (75%), Gaps = 13/328 (3%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEK 61
SI +E +L PNP RF +FPI YP +W+MY++A ASFWT E+++ D+R W EALTA+E+
Sbjct: 7 SITQEIVLTPNPGRFVLFPIVYPDLWDMYQRALASFWTTSEINMVHDIRQWTEALTANER 66
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV+ENL RF +EVQ+AEARAFY Q +E IHSE Y++L++ I
Sbjct: 67 HFISHVLAFFAASDGIVVENLVSRFASEVQLAEARAFYASQAMMETIHSETYAMLIDVLI 126
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ RLF+A+E++PCV +KATWA+ WI D +F RLIAFA VEG+FFSGSF +IF
Sbjct: 127 KDMGERERLFNAMESIPCVKEKATWAVKWIADAEASFPIRLIAFAVVEGVFFSGSFASIF 186
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLH DFAC+L+ ++ K V + +EAV IE+ FV
Sbjct: 187 WLKKRGLMPGLTFSNELISRDEGLHTDFACMLFGYIQNKPLPAVVVQIFREAVLIEQRFV 246
Query: 241 C-----------DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELI 289
DALP L+GMN E M +YIEF+ADRLL ALGY K+Y V NPFD+M++I
Sbjct: 247 TGADGFILVFLLDALPVKLIGMNAENMCKYIEFIADRLLQALGYDKIYSVGNPFDFMDII 306
Query: 290 SLQGKTNFFEKRVGEYQKASVMSSLNGN 317
SL+GKTNFFEKRV +Y K SV S+ +
Sbjct: 307 SLEGKTNFFEKRVSDYAKFSVASNATSD 334
>gi|15826569|pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
Length = 419
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/327 (62%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 95 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 154
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 155 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 214
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 215 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 274
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 275 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 334
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 335 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 394
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S G F +EDF
Sbjct: 395 DYQKAGVMSKSTKQEAG--AFTFNEDF 419
>gi|15150459|ref|NP_150454.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
virus NI-2490]
gi|15149031|gb|AAK84981.1| LSDV020 ribonucleotide reductase small subunit [Lumpy skin disease
virus NI-2490]
gi|22595554|gb|AAN02587.1| ribonucleotide reductase small subunit [Lumpy skin disease virus
NW-LW]
Length = 321
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/324 (62%), Positives = 250/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L RF +FPI Y +IW MYKKA ASFWT +EVDLS+DL W+ L+ +E++F+ +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLSNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ +EAR FYGFQIA+ENIHSEMYSLL++TYI + E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+AIET+ + KK+ WA WI + +F ERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFSGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S E + ++ EAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNEIITIIINEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LMSQYIEF+ADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCDLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|403214437|emb|CCK68938.1| hypothetical protein KNAG_0B05040 [Kazachstania naganishii CBS
8797]
Length = 395
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/326 (61%), Positives = 247/326 (75%), Gaps = 3/326 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
EEP++ + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+DL W + +EK F+
Sbjct: 71 EEPIMVGDKNRHTVFPIKYHEIWQAYKRAEASFWTAEEIDLSKDLHDWNVRMNPNEKFFI 130
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDG+V ENL F EV + EA+AFYGFQI IENIHSE YSLL++TYIKD
Sbjct: 131 SRVLAFFAASDGLVNENLVENFSAEVNIPEAKAFYGFQIMIENIHSETYSLLIDTYIKDP 190
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AIET+P + +KA WAL WI SE+ FAERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 191 KESEFLFNAIETIPQIKEKAEWALRWIGDSESVFAERLVAFAAIEGVFFSGSFASIFWLK 250
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 251 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLKHKPDPSVVERIVTEAVEIEKRYFLDA 310
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K + V NPFD+ME ISL GKTNFFEKRV
Sbjct: 311 LPVALLGMNADLMNQYVEFVADRLLVAFGNEKYFKVENPFDFMENISLAGKTNFFEKRVS 370
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ F + EDF
Sbjct: 371 DYQKAGVMAQATKEETG-AFNLQEDF 395
>gi|227541|prf||1706181A ribonucleotide reductase
Length = 290
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/294 (68%), Positives = 238/294 (80%), Gaps = 5/294 (1%)
Query: 37 SFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEAR 96
SFWTAEEVDLS+D++HWE+L +E++F++HVLAFFAASDGIV ENL RF EVQ+ EAR
Sbjct: 1 SFWTAEEVDLSKDIQHWESLKPEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEAR 60
Query: 97 AFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSE 155
FYGFQIA+ENIHSEMYSLL++TYIKD E+ LF+AIET+PCV KKA WAL WI D
Sbjct: 61 CFYGFQIAMENIHSEMYSLLIDTYIKDPKEREFLFNAIETMPCVKKKADWALRWIGDKEA 120
Query: 156 TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 215
T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++
Sbjct: 121 TYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKH 180
Query: 216 LRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGK 275
L K SEERV+ ++ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+ LG+ K
Sbjct: 181 LVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSK 240
Query: 276 LYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
++ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D DF
Sbjct: 241 VFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDADF 290
>gi|393911948|gb|EFO23522.2| ribonucleoside-diphosphate reductase [Loa loa]
Length = 365
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 247/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LLA NP+RF +FPI++ IW+ YKKA ASFWT +EVDLS+D R WE L E+HF++
Sbjct: 46 EILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISR 105
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYS +++TYI+D +
Sbjct: 106 VLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENVHSEMYSKMIDTYIRDQKQ 165
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF+AI V KKA WAL WI D +AERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 166 KSLLFNAIYEFEFVKKKADWALCWIADIKAPYAERLIAFAAVEGIFFSGSFAAIFWLKKR 225
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLY+ ++ K SEER+ +++EAV+IE+E++ +ALP
Sbjct: 226 GLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEERIYQIIREAVDIEKEYLTEALP 285
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N +LM QYIE+VAD LL L K+Y NPFD+ME IS++ KTNFFEKRV EY
Sbjct: 286 VDLIGINCKLMCQYIEYVADHLLTELHCAKMYYSDNPFDFMERISIEAKTNFFEKRVSEY 345
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA V+ S G FK+D DF
Sbjct: 346 QKAGVLCSEEGKS----FKLDSDF 365
>gi|156839886|ref|XP_001643629.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
70294]
gi|156114248|gb|EDO15771.1| hypothetical protein Kpol_478p6 [Vanderwaltozyma polyspora DSM
70294]
Length = 394
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 248/326 (76%), Gaps = 3/326 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EPLL + +R M PI+YP I+E YKKAEASFWTAEE+DLS+DL W + L ++E+ F++
Sbjct: 69 EPLLNEDKNRLIMHPIRYPDIYEAYKKAEASFWTAEEIDLSKDLSDWNDKLNSNERFFIS 128
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F EV+V EAR FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 129 RVLAFFAASDGIVNENLTENFSVEVKVPEARCFYGFQIMIENIHSETYSLLIDTYIKDPK 188
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AI+ +P + +KA WAL WI+ E F ERL+AFA +EG+FFSGSF +IFWLKK
Sbjct: 189 ESDFLFNAIDYIPQIKEKAEWALRWINNDEALFGERLVAFASIEGVFFSGSFASIFWLKK 248
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFA LL+S L K V+ +V EAVEIE+ + DAL
Sbjct: 249 RGLMPGLTFSNELICRDEGLHTDFASLLFSHLDNKPDPAIVEKIVTEAVEIEKRYFIDAL 308
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM+QY+EFVADRLL + G K Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 309 PVALLGMNAKLMNQYVEFVADRLLVSFGNEKYYKVENPFDFMENISLAGKTNFFEKRVSD 368
Query: 305 YQKASVMSSLNGNG-GNHVFKIDEDF 329
YQKASV++ + N + F ++E+F
Sbjct: 369 YQKASVIAKSSENKVDDETFAVNEEF 394
>gi|321263951|ref|XP_003196693.1| ribonucleotide reductase small subunit [Cryptococcus gattii WM276]
gi|317463170|gb|ADV24906.1| Ribonucleotide reductase small subunit, putative [Cryptococcus
gattii WM276]
Length = 430
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/329 (59%), Positives = 243/329 (73%), Gaps = 8/329 (2%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHV 67
+L + RF +FPI+Y +IW+ YK+A+ASFWTAEE+D DL W + +T E+ F+ +
Sbjct: 102 ILRESDSRFVLFPIKYNEIWQAYKRAQASFWTAEELDFGHDLIDWHDRMTEQERFFILRI 161
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
LAFFAASDGIV EN+ +F EVQ+AEARAFY FQ IE +HSE YSLL+ETY++D+ EK
Sbjct: 162 LAFFAASDGIVGENIVSQFSLEVQIAEARAFYSFQSMIEQVHSETYSLLIETYVRDAQEK 221
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
+ LF +E +PC+ +KA WAL +I F RL+AFACVEGIFFSGSF AIFWLKKRGL
Sbjct: 222 DFLFRGMENIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIFWLKKRGL 281
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
MPGLTFSNELISRDEG+H DFACLLY+ L+ + S + V +V EA+ IE++F+ DALPCA
Sbjct: 282 MPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHRIVSEALVIEKQFLTDALPCA 341
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+G+N LM QY+EFVADRL+ LGY K+Y NPFDWMELISLQGK NFFE RV YQK
Sbjct: 342 LIGINAHLMCQYMEFVADRLVVDLGYPKIYNATNPFDWMELISLQGKANFFESRVSAYQK 401
Query: 308 ASVMSSLNGNG-------GNHVFKIDEDF 329
A+V + +G VF+ D DF
Sbjct: 402 ANVSRTATPSGQKEDERLTRRVFRTDADF 430
>gi|345110753|pdb|3OLJ|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110754|pdb|3OLJ|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110755|pdb|3OLJ|C Chain C, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
gi|345110756|pdb|3OLJ|D Chain D, Crystal Structure Of Human Ribonucleotide Reductase
Subunit M2 (Hrrm2)
Length = 286
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/284 (68%), Positives = 234/284 (82%), Gaps = 1/284 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E++F
Sbjct: 3 VEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYF 62
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKD
Sbjct: 63 ISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKD 122
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFWL
Sbjct: 123 PKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWL 182
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+ +
Sbjct: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTE 242
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWM 286
ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+M
Sbjct: 243 ALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFM 286
>gi|402589750|gb|EJW83681.1| ribonucleoside-diphosphate reductase [Wuchereria bancrofti]
Length = 365
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 247/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LLA NP+RF +FPI++ IW YKKA ASFWT +EVDLS+D R WE L E+HF++
Sbjct: 46 EILLAENPNRFVIFPIKFHDIWGFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISR 105
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQI IENIHSEMYS +++TYI+D +
Sbjct: 106 VLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENIHSEMYSKMIDTYIRDQKQ 165
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF+AI V KKA WAL WI D + ++AERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 166 KSLLFNAIYEFEFVKKKADWALCWIADINASYAERLIAFAAVEGIFFSGSFAAIFWLKKR 225
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLY+ ++ K SE R+ +++EAV+IE+E++ +ALP
Sbjct: 226 GLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEGRIYQIIREAVDIEKEYLTEALP 285
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N +LM QYIE+VAD LL L K+Y NPFD+ME IS++ KTNFFEKRV EY
Sbjct: 286 VDLIGINCKLMCQYIEYVADHLLTELHCAKIYHSDNPFDFMERISIEAKTNFFEKRVSEY 345
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA V+S G FK+D DF
Sbjct: 346 QKAGVLSGEEGKS----FKLDSDF 365
>gi|13876672|gb|AAK43560.1| ribonucleoside reductase [lumpy skin disease virus]
Length = 321
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/324 (62%), Positives = 247/324 (76%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L RF +FPI Y +IW MYKKA ASFWT +EVDLS+DL W+ L +E++F+ +
Sbjct: 2 EPILKETSSRFVVFPILYKEIWVMYKKAVASFWTVDEVDLSKDLADWKKLNNEEQYFIKN 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ +EAR FYGFQIA+ENIHSEMYSLL++TYI + E
Sbjct: 62 ILAFFAASDGIVNENLAERFYSEVQWSEARCFYGFQIAMENIHSEMYSLLIDTYISSTKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+AIET+ + KK+ WA WI + +F ERLIAFA VEGIFF GSF AIFWLKKR
Sbjct: 122 KEHLFNAIETMDFIKKKSEWARKWISNKKASFGERLIAFAAVEGIFFCGSFAAIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L+ S + + ++ EAV IE+EF+ + +P
Sbjct: 182 GLMPGLTFSNELISRDEGLHCDFACLIFKHLKYPPSNDIITIIINEAVSIEKEFLTNIIP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LMSQYIEF+ADRLL LG K++ NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 242 VKLIGMNCVLMSQYIEFIADRLLLELGCDKVFMSTNPFDFMENISLEGKTNFFEKRVSEY 301
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK V+S N ++VF +D DF
Sbjct: 302 QKMGVIS----NKDDNVFSLDVDF 321
>gi|356980108|gb|AET43587.1| ribonucleotide reductase [Micromonas pusilla virus PL1]
Length = 389
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 195/308 (63%), Positives = 237/308 (76%), Gaps = 1/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA DRF +FP++YP++WE+YKKA+ S WTAEEVDLS D+ W+ L +EK F+ +
Sbjct: 74 EPILASTLDRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSSDMEDWKNLNDNEKKFIKY 133
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKDS E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDSTE 193
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF AI+TVPC+ KKA WAL W D S TFAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 194 KKHLFEAIQTVPCIQKKANWALKWFDTKSRTFAERLFAFACVEGIFFSGSFCAIYWLKKR 253
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LLR K S E + ++V+EAVEIE+ F+ DALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTEVIHSIVREAVEIEKGFILDALP 313
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN E MS+YIE+V+DRLL +G L+G NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 CNLIGMNSEKMSEYIEYVSDRLLKQIGQPTLWGSKNPFDFMENISLDGKTNFFEKRVGDY 373
Query: 306 QKASVMSS 313
K +S
Sbjct: 374 GKMDDISD 381
>gi|343428030|emb|CBQ71554.1| probable small subunit of ribonucleotide reductase [Sporisorium
reilianum SRZ2]
Length = 425
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/321 (61%), Positives = 248/321 (77%), Gaps = 7/321 (2%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
RF +FPI++ +IW+MYKKAEASFWTAEE+DLS+DL W+ L +E+HF++HVLAFFAAS
Sbjct: 105 RFVLFPIRFNEIWQMYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAAS 164
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
DGIV ENL RF +EVQ AEAR FYGFQI +ENIHSE YSLL++TYI++ +++ LF A+
Sbjct: 165 DGIVNENLVERFSSEVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQREFLFDAV 224
Query: 135 ETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
ET+P V +KA WAL WI D TFAERL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTF
Sbjct: 225 ETIPVVKQKADWALRWISDKRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTF 284
Query: 194 SNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
SNELISRDEGLH DFACLL+S L+ + + V ++ EAV+IE EF+ A+P A++GM+
Sbjct: 285 SNELISRDEGLHTDFACLLFSHLKKRAHPDTVLKIITEAVDIEIEFLTTAIPVAMIGMSV 344
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSS 313
+ M+QYI++VADRLL +LG Y + P+ WME ISL+GKTNFFEK+V EY KA V
Sbjct: 345 KSMTQYIKYVADRLLVSLGNPGFYSESCPYSWMENISLEGKTNFFEKKVAEYAKAGVARR 404
Query: 314 LNGNG-----GNHVFKIDEDF 329
N +G H F ++EDF
Sbjct: 405 DNDDGDGTQKNTHAFSLEEDF 425
>gi|386783699|gb|AFJ24744.1| ribonucleoside diphosphate reductase subunit M2-2 [Schmidtea
mediterranea]
Length = 321
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 196/305 (64%), Positives = 236/305 (77%), Gaps = 1/305 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL + R IQY IWEM+ KA +SFWT EV+LS+D HW+ + DE++F+TH
Sbjct: 2 EILLTEDKSRIGFLNIQYEDIWEMFNKARSSFWTVNEVNLSKDFAHWKKMNDDERYFITH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF+ EV++ EA AFY FQIAIENIHSEMYSLL+++Y+ D++
Sbjct: 62 VLAFFAASDGIVNENLVERFIQEVKIPEAEAFYSFQIAIENIHSEMYSLLIDSYVTDTET 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN+LF+AIET+PCV KKA WAL WI D TF R++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 122 KNKLFNAIETMPCVQKKAQWALRWISDKKSTFGTRVVAFAAVEGIFFSGSFASIFWLKKR 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLHCDFACL++ L +K S E+V L+KEAV IE+EF+ DALP
Sbjct: 182 GLMPGLCFSNELISRDEGLHCDFACLMFKYLSSKPSPEQVLDLIKEAVGIEKEFLTDALP 241
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
+L+GMN E M +YIEFVADRLL LG K + NP D+M+ I + GKTNFFEKRVGEY
Sbjct: 242 VSLIGMNAESMCEYIEFVADRLLVELGCDKFWNTENPLDFMDNICIDGKTNFFEKRVGEY 301
Query: 306 QKASV 310
+SV
Sbjct: 302 SMSSV 306
>gi|378706263|gb|AFC35064.1| hypothetical protein OtV6_156c [Ostreococcus tauri virus RT-2011]
Length = 388
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/310 (61%), Positives = 238/310 (76%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAP +RF +FP++YP++WE+YKKA+ S WTAEEVDLS+D+ W+ L +E+ F+ +
Sbjct: 74 EPILAPTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNDNEQKFIKY 133
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKDS E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDSTE 193
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF AI+TVPC+ KKA WA+ W D S FAERL AFACVEGIFFSGSFCAI+WLKKRG
Sbjct: 194 KKQLFEAIQTVPCIEKKAQWAMKWFDKSRPFAERLFAFACVEGIFFSGSFCAIYWLKKRG 253
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGL FSNELISRDEGLH +FA L+ L+R K E + ++VKEAVEIE+ F+ DALPC
Sbjct: 254 LMPGLCFSNELISRDEGLHQEFAVELFKLMRNKPKTETIHSIVKEAVEIEKGFILDALPC 313
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
AL+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 ALIGMNSEKMSEYIEYVSDRLLKQIGQPPIWNSKNPFDFMENISLDGKTNFFEKRVGDYG 373
Query: 307 KASVMSSLNG 316
K S G
Sbjct: 374 KMDDTSDEIG 383
>gi|319953269|ref|YP_004164536.1| ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
14237]
gi|319421929|gb|ADV49038.1| Ribonucleoside-diphosphate reductase [Cellulophaga algicola DSM
14237]
Length = 326
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/325 (60%), Positives = 247/325 (76%), Gaps = 5/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPIQ+ +WE YKK EA WTAEE+DLS+D W L DE++F+
Sbjct: 5 EPILQENKDRFVIFPIQHNDLWEWYKKQEACIWTAEEIDLSEDANDWNNKLNDDERYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ +EA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYSEAKFFYGFQIMMENIHSETYSLLIDTYVKDEK 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK LF AIE P + KKA WAL WID S +FAERLIAFA VEGIFFSGSFC+IFWLKKR
Sbjct: 125 EKTVLFQAIENFPAIKKKADWALKWID-SPSFAERLIAFAAVEGIFFSGSFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+HCDFA L++ + ++ +ER+ ++ +A+ IEREF+ ++L
Sbjct: 184 GLMPGLTFSNELISRDEGMHCDFAVHLHNKHIINQVPKERITEILVDALNIEREFITESL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL L K+Y NPFD+M++I ++GKTNFFEKRV E
Sbjct: 244 PASLIGMNSKLMTQYLEFVTDRLLVELECDKVYNSTNPFDFMDMIGMEGKTNFFEKRVSE 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V++S G+ D DF
Sbjct: 304 YQKAGVLNS--DKEGDSKISFDADF 326
>gi|67585619|ref|XP_665115.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis TU502]
gi|54655552|gb|EAL34885.1| ribonucleotide reductase R2 subunit [Cryptosporidium hominis]
Length = 296
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 194/300 (64%), Positives = 230/300 (76%), Gaps = 4/300 (1%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFW EE+DLSQD R WE+L E+HF+ +VLAFFAASDGIV+ENLA F+ E
Sbjct: 1 MYKKAEASFWVTEEIDLSQDTRDWESLKDPERHFIKYVLAFFAASDGIVMENLAVNFLRE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
+Q+ EAR +Y FQ++IE IHSE YSLL++ YI D E+ LF AI + V KKA WA
Sbjct: 61 IQIPEARMYYAFQMSIEQIHSETYSLLIDRYITDIKERQMLFEAISHIEAVKKKAEWATK 120
Query: 150 WIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 209
W++ +FAER+I F VEGI FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH DFA
Sbjct: 121 WMNSERSFAERIIGFCAVEGILFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHADFA 180
Query: 210 CLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLG 269
CL+Y L+ KL RV+ ++ EAVE+ER F+CD+LP L+GMN LM+QYIEFVADRLL
Sbjct: 181 CLIYKALKFKLPAPRVQQIISEAVEVERNFLCDSLPVDLIGMNSRLMAQYIEFVADRLLF 240
Query: 270 ALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
AL K+Y V+NPFDWM+LISLQGKTNFFEKRVGEYQ A VM N + F ++ DF
Sbjct: 241 ALDIPKIYNVSNPFDWMDLISLQGKTNFFEKRVGEYQMAGVMV----NQDDQKFDLNADF 296
>gi|68485781|ref|XP_713171.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
gi|68485874|ref|XP_713125.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
gi|46434604|gb|EAK94008.1| hypothetical protein CaO19.1868 [Candida albicans SC5314]
gi|46434651|gb|EAK94054.1| hypothetical protein CaO19.9424 [Candida albicans SC5314]
gi|238883648|gb|EEQ47286.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
albicans WO-1]
Length = 394
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/326 (60%), Positives = 248/326 (76%), Gaps = 5/326 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL P+ R ++PI+YP++W+ YKK+ ASFWTAEE+DLS+DL W + +E+ F++
Sbjct: 71 EPLLTPDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNKMNENERFFIS 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F EVQ+ EA++ Y FQI +ENIHSE YSLL+ETY KD +
Sbjct: 131 RVLAFFAASDGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIETYFKDPE 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AI+ +P + KKA WA+ WI + +AERL+AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EADFLFNAIDNIPFIRKKADWAIRWIQSEDALYAERLVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEG+H D+ACLL+S L+ K S E ++ ++ EAV+IE+E+ DAL
Sbjct: 251 RGLMPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSSEIIEKIITEAVDIEKEYFSDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 311 PVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVTNPFDFMENISLAGKTNFFEKRVSD 370
Query: 305 YQKASVMSSL-NGNGGNHVFKIDEDF 329
YQKA VM + N N +F D+DF
Sbjct: 371 YQKAGVMEKVENKNEKTGLF--DQDF 394
>gi|367007082|ref|XP_003688271.1| hypothetical protein TPHA_0N00560 [Tetrapisispora phaffii CBS 4417]
gi|357526579|emb|CCE65837.1| hypothetical protein TPHA_0N00560 [Tetrapisispora phaffii CBS 4417]
Length = 398
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/326 (61%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVT 65
EPLL + R + PI+YP I+E YK+AEASFWTAEE+DLS+DL W E + ++E+ F++
Sbjct: 73 EPLLNKDKKRHLVHPIKYPDIYETYKRAEASFWTAEEIDLSKDLYDWNERMNSNERFFIS 132
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F E+QV EAR FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 133 RVLAFFAASDGIVNENLTENFSVEIQVPEARYFYGFQIMIENIHSETYSLLIDTYIKDPK 192
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AI+ +P + +KA WAL WI+ E F ERL+AFA +EG+FFSGSF +IFWLKK
Sbjct: 193 ESSFLFNAIDYIPQIKEKAEWALRWINDDEALFGERLVAFASIEGVFFSGSFASIFWLKK 252
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFAC+L++ L+ K V+ +V EAV IE+ + DAL
Sbjct: 253 RGLMPGLTFSNELICRDEGLHTDFACILFAHLKNKPDPAIVEKIVTEAVGIEKRYFLDAL 312
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 313 PVALLGMNAKLMTQYVEFVADRLLVAFGNEKYYKVENPFDFMENISLAGKTNFFEKRVSD 372
Query: 305 YQKASVMS-SLNGNGGNHVFKIDEDF 329
YQKA V+S S N F ++E+F
Sbjct: 373 YQKAGVISKSSNTEADEGAFAMNENF 398
>gi|401826656|ref|XP_003887421.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
gi|395459939|gb|AFM98440.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
Length = 324
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 248/325 (76%), Gaps = 8/325 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL P +RF +FPI+Y IW++YKKAE+SFWT EEV L +D+ W L A EKHF++H
Sbjct: 6 EPLLNPEEERFVLFPIKYIDIWKLYKKAESSFWTVEEVTLDKDIEDWGKLNAGEKHFISH 65
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV NL RF EV++ EA+ FYGFQ+AIENIHSEMYSLL++TYIKD+ E
Sbjct: 66 VLAFFAASDGIVNLNLLERFSNEVKILEAKFFYGFQMAIENIHSEMYSLLIDTYIKDAAE 125
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF+AI+ +P V KA WA+ WI D +FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 126 KDFLFNAIKNIPSVGDKADWAIRWIEDKDSSFATRLVAFACVEGIFFSGAFASIFWLKKR 185
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHC+FAC L+ LR K + R K +V +AV IE++F+ ++L
Sbjct: 186 GLMPGLTFSNELISRDEGLHCEFACHLHRYHLRNKCT--RTKEIVMDAVRIEKDFLSNSL 243
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM +YIEFVAD LL LG K+Y ANPFD+ME ISL GKTNFF+KR +
Sbjct: 244 PVKLIGMNCDLMCKYIEFVADTLLENLGEEKIYHTANPFDFMENISLVGKTNFFDKRESQ 303
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V GN F+ID DF
Sbjct: 304 YQKAFV----GIENGNDSFRIDVDF 324
>gi|405119255|gb|AFR94028.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
var. grubii H99]
Length = 430
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/336 (58%), Positives = 244/336 (72%), Gaps = 8/336 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P EE +L + RF +FPI+Y +IW+ YK A+ASFWTAEE+D DL W + +T E
Sbjct: 95 PEEEEEDILRESDSRFVLFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQE 154
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F+ +LAFFAASDGIV EN+ +F EVQ+AEARAFY FQ IE +HSE YSLL+ETY
Sbjct: 155 RFFILRILAFFAASDGIVGENIVSQFSLEVQIAEARAFYSFQSMIEQVHSETYSLLIETY 214
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
++D+ EK+ LF + +PC+ +KA WAL +I F RL+AFACVEGIFFSGSF AIF
Sbjct: 215 VRDAQEKDFLFRGMANIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIF 274
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEG+H DFACLLY+ L+ + S + V +V EA+ IE++F+
Sbjct: 275 WLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHRIVSEALAIEKQFL 334
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALPCAL+G+N LM QY+EFVADRL+ LGY K+Y NPFDWMELISLQGK NFFE
Sbjct: 335 TDALPCALIGINAHLMCQYMEFVADRLVVDLGYPKIYNATNPFDWMELISLQGKANFFES 394
Query: 301 RVGEYQKASVMSSLNGNG-------GNHVFKIDEDF 329
RV YQKA+V + +G VF+ D DF
Sbjct: 395 RVSAYQKANVSRTGTPSGQKEDERLTRRVFRTDADF 430
>gi|58260834|ref|XP_567827.1| ribonucleotide reductase small subunit [Cryptococcus neoformans
var. neoformans JEC21]
gi|134117207|ref|XP_772830.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255448|gb|EAL18183.1| hypothetical protein CNBK2010 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229908|gb|AAW46310.1| ribonucleotide reductase small subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 430
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/336 (58%), Positives = 244/336 (72%), Gaps = 8/336 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P EE +L + RF +FPI+Y +IW+ YK A+ASFWTAEE+D DL W + +T E
Sbjct: 95 PEEEEEDILRESESRFVLFPIKYNEIWQAYKHAQASFWTAEELDFGHDLIDWHDRMTEQE 154
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F+ +LAFFAASDGIV EN+ +F EVQ+AEARAFY FQ IE +HSE YSLL+ETY
Sbjct: 155 RFFILRILAFFAASDGIVGENIVSQFALEVQIAEARAFYSFQSMIEQVHSETYSLLIETY 214
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
++D+ EK+ LF + +PC+ +KA WAL +I F RL+AFACVEGIFFSGSF AIF
Sbjct: 215 VRDAQEKDFLFRGMTNIPCIKQKADWALKYITDELPFRTRLVAFACVEGIFFSGSFAAIF 274
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEG+H DFACLLY+ L+ + S + V +V EA+ IE++F+
Sbjct: 275 WLKKRGLMPGLTFSNELISRDEGMHTDFACLLYNHLKHRCSTDEVHHIVSEALVIEKQFL 334
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALPCAL+G+N LM QY+EFVADRL+ LGY K+Y NPFDWMELISLQGK NFFE
Sbjct: 335 TDALPCALIGINAHLMCQYMEFVADRLVVDLGYPKIYNATNPFDWMELISLQGKANFFES 394
Query: 301 RVGEYQKASVMSSLNGNG-------GNHVFKIDEDF 329
RV YQKA+V + +G VF+ D DF
Sbjct: 395 RVSAYQKANVSRTGTPSGQKEDERLTRRVFRTDADF 430
>gi|84998662|ref|XP_954052.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
reductase small chain [Theileria annulata]
gi|65305050|emb|CAI73375.1| ribonucleotide reductase R2 subunit or ribonucleoside-diphosphate
reductase small chain, putative [Theileria annulata]
Length = 322
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 189/303 (62%), Positives = 230/303 (75%), Gaps = 14/303 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EE +L NP+R C+FPI YP WE YKKA+ASFWTAEE+D S D HW L DE+HF+T
Sbjct: 16 EEFILNRNPNRTCLFPIVYPDFWEWYKKAQASFWTAEEIDFSMDYNHWHKLNKDERHFIT 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIVLENLA +F+ +V++ EA++FY FQIA+ENIHSE YSLL+E Y+KD
Sbjct: 76 NVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVKDEA 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAE--------------RLIAFACVEGIF 171
EK RLF AIET+ V KA WA WI +FAE R++A+A VEGI
Sbjct: 136 EKRRLFMAIETIDAVKDKANWAKKWITDENSFAERIVSNFKNKLINYYRIVAYAAVEGIL 195
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKE 231
FSGSFCA+FWLKKRGLMPGLTFSNELI+RDEGLH DF C +Y L+ KL EE V+ ++KE
Sbjct: 196 FSGSFCALFWLKKRGLMPGLTFSNELIARDEGLHADFGCFIYHNLKHKLPEEAVQQIIKE 255
Query: 232 AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISL 291
AV +ER ++CD+LPC L+GMN +LM+QYIEFVADRLL +LG +Y V NPFDWM+LIS+
Sbjct: 256 AVVVERSYICDSLPCDLIGMNSQLMTQYIEFVADRLLQSLGVRPVYNVTNPFDWMQLISV 315
Query: 292 QGK 294
Q K
Sbjct: 316 QVK 318
>gi|346644878|ref|NP_001231111.1| ribonucleoside-diphosphate reductase subunit M2 isoform 2 [Bos
taurus]
gi|296482362|tpg|DAA24477.1| TPA: ribonucleotide reductase M2 polypeptide isoform 2 [Bos taurus]
Length = 341
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/290 (67%), Positives = 236/290 (81%), Gaps = 5/290 (1%)
Query: 41 AEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYG 100
+E VDLS+D++HWEAL ++E++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYG
Sbjct: 56 SEPVDLSKDIQHWEALKSEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYG 115
Query: 101 FQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAE 159
FQIA+ENIHSEMYSLL++TYIKDS E+ LF+AIET+PCV KKA WAL WI D + T+ E
Sbjct: 116 FQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGE 175
Query: 160 RLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK 219
R++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K
Sbjct: 176 RVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHK 235
Query: 220 LSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGV 279
SE+RVK ++ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+ LG+ K++ V
Sbjct: 236 PSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 295
Query: 280 ANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D DF
Sbjct: 296 ENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDADF 341
>gi|313844096|ref|YP_004061759.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
gi|312599481|gb|ADQ91503.1| hypothetical protein OlV1_126 [Ostreococcus lucimarinus virus OlV1]
Length = 408
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 241/324 (74%), Gaps = 9/324 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLLAP +RF +FP++YP +WE+YKKA+ S WTAEEVDLS+DL W+ L +EK F+ +
Sbjct: 93 EPLLAPTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 152
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ +EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 153 ILAFFAGSDGIVFENINNNFADEVQSSEARSFYAYQCHNEMVHGETYSKLIDKYIKDGAE 212
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF AI+TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 213 KKQLFEAIQTVPCIQKKADWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 272
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LLR K + E + ++VKEAVEIE+ F+ DALP
Sbjct: 273 GLMPGLCFSNELISRDEGLHQEFAVELFKLLRIKPTTETIHSIVKEAVEIEKGFILDALP 332
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 333 CALIGMNSEKMSEYIEYVSDRLLKQIGVPPIWNSKNPFDFMENISLDGKTNFFEKRVGDY 392
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
K S G DEDF
Sbjct: 393 GKMDDTSDEIG--------FDEDF 408
>gi|88682973|gb|AAI05512.1| RRM2 protein [Bos taurus]
Length = 338
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 197/290 (67%), Positives = 236/290 (81%), Gaps = 5/290 (1%)
Query: 41 AEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYG 100
+E VDLS+D++HWEAL ++E++F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYG
Sbjct: 53 SEPVDLSKDIQHWEALKSEERYFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYG 112
Query: 101 FQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAE 159
FQIA+ENIHSEMYSLL++TYIKDS E+ LF+AIET+PCV KKA WAL WI D + T+ E
Sbjct: 113 FQIAMENIHSEMYSLLIDTYIKDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGE 172
Query: 160 RLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK 219
R++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K
Sbjct: 173 RVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHK 232
Query: 220 LSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGV 279
SE+RVK ++ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+ LG+ K++ V
Sbjct: 233 PSEQRVKEIIVNAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRV 292
Query: 280 ANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D DF
Sbjct: 293 ENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDADF 338
>gi|429966031|gb|ELA48028.1| hypothetical protein VCUG_00451 [Vavraia culicis 'floridensis']
Length = 325
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/330 (61%), Positives = 242/330 (73%), Gaps = 6/330 (1%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M PEE LL +++ +FP+ +W+MYK+A +SFWT EEVDLS+D+ W L DE
Sbjct: 1 MSHQPEESLLTEPKNKYTLFPLTNQDVWQMYKQALSSFWTVEEVDLSKDIDDWNRLNGDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+++VLAFFAASDGIV ENL F EVQ+ EAR FYGFQI IEN+HSEMYSLL++TY
Sbjct: 61 RHFISYVLAFFAASDGIVNENLLENFSREVQLKEARCFYGFQIMIENVHSEMYSLLIDTY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD +EK+ LF+AI + V +KA W WI D FA R+IAFACVEG+FFSGSF +I
Sbjct: 121 IKDQEEKDFLFNAIANINTVKRKAEWCFKWINDKDSDFATRVIAFACVEGLFFSGSFASI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH FA L+ L + +E+V +VKEAVEIE EF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHYQFAVLMNKTLIGQCPKEKVLEIVKEAVEIEEEF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
V D+LP +L+GMN +LM QYIEFVAD +L LG G++Y V NPFD+ME ISL GKTNFFE
Sbjct: 241 VSDSLPVSLIGMNCKLMCQYIEFVADGILVDLGIGRVYNVTNPFDFMENISLFGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
KRV EYQK V G FK DEDF
Sbjct: 301 KRVAEYQKGYV-----GIENEQTFKTDEDF 325
>gi|313768358|ref|YP_004062038.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
gi|312599054|gb|ADQ91078.1| hypothetical protein MpV1_155c [Micromonas sp. RCC1109 virus MpV1]
Length = 388
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 195/323 (60%), Positives = 241/323 (74%), Gaps = 8/323 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA +RF +FP++YP++WE+YKKA+ S WTAEEVDLS+D+ W+ L +E+ F+ +
Sbjct: 74 EPILASTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNDNEQKFIKY 133
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQSHNEMVHGETYSKLIDKYIKDGAE 193
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF AI+TVPC+ +KA WAL W D S FAERL AFACVEGIFFSGSFCAIFWLKKRG
Sbjct: 194 KKQLFEAIQTVPCIERKANWALKWFDKSRPFAERLFAFACVEGIFFSGSFCAIFWLKKRG 253
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGL FSNELISRDEGLH +FA L+ LLR K S E + ++VKEAVEIE+ F+ DALPC
Sbjct: 254 LMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTETIHSIVKEAVEIEKNFILDALPC 313
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 NLIGMNSEKMSEYIEYVSDRLLKQVGQPPIWNSKNPFDFMENISLDGKTNFFEKRVGDYG 373
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K S+ G DEDF
Sbjct: 374 KLDDDSAEIG--------FDEDF 388
>gi|386783387|pdb|4DJN|A Chain A, Crystal Structure Of A Ribonucleotide Reductase M2 B
(Rnrr2) From Homo Sapiens At 2.20 A Resolution
gi|386783388|pdb|4DJN|B Chain B, Crystal Structure Of A Ribonucleotide Reductase M2 B
(Rnrr2) From Homo Sapiens At 2.20 A Resolution
Length = 311
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/292 (67%), Positives = 231/292 (79%), Gaps = 1/292 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+ YK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 20 EEPLLRKSSRRFVIFPIQYPDIWKXYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 79
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSE YSLL++TYI+D
Sbjct: 80 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEXYSLLIDTYIRDPK 139
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 140 KREFLFNAIETXPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 199
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGL PGLTFSNELISRDEGLHCDFACL + L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 200 RGLXPGLTFSNELISRDEGLHCDFACLXFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 259
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
P L+G N L QYIEFVADRLL LG+ K++ NPFD+ E ISL+GKTN
Sbjct: 260 PVGLIGXNCILXKQYIEFVADRLLVELGFSKVFQAENPFDFXENISLEGKTN 311
>gi|401881690|gb|EJT45980.1| ribonucleotide reductase small subunit [Trichosporon asahii var.
asahii CBS 2479]
gi|406697724|gb|EKD00978.1| ribonucleotide reductase small subunit [Trichosporon asahii var.
asahii CBS 8904]
Length = 455
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/338 (60%), Positives = 247/338 (73%), Gaps = 14/338 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADE 60
P EE +L DRF +FPI+Y IW YK+A+ASFWTAEE+DL++DL W E + E
Sbjct: 122 PEEEEEDILRETSDRFVLFPIKYRDIWLAYKQAQASFWTAEELDLAKDLYDWNERMNERE 181
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F+ +LAFFA+SDGIV ENL +F TEVQ+AEARAFY FQ IE +H+E YSLL+ETY
Sbjct: 182 RFFILRILAFFASSDGIVGENLISQFATEVQIAEARAFYAFQTMIEQVHAETYSLLIETY 241
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
++D DEK+ LF +E +PC+ KKA WA+ +I F RLIAFACVEGIFFSGSF AIF
Sbjct: 242 VQDKDEKDFLFKGMENIPCIQKKADWAMKYITDDVPFRIRLIAFACVEGIFFSGSFAAIF 301
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLM GLTFSNELISRDEGLH DFACLLYS L+ K S+E V +VKE+++IE+EF+
Sbjct: 302 WLKKRGLMGGLTFSNELISRDEGLHTDFACLLYSHLKHKCSQEEVHKIVKESLDIEKEFL 361
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALPCAL+G+N + Y+EFVADRL+ ALGY K+Y NPFDWMELISLQGK NFFE
Sbjct: 362 TDALPCALIGINAD----YMEFVADRLVVALGYEKIYHSTNPFDWMELISLQGKANFFES 417
Query: 301 RVGEYQKASVMSSL-------NGNGG--NHVFKIDEDF 329
RV YQ A++ S N + G VF+ D F
Sbjct: 418 RVSSYQIANMSGSTTPLFSRKNSDEGRDKRVFRTDAYF 455
>gi|269863618|ref|XP_002651286.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220064807|gb|EED42770.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 332
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/309 (63%), Positives = 239/309 (77%), Gaps = 2/309 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL R+ +FPIQYP+IWE YK E++FWT EEVD++ D H+ LT +E+ F+ +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I+D +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF+AIE +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 205
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + K + ++ +V+EAV IE+EF+ ++LP
Sbjct: 206 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 263
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN +LM QYIEFVADRLL ALG K+Y V+NPFD+ME ISLQGKTNFFE+R YQ
Sbjct: 264 SLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDFMENISLQGKTNFFERREANYQ 323
Query: 307 KASVMSSLN 315
K V ++N
Sbjct: 324 KGYVELTMN 332
>gi|392575953|gb|EIW69085.1| hypothetical protein TREMEDRAFT_31348 [Tremella mesenterica DSM
1558]
Length = 446
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/334 (59%), Positives = 241/334 (72%), Gaps = 20/334 (5%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAAS 74
RF +FPI+Y +IW+ YK ++ASFWTAEE+DL D+ W E LT +E+ F+ +LAFFAAS
Sbjct: 113 RFVLFPIRYREIWQAYKASQASFWTAEELDLVHDMHDWNERLTENERFFILRILAFFAAS 172
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
DGIV EN+ +F EVQ+AEARAFY FQ +E +HSE YSLL+ETY++D+ EK+ LF I
Sbjct: 173 DGIVGENIVEQFALEVQIAEARAFYSFQSMMEQVHSETYSLLIETYVRDTQEKDFLFRGI 232
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E +PC+ KKA WAL +I F RL+AFACVEGIFFSGSF AIFWLKKRGLMPGLTFS
Sbjct: 233 ENIPCIRKKADWALKYITPELPFRVRLVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFS 292
Query: 195 NELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGE 254
NELISRDEG H DFACLLY L + S E+V +V EAV IE+EF+ DALP L+G+N
Sbjct: 293 NELISRDEGTHTDFACLLYDHLHHRCSTEQVHDIVSEAVVIEKEFLVDALPSHLIGINAS 352
Query: 255 LMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKA------ 308
LM QYIEFVADRL+ +LG K+YG NPFDWMELISLQGK NFFE RV YQKA
Sbjct: 353 LMCQYIEFVADRLVESLGCPKIYGATNPFDWMELISLQGKANFFESRVSSYQKAGVSRSG 412
Query: 309 -------------SVMSSLNGNGGNHVFKIDEDF 329
+V +S + + + VF++D DF
Sbjct: 413 RPGTTTTSTGADGTVTTSDSTHMSDRVFRVDADF 446
>gi|314055235|ref|YP_004063573.1| ribonucleoside-diphosphate reductase small subunit-possible host
origin [Ostreococcus tauri virus 2]
gi|313575126|emb|CBI70139.1| ribonucleoside-diphosphate reductase small subunit-possible host
origin [Ostreococcus tauri virus 2]
Length = 408
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/324 (60%), Positives = 245/324 (75%), Gaps = 9/324 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAP +RF +FP++YPQ+WE+YKKA+ S WTAEEVDLS+DL W+ L +EK F+ +
Sbjct: 93 EPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 152
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 153 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDGSE 212
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF AI+TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 213 KKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 272
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LR + + E + A+VKEAVEIE+ F+ DALP
Sbjct: 273 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFILDALP 332
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 333 CNLIGMNSEKMSEYIEYVSDRLLKQVGVPPIWNAKNPFDFMENISLDGKTNFFEKRVGDY 392
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
K L+ + G+ F DE+F
Sbjct: 393 GK------LDDDAGDIGF--DEEF 408
>gi|388548908|gb|AFK66109.1| ribonucleotide reductase R2 [Ostreococcus lucimarinus virus OlV3]
Length = 358
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/324 (60%), Positives = 245/324 (75%), Gaps = 9/324 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAP +RF +FP++YPQ+WE+YKKA+ S WTAEEVDLS+DL W+ L +EK F+ +
Sbjct: 43 EPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 102
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 103 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDGSE 162
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF AI+TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 163 KKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 222
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LR + + E + A+VKEAVEIE+ F+ DALP
Sbjct: 223 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFILDALP 282
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 283 CNLIGMNSEKMSEYIEYVSDRLLKQVGVPPIWNAKNPFDFMENISLDGKTNFFEKRVGDY 342
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
K L+ + G+ F DE+F
Sbjct: 343 GK------LDDDAGDIGF--DEEF 358
>gi|71033209|ref|XP_766246.1| ribonucleotide-diphosphate reductase small subunit [Theileria parva
strain Muguga]
gi|68353203|gb|EAN33963.1| ribonucleotide-diphosphate reductase small subunit, putative
[Theileria parva]
Length = 308
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/297 (63%), Positives = 229/297 (77%), Gaps = 10/297 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EE LL NP+R +FPI YP+ WE YKKA+ASFWTAEE+D S D HW L DE+HF+T
Sbjct: 7 EEFLLNRNPNRTSLFPIVYPEFWEWYKKAQASFWTAEEIDFSMDYNHWHRLNKDERHFIT 66
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIVLENLA +F+ +V++ EA++FY FQIA+ENIHSE YSLL+E Y+KD
Sbjct: 67 NVLAFFAASDGIVLENLALKFLRDVKIPEAQSFYSFQIAVENIHSETYSLLIENYVKDEA 126
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RLF AIET+ V KA WA WI +FAER++A+A VEGI FSGSFCA+FWLKKR
Sbjct: 127 EKRRLFMAIETIDAVKDKANWAKKWITDENSFAERIVAYAAVEGILFSGSFCALFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELI+RDEGLH DF C +Y L+ KL EE V+ ++KEAV +ER ++CD+LP
Sbjct: 187 GLMPGLTFSNELIARDEGLHADFGCFIYHNLKHKLPEEAVQQIIKEAVVVERSYICDSLP 246
Query: 246 CALVGMNG----------ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ 292
C L+GMN ELM+QYIEFVADRLL ALG +Y V NPFDWM+LIS+Q
Sbjct: 247 CDLIGMNSRKKILTHCLIELMTQYIEFVADRLLQALGVRPVYNVTNPFDWMQLISVQ 303
>gi|323453718|gb|EGB09589.1| hypothetical protein AURANDRAFT_60022 [Aureococcus anophagefferens]
Length = 393
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/320 (61%), Positives = 239/320 (74%), Gaps = 5/320 (1%)
Query: 11 APNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAF 70
A + RF +FPI+ +W MYK+AEASFWTAEEVDL QD +HWE L E++F++ VLAF
Sbjct: 76 ARDSSRFTLFPIKDAGLWAMYKRAEASFWTAEEVDLGQDKQHWEQLDEGERYFLSRVLAF 135
Query: 71 FAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRL 130
FAASDGIVLENL RF EV + EAR FY FQ AIE +H EMYSLLLETY++D E+ L
Sbjct: 136 FAASDGIVLENLVERFAQEVTLPEARFFYAFQGAIEGVHQEMYSLLLETYVEDPGEREAL 195
Query: 131 FHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPG 190
A + +PCV KA WA+ W +A RL+AFA VEG+FFSGSFCAIFWL+KRG++PG
Sbjct: 196 TRAHDLMPCVKAKADWAMKWTASDAPYAARLLAFAAVEGVFFSGSFCAIFWLRKRGILPG 255
Query: 191 LTFSNELISRDEGLHCDFACLLYSLL--RTKLSEERVKALVKEAVEIEREFVCDALPCAL 248
L F+NELISRDEGLHCDFAC LYS L +LS+ A++ EAV+ E +FV DALP +L
Sbjct: 256 LGFANELISRDEGLHCDFACALYSRLPGHLRLSDAEATAIISEAVDTEVDFVTDALPVSL 315
Query: 249 VGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
VGMN +LM+ Y++FVADRLL +LG+ K+YG ANPFD+MELIS+QGKTNFFEKRV EYQKA
Sbjct: 316 VGMNAKLMTDYVKFVADRLLASLGHPKIYGAANPFDFMELISMQGKTNFFEKRVAEYQKA 375
Query: 309 SVMSSLNGNGGNHVFKIDED 328
+V + VF D D
Sbjct: 376 NVAGDAT---ADFVFDADAD 392
>gi|357541912|gb|AET84674.1| ribonucleotide reductase [Ostreococcus lucimarinus virus OlV4]
Length = 364
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/308 (62%), Positives = 237/308 (76%), Gaps = 1/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLLAP +RF +FP++YP++WE+YKKA+ S WTAEEVDLS+D+ W+ L +E+ F+ +
Sbjct: 49 EPLLAPTLNRFTVFPLKYPELWELYKKAQMSNWTAEEVDLSKDMDDWKTLNENEQKFIKY 108
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ +EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 109 ILAFFAGSDGIVFENINNNFADEVQSSEARSFYAYQCHNEMVHGETYSKLIDKYIKDGAE 168
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF AI+TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 169 KKQLFEAIQTVPCIQKKANWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 228
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LLR K + E + ++VKEAVEIE+ F+ DALP
Sbjct: 229 GLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPTTETIHSIVKEAVEIEKGFILDALP 288
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
CAL+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 289 CALIGMNSEKMSEYIEYVSDRLLKQIGVPPIWNSKNPFDFMENISLDGKTNFFEKRVGDY 348
Query: 306 QKASVMSS 313
K S
Sbjct: 349 GKMDDTSD 356
>gi|303389600|ref|XP_003073032.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
intestinalis ATCC 50506]
gi|303302176|gb|ADM11672.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
intestinalis ATCC 50506]
Length = 326
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/325 (61%), Positives = 249/325 (76%), Gaps = 8/325 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL P +RF +FPIQ+ +W MYKKAE+SFWT EEV L +D+ W+ L EKHF+++
Sbjct: 8 EPLLDPKEERFVLFPIQHEDVWRMYKKAESSFWTVEEVLLDKDIEDWKKLNPKEKHFISN 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV NL RF +EV++ EA+ FYGFQIAIENIHSEMYSLL++TY++D ++
Sbjct: 68 VLAFFAASDGIVNLNLVERFSSEVKMLEAKLFYGFQIAIENIHSEMYSLLIDTYVRDGEQ 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+A++T+P V KA WA+ WI D + FA RL+AFACVEGIFFSGSF +IFWLKKR
Sbjct: 128 KKFLFNAVKTIPSVKDKADWAIKWIEDKNSDFATRLVAFACVEGIFFSGSFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHC+FACLL+ L+ K +RVK +V +AVE+E+ F+ ++L
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACLLHRRYLKQKC--KRVKEVVMDAVEVEKRFLSESL 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM +YIEFVAD LL L K+Y NPFD+ME ISL GKTNFF+KR +
Sbjct: 246 PVDLIGMNCQLMCKYIEFVADTLLENLEEEKIYHTPNPFDFMENISLVGKTNFFDKRESQ 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V + GN F+ID DF
Sbjct: 306 YQKAFV----GIDNGNDSFRIDVDF 326
>gi|122921307|pdb|2O1Z|A Chain A, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
gi|122921308|pdb|2O1Z|B Chain B, Plasmodium Vivax Ribonucleotide Reductase Subunit R2
(Pv086155)
Length = 311
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 183/282 (64%), Positives = 224/282 (79%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L+ DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 30 EKILSKETDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNDNEKHFIKH 89
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ +V++ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 90 VLAFFAASDGIVLENLASKFLRQVKITEAKKFYAFQIAVENIHSETYSLLIDNYIKDEKE 149
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 150 RMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 209
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL EE V+ +VKEAVE+ER F+C++LPC
Sbjct: 210 KLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQNIVKEAVEVERSFICESLPC 269
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+L
Sbjct: 270 DLIGMNSRLMSQYIEFVADRLLECLGSPKIFHAKNPFNWMDL 311
>gi|388548650|gb|AFK65852.1| ribonucleotide reductase R2 [Ostreococcus lucimarinus virus OlV6]
Length = 389
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/302 (62%), Positives = 235/302 (77%), Gaps = 1/302 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAP +RF +FP++YPQ+WE+YKKA+ S WTAEEVDLS+DL W+ L +EK F+ +
Sbjct: 74 EPILAPTLNRFTVFPLKYPQLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEKKFIKY 133
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDGSE 193
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K +LF AI+TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 194 KKQLFEAIQTVPCIEKKAKWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIYWLKKR 253
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LR + + E + A+VKEAVEIE+ F+ DALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPTTETIHAIVKEAVEIEKGFILDALP 313
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 CNLIGMNSEKMSEYIEYVSDRLLKQVGVPPIWNAKNPFDFMENISLDGKTNFFEKRVGDY 373
Query: 306 QK 307
K
Sbjct: 374 GK 375
>gi|440491857|gb|ELQ74463.1| Ribonucleotide reductase, beta subunit [Trachipleistophora hominis]
Length = 325
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/330 (60%), Positives = 242/330 (73%), Gaps = 6/330 (1%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M PEE LL +++ +FP+ +W+MYK+A +SFWT EEVDLS+D+ W L DE
Sbjct: 1 MSHPPEEALLTEPTNKYTLFPLTNQDVWQMYKQALSSFWTVEEVDLSKDIDDWNRLNCDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+++VLAFFAASDGIV ENL F EVQ+ EAR FYGFQI IEN+HSEMYSLL++TY
Sbjct: 61 RHFISYVLAFFAASDGIVNENLLENFSREVQLKEARCFYGFQIMIENVHSEMYSLLIDTY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD +EK+ LF+AI + V +KA W WI D FA R+IAFACVEG+FFSGSF +I
Sbjct: 121 IKDQEEKDFLFNAIANINTVKRKAEWCFKWINDKDSDFATRVIAFACVEGLFFSGSFASI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH FA L+ + L + +E++ +VK+AVEIE EF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHYQFAVLMNNTLVNRCPKEKILEIVKDAVEIEEEF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
V D+LP +L+GMN +LM QYIEFVAD +L LG G+ Y V NPFD+ME ISL GKTNFFE
Sbjct: 241 VSDSLPVSLIGMNCKLMCQYIEFVADGILVDLGVGRRYNVQNPFDFMENISLFGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
KRV EYQK V G FK DEDF
Sbjct: 301 KRVAEYQKGYV-----GIENEQTFKTDEDF 325
>gi|269865926|ref|XP_002652096.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063168|gb|EED41960.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 330
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/304 (63%), Positives = 237/304 (77%), Gaps = 2/304 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL R+ +FPIQYP+IWE+YK E++FWT EEVD++ D H+ LT +E+ F+ +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEVYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I+D +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF+AIE +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 205
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + K + ++ +V+EAV IE+EF+ ++LP
Sbjct: 206 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 263
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN +LM QYIEFVADRLL ALG K+Y V+NPFD+ME ISLQGKTNFFE+R YQ
Sbjct: 264 SLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDFMENISLQGKTNFFERREANYQ 323
Query: 307 KASV 310
K V
Sbjct: 324 KGYV 327
>gi|190896432|gb|ACE96729.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896434|gb|ACE96730.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896436|gb|ACE96731.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896438|gb|ACE96732.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896440|gb|ACE96733.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896444|gb|ACE96735.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896446|gb|ACE96736.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896448|gb|ACE96737.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896450|gb|ACE96738.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896452|gb|ACE96739.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896454|gb|ACE96740.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896456|gb|ACE96741.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896458|gb|ACE96742.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896460|gb|ACE96743.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896462|gb|ACE96744.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896464|gb|ACE96745.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896466|gb|ACE96746.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896468|gb|ACE96747.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896470|gb|ACE96748.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896472|gb|ACE96749.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896474|gb|ACE96750.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896476|gb|ACE96751.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896478|gb|ACE96752.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896482|gb|ACE96754.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896484|gb|ACE96755.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896486|gb|ACE96756.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896488|gb|ACE96757.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896492|gb|ACE96759.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896494|gb|ACE96760.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896496|gb|ACE96761.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896498|gb|ACE96762.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896500|gb|ACE96763.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896502|gb|ACE96764.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896504|gb|ACE96765.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896506|gb|ACE96766.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/213 (91%), Positives = 202/213 (94%)
Query: 49 DLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENI 108
DL HWE LT DEKHF++HVLAFFAASDGIVLEN+AGRFM EVQV+EARAFYGFQIAIENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 109 HSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVE 168
HSEMYSLLLETYIKDS EKNRLFHAIETVPCVAKKA WAL WIDG E+FAERLIAFACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKAL 228
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERVK +
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGI 180
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIE 261
VKEAVEIEREFV D+LPCALVGMNGELMSQYIE
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|324509007|gb|ADY43795.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 337
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/308 (63%), Positives = 235/308 (76%), Gaps = 1/308 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLLA NP RF +FPI+Y IW YK A ASFWTA+E+DLS+D WE LT E+ F++
Sbjct: 17 DEPLLAENPSRFVIFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEKLTDGERFFIS 76
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VL+FFAASDGIV ENL GRF TEVQV EAR FYGFQI +E +HSEMYS ++E YIKD
Sbjct: 77 RVLSFFAASDGIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYIKDPK 136
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ F AI C+ KKA WAL WID + F RLIAFA VEGI FSGSF AIFWLKK
Sbjct: 137 EQMVHFDAIHQFECIKKKADWALRWIDDRNSPFPVRLIAFAAVEGIMFSGSFAAIFWLKK 196
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RG+M GLT SNELISRDEGLH DFACLLY ++ K S+E+V ++KEAV +E+E++ +AL
Sbjct: 197 RGVMKGLTHSNELISRDEGLHRDFACLLYKYIKHKPSQEQVYEIIKEAVSLEQEYLTEAL 256
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LMSQYIE+VAD LL LGY K+Y +NPFD+ME +S++ KTNFFE+RV E
Sbjct: 257 PVDLIGMNCRLMSQYIEYVADHLLTELGYPKVYNASNPFDFMENLSIEAKTNFFERRVSE 316
Query: 305 YQKASVMS 312
YQ+A V+S
Sbjct: 317 YQRAGVLS 324
>gi|357542115|gb|AET84875.1| ribonucleotide reductase [Micromonas pusilla virus SP1]
Length = 389
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/308 (61%), Positives = 236/308 (76%), Gaps = 1/308 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L+P +RF +FP++YP +WE+YKKA+ S WTAEEVDLS DL W+ L +E+ F+ +
Sbjct: 74 EPILSPTLNRFTVFPLKYPGLWELYKKAQMSNWTAEEVDLSTDLSDWKTLNDNEQKFIKY 133
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKDS E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDSTE 193
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF AI+TVPC+ +KA WAL W D S TF+ERL AFACVEGIFFSGSFCAI+WLKKR
Sbjct: 194 KKHLFEAIQTVPCIERKANWALKWFDTKSRTFSERLFAFACVEGIFFSGSFCAIYWLKKR 253
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LLR K S + + ++V+EAVEIE+ F+ DALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKLLRNKPSTDVIHSIVREAVEIEKGFILDALP 313
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN + MS+YIE+V+DRLL +G ++G NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 CNLIGMNSDKMSEYIEYVSDRLLKQVGQPPIWGSKNPFDFMENISLDGKTNFFEKRVGDY 373
Query: 306 QKASVMSS 313
K S
Sbjct: 374 GKMDDTSD 381
>gi|190896442|gb|ACE96734.1| ribonucleotide reductase beta subunit [Populus tremula]
gi|190896490|gb|ACE96758.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/213 (91%), Positives = 201/213 (94%)
Query: 49 DLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENI 108
DL HWE LT DEKHF++HVLAFF ASDGIVLEN+AGRFM EVQV+EARAFYGFQIAIENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFVASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 109 HSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVE 168
HSEMYSLLLETYIKDS EKNRLFHAIETVPCVAKKA WAL WIDG E+FAERLIAFACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKAL 228
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KLSEERVK +
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKGI 180
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIE 261
VKEAVEIEREFV D+LPCALVGMNGELMSQYIE
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|149392653|gb|ABR26129.1| ribonucleoside-diphosphate reductase small chain [Oryza sativa
Indica Group]
Length = 233
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/233 (82%), Positives = 210/233 (90%), Gaps = 1/233 (0%)
Query: 19 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGI 77
MFPI+YPQIWE YKKA ASFWTAEEVDLS D RHW+A L+ DE+HFV+HVLAFFAASDGI
Sbjct: 1 MFPIRYPQIWEFYKKAVASFWTAEEVDLSADARHWDAALSPDERHFVSHVLAFFAASDGI 60
Query: 78 VLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV 137
VLENLA RFM++VQVAEARAFYGFQIAIENIHSEMYSLLLETYI+D EK+RLF AI+TV
Sbjct: 61 VLENLASRFMSDVQVAEARAFYGFQIAIENIHSEMYSLLLETYIRDDVEKDRLFRAIDTV 120
Query: 138 PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 197
P V +KA WA+ WIDG E FAERL+AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL
Sbjct: 121 PAVRRKADWAMRWIDGGERFAERLVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 180
Query: 198 ISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVG 250
ISRDEGLHCDFACLLY LLR KL E RV+ +V +AV+IEREFVCDALP ALVG
Sbjct: 181 ISRDEGLHCDFACLLYDLLRGKLDESRVQEIVADAVDIEREFVCDALPVALVG 233
>gi|190896480|gb|ACE96753.1| ribonucleotide reductase beta subunit [Populus tremula]
Length = 213
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/213 (91%), Positives = 201/213 (94%)
Query: 49 DLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENI 108
DL HWE LT DEKHF++HVLAFFAASDGIVLEN+AGRFM EVQV+EARAFYGFQIAIENI
Sbjct: 1 DLGHWENLTPDEKHFISHVLAFFAASDGIVLENIAGRFMKEVQVSEARAFYGFQIAIENI 60
Query: 109 HSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVE 168
HSEMYSLLLETYIKDS EKNRLFHAIETVPCVAKKA WAL WIDG E+FAERLIAFACVE
Sbjct: 61 HSEMYSLLLETYIKDSTEKNRLFHAIETVPCVAKKAEWALRWIDGGESFAERLIAFACVE 120
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKAL 228
GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR KL EERVK +
Sbjct: 121 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLGEERVKGI 180
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIE 261
VKEAVEIEREFV D+LPCALVGMNGELMSQYIE
Sbjct: 181 VKEAVEIEREFVVDSLPCALVGMNGELMSQYIE 213
>gi|9632043|ref|NP_048832.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|1620147|gb|AAC96843.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 324
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/326 (59%), Positives = 237/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EP+LA N R F FPIQYP +W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+N LF AIE +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN ELM QYIEFVADR+ ALGY K+Y NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNAELMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ VM +++F ID+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|396081544|gb|AFN83160.1| ribonucleoside-diphosphate reductase small subunit [Encephalitozoon
romaleae SJ-2008]
Length = 326
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/325 (61%), Positives = 245/325 (75%), Gaps = 8/325 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL P +RF +FPI+Y IW +YKKAE+SFWT EEV L +D+ W L A EKHF++H
Sbjct: 8 EPLLNPEEERFVLFPIKYDDIWALYKKAESSFWTVEEVSLDKDVEDWGRLNAKEKHFISH 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV NL RF +EV++ EAR FYGFQ+AIE+IHSEMYSLL+ETYI++++E
Sbjct: 68 VLAFFAASDGIVNLNLVERFSSEVKILEARFFYGFQVAIESIHSEMYSLLIETYIRNAEE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AI+ +P V KA WA+ WI D FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 128 RDFLFNAIKNIPSVKDKADWAIKWIEDKDSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHC+FAC L+ L K + R K +V +AV IE+ F+ ++L
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACHLHRYHLNNKCT--RTKEVVMDAVRIEKRFLSESL 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM +YIEFVAD LL LG K+Y NPFD+ME ISL GKTNFF+KR +
Sbjct: 246 PVNLIGMNCELMCRYIEFVADTLLENLGEEKIYHAINPFDFMENISLVGKTNFFDKRESQ 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V GN F+ID DF
Sbjct: 306 YQKAFV----GIENGNDSFRIDVDF 326
>gi|338728582|ref|XP_003365702.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Equus caballus]
Length = 299
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/299 (66%), Positives = 236/299 (78%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQ 91
++ EA+ +EVDLS+DL HW LT+DEK+F++HVLAFFAASDGIV ENL RF EVQ
Sbjct: 5 ERPEAARPEQDEVDLSKDLPHWNKLTSDEKYFISHVLAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALQWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGA 270
L++ L K SEERV+ ++ AVEIE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEERVREIIVNAVEIEQEFLTEALPVDLIGMNCVLMKQYIEFVADRLLVE 244
Query: 271 LGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ +HVF +D DF
Sbjct: 245 LGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETT----DHVFTLDADF 299
>gi|448925009|gb|AGE48590.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus AN69C]
gi|448930394|gb|AGE53959.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus IL-3A]
gi|448933837|gb|AGE57392.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NE-JV-4]
Length = 333
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/328 (58%), Positives = 238/328 (72%), Gaps = 7/328 (2%)
Query: 4 IPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEK 61
+ +EP+LA N R F FPIQYP +W+MYKKA A+FWT EEV L+ D+ W E L DE+
Sbjct: 11 VNQEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDER 70
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF+ H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I
Sbjct: 71 HFIKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALI 130
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E+N LF AIE +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFW
Sbjct: 131 SDEQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFW 190
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
L+ +G+MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+C
Sbjct: 191 LRNKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFIC 250
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DA+PC L+GMN +LM QYIEFVADR+ ALGY K+Y NPF +MELISLQGKTNFFEKR
Sbjct: 251 DAIPCRLIGMNADLMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKR 310
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
V +YQ+ VM +++F ID+DF
Sbjct: 311 VSDYQRPGVMKP-----EDNIFAIDDDF 333
>gi|444318509|ref|XP_004179912.1| hypothetical protein TBLA_0C05960 [Tetrapisispora blattae CBS 6284]
gi|387512953|emb|CCH60393.1| hypothetical protein TBLA_0C05960 [Tetrapisispora blattae CBS 6284]
Length = 393
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/325 (60%), Positives = 240/325 (73%), Gaps = 10/325 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL + R +FPI+YP I+E YK+AEASFWTAE + L A+E+ F++
Sbjct: 78 DEPLLNKDKKRKILFPIEYPDIYEAYKRAEASFWTAEGNN---------RLNANERFFIS 128
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F EVQV EAR FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 129 RVLAFFAASDGIVNENLNENFSVEVQVPEARLFYGFQIMIENIHSETYSLLIDTYIKDPK 188
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E LF AI+T+P + +KA WA+ WI+ S+ +AERL+AFA +EGIFFSGSF +IFWLKK
Sbjct: 189 ESQFLFDAIQTIPQIKEKAEWAIRWINDSDALYAERLVAFASIEGIFFSGSFASIFWLKK 248
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEGLH DFACLL++ + K S + ++ +V EAVEIE+ + DAL
Sbjct: 249 RGLMPGLTFSNELICRDEGLHTDFACLLFTHIENKPSHDIIEKIVTEAVEIEKRYFIDAL 308
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P AL+GMN +LM+QY+EFVADRLL A G K+Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 309 PVALLGMNADLMNQYVEFVADRLLVAFGNPKVYNVENPFDFMENISLAGKTNFFEKRVSD 368
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKASVM+ + DE F
Sbjct: 369 YQKASVMAVASNKEAGGAMAFDESF 393
>gi|363582863|ref|ZP_09315673.1| ribonucleoside-diphosphate reductase small chain [Flavobacteriaceae
bacterium HQM9]
Length = 326
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/329 (58%), Positives = 247/329 (75%), Gaps = 6/329 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEK 61
S EP+L NP+RF +FPIQ+ +W+ YKK EA FWTAEE+DL QD+ W+ L+ DE+
Sbjct: 2 STSVEPILKENPNRFVIFPIQHHDLWDWYKKMEACFWTAEEIDLHQDMTDWQTKLSDDER 61
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F+ H+LAFFAASDGIV N+ F+ EVQ EA Y FQ+ IENIHSE YSLL++TY+
Sbjct: 62 YFIKHILAFFAASDGIVNHNIGENFVNEVQYPEAMFVYTFQMMIENIHSETYSLLIDTYV 121
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFW 181
KD EK++LF A+E P + KKA WALNW S++FAERLIAFA VEG+FFSG+FC+IFW
Sbjct: 122 KDEVEKDKLFRALEEFPAIKKKADWALNWA-TSDSFAERLIAFAAVEGVFFSGAFCSIFW 180
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFV 240
LKKRGLMPGLTFSNELISRDEG+H +FA L++ L K+ E+R+K ++ A+E+E+ F+
Sbjct: 181 LKKRGLMPGLTFSNELISRDEGMHTEFAVHLHNNHLINKVPEKRIKEIILGALEVEKIFI 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
++LP +L+GMN +LM+QY+EFV DRLL LG K + ANPFD+M++ISLQGKTNFFEK
Sbjct: 241 TESLPVSLIGMNAKLMTQYLEFVTDRLLSELGCSKEFNTANPFDFMDMISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RV EYQKA VM N + D DF
Sbjct: 301 RVSEYQKAGVM---NKDKDAEKISFDADF 326
>gi|157953769|ref|YP_001498660.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
virus AR158]
gi|156068417|gb|ABU44124.1| hypothetical protein AR158_C579R [Paramecium bursaria Chlorella
virus AR158]
Length = 324
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/326 (58%), Positives = 237/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EP+L+ N R F FPIQYP +W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+N LF AIE +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN ELM QYIEFVADR+ ALGY K+Y NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNSELMGQYIEFVADRIFIALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ VM +++F ID+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|448926466|gb|AGE50042.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Canal-1]
Length = 325
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/325 (59%), Positives = 239/325 (73%), Gaps = 7/325 (2%)
Query: 7 EPLLAP-NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EPLLA ++ FPI+YP I++MYKKA A+FWT EEV L+QD+ W E L DE+HF+
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+L FFA SDG+V+ENL F EV AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
DE+N+LF AIET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 DERNQLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L KL+ E VK++V+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLALETVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN ELMS YIEF+ADR+ ALGY K YG NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSELMSHYIEFIADRIFVALGYPKQYGSENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N ++VF ID DF
Sbjct: 306 YQKAGVM-----NAEDNVFAIDADF 325
>gi|444727943|gb|ELW68416.1| Ribonucleoside-diphosphate reductase subunit M2 B [Tupaia
chinensis]
Length = 365
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/363 (57%), Positives = 244/363 (67%), Gaps = 59/363 (16%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L DEK+F++
Sbjct: 23 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKPDEKYFIS 82
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 83 HILAFFAASDGIVNENLVERFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 142
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF GSF AIFWLKK
Sbjct: 143 KREFLFNAIETMPYVKKKADWALRWIADRKSTF----------------GSFAAIFWLKK 186
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIE-------- 236
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE
Sbjct: 187 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 246
Query: 237 ------------------------------REFVCDALPCALVGMNGELMSQYIEFVADR 266
+EF+ +ALP L+GMN LM QYIEFVADR
Sbjct: 247 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKEFLTEALPVGLIGMNCVLMKQYIEFVADR 306
Query: 267 LLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKID 326
LL LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D
Sbjct: 307 LLVELGFSKIFHAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLD 362
Query: 327 EDF 329
DF
Sbjct: 363 ADF 365
>gi|448931089|gb|AGE54652.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus KS1B]
Length = 324
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/326 (58%), Positives = 237/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EP+LA N R F FPIQYP +W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+N LF AIE +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN +LM QYIEFVADR+ ALGY K+Y NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNADLMGQYIEFVADRIFIALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ VM +++F ID+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|448931455|gb|AGE55017.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus MA-1D]
gi|448934897|gb|AGE58449.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NY-2B]
gi|448935281|gb|AGE58832.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NYs1]
Length = 324
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/326 (58%), Positives = 237/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EP+L+ N R F FPIQYP +W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+N LF AIE +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN ELM QYIEFVADR+ ALGY K+Y NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNAELMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ VM +++F ID+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|426360445|ref|XP_004047453.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
[Gorilla gorilla gorilla]
Length = 382
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/356 (58%), Positives = 248/356 (69%), Gaps = 36/356 (10%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EK------------------NRLFH----------AIETVPCVAKKATWALNWIDGSETF 157
++ LF + V V L I ET
Sbjct: 151 KRYCWDFIYKILLMAWLCSDQNLFQNSMLRKDYSIVVFIVIYVYIYICKCLQCISKIETI 210
Query: 158 ----AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 213
ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++
Sbjct: 211 LCLPGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMF 270
Query: 214 SLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGY 273
L K SEERV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL LG+
Sbjct: 271 QYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGF 330
Query: 274 GKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 331 SKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 382
>gi|241951880|ref|XP_002418662.1| ribonucleoside diphosphate reductase, putative [Candida
dubliniensis CD36]
gi|223642001|emb|CAX43965.1| ribonucleoside diphosphate reductase, putative [Candida
dubliniensis CD36]
Length = 394
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/326 (60%), Positives = 246/326 (75%), Gaps = 5/326 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL + R ++PI+YP++W+ YKK+ ASFWTAEE+DLS+DL W + +E+ F++
Sbjct: 71 EPLLTKDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLADWNNKMNENERFFIS 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F EVQ+ EA++ Y FQI +ENIHSE YSLL+ETY KD +
Sbjct: 131 RVLAFFAASDGIVNENLVENFCAEVQIPEAQSVYKFQIMMENIHSETYSLLIETYFKDPE 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AIE +P + +KA WA+ WI D +AERL+AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EADFLFNAIENIPFIREKADWAIRWIQDEDALYAERLVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEG+H D+ACLL+S L+ K S E ++ ++ EAV IE+++ DAL
Sbjct: 251 RGLMPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSPEIIEKIITEAVTIEKKYFSDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 311 PVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVTNPFDFMENISLAGKTNFFEKRVSD 370
Query: 305 YQKASVMSSLNG-NGGNHVFKIDEDF 329
YQKA VM ++ N +F D+DF
Sbjct: 371 YQKAGVMEKVDKQNEETGLF--DQDF 394
>gi|448929830|gb|AGE53396.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus GM0701.1]
Length = 325
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/325 (59%), Positives = 239/325 (73%), Gaps = 7/325 (2%)
Query: 7 EPLLAP-NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EPLLA ++ FPI+YP I++MYKKA A+FWT EEV L+QD+ W E L DE+HF+
Sbjct: 6 EPLLANIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+L FFA SDG+V+ENL F EV AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N+LF AIET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L KLS E VK++V+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLETVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN +LMSQYIEFVADR+ ALGY K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N ++VF ID DF
Sbjct: 306 YQKAGVM-----NADDNVFAIDGDF 325
>gi|172448|gb|AAA34987.1| ribonucleotide reductase subunit 2 (RNR2) [Saccharomyces
cerevisiae]
Length = 399
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/330 (61%), Positives = 244/330 (73%), Gaps = 11/330 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAE---EVDLSQDLRHWE-ALTADEK 61
EEPLL + +R +FPI+Y +IW+ Y EASFWTAE E+DLS+D+ W + +E+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAY---EASFWTAETAEEIDLSKDIHDWNNRMNENER 131
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
F++ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYI
Sbjct: 132 FFISRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYI 191
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IF
Sbjct: 192 KDPKESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIF 251
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ +
Sbjct: 252 WLKKRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYF 311
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEK
Sbjct: 312 LDALPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEK 371
Query: 301 RVGEYQKASVMS-SLNGNGGNHVFKIDEDF 329
RV +YQKA VMS S G F +EDF
Sbjct: 372 RVSDYQKAGVMSKSTKQEAG--AFTFNEDF 399
>gi|155370982|ref|YP_001426516.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124302|gb|ABT16169.1| hypothetical protein ATCV1_Z035L [Acanthocystis turfacea Chlorella
virus 1]
gi|448925781|gb|AGE49359.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Can0610SP]
gi|448932290|gb|AGE55849.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus MO0605SPH]
gi|448932944|gb|AGE56501.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NE-JV-2]
gi|448933285|gb|AGE56841.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NE-JV-3]
gi|448933961|gb|AGE57515.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus NTS-1]
gi|448935746|gb|AGE59295.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus OR0704.3]
gi|448936417|gb|AGE59964.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus WI0606]
Length = 325
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/325 (59%), Positives = 239/325 (73%), Gaps = 7/325 (2%)
Query: 7 EPLLAP-NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EPLLA ++ FPI+YP I++MYKKA A+FWT EEV L+QD+ W E L DE+HF+
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+L FFA SDG+V+ENL F EV AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQGYNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N+LF AIET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNKLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L KLS + VK++V+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN +LMSQYIEFVADR+ ALGY K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N ++VF ID DF
Sbjct: 306 YQKAGVM-----NADDNVFAIDADF 325
>gi|448925447|gb|AGE49026.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus Br0604L]
Length = 325
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/325 (59%), Positives = 239/325 (73%), Gaps = 7/325 (2%)
Query: 7 EPLLAP-NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EPLLA ++ FPI+YP I++MYKKA A+FWT EEV L+QD+ W E L DE+HF+
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+L FFA SDG+V+ENL F EV AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N+LF AIET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWASKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L KLS + VK++V+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN +LMSQYIEFVADR+ ALGY K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N ++VF ID DF
Sbjct: 306 YQKAGVM-----NADDNVFAIDADF 325
>gi|448931839|gb|AGE55400.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus MA-1E]
Length = 324
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/326 (58%), Positives = 236/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EP+LA N R F FPIQYP +W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+N LF AIE +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM +YIEFVADR+ ALGY K+Y NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNATLMKEYIEFVADRIFIALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ VM +++F ID+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|345779193|ref|XP_003431837.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B [Canis
lupus familiaris]
Length = 299
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/299 (65%), Positives = 234/299 (78%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQ 91
++ EA+ +EVDLS+DL HW L +DEK+F++H+LAFFAASDGIV ENL RF EVQ
Sbjct: 5 ERPEAARPEPDEVDLSKDLPHWNKLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 EDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGA 270
L++ L K SEERV+ ++ AVEIE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEERVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLVE 244
Query: 271 LGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 245 LGFSKVFQAENPFDFMENISLEGKTNFFEKRVAEYQRFAVMAETTDN----VFTLDADF 299
>gi|402878879|ref|XP_003903091.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 3 [Papio anubis]
Length = 299
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/298 (65%), Positives = 234/298 (78%), Gaps = 5/298 (1%)
Query: 33 KAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQV 92
+ EA+ +EVDLS+DL HW L ADEK+F++H+LAFFAASDGIV ENL RF EVQV
Sbjct: 6 RPEAAGLDLDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQV 65
Query: 93 AEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI- 151
EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI
Sbjct: 66 PEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIA 125
Query: 152 DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 211
D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL
Sbjct: 126 DRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL 185
Query: 212 LYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGAL 271
++ L K SEERV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL L
Sbjct: 186 MFQYLVNKPSEERVREIIVDAVQIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVEL 245
Query: 272 GYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
G+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 246 GFSKIFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 299
>gi|403299936|ref|XP_003940727.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Saimiri boliviensis boliviensis]
Length = 299
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/299 (65%), Positives = 234/299 (78%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQ 91
++ EA+ +EVDLS+DL HW L ADEK+F++H+LAFFAASDGIV ENL RF EVQ
Sbjct: 5 ERPEAARLDQDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGA 270
L++ L K SEERV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVE 244
Query: 271 LGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
LG+ K + NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 245 LGFSKFFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 299
>gi|448936080|gb|AGE59628.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus TN603.4.2]
Length = 325
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/325 (59%), Positives = 239/325 (73%), Gaps = 7/325 (2%)
Query: 7 EPLLAP-NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EPLLA ++ FPI+YP I++MYKKA A+FWT EEV L+QD+ W E L DE+HF+
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+L FFA SDG+V+ENL F EV AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N+LF AIET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 TERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F LLYS L KLS + VK++V+EAV E++F+CDA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN +LMSQYIEFVADR+ ALGY K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSQYIEFVADRIFTALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N ++VF ID DF
Sbjct: 306 YQKAGVM-----NADDNVFAIDGDF 325
>gi|448930767|gb|AGE54331.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus IL-5-2s1]
Length = 324
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 237/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EP+L+ N R F FPIQYP +W+MYKKA A+FWT EEV L+ D+ W + L DE+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWRDKLNDDERHF 63
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I +
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISN 123
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+N LF AIE +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN ELM QYIEFVADR+ ALGY K+Y NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNAELMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ VM +++F ID+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|131840053|ref|YP_001096062.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|84181618|gb|ABC55221.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706628|gb|ABG42854.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 3]
gi|129560539|dbj|BAF48834.1| ribonucleotide reductase small chain [Cyprinid herpesvirus 3]
Length = 335
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/302 (64%), Positives = 240/302 (79%), Gaps = 2/302 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLLAP+ RF + I++ IW MYKKA+ S WTAEE+DL++D WE+L+ +EK F+ +
Sbjct: 14 EPLLAPSNSRFTLDVIEHQDIWSMYKKAQFSNWTAEEIDLAKDTAGWESLSENEKFFLKN 73
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RFM EVQ EAR FYGFQIAIEN+HSE+Y+ LL TYI D E
Sbjct: 74 ILAFFAASDGIVNENLATRFMKEVQYFEARCFYGFQIAIENVHSEVYAKLLNTYILDPVE 133
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+N LF A+ET+PC+ KKA WALNWI+ + TF ERL+AF VEGIFFSG+F +IFWLK++
Sbjct: 134 RNGLFKAMETMPCIKKKADWALNWIESPDATFGERLVAFTAVEGIFFSGAFASIFWLKQK 193
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
MPGLTFSNELISRDEGLH DFACLL+S LR K S+ERV+A++ EAVEIE+EF+ +L
Sbjct: 194 VSMPGLTFSNELISRDEGLHRDFACLLFSSHLRHKPSKERVRAIITEAVEIEKEFLTQSL 253
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +LVGMN +LM +YI++VAD LL +G +LY PFD+ME ISL+GKTNFFEKRV +
Sbjct: 254 PVSLVGMNHDLMCKYIQYVADHLLCQMGLSRLYNTPCPFDFMENISLEGKTNFFEKRVAD 313
Query: 305 YQ 306
YQ
Sbjct: 314 YQ 315
>gi|289177076|ref|NP_001165949.1| ribonucleoside-diphosphate reductase subunit M2 B isoform 3 [Homo
sapiens]
gi|55631160|ref|XP_528204.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 3 [Pan troglodytes]
gi|42794058|dbj|BAD11774.1| p53-inducible ribonucleotide reductase small subunit 2 long form
[Homo sapiens]
gi|119612246|gb|EAW91840.1| ribonucleotide reductase M2 B (TP53 inducible), isoform CRA_a [Homo
sapiens]
Length = 299
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/299 (65%), Positives = 235/299 (78%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQ 91
++ EA+ +EVDLS+DL HW L ADEK+F++H+LAFFAASDGIV ENL RF EVQ
Sbjct: 5 ERPEAAGLDQDEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGA 270
L++ L K SEERV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVE 244
Query: 271 LGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 245 LGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 299
>gi|448928017|gb|AGE51589.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CviKI]
gi|448929037|gb|AGE52606.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CvsA1]
Length = 324
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/326 (58%), Positives = 235/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EP+LA N R F FPIQYP +W+MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILADNGSRKFSAFPIQYPDMWDMYKKAVATFWTTEEVPLNADVVDWREKLNDDERHF 63
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+L FFA SDGIV+ENL F EV V EAR FY +Q E+IHSE Y+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFSVEVTVPEARQFYAYQTFNESIHSEQYALLIDALISD 123
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+N LF AIE +P V KA WA W++ ++FAERL+A+ CVEGI FSGSFCAIFWL+
Sbjct: 124 EQERNELFDAIENIPAVHNKAKWAQKWLEPGKSFAERLVAWVCVEGILFSGSFCAIFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDA 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC L+GMN LM +YIEFVADR+ LGY K+Y NPF +MELISLQGKTNFFEKRV
Sbjct: 244 IPCRLIGMNATLMKEYIEFVADRIFVTLGYDKVYNSKNPFAFMELISLQGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ VM +++F ID+DF
Sbjct: 304 DYQRPGVMKP-----EDNIFAIDDDF 324
>gi|335286238|ref|XP_003355054.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 B
isoform 2 [Sus scrofa]
Length = 299
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/299 (65%), Positives = 233/299 (77%), Gaps = 5/299 (1%)
Query: 32 KKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQ 91
++ EA+ EEVDLS+DL HW L +DEK+F++H+LAFFAASDGIV ENL RF EVQ
Sbjct: 5 ERPEAAGSEQEEVDLSKDLPHWNRLKSDEKYFISHILAFFAASDGIVNENLVERFSQEVQ 64
Query: 92 VAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI 151
V EAR FYGFQI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI
Sbjct: 65 VPEARCFYGFQILIENVHSEMYSLLIDTYIRDPKQREFLFNAIETMPYVKKKADWALRWI 124
Query: 152 -DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 210
D TF ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC
Sbjct: 125 ADRKATFGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFAC 184
Query: 211 LLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGA 270
L++ L K SE RV+ ++ AVEIE+EF+ +ALP L+GMN LM QYIEFVADRLL
Sbjct: 185 LMFQYLVNKPSEARVREIIVNAVEIEQEFLTEALPVGLIGMNCVLMKQYIEFVADRLLTE 244
Query: 271 LGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
LG+ K++ NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 245 LGFSKVFQAENPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 299
>gi|27769295|gb|AAH42468.1| Similar to ribonucleotide reductase M2 polypeptide, partial [Homo
sapiens]
Length = 285
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/289 (67%), Positives = 230/289 (79%), Gaps = 5/289 (1%)
Query: 42 EEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGF 101
EEVDLS+DL HW L ADEK+F++H+LAFFAASDGIV ENL RF EVQV EAR FYGF
Sbjct: 1 EEVDLSKDLPHWNKLKADEKYFISHILAFFAASDGIVNENLVERFSQEVQVPEARCFYGF 60
Query: 102 QIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAER 160
QI IEN+HSEMYSLL++TYI+D ++ LF+AIET+P V KKA WAL WI D TF ER
Sbjct: 61 QILIENVHSEMYSLLIDTYIRDPKKREFLFNAIETMPYVKKKADWALRWIADRKSTFGER 120
Query: 161 LIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKL 220
++AFA VEG+FFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K
Sbjct: 121 VVAFAAVEGVFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKP 180
Query: 221 SEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
SEERV+ ++ +AV+IE+EF+ +ALP L+GMN LM QYIEFVADRLL LG+ K++
Sbjct: 181 SEERVREIIVDAVKIEQEFLTEALPVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAE 240
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
NPFD+ME ISL+GKTNFFEKRV EYQ+ +VM+ N VF +D DF
Sbjct: 241 NPFDFMENISLEGKTNFFEKRVSEYQRFAVMAETTDN----VFTLDADF 285
>gi|341884021|gb|EGT39956.1| CBN-RNR-2 protein [Caenorhabditis brenneri]
Length = 761
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/315 (60%), Positives = 238/315 (75%), Gaps = 1/315 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
I ++PLL + +RF ++PI++ IW YK A ASFWT EE+DL +D+ W L+ADEK F
Sbjct: 439 IIDKPLLVDSDNRFVIYPIKHRDIWNYYKMAVASFWTTEEIDLGKDMDDWNKLSADEKTF 498
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++ VLAFFAASDGIV+ENL RF TEV++ EAR FYGFQIA+ENIHSE Y+ L+ETYIKD
Sbjct: 499 ISTVLAFFAASDGIVVENLCERFSTEVKLTEARFFYGFQIAVENIHSETYAKLIETYIKD 558
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWL 182
E+ LF AI + KKA WAL WI +ET FAERL+AFA VEGIFFSGSF +IFWL
Sbjct: 559 ESERRVLFDAINGFEFIKKKADWALRWISDTETNFAERLVAFAAVEGIFFSGSFASIFWL 618
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLT SNELI+RDEGLH DFACLL+S + K S++RV ++ EAV IE +F+ +
Sbjct: 619 KKRGLMPGLTHSNELIARDEGLHRDFACLLFSKIVNKPSQKRVFDIIDEAVSIELDFLTE 678
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP ++GMN LM +YI +VAD LL LG+ KLY NPFD+ME IS++GK NFFEKRV
Sbjct: 679 ALPVNVIGMNRYLMKKYIRYVADHLLVELGFSKLYDETNPFDFMENISMEGKANFFEKRV 738
Query: 303 GEYQKASVMSSLNGN 317
EYQ+ +MS + N
Sbjct: 739 SEYQRPGIMSDPSDN 753
>gi|255724924|ref|XP_002547391.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
tropicalis MYA-3404]
gi|240135282|gb|EER34836.1| ribonucleoside-diphosphate reductase small chain 1 [Candida
tropicalis MYA-3404]
Length = 387
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/325 (59%), Positives = 239/325 (73%), Gaps = 3/325 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL +P R +FPI+YP+IW YKK+ ASFWTAEE+DLS+D WE + DE+ F++
Sbjct: 64 EPLLREDPSRRTVFPIKYPEIWTFYKKSVASFWTAEEIDLSKDFDDWENKMNKDERFFIS 123
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F TEV++ EA++ Y FQI +ENIHSE YSLL+ETY KD
Sbjct: 124 RVLAFFAASDGIVNENLVENFCTEVKLPEAKSVYKFQIMMENIHSETYSLLIETYFKDPK 183
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AI+ + + +KA WA+ WI E FAERL+AFA +EGIFFSGSF +IFWLKK
Sbjct: 184 EADFLFNAIDNIKYIGEKADWAIRWIQDEEALFAERLVAFAAIEGIFFSGSFASIFWLKK 243
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEG+H D+ACLL+S L K ++ ++ EAV IE+++ DAL
Sbjct: 244 RGLMPGLTFSNELICRDEGIHTDYACLLFSYLENKPDPSIIEKIITEAVSIEKKYFSDAL 303
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM QY+E+ ADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 304 PVSLLGMNCDLMCQYVEYCADRLLVAFGNDKYYNVTNPFDFMENISLAGKTNFFEKRVSD 363
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+A VM N G + DEDF
Sbjct: 364 YQRAGVMEKAE-NKGTGMVSFDEDF 387
>gi|402495788|ref|ZP_10842508.1| ribonucleoside-diphosphate reductase small chain [Aquimarina
agarilytica ZC1]
Length = 326
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 245/325 (75%), Gaps = 6/325 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L NP+RF +FPI++ +WE YKK EA FWTAEE+DL QDL W+ L+ DE++F+
Sbjct: 6 EPILKENPNRFVIFPIEHHDLWEWYKKMEACFWTAEEIDLHQDLSDWKTKLSEDERYFIK 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV N+ F+ EVQ EA Y FQ+ IENIHSE YSLL++TY+KD
Sbjct: 66 HILAFFAASDGIVNHNIGENFVNEVQYPEAMFVYTFQMMIENIHSETYSLLIDTYVKDEV 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF A+E P + KKA WALNW S++FAERLIAFA VEG+FFSG+FC+IFWLKKR
Sbjct: 126 EKDKLFRALEEFPAIKKKADWALNWA-ASDSFAERLIAFAAVEGVFFSGAFCSIFWLKKR 184
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEG+H +FA L++ L K+ E+R+K ++ A+E+E+ F+ ++L
Sbjct: 185 GLMPGLTFSNELISRDEGMHTEFAVHLHNKHLVNKVPEKRIKEIILGALEVEKIFITESL 244
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM+QY+EFV DRLL LG K + ANPFD+M++I ++GKTNFFEKRV E
Sbjct: 245 PVSLIGMNAKLMTQYLEFVTDRLLSELGCSKEFNTANPFDFMDMIGMEGKTNFFEKRVSE 304
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA V LN + D DF
Sbjct: 305 YQKAGV---LNKDKDAEKISFDADF 326
>gi|308485547|ref|XP_003104972.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
gi|308257293|gb|EFP01246.1| hypothetical protein CRE_24501 [Caenorhabditis remanei]
Length = 323
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 242/324 (74%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL + RF ++PI++ IW YKKA ASFWT EEVD+ +D+ WE L+ADEK F++
Sbjct: 4 EPLLVESGIRFVIYPIEHHDIWSFYKKALASFWTTEEVDVGKDMADWERLSADEKKFIST 63
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV+ENL RF EV++ EAR FYGFQIA+ENIHSE Y+ L+ETYIKD E
Sbjct: 64 VLAFFAASDGIVVENLCSRFANEVKIVEARFFYGFQIAVENIHSETYAKLIETYIKDERE 123
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF AI+ + KKA WAL WI D + FA RL+AFA VEGIFFSGSF +IFWLKKR
Sbjct: 124 RLVLFDAIKNFEFIKKKADWALRWISDMTSPFAHRLVAFAAVEGIFFSGSFASIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GL+PGLT SNELISRDEGLH DFACLL++ + K S E V +V EAV IE EF+ ALP
Sbjct: 184 GLLPGLTHSNELISRDEGLHRDFACLLFTKIVDKPSREIVCEIVDEAVTIELEFLDQALP 243
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
++GMN LMSQYI++VAD LL LG+ KLY NPFD+ME IS+ GKTNFFEKRV EY
Sbjct: 244 VNVIGMNYTLMSQYIKYVADHLLEELGFEKLYHTINPFDFMENISIDGKTNFFEKRVSEY 303
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
Q++ VM+ + + VF++D +F
Sbjct: 304 QRSGVMA----DAEDRVFRLDANF 323
>gi|163955147|ref|YP_001648251.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
gi|163638596|gb|ABY27955.1| hypothetical protein OsV5_174r [Ostreococcus virus OsV5]
Length = 322
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/302 (61%), Positives = 231/302 (76%), Gaps = 1/302 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
+P+LA +RF +FP++YP +WE+YKKA+ S WTAEEVDLS+DL W+ L +E+ F+ +
Sbjct: 7 DPILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQKFIKY 66
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 67 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSE 126
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF AI+TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 127 KKELFEAIQTVPCIEKKAQWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKR 186
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LR + + + A+V+EAVEIE+ F+ DALP
Sbjct: 187 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPGVDTIHAIVREAVEIEKGFILDALP 246
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 247 CNLIGMNSEKMSEYIEYVSDRLLKQIGVPTIWNSKNPFDFMENISLDGKTNFFEKRVGDY 306
Query: 306 QK 307
K
Sbjct: 307 GK 308
>gi|313768143|ref|YP_004061574.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599750|gb|ADQ91771.1| hypothetical protein BpV1_144c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 387
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 175/301 (58%), Positives = 232/301 (77%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L P RF +FPI++ +W +YKKA+ S WTAEE+D S+D+ W L+ +EKHF+ +
Sbjct: 73 EPMLLPTLSRFTVFPIEHENLWTLYKKAQMSNWTAEEIDFSKDMDDWNELSDNEKHFIKY 132
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F E+Q+ EAR+FY +Q E +H E YS L++ YIK+S E
Sbjct: 133 ILAFFAGSDGIVFENINNNFADEIQLTEARSFYAYQSHNEMVHGETYSKLIDKYIKNSSE 192
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K +LF AI+T+PC+ +KA WA+ W D FAERL+AFACVEGIFFSGSFCAIFWLKKRG
Sbjct: 193 KKQLFEAIQTIPCIERKAKWAMKWFDKKRPFAERLLAFACVEGIFFSGSFCAIFWLKKRG 252
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
L+PGL FSNELISRDEG+H +FA L+++L+ K S+ ++ ++++AV IE+EF+ DALPC
Sbjct: 253 LLPGLCFSNELISRDEGMHQEFAVELFNMLKNKPSQNTIEEIIRDAVSIEKEFITDALPC 312
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN MS+YIE+VADRL +G+ K++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 313 SLIGMNSGKMSEYIEYVADRLSKQVGHNKIWNTKNPFDFMENISLDGKTNFFEKRVGDYG 372
Query: 307 K 307
K
Sbjct: 373 K 373
>gi|260666020|ref|YP_003212974.1| hypothetical protein H665_p151 [Ostreococcus tauri virus 1]
gi|260161038|emb|CAY39739.1| hypothetical protein OTV1_151 [Ostreococcus tauri virus 1]
Length = 389
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/302 (61%), Positives = 231/302 (76%), Gaps = 1/302 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA +RF +FP++YP +WE+YKKA+ S WTAEEVDLS+DL W+ L +E+ F+ +
Sbjct: 74 EPILASTLNRFTVFPLKYPHLWELYKKAQMSNWTAEEVDLSKDLDDWKTLNENEQKFIKY 133
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV EN+ F EVQ++EAR+FY +Q E +H E YS L++ YIKD E
Sbjct: 134 ILAFFAGSDGIVFENINNNFADEVQISEARSFYAYQCHNEMVHGETYSKLIDKYIKDPSE 193
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF AI+TVPC+ KKA WA+ W D S +FAERL AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 194 KKELFEAIQTVPCIEKKAQWAMKWFDTKSRSFAERLFAFACVEGIFFSGSFCAIFWLKKR 253
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGL FSNELISRDEGLH +FA L+ LR + + + A+V+EAV+IE+ F+ DALP
Sbjct: 254 GLMPGLCFSNELISRDEGLHQEFAVELFKTLRNRPGVDTIHAIVREAVDIEKGFILDALP 313
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN E MS+YIE+V+DRLL +G ++ NPFD+ME ISL GKTNFFEKRVG+Y
Sbjct: 314 CNLIGMNSEKMSEYIEYVSDRLLKQIGVPTIWNSKNPFDFMENISLDGKTNFFEKRVGDY 373
Query: 306 QK 307
K
Sbjct: 374 GK 375
>gi|422933799|ref|YP_007003842.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 2]
gi|386686112|gb|AFJ20464.1| ribonucleotide reductase subunit 2 [Cyprinid herpesvirus 2]
Length = 337
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/317 (61%), Positives = 241/317 (76%), Gaps = 4/317 (1%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M +P EPLL + + + IWEMYKKA+ S WTAEE+DL++D+ W AL+ DE
Sbjct: 10 MTFVPYEPLLHDTSVSKYILQVTHKDIWEMYKKAQNSNWTAEEIDLAKDMDGWYALSKDE 69
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+ +VLAFFAASDGIV ENL RF EVQ EA+ FYGFQ+AIEN+HSE+Y+ LL TY
Sbjct: 70 QHFLKYVLAFFAASDGIVNENLCERFTREVQYVEAKCFYGFQMAIENVHSEVYAKLLMTY 129
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAI 179
I D E++RLF AIE +P + +KA WA+ WI+ S TF ERL+AFA VEGIFFSGSF AI
Sbjct: 130 ITDVAERDRLFGAIEHIPSIKRKARWAMKWINSQSATFGERLVAFAAVEGIFFSGSFAAI 189
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIERE 238
FWLK++G MPGL FSNELISRDEGLH DFACLLY+ L K S+E V +++KEAVEIE+E
Sbjct: 190 FWLKQKGTMPGLYFSNELISRDEGLHRDFACLLYTGHLLHKPSQETVYSIIKEAVEIEKE 249
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+ ++LP +L+GMN LMSQYIE+VAD LL LG +LY NPFD+ME ISL+GKTNFF
Sbjct: 250 FLTESLPVSLLGMNNRLMSQYIEYVADHLLCQLGLARLYSTPNPFDFMENISLEGKTNFF 309
Query: 299 EKRVGEYQ--KASVMSS 313
EKRVG+YQ S +SS
Sbjct: 310 EKRVGDYQVNTTSTVSS 326
>gi|448932723|gb|AGE56281.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NE-JV-1]
Length = 325
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/325 (57%), Positives = 241/325 (74%), Gaps = 7/325 (2%)
Query: 7 EPLLAPN-PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
E LLA N +++ FPI++P ++ MYKKA ++FWT EEV L QD+ W + LT DE++F+
Sbjct: 6 ESLLADNKSNKYSAFPIKHPDLFAMYKKAVSTFWTVEEVPLHQDIADWRDKLTGDERYFI 65
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
HVL FFA SDGIV+EN+A F TEV AR FY +Q+ E++HSEMYSLLL+ ++D
Sbjct: 66 KHVLGFFAGSDGIVMENIANNFSTEVTDPSARLFYAYQMFNESVHSEMYSLLLDALVEDE 125
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N LF AIET+P V KKA+WA+N++ ++FAERL+A+ CVEG+ FSGSFCAIFW +
Sbjct: 126 TERNSLFEAIETIPAVGKKASWAINYLSPQKSFAERLVAWICVEGLLFSGSFCAIFWFRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGL SNE ISRDEGLH F L+YS L KLS E VK++V+EAV E+EF+ DA+
Sbjct: 186 RGLMPGLGLSNEFISRDEGLHQQFGELMYSKLENKLSLETVKSIVEEAVANEKEFIIDAI 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN ELMSQYIEF+ADR+ ALGY K Y ANPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNQELMSQYIEFIADRIFAALGYPKQYNAANPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
Y + VM ++VF D DF
Sbjct: 306 YARPGVMKP-----EDNVFSTDGDF 325
>gi|312599293|gb|ADQ91316.1| hypothetical protein BpV2_149c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 387
Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust.
Identities = 175/300 (58%), Positives = 231/300 (77%)
Query: 8 PLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHV 67
P+L P RF +FPI++ +W +YKKA+ S WTAEE+D S+D+ W L+ +EKHF+ ++
Sbjct: 74 PMLLPTLSRFTVFPIKHENLWSLYKKAQMSNWTAEEIDFSKDMDDWNGLSDNEKHFIKYI 133
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
LAFFA SDGIV EN+ F E+Q+ EAR+FY +Q E +H E YS L++ YIK S EK
Sbjct: 134 LAFFAGSDGIVFENINNNFADEIQLTEARSFYAYQAHNEMVHGETYSKLIDKYIKSSTEK 193
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
N+LF AI+T+PC+ +KA WA+ W D FAERL+AFACVEGIFFSGSFCAI+WLKKRGL
Sbjct: 194 NQLFEAIQTIPCIERKAKWAMKWFDKKRPFAERLLAFACVEGIFFSGSFCAIYWLKKRGL 253
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
+PGL FSNELISRDEG+H +FA L+++L+ K S E ++ ++++AV IE+EF+ DALPC+
Sbjct: 254 LPGLCFSNELISRDEGMHQEFAVELFNMLKNKPSGEIIEEIIRDAVTIEKEFITDALPCS 313
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN MS+YIE+VADRL +G+ K++ NPFD+ME ISL GKTNFFEKRVG+Y K
Sbjct: 314 LIGMNSSKMSEYIEYVADRLSKQVGHDKIWNTKNPFDFMENISLDGKTNFFEKRVGDYGK 373
>gi|322510501|gb|ADX05815.1| putative ribonucleotide reductase small subunit [Organic Lake
phycodnavirus 1]
Length = 324
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/309 (60%), Positives = 241/309 (77%), Gaps = 1/309 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M EPLL + +RF MFPI IW+MYKK FW AEE+D S+DL HW L +E
Sbjct: 1 MSKKINEPLLTEDDNRFVMFPIVDEAIWKMYKKQVDCFWRAEEIDTSKDLNHWNKLQPEE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
++++ +LAFFA+SDGIVLENL RFM EVQ++EARAFYGFQIA+ENIHSE YSLL+++Y
Sbjct: 61 QYYIKMILAFFASSDGIVLENLGLRFMNEVQLSEARAFYGFQIAMENIHSETYSLLIDSY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IKD +EKN+LFH++E PC+ KK WA+ WI D F+ RL+AFACVEGIFFSG+FC+I
Sbjct: 121 IKDENEKNKLFHSLEHFPCIEKKGKWAMKWINDKKSNFSTRLVAFACVEGIFFSGAFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
+WLKKRG+MPGLTFSNELISRDE LH +FA L+ L K+++++++ +++EAV IE+EF
Sbjct: 181 YWLKKRGIMPGLTFSNELISRDEALHTEFAVHLFHKLEKKINKKKIREIIEEAVVIEKEF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ ++LPC L+GMN +LM+QYIE+VADRL+ LG ++Y NPFD+MELISL+ KTNFFE
Sbjct: 241 IVESLPCRLIGMNSDLMTQYIEYVADRLMIQLGCEEIYRTNNPFDFMELISLEQKTNFFE 300
Query: 300 KRVGEYQKA 308
RV EY A
Sbjct: 301 SRVSEYSLA 309
>gi|448929397|gb|AGE52965.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CZ-2]
gi|448934571|gb|AGE58124.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus NW665.2]
Length = 326
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R + FPI+YP ++ MYKKA ++FWT EEV L+QD+ W + L
Sbjct: 1 MAIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
EKRV EYQ+ VM N ++VF +D DF
Sbjct: 301 EKRVSEYQRPGVM-----NPEDNVFDMDGDF 326
>gi|448928392|gb|AGE51963.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVM-1]
Length = 326
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R + FPI+YP ++ MYKKA ++FWT EEV L+QD+ W + L
Sbjct: 1 MTIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
E+RV EYQ+ VM N ++VF +D DF
Sbjct: 301 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 326
>gi|448927342|gb|AGE50916.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVB-1]
Length = 326
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R F FPI++P I+ MYKKA ++FWT EEV L+QD+ W + L
Sbjct: 1 MTIINKEPLLADIGNRKFSAFPIKFPDIFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
E+RV EYQ+ VM N ++VF +D DF
Sbjct: 301 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 326
>gi|155370749|ref|YP_001426283.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
virus FR483]
gi|155124069|gb|ABT15936.1| hypothetical protein FR483_N651L [Paramecium bursaria Chlorella
virus FR483]
Length = 348
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R + FPI+YP ++ MYKKA ++FWT EEV L+QD+ W + L
Sbjct: 23 MAIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 82
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 83 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 142
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 143 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 202
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 203 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 262
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 263 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 322
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
E+RV EYQ+ VM N ++VF +D DF
Sbjct: 323 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 348
>gi|448925356|gb|AGE48936.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus AP110A]
gi|448935661|gb|AGE59211.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus OR0704.2.2]
Length = 326
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/331 (57%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R + FPI+YP ++ MYKKA ++FWT EEV L+QD+ W + L
Sbjct: 1 MAIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
E+RV EYQ+ VM N ++VF +D DF
Sbjct: 301 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 326
>gi|448927709|gb|AGE51282.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVG-1]
Length = 326
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R + FPI+YP ++ MYKKA ++FWT EEV L+QD+ W + L
Sbjct: 1 MAIINQEPLLADIGNRKYSAFPIKYPDVFGMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
EKRV EYQ+ VM N ++VF +D DF
Sbjct: 301 EKRVSEYQRPGVM-----NPEDNVFDMDGDF 326
>gi|448926378|gb|AGE49955.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus Can18-4]
Length = 359
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R + FPI+YP ++ MYKKA ++FWT EEV L+QD+ W + L
Sbjct: 34 MAIINQEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 93
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 94 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 153
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 154 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 213
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 214 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 273
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 274 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 333
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
EKRV EYQ+ VM N ++VF +D DF
Sbjct: 334 EKRVSEYQRPGVM-----NPEDNVFDMDGDF 359
>gi|448931953|gb|AGE55513.1| ribonucleoside-diphosphate reductase small subunit [Acanthocystis
turfacea Chlorella virus MN0810.1]
Length = 325
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 238/325 (73%), Gaps = 7/325 (2%)
Query: 7 EPLLAP-NPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFV 64
EPLLA ++ FPI+YP I++MYKKA A+FWT EEV L+QD+ W E L DE+HF+
Sbjct: 6 EPLLADIGARKYSAFPIRYPDIFQMYKKAVATFWTVEEVQLNQDVVDWREKLNDDERHFI 65
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
H+L FFA SDG+V+ENL F EV AR FY +Q E++HSE YSLLL+ I+D
Sbjct: 66 KHILGFFAGSDGMVMENLNNNFAEEVTDPSARMFYAYQAFNESVHSEQYSLLLDALIEDE 125
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N+LF AIET+P V KKA WA + +FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 AERNQLFEAIETIPAVGKKAAWAAKYFSRDRSFAERLVAWVCVEGLLFSGSFCAIFWLRN 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RG+MPGL SNE ISRDEGLH F LLYS L KLS + VK++V+EAV E++F+CDA+
Sbjct: 186 RGIMPGLGLSNEFISRDEGLHQQFGELLYSKLEKKLSLDVVKSIVEEAVANEKDFICDAI 245
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC ++GMN +LMS YIEFVADR+ ALGY K +G NPFD+MELISL+GK+NFFE+RV E
Sbjct: 246 PCRMIGMNSDLMSAYIEFVADRIFIALGYPKQFGAENPFDFMELISLEGKSNFFERRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VM N ++VF +D DF
Sbjct: 306 YQKAGVM-----NAEDNVFALDGDF 325
>gi|157952945|ref|YP_001497837.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123172|gb|ABT15040.1| hypothetical protein NY2A_B641R [Paramecium bursaria Chlorella
virus NY2A]
Length = 324
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/326 (57%), Positives = 236/326 (72%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EP+L+ N R F FPIQY +W MYKKA A+FWT EEV L+ D+ W E L DE+HF
Sbjct: 4 QEPILSDNGSRKFSAFPIQYHDLWNMYKKAVATFWTTEEVPLNADVADWREKLNNDERHF 63
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ H+L FFA SDGIV+ENL F EV EAR FY +Q E++HSEMY+LL++ I D
Sbjct: 64 IKHILGFFAGSDGIVMENLQTNFGVEVMAPEARQFYAYQTFNESVHSEMYALLIDALISD 123
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+ LF AIET+P V KA WA W+ +FAERL+A+ CVEGI FSGSFCA+FWL+
Sbjct: 124 EQERLDLFDAIETIPAVHNKAKWAQKWLKPERSFAERLVAWICVEGILFSGSFCALFWLR 183
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+G+MPGL SNE ISRDEGLH F L+YS L+ KLS E +K ++ EAV E+EF+CDA
Sbjct: 184 NKGVMPGLCLSNEFISRDEGLHQQFGELMYSKLQNKLSFETIKQIIMEAVTNEKEFICDA 243
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC+++GMN +LM+QYIEFVADR+ ALGY K+Y NPF +MELISL+GKTNFFEKRV
Sbjct: 244 IPCSMIGMNADLMNQYIEFVADRIFTALGYEKVYNSKNPFAFMELISLEGKTNFFEKRVS 303
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQ+ VM N +++F ID+DF
Sbjct: 304 DYQRPGVM-----NPEDNIFAIDDDF 324
>gi|448929743|gb|AGE53310.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus Fr5L]
Length = 326
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/331 (57%), Positives = 242/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R + FPI+YP ++ MYKKA +FWT EEV L+QD+ W + L
Sbjct: 1 MAIINKEPLLADIGNRKYSAFPIKYPDVFAMYKKAVTTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
EKRV EYQ+ VM N ++VF +D DF
Sbjct: 301 EKRVSEYQRPGVM-----NPEDNVFDMDGDF 326
>gi|431901752|gb|ELK08629.1| Ribonucleoside-diphosphate reductase subunit M2 B [Pteropus alecto]
Length = 318
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/325 (60%), Positives = 234/325 (72%), Gaps = 33/325 (10%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 26 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 85
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL+ TYI+D
Sbjct: 86 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIHTYIRDPK 145
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+AIET+P V KKA WAL WI D TF
Sbjct: 146 KRDFLFNAIETMPYVKKKADWALRWIADRKSTF--------------------------- 178
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 179 -GLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREVIVNAVEIEQEFLTEAL 237
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 238 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKIFHAENPFDFMENISLEGKTNFFEKRVSE 297
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 298 YQRFAVMAETTDN----VFTLDADF 318
>gi|242012701|ref|XP_002427066.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
[Pediculus humanus corporis]
gi|212511324|gb|EEB14328.1| Ribonucleoside-diphosphate reductase M2 subunit, putative
[Pediculus humanus corporis]
Length = 304
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/271 (69%), Positives = 221/271 (81%), Gaps = 1/271 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL N RF +FPI++P IW MYKKAEASFWT EEVDLS+DL HWE L E+HF++H
Sbjct: 32 EPLLKENIKRFVIFPIEFPDIWHMYKKAEASFWTVEEVDLSKDLEHWERLKPSERHFISH 91
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV+EAR FYGFQIA+EN+HSEMYSLL++TYIK+ E
Sbjct: 92 VLAFFAASDGIVNENLVERFSQEVQVSEARCFYGFQIAMENVHSEMYSLLIDTYIKNPTE 151
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K+ LF+AIET+PCV KKA WAL WI + TFAER++AFA VEGIFFSGSF AIFWLKKR
Sbjct: 152 KHFLFNAIETMPCVKKKADWALKWISHKTATFAERVVAFAAVEGIFFSGSFAAIFWLKKR 211
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ + K +E+ + ++K+AV IE+EF+ +ALP
Sbjct: 212 GLMPGLTFSNELISRDEGLHCDFACLMFKYVVQKPTEDEICDIIKDAVAIEQEFLTEALP 271
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKL 276
L+GMN LM +YIEFVADRLL LG K+
Sbjct: 272 VNLIGMNCSLMKKYIEFVADRLLVELGCKKV 302
>gi|448927042|gb|AGE50617.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVA-1]
gi|448928726|gb|AGE52296.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus CVR-1]
Length = 326
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/331 (57%), Positives = 243/331 (73%), Gaps = 7/331 (2%)
Query: 1 MPSIPEEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTA 58
M I +EPLLA +R + FPI++P ++ MYKKA ++FWT EEV L+QD+ W + L
Sbjct: 1 MAIINKEPLLADIGNRKYSAFPIKFPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLND 60
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
DE+HF+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+
Sbjct: 61 DERHFIKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLD 120
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
I+D E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCA
Sbjct: 121 ALIEDDAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+E
Sbjct: 181 IFWLRNRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKE 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F+C+A+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFF
Sbjct: 241 FICEAIPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFF 300
Query: 299 EKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
E+RV EYQ+ VM N ++VF +D DF
Sbjct: 301 ERRVSEYQRPGVM-----NAEDNVFDMDGDF 326
>gi|155122339|gb|ABT14207.1| hypothetical protein MT325_M653L [Paramecium bursaria chlorella
virus MT325]
Length = 326
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 241/326 (73%), Gaps = 7/326 (2%)
Query: 6 EEPLLAPNPDR-FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHF 63
+EPLLA +R + FPI+YP ++ MYKKA ++FWT EEV L+QD+ W + L DE+HF
Sbjct: 6 QEPLLADIGNRKYSAFPIKYPDVFAMYKKAVSTFWTVEEVPLNQDIADWRDKLNDDERHF 65
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ +L FFA SDG+V+EN+A F TEV AR FY +Q+ E+IHSEMYSLLL+ I+D
Sbjct: 66 IKTILGFFAGSDGMVMENIANNFSTEVTDPSARLFYAYQMFNESIHSEMYSLLLDALIED 125
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E+N LF AIET+P V KKA WA ++ ++FAERL+A+ CVEG+ FSGSFCAIFWL+
Sbjct: 126 DAERNSLFDAIETIPAVGKKAAWAQKFLSQDKSFAERLVAWVCVEGLLFSGSFCAIFWLR 185
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
RG+MPGL SNE ISRDEGLH F LLYS L KLS +VKA+V+EAV E+EF+C+A
Sbjct: 186 NRGVMPGLGLSNEFISRDEGLHQQFGELLYSKLENKLSLAQVKAIVEEAVANEKEFICEA 245
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+PC ++GMN ELM QY+EFVADR+ ALG+ K Y NPFD+MELISL+GK+NFFE+RV
Sbjct: 246 IPCRMIGMNSELMGQYLEFVADRIFVALGHPKQYNATNPFDFMELISLEGKSNFFERRVS 305
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
EYQ+ VM N ++VF +D DF
Sbjct: 306 EYQRPGVM-----NAEDNVFDMDGDF 326
>gi|297265423|ref|XP_001091447.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Macaca
mulatta]
Length = 704
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/329 (60%), Positives = 234/329 (71%), Gaps = 35/329 (10%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 410 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 469
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 470 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 529
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 530 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 589
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDE V + +
Sbjct: 590 WLKKRGLMPGLTFSNELISRDE------------------------------VSLNQIIG 619
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 620 XXXXXXXXIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 679
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 680 RVGEYQRMGVMSSPTENS----FTLDADF 704
>gi|370703011|ref|YP_004956813.1| orf65 gene product [Helicoverpa zea nudivirus 2]
gi|22671540|gb|AAN04367.1|AF451898_72 Rr2 [Heliothis zea virus 1]
gi|365199608|gb|AEW69614.1| ribonuclease reductase [Helicoverpa zea nudivirus 2]
Length = 333
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/329 (59%), Positives = 244/329 (74%), Gaps = 14/329 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
EEP RF +FPI+Y IWEMYKKA+ASFWT EEVDLS+DL WE LT E+ F+
Sbjct: 14 EEP-----SSRFTLFPIRYHDIWEMYKKAQASFWTVEEVDLSKDLYDWETRLTETEREFI 68
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+H+LAFFA SDGIV +NL RF E+ + E FYGFQI IEN+HSEMYS L++ YI+D
Sbjct: 69 SHILAFFAGSDGIVNDNLLTRFSQELTIPEVSCFYGFQIMIENVHSEMYSTLIDMYIRDP 128
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLK 183
K+ LF+AI+TVP + KKA W + WID + ++A+RL+AFA VEGIFFSGSF AIFWLK
Sbjct: 129 QRKHMLFNAIDTVPSIRKKAQWVIRWIDDDKSSYADRLVAFAAVEGIFFSGSFAAIFWLK 188
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLY-SLLR--TKLSEERVKALVKEAVEIEREFV 240
KRGLMPGLT SNE ISRDEGLHCDFA LL+ + LR + S+E+V +V +AV IE+EF+
Sbjct: 189 KRGLMPGLTHSNEFISRDEGLHCDFAILLFRNYLRPECRSSDEKVINIVTDAVRIEQEFL 248
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
++LP +++GMN +LM +YIEFVADRLL L K+Y NPFD+M ISL+GKTNFFEK
Sbjct: 249 TESLPVSMIGMNCKLMCEYIEFVADRLLYELIGRKIYNAKNPFDFMTSISLEGKTNFFEK 308
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+V EY++ V +L N VFKI EDF
Sbjct: 309 KVSEYKRYGVGVNLEDN----VFKISEDF 333
>gi|282174133|ref|YP_003358235.1| ribonucleotide reductase subunit 2 [Anguillid herpesvirus 1]
gi|281308976|gb|ADA57859.1| ribonucleotide reductase subunit 2 [Anguillid herpesvirus 1]
Length = 328
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 194/326 (59%), Positives = 237/326 (72%), Gaps = 7/326 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EPLL P +R FPI+ IW MYK A+A+ W+AEEVDL+QD+ HWE L DE+HF++
Sbjct: 7 EPLLDPANNRDVTFPIREHAIWAMYKTAQAANWSAEEVDLAQDVTHWEKRLNKDERHFIS 66
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAA+DG+V NL RF EVQ EA FY FQ+AIEN+H+EMYS L+ T IKD
Sbjct: 67 HVLAFFAAADGLVNANLGQRFTQEVQYLEATYFYNFQMAIENVHAEMYSKLIATLIKDVK 126
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E++RLF+A+E +PC+AKKA WA W D + +F ERL+AFA VEGIFFSG+F AIFWLK
Sbjct: 127 EQDRLFNAVERMPCIAKKAEWAKRWTHDTNASFGERLVAFAAVEGIFFSGAFAAIFWLKP 186
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDA 243
RG+MPGL SNE ISRDEGLHCDFACLL+ + K ERV +V EAVEIE+EF+ +A
Sbjct: 187 RGIMPGLIMSNEFISRDEGLHCDFACLLFKDHILGKPGYERVSQIVTEAVEIEKEFLSEA 246
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP L+G+N E M YIEFVADRLL ALG+ K Y V NPF +ME IS++GKTNFFEK V
Sbjct: 247 LPVRLLGINCEQMCSYIEFVADRLLAALGFPKRYHVKNPFGFMESISMEGKTNFFEKNVS 306
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+Y+K + + F IDEDF
Sbjct: 307 QYKK----FTFSDKDDKTCFSIDEDF 328
>gi|312075738|ref|XP_003140550.1| ribonucleotide reductase M2 B [Loa loa]
Length = 350
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/324 (61%), Positives = 235/324 (72%), Gaps = 20/324 (6%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LLA NP+RF +FPI++ IW+ YKKA ASFWT +EVDLS+D R WE L E+HF++
Sbjct: 46 EILLAENPNRFVIFPIKFHDIWDFYKKALASFWTVDEVDLSKDYRDWENLNDGERHFISR 105
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEM
Sbjct: 106 VLAFFAASDGIVNENLVNRFSQEVQVPEARFFYGFQIMIENVHSEM-------------- 151
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ LF+AI V KKA WAL WI D +AERLIAFA VEGIFFSGSF AIFWLKKR
Sbjct: 152 -SLLFNAIYEFEFVKKKADWALCWIADIKAPYAERLIAFAAVEGIFFSGSFAAIFWLKKR 210
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLT SNELISRDEGLH DFACLLY+ ++ K SEER+ +++EAV+IE+E++ +ALP
Sbjct: 211 GLMPGLTHSNELISRDEGLHRDFACLLYTYIKNKPSEERIYQIIREAVDIEKEYLTEALP 270
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+G+N +LM QYIE+VAD LL L K+Y NPFD+ME IS++ KTNFFEKRV EY
Sbjct: 271 VDLIGINCKLMCQYIEYVADHLLTELHCAKMYYSDNPFDFMERISIEAKTNFFEKRVSEY 330
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA V+ S G FK+D DF
Sbjct: 331 QKAGVLCSEEGKS----FKLDSDF 350
>gi|47213103|emb|CAF89523.1| unnamed protein product [Tetraodon nigroviridis]
Length = 407
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/288 (63%), Positives = 223/288 (77%), Gaps = 18/288 (6%)
Query: 43 EVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQ 102
+VDLS+DL+HWE+L DE+ F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQ
Sbjct: 137 QVDLSKDLQHWESLKDDERFFISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQ 196
Query: 103 IAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERL 161
IA+ENIHSEMYSLL++TYIK+ E+ LF+AIET+PCV KKA WALNWI + ++ ER+
Sbjct: 197 IAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKKKADWALNWIGNQKASYGERV 256
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS 221
+AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K S
Sbjct: 257 VAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPS 316
Query: 222 EERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVAN 281
+ V A+++ AVEIE+EF+ +ALP L+GMN +LM +YIEF+ Y N
Sbjct: 317 AQTVGAIIRNAVEIEQEFLTEALPVKLIGMNCQLMKRYIEFI-------------YRAEN 363
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
PFD+ME ISL+GKTNFFEKRVGEYQ+ VM+ ++ F++D DF
Sbjct: 364 PFDFMENISLEGKTNFFEKRVGEYQRMGVMAG----AADNTFRLDADF 407
>gi|310831442|ref|YP_003970085.1| putative ribonucleoside-diphosphate reductase small subunit
[Cafeteria roenbergensis virus BV-PW1]
gi|309386626|gb|ADO67486.1| putative ribonucleoside-diphosphate reductase small subunit
[Cafeteria roenbergensis virus BV-PW1]
Length = 326
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 168/323 (52%), Positives = 234/323 (72%), Gaps = 4/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL R+ +FPI+Y +IW++YKK EA+FWTAEE+D S+D ++ L DE+ F+ +
Sbjct: 8 EELLKSENSRYTVFPIKYHKIWDLYKKMEAAFWTAEEIDWSKDKHDFKKLNQDEQRFIKY 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFF+ASD IV NL R EVQ EA+ Y FQ+ +E IHSE+Y+L ++ I+D E
Sbjct: 68 VLAFFSASDTIVNINLGERLSHEVQPLEAKIAYTFQMMMEGIHSEVYALQIDNIIEDVQE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ + ++IETVPC+ K W L W+ E+FA R++A EG+FFSGSFCAIFWLK +
Sbjct: 128 RKDILNSIETVPCIKAKTDWMLKWVKSEESFATRMVAQVISEGLFFSGSFCAIFWLKNKN 187
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+MPGL SNELI+RDEG+HCD++ +LY +L+ KLS+E+++ + K+AVE ER F+C++LPC
Sbjct: 188 IMPGLISSNELIARDEGMHCDYSIMLYHMLQNKLSQEKIQQMFKDAVETERIFICESLPC 247
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+L+GMN +LM QYI+FVAD+L+ LGY K++ V NPF WME IS++GKTNFFE R +YQ
Sbjct: 248 SLLGMNADLMEQYIKFVADQLIIKLGYNKIFKVDNPFTWMEAISIEGKTNFFEHRPTQYQ 307
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
+A V N + N F+I +DF
Sbjct: 308 RADV----NNHTKNQAFEISDDF 326
>gi|395849989|ref|XP_003797586.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase subunit M2 B-like [Otolemur garnettii]
Length = 615
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/325 (59%), Positives = 235/325 (72%), Gaps = 12/325 (3%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + +F IQYP W+ YK+ +ASFWTAEEVDLS+DL HW L +DEK++V+
Sbjct: 296 EEPLLRKSSRHCVIFAIQYPDTWKTYKQEQASFWTAEEVDLSKDLPHWNKLKSDEKYWVS 355
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGI+ EN+ EVQV E QI IEN+HSEMYSLL +TYI D
Sbjct: 356 HILAFFAASDGIINENVVXS--QEVQVPEVX-----QILIENVHSEMYSLLTDTYIXDPK 408
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+ IET+PCV KKA W L WI D T ER++AFA VE IFFSGSF AIF LKK
Sbjct: 409 KRDFLFNVIETMPCVQKKADWTLXWIADIKSTLGERVVAFAAVERIFFSGSFAAIFXLKK 468
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
R LM GLTFSNELISRDEGLHCDFA L++ K SEERV+ ++ EAV+IE+EF+ +AL
Sbjct: 469 RVLMSGLTFSNELISRDEGLHCDFAYLIFXYFVNKPSEERVREIIIEAVKIEQEFLTEAL 528
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P LVGMN LM+QY EFVA+RLL LG+ K++ NPFD+ME ISLQGKTNFFEK + E
Sbjct: 529 PVVLVGMNCILMTQYTEFVANRLLVELGFSKVFQAENPFDFMENISLQGKTNFFEKXISE 588
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ ++M+ N VF ++ DF
Sbjct: 589 YQHFAIMAETIDN----VFTLNADF 609
>gi|356506867|ref|XP_003522196.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 258
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/241 (72%), Positives = 198/241 (82%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
+P I EEPLLAPNPDRFCMFPIQ+ QIWEMYKK +A+FW EEVDLSQDL HW L+ E
Sbjct: 11 LPKITEEPLLAPNPDRFCMFPIQFLQIWEMYKKVKAAFWIMEEVDLSQDLCHWATLSDGE 70
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ F+THVLAFF ASDGIVLENLAGRF E+Q+ EARAFYGFQI I+NIHSEMY+LLLETY
Sbjct: 71 RPFITHVLAFFTASDGIVLENLAGRFTKEIQLPEARAFYGFQITIKNIHSEMYNLLLETY 130
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IK S + NRLF AI T+PC+ KKA WAL WID SE+F E L+AFACV+ GSFC F
Sbjct: 131 IKYSTKNNRLFRAINTIPCIIKKAQWALRWIDASESFVECLMAFACVKEXILLGSFCVTF 190
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLM GLTFSN+LI RD GLHCDF CLLYSLL+ KLSEERV+ ++ + VEIER+FV
Sbjct: 191 WLKKRGLMSGLTFSNKLILRDWGLHCDFMCLLYSLLQKKLSEERVREIMHDVVEIERKFV 250
Query: 241 C 241
C
Sbjct: 251 C 251
>gi|269862698|ref|XP_002650940.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220065381|gb|EED43116.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 332
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 177/281 (62%), Positives = 218/281 (77%), Gaps = 2/281 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL R+ +FPIQYP+IWE YK E++FWT EEVD++ D H+ LT +E+ F+ +
Sbjct: 54 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 113
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I+D +E
Sbjct: 114 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 173
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF+AIE +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 174 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 233
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + K + ++ +V+EAV IE+EF+ ++LP
Sbjct: 234 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 291
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
+L+GMN +LM QYIEFVADRLL ALG K+Y V+ PFD+ME
Sbjct: 292 SLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSTPFDFME 332
>gi|349603084|gb|AEP99024.1| Ribonucleoside-diphosphate reductase subunit M2-like protein,
partial [Equus caballus]
Length = 261
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/265 (69%), Positives = 212/265 (80%), Gaps = 5/265 (1%)
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKDS
Sbjct: 1 HVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDSK 60
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 61 EREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKK 120
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+ +AL
Sbjct: 121 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFLTEAL 180
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 181 PVRLIGMNCALMKQYIEFVADRLLLELGFNKVFRVENPFDFMENISLEGKTNFFEKRVGE 240
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VMSS N F +D DF
Sbjct: 241 YQRMGVMSSPTENS----FTLDADF 261
>gi|67906414|gb|AAY82584.1| ribonucleotide reductase subunit 2 [Carassius carassius]
Length = 246
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/246 (71%), Positives = 206/246 (83%), Gaps = 1/246 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++F++H
Sbjct: 1 EPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERYFISH 60
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E
Sbjct: 61 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPKE 120
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 121 RDFLFNAIETMPCVKKKADWALNWIGDKNAQYGERVVAFAAVEGIFFSGSFASIFWLKKR 180
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACL++ L K SEE VK ++ AV IE+EF+ DALP
Sbjct: 181 GLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEETVKKIIVNAVAIEQEFLTDALP 240
Query: 246 CALVGM 251
L+GM
Sbjct: 241 VKLIGM 246
>gi|443893923|dbj|GAC71111.1| ribonucleotide reductase, beta subunit [Pseudozyma antarctica T-34]
Length = 280
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/277 (64%), Positives = 219/277 (79%), Gaps = 2/277 (0%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMT 88
MYKKAEASFWTAEE+DLS+DL W+ L +E+HF++HVLAFFAASDGIV ENL RF +
Sbjct: 1 MYKKAEASFWTAEEIDLSKDLHDWDNKLNDNERHFISHVLAFFAASDGIVNENLVERFSS 60
Query: 89 EVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWAL 148
EVQ AEAR FYGFQI +ENIHSE YSLL++TYI++ +++ LF A+ET+P V KKA WAL
Sbjct: 61 EVQAAEARCFYGFQIMMENIHSETYSLLIDTYIREPEQRELLFDAVETIPVVKKKADWAL 120
Query: 149 NWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 207
WI D TFAERL+AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLH D
Sbjct: 121 RWISDRRATFAERLVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHTD 180
Query: 208 FACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRL 267
FACLL+S L+ + + V ++ EAVEIE++F+ +ALPC+L+GMN +LM QYIE+VADRL
Sbjct: 181 FACLLFSHLKKRAHPDTVLKIITEAVEIEQKFLSEALPCSLIGMNAKLMCQYIEYVADRL 240
Query: 268 LGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
L LG + NPFD+M+ ISL+GK + R E
Sbjct: 241 LTQLGNAPHFNSTNPFDFMDNISLEGKVSIHSFRALE 277
>gi|269865627|ref|XP_002651990.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063361|gb|EED42066.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 290
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/295 (61%), Positives = 224/295 (75%), Gaps = 7/295 (2%)
Query: 35 EASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAE 94
E++FWT EEVD++ D H+ LT +E+ F+ +VLAFFAASDGIV ENL RF +EVQ+ E
Sbjct: 3 ESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILE 62
Query: 95 ARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGS 154
A+ FYGFQIAIENIHSEMYS L+ET I+D +E+ LF+AIE +P + KKA WA WI
Sbjct: 63 AKMFYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASD 122
Query: 155 ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 214
+F R +AFACVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+
Sbjct: 123 TSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHK 182
Query: 215 LLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYG 274
+ K + ++ +V+EAV IE+EF+ ++LP +L+GMN +LM QYIEFVADRLL ALG
Sbjct: 183 YINNKCT--VIEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEK 240
Query: 275 KLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
K+Y V+NPFD+ME ISLQGKTNFFE+R YQK V G F ++E+F
Sbjct: 241 KIYNVSNPFDFMENISLQGKTNFFERRETNYQKGYV-----GIDNEFKFNLNENF 290
>gi|417659|sp|P32209.1|RIR2_SWPVK RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|347472|gb|AAC37857.1| ribonucleotide reductase [Swinepox virus]
Length = 274
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 215/269 (79%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L + RF +FPI+Y IW+MYK++ ASFWT EEVDLS+DL W+ LT DEK+F+ H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA+SDGIV ENLA RF +VQ +EAR FYGFQIA+ENIHSEMYSLL++TY++D+ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF+AIET+ CV KKA WA WI ++ + ER++AFA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L S+E + +++ +AV IE+EF+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGK 275
L+GMN LMSQYIEFVADRLL LG K
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEK 270
>gi|116326775|ref|YP_803312.1| hypothetical protein TNAV2c_gp089 [Trichoplusia ni ascovirus 2c]
gi|102231783|gb|ABF70606.1| hypothetical protein [Trichoplusia ni ascovirus 2c]
Length = 269
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/254 (69%), Positives = 205/254 (80%), Gaps = 1/254 (0%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTE 89
MYKKAEASFWT EEVDLS+DL W+ L DEKHF+ H+LAFFAASDGIV ENL RF E
Sbjct: 1 MYKKAEASFWTVEEVDLSKDLSDWDKLKDDEKHFIKHILAFFAASDGIVNENLVERFSQE 60
Query: 90 VQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALN 149
VQ+ EAR FYGFQIA+EN+HSEMYSLL++TYI+DSDE++ LF+AIET+PC+ KKA WAL
Sbjct: 61 VQITEARCFYGFQIAMENVHSEMYSLLIDTYIRDSDERDYLFNAIETLPCIKKKADWALK 120
Query: 150 WI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
WI S FAER++AFA VEGIFFSGSF +IFWLKKRGL+PGLTFSNELISRDEGLH DF
Sbjct: 121 WISSNSANFAERIVAFAAVEGIFFSGSFASIFWLKKRGLLPGLTFSNELISRDEGLHTDF 180
Query: 209 ACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLL 268
ACL+Y+ + K RV ++KEAV IE++F+ DALP L+GMN +LMSQYIEFVADRLL
Sbjct: 181 ACLMYNYVVQKPPNSRVIEILKEAVVIEKDFLTDALPVRLLGMNCDLMSQYIEFVADRLL 240
Query: 269 GALGYGKLYGVANP 282
L K Y NP
Sbjct: 241 YELIGEKYYNAKNP 254
>gi|42565480|gb|AAS21007.1| ribonucleoside-diphosphate reductase R2 [Hyacinthus orientalis]
Length = 197
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 169/194 (87%), Positives = 182/194 (93%), Gaps = 4/194 (2%)
Query: 1 MPSIP----EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEAL 56
MPS+P EEPLLAPNPDRFCMFPI+YP+IWEMYKKAEASFWTAEEVDLSQD RHWEAL
Sbjct: 1 MPSVPSAVAEEPLLAPNPDRFCMFPIKYPEIWEMYKKAEASFWTAEEVDLSQDTRHWEAL 60
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
TADE+HF+THVLAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSEMYSLL
Sbjct: 61 TADERHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLL 120
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSF 176
LE+YIKD DEKNRLFHAIET+PCVAKKA WAL WIDG ++FA+R++AFACVEGIFFSG
Sbjct: 121 LESYIKDPDEKNRLFHAIETIPCVAKKAEWALRWIDGGKSFAQRVVAFACVEGIFFSGVS 180
Query: 177 CAIFWLKKRGLMPG 190
C+IFWLKKRGLMPG
Sbjct: 181 CSIFWLKKRGLMPG 194
>gi|429962574|gb|ELA42118.1| ribonucleoside-diphosphate reductase small chain, partial
[Vittaforma corneae ATCC 50505]
Length = 282
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 173/286 (60%), Positives = 221/286 (77%), Gaps = 4/286 (1%)
Query: 44 VDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQI 103
VD+ DL ++ LT DE+HF+ +VLAFFAASDGIV ENL RF +E+ EA+ FYGFQI
Sbjct: 1 VDIHNDLEDFDRLTKDEQHFIKYVLAFFAASDGIVNENLVERFSSEITNLEAKCFYGFQI 60
Query: 104 AIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIA 163
A+ENIHSEMYS L+ETYI+D DEKN LF++I+T+P +A+KA WA WI+ + F R+IA
Sbjct: 61 AMENIHSEMYSKLIETYIRDEDEKNFLFNSIKTIPSIARKAAWAKKWIESTTDFDTRMIA 120
Query: 164 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE 223
FACVEGIFFSG F AIFW+KKRGLMPGLTFSNELISRDE +H +FACLL+ + +K +
Sbjct: 121 FACVEGIFFSGCFAAIFWIKKRGLMPGLTFSNELISRDEAVHTEFACLLHKHIVSKCT-- 178
Query: 224 RVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPF 283
R++ +V+EAVEIE++F+ ++LP +L+GMN LM QYIEFVADRLL LG K++ NPF
Sbjct: 179 RIRDIVREAVEIEKQFITESLPVSLIGMNCALMCQYIEFVADRLLYNLGEKKIFNAKNPF 238
Query: 284 DWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
D+ME ISL GKTNFF+K+ YQKA V + G+G + F+ D DF
Sbjct: 239 DFMENISLMGKTNFFDKKEANYQKAFV--GIKGDGESDSFRTDVDF 282
>gi|392558190|gb|EIW51392.1| putative ribonucleoside-diphosphate reductase small chain B
[Trametes versicolor FP-101664 SS1]
Length = 331
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/315 (54%), Positives = 225/315 (71%), Gaps = 2/315 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTAD 59
M + + +L P+ RF ++PI+YP+IW+ YK A+ASFWTA+E+DLS D+RHW LT +
Sbjct: 1 MTTPTNDAILKPSTSRFILYPIKYPEIWDAYKTAQASFWTADEIDLSADVRHWTCRLTDE 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+ F++ +LAFFAASDG+V ENL RF EVQ+ EAR FYGFQI +ENIH+E Y+ +L T
Sbjct: 61 ERAFISILLAFFAASDGMVNENLLERFCAEVQIPEARCFYGFQIMMENIHAETYASMLTT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCA 178
I+D+ E++RLF A T+P + KA W + WI D + FA RLIAFA VEGIFFS SF A
Sbjct: 121 LIQDNAERDRLFSATSTIPAIKAKAEWTMRWIEDKHQPFAVRLIAFAAVEGIFFSSSFAA 180
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
IFWL+ RGL+PG+ SNELI+RDE +H FACLLYS L+T+ + V+A+++EAV +E+
Sbjct: 181 IFWLRSRGLLPGICHSNELIARDESMHTMFACLLYSQLQTRAPKATVRAVIREAVALEKS 240
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F DALP L GMN ELM Y+E VAD LL LG +Y NPF ++ +L G+TNFF
Sbjct: 241 FFADALPTRLAGMNTELMGDYVEAVADDLLRRLGCRPIYDKENPFPFITSSALDGRTNFF 300
Query: 299 EKRVGEYQKASVMSS 313
E+RV EY S M S
Sbjct: 301 ERRVSEYSAVSHMHS 315
>gi|432951682|ref|XP_004084883.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Oryzias latipes]
Length = 265
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/246 (69%), Positives = 199/246 (80%), Gaps = 1/246 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FP+QY IW+MYKKAEASFWTAEEVDLS+DL+HWE L DE+ F++
Sbjct: 18 EEPLLKENPRRFVIFPVQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWETLKDDERFFIS 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD
Sbjct: 78 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPK 137
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV +KA WALNWI + ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 138 EREYLFNAIETLPCVKRKADWALNWIGNKHAAYGERVVAFAAVEGIFFSGSFAAIFWLKK 197
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K S E V +++ AVEIE+EF+ +AL
Sbjct: 198 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSSETVTEIIRNAVEIEQEFLTEAL 257
Query: 245 PCALVG 250
++
Sbjct: 258 NSEIIA 263
>gi|269865122|ref|XP_002651812.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063829|gb|EED42244.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 336
Score = 356 bits (914), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 171/271 (63%), Positives = 210/271 (77%), Gaps = 2/271 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL R+ +FPIQYP+IWE YK E++FWT EEVD++ D H+ LT +E+ F+ +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I+D +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF+AIE +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 205
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLH DFACLL+ + K + ++ +V+EAV IE+EF+ ++LP
Sbjct: 206 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPV 263
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLY 277
+L+GMN +LM QYIEFVADRLL ALG K+Y
Sbjct: 264 SLIGMNCKLMCQYIEFVADRLLFALGERKIY 294
>gi|328722535|ref|XP_001944897.2| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Acyrthosiphon pisum]
Length = 345
Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 177/297 (59%), Positives = 212/297 (71%), Gaps = 1/297 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPI Y IW MYKK EAS W E V+L DL W +T +E+HF+++
Sbjct: 38 EPLLKDNPRRFVIFPIIYDNIWAMYKKHEASLWNIEAVNLKSDLEDWMRMTDEERHFISY 97
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAF AAS+GIV ENL RF EVQV EAR FYGFQI IENIHSEMYSLL++TYIKD E
Sbjct: 98 ILAFLAASNGIVSENLVKRFSQEVQVTEARCFYGFQIMIENIHSEMYSLLIDTYIKDPKE 157
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K L +A ET+PCV K A W L WI D TF ERL+ FA V+GIF SG+ +I WL KR
Sbjct: 158 KETLINATETMPCVKKMADWVLKWITDSKATFGERLVTFAAVKGIFLSGNVPSITWLTKR 217
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLM GLTFSNELI RDEGLH DFACLL+ L K + ++ +AV IE+ F+ +AL
Sbjct: 218 GLMLGLTFSNELIFRDEGLHTDFACLLFKHLDQKPPLTVITHIICKAVTIEQYFLTNALL 277
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
+VGM+ E M++YIEFVADRLL LG +Y +NPF +M+L+S QGKTN FEKRV
Sbjct: 278 VKMVGMSCEKMAEYIEFVADRLLNELGCPAVYRSSNPFPFMDLLSQQGKTNGFEKRV 334
>gi|269864629|ref|XP_002651641.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220064151|gb|EED42415.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 277
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 175/284 (61%), Positives = 214/284 (75%), Gaps = 7/284 (2%)
Query: 46 LSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAI 105
++ D H+ LT +E+ F+ +VLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIAI
Sbjct: 1 MTFDCEHFSTLTPNEQFFIKYVLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAI 60
Query: 106 ENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFA 165
ENIHSEMYS L+ET I+D +E+ LF+AIE +P + KKA WA WI +F R +AFA
Sbjct: 61 ENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFA 120
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERV 225
CVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + K + +
Sbjct: 121 CVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VI 178
Query: 226 KALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDW 285
+ +V+EAV IE+EF+ ++LP +L+GMN +LM QYIEFVADRLL ALG K+Y V+NPFD+
Sbjct: 179 EDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDF 238
Query: 286 MELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
ME ISLQGKTNFFE+R YQK V G F ++EDF
Sbjct: 239 MENISLQGKTNFFERREANYQKGYV-----GIDNEFKFNLNEDF 277
>gi|292658982|gb|ADE34370.1| ribonucleotide reductase small chain [Turbot reddish body
iridovirus]
Length = 312
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 171/301 (56%), Positives = 220/301 (73%), Gaps = 5/301 (1%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+RHW + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAGRFMTEV-QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
+DGIV +NL F E+ + EARAFYGF++A+ENIH+EMY+ L+ T + ++ LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFRVAMENIHAEMYTQLIITLVAKENQA-ALFS 119
Query: 133 AIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + K S+E ++ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPSQEDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N + M YI+FVADRLL ALGY K+Y VANPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMRLYIQFVADRLLDALGYAKMYNVANPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 S 312
+
Sbjct: 300 T 300
>gi|17158292|ref|NP_477710.1| wsv188 [Shrimp white spot syndrome virus]
gi|14189948|gb|AAK55515.1|AF267731_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
virus]
gi|15021490|gb|AAK77767.1|AF369029_98 ORF98, putative ribonucleotide reductase small subunit (RR2)
[shrimp white spot syndrome virus]
gi|17016586|gb|AAL33192.1| wsv188 [shrimp white spot syndrome virus]
gi|19481835|gb|AAL89111.1| WSSV243 [shrimp white spot syndrome virus]
gi|417072416|gb|AFX59565.1| wsv188 [White spot syndrome virus]
Length = 413
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/308 (53%), Positives = 215/308 (69%), Gaps = 1/308 (0%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
L NP+RF PI + +WEMYKK A FWT EE+D +D + WE LT DEK F+ +L
Sbjct: 59 LTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQIL 118
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA+SDGIV+ENL R Q+ EAR+F+ FQ+ +E+IH +Y L++ + D +K
Sbjct: 119 AFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKA 178
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF+A + P + KK WA+NW+ + AE ++AFA VEGIFFSG+F +IFW+K RG++
Sbjct: 179 ILFNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGIL 238
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
PGLT SNE ISRDEGLH DFAC+L S ER+ +V EAV IE+EF+ +LP
Sbjct: 239 PGLTSSNEFISRDEGLHRDFACMLLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 298
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
LVGMN +LMSQYIEFVAD+LL +G K Y V NPF +M+ ISL+ KTNFFEKRV EYQ+
Sbjct: 299 LVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKRVAEYQR 358
Query: 308 ASVMSSLN 315
A VM+S+N
Sbjct: 359 AQVMASIN 366
>gi|19881429|ref|NP_612246.1| putative ribonucleotide reductase small subunit [Infectious spleen
and kidney necrosis virus]
gi|19773634|gb|AAL98748.1|AF371960_24 putative ribonucleotide reductase small subunit [infectious spleen
and kidney necrosis virus]
Length = 312
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/318 (54%), Positives = 226/318 (71%), Gaps = 10/318 (3%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAA 73
D++ + P P +W MYKKA ASFWT EEVDLS D+RHW E LT E+ F++H+LAFFA
Sbjct: 2 DKYVLRPSD-PHLWAMYKKAVASFWTVEEVDLSTDVRHWTEKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAGRFMTEVQ-VAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
+DGIV +NL F E+ + EARAFYGFQ+A+ENIH+EMY+ L+ T + ++ LF
Sbjct: 61 ADGIVGDNLVCNFAKELDYIPEARAFYGFQVAMENIHAEMYTQLIITLVAKENQA-ALFS 119
Query: 133 AIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + ++ A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKSIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + K ++ ++ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFQEALKTPLLGM 239
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N + M YI+FVADRLL ALGY K+Y VANPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMRLYIQFVADRLLDALGYAKMYNVANPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 SSLNGNGGNHVFKIDEDF 329
+ + F + EDF
Sbjct: 300 TP-----SSMEFTMTEDF 312
>gi|7672989|gb|AAF66689.1|AF144620_1 ribonucleotide reductase small subunit [shrimp white spot syndrome
virus]
Length = 413
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 166/308 (53%), Positives = 215/308 (69%), Gaps = 1/308 (0%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
L NP+RF PI + +WEMYKK A FWT EE+D +D + WE LT DEK F+ +L
Sbjct: 59 LTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQIL 118
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA+SDGIV+ENL R Q+ EAR+F+ FQ+ +E+IH +Y L++ + D +K
Sbjct: 119 AFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKA 178
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF+A + P + KK WA+NW+ + AE ++AFA VEGIFFSG+F +IFW+K RG++
Sbjct: 179 ILFNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGIL 238
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
PGLT SNE ISRDEGLH DFAC+L S ER+ +V EAV IE+EF+ +LP
Sbjct: 239 PGLTSSNEFISRDEGLHRDFACMLLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 298
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
LVGMN +LMSQYIEFVAD+LL +G K Y V NPF +M+ ISL+ KTNFFEKRV EYQ+
Sbjct: 299 LVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKRVAEYQR 358
Query: 308 ASVMSSLN 315
A VM+S+N
Sbjct: 359 AQVMASIN 366
>gi|358054708|dbj|GAA99634.1| hypothetical protein E5Q_06335 [Mixia osmundae IAM 14324]
Length = 549
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/338 (53%), Positives = 224/338 (66%), Gaps = 27/338 (7%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL +RF +FPI+Y +IW YK+A ASFWTAEE+DL+ D +E+LT E+HF+
Sbjct: 225 QEPLLQELDNRFVLFPIKYDEIWRFYKRAVASFWTAEEIDLTGDRADFESLTPGERHFIL 284
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF +EV+V EA+ FYGFQI +ENIHSE+YSLL+E Y++D
Sbjct: 285 HVLAFFAASDGIVNENLVERFSSEVKVTEAKCFYGFQIMMENIHSEVYSLLIEFYVRDKR 344
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E+ L + I F F G FFSGSF AIFWLKKR
Sbjct: 345 ERQALTLGTQVD-------------IRRPNDFCRATRRFCGCRGHFFSGSFAAIFWLKKR 391
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH +FACLL+ L + S+ RV+ ++ AV IE++F+ +ALP
Sbjct: 392 GLMPGLTFSNELISRDEGLHTEFACLLFRHLHHRPSDARVQEIITSAVTIEKDFLTEALP 451
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN + MSQYIE+VADRLL LG K+YG NP +ME ISL+GKTNFFEKRV +Y
Sbjct: 452 VKLIGMNSDTMSQYIEYVADRLLTTLGVEKVYGSENPLSFMENISLEGKTNFFEKRVSDY 511
Query: 306 ---------QKASVMSSLNGNGGNH-----VFKIDEDF 329
Q+AS + G H VF++D DF
Sbjct: 512 ARARMSGWTQEASGAGHADDTQGGHGNSEDVFRLDADF 549
>gi|62421216|gb|AAX82336.1| ribonucleotide reductase small chain [Orange-spotted grouper
iridovirus]
Length = 312
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/318 (54%), Positives = 225/318 (70%), Gaps = 10/318 (3%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+RHW + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAGRFMTEV-QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
+DGIV +NL F E+ + EARAFYGFQ+AIENIH+EMY+ L+ T + ++ LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQA-ALFS 119
Query: 133 AIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + K ++ ++ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHEIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N + M YI+FVADRLL ALGY K+Y V NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVGNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 SSLNGNGGNHVFKIDEDF 329
+ N F ++E+F
Sbjct: 300 TP-----SNMEFTMNEEF 312
>gi|27923845|sp|Q9QTF2.1|RIR2_RSIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|5688956|dbj|BAA82755.1| ribonucleotide reductase small subunit [Red sea bream iridovirus]
gi|327396894|dbj|BAK14260.1| ribonucleotide diphosphate reductase small subunit [Red sea bream
iridovirus]
Length = 312
Score = 347 bits (891), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 219/301 (72%), Gaps = 5/301 (1%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+RHW + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAGRFMTEV-QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
+DGIV +NL F E+ + EARAFYGFQ+AIENIH+EMY+ L+ T + ++ LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQA-ALFS 119
Query: 133 AIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + K ++ ++ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N + M YI+FVADRLL ALGY K+Y V+NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVSNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 S 312
+
Sbjct: 300 T 300
>gi|307171465|gb|EFN63309.1| Ribonucleoside-diphosphate reductase subunit M2 [Camponotus
floridanus]
Length = 343
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 178/276 (64%), Positives = 210/276 (76%), Gaps = 19/276 (6%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQ-DLRHWE-ALTADEK 61
PE EPLL P+RF +FPIQYP IW+MYKKA ASFWT EEV L + D + WE L +DE+
Sbjct: 59 PELEPLLQEGPNRFVIFPIQYPDIWDMYKKAVASFWTIEEVPLHKLDKKDWEEKLNSDER 118
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EV++AEAR FYGFQIAIENIHSEMYSLL+ETYI
Sbjct: 119 YFISHVLAFFAASDGIVNENLIERFSQEVKIAEARCFYGFQIAIENIHSEMYSLLIETYI 178
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
D EK+ LF+AIET+P V KKA WALNWI+ S TF ER++ AIF
Sbjct: 179 SDPKEKDFLFNAIETLPSVGKKANWALNWINHESATFPERVV---------------AIF 223
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRG+MPGLTFSNELISRDEGLHCDFACL++ + K S ERVK+++ +AVEIE+EF+
Sbjct: 224 WLKKRGVMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSFERVKSIIMDAVEIEQEFL 283
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKL 276
ALP L+GMN LM YIEFVADRL ALG+ K+
Sbjct: 284 TQALPVQLIGMNCTLMCSYIEFVADRLFVALGFEKV 319
>gi|260909050|gb|ACX54162.1| RR2 protein, partial [White spot syndrome virus]
gi|260909052|gb|ACX54163.1| RR2 protein, partial [White spot syndrome virus]
gi|260909054|gb|ACX54164.1| RR2 protein, partial [White spot syndrome virus]
gi|260909056|gb|ACX54165.1| RR2 protein, partial [White spot syndrome virus]
Length = 349
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 165/306 (53%), Positives = 213/306 (69%), Gaps = 1/306 (0%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
L NP+RF PI + +WEMYKK A FWT EE+D +D + WE LT DEK F+ +L
Sbjct: 44 LTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQIL 103
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA+SDGIV+ENL R Q+ EAR+F+ FQ+ +E+IH +Y L++ + D +K
Sbjct: 104 AFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKA 163
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF+A + P + KK WA+NW+ + AE ++AFA VEGIFFSG+F +IFW+K RG++
Sbjct: 164 ILFNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGIL 223
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
PGLT SNE ISRDEGLH DFAC+L S ER+ +V EAV IE+EF+ +LP
Sbjct: 224 PGLTSSNEFISRDEGLHRDFACMLLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 283
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
LVGMN +LMSQYIEFVAD+LL +G K Y V NPF +M+ ISL+ KTNFFEKRV EYQ+
Sbjct: 284 LVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKRVAEYQR 343
Query: 308 ASVMSS 313
A VM+S
Sbjct: 344 AQVMAS 349
>gi|193206379|ref|NP_500944.2| Protein F58F9.1 [Caenorhabditis elegans]
gi|373254185|emb|CCD67640.1| Protein F58F9.1 [Caenorhabditis elegans]
Length = 581
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/293 (58%), Positives = 209/293 (71%), Gaps = 19/293 (6%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLLAPN +RF + PI + IWE YKKA A FWT+EEVDL +D+ HWE LT+DE+ F++
Sbjct: 307 EPLLAPNNNRFVVHPIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFISS 366
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENL RF TEVQV EAR FYGFQIA+ENIHSEMY+ LLE YI+D E
Sbjct: 367 ILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAE 426
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+N LF+AI T + KA W L WI D + F+ERL A A VEGIFFS SF AIFWLKKR
Sbjct: 427 RNILFNAITTFKFIKAKADWCLRWISDHNAPFSERLAAVAAVEGIFFSSSFAAIFWLKKR 486
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GL+PGLT SNELISR K +E R+ ++ E+V +E++FV ++LP
Sbjct: 487 GLLPGLTHSNELISR------------------KPAESRITEIINESVLVEQDFVRESLP 528
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
L+GMN +M +Y+EFVAD LL LGY K Y N FD+ME IS++GKTNFF
Sbjct: 529 TNLIGMNQHMMCKYVEFVADLLLEELGYSKRYNTKNLFDFMENISIEGKTNFF 581
>gi|50237508|gb|AAT71841.1| ribonucleotide reductase small chain [Rock bream iridovirus]
Length = 312
Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 218/301 (72%), Gaps = 5/301 (1%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+RHW + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAGRFMTEV-QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
+DGIV +NL F E+ + EARAFYGFQ+A++NIH+EMY+ L+ T + ++ LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAMKNIHAEMYTQLIITLVAKENQA-ALFS 119
Query: 133 AIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + K ++ ++ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHEIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N + M YI+FVADRLL ALGY K+Y V NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVGNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 S 312
+
Sbjct: 300 T 300
>gi|397638244|gb|EJK72985.1| hypothetical protein THAOC_05425, partial [Thalassiosira oceanica]
Length = 235
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 168/234 (71%), Positives = 189/234 (80%), Gaps = 1/234 (0%)
Query: 44 VDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQI 103
+DL++DL+ W+ LT +E+HFV+H+LAFFAASDGIV ENL G F TEVQ AEAR FYGFQI
Sbjct: 1 IDLAEDLKDWDGLTNNERHFVSHILAFFAASDGIVNENLCGNFATEVQSAEARCFYGFQI 60
Query: 104 AIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLI 162
A+ENIHSE YSLL++TYIKD +K L +AIETVPCV KKA WAL W D +FAER I
Sbjct: 61 AVENIHSETYSLLIDTYIKDQADKMHLLNAIETVPCVQKKANWALKWCDSRHASFAERCI 120
Query: 163 AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE 222
AFA VEGIFFSGSFCAIFWLKKRGLMPGL FSNELISRDEGLHCDFACLLYS L K+ E
Sbjct: 121 AFAAVEGIFFSGSFCAIFWLKKRGLMPGLCFSNELISRDEGLHCDFACLLYSKLVNKVPE 180
Query: 223 ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKL 276
R+ +V AVEIE+EFV DALP L+GMN LM QYIEF ADRLL ALG K+
Sbjct: 181 SRIVEIVTHAVEIEKEFVVDALPVELIGMNSGLMCQYIEFCADRLLHALGCSKV 234
>gi|326483608|gb|EGE07618.1| hypothetical protein TEQG_06532 [Trichophyton equinum CBS 127.97]
Length = 317
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 194/242 (80%), Gaps = 2/242 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEP L NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+D+ W L DE+ F+
Sbjct: 76 EEPRLQENPQRFVLFPIKYREIWQMYKKAEASFWTAEEIDLSKDIHDWNNRLNDDERFFI 135
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 136 SHVLAFFAASDGIVNENLLERFSNEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEQ 195
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
++ LF AI+T+PC+ KKA WA+ WI D + TF++RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 196 KQRTYLFEAIDTIPCIRKKADWAIRWIQDKNSTFSQRLVAFAAVEGIFFSGSFASIFWLK 255
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELISRDEGLH DFACLL+S L + V+A++ EAV IE+EF+ DA
Sbjct: 256 KRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNYRPDPNAVEAIITEAVTIEQEFLTDA 315
Query: 244 LP 245
LP
Sbjct: 316 LP 317
>gi|28393533|gb|AAO42187.1| putative ribonucleoside-diphosphate reductase small chain
[Arabidopsis thaliana]
Length = 243
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/216 (75%), Positives = 184/216 (85%), Gaps = 3/216 (1%)
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSF 176
T I + ++ +F V KKA WA+ WI+GS++FAER++AFACVEGIFFSGSF
Sbjct: 28 FSTRISKTTKREIIFFVQSKPFLVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSF 87
Query: 177 CAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIE 236
C+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLRTK E+R+KA+V +AVEIE
Sbjct: 88 CSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKFDEDRLKAIVCDAVEIE 147
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
REFVCDAL CALVGMN ELMSQYIEFVADRLL ALG GK+YGV NPFDWMELISLQGKTN
Sbjct: 148 REFVCDALSCALVGMNRELMSQYIEFVADRLLAALGCGKVYGVTNPFDWMELISLQGKTN 207
Query: 297 FFEKRVGEYQKASVMSSLNGNGG---NHVFKIDEDF 329
FFEKRVGEYQKASVMSS++GN +HVFK+DEDF
Sbjct: 208 FFEKRVGEYQKASVMSSVHGNAAFNDDHVFKLDEDF 243
>gi|269963257|ref|ZP_06177590.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
gi|269832005|gb|EEZ86131.1| hypothetical protein VME_39740 [Vibrio harveyi 1DA3]
Length = 310
Score = 340 bits (871), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 213/294 (72%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAAS 74
++F +FPIQY +IW+ YK EA+FWT EE+D +QDL LT EKHF+ HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
+G++ ENL RF E+++AEAR F Q E IH+E Y+L LETYI D +E+ RLF+AI
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA W + WI +T A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKTLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + + +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
ELM QYIE AD + G G+ ++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFTPIFGAENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|308806626|ref|XP_003080624.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
gi|116059085|emb|CAL54792.1| putative ribonucleotide reductase small subunit (ISS) [Ostreococcus
tauri]
Length = 241
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 183/220 (83%), Gaps = 1/220 (0%)
Query: 110 SEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEG 169
+EMYSLL++ Y+KD EK+ LF AIET+PCV KKA WAL WID S++FAERL+AFAC+EG
Sbjct: 23 AEMYSLLIDQYVKDPAEKSHLFRAIETIPCVKKKADWALKWIDSSDSFAERLLAFACIEG 82
Query: 170 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALV 229
IFFSGSFC+I+WLKKRGLMPGLTFSNELISRDEGLH DFACLLY +L K EE V+ +V
Sbjct: 83 IFFSGSFCSIYWLKKRGLMPGLTFSNELISRDEGLHRDFACLLYQMLNNKPDEEVVRKIV 142
Query: 230 KEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELI 289
EAVEIE+EFVCD+LPCALVGMN +MS YIE+VAD L +LG K Y ANPFDWMELI
Sbjct: 143 TEAVEIEKEFVCDSLPCALVGMNAGMMSDYIEYVADHLFTSLGMPKEYNTANPFDWMELI 202
Query: 290 SLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
SLQGKTNFFEKRVGEYQKA VM+S+ G N F +DEDF
Sbjct: 203 SLQGKTNFFEKRVGEYQKAGVMNSIGGGNAN-AFSLDEDF 241
>gi|350532636|ref|ZP_08911577.1| Ribonucleoside-diphosphate reductase [Vibrio rotiferianus DAT722]
gi|424032641|ref|ZP_17772058.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-01]
gi|424037729|ref|ZP_17776454.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-02]
gi|408875699|gb|EKM14843.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-01]
gi|408895210|gb|EKM31674.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-02]
Length = 310
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 212/294 (72%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAAS 74
++F +FPIQY +IW+ YK EA+FWT EE+D +QDL LT EKHF+ HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
+G++ ENL RF E+++AEAR F Q E IH+E Y+L LETYI D +E+ RLF+AI
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA W + WI + A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + + +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
ELM QYIE AD + G G+ ++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFNPIFGAENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|424046200|ref|ZP_17783763.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-03]
gi|408885457|gb|EKM24174.1| ribonucleoside-diphosphate reductase subunit M2 [Vibrio cholerae
HENC-03]
Length = 310
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 212/294 (72%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAAS 74
++F +FPIQY +IW+ YK EA+FWT EE+D +QDL LT EKHF+ HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
+G++ ENL RF E+++AEAR F Q E IH+E Y+L LETYI D +E+ RLF+AI
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA W + WI + A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + + +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVAQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
ELM QYIE AD + G G+ ++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFNPIFGAENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|444425042|ref|ZP_21220490.1| ribonucleotide reductase small subunit [Vibrio campbellii CAIM 519
= NBRC 15631]
gi|444241652|gb|ELU53173.1| ribonucleotide reductase small subunit [Vibrio campbellii CAIM 519
= NBRC 15631]
Length = 310
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 212/294 (72%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAAS 74
++F +FPIQY +IW+ YK EA+FWT EE+D +QDL LT EKHF+ HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
+G++ ENL RF E+++AEAR F Q E IH+E Y+L LETYI D +E+ RLF+AI
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA W + WI + A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + + +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
ELM QYIE AD + G G+ ++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFTPIFGAENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|389613574|dbj|BAM20123.1| ribonucleoside diphosphate reductase small subunit [Papilio xuthus]
Length = 284
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 159/223 (71%), Positives = 183/223 (82%), Gaps = 2/223 (0%)
Query: 5 PE-EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
PE EPLL NP RF +FPIQYP IW+MYKKAEASFWT EEVDLS+DL WE+L E+HF
Sbjct: 54 PELEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWESLKDCERHF 113
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYSLL++TYI+D
Sbjct: 114 IKHVLAFFAASDGIVNENLVERFSQEVQIGEARFFYGFQIAMENVHSEMYSLLIDTYIRD 173
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
E++ LF+A+ET+PCV KKA WAL WI + F ER++AFA VEGIFFSGSF +IFWL
Sbjct: 174 PKERDFLFNAVETLPCVKKKADWALQWIASKTANFGERIVAFAAVEGIFFSGSFASIFWL 233
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERV 225
KKRGLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV
Sbjct: 234 KKRGLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSKERV 276
>gi|343495113|ref|ZP_08733308.1| Ribonucleoside-diphosphate reductase [Vibrio nigripulchritudo ATCC
27043]
gi|342823810|gb|EGU58402.1| Ribonucleoside-diphosphate reductase [Vibrio nigripulchritudo ATCC
27043]
Length = 310
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 212/294 (72%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAAS 74
++F +FPIQY +IW+ YK EA+FWT EE+D +QDL + LT E+HF+ HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLPDLQKLTEGEQHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
+G++ ENL RF E+++AEAR F Q E IH+E Y+L LETYI D +E+ RLF+AI
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
+ VP V +KA W + WI + RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 DNVPTVKRKAQWVMKWISSDKPLPMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K+++ + + +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQAEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
+LM QYIE AD + G G+ K++G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 DLMCQYIEHTADVIAGLFGFDKVFGSENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|163801385|ref|ZP_02195284.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
AND4]
gi|159174874|gb|EDP59674.1| ribonucleoside-diphosphate reductase 1, beta subunit [Vibrio sp.
AND4]
Length = 310
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 210/294 (71%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAAS 74
++F +FPIQY +IW+ YK EA+FWT EE+D +QDL LT EKHF+ HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLPDLVKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
+G++ ENL RF E+++AEAR F Q E IH+E Y+L LETYI D +E+ RLF+AI
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPDVEERERLFNAI 124
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA W + WI + A RLIAF VEG+FF+GSFCAI++ +KRGL+ GL S
Sbjct: 125 ENVPTVQRKAQWVMKWISSDKPLAMRLIAFGLVEGLFFAGSFCAIYYFRKRGLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + + +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
ELM QYIE AD + G+ +G NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIADLFGFNPAFGSENPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|307104534|gb|EFN52787.1| hypothetical protein CHLNCDRAFT_10712, partial [Chlorella
variabilis]
Length = 214
Score = 330 bits (845), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 149/214 (69%), Positives = 181/214 (84%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L N +RFC+ P++Y + +E YK+A+AS+WTAEEVDLSQD+R W LT DE+HFV+
Sbjct: 1 KEPILQANNERFCLLPVKYDRCFEYYKQAQASYWTAEEVDLSQDMRDWRKLTDDERHFVS 60
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIVLENL+ RFM EVQ+ EARAFY FQ AIE +HSEMY LLLE YI+D D
Sbjct: 61 YVLAFFAASDGIVLENLSTRFMQEVQIPEARAFYAFQSAIEAVHSEMYGLLLEQYIRDPD 120
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
E++ LFHA++T+PCV KKA WA+ WI+ S FAERL+A+ACVEGI FSGSFC+IFWLKKR
Sbjct: 121 ERDLLFHAVDTIPCVQKKAQWAMKWIESSSCFAERLVAYACVEGIHFSGSFCSIFWLKKR 180
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK 219
LMPGLTFSNE+ISRDEGLH DFAC LY LL+ +
Sbjct: 181 QLMPGLTFSNEMISRDEGLHTDFACHLYELLQNR 214
>gi|375073645|gb|AFA34381.1| ribonucleotide diphosphate reductase, partial [Ostrea edulis]
Length = 233
Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 159/233 (68%), Positives = 187/233 (80%), Gaps = 6/233 (2%)
Query: 103 IAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLI 162
IA+ENIHSEMYSLL++TYI D EK+RL IET+P V KKA WA+ W++ S+ +AERL+
Sbjct: 1 IAMENIHSEMYSLLIDTYISDEVEKSRLLRGIETIPSVGKKANWAIKWMESSDVYAERLV 60
Query: 163 AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE 222
AF+ VEGIFFSGSFC+IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY L TKLS+
Sbjct: 61 AFSAVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYKHLETKLSQ 120
Query: 223 ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANP 282
E++ ++ AVEIE+EFV ++LP L+GMN +LM+QYIEFVADRLL LG +LY NP
Sbjct: 121 EKIYEIIGGAVEIEKEFVTESLPVDLIGMNSKLMAQYIEFVADRLLLELGCDRLYNAKNP 180
Query: 283 FDWMELISLQGKTNFFEKRVGEYQKASVMSSL-NGNGGN-----HVFKIDEDF 329
F WMELISL GKTNFFEKRVGEYQKA+VM S+ NGN N F +D DF
Sbjct: 181 FSWMELISLDGKTNFFEKRVGEYQKANVMKSVGNGNSTNSKNYEKKFNLDADF 233
>gi|403270691|ref|XP_003927300.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 175/322 (54%), Positives = 211/322 (65%), Gaps = 48/322 (14%)
Query: 8 PLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHV 67
PLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D+RHWE+L +E++FV+HV
Sbjct: 71 PLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIRHWESLKPEERYFVSHV 130
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
LAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYIKD +E
Sbjct: 131 LAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDPNES 190
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGL 187
E P V+ F S S + L K
Sbjct: 191 -------EEKPVVSHLP--------------------------FESSSALNMSMLDK--- 214
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
E +D+GLHCDFACL++ L K SEERV+ ++ AV IE+EF+ +ALP
Sbjct: 215 --------ENAEKDKGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVK 266
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEKRVGEYQ+
Sbjct: 267 LIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQR 326
Query: 308 ASVMSSLNGNGGNHVFKIDEDF 329
VMSS N F +D DF
Sbjct: 327 MGVMSSPTENS----FTLDADF 344
>gi|62866936|gb|AAY17359.1| ribonucleotide reductase small subunit [Haemonchus contortus]
Length = 374
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 179/332 (53%), Positives = 227/332 (68%), Gaps = 14/332 (4%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP+RF +FP++Y IW YKKA ASFWT EEVDL++D+ WE +T +E+ F++
Sbjct: 49 EEPLLRENPNRFVIFPLKYHDIWAFYKKAVASFWTVEEVDLAKDMADWEKMTDNERFFIS 108
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL RF EVQV EAR FYG QIAIENIHSEMYS L+ETYI+D
Sbjct: 109 RVLAFFAASDGIVNENLVERFSKEVQVPEARFFYGSQIAIENIHSEMYSKLIETYIRDEK 168
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET----FAERLIAFACVEGIFFSGSFCAIFW 181
E+N LF+AI VPC+AKKA WA+ G +T FAER+IAFA V G FS AI +
Sbjct: 169 ERNILFNAIFEVPCIAKKAEWAVKM--GLQTITAPFAERVIAFAAVGGNIFSLGPVAIPF 226
Query: 182 --LKKRGLMPGLTFS--NELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIER 237
LKK+G G + S LI DEG+H ++ KLS+ER+ ++++AV IE+
Sbjct: 227 SGLKKKGDWRGWSHSILRSLIQGDEGVHAISHVCCIQHIKNKLSQERIYYIIRDAVAIEQ 286
Query: 238 EFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNF 297
EF+ ++LP ++GMN LM QYIE+VAD LL LG K+ NPFD+ME IS+ GKTNF
Sbjct: 287 EFLSESLPVDMIGMNCRLMCQYIEYVADHLLVELGCEKICKSKNPFDFMENISIDGKTNF 346
Query: 298 FEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
FEK+V EYQ+ V+S+ F++D DF
Sbjct: 347 FEKKVSEYQRPGVLST----EKERQFQLDADF 374
>gi|269105083|ref|ZP_06157778.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268160718|gb|EEZ39216.1| ribonucleotide reductase 2 [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 310
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 154/294 (52%), Positives = 208/294 (70%), Gaps = 1/294 (0%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAAS 74
++F +FPIQY +IW+ YK EA+FWT EE+D +QDL LT EKHF+ HVLAFFA S
Sbjct: 5 NKFSLFPIQYEEIWQAYKTHEAAFWTTEELDFAQDLADLAKLTEGEKHFIRHVLAFFAQS 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
+G++ ENL RF E+++AEAR F Q E IH+E Y+L LETYI +E+ RLF+AI
Sbjct: 65 EGMINENLLTRFYGEIEIAEARCFLALQAFNEVIHAETYALQLETYIPAVEERERLFNAI 124
Query: 135 ETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
E VP V +KA W + WI + RLIAF VEG+FF+GSFCAI++ +KR L+ GL S
Sbjct: 125 ENVPTVKRKAEWVMKWISSDKPLTMRLIAFGLVEGLFFAGSFCAIYYFRKRSLLAGLAAS 184
Query: 195 NELISRDEGLHCDFACLLYSLL-RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNG 253
N+LI+RDEGLH F+ LL+ L + K++++ + + +EAV IE+EFV +ALP L+GMN
Sbjct: 185 NDLIARDEGLHFSFSALLFKTLGQGKVTQQEFEEICREAVSIEKEFVTEALPVDLIGMNA 244
Query: 254 ELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
ELM QYIE AD + G G+ ++ NPFD+M L+ ++GKTNFFEKRV EY++
Sbjct: 245 ELMCQYIEHTADVIAGLFGFDPIFYAKNPFDYMRLLDMEGKTNFFEKRVTEYKR 298
>gi|56555145|gb|AAV98100.1| RR2 protein [White spot syndrome virus]
Length = 328
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 203/294 (69%), Gaps = 1/294 (0%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
L NP+RF PI + +WEMYKK A FWT EE+D +D + WE LT DEK F+ +L
Sbjct: 35 LTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDEKDFILQIL 94
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA+SDGIV+ENL R Q+ EAR+F+ FQ+ +E+IH +Y L++ + D +K
Sbjct: 95 AFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRLVPDEKDKA 154
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LF+A + P + KK WA+NW+ + AE ++AFA VEGIFFSG+F +IFW+K RG++
Sbjct: 155 ILFNAAQHFPAIKKKEQWAINWMQSNNDLAELIVAFAAVEGIFFSGAFASIFWIKNRGIL 214
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
PGLT SNE ISRDEGLH DFAC+L S ER+ +V EAV IE+EF+ +LP
Sbjct: 215 PGLTSSNEFISRDEGLHRDFACMLLKKGFVDTPSRERILEIVTEAVRIEQEFLTVSLPVK 274
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
LVGMN +LMSQYIEFVAD+LL +G K Y V NPF +M+ ISL+ KTNFFEKR
Sbjct: 275 LVGMNCKLMSQYIEFVADKLLVEMGLEKHYNVTNPFPFMDNISLENKTNFFEKR 328
>gi|20069937|ref|NP_613141.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
gi|20043331|gb|AAM09166.1| ribonucleotide reductase small subunit [Mamestra configurata NPV-A]
gi|33331769|gb|AAQ11077.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-A]
Length = 313
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 210/294 (71%), Gaps = 3/294 (1%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
R ++PI + ++E YK+AEA FW EEVDLS+D ++ L D++HF+ HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV N+ + V EA FY FQ A+EN+H++MY L+ I D ++ + +A
Sbjct: 65 DSIVNINVLNYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIIELIPDKKHQDLILNAF 124
Query: 135 ETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
+ VPCV KK WAL WI+ + TFAERL+AFA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNVPCVRKKDDWALKWIENDKATFAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEG+H DFACL Y+ ++ KLS E++ + KEAV+IE+EF DALP +L+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVKEKLSYEKILDMFKEAVDIEKEFFTDALPVSLLGMN 244
Query: 253 GELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
+M +YIEFVADRLL LG K Y NPF +M ISL+GKTNFFE+RVGEY+
Sbjct: 245 ATMMCEYIEFVADRLLMQLGQPKYYNARNPFSFMNNISLEGKTNFFERRVGEYK 298
>gi|215401283|ref|YP_002332587.1| ribonucleotide reductase small subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|198448783|gb|ACH88573.1| ribonucleotide reductase small subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|390165255|gb|AFL64902.1| rr2b [Mamestra brassicae MNPV]
gi|401665659|gb|AFP95771.1| ribonucleotide reductase small subunit [Mamestra brassicae MNPV]
Length = 313
Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 208/294 (70%), Gaps = 3/294 (1%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
R ++PI + ++E YK+AEA FW EEVDLS+D ++ L D++HF+ HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV N+ + V EA FY FQ A+EN+H++MY L+ T I D +++ + +A
Sbjct: 65 DSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILNAF 124
Query: 135 ETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
+ +PCV KK WAL W + T AERL+AFA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNIPCVRKKDDWALKWTKNKKLTLAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEG+H DFACL Y+ + KLS E + + KEAV+IE+EF DALP AL+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244
Query: 253 GELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
++M +YIEFVADRLL LG K Y NPF +M ISL+GKTNFFE+RVGEY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYNARNPFPFMNNISLEGKTNFFERRVGEYK 298
>gi|448825572|ref|YP_007418503.1| ribonucleoside-diphosphate reductase small chain [Megavirus lba]
gi|444236757|gb|AGD92527.1| ribonucleoside-diphosphate reductase small chain [Megavirus lba]
Length = 406
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 148/306 (48%), Positives = 209/306 (68%), Gaps = 2/306 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L+ +R+ ++PI Y Q+W+ YK + W EEVDLS+D++HW L+ +++ F+ H
Sbjct: 89 EPVLSSTNERYTVYPIIYNQVWKNYKDQLKNNWVVEEVDLSKDVQHWNKLSENDRIFIMH 148
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFA++DGIV N+ + V++ EA YG Q +EN H EMYSL+L+T++KD
Sbjct: 149 VLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVKDDIL 208
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR- 185
K L AI+T+P + KKA W WI +T+A +L AFA VEG+FFSGSF +IFWLK R
Sbjct: 209 KKNLIEAIKTMPSIKKKADWCQKWIKSDKTYAHKLAAFAVVEGVFFSGSFASIFWLKTRK 268
Query: 186 -GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
+MPGL SN+ I+RDE H + AC++YSLL+ KL E + +++EA++IE EF+ +L
Sbjct: 269 GSVMPGLIKSNKFIARDENKHVELACIMYSLLKNKLKESVIHEIIQEAIDIEDEFINCSL 328
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC L+GMN LMSQYI++VADRLL LGY K Y NPF++M+ I + K NFFE+R
Sbjct: 329 PCRLLGMNSSLMSQYIKYVADRLLVGLGYKKKYFAENPFEYMKKIDVFTKANFFEERNDA 388
Query: 305 YQKASV 310
Y + +
Sbjct: 389 YADSKI 394
>gi|363540639|ref|YP_004894645.1| mg594 gene product [Megavirus chiliensis]
gi|350611804|gb|AEQ33248.1| ribonucleoside-diphosphate reductase small chain [Megavirus
chiliensis]
gi|371943945|gb|AEX61773.1| ribonucleoside-diphosphate reductase small chain [Megavirus
courdo7]
gi|425701506|gb|AFX92668.1| ribonucleoside-diphosphate reductase small chain [Megavirus
courdo11]
Length = 406
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 148/306 (48%), Positives = 209/306 (68%), Gaps = 2/306 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L+ +R+ ++PI Y Q+W+ YK + W EEVDLS+D++HW L+ +++ F+ H
Sbjct: 89 EPVLSSTNERYTVYPIIYNQVWKNYKDQLKNNWVVEEVDLSKDVQHWNKLSENDRIFIMH 148
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFA++DGIV N+ + V++ EA YG Q +EN H EMYSL+L+T++KD
Sbjct: 149 VLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVKDDIL 208
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR- 185
K L AI+T+P + KKA W WI +T+A +L AFA VEG+FFSGSF +IFWLK R
Sbjct: 209 KKNLIEAIKTMPSIKKKADWCQKWIKSDKTYAHKLAAFAVVEGVFFSGSFASIFWLKTRK 268
Query: 186 -GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
+MPGL SN+ I+RDE H + AC++YSLL+ KL E + +++EA++IE EF+ +L
Sbjct: 269 GSVMPGLIKSNKFIARDENKHVELACIMYSLLKNKLKESVIHEIIQEAIDIEDEFINCSL 328
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
PC L+GMN LMSQYI++VADRLL LGY K Y NPF++M+ I + K NFFE+R
Sbjct: 329 PCRLLGMNSSLMSQYIKYVADRLLVGLGYKKKYFAENPFEYMKKIDVFTKANFFEERNDA 388
Query: 305 YQKASV 310
Y + +
Sbjct: 389 YADSKI 394
>gi|406707526|ref|YP_006757878.1| ribonucleotide reductase small subunit [alpha proteobacterium
HIMB59]
gi|406653302|gb|AFS48701.1| Ribonucleotide reductase, small chain [alpha proteobacterium
HIMB59]
Length = 329
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 207/312 (66%), Gaps = 20/312 (6%)
Query: 18 CMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGI 77
+FPIQ+ +IW+ YK+ +FWT EEV L DLR + L EKHF+ HVLAFFA S+ +
Sbjct: 8 SIFPIQHQEIWDRYKQHVQAFWTPEEVSLQDDLRDLKTLNEGEKHFIKHVLAFFANSEAM 67
Query: 78 VLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV 137
+ ENLA RF E+ + E+R F Q+ E+IH+EMY L +E Y++D EK++LF AI+ V
Sbjct: 68 INENLASRFYNEILIPESRLFITMQMLNESIHAEMYGLQIEAYVEDPAEKDKLFSAIQNV 127
Query: 138 PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNEL 197
PC+ KKA W W++G + RLIAF VEG+FF+GSFCAI++ +KRGL+PGL SN+
Sbjct: 128 PCINKKAQWVSKWLNGKQNLLTRLIAFGLVEGLFFAGSFCAIYYFRKRGLLPGLALSNDW 187
Query: 198 ISRDEGLHCDFACLLYSLLRTK-----LSEERVKAL---------------VKEAVEIER 237
I+RDEG+H F+ L++ L K LS+E +K++ V+EAVE E+
Sbjct: 188 IARDEGMHFSFSALMFKTLSNKFNNGTLSDEDIKSMDLIPNLVSQSEFEEIVREAVEFEK 247
Query: 238 EFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNF 297
EFV DALP L+GMN E+M YIE V+DR+ G+ +YG NPFD+M + +Q TNF
Sbjct: 248 EFVTDALPVDLIGMNKEMMCMYIEAVSDRIADLFGFEHVYGTENPFDFMRALDVQNVTNF 307
Query: 298 FEKRVGEYQKAS 309
FEKRV EYQ+ +
Sbjct: 308 FEKRVSEYQRPT 319
>gi|209170936|ref|YP_002268082.1| agip52 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436527|gb|ACI28754.1| ribonucleotide reductase-2B [Agrotis ipsilon multiple
nucleopolyhedrovirus]
Length = 313
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 162/295 (54%), Positives = 207/295 (70%), Gaps = 3/295 (1%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAAS 74
R + PI + +W YK+A W EEVD+S+D +E+ L DE++F+ HVLAFFAA+
Sbjct: 5 RKVLKPILHDDLWAAYKQAFDCMWKVEEVDMSRDYDDFESKLNDDERYFIKHVLAFFAAA 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV NL V EA+ FY Q+ IE +H+EMY+LL+E IKD E++ L +A
Sbjct: 65 DSIVNINLIEYMQRNVPELEAQYFYNLQVLIECVHTEMYNLLIEQLIKDEHERDTLLNAF 124
Query: 135 ETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
E VPCV KKA WA+ WI+ + T AER++AFA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 EHVPCVRKKAQWAMKWIESDTATLAERMVAFAIVEGVFFSGSFAAIFYIKTKGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSLLRT-KLSEERVKALVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEGLH DFACL Y T KL + + ++ KEAV IE+EF ALP L+GMN
Sbjct: 185 SNELISRDEGLHTDFACLYYKTRVTEKLDSDTILSMFKEAVAIEKEFFTAALPVELLGMN 244
Query: 253 GELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
+ M +YIEFVADRLL LG K + NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 245 AQSMCEYIEFVADRLLVQLGQPKYFNARNPFEFMNNISLEGKTNFFEKRVGEYKR 299
>gi|22549454|ref|NP_689227.1| rr2b gene product [Mamestra configurata NPV-B]
gi|22476633|gb|AAM95039.1| putative ribonucleotide reductase small subunit-like protein
[Mamestra configurata NPV-B]
Length = 313
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 207/294 (70%), Gaps = 3/294 (1%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
R ++PI + ++E YK+AEA FW EEVDLS+D ++ L D++HF+ HVL FF+A+
Sbjct: 5 RKTLYPIVHEDLYEAYKRAEACFWRMEEVDLSKDYDDFQLKLNNDQRHFIMHVLGFFSAA 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV N+ + V EA FY FQ A+EN+H++MY L+ T I D +++ + +A
Sbjct: 65 DSIVNINVLDYMLQTVPELEAVYFYTFQAAMENVHTQMYGTLIITLIPDKKQQDLILNAF 124
Query: 135 ETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
+ + CV KK WAL W + T AERL+AFA VEG+FFSGSF AIF++K G+MPGLTF
Sbjct: 125 DNISCVRKKDDWALKWTKNKKLTLAERLVAFAIVEGVFFSGSFAAIFYIKTLGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEG+H DFACL Y+ + KLS E + + KEAV+IE+EF DALP AL+GMN
Sbjct: 185 SNELISRDEGMHTDFACLYYNTRVNEKLSYETILDMFKEAVDIEKEFFTDALPVALLGMN 244
Query: 253 GELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
++M +YIEFVADRLL LG K Y NPF +M ISL+GKTNFFE+RVGEY+
Sbjct: 245 ADMMCEYIEFVADRLLLQLGQPKYYNARNPFPFMNNISLEGKTNFFERRVGEYK 298
>gi|90592764|ref|YP_529717.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
gi|71559214|gb|AAZ38213.1| RR2B [Agrotis segetum nucleopolyhedrovirus]
Length = 313
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/317 (52%), Positives = 214/317 (67%), Gaps = 11/317 (3%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAAS 74
R +FPIQ+ +W YK+A W EEVDLS+D + + L DE++F+ HVLAFFAA+
Sbjct: 5 RKVLFPIQHNDLWRAYKQALDCMWKVEEVDLSKDCDDFTSKLNDDERYFIKHVLAFFAAA 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV NL V EA+ FY Q+ IE +H+EMY+LL+ I D E++ L +A
Sbjct: 65 DSIVNINLIEYMQQNVPELEAQYFYNQQVLIECVHTEMYNLLIHQLISDEHERDTLLNAF 124
Query: 135 ETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
E +PCV KK WA+ WI+ S TFAER++AFA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ERMPCVRKKTDWAMKWINSSTATFAERMVAFAIVEGVFFSGSFAAIFYIKTKGIMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEGLH DFACL Y+ + KL+ + V ++ KEAV IE+EF ALP AL+GMN
Sbjct: 185 SNELISRDEGLHTDFACLYYNTRVHDKLAPDTVLSMFKEAVAIEKEFFTAALPAALLGMN 244
Query: 253 GELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMS 312
+ M YIEFVADRLL L K + NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 245 AQSMCDYIEFVADRLLVQLHQPKHFHARNPFEFMNNISLEGKTNFFEKRVGEYKRFG--- 301
Query: 313 SLNGNGGNHVFKIDEDF 329
G+ F I +DF
Sbjct: 302 -----AGDDKFVILDDF 313
>gi|451927338|gb|AGF85216.1| reductase small subunit [Moumouvirus goulette]
Length = 398
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 210/310 (67%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTAD-EKH 62
I EP+L+ +R+ ++PI Y +W+ YK W EEVDLS+D+ W L +D ++
Sbjct: 76 IITEPILSTASERYTVYPIVYNNVWKNYKDQLKINWVVEEVDLSKDVSDWNNLLSDNDRL 135
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ HVLAFFA++DGIV N+ + V++ EA YG Q +EN H EMYSL+L+T++K
Sbjct: 136 FIMHVLAFFASADGIVNANIKENLIDIVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVK 195
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D K++L AI+T+P + KKA W WI +T+A +L+AFA VEG+FFSGSF +IFWL
Sbjct: 196 DDILKDKLIKAIKTMPSIKKKAEWCKKWIKSDKTYAHKLVAFATVEGVFFSGSFASIFWL 255
Query: 183 KKR--GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
K R +MPGL SN+ I+RDE H + A +L+SLL+ KL E V ++ EA++IE EF+
Sbjct: 256 KTRQGNVMPGLIKSNKFIARDENKHVELASILFSLLKNKLKESVVYEIIDEAIQIEDEFI 315
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN ELMSQYI++VADRLL LGY K Y V NPF++M+ I + K NFFE+
Sbjct: 316 NDSLPCRLLGMNSELMSQYIKYVADRLLVQLGYKKKYFVENPFEYMKKIDVFVKANFFEE 375
Query: 301 RVGEYQKASV 310
R Y A +
Sbjct: 376 RNDAYSDAKI 385
>gi|441432445|ref|YP_007354487.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
moumouvirus]
gi|440383525|gb|AGC02051.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
moumouvirus]
Length = 401
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 210/310 (67%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEAL-TADEKH 62
I EP+L+ +R+ ++PIQY +W+ YK W EEVDLS+D+ W L + +++
Sbjct: 79 IVPEPILSTASERYTVYPIQYNNVWKNYKDQLKINWVVEEVDLSKDVSDWNNLLSENDRI 138
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ HVLAFFA++DGIV N+ + V++ EA YG Q +EN H EMYSL+L+T++K
Sbjct: 139 FIMHVLAFFASADGIVNANIKENLIDVVKIKEAECAYGKQFEMENAHGEMYSLMLDTFVK 198
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D K++L AI+T+P + KKA W WI +T+A +L+AFA VEG+FFSGSF +IFWL
Sbjct: 199 DDILKDKLIKAIKTMPSIKKKADWCKKWIKSDKTYAHKLVAFAIVEGVFFSGSFASIFWL 258
Query: 183 KKR--GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
K R +MPGL SN+ I+RDE H + A +L+SLL+ +L E V ++ EA++IE EF+
Sbjct: 259 KTRQGNVMPGLIKSNKFIARDENKHVELASILFSLLKNRLKESVVHEIIDEAIQIEDEFI 318
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN +LMSQYI++VADRLL LGY K Y NPF++M+ I + K NFFE+
Sbjct: 319 NDSLPCRLLGMNSQLMSQYIKYVADRLLVQLGYKKKYFADNPFEYMKKIDVFVKANFFEE 378
Query: 301 RVGEYQKASV 310
R Y A +
Sbjct: 379 RNDAYSDAKI 388
>gi|388522397|gb|AFK49260.1| unknown [Lotus japonicus]
Length = 218
Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 144/187 (77%), Positives = 166/187 (88%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L RFCMFPI+Y Q+WEMYKKA ASFWTAEEVDL+ D++HW L+ EKHF+T
Sbjct: 28 QEPILMEQTQRFCMFPIRYKQVWEMYKKAPASFWTAEEVDLTYDVQHWATLSNSEKHFIT 87
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RF+ +VQ+ EARAFYGFQIA+ENIHSEMYSLLLET IKDS
Sbjct: 88 HVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSR 147
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIE +PCVA+KA WALNWI+ S +FAERL+AFAC+EGIFFSGSFC+IFWLKKR
Sbjct: 148 EKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEGIFFSGSFCSIFWLKKR 207
Query: 186 GLMPGLT 192
GLMPGLT
Sbjct: 208 GLMPGLT 214
>gi|351737466|gb|AEQ60501.1| ribonucleotide reductase small subunit [Acanthamoeba castellanii
mamavirus]
gi|398257152|gb|EJN40760.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
lentillevirus]
Length = 417
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKH 62
I +EP+L+ +++ + PI+Y ++W+ YK ++WT EEVDL++D+ W L+ D+++
Sbjct: 96 IMKEPILSLTSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRN 155
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ HVLAFFAA+DGIV N+ + V++ EA YGFQ A+EN H EMYSL+L T++K
Sbjct: 156 FIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVK 215
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D +N+L ++I+T+P + KKA W WI +T+A +L+AF+ VEG+FFSGSF +IFWL
Sbjct: 216 DDALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWL 275
Query: 183 KKRGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
K R + MPGL SN+ I+RDE H + AC++YSLL +L E V ++ EA+EIE EF+
Sbjct: 276 KTREMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFI 335
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN ELMSQYI++VADRLL LGY K + V NPF++M+ I + K NFFEK
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEK 395
Query: 301 RVGEYQKASV 310
R Y A++
Sbjct: 396 RNDAYSNANI 405
>gi|294945135|ref|XP_002784568.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239897674|gb|EER16364.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 238
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 154/238 (64%), Positives = 187/238 (78%), Gaps = 13/238 (5%)
Query: 105 IENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAF 164
+ENIHSE YSLL++ YIKD EK+++F AIETVP V KKA WAL+WI+ F+ERLIAF
Sbjct: 1 MENIHSETYSLLIDNYIKDPAEKDKIFRAIETVPSVRKKAEWALSWINDDNCFSERLIAF 60
Query: 165 ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-TKLSEE 223
ACVEGI FSGSFCAI+WLKKRGLMPGLTFSNELISRDEGLH DFACLLY+++ T+L +E
Sbjct: 61 ACVEGILFSGSFCAIYWLKKRGLMPGLTFSNELISRDEGLHADFACLLYNMMHYTRLPDE 120
Query: 224 RVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPF 283
RV +V+ AV++ER F+ ++LP +L+GMN +LM +YIEFVADRLL ALG+ KLY NPF
Sbjct: 121 RVHEIVRGAVDVERVFISESLPVSLIGMNSQLMCRYIEFVADRLLVALGHPKLYNATNPF 180
Query: 284 DWMELISLQGKTNFFEKRVGEYQKASVM--SSLNGNGGNHV----------FKIDEDF 329
DWM++ISLQGKTNFFEKRVGEYQK VM ++ + NG F +DEDF
Sbjct: 181 DWMKMISLQGKTNFFEKRVGEYQKGGVMAGTAAHKNGSMDAEERRKSIGADFALDEDF 238
>gi|311977695|ref|YP_003986815.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
polyphaga mimivirus]
gi|77416594|sp|Q7T6Y9.2|RIR2_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|55664859|gb|AAQ09571.2| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
mimivirus]
gi|308204332|gb|ADO18133.1| ribonucleoside-diphosphate reductase small chain [Acanthamoeba
polyphaga mimivirus]
gi|339061248|gb|AEJ34552.1| ribonucleotide reductase small subunit [Acanthamoeba polyphaga
mimivirus]
Length = 417
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKH 62
I +EP+L+ +++ + PI+Y ++W+ YK ++WT EEVDL++D+ W L+ D+++
Sbjct: 96 IMKEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRN 155
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ HVLAFFAA+DGIV N+ + V++ EA YGFQ A+EN H EMYSL+L T++K
Sbjct: 156 FIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVK 215
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D +N+L ++I+T+P + KKA W WI +T+A +L+AF+ VEG+FFSGSF +IFWL
Sbjct: 216 DDALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWL 275
Query: 183 KKRGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
K R + MPGL SN+ I+RDE H + AC++YSLL +L E V ++ EA+EIE EF+
Sbjct: 276 KTREMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFI 335
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN ELMSQYI++VADRLL LGY K + V NPF++M+ I + K NFFEK
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEK 395
Query: 301 RVGEYQKASV 310
R Y A++
Sbjct: 396 RNDAYSNANI 405
>gi|74229799|ref|YP_309003.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
gi|72259713|gb|AAZ67484.1| ribonucleotide reductase small subunit (rr2) [Trichoplusia ni SNPV]
Length = 318
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/321 (51%), Positives = 215/321 (66%), Gaps = 15/321 (4%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
R +FPI +W+ YKKA W EE+D+S+D W L E+ F+ HVLAFFAA+
Sbjct: 6 RKTLFPIVNEDLWQSYKKALDCHWKVEEIDMSKDFDDWNNKLNDKERFFLKHVLAFFAAA 65
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV N+ + V EA FY Q +IE +H+EMY++L+ YIKD E +R+ +AI
Sbjct: 66 DVIVNTNIIEHMQSAVPEMEASFFYAQQTSIECVHTEMYNILVVEYIKDPQECDRILNAI 125
Query: 135 ETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLK--KRGLMPGL 191
E + V +KATWA WI+ + TFAER++AFA VEG+FFSGSF AI+++K K+G +PGL
Sbjct: 126 EHIDSVKRKATWAQKWIESQTATFAERMVAFAIVEGVFFSGSFAAIYYIKDTKKGALPGL 185
Query: 192 TFSNELISRDEGLHCDFACLLYSLL---RTKLSEERVKALVKEAVEIEREFVCDALPCAL 248
T+SNELISRDEGLH DFACL Y+ KLSE +V + KEAV+IE++F +ALP A+
Sbjct: 186 TYSNELISRDEGLHTDFACLYYNKYIAKEDKLSESKVLNMFKEAVDIEKDFFTNALPVAM 245
Query: 249 VGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
+GMN M +YIEFVADRLL LGY K + NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 246 LGMNAHSMCEYIEFVADRLLIELGYEKYFKTLNPFEFMNNISLEGKTNFFEKRVGEYKRF 305
Query: 309 SVMSSLNGNGGNHVFKIDEDF 329
N ++I EDF
Sbjct: 306 G--------AANETYEILEDF 318
>gi|13242599|ref|NP_077613.1| EsV-1-128 [Ectocarpus siliculosus virus 1]
gi|13177402|gb|AAK14546.1|AF204951_128 EsV-1-128 [Ectocarpus siliculosus virus 1]
Length = 419
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 148/302 (49%), Positives = 208/302 (68%), Gaps = 5/302 (1%)
Query: 15 DRFCMF----PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAF 70
DRF +F +Y ++++YKK A FW EE+DLS D + WE ++DEKHF+ VLAF
Sbjct: 104 DRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAF 163
Query: 71 FAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRL 130
FA+ D IV+EN+ F E+ + + R + Q A E +H E YSLL++TY +D++E+ +
Sbjct: 164 FASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHV 223
Query: 131 FHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMP 189
+I+T+P + KKA WA W++ + + AERL+ F C+EG+ FSGSFCAI+WLKKR
Sbjct: 224 MRSIQTMPIIEKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFK 283
Query: 190 GLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALV 249
GL+F+N LI+RDEGLH + L+Y L+ +L ERV + K AV +E EF+ ALP AL+
Sbjct: 284 GLSFANSLIARDEGLHATASVLIYKHLKNRLPRERVHEIFKHAVSVECEFISSALPVALI 343
Query: 250 GMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKAS 309
G++ + M++YI+FVAD L LGY K+Y ANPF+WM++ISLQGKTNFFE RV EY K
Sbjct: 344 GISEKSMTEYIKFVADYWLNQLGYDKVYNCANPFEWMDMISLQGKTNFFENRVAEYSKPG 403
Query: 310 VM 311
V+
Sbjct: 404 VL 405
>gi|215401441|ref|YP_002332744.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
gi|209483982|gb|ACI47415.1| RR2b [Spodoptera litura nucleopolyhedrovirus II]
Length = 313
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 159/295 (53%), Positives = 207/295 (70%), Gaps = 3/295 (1%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAAS 74
R +FPIQ+ +W YK+A W EEVDLS+D + + LT +E++F+ +LAFFAA+
Sbjct: 5 RKVLFPIQHIDLWTAYKQALDCMWKVEEVDLSKDYDDFTQKLTDNERNFIEKILAFFAAA 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV N+ V EA+ FY Q+ IE IH+EMY+LL+ IKD +++ L +
Sbjct: 65 DSIVNINIIEHMQRTVPELEAQYFYNQQVLIECIHTEMYNLLIHALIKDEEKQATLLNGF 124
Query: 135 ETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
E++PCV +KA WA+ +I+ T AERLIAFA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ESMPCVRRKAEWAMKYIENENVTLAERLIAFAIVEGVFFSGSFAAIFYMKTKGVMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEGLH +FACL Y+ + KL V + EAV IE EF +ALP +LVGMN
Sbjct: 185 SNELISRDEGLHTNFACLYYNTRVDQKLDVPTVSDMFAEAVAIEMEFFAEALPESLVGMN 244
Query: 253 GELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
E+M +YIEFVADRLL L Y K+Y NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 245 AEMMRKYIEFVADRLLVQLKYPKIYHTENPFEFMNNISLEGKTNFFEKRVGEYKR 299
>gi|299472857|emb|CBN80426.1| EsV-1-128 [Ectocarpus siliculosus]
Length = 419
Score = 313 bits (802), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 209/302 (69%), Gaps = 5/302 (1%)
Query: 15 DRFCMF----PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAF 70
DRF +F +Y ++++YKK A FW EE+D+S D + W+ ++DEKHF+ VLAF
Sbjct: 104 DRFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDMSGDSKDWDDASSDEKHFLKLVLAF 163
Query: 71 FAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRL 130
FA+ D IV+EN+ F E+ + + R + Q A E +H E YSLL++TY +D++E+ +
Sbjct: 164 FASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHV 223
Query: 131 FHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMP 189
+I+T+P + KKA WA W++ + + AERL+ F C+EG+ FSGSFCAI+WLKKR
Sbjct: 224 MRSIQTMPIIEKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFK 283
Query: 190 GLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALV 249
GL+F+N LI+RDEGLH + L+Y LR KL +ERV + + AV +E EF+ ALP AL+
Sbjct: 284 GLSFANSLIARDEGLHATASVLIYKHLRNKLPQERVHEIFEHAVSVECEFISSALPVALI 343
Query: 250 GMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKAS 309
G++ + M++YI+FVAD L LGY K+Y ANPF+WM++ISLQGKTNFFE RV EY K
Sbjct: 344 GISEKSMTEYIKFVADYWLNQLGYDKVYNCANPFEWMDMISLQGKTNFFENRVAEYSKPG 403
Query: 310 VM 311
V+
Sbjct: 404 VL 405
>gi|9634266|ref|NP_037805.1| ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
exigua MNPV]
gi|6960505|gb|AAF33575.1|AF169823_45 ORF45 ribonucleotide reductase small subunit (rr2) [Spodoptera
exigua MNPV]
Length = 313
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/317 (51%), Positives = 212/317 (66%), Gaps = 11/317 (3%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAAS 74
R +FPIQ+ +W YK+A W EEVDLS+D + + LT +E++F+ +LAFFAA+
Sbjct: 5 RKVLFPIQHIDLWASYKQALDCMWKVEEVDLSKDYDDFTQKLTDNERNFIEKILAFFAAA 64
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV N+ V EA+ FY Q+ I+ IH+EMY+LL+ IKD ++ L +
Sbjct: 65 DSIVNINIIEHMQRTVPELEAQYFYNQQVLIQCIHTEMYNLLIHALIKDEKKQEMLLNGF 124
Query: 135 ETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
E +PCV +KA WA+ +ID + T AERL+AFA VEG+FFSGSF AIF++K +G+MPGLTF
Sbjct: 125 ENMPCVRRKAEWAMKYIDDEKITLAERLVAFAIVEGVFFSGSFAAIFYMKTKGVMPGLTF 184
Query: 194 SNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMN 252
SNELISRDEGLH +FACL Y+ + KL V + EAV IE EF +ALP +LVGMN
Sbjct: 185 SNELISRDEGLHTNFACLYYNTRVDQKLDAPTVNDMFSEAVAIEMEFFAEALPESLVGMN 244
Query: 253 GELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMS 312
+M +YIEFVADRLL L Y K+Y NPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 245 ANMMRKYIEFVADRLLVQLKYPKMYYTENPFEFMNNISLEGKTNFFEKRVGEYKRFG--- 301
Query: 313 SLNGNGGNHVFKIDEDF 329
G F++ EDF
Sbjct: 302 -----AGEDKFQLLEDF 313
>gi|228861726|ref|YP_002854746.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425174|gb|ACO53586.1| Rr2 [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 339
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 217/341 (63%), Gaps = 35/341 (10%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
R + PIQ+ +W+ YK A W EEVDL++D W+ L DE+HF+ H+LAFFA++
Sbjct: 7 RKVILPIQHANLWKAYKTALDCVWKVEEVDLTKDWEDWQNKLNEDERHFLKHILAFFASA 66
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV NL +V EAR FY QI IEN+HSEMYSLL+ YIKD EK+ L +A
Sbjct: 67 DSIVNINLIDYVRGKVAELEARYFYDQQIFIENVHSEMYSLLIFEYIKDEQEKDTLLNAF 126
Query: 135 ETVPCVAKKATWALNWID--------------------GSETFAE---RLIAFACVEGIF 171
+ CV KKA WAL W + G +T +E R++AFA VEG+F
Sbjct: 127 NDIECVRKKAQWALKWTESAWWQDWLVNPATRWCNRLMGKQTPSELAVRMVAFAIVEGVF 186
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RTKLSEERVKAL 228
FSGSF AIF++K +G+MPGLTFSNELISRDEGLH +FACL Y+ KLS ER+ +
Sbjct: 187 FSGSFAAIFYIKTKGVMPGLTFSNELISRDEGLHTNFACLYYNEYIPEHDKLSSERILDM 246
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
EAVEIE+EF ALPC+L+GMN E M +YIEFVADRLL L K + +NPF++M
Sbjct: 247 FIEAVEIEKEFFKTALPCSLLGMNTESMCRYIEFVADRLLVDLNQPKHFMASNPFNFMTN 306
Query: 289 ISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
IS++GKTNFFE+RVGEY++ G ++I EDF
Sbjct: 307 ISMEGKTNFFERRVGEYRRFG--------AGQDGYEILEDF 339
>gi|193890961|gb|ACF28634.1| ribonucleotide reductase [Amphidinium carterae]
Length = 213
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/213 (68%), Positives = 176/213 (82%)
Query: 23 QYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENL 82
Q+ +WEMYKK EASFWTAEE+DLS+D WE+LT+ E+HF+ HVLAFFAASDGIVLENL
Sbjct: 1 QHADLWEMYKKHEASFWTAEEIDLSKDNVDWESLTSSEQHFIKHVLAFFAASDGIVLENL 60
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
AG+F E+QV EARAFYGFQIA+ENIHSE YSLL+E YIK+ EK + +AIET+P VA+
Sbjct: 61 AGQFACEIQVPEARAFYGFQIAMENIHSETYSLLIEQYIKEPQEKADILNAIETMPAVAE 120
Query: 143 KATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDE 202
KA WA+ W+ +F ERL+AFA VEGI FSGSFCAI+WLKKRGLMPGLTFSNELISRDE
Sbjct: 121 KAKWAVQWMQRENSFTERLVAFAAVEGILFSGSFCAIYWLKKRGLMPGLTFSNELISRDE 180
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
GLH DFACL+Y L+ L E+ V ++++ AVE+
Sbjct: 181 GLHADFACLIYRKLQNHLPEDVVHSIMRGAVEV 213
>gi|68304258|ref|YP_249726.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973087|gb|AAY84053.1| RR2 [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 318
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 162/321 (50%), Positives = 216/321 (67%), Gaps = 15/321 (4%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAAS 74
R + PI +W+ YKKA W EE+D+S+D W + L E+ F+ HVLAFFAA+
Sbjct: 6 RKTLLPIVNEDLWQSYKKAVDCHWKVEEIDMSKDFDDWNKKLNDKERFFLKHVLAFFAAA 65
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV N+ + V EA FY Q IE +H+EMY++L+ YIKD E +R+ +AI
Sbjct: 66 DVIVNTNIIEHMQSAVPELEASFFYAQQTFIECVHTEMYNILVVEYIKDPQECDRILNAI 125
Query: 135 ETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLK--KRGLMPGL 191
E + V +KA WA WI+ S TFAER++AFA VEG+FFSGSF AI+++K K+G +PGL
Sbjct: 126 EHIDSVKQKAAWAQKWIENQSATFAERMVAFAIVEGVFFSGSFAAIYYIKDSKKGALPGL 185
Query: 192 TFSNELISRDEGLHCDFACLLYSLL---RTKLSEERVKALVKEAVEIEREFVCDALPCAL 248
T+SNELISRDEGLH DFACL Y+ + KLS+ +V ++ EAV+IE++F +ALP A+
Sbjct: 186 TYSNELISRDEGLHTDFACLYYNKYIPEKNKLSKTKVLSMFVEAVDIEKDFFTNALPVAM 245
Query: 249 VGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
+GMN + M +YIEFVADRLL LGY K + ANPF++M ISL+GKTNFFEKRVGEY++
Sbjct: 246 LGMNSQSMCEYIEFVADRLLFELGYDKHFNTANPFEFMNNISLEGKTNFFEKRVGEYKRF 305
Query: 309 SVMSSLNGNGGNHVFKIDEDF 329
N ++I EDF
Sbjct: 306 G--------AANETYEILEDF 318
>gi|403182337|gb|EJY57322.1| AAEL017375-PA [Aedes aegypti]
Length = 373
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 161/288 (55%), Positives = 199/288 (69%), Gaps = 28/288 (9%)
Query: 42 EEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGF 101
+EVDLS+DL WE L + EKHF++HVLAFF ASDG + ENL RF E+QV EAR FYGF
Sbjct: 114 KEVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYGF 173
Query: 102 QIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERL 161
Q+A+EN+HSEMYSLL++TYI+DS +++ KKA F ER+
Sbjct: 174 QMAMENVHSEMYSLLIDTYIRDSKQRD-------------KKAN-----------FGERV 209
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS 221
+AFA VE IFFSGSF +I WLKKRGL PGLTFS ELISRDEGLH +F L++ L K S
Sbjct: 210 VAFAVVEEIFFSGSFASINWLKKRGLTPGLTFSYELISRDEGLHMEFVSLMFKYLVQKPS 269
Query: 222 EERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVAN 281
+E V ++E V I++EF+ LP L+GMN +L+SQYIEFVAD LL L K+Y N
Sbjct: 270 QEHVIEFIRETVLIKQEFLTKTLPVDLLGMNCDLLSQYIEFVADGLLLELVIDKIYNTKN 329
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
PF +ME ISL+GKTNFFEK+VGEYQK VM N ++VF +D DF
Sbjct: 330 PFSFMEFISLEGKTNFFEKKVGEYQKWGVM----ANRLDNVFTLDADF 373
>gi|156340310|ref|XP_001620415.1| hypothetical protein NEMVEDRAFT_v1g148226 [Nematostella vectensis]
gi|156205304|gb|EDO28315.1| predicted protein [Nematostella vectensis]
Length = 224
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/221 (66%), Positives = 179/221 (80%), Gaps = 3/221 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVT 65
EP+L N DRF +FPI++ IWE YKK EASFWTAEE+DL QD+ W L DEK+F+
Sbjct: 5 EPILQENKDRFVIFPIKHHDIWEWYKKMEASFWTAEEIDLHQDITDWNTKLNEDEKYFIK 64
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENLA F+ EVQ AEA+ FYGFQI +ENIHSE YSLL++TY+KD
Sbjct: 65 HILAFFAASDGIVNENLAENFVNEVQYAEAKFFYGFQIMMENIHSETYSLLIDTYVKDEV 124
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LFHAIE P + +KA WAL WI+ S++FAERLIAFA VEGIFFSG+FC+IFWLKKR
Sbjct: 125 EKDKLFHAIEVFPAIKRKAEWALKWIE-SDSFAERLIAFAAVEGIFFSGAFCSIFWLKKR 183
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYS-LLRTKLSEERV 225
GLMPGLTFSNELISRDEG+HCDFA +++ L K+ +ER+
Sbjct: 184 GLMPGLTFSNELISRDEGVHCDFAVHIHNHHLINKVPKERI 224
>gi|197322443|ref|YP_002154716.1| putative ribonucleotide reductase small subunit [Feldmannia species
virus]
gi|197130510|gb|ACH46846.1| putative ribonucleotide reductase small subunit [Feldmannia species
virus]
Length = 342
Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 141/314 (44%), Positives = 217/314 (69%), Gaps = 7/314 (2%)
Query: 7 EPLLAPNP--DRFCMF----PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
EP+ + DRF +F +Y ++ +YKK A FWT EE+DLS+D+ W+ ++DE
Sbjct: 17 EPMCHEDSEFDRFILFNQKSEFEYADVYALYKKEIACFWTVEEMDLSEDVECWDKSSSDE 76
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+ H+LAFFA+ D IV+EN++ F E+ + + R+ + Q AIE+IH E YS+L++TY
Sbjct: 77 QHFIIHILAFFASLDQIVMENVSVNFGDEIVIPQVRSHFAIQNAIESIHGEAYSILIQTY 136
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAI 179
+K+S +++++ +++ +P + KKA W +W+D + AERL+AF CVEG+ FSG+FCAI
Sbjct: 137 VKNSQQQSKILRSVQEMPIIRKKAQWVTSWMDPETCSLAERLVAFTCVEGVQFSGAFCAI 196
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
+WLKK+G GL F+N LI+RDEGLH + + ++Y+ L+ +L V + +A IE+EF
Sbjct: 197 YWLKKQGRFRGLCFANSLIARDEGLHAEGSVMIYNHLKHRLPVAVVHDIFGQATTIEKEF 256
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALP +L+G+N MS YIE+++D L LGY KL+ NPF+WM +I ++GK+NFFE
Sbjct: 257 IREALPVSLIGINAGTMSTYIEYISDFWLEKLGYPKLFNSKNPFEWMTMIGMEGKSNFFE 316
Query: 300 KRVGEYQKASVMSS 313
RV EY KA M+S
Sbjct: 317 GRVAEYSKAGSMTS 330
>gi|165969130|ref|YP_001651030.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
gi|164663626|gb|ABY65846.1| ribonucleotide reductase small subunit 2 [Orgyia leucostigma NPV]
Length = 339
Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 163/319 (51%), Positives = 200/319 (62%), Gaps = 27/319 (8%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAAS 74
R + PIQ+ ++W YK A W EEVDLS+D W L E+ F+ H+LAFFA++
Sbjct: 7 RKVILPIQHEKLWRAYKTALDCMWKVEEVDLSRDYEDWCTKLNERERFFIKHILAFFASA 66
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV NL V EAR FY QI IEN+HSEMYSLL+ YIK+ E+N L +A
Sbjct: 67 DSIVNINLIDYVRDAVGELEARYFYDQQILIENVHSEMYSLLIFEYIKNEKEQNELLNAF 126
Query: 135 ETVPCVAKKATWALNWI---------------------DGSET--FAERLIAFACVEGIF 171
E V CV KKA WAL W DGS A R++AFA VEG+F
Sbjct: 127 EDVKCVRKKAQWALKWTESSWWRDWLVNPLVKLWRTWRDGSSASKLARRMVAFAIVEGVF 186
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL---RTKLSEERVKAL 228
FSGSF AIF++K +G+MPGLTFSNELISRDEGLH +FACL Y+ R K+S + +
Sbjct: 187 FSGSFAAIFFIKTKGIMPGLTFSNELISRDEGLHTNFACLYYNEYIDERDKMSSAEILDM 246
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
EAV IE+EF ALPC L+GMN M +YIEFVADRLL L K + NPF++M
Sbjct: 247 FVEAVNIEKEFFTSALPCDLLGMNSRAMCEYIEFVADRLLTELQQPKHFNTPNPFNFMNN 306
Query: 289 ISLQGKTNFFEKRVGEYQK 307
ISL+GKTNFFE+RVGEY++
Sbjct: 307 ISLEGKTNFFERRVGEYKR 325
>gi|356577191|ref|XP_003556711.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 226
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/207 (75%), Positives = 172/207 (83%)
Query: 35 EASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAE 94
+AS + EEVDLS DLRHW L+ ++HF+THVL FFAASD IVLENL RF E+Q+ E
Sbjct: 13 DASCFYTEEVDLSSDLRHWATLSDGKRHFITHVLTFFAASDDIVLENLGSRFTKEIQLLE 72
Query: 95 ARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGS 154
ARAFYGFQIAIENIHSEMYSL LETY KDS +KN LF AI T+PC+ KKA WAL I+ S
Sbjct: 73 ARAFYGFQIAIENIHSEMYSLFLETYTKDSXKKNCLFRAINTIPCITKKAQWALQXINAS 132
Query: 155 ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 214
E+FAERL+AFACV GIFFSGSFCAIFWLKKRGLM GLTFSNE ISRDEGLH DFACLLY
Sbjct: 133 ESFAERLMAFACVXGIFFSGSFCAIFWLKKRGLMSGLTFSNEFISRDEGLHYDFACLLYL 192
Query: 215 LLRTKLSEERVKALVKEAVEIEREFVC 241
LLR KLSE RVK +V +AVEIEREFVC
Sbjct: 193 LLRKKLSEGRVKEIVCDAVEIEREFVC 219
>gi|324525159|gb|ADY48515.1| Ribonucleoside-diphosphate reductase small chain [Ascaris suum]
Length = 240
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 148/231 (64%), Positives = 173/231 (74%), Gaps = 1/231 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLLA NP RF +FPI+Y IW YK A ASFWTA+E+DLS+D WE LT E+ F++
Sbjct: 10 DEPLLAENPSRFVIFPIKYHDIWAFYKNAVASFWTADEIDLSRDYADWEKLTDGERFFIS 69
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VL+FFAASDGIV ENL GRF TEVQV EAR FYGFQI +E +HSEMYS ++E YIKD
Sbjct: 70 RVLSFFAASDGIVNENLTGRFSTEVQVPEARFFYGFQIMMEGVHSEMYSKMIEAYIKDPK 129
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ F AI C+ KKA WAL WID + F RLIAFA VEGI FSGSF AIFWLKK
Sbjct: 130 EQMVHFDAIHQFECIKKKADWALRWIDDRNSPFPVRLIAFAAVEGIMFSGSFAAIFWLKK 189
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEI 235
RG+M GLT SNELISRDEGLH DFACLLY ++ K S+E+V ++KEAV +
Sbjct: 190 RGVMKGLTHSNELISRDEGLHRDFACLLYKYIKHKPSQEQVYEIIKEAVSL 240
>gi|118197598|ref|YP_874310.1| ribonucleotide reductase small subunit [Ectropis obliqua NPV]
gi|113472593|gb|ABI35800.1| ribonucleotide reductase small subunit [Ectropis obliqua NPV]
Length = 341
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/342 (47%), Positives = 210/342 (61%), Gaps = 36/342 (10%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAAS 74
R + PI+ +W M K A W EE DLS+D W L E+ F+ H+LAFFA++
Sbjct: 8 RKVILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASA 67
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D IV NL V EAR FY QI IEN+HSEMYSLL+ YIK+S+E+N+L +A
Sbjct: 68 DTIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAF 127
Query: 135 ETVPCVAKKATWALNWIDGS------------------------ETFAERLIAFACVEGI 170
+ + C+ KKA WAL W + A R+IAFA VEGI
Sbjct: 128 DRIDCIKKKAQWALKWTESKWWQDYWVDPVLGCVQRRFRNKSYPSKLARRMIAFAIVEGI 187
Query: 171 FFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS---LLRTKLSEERVKA 227
FFSGSF AIF++K +GLMPGLTFSNELISRDEGLH DFAC+ Y+ + KLS +++ +
Sbjct: 188 FFSGSFAAIFFIKTKGLMPGLTFSNELISRDEGLHTDFACMYYNNYIPINEKLSPQQILS 247
Query: 228 LVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
+ EAV+IE+EF ALPC L+G+N M +YIEFVADRLL L K + NPF++M
Sbjct: 248 MFIEAVDIEKEFFTTALPCYLLGINATEMCKYIEFVADRLLVELRQPKHFNTPNPFNFMT 307
Query: 288 LISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
ISL+GKTNFFE+RVGEY++ G V++I E+F
Sbjct: 308 NISLEGKTNFFERRVGEYKRFG--------AGQDVYEILEEF 341
>gi|38683666|gb|AAR26843.1| FirrV-1-A19 [Feldmannia irregularis virus a]
Length = 342
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 137/308 (44%), Positives = 211/308 (68%), Gaps = 5/308 (1%)
Query: 23 QYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENL 82
++ ++ +YKK A FWT EE+DL++D+ W+ + DE+ F+ H+LAFFA+ D IV+EN+
Sbjct: 39 EFADVYALYKKEIACFWTVEEIDLNEDVACWDKCSEDEQRFIGHILAFFASLDQIVMENV 98
Query: 83 AGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAK 142
+ F E+++ + R+ + Q AIE+IH E Y+LL++TYIKD +++ + +I+ +P + K
Sbjct: 99 SVNFGDEIKIPQIRSHFAMQNAIESIHGETYALLIQTYIKDPEKQVTMLRSIQEMPIITK 158
Query: 143 KATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 201
KA W W+D + AERL+AF CVEG+ FSG+FCAI+WLKK+G GL F+N LI+RD
Sbjct: 159 KAQWVTAWMDPEVASLAERLVAFTCVEGVQFSGAFCAIYWLKKQGRFRGLCFANSLIARD 218
Query: 202 EGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIE 261
EGLH + + ++Y+ L+ +L V + +AV +E+EF+ ++LP +L+G+N + MS YIE
Sbjct: 219 EGLHAEGSVMIYNHLKHRLPVAVVHDIFTDAVALEKEFIRESLPVSLIGINADTMSSYIE 278
Query: 262 FVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNH 321
+V+D + LGY KL+G NPF+WM +I ++GK+NFFE RV EY KA M+ N +
Sbjct: 279 YVSDFWIQRLGYPKLFGTKNPFEWMTMIGMEGKSNFFEGRVAEYAKAGSMT----NEDDR 334
Query: 322 VFKIDEDF 329
F D F
Sbjct: 335 AFTTDAVF 342
>gi|291239432|ref|XP_002739627.1| PREDICTED: hCG23833-like [Saccoglossus kowalevskii]
Length = 309
Score = 297 bits (761), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 207/307 (67%), Gaps = 9/307 (2%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDL-SQDLRHWEALTADEKHFVTHVLAFFAA 73
+R+ PI+ +++M+KK FWT +E+++ S DLR W LT DE+ F +L FFA+
Sbjct: 2 ERYVTPPIKNLDLYDMWKKHVRCFWTKDEINITSSDLREWNDLTPDERQFFKCILGFFAS 61
Query: 74 SDGIVLENLAGRFMTEVQVA-EARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
++ IV +NLA RF+ + ++ EAR FY FQIA+ENIHSE Y LL Y+ + E+N L +
Sbjct: 62 TNIIVSDNLALRFLADPNISREARCFYSFQIAMENIHSETYIELLTAYVPEEKERNELLY 121
Query: 133 AIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
+I + PC+ K+ WA+ W+ D T+AERL+AFA VEGI FS SF I+W+K+ GL+ GL
Sbjct: 122 SIISWPCLNVKSRWAVKWMNDEFATYAERLVAFAVVEGIMFSSSFAGIYWIKQSGLLAGL 181
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
T +NE ISRDEGLHC FAC +Y ++ +L + +V+ +V E E+E+ FV AL L+GM
Sbjct: 182 TQANEFISRDEGLHCTFACTMYGKIKPRLPDTKVRKIVLEGCEVEKLFVKHALRKPLLGM 241
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N LM Y+ FV D LL LGY K +GV NPF +M+ IS+QGKTNFFE+RV EY +
Sbjct: 242 NSHLMETYVNFVTDNLLTDLGYEKEFGVNNPFPFMDNISMQGKTNFFERRVTEYTR---- 297
Query: 312 SSLNGNG 318
L G+G
Sbjct: 298 --LTGHG 302
>gi|269865568|ref|XP_002651969.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063399|gb|EED42087.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 251
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/215 (64%), Positives = 166/215 (77%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL R+ +FPIQYP+IWE YK E++FWT EEVD++ D H+ LT +E+ F+ +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I+D +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LF+AIE +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRG
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRG 205
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS 221
LMPGLTFSNELISRDEGLH DFACLL+ + K +
Sbjct: 206 LMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT 240
>gi|269864946|ref|XP_002651751.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269865852|ref|XP_002652068.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|269866233|ref|XP_002652201.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062966|gb|EED41855.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063214|gb|EED41988.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063944|gb|EED42305.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 226
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/232 (63%), Positives = 176/232 (75%), Gaps = 7/232 (3%)
Query: 98 FYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETF 157
FYGFQIAIENIHSEMYS L+ET I+D +E+ LF+AIE +P + KKA WA WI +F
Sbjct: 2 FYGFQIAIENIHSEMYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSF 61
Query: 158 AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 217
R +AFACVEGIFFSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ +
Sbjct: 62 DTRCVAFACVEGIFFSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYIN 121
Query: 218 TKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLY 277
K + ++ +V+EAV IE+EF+ ++LP +L+GMN +LM QYIEFVADRLL ALG K+Y
Sbjct: 122 NKCT--VIEDIVREAVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIY 179
Query: 278 GVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
V+NPFD+ME ISLQGKTNFFE+R YQK V G F ++EDF
Sbjct: 180 NVSNPFDFMENISLQGKTNFFERREANYQKGYV-----GIDNEFKFNLNEDF 226
>gi|409049898|gb|EKM59375.1| hypothetical protein PHACADRAFT_249825 [Phanerochaete carnosa
HHB-10118-sp]
Length = 221
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 171/217 (78%), Gaps = 2/217 (0%)
Query: 30 MYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAASDGIVLENLAGRFMT 88
MYKKAEASFWTAEE+DL DL W + L DE+ F++HVLAFFAASDGIV ENL RF
Sbjct: 1 MYKKAEASFWTAEELDLGHDLVDWNDKLNPDERRFISHVLAFFAASDGIVNENLVERFSN 60
Query: 89 EVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWAL 148
EVQ AEAR FYGFQ+ IENIHSE YSLL++TYIKD E++ LF AI+T+PC+ KKA WAL
Sbjct: 61 EVQAAEARCFYGFQVMIENIHSETYSLLIDTYIKDPQERDFLFDAIDTIPCIKKKADWAL 120
Query: 149 NWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCD 207
WI + +F ERLIAFA VEGIFFSG F +IFWLKKRGLMPGLTFSNELISRDEG+H D
Sbjct: 121 RWISNKQSSFGERLIAFATVEGIFFSGCFASIFWLKKRGLMPGLTFSNELISRDEGMHTD 180
Query: 208 FACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
FACLL+ L+ + + +K ++ EAVEIE+EF+ +
Sbjct: 181 FACLLFHHLKRRPHPDIIKTIITEAVEIEKEFLTGGI 217
>gi|488081|gb|AAA56996.1| ribonucleoside-diphosphate reductase small subunit, partial
[Drosophila melanogaster]
Length = 214
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/214 (65%), Positives = 171/214 (79%), Gaps = 1/214 (0%)
Query: 82 LAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVA 141
L RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI+D ++ LF+AIET+P V
Sbjct: 1 LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVK 60
Query: 142 KKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 200
+KA WAL+WI S F ER+IAFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISR
Sbjct: 61 RKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISR 120
Query: 201 DEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYI 260
DEGLHCDFA L++ L + ER+ ++++AV IE+EF+ DALP L+GMN +LMSQYI
Sbjct: 121 DEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFLTDALPVNLIGMNCDLMSQYI 180
Query: 261 EFVADRLLGALGYGKLYGVANPFDWMELISLQGK 294
EFVADRLL LG GK+Y NPF++ME+ISL GK
Sbjct: 181 EFVADRLLVELGVGKIYNTKNPFNFMEMISLDGK 214
>gi|323354474|gb|EGA86313.1| Rnr2p [Saccharomyces cerevisiae VL3]
Length = 306
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK 219
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNK 290
>gi|323333040|gb|EGA74442.1| Rnr2p [Saccharomyces cerevisiae AWRI796]
Length = 306
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/216 (63%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK 219
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNK 290
>gi|51830370|gb|AAU09736.1| YGR180C [Saccharomyces cerevisiae]
Length = 345
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/309 (46%), Positives = 208/309 (67%), Gaps = 4/309 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K ++
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENIHSE+YS++++ + KD
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIHSEVYSMMVDAFFKDP- 142
Query: 126 EKN-RLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
KN LF I +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 -KNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLT 201
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+ +MPGL +N I RD G + DF+CLL++ LRTK + + ++ ++ EAVEIE+E+ ++
Sbjct: 202 DKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNS 261
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP GM+ + + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V
Sbjct: 262 LPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVS 321
Query: 304 EYQKASVMS 312
+YQKAS MS
Sbjct: 322 DYQKASDMS 330
>gi|401840133|gb|EJT43042.1| RNR4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 345
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 209/311 (67%), Gaps = 2/311 (0%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S +E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K
Sbjct: 21 SEKDEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQTLTEDQKA 80
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
++ ++LA +SD IV + L F ++Q E ++FYGFQI +ENI++E+YS++++ + K
Sbjct: 81 YIGNLLALSISSDNIVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYAEVYSMMVDAFFK 140
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFW 181
+ LF I T+P V KA + WI ++ +AERL+AFA EGIF +G++ ++FW
Sbjct: 141 EPTNI-PLFKEIATLPEVKNKAAFIEKWITNDDSLYAERLVAFAAKEGIFQAGNYASVFW 199
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
L + ++PGLT +N I RD G + DF+CLL++ LRTK + + + ++ EAVEIE+E+
Sbjct: 200 LTNKNILPGLTMANRNICRDRGAYTDFSCLLFAHLRTKPNVKITERIITEAVEIEKEYYS 259
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
++LP GM+ + + YIEFVAD LL G K Y +NPF++ME ++ GKT FFEKR
Sbjct: 260 NSLPVEKFGMDLKNIHTYIEFVADGLLQGFGNEKYYNASNPFEFMEDVATAGKTTFFEKR 319
Query: 302 VGEYQKASVMS 312
V +YQKAS MS
Sbjct: 320 VSDYQKASDMS 330
>gi|398366047|ref|NP_011696.3| ribonucleotide-diphosphate reductase subunit RNR4 [Saccharomyces
cerevisiae S288c]
gi|1710402|sp|P49723.1|RIR4_YEAST RecName: Full=Ribonucleoside-diphosphate reductase small chain 2;
AltName: Full=Ribonucleotide reductase R2 subunit 2;
AltName: Full=Ribonucleotide reductase small subunit 2
gi|15826570|pdb|1JK0|B Chain B, Ribonucleotide Reductase Y2y4 Heterodimer
gi|52695527|pdb|1SMS|A Chain A, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
gi|52695528|pdb|1SMS|B Chain B, Structure Of The Ribonucleotide Reductase Rnr4 Homodimer
From Saccharomyces Cerevisiae
gi|915546|gb|AAB72236.1| Rnr4p [Saccharomyces cerevisiae]
gi|1323319|emb|CAA97206.1| RNR4 [Saccharomyces cerevisiae]
gi|285812375|tpg|DAA08275.1| TPA: ribonucleotide-diphosphate reductase subunit RNR4
[Saccharomyces cerevisiae S288c]
gi|323304781|gb|EGA58540.1| Rnr4p [Saccharomyces cerevisiae FostersB]
gi|323308943|gb|EGA62174.1| Rnr4p [Saccharomyces cerevisiae FostersO]
gi|349578387|dbj|GAA23553.1| K7_Rnr4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299434|gb|EIW10528.1| Rnr4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 345
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 208/309 (67%), Gaps = 4/309 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K ++
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + KD
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 142
Query: 126 EKN-RLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
KN LF I +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 -KNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLT 201
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+ +MPGL +N I RD G + DF+CLL++ LRTK + + ++ ++ EAVEIE+E+ ++
Sbjct: 202 DKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNS 261
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP GM+ + + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V
Sbjct: 262 LPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVS 321
Query: 304 EYQKASVMS 312
+YQKAS MS
Sbjct: 322 DYQKASDMS 330
>gi|294877483|ref|XP_002768004.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
gi|239870142|gb|EER00722.1| ribonucleotide reductase R2 subunit, putative [Perkinsus marinus
ATCC 50983]
Length = 247
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 160/205 (78%), Gaps = 5/205 (2%)
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCA 178
T+I+D+ EK R+F AIET+P V KA WAL WI+ FAERL+A+ACVEGI FSGSFCA
Sbjct: 39 TFIEDAQEKERIFEAIETIPSVQHKAEWALAWINDDNCFAERLVAYACVEGILFSGSFCA 98
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-TKLSEERVKALVKEAVEIER 237
+FWLKKRGLMPGLTFSNELISRDEGLH DF CLLY++L+ T+L EERV+ +V+ AV +ER
Sbjct: 99 LFWLKKRGLMPGLTFSNELISRDEGLHTDFGCLLYNMLKFTRLPEERVEDIVRSAVNVER 158
Query: 238 EFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNF 297
EF+ DALP L+GMN ELM +YIEFVADRLL ALGY K+Y ANPFDWM +ISLQGKTNF
Sbjct: 159 EFITDALPVGLIGMNAELMGRYIEFVADRLLVALGYAKIYNSANPFDWMTMISLQGKTNF 218
Query: 298 FEKRVGEYQKASVMSSLNGNGGNHV 322
FEKRV K G GG V
Sbjct: 219 FEKRVERVPK----RQCGGGGGKRV 239
>gi|323337480|gb|EGA78728.1| Rnr4p [Saccharomyces cerevisiae Vin13]
Length = 328
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/309 (45%), Positives = 207/309 (66%), Gaps = 4/309 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K ++
Sbjct: 7 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 66
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + KD
Sbjct: 67 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 125
Query: 126 EKN-RLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
KN LF I +P V K + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 126 -KNIPLFKEIANLPEVKHKTAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLT 184
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+ +MPGL +N I RD G + DF+CLL++ LRTK + + ++ ++ EAVEIE+E+ ++
Sbjct: 185 DKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNS 244
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP GM+ + + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V
Sbjct: 245 LPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVS 304
Query: 304 EYQKASVMS 312
+YQKAS MS
Sbjct: 305 DYQKASDMS 313
>gi|323337103|gb|EGA78359.1| Rnr2p [Saccharomyces cerevisiae Vin13]
Length = 296
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 135/209 (64%), Positives = 164/209 (78%), Gaps = 2/209 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLL 212
KRG+MPGLTFSNELI RDEGLH DFACL
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLF 283
>gi|151943458|gb|EDN61769.1| ribonucleotide reductase [Saccharomyces cerevisiae YJM789]
gi|190406805|gb|EDV10072.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|256270921|gb|EEU06048.1| Rnr4p [Saccharomyces cerevisiae JAY291]
gi|259146684|emb|CAY79941.1| Rnr4p [Saccharomyces cerevisiae EC1118]
gi|323333575|gb|EGA74969.1| Rnr4p [Saccharomyces cerevisiae AWRI796]
gi|323348450|gb|EGA82695.1| Rnr4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765447|gb|EHN06955.1| Rnr4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 345
Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 141/309 (45%), Positives = 207/309 (66%), Gaps = 4/309 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K ++
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + KD
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 142
Query: 126 EKN-RLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
KN LF I +P V K + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 -KNIPLFKEIANLPEVKHKTAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLT 201
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+ +MPGL +N I RD G + DF+CLL++ LRTK + + ++ ++ EAVEIE+E+ ++
Sbjct: 202 DKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNS 261
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP GM+ + + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V
Sbjct: 262 LPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVS 321
Query: 304 EYQKASVMS 312
+YQKAS MS
Sbjct: 322 DYQKASDMS 330
>gi|401625558|gb|EJS43558.1| rnr4p [Saccharomyces arboricola H-6]
Length = 346
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 145/326 (44%), Positives = 213/326 (65%), Gaps = 5/326 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K +V
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDSEDFQELTDDQKAYVG 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
++LA +SD IV + L F ++Q E ++FYGFQI +ENI++E+YS++++ + KD
Sbjct: 84 NLLALSISSDNIVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYAEVYSMMVDAFFKDP- 142
Query: 126 EKN-RLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
KN LF + T+P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 -KNIPLFKEVATLPEVKDKAAFVEKWIFNDDSLYAERLVAFAAKEGIFQAGNYASMFWLT 201
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+ +MPGL +N I RD G + DF+CLL++ LRTK + + + ++ EAVEIE+E+ ++
Sbjct: 202 DKNIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNVKITERIITEAVEIEKEYYSNS 261
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP G++ + + YIEFVAD LL G K Y NPF++ME ++ GKT FFEKRV
Sbjct: 262 LPVEKFGIDLKSIHSYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKRVS 321
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKAS +S + D+DF
Sbjct: 322 DYQKASDVSKTASPPSKDI-NFDDDF 346
>gi|217071966|gb|ACJ84343.1| unknown [Medicago truncatula]
Length = 206
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 130/180 (72%), Positives = 153/180 (85%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEP+L RFCMFP++Y Q+WEMYKKAEASFWTAEEVDLS D++HW L+ EKHF++
Sbjct: 18 EEPILMKQTQRFCMFPVRYKQLWEMYKKAEASFWTAEEVDLSYDVQHWATLSDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIVLENLA RF+ +VQ+ EARAFYGFQIAIENIHSEMYSLLLETYIKDS
Sbjct: 78 HVLAFFATSDGIVLENLAARFLNDVQIPEARAFYGFQIAIENIHSEMYSLLLETYIKDSR 137
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK++LF+AIE +PCVA+KA WAL+WI+ S +FAERL+ FACVEGIFFS + F LK+R
Sbjct: 138 EKHKLFNAIENLPCVARKAEWALSWINSSTSFAERLVGFACVEGIFFSEASVPYFGLKER 197
>gi|50288235|ref|XP_446546.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525854|emb|CAG59473.1| unnamed protein product [Candida glabrata]
Length = 335
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/330 (43%), Positives = 210/330 (63%), Gaps = 7/330 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EA+FWTAE+++L++D++ WE L+A +K F
Sbjct: 7 DEVLLMENKRRFVMFPIKYHEIWAAYKKVEAAFWTAEDMELAKDVKDWETLSAGQKEFFG 66
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+ LA + +D IV +N+ +F E+Q E ++FYGFQI +ENI+ E+YS+L++ D
Sbjct: 67 NYLAICSRTDNIVNKNIVEKFSAELQNPEGKSFYGFQIMMENIYDEIYSMLVDALFTSVD 126
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWL-K 183
LF A+ V K+ WA W+ D +AERL+A A EGIF SG+F A++WL K
Sbjct: 127 NI-PLFKAVCQQEEVKAKSEWAHRWVFDDESLYAERLVASAAREGIFMSGAFAALYWLTK 185
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
++G+MPG+ + I RD G + DFACLL++ L+TK + + ++ ++ EAVEIE+ ++
Sbjct: 186 EKGIMPGVAMATNHICRDRGFYADFACLLFAHLKTKPNPKIIEQIITEAVEIEKAHYRNS 245
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
+P +GM+ + + QYIE VAD+LL + G K Y NPF +ME + GKTNFFEK+V
Sbjct: 246 MPIEKLGMDLKEIDQYIESVADKLLVSFGNEKFYNATNPFPFMEEATSIGKTNFFEKKVS 305
Query: 304 EYQKASVMSSLNGNGG----NHVFKIDEDF 329
+YQKAS S G + K D DF
Sbjct: 306 DYQKASATSGTAKTAGSVASSDKIKFDSDF 335
>gi|225434341|ref|XP_002276454.1| PREDICTED: uncharacterized protein LOC100256951 [Vitis vinifera]
Length = 841
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 154 SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 213
S FAERLIAFACVEGIFFSGSFCAIFWLKK+GLMPGLTFSNELISR EGLHCDFACLLY
Sbjct: 667 STLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLLY 726
Query: 214 SLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGY 273
SLL+ +L ++V +V EA+EIE +F+C+ALPCAL+GM LMS YI+FV DRLL ALGY
Sbjct: 727 SLLQKQLPWQKVHHIVHEAMEIETQFICEALPCALIGMKATLMSHYIKFVVDRLLVALGY 786
Query: 274 GKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+ Y V NPFDWME I LQG NFF++R+G+YQKAS+MSSL+G G N+VFKIDEDF
Sbjct: 787 ERKYNVENPFDWMEFIFLQGNANFFQRRMGDYQKASIMSSLDG-GKNYVFKIDEDF 841
>gi|380863082|gb|AFF18834.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
Length = 180
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/166 (75%), Positives = 145/166 (87%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHF 63
+ EEP+L RFCMFPI+Y Q+WEMYKKA+ASFWTAEEVDLSQD++ WE L+ EKHF
Sbjct: 15 VEEEPILMEQNQRFCMFPIRYKQLWEMYKKAQASFWTAEEVDLSQDVQQWERLSDSEKHF 74
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+THVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLETYIKD
Sbjct: 75 ITHVLAFFAASDGIVLENLAARFLNDIQIPEARAFYGFQIAMENIHSEMYSLLLETYIKD 134
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEG 169
S EK+RLF+AIE++PCVA KA WAL WI S +FAERL+AFACVEG
Sbjct: 135 SKEKHRLFNAIESIPCVASKAKWALEWIHSSTSFAERLVAFACVEG 180
>gi|68161126|gb|AAY86994.1| ribonucleotide reductase M2b [Ictalurus punctatus]
Length = 192
Score = 273 bits (698), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 132/192 (68%), Positives = 157/192 (81%), Gaps = 1/192 (0%)
Query: 114 SLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFF 172
SLL+ TYI+D E++ LF+AIET+P V +KA WAL WI D + TFAERL+AFA VEGIFF
Sbjct: 1 SLLINTYIRDLKERDYLFNAIETLPYVKRKADWALQWISDTNSTFAERLVAFAAVEGIFF 60
Query: 173 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEA 232
SGSF AIFWLKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L+ K S +RVK ++ +A
Sbjct: 61 SGSFAAIFWLKKRGLMPGLTYSNELISRDEGLHCNFACLIYSQLQKKPSADRVKDIITKA 120
Query: 233 VEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ 292
V IE+EF+ +ALP L+G+N LM QYIEFVADRLL LG K+Y NPFD+ME ISL+
Sbjct: 121 VRIEQEFLTEALPVDLIGINSYLMKQYIEFVADRLLTDLGIPKVYEAENPFDFMEFISLE 180
Query: 293 GKTNFFEKRVGE 304
GKTNFFEKRV E
Sbjct: 181 GKTNFFEKRVAE 192
>gi|297745764|emb|CBI15820.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/176 (73%), Positives = 150/176 (85%), Gaps = 1/176 (0%)
Query: 154 SETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY 213
S FAERLIAFACVEGIFFSGSFCAIFWLKK+GLMPGLTFSNELISR EGLHCDFACLLY
Sbjct: 95 STLFAERLIAFACVEGIFFSGSFCAIFWLKKKGLMPGLTFSNELISRYEGLHCDFACLLY 154
Query: 214 SLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGY 273
SLL+ +L ++V +V EA+EIE +F+C+ALPCAL+GM LMS YI+FV DRLL ALGY
Sbjct: 155 SLLQKQLPWQKVHHIVHEAMEIETQFICEALPCALIGMKATLMSHYIKFVVDRLLVALGY 214
Query: 274 GKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+ Y V NPFDWME I LQG NFF++R+G+YQKAS+MSSL+G G N+VFKIDEDF
Sbjct: 215 ERKYNVENPFDWMEFIFLQGNANFFQRRMGDYQKASIMSSLDG-GKNYVFKIDEDF 269
>gi|359496795|ref|XP_003635337.1| PREDICTED: uncharacterized protein LOC100267871 [Vitis vinifera]
Length = 668
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/177 (75%), Positives = 147/177 (83%), Gaps = 2/177 (1%)
Query: 153 GSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLL 212
S FAERLI FACVE IFF GSFC IFW KKRGLMPGLTFSNELISRDEGLHCDFACLL
Sbjct: 494 SSTLFAERLITFACVERIFFLGSFCDIFW-KKRGLMPGLTFSNELISRDEGLHCDFACLL 552
Query: 213 YSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALG 272
Y LL+ L+ ERV +V EAVEIE +FVC+AL CAL+GMN LMSQYI+FVAD LL A+G
Sbjct: 553 YKLLKNSLTLERVHHIVHEAVEIETQFVCEALLCALIGMNATLMSQYIKFVADHLLVAIG 612
Query: 273 YGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
Y + Y V NPFDWME ISLQG NFF++RVG+YQKASVMSSL+G G N+VFKIDEDF
Sbjct: 613 YERKYNVENPFDWMEFISLQGNANFFQRRVGDYQKASVMSSLDG-GKNYVFKIDEDF 668
>gi|38232564|gb|AAR15079.1| ribonucleotide reductase R2 subunit variant [Aedes albopictus]
Length = 219
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 158/204 (77%), Gaps = 5/204 (2%)
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K LF+AI+ +PCV KKA WALNWI + F ER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 20 KRYLFNAIDNLPCVKKKADWALNWISSKQANFGERVVAFAAVEGIFFSGSFASIFWLKKR 79
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLH DFACL++ L K S+ERV +++EAV IE+EF+ ALP
Sbjct: 80 GLMPGLTFSNELISRDEGLHTDFACLMFKYLVQKPSQERVIEIIREAVLIEQEFLTKALP 139
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN ELMSQYIEFVADRLL LG K+Y NPF +ME ISL+GKTNFFEK+VGEY
Sbjct: 140 VDLLGMNCELMSQYIEFVADRLLLELGIDKIYNTKNPFSFMEFISLEGKTNFFEKKVGEY 199
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VM+ N ++VF +D DF
Sbjct: 200 QKWGVMA----NRLDNVFTLDADF 219
>gi|269866693|ref|XP_002652360.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062665|gb|EED41696.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 211
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 162/218 (74%), Gaps = 7/218 (3%)
Query: 112 MYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIF 171
MYS L+ET I+D +E+ LF+AIE +P + KKA WA WI +F R +AFACVEGIF
Sbjct: 1 MYSKLIETLIRDKEEQTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIF 60
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKE 231
FSGSF AIFWLKKRGLMPGLTFSNELISRDEGLH DFACLL+ + K + ++ +V+E
Sbjct: 61 FSGSFAAIFWLKKRGLMPGLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVRE 118
Query: 232 AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISL 291
AV IE+EF+ ++LP +L+GMN +LM QYIEFVADRLL ALG K+Y V+NPFD+ME ISL
Sbjct: 119 AVAIEQEFLSESLPVSLIGMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDFMENISL 178
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
QGKTNFFE+R YQK V G F ++EDF
Sbjct: 179 QGKTNFFERREANYQKGYV-----GIDNEFKFNLNEDF 211
>gi|76163066|gb|AAX30834.2| SJCHGC08068 protein [Schistosoma japonicum]
Length = 230
Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/182 (69%), Positives = 145/182 (79%), Gaps = 1/182 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL PNP RF +FPI+Y IW YKKA ASFWT EEVDLS+D HWE+L E+HF+++
Sbjct: 40 EPLLKPNPHRFVLFPIEYHDIWHFYKKAVASFWTVEEVDLSKDFTHWESLKVGERHFISY 99
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENL RF EVQ+ E R FYG QIAIENIHSEMYSLL++TYIKDS E
Sbjct: 100 VLAFFAASDGIVLENLLERFSQEVQIPEVRCFYGMQIAIENIHSEMYSLLIDTYIKDSKE 159
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AI + CVAKKA WAL+WI D TFAERL+AFA VEG+FFSGSF AIFWLK
Sbjct: 160 RDFLFNAISNLTCVAKKAQWALDWIGDSKSTFAERLVAFAAVEGVFFSGSFAAIFWLKSE 219
Query: 186 GL 187
L
Sbjct: 220 DL 221
>gi|332031690|gb|EGI71130.1| Ribonucleoside-diphosphate reductase subunit M2 [Acromyrmex
echinatior]
Length = 210
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 150/186 (80%), Gaps = 1/186 (0%)
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AIET+PCV KKA WALNWI+ S TF ER++AFA VEGIFFSGSF AIFWLKKR
Sbjct: 7 RDFLFNAIETLPCVRKKANWALNWINHESATFPERVVAFAAVEGIFFSGSFAAIFWLKKR 66
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
G+MPGLTFSNELISRDEGLHCDFACL++ + K S ERVK++V +AVEIE+EF+ ALP
Sbjct: 67 GVMPGLTFSNELISRDEGLHCDFACLMFKHIVQKPSFERVKSIVMDAVEIEKEFLTQALP 126
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN M YIEFVADRL ALG+ K+Y NPF +M+ IS+ GKTNFFEK+VGEY
Sbjct: 127 VELIGMNRTFMCNYIEFVADRLFVALGFEKVYNSENPFSFMDFISMMGKTNFFEKKVGEY 186
Query: 306 QKASVM 311
+K VM
Sbjct: 187 KKFGVM 192
>gi|366987723|ref|XP_003673628.1| hypothetical protein NCAS_0A06890 [Naumovozyma castellii CBS 4309]
gi|342299491|emb|CCC67247.1| hypothetical protein NCAS_0A06890 [Naumovozyma castellii CBS 4309]
Length = 345
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/308 (40%), Positives = 203/308 (65%), Gaps = 3/308 (0%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S +E LL N RF MFPI+Y +IW YKK EA+FWTAEE++L +D++ ++ LT D+K
Sbjct: 23 SEKDEILLIENAHRFVMFPIKYHEIWAAYKKVEAAFWTAEEIELEKDVQDFQKLTDDQKQ 82
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ +LA S+ ++ +++ +F ++Q E ++FYGFQI +ENI+ E+YS++++T+
Sbjct: 83 FLARLLALLTVSEDVINKHIIEKFSAQLQNPEGKSFYGFQIMMENIYDEVYSMMVDTFF- 141
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFW 181
+ EK F + ++P +K + WI ++ +AERL+A A EGIFFSG + A+ W
Sbjct: 142 NGPEKVPFFKEVPSLPEQKEKVDYINRWIKNQDSLYAERLVALAAKEGIFFSGVYAALGW 201
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
L + G PGLT +N+ I RD+G + DF CLL++ L+ K + ++ ++ EAVEIE+ +
Sbjct: 202 LGQTGF-PGLTTANKSICRDKGAYSDFNCLLFAHLKQKPDAKIIEKIILEAVEIEKNVLK 260
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
+ L G++ L++QY+EF AD LL + G K++ V NPFD+ME + GK+NFFEK+
Sbjct: 261 NVLKVDKFGVDAALINQYVEFTADGLLSSFGNQKVFNVNNPFDFMEGATAIGKSNFFEKK 320
Query: 302 VGEYQKAS 309
V ++ +++
Sbjct: 321 VSDFTQSA 328
>gi|380863084|gb|AFF18835.1| ribonucleotide reductase small subunit, partial [Dimocarpus longan]
Length = 158
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/158 (76%), Positives = 136/158 (86%)
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKE 231
FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L ++V ++ E
Sbjct: 1 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPWQKVHHIIHE 60
Query: 232 AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISL 291
AVEIE EFVC+ALPCAL+GMN LMSQYI+FVADRLL +LG + Y V NPFDWME ISL
Sbjct: 61 AVEIETEFVCEALPCALIGMNSSLMSQYIKFVADRLLVSLGCQRKYNVENPFDWMEFISL 120
Query: 292 QGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
QGK NFFE+RVG+YQKAS+MSSL G N VFK+DEDF
Sbjct: 121 QGKANFFERRVGDYQKASIMSSLQNGGKNFVFKLDEDF 158
>gi|215275539|sp|P0C8I1.1|RIR2_ASFP4 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D ++ + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EER + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEERIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|393226483|gb|EJD34233.1| ribonucleotide reductase [Auricularia delicata TFB-10046 SS5]
Length = 316
Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/301 (40%), Positives = 191/301 (63%), Gaps = 2/301 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L P R ++PI + ++W +YKKA + FW+ ++D + D++HW+ L +E+HFV+
Sbjct: 14 EPVLLPTHYRLVLYPINFVELWVLYKKAVSFFWSVGDLDFNADVQHWDNKLNMNERHFVS 73
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LA A+S G++ EN+ RF E+Q+AEAR F G Q A++N H E SL+ ++D
Sbjct: 74 HILALIASSKGVIYENIVRRFACELQIAEARCFLGIQAAVQNTHLEAASLMAHILVRDPI 133
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+ +F+A++ PCV ++A W W+D + F R++A A V G+FFSG+F ++FWL++
Sbjct: 134 QHQYVFNALDGAPCVQRRAAWIARWLDNDDLPFRMRVVALAVVGGVFFSGAFASLFWLEE 193
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGL+P + ISRDE LH +FAC L+ LR + V ++ EAVE+E+ + ++L
Sbjct: 194 RGLLPAVAMLVRFISRDERLHSEFACALFDELRLRPCVHVVHRIIGEAVEVEKGLLTESL 253
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P +LVG++ + M QYIE VADRLL LGY LY NPF + + + FF++ G
Sbjct: 254 PVSLVGLDVKEMGQYIEHVADRLLQRLGYAALYHAFNPFAFADFAIAGQRDEFFQRSSGT 313
Query: 305 Y 305
Y
Sbjct: 314 Y 314
>gi|162849427|emb|CAN10392.1| Ribonucleotide reductase small subunit [African swine fever virus
OURT 88/3]
gi|291289488|emb|CBH29145.1| BA71V-F334L [African swine fever virus E75]
gi|303398729|emb|CBW46710.1| F334L [African swine fever virus Georgia 2007/1]
Length = 334
Score = 253 bits (647), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 9 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 68
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 69 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 128
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D T ERL+ FA VEGI F F AI +LK++
Sbjct: 129 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 188
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 189 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 248
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 249 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 308
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 309 LRPTQYQ 315
>gi|215275540|sp|P0C8I2.1|RIR2_ASFWA RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D ++ + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|132618|sp|P26713.1|RIR2_ASFM2 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYNVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|162849254|emb|CAN10143.1| Ribonucleotide reductase small subunit [African swine fever virus
Benin 97/1]
Length = 327
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D T ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|9628152|ref|NP_042738.1| ribonucleotide reductase small subunit [African swine fever virus]
gi|1172939|sp|P42492.1|RIR2_ASFB7 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
gi|780414|gb|AAA65274.1| ribonucleotide reductase small subunit [African swine fever virus]
gi|1097433|prf||2113434AT ribonucleotide reductase:SUBUNIT=small
Length = 334
Score = 253 bits (646), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 9 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 68
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 69 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 128
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D T ERL+ FA VEGI F F AI +LK++
Sbjct: 129 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 188
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 189 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 248
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 249 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 308
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 309 LRPTQYQ 315
>gi|156847976|ref|XP_001646871.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
70294]
gi|156117552|gb|EDO19013.1| hypothetical protein Kpol_2002p84 [Vanderwaltozyma polyspora DSM
70294]
Length = 351
Score = 253 bits (646), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 203/328 (61%), Gaps = 5/328 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW--EALTADEKHF 63
+E +L N RF +FPI+Y +I++ YKK EA FWTAEE+D S+D+++W + +T DEK +
Sbjct: 25 DESILTENKRRFVLFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITKDEKEY 84
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+LA FA++D + ENL E Q EA+ FYGFQI ++NIH E+Y +L+++ +KD
Sbjct: 85 FIRLLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVKD 143
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWL 182
+++ +F I+ + + +K +A +W + + F E+LIA A V GIF ++ ++
Sbjct: 144 DEKRTSMFEEIKDLTNIKEKIEYAKSWFENEDNLFGEKLIAEAAVLGIFSLSAYVSVLSF 203
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
+K GL+PG + + RD GLH DF CL+Y+ L+ ++ E V+ ++ +AVEIE++ +
Sbjct: 204 QKGGLIPGFVTGVDNMLRDRGLHVDFCCLMYAHLKNQIDSEIVQKIIVDAVEIEKKSLLK 263
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP V + + M+Q+IE+VAD +L A G K Y NP+++ME + L G TN K +
Sbjct: 264 ALPIIKVNLKIDEMNQFIEYVADSILVAFGNEKHYNATNPYEFMENVVLPGNTNSLAKTI 323
Query: 303 GEYQKASVMSSLNG-NGGNHVFKIDEDF 329
+ QKAS + + + F +EDF
Sbjct: 324 ADAQKASEFAKTSKPDAETTTFSFNEDF 351
>gi|215275538|sp|P0C8I0.1|RIR2_ASFK5 RecName: Full=Ribonucleoside-diphosphate reductase small chain;
AltName: Full=Ribonucleotide reductase small subunit
Length = 327
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL + RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIRKMAQWVQQWMDPVKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L L +Y V NPF M L KTNFFE
Sbjct: 242 DKARGSVPGFSKEMLFQYIRYFTDNLCFMLQCKSIYKVENPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>gi|365985840|ref|XP_003669752.1| hypothetical protein NDAI_0D01950 [Naumovozyma dairenensis CBS 421]
gi|343768521|emb|CCD24509.1| hypothetical protein NDAI_0D01950 [Naumovozyma dairenensis CBS 421]
Length = 352
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 199/325 (61%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EA+FWTAEE++L +D++ + L D+K F+
Sbjct: 31 DEILLMENSRRFVMFPIKYHEIWAAYKKVEAAFWTAEEIELEKDVKDFSKLNDDQKEFIA 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLA+ S+ I+ ++L +F E+Q E ++ YGFQI +ENI+ E+YS++++ + +
Sbjct: 91 RVLAYLTVSEDIINKHLVEKFSAELQNPEGKSLYGFQIMMENIYDEVYSMIVDA-LYNGP 149
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E F + + +KA + WI ++ + ERL+A + EGIFFSG + A+ WL
Sbjct: 150 ENVPYFKQVPSTVQHQEKAAFIQRWIHNPDSLYGERLVALSAKEGIFFSGVYAALGWLGN 209
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
PG++ +N+ I RD+G + DF CLL++ L+TK + V+ ++ EAV+IE + + A
Sbjct: 210 TAGFPGISTANKFICRDKGAYADFGCLLFAHLKTKPDAKIVEKIITEAVDIELDVMNKAF 269
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
G++ L+ QY++F+AD LL + G K+Y V NPF++M + GK+NFFEK+V +
Sbjct: 270 EVEKFGVDPALIKQYVQFIADSLLSSFGNDKVYNVTNPFEFMAGATQIGKSNFFEKKVSD 329
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
+ K V ++ N K +E F
Sbjct: 330 FTK--VTTADKANKSAESIKFNESF 352
>gi|47213105|emb|CAF89525.1| unnamed protein product [Tetraodon nigroviridis]
Length = 198
Score = 250 bits (639), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 123/193 (63%), Positives = 150/193 (77%), Gaps = 5/193 (2%)
Query: 138 PCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNE 196
P KKA WALNWI + ++ ER++AFA VEGIFFSGSF AIFWLKKRGLMPGLTFSNE
Sbjct: 10 PHRWKKADWALNWIGNQKASYGERVVAFAAVEGIFFSGSFAAIFWLKKRGLMPGLTFSNE 69
Query: 197 LISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELM 256
LISRDEGLHCDFACL++ L K S + V A+++ AVEIE+EF+ +ALP L+GMN +LM
Sbjct: 70 LISRDEGLHCDFACLMFKHLLHKPSAQTVGAIIRNAVEIEQEFLTEALPVKLIGMNCQLM 129
Query: 257 SQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNG 316
+YIEFVADRLL LG+ K+Y NPFD+ME ISL+GKTNFFEKRVGEYQ+ VM+
Sbjct: 130 KRYIEFVADRLLLELGFAKIYRAENPFDFMENISLEGKTNFFEKRVGEYQRMGVMAG--- 186
Query: 317 NGGNHVFKIDEDF 329
++ F++D DF
Sbjct: 187 -AADNTFRLDADF 198
>gi|356519286|ref|XP_003528304.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain-like [Glycine max]
Length = 186
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 128/187 (68%), Positives = 143/187 (76%), Gaps = 12/187 (6%)
Query: 55 ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYS 114
L+ E HF+T VLAFFAAS+ IVLENL G F E+Q+ EARAFYGFQ IENIHSE+YS
Sbjct: 5 TLSDGEHHFITLVLAFFAASNDIVLENLVGHFTKEIQLPEARAFYGFQFGIENIHSEIYS 64
Query: 115 LLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSG 174
LLLET KDS EKNRLF I T+ + KK+ WAL WID S++F ERL+AFAC+EGIFFSG
Sbjct: 65 LLLETXTKDSTEKNRLFRTINTILRITKKSQWALCWIDASKSFMERLVAFACIEGIFFSG 124
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVE 234
S+C IFWL+K LM GLTFSNELIS DEGLHCDFACLLYSLLR KLSEE V
Sbjct: 125 SYCVIFWLEKCELM-GLTFSNELISXDEGLHCDFACLLYSLLRKKLSEECV--------- 174
Query: 235 IEREFVC 241
REFVC
Sbjct: 175 --REFVC 179
>gi|124487872|gb|ABN12019.1| putative ribonucleotide reductase R2 subunit [Maconellicoccus
hirsutus]
Length = 249
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/238 (54%), Positives = 167/238 (70%), Gaps = 2/238 (0%)
Query: 77 IVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIET 136
IV +NL RF EVQV EARAF+GFQI+ IHSEMYS+L+E+ IKD++EKN +F+ IET
Sbjct: 1 IVNDNLVKRFSQEVQVPEARAFFGFQISNAGIHSEMYSVLIESLIKDANEKNLIFNTIET 60
Query: 137 VPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSN 195
VPCV KK W L I D TF +++AFA VEGIFF+G AIFWL+++G+MPGLT SN
Sbjct: 61 VPCVKKKKDWVLRRIADDRVTFPLKVVAFATVEGIFFAGGAAAIFWLQEKGVMPGLTLSN 120
Query: 196 ELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGEL 255
ELI + E L+ DFACLL+ L + S E + +++EAV IE+EF LP +L+GM+ EL
Sbjct: 121 ELIRKGESLYTDFACLLFKRLVQRPSVEEITEIIREAVIIEQEFSTKGLPVSLIGMDCEL 180
Query: 256 MSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSS 313
M+ YIEFVADRLL AL K++GV NPF +ME+ K F+K V +K V S+
Sbjct: 181 MTTYIEFVADRLLQALNCPKVFGVPNPFGFMEMKWANDKMR-FDKVVDLCRKNGVTST 237
>gi|154283275|ref|XP_001542433.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
gi|150410613|gb|EDN06001.1| hypothetical protein HCAG_02604 [Ajellomyces capsulatus NAm1]
Length = 255
Score = 248 bits (632), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+EPLL NP+RF +FP++Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F+
Sbjct: 78 DEPLLQENPNRFVLFPLKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDERYFI 137
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+HVLAFFAASDGIV ENL RF EVQV EAR FYGFQI +ENIHSE YSLL++TYIK+
Sbjct: 138 SHVLAFFAASDGIVNENLVERFSGEVQVPEARCFYGFQIMMENIHSETYSLLIDTYIKEP 197
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
++ LF AIET+PC+ KKA WA+ WI D TFA+RL+AFA VEGIFFSGSF +I
Sbjct: 198 KQRTYLFDAIETIPCIRKKADWAIRWIEDKDSTFAQRLVAFAAVEGIFFSGSFASI 253
>gi|269865524|ref|XP_002651954.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063427|gb|EED42101.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 205
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/200 (62%), Positives = 149/200 (74%), Gaps = 7/200 (3%)
Query: 130 LFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMP 189
LF+AIE +P + KKA WA WI +F R +AFACVEGIFFSGSF AIFWLKKRGLMP
Sbjct: 13 LFNAIENIPSIRKKALWAQKWIASDTSFDTRCVAFACVEGIFFSGSFAAIFWLKKRGLMP 72
Query: 190 GLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALV 249
GLTFSNELISRDEGLH DFACLL+ + K + ++ +V+EAV IE+EF+ ++LP +L+
Sbjct: 73 GLTFSNELISRDEGLHTDFACLLHKYINNKCT--VIEDIVREAVAIEQEFLSESLPVSLI 130
Query: 250 GMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKAS 309
GMN +LM QYIEFVADRLL ALG K+Y V+NPFD+ME ISLQGKTNFFE+R YQK
Sbjct: 131 GMNCKLMCQYIEFVADRLLFALGEKKIYNVSNPFDFMENISLQGKTNFFERREANYQKGY 190
Query: 310 VMSSLNGNGGNHVFKIDEDF 329
V G F ++EDF
Sbjct: 191 V-----GIDNEFKFNLNEDF 205
>gi|444322762|ref|XP_004182022.1| hypothetical protein TBLA_0H02170 [Tetrapisispora blattae CBS 6284]
gi|387515068|emb|CCH62503.1| hypothetical protein TBLA_0H02170 [Tetrapisispora blattae CBS 6284]
Length = 352
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 199/330 (60%), Gaps = 7/330 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE---ALTADEKH 62
+E +L N RF +FPI+Y ++++ YKK EA+FWTAEE+D S+D+ W A+T D+K
Sbjct: 24 DEAILFENKRRFVLFPIKYHEVYDAYKKREANFWTAEEMDSSKDIEQWNSEGAITKDQKE 83
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+T +LA F + D + +NL EVQ+ EA+ FYGFQI ++NIH+E+YSL ++ IK
Sbjct: 84 FITRLLAVFMSQD-FIDQNLTELLSAEVQIPEAKCFYGFQIMVDNIHAEVYSLAIDALIK 142
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D + +F +IE + K + W +AE+L+AFA ++G+F + + F+L
Sbjct: 143 DEKTRVTMFESIEDNSNIKAKMAYNETWFGEDSLYAEKLVAFAALQGLFNLTGYVSAFYL 202
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
+ + ++PG N + +D +H DF L+++ L+ K + + ++ +V EAVE+E++ D
Sbjct: 203 QSKDILPGFNKMNVEMFKDHTMHTDFQALMFAHLKNKPNAKIIERIVTEAVELEKKAYDD 262
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
+G++ + M +IE VAD +L + G K Y +NPF +ME + L G++N FEK+V
Sbjct: 263 LFLVEKIGLSKKDMDLFIEVVADTILESFGNEKHYNASNPFPFMEGVELPGQSNSFEKKV 322
Query: 303 GEYQKASVMSSL---NGNGGNHVFKIDEDF 329
+YQKA M+ N + F +EDF
Sbjct: 323 SDYQKAGDMAKAEKENKAKADDAFAFNEDF 352
>gi|367002223|ref|XP_003685846.1| hypothetical protein TPHA_0E03220 [Tetrapisispora phaffii CBS 4417]
gi|357524145|emb|CCE63412.1| hypothetical protein TPHA_0E03220 [Tetrapisispora phaffii CBS 4417]
Length = 352
Score = 243 bits (621), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 201/333 (60%), Gaps = 7/333 (2%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW--EALTADE 60
S +E +L N RF +FPI+Y ++++ YK+ EA FWTAEE+D ++D+ ++ E ++ DE
Sbjct: 21 SQKDEVILIENHRRFVLFPIKYHEVYDAYKQREALFWTAEELDFTKDIENFNGEEISEDE 80
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K ++T +LA FA++D L NL EVQ+ EA+ FYGFQI ++NIH E+YSL+++
Sbjct: 81 KEYITRLLALFASNDMDKL-NLTENLSAEVQIPEAKCFYGFQIMLDNIHQEVYSLIIDAI 139
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAI 179
IKD+ ++ +F ++ + + K +A W + + F E+LIAFA V+GIF ++ +I
Sbjct: 140 IKDNGKRVSMFDDLKKLSNINDKLEYAKTWFENEDHLFGEKLIAFAAVQGIFSLAAYASI 199
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
F K L PGL + + RD LH DF L+Y+ L+ + V ++ +AV+IE+
Sbjct: 200 FSPKGGKLFPGLQKGVQNMFRDRALHTDFQSLMYAHLKHDVDPVVVNRIITDAVKIEKAS 259
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ D LP G+ M Q IE VAD LL + G K Y VANPF +ME +++ G TN F
Sbjct: 260 LKDTLPIEKFGLKIAEMEQLIEHVADFLLVSFGAEKEYNVANPFPFMEKVAIPGNTNSFA 319
Query: 300 KRVGEYQKASVMSSLNGN---GGNHVFKIDEDF 329
K+V +Y KAS ++ + N G F + EDF
Sbjct: 320 KKVADYHKASDIAQTSTNEKKDGEANFSMTEDF 352
>gi|410078754|ref|XP_003956958.1| hypothetical protein KAFR_0D01760 [Kazachstania africana CBS 2517]
gi|372463543|emb|CCF57823.1| hypothetical protein KAFR_0D01760 [Kazachstania africana CBS 2517]
Length = 346
Score = 240 bits (613), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 184/305 (60%), Gaps = 2/305 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EA+FW AEEVDL++D+ ++ L D+K F
Sbjct: 25 DEILLIENKRRFVMFPIKYHEIWAAYKKLEATFWPAEEVDLTKDVDDFKKLNEDQKDFFA 84
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
LA + ++ +L RF E+Q E ++FYGFQI +N++ E +S++++T+ D
Sbjct: 85 RYLAAATTGEANLVNHLIERFSAELQNPEGKSFYGFQIMAQNVYDEAHSMMIDTFF-DGA 143
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
EK + + T V K + WI+ E+ + ERL+A A E +F +G+ IFW
Sbjct: 144 EKVKYLNEFPTSKEVTAKLNFRKEWIESPESLYGERLVALAAKEALFLAGARAVIFWFIS 203
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
+GL G+T I+RD G + DF CLL++ L+ K + + V+ ++ +A EIE+ ++ D L
Sbjct: 204 QGLFHGVTHGISNITRDRGFYSDFNCLLFAHLKNKPNAKVVEKIIVDATEIEKNYMADLL 263
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
G+ ++QY+EF+AD LL + G K Y ANPF++ME + GKTNFFEK V +
Sbjct: 264 KVEQSGLKSAQVNQYVEFLADSLLASFGNEKHYNAANPFEFMEGKTTIGKTNFFEKTVSD 323
Query: 305 YQKAS 309
Y KA+
Sbjct: 324 YTKAN 328
>gi|20809684|gb|AAH28932.1| Similar to ribonucleotide reductase protein r2 class I, partial
[Homo sapiens]
Length = 172
Score = 239 bits (610), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 117/174 (67%), Positives = 138/174 (79%), Gaps = 4/174 (2%)
Query: 156 TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL 215
T+ ER++AFA VEGIFFSGSF +IFWLKKRGLMPGLTFSNELISRDEGLHCDFACL++
Sbjct: 3 TYGERVVAFAAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKH 62
Query: 216 LRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGK 275
L K SEERV+ ++ AV IE+EF+ +ALP L+GMN LM QYIEFVADRL+ LG+ K
Sbjct: 63 LVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSK 122
Query: 276 LYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
++ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N F +D DF
Sbjct: 123 VFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS----FTLDADF 172
>gi|403217182|emb|CCK71677.1| hypothetical protein KNAG_0H02620 [Kazachstania naganishii CBS
8797]
Length = 346
Score = 237 bits (605), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 122/306 (39%), Positives = 194/306 (63%), Gaps = 4/306 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW--EALTADEKHF 63
+E LL N RF MFPI+Y +IW YKKAEASFWTAEE++LS+D+ + +TA++ F
Sbjct: 23 DEILLIENKRRFVMFPIKYHEIWAAYKKAEASFWTAEEIELSKDVEDIADKKVTAEQLAF 82
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ +A + IV +L RF E+Q E ++FYGFQI +ENI+ E+YS++++ Y +
Sbjct: 83 LKKFMALLTLGEDIVNRHLIERFSAELQNPEGKSFYGFQIMMENIYDEVYSMVIDAYF-N 141
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWL 182
E + + I+ A+K + WI E+ + ERL+AFA EGIF SG+ A+F L
Sbjct: 142 GPENIKCYEEIKNCSHFAQKTDFINRWIKDPESLYGERLVAFAAKEGIFLSGAHAAVFAL 201
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
++GL+ GL +N I RD+G + DF+CLL++ L+ K + ++ ++ EAV+IE++ + +
Sbjct: 202 GEKGLLAGLNKANTNIYRDKGSYTDFSCLLFAHLKKKPEPKVIEKIITEAVDIEKDVLVN 261
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
+ G++ QY+E++AD LL + G K+Y V+NPF++M + GK+ FFEK+V
Sbjct: 262 GMNVKEAGVDEAQTIQYVEYLADSLLLSFGNEKVYNVSNPFEFMADTTSIGKSRFFEKQV 321
Query: 303 GEYQKA 308
++ KA
Sbjct: 322 SDFIKA 327
>gi|47213107|emb|CAF89527.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 233 bits (595), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 110/156 (70%), Positives = 129/156 (82%), Gaps = 1/156 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQY +W+MYKKAEASFWTAEEVDLS+DL+HWE+L DE+ F++
Sbjct: 1 EEPLLKENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFIS 60
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK+
Sbjct: 61 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPS 120
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAER 160
E+ LF+AIET+PCV KKA WALNWI + ++ ER
Sbjct: 121 EREYLFNAIETLPCVKKKADWALNWIGNQKASYGER 156
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 4/55 (7%)
Query: 275 KLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
++Y NPFD+ME ISL+GKTNFFEKRVGEYQ+ VM+ N F++D DF
Sbjct: 319 QIYRAENPFDFMENISLEGKTNFFEKRVGEYQRMGVMAGAADN----TFRLDADF 369
>gi|17567153|ref|NP_508269.1| Protein F19G12.2 [Caenorhabditis elegans]
gi|351001563|emb|CCD69733.1| Protein F19G12.2 [Caenorhabditis elegans]
Length = 668
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 120/211 (56%), Positives = 151/211 (71%), Gaps = 3/211 (1%)
Query: 103 IAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERL 161
IA+ENIHSEMY+ LLE YI+D E+N LF+AI T + KA W L WI D + F+ERL
Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWISDHNAPFSERL 504
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKL 220
AFA VEGIFFS SF AIFWLKKRGL+PGLT SNELIS LH + ++L R K
Sbjct: 505 AAFAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELISM-FLLHPNCFFSTFNLQRRRKP 563
Query: 221 SEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
+E R+ ++ E+V +E++FV ++LP L+GMN +M +Y+EFVAD LL LGY K Y
Sbjct: 564 AESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYNTK 623
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
NPFD+ME IS++GKTNFFEKRV EYQ+ +M
Sbjct: 624 NPFDFMENISIEGKTNFFEKRVSEYQRPEMM 654
>gi|290992332|ref|XP_002678788.1| predicted protein [Naegleria gruberi]
gi|284092402|gb|EFC46044.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 197/327 (60%), Gaps = 15/327 (4%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEAS-FWTAEEVD--LSQDLRHWEALTADEKHF 63
E +L+ NP RF +FPIQYP++WE+YKK AS W+ E+ D + D+ + + F
Sbjct: 15 EEILSENPHRFTLFPIQYPKLWEIYKKRLASSIWSVEQFDQIIRNDISKLSEICNSDHSF 74
Query: 64 VTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
+ +LAF A + NL G F ++Q+ EA+ F+GF++A++NIH EMY L E ++
Sbjct: 75 IKIILAFLVA-NCKQKTNLWGAF-KDIQILEAKHFHGFRLAMKNIHYEMYCNLFEILTEE 132
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
+ E++ L + + KK+ + W++ F+ERLI C+E IF S SF +IFWLK
Sbjct: 133 T-ERSELIEKM--INSTMKKSQYTKKWLNSDNLFSERLIGLVCIEQIFLSASFFSIFWLK 189
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-TKLSEERVKALVKEAVEIEREFVCD 242
KRGLM LT SN+LI RDE H +F LYS L+ +KL + V +LVKEAV+IE+EF+
Sbjct: 190 KRGLMSALTISNDLIFRDEEFHSNFLYSLYSNLKHSKLPQTLVHSLVKEAVDIEKEFIT- 248
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
+LP L+ ++ M QY+E V+D +L + GY KL+ N W++ + L K+ FF K +
Sbjct: 249 SLPTELIELDRNSMYQYVEVVSDNILISFGYEKLFHTENQCSWIQDM-LMNKSGFFWK-I 306
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
G +S+ + N+ K+DEDF
Sbjct: 307 GLESYSSIP---HFPTINNELKLDEDF 330
>gi|68069763|ref|XP_676793.1| ribonucleotide reductase small subunit [Plasmodium berghei strain
ANKA]
gi|56496646|emb|CAI04349.1| ribonucleotide reductase small subunit, putative [Plasmodium
berghei]
Length = 158
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 107/162 (66%), Positives = 126/162 (77%), Gaps = 4/162 (2%)
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKA 227
EGI FSGSFCAIFW KK+ + GLTFSNELISRDEGLH DF CL+YSLL KL EE V+
Sbjct: 1 EGILFSGSFCAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLENKLPEEVVQN 60
Query: 228 LVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
+VKEAVE+ER F+C++LPC L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+
Sbjct: 61 IVKEAVEVERSFICESLPCDLIGMNSRLMSQYIEFVADRLLECLGCSKVFHSKNPFNWMD 120
Query: 288 LISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
LISLQGKTNFFEKRV +YQK+ VM+ VF ++ DF
Sbjct: 121 LISLQGKTNFFEKRVADYQKSGVMAQRK----EQVFSLNTDF 158
>gi|14970916|emb|CAC44510.1| putative ribonucleotide reductase small subunit [Sphaerechinus
granularis]
Length = 141
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/141 (76%), Positives = 121/141 (85%), Gaps = 1/141 (0%)
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+AEAR FYGFQIAIENIHSEMYSLL++ YIKD+
Sbjct: 1 HVLAFFAASDGIVNENLVERFSQEVQIAEARCFYGFQIAIENIHSEMYSLLIDAYIKDAV 60
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+A+ET+PCV KKA WAL+WI S F R++AFA VEGIFFSGSF AIFWLKK
Sbjct: 61 QRDYLFNAVETMPCVTKKAQWALDWISSDSADFGTRIVAFAAVEGIFFSGSFAAIFWLKK 120
Query: 185 RGLMPGLTFSNELISRDEGLH 205
RGLMPGLTFSNELISRDEGLH
Sbjct: 121 RGLMPGLTFSNELISRDEGLH 141
>gi|296082342|emb|CBI21347.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 122/145 (84%), Gaps = 7/145 (4%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MPSIPEEPLLAPNPDRFCMFPIQYP++WEMYKKAEASFWTAEEVDLSQD R WE LT+DE
Sbjct: 1 MPSIPEEPLLAPNPDRFCMFPIQYPEVWEMYKKAEASFWTAEEVDLSQDQRQWENLTSDE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSE--MYSLLLE 118
KHF++H+LAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSE + + L E
Sbjct: 61 KHFISHILAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEILLRNKLSE 120
Query: 119 TYIK----DSDEKNRLFHAIETVPC 139
+K DS + R F + +PC
Sbjct: 121 ERVKAIVADSVDIEREF-VCDALPC 144
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/115 (86%), Positives = 108/115 (93%)
Query: 215 LLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYG 274
LLR KLSEERVKA+V ++V+IEREFVCDALPCALVGMN LMSQYIEFVADRLLGALGYG
Sbjct: 113 LLRNKLSEERVKAIVADSVDIEREFVCDALPCALVGMNSALMSQYIEFVADRLLGALGYG 172
Query: 275 KLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
K+Y V+NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNG+G HVFK+DEDF
Sbjct: 173 KMYNVSNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGDGDTHVFKMDEDF 227
>gi|271967540|ref|YP_003341736.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
gi|270510715|gb|ACZ88993.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
Length = 331
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 175/323 (54%), Gaps = 27/323 (8%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP+ +E Y+ A + WT EEVDL+ DL +T +E+H + ++
Sbjct: 2 LLDPGMD-LTLRPMRYPEFYERYRAAIRNTWTVEEVDLNSDLADLARMTPEERHLINRLV 60
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V EAR + Q+ E +H + Y LL+TY+ D DE+
Sbjct: 61 AFFATGDSIVANNLVLNLYQHVNAPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDHDERV 120
Query: 129 RLFHAIETVPCVAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
+ F A+E +P + KA + WID F LI F AC+EG+FF G+
Sbjct: 121 KAFAAVEHIPSIRNKAEFCFRWIDSLGGLDRLESREDRRAFLLNLICFAACIEGLFFYGA 180
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RV 225
F ++W + RGL+ GL + RDE +H +FA +S++ T +EE +V
Sbjct: 181 FAYVYWFRSRGLLSGLATGTNWVFRDESMHMEFA---FSVVDTVRAEEPDLFDDKLGAQV 237
Query: 226 KALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDW 285
+++EAVE E F D + GMN E M QY+E+VAD+ L L + YG ANPF +
Sbjct: 238 TQMIEEAVEAELAFAADLCGDGMSGMNVEQMRQYLEYVADQRLVRLRFPVRYGTANPFAF 297
Query: 286 MELISLQGKTNFFEKRVGEYQKA 308
MEL +Q NFFE+RV YQ A
Sbjct: 298 MELQDVQELANFFERRVSAYQVA 320
>gi|367007080|ref|XP_003688270.1| hypothetical protein TPHA_0N00550 [Tetrapisispora phaffii CBS 4417]
gi|357526578|emb|CCE65836.1| hypothetical protein TPHA_0N00550 [Tetrapisispora phaffii CBS 4417]
Length = 360
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 119/327 (36%), Positives = 195/327 (59%), Gaps = 7/327 (2%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTAD-EKHFV 64
+E +L N RF +FPI++ +I++ YKK EA FWTAEE+DL QD WE D EKH +
Sbjct: 38 DETILFENKRRFVLFPIRFHEIFDAYKKREALFWTAEEIDLKQDCVDWEDKLGDKEKHSM 97
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
VLA FAAS L+ L EVQ EA+ FYGFQI ++N+H E+YSL++++++ +
Sbjct: 98 KRVLAVFAASVLSELK-LTETLSAEVQTPEAKCFYGFQIMVDNVHEEVYSLVIDSFVTNK 156
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
DE +F IE +K +A W D S F E+L+AFA ++ +F S+ ++F ++
Sbjct: 157 DELEVMFDGIEEDEISQEKIAFAKRWFDVSNALFGEKLVAFAAIQSLFSLNSYASLFSMQ 216
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIE-REFVCD 242
KR L+PGL+ +N + +D + +F L+++ L+ K+++E V+ +V EAV IE R +
Sbjct: 217 KRRLLPGLSKANVTMFKDHSIRTEFQFLMFNHLKNKINKEIVQRIVIEAVNIEKRALRKN 276
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
++ +G++ +LM + IE+VAD +L G K + +NP+D+++ S F+K++
Sbjct: 277 SMSFKQLGLDIKLMEELIEYVADIILEGFGNDKFHKTSNPYDFIDTDSFPNACYSFQKKI 336
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDEDF 329
K ++ N + N F ++DF
Sbjct: 337 AHMNKPTI-DEPNTDISN--FSFNDDF 360
>gi|374986759|ref|YP_004962254.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
BCW-1]
gi|297157411|gb|ADI07123.1| ribonucleoside-diphosphate reductase [Streptomyces bingchenggensis
BCW-1]
Length = 340
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 180/330 (54%), Gaps = 23/330 (6%)
Query: 1 MPSIPE--EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTA 58
M + PE + LL P + + P++YP ++ Y+ A + WT EEVDL D+ L+
Sbjct: 1 MTTAPERHKNLLDPGFE-LTLRPMRYPDFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSP 59
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+
Sbjct: 60 GEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLD 119
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-A 165
TY+ D D++ F A+E +P + +KA + WID ET ER LI F A
Sbjct: 120 TYLPDPDDRAAAFAAVENIPSIREKAEFCFRWIDSVDKIDRLETKDERRRFLLNLICFAA 179
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE--- 222
C+EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R + E
Sbjct: 180 CIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFQVVDTVREEEPELFD 239
Query: 223 ----ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYG 278
++V +++EAVE E +F D L GMN E M QY+E VAD+ L LG+ +YG
Sbjct: 240 DELQQQVTDMLREAVEAELQFARDLCGEGLPGMNTESMRQYLECVADQRLARLGFAPVYG 299
Query: 279 VANPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL ++Q TNFFE+R YQ A
Sbjct: 300 SENPFSFMELQNVQELTNFFERRASAYQVA 329
>gi|182436093|ref|YP_001823812.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326776718|ref|ZP_08235983.1| Ribonucleoside-diphosphate reductase [Streptomyces griseus
XylebKG-1]
gi|178464609|dbj|BAG19129.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326657051|gb|EGE41897.1| Ribonucleoside-diphosphate reductase [Streptomyces griseus
XylebKG-1]
Length = 338
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 179/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M S E+ LL P + + P++YP +E Y+ A + WT EEVDL D+ L+ E
Sbjct: 1 MSSTEEKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGE 59
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNW------IDGSETFAER------LIAF-ACV 167
+ D D++ F A+E +P + +KA + W ID ET A+R LI F AC+
Sbjct: 120 LPDPDDRAAAFDAVEEIPSIREKAQFCFRWMDSVEKIDRLETKADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS------ 221
EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R +
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDA 239
Query: 222 -EERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
+++V ++KEAVE E +F D L GMN E M QY+E VAD+ L LG+ +YG
Sbjct: 240 LQQQVTDMLKEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARLGFPTVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA 327
>gi|254388985|ref|ZP_05004216.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
clavuligerus ATCC 27064]
gi|294814921|ref|ZP_06773564.1| Ribonucleoside-diphosphate reductase beta chain protein
[Streptomyces clavuligerus ATCC 27064]
gi|326443293|ref|ZP_08218027.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
gi|197702703|gb|EDY48515.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
clavuligerus ATCC 27064]
gi|218078699|emb|CAB90708.3| class Ia ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces clavuligerus ATCC 27064]
gi|294327520|gb|EFG09163.1| Ribonucleoside-diphosphate reductase beta chain protein
[Streptomyces clavuligerus ATCC 27064]
Length = 339
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 178/324 (54%), Gaps = 21/324 (6%)
Query: 5 PEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFV 64
P + LL P + + P++YP +E Y+ A + WT EEVDL D+ L+ E+H +
Sbjct: 6 PTKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVPDLAKLSPGEQHLI 64
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY+ D
Sbjct: 65 GRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDP 124
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACVEGIF 171
+++N F A+E +P + +KA + W+D ET A+R LI F AC+EG+F
Sbjct: 125 EDRNAAFAAVENIPSIREKAQFCFRWMDSVEKLDQLETQADRRRFLLNLICFAACIEGLF 184
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ER 224
F G+F ++W + RGL+ GL + RDE +H +FA + +R + E ++
Sbjct: 185 FYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQ 244
Query: 225 VKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFD 284
V ++KEAVE E +F D L GMN E M +Y++ VAD+ L LG+ +YG NPF
Sbjct: 245 VTDMLKEAVEAELQFSRDLCGDGLPGMNTESMREYLQCVADQRLARLGFAPVYGSENPFS 304
Query: 285 WMELISLQGKTNFFEKRVGEYQKA 308
+MEL +Q TNFFE+R YQ A
Sbjct: 305 FMELQGVQELTNFFERRPSAYQVA 328
>gi|302554045|ref|ZP_07306387.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471663|gb|EFL34756.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 341
Score = 214 bits (544), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 178/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
+P + + LL P + + P++YP +E Y+ A + WT EEVDL D+ L+ E
Sbjct: 4 LPVMSTQNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAE 62
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY
Sbjct: 63 QHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 122
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACV 167
+ D +++ F A+E +P + +KA++ W+D ET A+R LI F AC+
Sbjct: 123 LPDPEDRTAAFAAVENIPSIREKASFCFKWMDSVEKLDRLETQADRRRFLLNLICFAACI 182
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R + E
Sbjct: 183 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQ 242
Query: 223 --ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
+ V +++EAVE E +F D L GMN E M QY+E VAD+ L LG+ +YG
Sbjct: 243 LRQEVTDMLREAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSE 302
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 NPFSFMELQGVQELTNFFERRPSAYQVA 330
>gi|440698868|ref|ZP_20881190.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
turgidiscabies Car8]
gi|440278680|gb|ELP66674.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
turgidiscabies Car8]
Length = 341
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/327 (37%), Positives = 177/327 (54%), Gaps = 21/327 (6%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P E+ LL P + + P++YP +E Y+ A + WT EEVDL D+ L+ E+
Sbjct: 5 PEKTEKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSEGER 63
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY+
Sbjct: 64 HMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYL 123
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI------DGSETFAER------LIAF-ACVE 168
D ++ F A+E +P + +KA + WI D ET A+R LI F AC+E
Sbjct: 124 PDPADRAAAFDAVENIPSIREKAEFCFRWINEVEKLDRLETQADRRRFLLNLICFAACIE 183
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE------ 222
G+FF G+F ++W + RGL+ GL + RDE +H FA + +R + E
Sbjct: 184 GLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDQL 243
Query: 223 -ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVAN 281
++V +++EAVE E +F D L GMN E M QY+E VAD+ LG LG+ +YG N
Sbjct: 244 QQQVTDMMREAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLGRLGFAPVYGSEN 303
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQKA 308
PF +MEL +Q TNFFE+R YQ A
Sbjct: 304 PFSFMELQGVQELTNFFERRPSAYQVA 330
>gi|411004498|ref|ZP_11380827.1| ribonucleoside-diphosphate reductase [Streptomyces globisporus
C-1027]
Length = 339
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 177/323 (54%), Gaps = 21/323 (6%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
E+ LL P + + P++YP +E Y+ A + WT EEVDL D+ L+ E+H +
Sbjct: 7 EKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIG 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY+ D D
Sbjct: 66 RLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPD 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFF 172
++ F A+E +P + +KA + W+D ET A+R LI F AC+EG+FF
Sbjct: 126 DRAAAFDAVEEIPSIREKAQFCFKWMDSVEKIERLETKADRRRFLLNLICFAACIEGLFF 185
Query: 173 SGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERV 225
G+F ++W + RGL+ GL + RDE +H +FA + +R + E ++V
Sbjct: 186 YGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQV 245
Query: 226 KALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDW 285
++KEAVE E +F D L GMN E M QY+E VAD+ L LG+ +YG NPF +
Sbjct: 246 TDMLKEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARLGFPTVYGSENPFSF 305
Query: 286 MELISLQGKTNFFEKRVGEYQKA 308
MEL +Q TNFFE+R YQ A
Sbjct: 306 MELQGVQELTNFFERRPSAYQVA 328
>gi|254384639|ref|ZP_04999978.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
Mg1]
gi|194343523|gb|EDX24489.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces sp.
Mg1]
Length = 338
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/328 (37%), Positives = 179/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M S ++ LL P + + P++YP +E Y+ A + WT EEVDL D+ LT E
Sbjct: 1 MSSTDQKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAE 59
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI------DGSETFAER------LIAF-ACV 167
+ D D++ F A+E +P + +KA + WI D ET A+R LI F AC+
Sbjct: 120 LPDPDDRAAAFDAVEEIPSIREKAQFCFKWINEVEKLDRLETQADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R + E
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDA 239
Query: 223 --ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
++V ++KEAV+ E +F D L GMN E M +Y+E VAD+ L LG+ +YG
Sbjct: 240 LQQQVTDMLKEAVDAELQFGRDLCGDGLPGMNTESMREYLECVADQRLVRLGFAPVYGSQ 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA 327
>gi|291454052|ref|ZP_06593442.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
albus J1074]
gi|359149120|ref|ZP_09182184.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. S4]
gi|421744323|ref|ZP_16182311.1| ribonucleotide reductase, beta subunit [Streptomyces sp. SM8]
gi|291357001|gb|EFE83903.1| ribonucleotide-diphosphate reductase subunit small [Streptomyces
albus J1074]
gi|406687275|gb|EKC91308.1| ribonucleotide reductase, beta subunit [Streptomyces sp. SM8]
Length = 350
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 32 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHLIGRLVAFFATGDSIVAN 91
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D ++ F A+E +P +
Sbjct: 92 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRADAFAAVENIPSI 151
Query: 141 AKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E+ A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 152 REKAEFCFRWMDSVDKLDQLESQADRRKFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 211
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E E+V A++KEAVE E +F
Sbjct: 212 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDKLQEQVVAMLKEAVEAELQFA 271
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M +Y+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 272 RDLCGDGLPGMNTESMREYLECVADQRLTRLGFAPVYGSQNPFSFMELQGVQELTNFFER 331
Query: 301 RVGEYQKA 308
RV YQ A
Sbjct: 332 RVSAYQVA 339
>gi|291437353|ref|ZP_06576743.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
ghanaensis ATCC 14672]
gi|291340248|gb|EFE67204.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
ghanaensis ATCC 14672]
Length = 340
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVAFFATGDSIVAN 81
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 141
Query: 141 AKKATWALNWIDGSE------TFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E T A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAEFCFTWMDSVEKLDRLQTQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDERLGQQVTDMLREAVEAELQFA 261
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSQNPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|239990628|ref|ZP_04711292.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces roseosporus NRRL 11379]
gi|291447643|ref|ZP_06587033.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
roseosporus NRRL 15998]
gi|291350590|gb|EFE77494.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
roseosporus NRRL 15998]
Length = 338
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 179/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M + ++ LL P + + P++YP +E Y+ A + WT EEVDL D+ L+ E
Sbjct: 1 MSTTEDKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGE 59
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHMIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACV 167
+ D D++ F A+E +P + +KA + W+D ET A+R LI F AC+
Sbjct: 120 LPDPDDRAAAFDAVEEIPSIREKAQFCFKWMDSVEKIERLETKADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS------ 221
EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R +
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDE 239
Query: 222 -EERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
+++V ++KEAVE E +F D L GMN E M QY+E VAD+ L LG+ +YG
Sbjct: 240 LQQQVTDMLKEAVEAELQFGRDLCGEGLPGMNTESMRQYLECVADQRLARLGFPTVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA 327
>gi|255724184|ref|XP_002547021.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
gi|240134912|gb|EER34466.1| hypothetical protein CTRG_01327 [Candida tropicalis MYA-3404]
Length = 252
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/163 (63%), Positives = 123/163 (75%), Gaps = 2/163 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL N R+ MFPI+Y +IW YKKAEASFWT EEVDLS+DL W L +E++FV
Sbjct: 89 EEPLLQENKRRYVMFPIKYHEIWNFYKKAEASFWTCEEVDLSKDLDDWNNKLNDNERYFV 148
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F EVQ EA++FYGFQI +ENIHSEMYSLL+ETY+KD
Sbjct: 149 SRVLAFFAASDGIVGENLIENFSAEVQSPEAKSFYGFQIMMENIHSEMYSLLIETYVKDP 208
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFAC 166
E + LF+AIE +PC+ KKA WA+ WI D +AERL+AF C
Sbjct: 209 QEADFLFNAIENIPCITKKAEWAIKWIQDKDALYAERLVAFCC 251
>gi|365866748|ref|ZP_09406352.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces sp. W007]
gi|364003827|gb|EHM24963.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces sp. W007]
Length = 338
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSPGEQHMIGRLVAFFATGDSIVSN 79
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFDAVEEIPSI 139
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 REKAQFCFKWMDSVEKIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E++V +++EAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALEQQVTDMLREAVEAELQFG 259
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGEGLPGMNTESMRQYLECVADQRLARLGFPTVYGSENPFSFMELQGVQELTNFFER 319
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 320 RPSAYQVA 327
>gi|302558498|ref|ZP_07310840.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
griseoflavus Tu4000]
gi|302476116|gb|EFL39209.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
griseoflavus Tu4000]
Length = 341
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/328 (36%), Positives = 178/328 (54%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
+P + LL P + + P++YP +E Y+ A + W EEVDL D+ L+ +E
Sbjct: 4 LPVKTTKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPEE 62
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY
Sbjct: 63 QHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 122
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACV 167
+ D D++ F A+E +P + +KA + W+D ET A+R LI F AC+
Sbjct: 123 LPDPDDRAAAFAAVENIPSIREKAEFCFRWMDSVEKLDRLETQADRRRFLLNLICFAACI 182
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R + E
Sbjct: 183 EGLFFYGAFAYVYWFRGRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDEQ 242
Query: 223 --ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
++V A+++EAVE E +F D L GMN E M QY+E VAD+ L LG+ +YG
Sbjct: 243 LGQQVTAMLREAVEAELQFARDLCGDGLPGMNTESMRQYLECVADQRLVRLGFAPVYGSE 302
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 NPFSFMELQGVQELTNFFERRPSAYQVA 330
>gi|441155687|ref|ZP_20966846.1| ribonucleoside-diphosphate reductase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440617882|gb|ELQ80969.1| ribonucleoside-diphosphate reductase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 354
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 36 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 95
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 96 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 155
Query: 141 AKKATWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET F LI F AC+EG+FF G+F ++W + RGL
Sbjct: 156 REKAEFCFKWMDSVETIDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 215
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E +V ++KEAVE E +F
Sbjct: 216 LHGLATGTNWVFRDETMHMNFAFSVVDTVREEEPDLFDEELERQVTDMLKEAVEAELQFG 275
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M +Y++ VAD+ L LG+ +YG NPF +MEL ++Q TNFFE+
Sbjct: 276 RDLCGDGLPGMNTESMREYLQCVADQRLQRLGFAPVYGSENPFSFMELQNVQELTNFFER 335
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 336 RASAYQVA 343
>gi|29829569|ref|NP_824203.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
avermitilis MA-4680]
gi|29606677|dbj|BAC70738.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces avermitilis MA-4680]
Length = 338
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT E+H + ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHLIGRLVAFFATGDSIVAN 79
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAVENIPSI 139
Query: 141 AKKATWALNWI------DGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + WI D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 REKAEFCFKWINEVEKLDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDDELQQQVTDMLREAVEAELQFG 259
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGDGLPGMNTESMRQYLECVADQRLQRLGFAPVYGSENPFSFMELQGVQELTNFFER 319
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 320 RASAYQVA 327
>gi|358457765|ref|ZP_09167981.1| Ribonucleoside-diphosphate reductase [Frankia sp. CN3]
gi|357079045|gb|EHI88488.1| Ribonucleoside-diphosphate reductase [Frankia sp. CN3]
Length = 331
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P+ YP ++ Y+ A + WT EEVDL DL L+ E+H V ++AFFA D IV
Sbjct: 13 PMSYPAFYDRYRAAIRNTWTVEEVDLHSDLADLHRLSPAERHLVNRLVAFFATGDTIVAN 72
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D+DE+ + F A+E VP +
Sbjct: 73 NLVLNLYRHINAPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDADERAQAFAAVENVPSI 132
Query: 141 AKKATWALNWID---GSETFAER---------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
KA + WID G + + R LI F AC+EG+FF G+F +++L+ RGL
Sbjct: 133 RAKAQFCFRWIDTLGGLDQLSTRADRRAFLLNLICFAACIEGLFFYGAFAYVYFLRSRGL 192
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E V+ ++ EAV+ E EF
Sbjct: 193 LHGLASGTNWVFRDESMHMEFALDVVRTIRAQEPDLVDGEFEASVRQMLAEAVDAETEFA 252
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L + GM M Y+E VADR L LG+ ++G ANPF ++EL +Q +NFFE+
Sbjct: 253 RDLLAGGVAGMTVVDMRAYLEHVADRRLVQLGFAPMFGSANPFSFLELQDVQELSNFFER 312
Query: 301 RVGEYQKA 308
RV YQ A
Sbjct: 313 RVSAYQVA 320
>gi|408680594|ref|YP_006880421.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Streptomyces venezuelae ATCC 10712]
gi|328884923|emb|CCA58162.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Streptomyces venezuelae ATCC 10712]
Length = 338
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 188/349 (53%), Gaps = 31/349 (8%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M + E+ LL P + + P++YP +E Y+ A + WT EEVDL D+ LT E
Sbjct: 1 MSTNDEKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPGE 59
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHMIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNW------IDGSETFAER------LIAF-ACV 167
+ D +++ F A+E +P + +KA + W ID ET A+R LI F AC+
Sbjct: 120 LPDPEDRAAAFAAVENIPSIREKAQFCFRWMDSVEKIDRLETQADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE----- 222
EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R + E
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDA 239
Query: 223 --ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
++V ++KEAVE E +F D L GMN E M +Y++ VAD+ L LG+ +YG
Sbjct: 240 LRQQVTDMLKEAVEAELQFGRDLCGDGLPGMNTESMREYLQCVADQRLQRLGFAPVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
NPF +MEL +Q TNFFE+R YQ A V S++ +DEDF
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA-VEGSVD---------LDEDF 338
>gi|386383363|ref|ZP_10068865.1| Ribonucleoside-diphosphate reductase [Streptomyces tsukubaensis
NRRL18488]
gi|385669178|gb|EIF92419.1| Ribonucleoside-diphosphate reductase [Streptomyces tsukubaensis
NRRL18488]
Length = 342
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/333 (37%), Positives = 181/333 (54%), Gaps = 27/333 (8%)
Query: 1 MPSIPEEP-----LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA 55
MP+ PE P LL P + + P++YP +E Y+ A + WT EEVDL D+
Sbjct: 1 MPT-PETPARVQNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAK 58
Query: 56 LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSL 115
LT E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y
Sbjct: 59 LTPGEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLT 118
Query: 116 LLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE------TFAER------LIA 163
LL+TY+ D +++ F A+E +P + +KA + W+D E T A+R LI
Sbjct: 119 LLDTYLPDPEDRTAAFAAVENIPSIREKAQFCFRWMDQVEKLDQLDTQADRRRFLLNLIC 178
Query: 164 F-ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE 222
F AC+EG+FF G+F ++W + RGL+ GL + RDE +H +FA + +R + E
Sbjct: 179 FAACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPE 238
Query: 223 -------ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGK 275
++V ++KEAVE E +F D L GMN E M +Y++ VAD+ L LG+
Sbjct: 239 LFDDELRQQVTDMLKEAVEAELQFGRDLCGDGLPGMNTESMREYLQCVADQRLVRLGFAP 298
Query: 276 LYGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
+YG NPF +MEL +Q TNFFE+R YQ A
Sbjct: 299 VYGSENPFSFMELQGVQELTNFFERRPSAYQVA 331
>gi|386357723|ref|YP_006055969.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365808231|gb|AEW96447.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 340
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRNAIKNNWTVEEVDLHSDVADLAKLSPGEQHLIGRLVAFFATGDSIVAN 81
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 141
Query: 141 AKKATWALNWIDGSE------TFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E T AER LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAQFCFRWMDSVEEIDRLRTKAERRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H DFA + +R + + ++V A+++EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDESMHMDFAFQVVDTVRAEEPDLFDEEMGKQVTAMLEEAVEAELQFA 261
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M Y+E VAD+ L LG YG NPF +MEL ++Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTESMRAYLECVADQRLVRLGLPVRYGSQNPFSFMELQNVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RASAYQVA 329
>gi|357401660|ref|YP_004913585.1| ribonucleoside-diphosphate reductase small subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337768069|emb|CCB76782.1| putative ribonucleoside-diphosphate reductase small subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 342
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 24 PMRYPDFYERYRNAIKNNWTVEEVDLHSDVADLAKLSPGEQHLIGRLVAFFATGDSIVAN 83
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 84 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 143
Query: 141 AKKATWALNWIDGSE------TFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E T AER LI F AC+EG+FF G+F ++W + RGL
Sbjct: 144 REKAQFCFRWMDSVEEIDRLRTKAERRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 203
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H DFA + +R + + ++V A+++EAVE E +F
Sbjct: 204 LHGLATGTNWVFRDESMHMDFAFQVVDTVRAEEPDLFDEEMGKQVTAMLEEAVEAELQFA 263
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M Y+E VAD+ L LG YG NPF +MEL ++Q TNFFE+
Sbjct: 264 RDLCGDGLPGMNTESMRAYLECVADQRLVRLGLPVRYGSQNPFSFMELQNVQELTNFFER 323
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 324 RASAYQVA 331
>gi|383777025|ref|YP_005461591.1| putative ribonucleoside-diphosphate reductase small subunit
[Actinoplanes missouriensis 431]
gi|381370257|dbj|BAL87075.1| putative ribonucleoside-diphosphate reductase small subunit
[Actinoplanes missouriensis 431]
Length = 331
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 175/318 (55%), Gaps = 21/318 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP ++ +K A + WT EEVDL DL LT E+H V+ ++
Sbjct: 2 LLDPGMD-LTLRPMKYPHFFDRFKDAIKNTWTVEEVDLHSDLADLAKLTPAEQHLVSRLV 60
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V E R + Q+ E +H + Y LL+TY+ D DE+
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDPDERA 120
Query: 129 RLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGS 175
F A++ +P +A+KA + WID T A+R +I F AC+EG+FF G+
Sbjct: 121 AAFAAVDNIPSIARKAEFCFKWIDSVFELRELRTKADRRAFLLNVICFAACIEGLFFYGA 180
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKAL 228
F +++L+ RGL+ GL + RDE +H FA + +R + E++V+ +
Sbjct: 181 FAYVYFLRSRGLLQGLASGTNWVFRDESMHMAFAFDVVDQVRAEEPDLFDAEMEQQVRDM 240
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
+ EAVE E +F D L + GM+ M +Y++ VADR L ALG +YG NPF +MEL
Sbjct: 241 LAEAVECEVQFAADLLEQGVSGMSLGDMREYLQHVADRRLAALGIAPIYGSTNPFAFMEL 300
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 301 QDVQELSNFFERRVSAYQ 318
>gi|302542646|ref|ZP_07294988.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
hygroscopicus ATCC 53653]
gi|302460264|gb|EFL23357.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
himastatinicus ATCC 53653]
Length = 343
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 167/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YPQ ++ Y+ A + WT EEVDL D+ L+ E+H ++ ++AFFA D IV
Sbjct: 25 PMRYPQFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMISRLVAFFATGDSIVSN 84
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAASFAAVENIPSI 144
Query: 141 AKKATWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E F LI F AC+EG+FF G+F ++W + RGL
Sbjct: 145 REKAEFCFRWMDSVEKIDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 204
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E +V ++KEAVE E +F
Sbjct: 205 LHGLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDDLERQVTDMLKEAVEAELQFA 264
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M Y+E VAD+ L LG+ ++G NPF +MEL +Q TNFFE+
Sbjct: 265 HDLCGDGLPGMNTESMRAYLECVADQRLARLGFPAVFGSENPFSFMELQDVQELTNFFER 324
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 325 RASAYQVA 332
>gi|302536805|ref|ZP_07289147.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
C]
gi|302445700|gb|EFL17516.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces sp.
C]
Length = 356
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT E+H + ++AFFA D IV
Sbjct: 38 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHMIGRLVAFFATGDSIVSN 97
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 98 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFDAVEEIPSI 157
Query: 141 AKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 158 REKAQFCFKWMDSVEKIERLETAADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 217
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E ++V ++KEAVE E +F
Sbjct: 218 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLKEAVEAELQFG 277
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M +Y+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 278 RDLCGDGLPGMNTDSMREYLECVADQRLVRLGFPPVYGSQNPFSFMELQGVQELTNFFER 337
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 338 RPSAYQVA 345
>gi|452819014|gb|EME26126.1| ribonucleotide reductase small subunit [Galdieria sulphuraria]
Length = 313
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 181/304 (59%), Gaps = 7/304 (2%)
Query: 16 RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASD 75
R+ +FPI + YK+ EAS WT+ E+D S+DL +E L + ++ + +VLAFFA+ D
Sbjct: 5 RYSLFPIVDELSYSFYKRQEASIWTSAEMDFSRDLEDFEKLDVEVRNILMNVLAFFASGD 64
Query: 76 GIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIE 135
GIV +N++ RFM E AFY Q+ IE +H+E YSL++ + I+D++E+N+LF A E
Sbjct: 65 GIVSKNISYRFMRSAPNFEQVAFYAAQLFIETVHAETYSLIISSLIRDTEERNKLFSAGE 124
Query: 136 TVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
V K W +I D + ER++AFAC EGIFF+G+F IFW+ + M L F+
Sbjct: 125 NNLAVRSKEKWMERFIEDDTVEEWERILAFACSEGIFFTGAFAVIFWIGEMRSMQNLIFA 184
Query: 195 NELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALV--GMN 252
N IS+DE LHC+FA + LL+ +E+R +++EA E+E+EF+ +P + GM+
Sbjct: 185 NIQISKDEALHCEFA--VARLLQMDWNEDRALEIIREAAELEKEFMKAIIPDKELCYGMS 242
Query: 253 GELMSQYIEFVADRLLGALGYGKLYG--VANPFDWMELISLQGKTNFFEKRVGEYQKASV 310
M YIE++A+RL L Y PF +++ K NFFE R Y++ +V
Sbjct: 243 QSKMLSYIEWMANRLCNMLEIPVAYSEVTKTPFSFVDKAVALEKINFFEVRAANYKRFNV 302
Query: 311 MSSL 314
+L
Sbjct: 303 DEAL 306
>gi|297192180|ref|ZP_06909578.1| ribonucleoside-diphosphate reductase subunit beta protein
[Streptomyces pristinaespiralis ATCC 25486]
gi|197720175|gb|EDY64083.1| ribonucleoside-diphosphate reductase subunit beta protein
[Streptomyces pristinaespiralis ATCC 25486]
Length = 340
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 171/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 81
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAVENIPSI 141
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA++ W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKASFCFKWMDSVESIDRLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E ++V ++KEAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDELRQQVTDMLKEAVEAELQFG 261
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M +Y++ VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVYGSQNPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|383650825|ref|ZP_09961231.1| Ribonucleoside-diphosphate reductase [Streptomyces chartreusis NRRL
12338]
Length = 335
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 17 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVAFFATGDSIVAN 76
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 77 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 136
Query: 141 AKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 137 REKAGFCFKWMDSVEQLDRLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 196
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 197 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLRQQVTDMLREAVEAELQFA 256
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 257 RDLCGDGLPGMNTESMRQYLECVADQRLSRLGFAPVYGSENPFSFMELQGVQELTNFFER 316
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 317 RPSAYQVA 324
>gi|294631326|ref|ZP_06709886.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. e14]
gi|292834659|gb|EFF93008.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. e14]
Length = 339
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + W EEVDL D+ LT E+H + ++AFFA D IV
Sbjct: 21 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPGEQHLIGRLVAFFATGDSIVAN 80
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 81 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 140
Query: 141 AKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 141 REKAEFCFTWMDSVEKLDRLETRADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E++V +++EAVE E +F
Sbjct: 201 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLEQQVTDMLREAVEAELQFA 260
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 261 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 320
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 321 RPSAYQVA 328
>gi|295836584|ref|ZP_06823517.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB74]
gi|197697282|gb|EDY44215.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB74]
Length = 345
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 175/332 (52%), Gaps = 26/332 (7%)
Query: 2 PSIPEEP-----LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEAL 56
P++PE+ LL P + + P++YP +E Y+ A + WT EEVDL D+ L
Sbjct: 4 PTLPEQKKRHQNLLDPGFE-LTLRPMRYPDFYERYRNAIKNTWTVEEVDLHSDVADLAKL 62
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
T E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET------------FAERLIAF 164
L+TY+ D D++ F A+E +P + +KA + WID E F LI F
Sbjct: 123 LDTYLPDPDDRADAFAAVENIPSIREKAEFCFKWIDEVEKIDRLESKADRRRFLLNLICF 182
Query: 165 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-- 221
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R +
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 222 -----EERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKL 276
E+ VK ++ AV E +F D L GMN E M +Y++ VAD+ L LG+ +
Sbjct: 243 FDAELEQEVKDMLDGAVNAELQFARDLCGDGLPGMNTESMREYLQCVADQRLQRLGFAPV 302
Query: 277 YGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
YG +NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 YGSSNPFSFMELQGVQELTNFFERRPSAYQVA 334
>gi|318060206|ref|ZP_07978929.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actG]
gi|318077113|ref|ZP_07984445.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SA3_actF]
gi|333024515|ref|ZP_08452579.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces sp. Tu6071]
gi|332744367|gb|EGJ74808.1| putative ribonucleoside-diphosphate reductase beta chain
[Streptomyces sp. Tu6071]
Length = 345
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 179/332 (53%), Gaps = 26/332 (7%)
Query: 2 PSIPEEP-----LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEAL 56
P++PE+ LL P + + P++YP +E Y+ A + WT EEVDL D+ L
Sbjct: 4 PTLPEQKKRNQNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKL 62
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
T E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET------------FAERLIAF 164
L+TY+ D D++ F A+E +P + KA + WID E F LI F
Sbjct: 123 LDTYLPDPDDRAAAFAAVENIPSIRAKAEFCFKWIDEVEKIDRLESRSDRRRFLLNLICF 182
Query: 165 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRT---KL 220
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R +L
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 221 SEERVKALVKE----AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKL 276
+++++A VKE AV+ E +F D L GMN E M +Y++ VAD+ L LG+ +
Sbjct: 243 FDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMNTESMREYLQCVADQRLVRLGFSPV 302
Query: 277 YGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
YG +NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 YGSSNPFSFMELQGVQELTNFFERRPSAYQVA 334
>gi|302521843|ref|ZP_07274185.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB78]
gi|302430738|gb|EFL02554.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sp. SPB78]
Length = 345
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/332 (36%), Positives = 179/332 (53%), Gaps = 26/332 (7%)
Query: 2 PSIPEEP-----LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEAL 56
P++PE+ LL P + + P++YP +E Y+ A + WT EEVDL D+ L
Sbjct: 4 PTLPEQKKRNQNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKL 62
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
T E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y L
Sbjct: 63 TPGEQHLIGRLVAFFATGDSIVSNNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTL 122
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET------------FAERLIAF 164
L+TY+ D D++ F A+E +P + KA + WID E F LI F
Sbjct: 123 LDTYLPDPDDRAAAFAAVENIPSIRAKAEFCFKWIDEVEKIDRLESQSDRRRFLLNLICF 182
Query: 165 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRT---KL 220
AC+EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R +L
Sbjct: 183 AACIEGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPEL 242
Query: 221 SEERVKALVKE----AVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKL 276
+++++A VKE AV+ E +F D L GMN E M +Y++ VAD+ L LG+ +
Sbjct: 243 FDDKLEAEVKEMLAGAVDAELQFARDLCGDGLPGMNTESMREYLQCVADQRLVRLGFSPV 302
Query: 277 YGVANPFDWMELISLQGKTNFFEKRVGEYQKA 308
YG +NPF +MEL +Q TNFFE+R YQ A
Sbjct: 303 YGSSNPFSFMELQGVQELTNFFERRPSAYQVA 334
>gi|455647607|gb|EMF26549.1| ribonucleoside-diphosphate reductase [Streptomyces gancidicus BKS
13-15]
Length = 338
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 165/308 (53%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + W EEVDL D+ LT +E+H + ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPEEQHLIGRLVAFFATGDSIVAN 79
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 139
Query: 141 AKKATWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET F LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 REKAEFCFRWMDSVETIDRLESRSDRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E +V +++EAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDEELGRQVTDMLREAVEAELQFA 259
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGDGLPGMNTASMRQYLECVADQRLVRLGFAPVYGSENPFSFMELQGVQELTNFFER 319
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 320 RPSAYQVA 327
>gi|443624323|ref|ZP_21108797.1| putative Ribonucleoside-diphosphate reductase, beta subunit
[Streptomyces viridochromogenes Tue57]
gi|443342237|gb|ELS56405.1| putative Ribonucleoside-diphosphate reductase, beta subunit
[Streptomyces viridochromogenes Tue57]
Length = 337
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT E+H + ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 138
Query: 141 AKKATWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAEFCFKWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLQQQVTDMLREAVEAELQFA 258
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 259 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|345001978|ref|YP_004804832.1| ribonucleoside-diphosphate reductase [Streptomyces sp. SirexAA-E]
gi|344317604|gb|AEN12292.1| Ribonucleoside-diphosphate reductase [Streptomyces sp. SirexAA-E]
Length = 340
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVSN 81
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFDAVEEIPSI 141
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAQFCFKWMDSVEEIDRLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E ++V +++EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLREAVEAELQFG 261
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ LYG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGEGLPGMNTESMRQYLECVADQRLTRLGFPALYGSENPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|408529356|emb|CCK27530.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
davawensis JCM 4913]
Length = 337
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT E+H + ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPAEQHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFDAVENIPSI 138
Query: 141 AKKATWALNWI------DGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + WI D E+ A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAGFCFKWINEVEKLDRLESQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V +++EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLREAVEAELQFA 258
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 259 RDLCGDGLPGMNTDSMRQYLECVADQRLSRLGFAPVYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|162452149|ref|YP_001614516.1| ribonucleotide-diphosphate reductase [Sorangium cellulosum So ce56]
gi|161162731|emb|CAN94036.1| Ribonucleotide-diphosphate reductase [Sorangium cellulosum So ce56]
Length = 339
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 166/306 (54%), Gaps = 20/306 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P+ YP +EMY+ A + WT EEVD S D+ +T E+H V ++AFFA D IV
Sbjct: 21 PMAYPAFFEMYRSAIKNTWTVEEVDFSTDVGDLRKMTDAERHLVQRLVAFFATGDSIVAN 80
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TYI D ++++R F A+E +P +
Sbjct: 81 NLVLNLYRHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPEDRHRAFAAVENIPSI 140
Query: 141 AKKATWALNWIDGSE------TFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + + W+D E T AER LI F ACVEG+FF G+F +++L+ RGL
Sbjct: 141 RQKADFCMRWLDSVESLGRLDTRAERRRFLLNLICFAACVEGLFFFGAFAYVYFLRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE H FA + S R + E + ++ EA+ E F
Sbjct: 201 LHGLAAGTSWVFRDESAHMRFAFEVVSTARREEPELFDAGLARSILDMMDEAIACEARFA 260
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L + GM+ + +Y+EF AD+ L LG K YG NPF +M+L +Q TNFFE+
Sbjct: 261 EDLLGAGVAGMSARDVRRYLEFCADQRLATLGMPKRYGAKNPFSFMDLQDVQEVTNFFER 320
Query: 301 RVGEYQ 306
RV YQ
Sbjct: 321 RVSAYQ 326
>gi|357411278|ref|YP_004923014.1| ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
ATCC 33331]
gi|320008647|gb|ADW03497.1| Ribonucleoside-diphosphate reductase [Streptomyces flavogriseus
ATCC 33331]
Length = 338
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVSN 79
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFDAVEEIPSI 139
Query: 141 AKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 REKAQFCFRWMDSVEKIERLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + + ++V ++KEAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPDLFDDELRQQVTDMLKEAVEAELQFG 259
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ LYG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFPALYGSENPFSFMELQGVQELTNFFER 319
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 320 RPSAYQVA 327
>gi|256391238|ref|YP_003112802.1| ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
44928]
gi|256357464|gb|ACU70961.1| Ribonucleoside-diphosphate reductase [Catenulispora acidiphila DSM
44928]
Length = 331
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 171/320 (53%), Gaps = 21/320 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP ++ Y+ A + WT EEVDL DL + L+A E+H V+ ++
Sbjct: 2 LLDPGLD-LTLRPMRYPHFFDRYRDAIKNTWTVEEVDLHSDLTDLDRLSAAERHLVSRLV 60
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V E R + Q+ E +H + Y LL+TY+ D DE+
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEDERT 120
Query: 129 RLFHAIETVPCVAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F A+E +P + +KA + WID F LI F AC+EG+FF G+
Sbjct: 121 EAFAAVENIPSIRRKAEFCFRWIDSLGNLQRLESREDRRAFLLNLICFAACIEGLFFYGA 180
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKAL 228
F +++L+ RGL+ GL + RDE +H FA + +R + + ++V+ +
Sbjct: 181 FAYVYFLRSRGLLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDEKMAQQVREM 240
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
+ EAVE E +F D L + G+ M Y+E VADR L LG +YG ANP +MEL
Sbjct: 241 LAEAVECETQFAGDLLGGGVSGLPVADMRAYLEHVADRRLEQLGLEPMYGTANPLGFMEL 300
Query: 289 ISLQGKTNFFEKRVGEYQKA 308
+Q +NFFE+RV YQ A
Sbjct: 301 QDVQELSNFFERRVSAYQVA 320
>gi|398782657|ref|ZP_10546371.1| ribonucleoside-diphosphate reductase [Streptomyces auratus AGR0001]
gi|396996721|gb|EJJ07707.1| ribonucleoside-diphosphate reductase [Streptomyces auratus AGR0001]
Length = 381
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 171/308 (55%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP+ ++ Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 63 PMRYPEFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 122
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 123 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 182
Query: 141 AKKATWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E+ A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 183 REKAEFCFKWMDSVESIDRLESRADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 242
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E++V +++EAVE E +F
Sbjct: 243 LHGLATGTNWVFRDESMHMEFAFSVVDTVRQEEPDLFDDKLEQQVTEMLREAVEAELQFG 302
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN M +Y++ VAD+ L LG+ +YG NPF +MEL ++Q TNFFE+
Sbjct: 303 RDLCGDGLPGMNTASMREYLQCVADQRLQRLGFAPVYGSQNPFSFMELQNVQELTNFFER 362
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 363 RASAYQVA 370
>gi|418471848|ref|ZP_13041638.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicoflavus ZG0656]
gi|371547525|gb|EHN75895.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicoflavus ZG0656]
Length = 343
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + W EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 144
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 145 REKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 204
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E E+V +++EAVE E +F
Sbjct: 205 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLREQVTDMLREAVEAELQFA 264
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 265 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 324
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 325 RPSAYQVA 332
>gi|386842422|ref|YP_006247480.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374102723|gb|AEY91607.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451795715|gb|AGF65764.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 337
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT +E+H + ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEQHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 138
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID +T A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAEFCFKWINEVEKIDRLDTKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + +++V ++ EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLQQQVTDMLHEAVEAELQFA 258
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M QY++ VAD+ L LG+ YG NPF +MEL +Q TNFFE+
Sbjct: 259 HDLCGDGLPGMNTDSMRQYLQCVADQRLTRLGFAPRYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|456388970|gb|EMF54410.1| nrdM protein [Streptomyces bottropensis ATCC 25435]
Length = 337
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSEGEQHMIGRLVAFFATGDSIVAN 78
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D ++ F A+E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRVAAFAAVENIPSI 138
Query: 141 AKKATWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAEFCFKWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTK-------LSEERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + L +++V ++KEAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPDLFDDLLQQQVTDMLKEAVEAELQFG 258
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 259 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|355717371|gb|AES05911.1| ribonucleotide reductase M2 B [Mustela putorius furo]
Length = 150
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 117/142 (82%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ++EK+F++
Sbjct: 9 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 68
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 69 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 128
Query: 126 EKNRLFHAIETVPCVAKKATWA 147
++ LF+AIET+P V KKA WA
Sbjct: 129 KREFLFNAIETMPYVKKKADWA 150
>gi|290957506|ref|YP_003488688.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
scabiei 87.22]
gi|260647032|emb|CBG70131.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
scabiei 87.22]
Length = 355
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 167/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 37 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSEGEQHMIGRLVAFFATGDSIVAN 96
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D ++ F A+E +P +
Sbjct: 97 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPADRVAAFAAVENIPSI 156
Query: 141 AKKATWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 157 REKAEFCFKWMDSVEKLDRLESQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 216
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRT-------KLSEERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R +L ++V ++KEAVE E +F
Sbjct: 217 LHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPELFDELLRQQVTDMLKEAVEAELQFG 276
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 277 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSQNPFSFMELQGVQELTNFFER 336
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 337 RPSAYQVA 344
>gi|429196106|ref|ZP_19188092.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
ipomoeae 91-03]
gi|428668184|gb|EKX67221.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
ipomoeae 91-03]
Length = 340
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPAEQHLIGRLVAFFATGDSIVAN 81
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 141
Query: 141 AKKATWALNWIDGSETF------AER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAQFCFTWMDSVEKLDRLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + +++V +++EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDRLQQQVTDMLREAVEAELQFA 261
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|297202281|ref|ZP_06919678.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sviceus ATCC 29083]
gi|197710199|gb|EDY54233.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
sviceus ATCC 29083]
Length = 340
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 167/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 22 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLAKLSPAEQHLIGRLVAFFATGDSIVAN 81
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D ++ F A+E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPQDRAAAFDAVENIPSI 141
Query: 141 AKKATWALNWI------DGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + WI D E+ A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 REKAEFCFRWINEVEKLDRLESQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E ++V ++ EAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDRLQQQVTDMLAEAVEAELQFA 261
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTESMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RPSAYQVA 329
>gi|289769189|ref|ZP_06528567.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
lividans TK24]
gi|289699388|gb|EFD66817.1| ribonucleoside-diphosphate reductase, beta subunit [Streptomyces
lividans TK24]
Length = 343
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + W EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 144
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 145 REKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 204
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E E+V +++EAVE E +F
Sbjct: 205 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFA 264
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 265 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 324
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 325 RPSAYQVA 332
>gi|21223593|ref|NP_629372.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicolor A3(2)]
gi|7328345|emb|CAB82486.1| class I ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces coelicolor A3(2)]
gi|8546891|emb|CAB94610.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
coelicolor A3(2)]
Length = 343
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + W EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 144
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 145 REKAEFCFRWMDSVESIDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 204
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + E E+V +++EAVE E +F
Sbjct: 205 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPELFDDQLREQVTDMLREAVEAELQFA 264
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 265 RDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 324
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 325 RPSAYQVA 332
>gi|329939692|ref|ZP_08288993.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
griseoaurantiacus M045]
gi|329301262|gb|EGG45157.1| ribonucleotide-diphosphate reductase small chain [Streptomyces
griseoaurantiacus M045]
Length = 347
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 176/329 (53%), Gaps = 30/329 (9%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + W EEVDL D+ LT E+H + ++AFFA D IV
Sbjct: 29 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLTPAERHLIGRLVAFFATGDSIVAN 88
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 89 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 148
Query: 141 AKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET ++R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 149 REKAEFCFRWMDSVERLDRLETRSDRRRFLLNLICFAACIEGLFFYGAFAYVYWFRGRGL 208
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTK----LSEE---RVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + EE +V +++EAVE E +F
Sbjct: 209 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPGLFDEELGRQVTDMLREAVEAELQFA 268
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M QY++ VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 269 RDLCGDGLPGMNTESMRQYLQCVADQRLVRLGFAPVYGSENPFSFMELQGVQELTNFFER 328
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
R YQ A + G+ G DEDF
Sbjct: 329 RASAYQVA-----VEGSVG-----FDEDF 347
>gi|345848582|ref|ZP_08801602.1| Ribonucleoside-diphosphate reductase [Streptomyces zinciresistens
K42]
gi|345639927|gb|EGX61414.1| Ribonucleoside-diphosphate reductase [Streptomyces zinciresistens
K42]
Length = 337
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 168/309 (54%), Gaps = 22/309 (7%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT +E H + ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEHHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D ++ F A+E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPRDRAAAFDAVENIPSI 138
Query: 141 AKKATWALNWI------DGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + WI D E+ ++R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAGFCFKWINEVEKLDRLESRSDRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRT--------KLSEERVKALVKEAVEIEREF 239
+ GL + RDE +H FA + +R +L EE V +++EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDRLREE-VTDMLREAVEAELQF 257
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
D L GMN + M QY+E VAD+ L LG+ +YG NPF +MEL +Q TNFFE
Sbjct: 258 ARDLCGDGLPGMNTDSMRQYLECVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFE 317
Query: 300 KRVGEYQKA 308
+R YQ A
Sbjct: 318 RRPSAYQVA 326
>gi|330467634|ref|YP_004405377.1| ribonucleoside-diphosphate reductase [Verrucosispora maris
AB-18-032]
gi|328810605|gb|AEB44777.1| Ribonucleoside-diphosphate reductase [Verrucosispora maris
AB-18-032]
Length = 342
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 174/318 (54%), Gaps = 21/318 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YPQ ++ +K A + WT EEVDL DL L+ E+H V+ ++
Sbjct: 13 LLDPGMD-LTLRPMRYPQFFDRFKDAIRNTWTVEEVDLHADLADLAKLSPAEQHLVSRLV 71
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL + E R + Q+ E +H + Y LL+TY+ D ++
Sbjct: 72 AFFATGDTIVANNLVLNLYQHINSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKQRY 131
Query: 129 RLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGS 175
F A+E +P +A+KA + WID +T A+R LI F AC+EG+FF G+
Sbjct: 132 EAFAAVENIPSIARKAEFCFKWIDSIFELRELKTRADRRAFLLNLICFAACIEGLFFYGA 191
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKAL 228
F +++L+ RG++ GL + RDE +H FA + +R + E++V+ +
Sbjct: 192 FAYVYFLRSRGVLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDAEMEQQVRDM 251
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
+ EAV+ E +F D L + GM M QY++ VADR L LG +YG NPF +MEL
Sbjct: 252 LAEAVDCEVQFAADLLEQGVSGMPLADMRQYLQHVADRRLAMLGIAPMYGSTNPFAFMEL 311
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 312 QDVQELSNFFERRVSAYQ 329
>gi|386839868|ref|YP_006244926.1| ribonucleoside-diphosphate reductase subunit beta [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374100169|gb|AEY89053.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451793162|gb|AGF63211.1| ribonucleoside-diphosphate reductase beta chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 337
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/308 (37%), Positives = 168/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT +E+H + ++AFFA D IV
Sbjct: 19 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPEEQHLIGRLVAFFATGDSIVAN 78
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 79 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 138
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ++ A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 139 REKAEFCFKWINEVEKIDRLDSKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 198
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + +++V ++ EAVE E +F
Sbjct: 199 LHGLATGTNWVFRDETMHMSFAFDVVDTVRKEEPDLFDDQLQQQVTDMLHEAVEAELQFA 258
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN + M QY++ VAD+ L LG+ YG NPF +MEL +Q TNFFE+
Sbjct: 259 HDLCGDGLPGMNTDSMRQYLQCVADQRLTRLGFAPRYGSENPFSFMELQGVQELTNFFER 318
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 319 RPSAYQVA 326
>gi|395771544|ref|ZP_10452059.1| ribonucleoside-diphosphate reductase [Streptomyces acidiscabies
84-104]
Length = 338
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/328 (36%), Positives = 176/328 (53%), Gaps = 21/328 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
M + ++ LL P + + P++YP +E Y+ A + WT EEVDL D+ L+ +E
Sbjct: 1 MTTEAQKNLLDPGFE-LTLRPMRYPDFYERYRDAIKNTWTVEEVDLHSDVSDLAKLSPEE 59
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY
Sbjct: 60 QHLIGRLVAFFATGDSIVANNLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTY 119
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI------DGSETFAER------LIAF-ACV 167
+ D D++ F A+E +P + +KA + WI D +T A+R LI F AC+
Sbjct: 120 LPDPDDRTAAFAAVENIPSIREKAEFCFKWINEVEKLDSLQTKADRRRFLLNLICFAACI 179
Query: 168 EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRT-------KL 220
EG+FF G+F ++W + RGL+ GL + RDE +H FA + +R +
Sbjct: 180 EGLFFYGAFAYVYWFRSRGLLHGLATGTNWVFRDETMHMSFAFEVVDTVRKEEPDLFDET 239
Query: 221 SEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
++ V ++ EAVE E +F D L GMN E M Y+E VAD+ L LG+ +YG
Sbjct: 240 LQKEVTDMLAEAVEAELQFARDLCGEGLPGMNTESMRAYLECVADQRLVRLGFAPVYGSE 299
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKA 308
NPF +MEL +Q TNFFE+R YQ A
Sbjct: 300 NPFSFMELQGVQELTNFFERRPSAYQVA 327
>gi|302867100|ref|YP_003835737.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
gi|315506490|ref|YP_004085377.1| ribonucleotide reductase [Micromonospora sp. L5]
gi|302569959|gb|ADL46161.1| ribonucleotide reductase [Micromonospora aurantiaca ATCC 27029]
gi|315413109|gb|ADU11226.1| ribonucleotide reductase [Micromonospora sp. L5]
Length = 342
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/330 (37%), Positives = 175/330 (53%), Gaps = 25/330 (7%)
Query: 1 MPSIPEEP----LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEAL 56
MP P LL P D + P++YP+ ++ +K A + WT EEVDL DL L
Sbjct: 1 MPVTTTAPTRHMLLDPGMD-LTLRPMRYPRFFDRFKDAIKNTWTVEEVDLHSDLADLAKL 59
Query: 57 TADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL 116
+ E+H V+ ++AFFA D IV NL V E R + Q+ E +H + Y L
Sbjct: 60 SPAERHLVSRLVAFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNL 119
Query: 117 LETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF 164
L+TY+ D E+ F A+E +P +A+KA + WID T A+R LI F
Sbjct: 120 LDTYVPDEKERFAAFDAVENIPSIARKAEFCFRWIDSIFELRELRTRADRRAFLLNLICF 179
Query: 165 -ACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-- 221
AC+EG+FF G+F +++L+ RGL+ GL + RDE +H FA + +R +
Sbjct: 180 AACIEGLFFYGAFAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVETVRAEEPDL 239
Query: 222 -----EERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKL 276
E +VK ++ EAVE E F D L + GM+ M +Y++ VADR L LG +
Sbjct: 240 FDDEMERQVKEMLAEAVECEVSFAEDLLGQGVPGMSLADMREYLQHVADRRLAVLGIAPM 299
Query: 277 YGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
YG NPF +MEL +Q +NFFE+RV YQ
Sbjct: 300 YGSGNPFAFMELQDVQELSNFFERRVSAYQ 329
>gi|345009208|ref|YP_004811562.1| ribonucleotide reductase [Streptomyces violaceusniger Tu 4113]
gi|344035557|gb|AEM81282.1| ribonucleotide reductase [Streptomyces violaceusniger Tu 4113]
Length = 340
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 169/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP+ ++ Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 22 PMRYPEFYDRYRDAIKNTWTVEEVDLHSDVTDLAKLSPGEQHLIGRLVAFFATGDSIVSN 81
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D D++ F A+E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPDDRAAAFAAVENIPSI 141
Query: 141 AKKATWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D E F LI F AC+EG+FF G+F ++WL+ RGL
Sbjct: 142 REKAEFCFRWMDSVEKIDRLETKQDRRRFLLNLICFAACIEGLFFYGAFAYVYWLRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + + ++V ++KEAVE E +F
Sbjct: 202 LHGLATGTNWVFRDESMHMEFAFSVVDTVREEEPDLFDDELRQQVTDMLKEAVEAELQFA 261
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN M +Y++ VAD+ L LG+ ++G NPF +MEL ++Q TNFFE+
Sbjct: 262 RDLCGDGLPGMNTASMQEYLQCVADQRLMRLGFPAVFGSENPFSFMELQNVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RASAYQVA 329
>gi|453055152|gb|EMF02599.1| ribonucleoside-diphosphate reductase [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 340
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/308 (36%), Positives = 167/308 (54%), Gaps = 20/308 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP ++ Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 22 PMRYPDFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 81
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +E+ F A+E +P +
Sbjct: 82 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEERAAAFAAVENIPSI 141
Query: 141 AKKATWALNWIDGSET------------FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
KA + W+D E F LI F AC+EG+FF G+F ++W + RGL
Sbjct: 142 RDKAQFCFKWMDSVEKIDKLESKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 201
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + +++V ++KEAVE E +F
Sbjct: 202 LHGLATGTNWVFRDETMHMNFAFEVVDTVRQEEPDLFDDELQQQVTDMLKEAVEAELQFG 261
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M +Y++ VAD+ L LG+ +YG NPF +MEL ++Q TNFFE+
Sbjct: 262 RDLCGEGLPGMNTESMREYLQCVADQRLQRLGFAPVYGSENPFSFMELQNVQELTNFFER 321
Query: 301 RVGEYQKA 308
R YQ A
Sbjct: 322 RASAYQVA 329
>gi|389730179|ref|ZP_10189354.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 115]
gi|388440951|gb|EIL97271.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 115]
Length = 341
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 180/331 (54%), Gaps = 28/331 (8%)
Query: 1 MPSIPEEPLLAPNPD-RFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTA 58
M + PE P +P + P++YP+ +EMY+ A + WT +EVD S D + ++A
Sbjct: 1 MSTQPEHPQNILDPGFELTLRPMRYPEFYEMYRNAIKNTWTVDEVDFSLDTTDLNSKMSA 60
Query: 59 DEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLE 118
++H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+
Sbjct: 61 ADRHLIHRLIAFFATGDTIVSNNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLD 120
Query: 119 TYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-A 165
TYI D +E+ + F AIE +P + K + WID ET A+R LI F A
Sbjct: 121 TYIPDQNERAKAFSAIENIPSIRAKGEFCFKWIDSIQDISRLETRAQRRQFLLNLICFAA 180
Query: 166 CVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE-- 223
C+EG+FF +F +++ + RGL+ GL + RDE H FA + ++RT +EE
Sbjct: 181 CIEGMFFFAAFAYVYYFRSRGLLHGLASGTNWVFRDESCHMAFA---FEVVRTVRAEEPD 237
Query: 224 --------RVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGK 275
+V+ ++++A+ E +F D L +VG++ + M QY+E+ AD+ L L K
Sbjct: 238 LFDEEMRAQVEEMLEDAIACETQFAEDVLSGGVVGLSSKEMRQYLEYCADQRLAQLDLPK 297
Query: 276 LYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
YG NPFD+M+L +Q TNFFE+RV YQ
Sbjct: 298 KYGAKNPFDFMDLQDVQEVTNFFERRVSAYQ 328
>gi|11544904|emb|CAC17630.1| class I ribonucleotide-diphosphate reductase small subunit chain
[Streptomyces jumonjinensis]
Length = 322
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 167/301 (55%), Gaps = 20/301 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT E+H + ++AFFA D IV
Sbjct: 21 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVTDLAKLTPGEQHLIGRLVAFFATGDSIVAN 80
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 81 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAVENIPSI 140
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 141 REKAQFCFKWMDSVEKIDQLETQADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E ++V +++EAVE E +F
Sbjct: 201 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQQQVTDMLQEAVEAELQFG 260
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M +Y++ VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 261 SDLCGDGLPGMNTESMREYLQCVADQRLTRLGFAPVYGSENPFSFMELQGVQELTNFFER 320
Query: 301 R 301
R
Sbjct: 321 R 321
>gi|408826315|ref|ZP_11211205.1| ribonucleoside-diphosphate reductase [Streptomyces somaliensis DSM
40738]
Length = 339
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 175/329 (53%), Gaps = 30/329 (9%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ LT E+H + ++AFFA D IV
Sbjct: 21 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLTPGEQHLIGRLVAFFATGDSIVAN 80
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D +++ F A+E +P +
Sbjct: 81 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRTAAFAAVENIPSI 140
Query: 141 AKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
+KA + W+D ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 141 REKAAFCFRWMDSVEKLDRLETKADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H FA + +R + + +V ++KEAVE E +F
Sbjct: 201 LHGLATGTNWVFRDETMHMGFAFEVVDTVRKEEPDLFDDELGRQVADMLKEAVEAELQFA 260
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M Y+E VAD+ L LG +YG NPF +MEL +Q TNFFE+
Sbjct: 261 RDLCGDGLPGMNTESMRAYLECVADQRLTRLGLTPVYGSENPFAFMELQGVQELTNFFER 320
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
R YQ A V S++ +DEDF
Sbjct: 321 RPSAYQVA-VEGSVD---------LDEDF 339
>gi|238061574|ref|ZP_04606283.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
39149]
gi|237883385|gb|EEP72213.1| ribonucleoside-diphosphate reductase [Micromonospora sp. ATCC
39149]
Length = 344
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 170/318 (53%), Gaps = 21/318 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP ++ +K A + WT EEVDL DL L+ E+H V+ ++
Sbjct: 15 LLDPGMD-LTLRPMRYPHFFDRFKDAIKNTWTVEEVDLHSDLADLARLSPAERHLVSRLV 73
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V E R + Q+ E +H + Y LL+TY+ D E+
Sbjct: 74 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDERERF 133
Query: 129 RLFHAIETVPCVAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F AIE +P + +KA + WID F LI F AC+EG+FF G+
Sbjct: 134 AAFAAIENIPSIRRKAEFCFRWIDSIFELRELKTREDRRAFLLNLICFAACIEGLFFYGA 193
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKAL 228
F +++L+ RGL+ GL + RDE +H FA + +R + + +V+ +
Sbjct: 194 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTVRHEEPDLFDDELARQVREM 253
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
+ EAVE E +F D L + G++ + M QY++ VADR L LG LYG ANPF +MEL
Sbjct: 254 LAEAVECEAQFAEDLLEQGVSGLSLDDMRQYLQHVADRRLAQLGIAPLYGSANPFAFMEL 313
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 314 QDVQELSNFFERRVSAYQ 331
>gi|357391820|ref|YP_004906661.1| putative ribonucleoside-diphosphate reductase subunit beta
[Kitasatospora setae KM-6054]
gi|311898297|dbj|BAJ30705.1| putative ribonucleoside-diphosphate reductase subunit beta
[Kitasatospora setae KM-6054]
Length = 339
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 173/311 (55%), Gaps = 26/311 (8%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP ++ Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 21 PMRYPSFYDRYRDAIKNTWTVEEVDLHSDVADLAKLSEGERHMIGRLVAFFATGDSIVSN 80
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
N+ + EAR + Q+ E +H + Y LL+TY+ D +++N F A+E +P +
Sbjct: 81 NVVLSLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRNAAFAAVENIPSI 140
Query: 141 AKKATW------ALNWIDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
A+KA + A++ ID + +R LI F ACVEG+FF G+F ++W + RGL
Sbjct: 141 AQKAQFCFKYMNAVDHIDSLRSKEDRRAFLLNLICFAACVEGLFFYGAFAYVYWFRSRGL 200
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RVKALVKEAVEIER 237
+ GL + RDE +H DFA +S++ T EE +V +++EAVE E
Sbjct: 201 LHGLATGTNWVFRDESMHMDFA---FSVVDTVREEEPDLFDDKMARQVTEMLEEAVEAEL 257
Query: 238 EFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNF 297
+F D L GMN E M +Y++ VAD+ L LG YG NPF +MEL ++Q TNF
Sbjct: 258 QFARDLCGEGLPGMNTESMREYLQAVADQRLARLGLPIRYGSTNPFGFMELQNVQELTNF 317
Query: 298 FEKRVGEYQKA 308
FE+RV YQ A
Sbjct: 318 FERRVSAYQIA 328
>gi|119360103|gb|ABL66780.1| At5g40942 [Arabidopsis thaliana]
Length = 231
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/136 (73%), Positives = 114/136 (83%), Gaps = 4/136 (2%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
MPS+PEEP+L P PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD R WE +LT D
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+ HVLAFFAASDGIVLENL+ RFM++VQ++EARAFYGFQIAIENIHSE +LL T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE---ILLRT 117
Query: 120 YIKDSDEKNRLFHAIE 135
+ K + A+E
Sbjct: 118 KFDEDRLKAIVCDAVE 133
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/118 (81%), Positives = 105/118 (88%), Gaps = 3/118 (2%)
Query: 215 LLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYG 274
LLRTK E+R+KA+V +AVEIEREFVCDAL CALVGMN ELMSQYIEFVADRLL ALG G
Sbjct: 114 LLRTKFDEDRLKAIVCDAVEIEREFVCDALSCALVGMNRELMSQYIEFVADRLLAALGCG 173
Query: 275 KLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGG---NHVFKIDEDF 329
K+YGV NPFDWMELISLQGKTNFFEKRVGEYQKASVMSS++GN +HVFK+DEDF
Sbjct: 174 KVYGVTNPFDWMELISLQGKTNFFEKRVGEYQKASVMSSVHGNAAFNDDHVFKLDEDF 231
>gi|389794223|ref|ZP_10197381.1| ribonucleoside-diphosphate reductase [Rhodanobacter fulvus Jip2]
gi|388432748|gb|EIL89737.1| ribonucleoside-diphosphate reductase [Rhodanobacter fulvus Jip2]
Length = 341
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 169/310 (54%), Gaps = 27/310 (8%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D R + ++A ++H + ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIRRLVAFFATGDTIVS 81
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TYI D E+N F AIET+P
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPAERNAAFAAIETIPS 141
Query: 140 VAKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +K + WID ET A R LI F AC+EG+FF +F +++L+ RG
Sbjct: 142 IQQKGAFCFKWIDSIQGLRRLETRAHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RVKALVKEAVEIE 236
L+ GL + RDE H FA + ++RT +E +V+ +++EA+ E
Sbjct: 202 LLHGLAAGTNWVFRDESCHMAFA---FDVVRTVREQEPDLFDADMRAQVEQMMEEAIACE 258
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
+F D L + GM+ + M QY+E+ AD+ L K YG NPFD+M+L +Q N
Sbjct: 259 TQFAEDVLSGGVAGMSVKDMRQYLEYCADQRFAQLDMPKKYGAKNPFDFMDLQDVQELAN 318
Query: 297 FFEKRVGEYQ 306
FFE+RV YQ
Sbjct: 319 FFERRVSAYQ 328
>gi|307107666|gb|EFN55908.1| hypothetical protein CHLNCDRAFT_57791 [Chlorella variabilis]
Length = 849
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 170/310 (54%), Gaps = 41/310 (13%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWT---------------------AEEVD 45
+PLL NPDR+CMFP++ ++W YKKAEAS + AE+VD
Sbjct: 557 KPLLDENPDRYCMFPLKEDRVWSQYKKAEASRPSGQAPNDPLCMAHTTFWTTFWTAEDVD 616
Query: 46 LSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIA 104
S D R W+ L E+ F++ VLA+ AASD ++ N+ RFM +V++AEARAFY FQ+
Sbjct: 617 FSSDARDWQDRLAPGERSFLSSVLAYLAASDRLIQHNVVARFMIDVELAEARAFYAFQLF 676
Query: 105 IENIHSEMYSLLLETYIKDSDEK-NRLFHAIETVPCVAKKATWALNWIDGSETFAERLIA 163
+N+H+EM S +L +E+ + + +P KA W WI+ T A L
Sbjct: 677 KKNVHTEMVSAILAALFAGKEEQLAAVLRTVLALPAFQAKAAWVRKWINRQATAAAALPP 736
Query: 164 FACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE 223
G+ + +LISRDEG+H + A ++YSLLR+KL++
Sbjct: 737 LLLPRGLLPGTGH-----------------ATDLISRDEGVHVESAGVMYSLLRSKLTDS 779
Query: 224 RVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGV-ANP 282
+ + +V EAVE ER FVC LP G+ M +Y+++V DRLLGALG+ LY V ANP
Sbjct: 780 QAQGIVGEAVEAERAFVCGQLPLEATGLEAGAMEEYLQYVGDRLLGALGHAPLYRVAANP 839
Query: 283 FDWMELISLQ 292
W+E I+++
Sbjct: 840 LPWLEGIAMK 849
>gi|159040364|ref|YP_001539617.1| ribonucleoside-diphosphate reductase [Salinispora arenicola
CNS-205]
gi|157919199|gb|ABW00627.1| Ribonucleoside-diphosphate reductase [Salinispora arenicola
CNS-205]
Length = 350
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 173/318 (54%), Gaps = 21/318 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP ++ +K+A + WT EEVDL DL L+ E+H V+ ++
Sbjct: 21 LLDPGMD-LTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLADLAKLSPAERHLVSRLV 79
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V E R + Q+ E +H + Y LL+TY+ D E+
Sbjct: 80 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEKERF 139
Query: 129 RLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGS 175
F A+E +P +A+KA + WID T A+R LI F AC+EG+FF G+
Sbjct: 140 AAFAAVENIPSIARKAEFCFRWIDSIFELRELRTRADRRAFLLNLICFAACIEGLFFYGA 199
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKAL 228
F +++L+ RGL+ GL + RDE +H FA + +R + E ++K +
Sbjct: 200 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTIRAEEPDLFDADLERQIKDM 259
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
V EAV+ E +F D L + G++ M +Y++ VADR L LG +YG NPF +MEL
Sbjct: 260 VTEAVDCEAQFAEDLLEQGVSGLSLADMREYLQHVADRRLVTLGIAPIYGSQNPFAFMEL 319
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 320 QDVQELSNFFERRVSAYQ 337
>gi|145596896|ref|YP_001161193.1| ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
gi|145306233|gb|ABP56815.1| Ribonucleoside-diphosphate reductase [Salinispora tropica CNB-440]
Length = 350
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 172/318 (54%), Gaps = 21/318 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP ++ +K+A + WT EEVDL DL L++ E+H V+ ++
Sbjct: 21 LLDPGMD-LTLRPMRYPHFFDRFKEAIKNTWTVEEVDLHSDLGDLAKLSSAERHLVSRLV 79
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V E R + Q+ E +H + Y LL+TY+ + E+
Sbjct: 80 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPEEKERF 139
Query: 129 RLFHAIETVPCVAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F A+E +P +A+KA + WID F LI F AC+EG+FF G+
Sbjct: 140 AAFAAVENIPSIARKAEFCFRWIDSIFELRELRTQADRRAFLLNLICFAACIEGLFFYGA 199
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKAL 228
F +++L+ RGL+ GL + RDE +H FA + +R + E +VK +
Sbjct: 200 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDADLERQVKEM 259
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
V EAV+ E +F D L + G++ M +Y++ VADR L LG +YG ANPF +MEL
Sbjct: 260 VAEAVDCEVQFAEDLLEQGVSGLSLADMREYLQHVADRRLVTLGIAPMYGSANPFAFMEL 319
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 320 QDVQELSNFFERRVSAYQ 337
>gi|386845602|ref|YP_006263615.1| ribonucleoside-diphosphate reductase subunit beta [Actinoplanes sp.
SE50/110]
gi|359833106|gb|AEV81547.1| ribonucleoside-diphosphate reductase beta chain [Actinoplanes sp.
SE50/110]
Length = 331
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 116/318 (36%), Positives = 170/318 (53%), Gaps = 21/318 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP ++ +K A + WT EEVDL DL L+ EKH V+ ++
Sbjct: 2 LLDPGMD-LTLRPMKYPHFFDRFKDAIKNTWTVEEVDLHSDLADLAVLSDAEKHLVSRLV 60
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V E R + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDEAERF 120
Query: 129 RLFHAIETVPCVAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F AIE +P +A+KA + WID F +I F AC+EG+FF G+
Sbjct: 121 EAFAAIENIPSIARKAEFCFKWIDSVFDLRRLETREHRRAFLLNVICFAACIEGLFFYGA 180
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKAL 228
F +++L+ RG++ GL + RDE +H FA + +R + +++V+ +
Sbjct: 181 FAYVYFLRSRGVLQGLASGTNWVFRDESMHMAFAFDVVDQVRREEPDLFDAEMQQQVRDM 240
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
+ EAVE E +F D L + GM+ M +Y++ VADR L LG +YG NPF +MEL
Sbjct: 241 LAEAVECEVQFAADLLEQGVSGMSLADMREYLQHVADRRLQVLGIAPVYGSKNPFAFMEL 300
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 301 QDVQELSNFFERRVSAYQ 318
>gi|291303011|ref|YP_003514289.1| ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
DSM 44728]
gi|290572231|gb|ADD45196.1| Ribonucleoside-diphosphate reductase [Stackebrandtia nassauensis
DSM 44728]
Length = 338
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 121/341 (35%), Positives = 174/341 (51%), Gaps = 31/341 (9%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP +E ++ A + WT EEVDL+ DL T E+H + ++
Sbjct: 9 LLDPGMD-LTLRPMRYPDFYEQFRAAIRNTWTVEEVDLASDLPDLATFTDSERHLINRLV 67
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V EAR + Q+ E +H + Y LL+TY+ D +++
Sbjct: 68 AFFATGDTIVANNLVLNLYKHVNAPEARLYLSRQLYEEAVHVQFYLTLLDTYLPDPEDRV 127
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAE------------RLIAF-ACVEGIFFSGS 175
+ F A+E +P + +KA + WID + E LI F AC+EG+FF G+
Sbjct: 128 KAFAAVEHIPSIKEKAEFCFKWIDTIDQLDELRTPEDRRAFLLNLICFAACIEGLFFYGA 187
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKAL 228
F ++WL+ RGL+ GL + RDE H +FA + ++R + E E V +
Sbjct: 188 FAYVYWLRSRGLLDGLATGTNWVFRDESCHMNFAFSVVDVVRNEEPELFDDELTEAVTRM 247
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
++EAV E +F D + GM M Y+E+VAD+ L LG YG NPF +M L
Sbjct: 248 IEEAVAAELQFARDLCGEGMPGMTVNDMKSYLEYVADQRLTRLGMPVRYGSKNPFGFMAL 307
Query: 289 ISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+Q TNFFE+R YQ A GG +DEDF
Sbjct: 308 QDVQELTNFFERRPTAYQVAV--------GG--TVDLDEDF 338
>gi|383315471|ref|YP_005376313.1| ribonucleotide reductase subunit beta [Frateuria aurantia DSM 6220]
gi|379042575|gb|AFC84631.1| ribonucleotide reductase, beta subunit [Frateuria aurantia DSM
6220]
Length = 340
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 172/325 (52%), Gaps = 22/325 (6%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTAD-EK 61
S P +L P + + P++YPQ +EM+K + WT EE++ D+ + D E+
Sbjct: 4 STPHSHILDPGFE-LTLRPMKYPQYFEMFKNGIKNTWTVEEINFQIDISDLHSKMNDAER 62
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+ YI
Sbjct: 63 HLIYRLVAFFATGDTIVANNLVLNLYQHINAPEARMYLSRQLYEEALHIQFYLTLLDNYI 122
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGS------ETFAER------LIAF-ACVE 168
D +E+ + F AIE +P + KK + WID E+ A+R LI F AC+E
Sbjct: 123 PDINERQKAFAAIENIPSIKKKGDFCFKWIDSVQNLHRLESKADRKQFLLNLICFAACIE 182
Query: 169 GIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS------- 221
G+FF G+F +++L+ +GL+PGL + RDE H +FA + +R +
Sbjct: 183 GLFFYGAFSYVYYLRDKGLLPGLASGTNWVFRDESCHMEFAFDVVKTVREQEPDLFDAEL 242
Query: 222 EERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVAN 281
E +V +++EA++ E F D L ++G ++M QY+E+ AD LG Y V+N
Sbjct: 243 EAQVYEMLEEAIQCETAFADDVLGLGVMGFTPKMMRQYLEYCADDRFRRLGMAPKYNVSN 302
Query: 282 PFDWMELISLQGKTNFFEKRVGEYQ 306
P WMEL +Q TNFFE+RV YQ
Sbjct: 303 PLPWMELQDVQELTNFFERRVTAYQ 327
>gi|430741872|ref|YP_007201001.1| ribonucleotide reductase subunit beta [Singulisphaera acidiphila
DSM 18658]
gi|430013592|gb|AGA25306.1| ribonucleotide reductase, beta subunit [Singulisphaera acidiphila
DSM 18658]
Length = 332
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 172/319 (53%), Gaps = 22/319 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHV 67
LL P D + P++YP +EMYK A + WT EEVD S DL + +T EKH + +
Sbjct: 2 LLDPGMD-LTLRPMRYPAFFEMYKAAIKNTWTVEEVDFSTDLADLDRRITPAEKHLIQRL 60
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
+AFFA D IV NL + EAR + Q+ E++H Y LL+ Y+ D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYQHINSPEARMYLSRQLYEESLHVHFYLTLLDNYLPDMAER 120
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSE------TFAER------LIAFA-CVEGIFFSG 174
+ F AIE +P + KA + WID E T A R LI FA C+EG+FF
Sbjct: 121 EQAFAAIENIPSIKGKADFCFRWIDSIEGLDRLETRAHRRQFLLNLICFAACIEGLFFFA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK-------LSEERVKA 227
+F +++L+ +GL+ GL + RDE H FA + ++ R + E V A
Sbjct: 181 AFAYVYFLRSKGLLHGLATGTNWVFRDESAHIAFAFNVIAIARREEPDLFDAALEADVVA 240
Query: 228 LVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
+++EAVE E F D L +VGM+ + + +Y+E+VADR L +LG +YG NP +ME
Sbjct: 241 MMREAVECETAFARDVLSFGVVGMSLQDLRKYLEYVADRRLESLGIAPIYGSRNPLAFME 300
Query: 288 LISLQGKTNFFEKRVGEYQ 306
L +Q NFFE+RV YQ
Sbjct: 301 LQDVQELANFFERRVSAYQ 319
>gi|117928932|ref|YP_873483.1| ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
11B]
gi|117649395|gb|ABK53497.1| Ribonucleoside-diphosphate reductase [Acidothermus cellulolyticus
11B]
Length = 348
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 165/318 (51%), Gaps = 21/318 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP +E +K A + WT EEVDL DL L+ E H V ++
Sbjct: 19 LLDPGMD-LTLRPMRYPHFFERFKAAIRNTWTVEEVDLHSDLADLRKLSPAEHHLVKRLV 77
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL + EAR + Q+ E +H + Y LL+TYI D E+
Sbjct: 78 AFFATGDTIVANNLVLNLYQHINSPEARLYLSRQLFEEAVHVQFYLALLDTYITDERERA 137
Query: 129 RLFHAIETVPCVAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F AIE +P + +KA + WID +F LI F AC+EG+FF G+
Sbjct: 138 EAFAAIENIPSIKRKADFCFRWIDSIFDLRELRTAADRRSFLLNLICFAACIEGLFFYGA 197
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKAL 228
F +++L+ RGL+ GL + RDE +H FA + +R + E + + +
Sbjct: 198 FAYVYFLRSRGLLNGLASGTNWVFRDESMHMAFAFDVIDTVRREEPELFDDELARQAREM 257
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
+ EAV+ E +F D L + GM+ M Y+E VADR LG +YG NPF +MEL
Sbjct: 258 LAEAVDCETQFAEDLLGQGVPGMSLADMRSYLEHVADRRCVQLGLEPIYGSPNPFTFMEL 317
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 318 QDVQELSNFFERRVAAYQ 335
>gi|281207436|gb|EFA81619.1| hypothetical protein PPL_05610 [Polysphondylium pallidum PN500]
Length = 1292
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 139/200 (69%), Gaps = 1/200 (0%)
Query: 42 EEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYG 100
E++ L D+R W+ L +E++ ++++L FF + GI+ EN+ FM+EVQ+ EAR FY
Sbjct: 56 EDLFLLNDVRDWQCKLDDNERYLISNILGFFVSIAGIINENIITHFMSEVQIPEARTFYS 115
Query: 101 FQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAER 160
QIA+ENI SE YSLL++ YIKD+DEK+++F+AIE++PCV +K W L ++ S++ AER
Sbjct: 116 MQIAMENIQSEKYSLLIDAYIKDTDEKSKIFNAIESIPCVKRKCEWLLKSMNNSKSLAER 175
Query: 161 LIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKL 220
LIAFA VE I +S SFC I W KR LMP L+ I +E HC+F LLYS L KL
Sbjct: 176 LIAFAAVESILYSASFCVILWFHKRSLMPKLSEYYSFIVSNEYTHCEFGRLLYSKLINKL 235
Query: 221 SEERVKALVKEAVEIEREFV 240
E +++++++AV+ E++ +
Sbjct: 236 DTEMIESIIRDAVDCEKQIM 255
>gi|389774176|ref|ZP_10192323.1| ribonucleoside-diphosphate reductase [Rhodanobacter spathiphylli
B39]
gi|388438591|gb|EIL95336.1| ribonucleoside-diphosphate reductase [Rhodanobacter spathiphylli
B39]
Length = 341
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 166/310 (53%), Gaps = 27/310 (8%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D R + ++ ++H + ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIRNTWTVEEVDFSMDTRDLDTKMSPADRHLIQRLVAFFATGDTIVS 81
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TYI D E+N F AIET+P
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPTERNAAFAAIETIPS 141
Query: 140 VAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +K + WID F LI F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQGLQRLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RVKALVKEAVEIE 236
L+ GL + RDE H FA + ++RT ++E +++ ++++A+ E
Sbjct: 202 LLHGLAAGTNWVFRDESCHMAFA---FDVVRTVRAQEPELFDDAMRAQIEEMMEDAIACE 258
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
+F D L + GM+ + M QY+E+ AD+ L K YG NPFD+M+L +Q N
Sbjct: 259 TQFAEDVLSGGVAGMSVKDMRQYLEYCADQRFVQLDLPKKYGAKNPFDFMDLQDVQELAN 318
Query: 297 FFEKRVGEYQ 306
FFE+RV YQ
Sbjct: 319 FFERRVSAYQ 328
>gi|389799150|ref|ZP_10202153.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 116-2]
gi|388443609|gb|EIL99751.1| ribonucleoside-diphosphate reductase [Rhodanobacter sp. 116-2]
Length = 341
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 166/310 (53%), Gaps = 27/310 (8%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D R + ++A ++H + ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIQRLVAFFATGDTIVS 81
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TYI D E+N F AIET+P
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDTYIPDPAERNGAFAAIETIPS 141
Query: 140 VAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +K + WID F LI F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQDLRQLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RVKALVKEAVEIE 236
L+ GL + RDE H FA + ++RT ++E +V+ ++ +A+ E
Sbjct: 202 LLHGLAAGTNWVFRDESGHMAFA---FEVVRTVRAQEPELFDDAMRAQVEEMMGDAIACE 258
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
+F D L + GM+ + M QY+E+ AD+ L K YG NPFD+M+L +Q N
Sbjct: 259 TQFAEDVLSGGVAGMSVKDMRQYLEYCADQRFVQLDLPKKYGAKNPFDFMDLQDVQELAN 318
Query: 297 FFEKRVGEYQ 306
FFE+RV YQ
Sbjct: 319 FFERRVSAYQ 328
>gi|11544907|emb|CAC17632.1| class I ribonucleotide-diphosphate reductase small chain
[Streptomyces microflavus]
Length = 321
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 166/301 (55%), Gaps = 20/301 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLE 80
P++YP +E Y+ A + WT EEVDL D+ L+ E+H + ++AFFA D IV
Sbjct: 20 PMRYPDFYERYRDAIKNTWTVEEVDLHSDVADLAKLSPGEQHMIGRLVAFFATGDSIVAN 79
Query: 81 NLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCV 140
NL + EAR + Q+ E +H + Y LL+TY+ D E+ F A+E +P +
Sbjct: 80 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPAERAAAFAAVENIPSI 139
Query: 141 AKKATWALNW------IDGSETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRGL 187
KA + W ID ET A+R LI F AC+EG+FF G+F ++W + RGL
Sbjct: 140 RDKAQFCFKWMDSVEKIDQLETRADRRRFLLNLICFAACIEGLFFYGAFAYVYWFRSRGL 199
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEIEREFV 240
+ GL + RDE +H +FA + +R + E E+V A++KEAVE E +F
Sbjct: 200 LHGLATGTNWVFRDETMHMNFAFEVVDTVRKEEPELFDDALQEQVTAMLKEAVEAELQFG 259
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D L GMN E M +Y++ VAD+ L LG+ +YG NPF +MEL +Q TNFFE+
Sbjct: 260 RDLCGEGLPGMNTESMREYLQCVADQRLTRLGFAPVYGSENPFAFMELQGVQELTNFFER 319
Query: 301 R 301
R
Sbjct: 320 R 320
>gi|443290856|ref|ZP_21029950.1| Ribonucleoside-diphosphate reductase [Micromonospora lupini str.
Lupac 08]
gi|385886411|emb|CCH18024.1| Ribonucleoside-diphosphate reductase [Micromonospora lupini str.
Lupac 08]
Length = 345
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/318 (35%), Positives = 169/318 (53%), Gaps = 21/318 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
LL P D + P++YP ++ ++ A + WT EEVDL DL + L+ E+H V+ ++
Sbjct: 16 LLDPGMD-LTLRPMRYPHFFDRFRAAIRNTWTVEEVDLHADLADLDKLSPAERHLVSRLV 74
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFA D IV NL V E R + Q+ E +H + Y LL+TY+ D E+
Sbjct: 75 AFFATGDTIVANNLVLNLYQHVNSPEGRLYLSRQLFEEAVHVQFYLNLLDTYVPDETERF 134
Query: 129 RLFHAIETVPCVAKKATWALNWIDG------------SETFAERLIAF-ACVEGIFFSGS 175
F AIE +P + +KA + WID F LI F AC+EG+FF G+
Sbjct: 135 AAFAAIENIPSIRRKAEFCFRWIDSLGELRELRTSDDRRAFLLNLICFAACIEGLFFYGA 194
Query: 176 FCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKAL 228
F +++L+ RGL+ GL + RDE +H FA + +R + + ++V+ +
Sbjct: 195 FAYVYFLRSRGLLHGLASGTNWVFRDESMHMAFAFDVVDTVRAEEPDLFDDDLADQVRQM 254
Query: 229 VKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMEL 288
+ EAVE E +F D + + G+ M +Y++ VADR L LG YG ANPF +MEL
Sbjct: 255 LTEAVECEVQFAEDLVGQGVPGLTLADMREYLQHVADRRLVQLGIAPHYGSANPFAFMEL 314
Query: 289 ISLQGKTNFFEKRVGEYQ 306
+Q +NFFE+RV YQ
Sbjct: 315 QDVQELSNFFERRVSAYQ 332
>gi|347756560|ref|YP_004864123.1| ribonucleotide reductase subunit beta [Candidatus
Chloracidobacterium thermophilum B]
gi|347589077|gb|AEP13606.1| Ribonucleotide reductase, beta subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 332
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 170/307 (55%), Gaps = 21/307 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D+ + LT E+H + ++AFFA D IV
Sbjct: 13 PMKYPLFYEMYRNAVKNTWTVEEVDFSTDVADLHSRLTPAERHLIHRLVAFFATGDSIVG 72
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TYI D E+ R F A+ +P
Sbjct: 73 NNLVLNLYKHINAPEARMYLSRQLFEEALHVQFYLTLLDTYIPDLAERERAFAAVHNIPS 132
Query: 140 VAKKATWALNWIDG------------SETFAERLIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+A+KA + WID F L+ FA CVEG+FF +F +++L+ +G
Sbjct: 133 IARKAQFCQRWIDSIFLLDELHTREDRRKFLLNLLCFASCVEGLFFFAAFAYVYFLRSKG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRT---KLSEERVKA----LVKEAVEIEREF 239
L+ GL + RDE LH +FA + +R +L ++ ++A +++EAV+ E +F
Sbjct: 193 LLHGLASGTNWVFRDESLHMNFAFAVADQVRQEEPELFDDAMEAALVQMIEEAVDCEMQF 252
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
D L + G++ M QY+EFVAD+ L LG + + V NPF +M+L +Q TNFFE
Sbjct: 253 AEDLLSGGVAGLSLADMRQYLEFVADQRLARLGCERRFYVRNPFPFMDLQDVQEVTNFFE 312
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 313 RRVAAYQ 319
>gi|42523460|ref|NP_968840.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus HD100]
gi|39575666|emb|CAE79833.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus HD100]
Length = 336
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 165/319 (51%), Gaps = 22/319 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHV 67
+L P D + P++YP +EMYK + WT +EVD S DL + +T EKH + +
Sbjct: 6 ILDPGFD-LTLRPMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSKMTESEKHLIRRL 64
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
+AFFA D IV NL V E R + Q+ E +H + Y LL+ YI + DE+
Sbjct: 65 VAFFATGDSIVGNNLVLNLYKHVNSPEGRMYLSRQLYEEALHVQFYLTLLDNYIPNPDER 124
Query: 128 NRLFHAIETVPCVAKKATWALNWIDGSETFAE------------RLIAFA-CVEGIFFSG 174
F A+E +P + KKA + WID E LI FA CVEG+FF
Sbjct: 125 AEAFAAVENIPSIKKKADFCYKWIDSINELTELNTIEDRRRFLMNLICFATCVEGLFFYA 184
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------TKLSEERVKA 227
+F +++L+ +GL+ GL + RDE +H FA + R + E+ V
Sbjct: 185 AFAYVYFLRSKGLLAGLASGTNWVFRDESMHMAFAIEVVKTARKEEPELFNQQMEDMVVQ 244
Query: 228 LVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
++++A+E E EF D L + G++ + M QY+E+ AD+ L +L Y V NPF +ME
Sbjct: 245 MLEDAIECEMEFAHDVLNLGVAGLSAKDMRQYLEYCADQRLESLNIAPRYNVKNPFIFME 304
Query: 288 LISLQGKTNFFEKRVGEYQ 306
L +Q NFFE+RV YQ
Sbjct: 305 LQDMQELANFFERRVSAYQ 323
>gi|352086179|ref|ZP_08953758.1| Ribonucleoside-diphosphate reductase [Rhodanobacter sp. 2APBS1]
gi|351679813|gb|EHA62947.1| Ribonucleoside-diphosphate reductase [Rhodanobacter sp. 2APBS1]
Length = 341
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 166/310 (53%), Gaps = 27/310 (8%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P++YP +EMY+ A + WT EEVD S D R + ++A ++H + ++AFFA D IV
Sbjct: 22 PMRYPGFYEMYRNAIKNTWTVEEVDFSMDTRDLDTKMSAADRHLIQRLVAFFATGDTIVS 81
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+ YI D E+N F AIET+P
Sbjct: 82 NNLVLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDAYIPDPAERNGAFAAIETIPS 141
Query: 140 VAKKATWALNWIDGSETFAE------------RLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +K + WID + + LI F AC+EG+FF +F +++L+ RG
Sbjct: 142 IRQKGAFCFKWIDSIQDLPQLETREHRRQFLLNLICFAACIEGLFFYAAFAYVYYLRSRG 201
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RVKALVKEAVEIE 236
L+ GL + RDE H FA + ++RT ++E +V+ ++++A+ E
Sbjct: 202 LLHGLAAGTNWVFRDESGHMAFA---FEVVRTVRAQEPELFDDAMRAQVEEMMEDAIACE 258
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
F D L + GM+ + M QY+E+ AD+ L K YG NPFD+M+L +Q N
Sbjct: 259 TRFAEDVLSGGVAGMSVKDMRQYLEYCADQRFVQLDLPKKYGAKNPFDFMDLQDVQELAN 318
Query: 297 FFEKRVGEYQ 306
FFE+RV YQ
Sbjct: 319 FFERRVSAYQ 328
>gi|405354037|ref|ZP_11023446.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Chondromyces apiculatus DSM 436]
gi|397092728|gb|EJJ23477.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 336
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 174/321 (54%), Gaps = 22/321 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHV 67
LL P + + P+ YPQ +EMY+ A + WT EEVD S DL + +T E+H + +
Sbjct: 2 LLNPGLN-LTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
+AFFA D IV NL + EAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAER 120
Query: 128 NRLFHAIETVPCVAKKATWALNWID---GSETFAER---------LIAFA-CVEGIFFSG 174
+ F A++ +P + +KA + + W+D G +T + LI FA C+EG+FF
Sbjct: 121 AKAFAAVDNIPSIQRKAQFCMKWMDSIQGMDTLQTKAHRRQFLLNLICFAGCIEGLFFFA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK-------LSEERVKA 227
+F +++L+ +GL+ GL + RDE H FA + R + E V A
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERDVVA 240
Query: 228 LVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
+++EAV+ E +F D L +VG++ + M Y+E+VAD+ L LG ++G NP +M+
Sbjct: 241 MLREAVDCETQFAQDLLSGGVVGLSVQDMRGYLEYVADQRLQQLGMSPVFGTKNPLHFMD 300
Query: 288 LISLQGKTNFFEKRVGEYQKA 308
L +Q TNFFE+RV YQ A
Sbjct: 301 LQDVQELTNFFERRVSSYQVA 321
>gi|426403937|ref|YP_007022908.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425860605|gb|AFY01641.1| ribonucleotide-diphosphate reductase small chain [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 332
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/319 (35%), Positives = 165/319 (51%), Gaps = 22/319 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHV 67
+L P D + P++YP +EMYK + WT +EVD S DL + +T EKH + +
Sbjct: 2 ILDPGFD-LTLRPMKYPIFYEMYKNGIKNTWTVDEVDFSTDLVDLHSKMTESEKHLIRRL 60
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
+AFFA D IV NL V E R + Q+ E +H + Y LL+ YI + DE+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHVNSPEGRMYLSRQLYEEALHVQFYLTLLDNYIPNPDER 120
Query: 128 NRLFHAIETVPCVAKKATWALNWIDG------------SETFAERLIAFA-CVEGIFFSG 174
F A+E +P + KKA + WID F LI FA CVEG+FF
Sbjct: 121 AEAFAAVENIPSIKKKADFCYKWIDSINELNELKTIEDRRRFLMNLICFATCVEGLFFYA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-------TKLSEERVKA 227
+F +++L+ +GL+ GL + RDE +H FA + R + E+ V
Sbjct: 181 AFAYVYFLRSKGLLAGLASGTNWVFRDESMHMAFAIEVVKTARREEPELFNQQMEDMVVQ 240
Query: 228 LVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
++++A+E E EF D L + G++ + M QY+E+ AD+ L +L Y V NPF +ME
Sbjct: 241 MLEDAIECEMEFAHDVLNLGVAGLSAKDMRQYLEYCADQRLESLNIAPRYNVKNPFIFME 300
Query: 288 LISLQGKTNFFEKRVGEYQ 306
L +Q NFFE+RV YQ
Sbjct: 301 LQDMQELANFFERRVSAYQ 319
>gi|148700272|gb|EDL32219.1| mCG1034315 [Mus musculus]
Length = 213
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 110/139 (79%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW MYK+A ASFWT EEVDLS++L HW L +DEK+F++
Sbjct: 74 EEPLLRKSSRRFVIFPIQYPDIWRMYKQARASFWTGEEVDLSKNLPHWNKLKSDEKYFIS 133
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV E FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 134 HILAFFAASDGIVNENLVERFSQEVQVPETHCFYGFQILIENVHSEMYSLLIDTYIRDPK 193
Query: 126 EKNRLFHAIETVPCVAKKA 144
++ LF+AIET+P V KKA
Sbjct: 194 KREFLFNAIETMPYVKKKA 212
>gi|338536259|ref|YP_004669593.1| ribonucleoside-diphosphate reductase [Myxococcus fulvus HW-1]
gi|337262355|gb|AEI68515.1| Ribonucleoside-diphosphate reductase [Myxococcus fulvus HW-1]
Length = 336
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/321 (35%), Positives = 174/321 (54%), Gaps = 22/321 (6%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHV 67
LL P + + P+ YPQ +EMY+ A + WT EEVD S DL + +T E+H + +
Sbjct: 2 LLNPGLN-LTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRL 60
Query: 68 LAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEK 127
+AFFA D IV NL + EAR + Q+ E +H + Y LL+TY+ D E+
Sbjct: 61 VAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPGER 120
Query: 128 NRLFHAIETVPCVAKKATWALNWID---GSETFAER---------LIAFA-CVEGIFFSG 174
+ F AI+ +P + +KA + + W+D G +T + LI FA C+EG+FF
Sbjct: 121 AKAFAAIDNIPSIQRKAQFCMKWMDSIQGLDTLQTKAHRRQFLLNLICFAGCIEGLFFFA 180
Query: 175 SFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK-------LSEERVKA 227
+F +++L+ +GL+ GL + RDE H FA + R + E V A
Sbjct: 181 AFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERDVVA 240
Query: 228 LVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
+++EAV+ E +F D L ++G++ + M Y+E+VAD+ L LG ++G NP +M+
Sbjct: 241 MLREAVDCETQFAQDLLSGGVMGLSVQDMRGYLEYVADQRLQMLGMSPVFGTKNPLHFMD 300
Query: 288 LISLQGKTNFFEKRVGEYQKA 308
L +Q TNFFE+RV YQ A
Sbjct: 301 LQDVQELTNFFERRVSSYQVA 321
>gi|256825983|ref|YP_003149943.1| ribonucleotide reductase subunit beta [Kytococcus sedentarius DSM
20547]
gi|256689376|gb|ACV07178.1| ribonucleotide reductase, beta subunit [Kytococcus sedentarius DSM
20547]
Length = 365
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 165/310 (53%), Gaps = 27/310 (8%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASDGIVL 79
P++YPQ +EM++ A + WT EE+DL DL L+ E+H V+ ++AFFA D IV
Sbjct: 46 PMRYPQFYEMFRDAIKNTWTVEEIDLHSDLADLHNKLSPAERHLVSRLVAFFATGDTIVA 105
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TY+ D E+ F A+E +P
Sbjct: 106 NNLVLNLYEHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYVPDEAERFEAFAAVENIPS 165
Query: 140 VAKKATWALNWIDGSETFAE------------RLIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ KA + WID E + LI F C+EG+FF G+F +++L+ RG
Sbjct: 166 IRTKAEFCFTWIDSIENLGQLETKEQRRQFLLNLICFGTCIEGLFFYGAFAYVYFLRSRG 225
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RVKALVKEAVEIE 236
L+ GL + RDE +H FA + ++ T SEE +V+ ++ EAV+ E
Sbjct: 226 LLNGLASGTNWVFRDESMHMAFA---FEVVETVRSEEPDLFDAEMAGQVRQMLMEAVDAE 282
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
+F D L + G++ M Y+E VADR LG ++YG NP +MEL +Q +N
Sbjct: 283 AQFAEDLLGMGVAGLSVADMRAYLENVADRRAVQLGMPEIYGTKNPLAFMELQDVQELSN 342
Query: 297 FFEKRVGEYQ 306
FFE+RV YQ
Sbjct: 343 FFERRVSAYQ 352
>gi|108763495|ref|YP_633213.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
xanthus DK 1622]
gi|108467375|gb|ABF92560.1| ribonucleoside-diphosphate reductase, beta subunit [Myxococcus
xanthus DK 1622]
Length = 349
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 115/324 (35%), Positives = 174/324 (53%), Gaps = 22/324 (6%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFV 64
E LL P + + P+ YPQ +EMY+ A + WT EEVD S DL + +T E+H +
Sbjct: 12 EAMLLNPGLN-LTLRPMAYPQFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLI 70
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
++AFFA D IV NL + EAR + Q+ E +H + Y LL+TY+ D
Sbjct: 71 HRLVAFFATGDSIVGNNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDP 130
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSE------TFAER------LIAFA-CVEGIF 171
E+ F A++ +P + +KA + + W+D + T A R LI FA C+EG+F
Sbjct: 131 AERAMAFAAVDNIPSIQRKAQFCMKWMDSIQGLDTLQTKAHRRQFLLNLICFAGCIEGLF 190
Query: 172 FSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK-------LSEER 224
F +F +++L+ +GL+ GL + RDE H FA + R + E
Sbjct: 191 FFAAFAYVYFLRSKGLLNGLAAGTNWVFRDESAHMAFAFESIQVARKEEPDLFDAQMERD 250
Query: 225 VKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFD 284
V A+++EAVE E +F D L ++G++ + M Y+E+VAD+ L LG ++G NP
Sbjct: 251 VVAMLREAVECETQFAQDLLSGGVMGLSVQDMRGYLEYVADQRLQMLGMTPVFGTKNPLH 310
Query: 285 WMELISLQGKTNFFEKRVGEYQKA 308
+M+L +Q TNFFE+RV YQ A
Sbjct: 311 FMDLQDVQELTNFFERRVSSYQVA 334
>gi|440796690|gb|ELR17799.1| ribonucleosidediphosphate reductase, beta subunit [Acanthamoeba
castellanii str. Neff]
Length = 171
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 116/142 (81%), Gaps = 3/142 (2%)
Query: 112 MYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI--DGSETFAERLIAFACVEG 169
MYSLL++TY+KD+ EK LF+A +T+P + KKA WAL WI +G ETF +RL+ FA VEG
Sbjct: 1 MYSLLIDTYVKDTAEKAHLFNAAQTIPSIKKKADWALKWIATEGVETFGQRLVGFAAVEG 60
Query: 170 IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALV 229
IFFS S C+IFWLKKRGLMPGL FSNELISRDEGLHCDFACLLYS+L K S++ + ++
Sbjct: 61 IFFSSS-CSIFWLKKRGLMPGLAFSNELISRDEGLHCDFACLLYSMLVNKPSDDVTRQII 119
Query: 230 KEAVEIEREFVCDALPCALVGM 251
EAVE+E+EFV ++LP AL+GM
Sbjct: 120 LEAVEMEKEFVTESLPVALIGM 141
>gi|66802406|ref|XP_629985.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
gi|60463390|gb|EAL61578.1| ribonucleotide reductase-related [Dictyostelium discoideum AX4]
Length = 257
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 128/174 (73%), Gaps = 4/174 (2%)
Query: 27 IWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVLENLAGR 85
IW+MYKK A+ W EE++ S D WE LT DE+ F ++VLAFF AS GI+ +NL R
Sbjct: 87 IWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-NR 145
Query: 86 FMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKAT 145
FM++VQ+ EA+ FY +QI I+ +HSE YSLL+ET IKD + K++LF+AIET+PCV KKA
Sbjct: 146 FMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKAE 205
Query: 146 WALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 199
WAL WI+ E+F +RL+A E IFFSGSF I LKKR LM GLTFSNELI+
Sbjct: 206 WALKWIN--ESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257
>gi|444917549|ref|ZP_21237644.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Cystobacter fuscus DSM 2262]
gi|444710890|gb|ELW51851.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Cystobacter fuscus DSM 2262]
Length = 353
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/311 (36%), Positives = 166/311 (53%), Gaps = 21/311 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P+QYP +EMY+ A + WT EEVD S D+ + ++A ++H + ++AFFA D IV
Sbjct: 34 PMQYPAFFEMYRNAIKNTWTVEEVDFSTDVGDLRSKMSAADRHLIQRLVAFFATGDSIVS 93
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL V EAR + Q+ E +H + Y LL+TY+ D E+ + F AI+ +P
Sbjct: 94 NNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAERAKAFAAIDNIPS 153
Query: 140 VAKKATWALNWIDGS------ETFAER------LIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +KA + W+D ET +R LI F AC+EG+FF +F +++L+ RG
Sbjct: 154 IQEKAAFCFKWMDSVHQLDRLETREQRRAFLLNLICFAACIEGLFFFAAFAYVYFLRSRG 213
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTK-------LSEERVKALVKEAVEIEREF 239
L+ GL + RDE H FA + +R + E V +++EAV E F
Sbjct: 214 LLHGLAGGTNWVFRDESAHMAFAFEVVKCVRREEPGLFDAQMERDVVTMMEEAVACELRF 273
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
D L + G++ M QY+E+VAD+ LG L K YG NPF +M+L +Q NFFE
Sbjct: 274 AEDLLGGGVAGLSVNEMRQYLEYVADQRLGMLELPKRYGAKNPFGFMDLQDVQELANFFE 333
Query: 300 KRVGEYQKASV 310
+RV YQ V
Sbjct: 334 RRVSAYQVGVV 344
>gi|291092706|gb|ADD74390.1| ribonucleotide reductase small subunit [uncultured virus]
Length = 181
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 123/175 (70%), Gaps = 2/175 (1%)
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA SDGIV ENL RF V EAR FY FQ A+ENIH+E+YS L++T I + DE
Sbjct: 6 ILAFFAPSDGIVGENLVTRFYEMVVYTEARYFYAFQAAMENIHAEVYSQLIKTLIPNEDE 65
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ +F + T P + +K WA W++ +F ERL+AFA VEG+ FSGSF +IFWLKKR
Sbjct: 66 QRSIFSSFMTTPGITEKTRWAKQWLERENLSFVERLVAFAVVEGLLFSGSFASIFWLKKR 125
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSL-LRTKLSEERVKALVKEAVEIEREF 239
GLM GLTFSNELISRDEGLHCDFACLLY+ + KL + +V+EAV E F
Sbjct: 126 GLMHGLTFSNELISRDEGLHCDFACLLYTKHIVHKLPNNVIYNIVREAVHAESIF 180
>gi|156843271|ref|XP_001644704.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
70294]
gi|156115352|gb|EDO16846.1| hypothetical protein Kpol_1056p47 [Vanderwaltozyma polyspora DSM
70294]
Length = 361
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/290 (37%), Positives = 169/290 (58%), Gaps = 8/290 (2%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTAD-EK 61
S +EP+L N RF + PI++ +++ YKK EA FW AEE+D S D+ +W +D +K
Sbjct: 36 SQSKEPILMENKSRFVLMPIKFHTVYDGYKKREALFWPAEEIDFSHDIINWGKKASDHDK 95
Query: 62 HFVTHVLAFFAASDGIVLEN--LAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
+ LAF +S VL + L +EVQ+ EA+ FYGF+I +ENIH E+YSL ++
Sbjct: 96 SIIKKSLAFLCSS---VLGSFYLPEHISSEVQIPEAKCFYGFEIMVENIHGEVYSLAIDQ 152
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCA 178
+ ++DE ++F ++ + +K ++A W D S FAE+L+AF+ +E IF SF +
Sbjct: 153 LVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDKESSLFAEKLVAFSSIEAIFSLVSFFS 212
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
I L+K+ ++PGL +LI +D +HCDF +YS L+ +L ++ +V EAVEIE E
Sbjct: 213 IMSLEKKDIIPGLISGIKLILKDHIVHCDFQMSIYSELKKRLDPGIIERIVTEAVEIELE 272
Query: 239 FV-CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWME 287
+ D L + IE+V DR+L G K + ANP+D +E
Sbjct: 273 TLEDDYFNKQLDKETKADIKNVIEYVGDRVLMGFGNQKHFHSANPYDNLE 322
>gi|355717374|gb|AES05912.1| ribonucleotide reductase M2 B [Mustela putorius furo]
Length = 142
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/146 (65%), Positives = 113/146 (77%), Gaps = 4/146 (2%)
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
KKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +
Sbjct: 1 KKRGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTE 60
Query: 243 ALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRV 302
ALP L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV
Sbjct: 61 ALPVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRV 120
Query: 303 GEYQKASVMSSLNGNGGNHVFKIDED 328
EYQ+ +VM+ N VF +D D
Sbjct: 121 AEYQRFAVMAETTDN----VFTLDAD 142
>gi|269865675|ref|XP_002652006.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220063328|gb|EED42049.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 183
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 115/157 (73%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL R+ +FPIQYP+IWE YK E++FWT EEVD++ D H+ LT +E+ F+ +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I+D +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIA 163
+ LF+AIE +P + KKA WA WI +F R +A
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWIASDTSFDTRCVA 182
>gi|426334717|ref|XP_004028887.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2 [Gorilla
gorilla gorilla]
Length = 315
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 107/126 (84%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEK 127
KD E+
Sbjct: 185 KDPKER 190
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 94/127 (74%), Gaps = 4/127 (3%)
Query: 203 GLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
GLHCDFACL++ L K SEERV+ ++ AV IE+EF+ +ALP L+GMN LM QYIEF
Sbjct: 193 GLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFLTEALPVKLIGMNCTLMKQYIEF 252
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHV 322
VADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEKRVGEYQ+ VMSS N
Sbjct: 253 VADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEKRVGEYQRMGVMSSPTENS---- 308
Query: 323 FKIDEDF 329
F +D DF
Sbjct: 309 FTLDADF 315
>gi|442322490|ref|YP_007362511.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
stipitatus DSM 14675]
gi|441490132|gb|AGC46827.1| ribonucleoside-diphosphate reductase subunit beta [Myxococcus
stipitatus DSM 14675]
Length = 336
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 173/317 (54%), Gaps = 23/317 (7%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P+ YP +EMY+ A + WT EEVD S DL + +T E+H + ++AFFA D IV
Sbjct: 13 PMAYPAFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRLVAFFATGDSIVG 72
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TY+ D E+ + F AI+ +P
Sbjct: 73 NNLVLNLYKHINAPEARMYLSRQLFEEALHVQFYLTLLDTYVPDPAERAKAFAAIDNIPS 132
Query: 140 VAKKATWALNW------IDGSETFAER------LIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ +KA + + W +D +T ER LI FA C+EG+FF +F +++L+ +G
Sbjct: 133 IQRKARFCMKWMDSIHDVDALKTKDERRRFLLNLICFAGCIEGLFFFAAFAYVYFLRSKG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFA--CLLYS------LLRTKLSEERVKALVKEAVEIERE 238
L+ GL + RDE H FA C+ + L K+ E V+A+++EAVE E +
Sbjct: 193 LLNGLAAGTNWVFRDESAHMGFAFECIQVARKEEPDLFDAKM-ERDVEAMMREAVECETQ 251
Query: 239 FVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF 298
F D L + G++ + M Y+E+VAD+ L LG ++ NP +M+L +Q TNFF
Sbjct: 252 FAQDLLSGGVAGLSVQEMRGYLEYVADQRLQMLGIPAVFKTKNPLSFMDLQDVQELTNFF 311
Query: 299 EKRVGEYQKASVMSSLN 315
E+RV YQ A + + N
Sbjct: 312 ERRVSAYQVAVGVGAAN 328
>gi|410927806|ref|XP_003977331.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like,
partial [Takifugu rubripes]
Length = 179
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 106/125 (84%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+DL+HWE+L +E++F++H
Sbjct: 47 EPLLKENPRRFVIFPIKYQDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKDEERYFISH 106
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E
Sbjct: 107 VLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPSE 166
Query: 127 KNRLF 131
+ +F
Sbjct: 167 RWGIF 171
>gi|254521240|ref|ZP_05133295.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
gi|219718831|gb|EED37356.1| ribonucleoside-diphosphate reductase, beta subunit
[Stenotrophomonas sp. SKA14]
Length = 339
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 173/327 (52%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTAD 59
M P++ LL P + + P++YPQ ++MY+ A + WT EE++ D+ + ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPG 59
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDG------SETFAERL------IAF-AC 166
Y+ D +E+ + F A+E + + KKA + WID ET AER I F AC
Sbjct: 120 YLPDPEERVKAFAAVENIDSIKKKADFCFKWIDSIQDLKRIETRAERRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE---- 222
+EG+FF +F +++ + RGL+PGL + RDE H +FA ++R + +
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDD 239
Query: 223 ---ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGV 279
++V ++ EA+E E +F D L + G++ M QY++ AD+ LG K Y V
Sbjct: 240 EMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYNV 299
Query: 280 ANPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+RV YQ
Sbjct: 300 RNPLPFMELQDVQELTNFFERRVSAYQ 326
>gi|320107274|ref|YP_004182864.1| ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
gi|319925795|gb|ADV82870.1| Ribonucleoside-diphosphate reductase [Terriglobus saanensis SP1PR4]
Length = 346
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 165/309 (53%), Gaps = 21/309 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAASDGIVL 79
P++YPQ ++M++ + WT EEVD DL + LT E H + ++AFFA D IV
Sbjct: 27 PMRYPQFYDMFRDGIKNTWTVEEVDFQTDLVDLKQRLTPAEIHTIQRLVAFFATGDSIVS 86
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+ YI + +E+N F A+E +P
Sbjct: 87 NNLVLNLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDNYIPEPEERNAAFAAVENIPS 146
Query: 140 VAKKATWALNWIDGSE------------TFAERLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
++KKA + + W+D + F LI F AC+EG+FF +F +++ + +G
Sbjct: 147 ISKKADFCMKWMDSIQQLDQLETKEHRRQFLLNLICFAACIEGLFFFAAFAYVYFFRSKG 206
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREF 239
L+ GL + RDE H +FA + ++R + E +V +++EA++ E +F
Sbjct: 207 LLHGLASGTNWVFRDESAHLEFAFEVVQVVRAQEPDLWDTELERQVVVMMEEAIDAEAQF 266
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
D L + G++ M QY+ +VAD L LG G + NPF +MEL +Q TNFFE
Sbjct: 267 AEDLLSGGVAGLSVRDMRQYLGYVADSRLERLGIGAHFNAKNPFSFMELQDVQELTNFFE 326
Query: 300 KRVGEYQKA 308
+RV YQ A
Sbjct: 327 RRVSAYQTA 335
>gi|344205623|ref|YP_004790764.1| ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
JV3]
gi|343776985|gb|AEM49538.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
JV3]
Length = 339
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 173/327 (52%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTAD 59
M P++ LL P + + P++YPQ ++MY+ A + WT EE++ D+ + ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPG 59
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDG------SETFAERL------IAF-AC 166
Y+ D +E+ + F A+E + + KKA + WID ET A+R I F AC
Sbjct: 120 YLPDPEERAKAFSAVENIDSIKKKADFCFKWIDSIQDLTRIETRAQRRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE---- 222
+EG+FF +F +++ + RGL+PGL + RDE H +FA ++R + +
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDD 239
Query: 223 ---ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGV 279
++V ++ EA+E E +F D L + G++ M QY++ AD+ LG K Y V
Sbjct: 240 EMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYNV 299
Query: 280 ANPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+RV YQ
Sbjct: 300 RNPLPFMELQDVQELTNFFERRVSAYQ 326
>gi|310823070|ref|YP_003955428.1| ribonucleoside-diphosphate reductase subunit beta [Stigmatella
aurantiaca DW4/3-1]
gi|309396142|gb|ADO73601.1| Ribonucleoside-diphosphate reductase, beta subunit [Stigmatella
aurantiaca DW4/3-1]
Length = 336
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 168/319 (52%), Gaps = 27/319 (8%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P+ YP +EMY+ A + WT EEVD S DL + +T E+H + ++AFFA D IV
Sbjct: 13 PMAYPVFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRLVAFFATGDSIVG 72
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TY+ D ++ + F AI+ +P
Sbjct: 73 NNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPADRAKAFAAIDNIPS 132
Query: 140 VAKKATWALNWIDGSETFAE------------RLIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ +KA + L W+D A+ LI FA C+EG+FF +F +++L+ +G
Sbjct: 133 IQRKARFCLKWMDSIHDLAQLKTREDRRRFLLNLICFAGCIEGLFFFAAFAYVYFLRSKG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RVKALVKEAVEIE 236
L+ GL + RDE H FA + +R EE V A+++EAVE E
Sbjct: 193 LLHGLAAGTNWVFRDESTHMAFA---FEAIRVARQEEPDLFDARMQADVVAMMREAVECE 249
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
F D L + G++ + M QY+E+VAD+ L LG ++ V N +M+L +Q TN
Sbjct: 250 TLFAQDLLSGGVAGLSVQEMRQYLEYVADQRLTMLGLAPVFRVKNSLPFMDLQDVQELTN 309
Query: 297 FFEKRVGEYQKASVMSSLN 315
FFE+RV YQ A + + N
Sbjct: 310 FFERRVSAYQVAVGVGAAN 328
>gi|90018206|gb|ABD83916.1| ribonucleotide reductase M2 polypeptide [Ictalurus punctatus]
Length = 139
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAI 179
IKD E+ LF+A+ET+PCV KKA WALNWI + F ER++AFA VEGIFFSGSF +I
Sbjct: 1 IKDPKEREFLFNAVETLPCVKKKADWALNWIGNKDAQFGERVVAFAAVEGIFFSGSFASI 60
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE VK+++ AV+IE+EF
Sbjct: 61 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVNKPSEATVKSIIVNAVQIEQEF 120
Query: 240 VCDALPCALVGMNGELMSQ 258
+ ALP L+GMN +LM Q
Sbjct: 121 LTQALPVKLIGMNCDLMKQ 139
>gi|323304329|gb|EGA58102.1| Rnr2p [Saccharomyces cerevisiae FostersB]
Length = 229
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSETF 157
E LF+AI T+P + +KA WAL WI ++ F
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADAF 227
>gi|207345015|gb|EDZ71971.1| YGR180Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 224
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 140/210 (66%), Gaps = 4/210 (1%)
Query: 105 IENIHSEMYSLLLETYIKDSDEKN-RLFHAIETVPCVAKKATWALNWIDGSET-FAERLI 162
+ENI+SE+YS++++ + KD KN LF I +P V K + WI ++ +AERL+
Sbjct: 2 MENIYSEVYSMMVDAFFKDP--KNIPLFKEIANLPEVKHKTAFIERWISNDDSLYAERLV 59
Query: 163 AFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE 222
AFA EGIF +G++ ++FWL + +MPGL +N I RD G + DF+CLL++ LRTK +
Sbjct: 60 AFAAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNP 119
Query: 223 ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANP 282
+ ++ ++ EAVEIE+E+ ++LP GM+ + + YIEFVAD LL G K Y NP
Sbjct: 120 KIIEKIITEAVEIEKEYYSNSLPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNP 179
Query: 283 FDWMELISLQGKTNFFEKRVGEYQKASVMS 312
F++ME ++ GKT FFEK+V +YQKAS MS
Sbjct: 180 FEFMEDVATAGKTTFFEKKVSDYQKASDMS 209
>gi|190572323|ref|YP_001970168.1| ribonucleotide diphosphate reductase small subunit
[Stenotrophomonas maltophilia K279a]
gi|408825288|ref|ZP_11210178.1| ribonucleoside-diphosphate reductase [Pseudomonas geniculata N1]
gi|424666640|ref|ZP_18103666.1| hypothetical protein A1OC_00193 [Stenotrophomonas maltophilia
Ab55555]
gi|190010245|emb|CAQ43853.1| putative ribonucleotide diphosphate reductase, small chain
[Stenotrophomonas maltophilia K279a]
gi|401070086|gb|EJP78604.1| hypothetical protein A1OC_00193 [Stenotrophomonas maltophilia
Ab55555]
gi|456737526|gb|EMF62221.1| Ribonucleotide reductase of class Ia (aerobic), beta subunit
[Stenotrophomonas maltophilia EPM1]
Length = 339
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/327 (32%), Positives = 171/327 (52%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTAD 59
M P++ LL P + + P++YPQ ++MY+ A + WT EE++ D+ + ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPG 59
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET------------FAERLIAF-AC 166
Y+ D +E+ + F A+E + + KKA + WID ++ F I F AC
Sbjct: 120 YLPDPEERAKAFSAVENIDSIKKKADFCFKWIDSIQSLTRIETREQRRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE---- 222
+EG+FF +F +++ + RGL+PGL + RDE H +FA ++R + +
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDE 239
Query: 223 ---ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGV 279
++V ++ EA+E E +F D L + G++ M QY++ AD+ LG K Y V
Sbjct: 240 EMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYNV 299
Query: 280 ANPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+RV YQ
Sbjct: 300 RNPLPFMELQDVQELTNFFERRVSAYQ 326
>gi|386716674|ref|YP_006183000.1| ribonucleotide reductase of class Ia (aerobic),beta subunit
[Stenotrophomonas maltophilia D457]
gi|384076236|emb|CCH10817.1| Ribonucleotide reductase of class Ia (aerobic),beta subunit
[Stenotrophomonas maltophilia D457]
Length = 339
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 172/327 (52%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTAD 59
M P++ LL P + + P++YPQ ++MY+ A + WT EE++ D+ + ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDITDLHSKMSPG 59
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDG------SETFAERL------IAF-AC 166
Y+ D +E+ + F A+E + + KKA + WID ET +R I F AC
Sbjct: 120 YLPDPEERAKAFSAVENIDSIKKKADFCFKWIDSIQDLTRIETREQRRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE---- 222
+EG+FF +F +++ + RGL+PGL + RDE H +FA ++R + +
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLPGLASGTNWVFRDESAHMEFAFESVRVVREEEPDLFDD 239
Query: 223 ---ERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGV 279
++V ++ EA+E E +F D L + G++ M QY++ AD+ LG K Y V
Sbjct: 240 EMKQQVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADQHFAKLGMEKKYNV 299
Query: 280 ANPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+RV YQ
Sbjct: 300 RNPLPFMELQDVQELTNFFERRVSAYQ 326
>gi|393225089|gb|EJD33222.1| ferritin-like protein [Auricularia delicata TFB-10046 SS5]
Length = 381
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 165/307 (53%), Gaps = 12/307 (3%)
Query: 17 FCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVTHVLAFFAASD 75
C PI Y Q+W +YKKA AS+W + VD D+ + +L EK + +++A A++
Sbjct: 51 LCPNPIPYSQLWSIYKKAAASYWVVDYVDPRPDVYDYRRSLNIIEKDIIVYLIALLASTK 110
Query: 76 GIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIE 135
G+ ++A F ++ E + F+G Q+A+EN H + S L ++KDSDE+ ++F +
Sbjct: 111 GVHSTSIARYFTGGPELMETKYFFGIQMAMENTHLDCCSRFLWAFVKDSDEREQVFDVLS 170
Query: 136 TVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFS 194
+P V + W WID +++ + RL+AFAC + + + G+F + W++ R L+P L
Sbjct: 171 ELPYVQNRTAWTKRWIDDTQSPYHVRLVAFACSQVLPYCGTFAILLWMEDRELLPSLARC 230
Query: 195 NELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGE 254
N L++ D G + L LL+ + + + + +A EIE+ F+ +LP + +G+ +
Sbjct: 231 NRLMAGDAGTLIRYVRELLPLLKKQPCQHIAEDAIVDAAEIEKRFLTLSLPISYIGLEEK 290
Query: 255 LMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFF----------EKRVGE 304
++ YIE ADRLL LGY K Y NPF + + LQ +FF RVG
Sbjct: 291 DIALYIEHTADRLLECLGYQKKYKSPNPFPFAQFEPLQSNCDFFALQSPSQLGDTDRVGP 350
Query: 305 YQKASVM 311
SV+
Sbjct: 351 PPTKSVL 357
>gi|383454419|ref|YP_005368408.1| ribonucleoside-diphosphate reductase subunit beta [Corallococcus
coralloides DSM 2259]
gi|380733637|gb|AFE09639.1| ribonucleoside-diphosphate reductase subunit beta [Corallococcus
coralloides DSM 2259]
Length = 336
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 165/310 (53%), Gaps = 27/310 (8%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P+ YP +EMY+ A + WT EEVD S DL + +T E+H + ++AFFA D IV
Sbjct: 13 PMAYPVFFEMYRNAIKNTWTVEEVDFSTDLVDLRSKMTDAERHLIHRLVAFFATGDSIVG 72
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TY+ D E+ + F A++ +P
Sbjct: 73 NNLVLNLYKHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPAERAKAFAAVDNIPS 132
Query: 140 VAKKATWALNWIDGSET------------FAERLIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ +KA + + W+D + F LI FA C+EG+FF +F +++L+ +G
Sbjct: 133 IQRKARFCMKWMDSIQALDQVRSKSDRRQFLLNLICFAGCIEGLFFFAAFAYVYFLRSKG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEE----------RVKALVKEAVEIE 236
L+ GL + RDE H FA + ++T EE V ++++AVE E
Sbjct: 193 LLNGLAAGTNWVFRDESAHMAFA---FEAIKTARKEEPDLFDAGLEKDVVQMMRDAVECE 249
Query: 237 REFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTN 296
+F D L ++G++ + M Y+E+VAD+ L LG ++ NP +M+L +Q TN
Sbjct: 250 TQFAQDLLSGGVMGLSVQEMRGYLEYVADQRLQMLGMAPIFHTKNPLHFMDLQDVQELTN 309
Query: 297 FFEKRVGEYQ 306
FFE+RV YQ
Sbjct: 310 FFERRVSSYQ 319
>gi|269867180|ref|XP_002652512.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
gi|220062330|gb|EED41544.1| ribonucleoside-diphosphate reductase small chain [Enterocytozoon
bieneusi H348]
Length = 196
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/145 (60%), Positives = 110/145 (75%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLL R+ +FPIQYP+IWE YK E++FWT EEVD++ D H+ LT +E+ F+ +
Sbjct: 26 EPLLDEAKKRYVIFPIQYPEIWEFYKMHESTFWTVEEVDMTFDCEHFSTLTPNEQFFIKY 85
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF +EVQ+ EA+ FYGFQIAIENIHSEMYS L+ET I+D +E
Sbjct: 86 VLAFFAASDGIVNENLVERFSSEVQILEAKMFYGFQIAIENIHSEMYSKLIETLIRDKEE 145
Query: 127 KNRLFHAIETVPCVAKKATWALNWI 151
+ LF+AIE +P + KKA WA WI
Sbjct: 146 QTYLFNAIENIPSIRKKALWAQKWI 170
>gi|194363985|ref|YP_002026595.1| ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
gi|194346789|gb|ACF49912.1| Ribonucleoside-diphosphate reductase [Stenotrophomonas maltophilia
R551-3]
Length = 339
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 171/327 (52%), Gaps = 22/327 (6%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTAD 59
M P++ LL P + + P++YPQ ++MY+ A + WT EE++ D+ + ++
Sbjct: 1 MADKPKQMLLDPGFE-LTLRPMRYPQFYDMYRNAIKNTWTVEEINFQIDISDLHSKMSPG 59
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+H + ++AFFA D IV NL + EAR + Q+ E +H + Y LL+
Sbjct: 60 ERHLIHRLVAFFATGDSIVSNNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDN 119
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDG------SETFAERL------IAF-AC 166
Y+ D DE+ + F A+E + + KKA + WID ET ER I F AC
Sbjct: 120 YLPDPDERVKAFAAVENIDSIKKKADFCFKWIDSIQNLKRIETREERRQFLLNQICFAAC 179
Query: 167 VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTK---LSEE 223
+EG+FF +F +++ + RGL+ GL + RDE H DFA ++R + L ++
Sbjct: 180 IEGLFFFAAFAYVYYFRSRGLLNGLASGTNWVFRDESAHMDFAFECVDVIREEEPDLFDD 239
Query: 224 RVKA----LVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGV 279
++K ++ EA+E E +F D L + G++ M QY++ AD LG + Y V
Sbjct: 240 KMKQDVYDMLAEAIECEVQFAEDVLSGGVAGISTRDMRQYLQHCADNHFHRLGMERKYNV 299
Query: 280 ANPFDWMELISLQGKTNFFEKRVGEYQ 306
NP +MEL +Q TNFFE+R YQ
Sbjct: 300 RNPLSFMELQDVQELTNFFERRASAYQ 326
>gi|149916691|ref|ZP_01905193.1| putative ribonucleoside-diphosphate reductase beta chain
[Plesiocystis pacifica SIR-1]
gi|149822408|gb|EDM81797.1| putative ribonucleoside-diphosphate reductase beta chain
[Plesiocystis pacifica SIR-1]
Length = 356
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 165/330 (50%), Gaps = 31/330 (9%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAASDGIVL 79
P+ YP + Y++A + WT EEVD S DLR E + E+H + ++AFFA D IV
Sbjct: 37 PMAYPDFYAQYRQAIRNTWTVEEVDFSTDLRDLAERMGPAERHLIQRLVAFFATGDSIVA 96
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+TY+ D D+++ F A+ET+P
Sbjct: 97 NNLVLSLYRHLNAPEARMYLSRQLYEEALHVQFYLTLLDTYVPDPDQRHAAFAAVETIPS 156
Query: 140 VAKKATWALNW---------IDGS---ETFAERLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
+ +KA + L W +DG F LI F AC EG+FF G+F +++L+ RG
Sbjct: 157 IRRKAEFCLRWQDTVAAIPRLDGPAHRRQFLLNLICFAACTEGLFFYGAFAYVYFLRSRG 216
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREF 239
L+ GL + RDE H FA + ++R + E V +++EAV E F
Sbjct: 217 LLHGLAAGTNWVFRDESAHMAFAFSVIDVVRDQEPELFDAELEAAVVEMIEEAVACEVAF 276
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
D L + G+ + Y+E+ AD+ L LG YG NP +MEL + NFFE
Sbjct: 277 AEDLLGLGVAGLTVADLRAYLEYCADQRLQRLGMATRYGSTNPLSFMELQDIPELANFFE 336
Query: 300 KRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+RV YQ +G + +D DF
Sbjct: 337 RRVSAYQ----------HGVSGTIDLDADF 356
>gi|432884081|ref|XP_004074433.1| PREDICTED: ribonucleoside-diphosphate reductase subunit M2-like
[Oryzias latipes]
Length = 279
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 102/125 (81%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EPLL NP RF +FPIQYP IW+MYK+A+ASFWT EEVDLS+DL HW+ L DEKHF++
Sbjct: 34 DEPLLRENPRRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLVHWDRLKPDEKHFIS 93
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+VLAFFAASDGIV ENL RF EVQV EAR+FY FQI IE +HSEMYSLL+ TYI+D
Sbjct: 94 NVLAFFAASDGIVNENLVQRFSLEVQVPEARSFYSFQILIETVHSEMYSLLINTYIRDLK 153
Query: 126 EKNRL 130
E++ L
Sbjct: 154 ERSGL 158
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 100/139 (71%), Gaps = 7/139 (5%)
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
T+ +L R GLHC+FACLLYS L K SE+RV+ ++ +AV IE+EF+ +ALP L+GM
Sbjct: 147 TYIRDLKERS-GLHCNFACLLYSYLVKKPSEDRVRGIITKAVCIEQEFLTEALPVDLIGM 205
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N LM QYIEFVADRLL L K+Y V NPFD+ME ISL+GKTNFFEKRV EYQ+ VM
Sbjct: 206 NCCLMKQYIEFVADRLLADLDLDKVYKVENPFDFMESISLEGKTNFFEKRVAEYQRFGVM 265
Query: 312 SS-LNGNGGNHVFKIDEDF 329
S+ L+G F +D DF
Sbjct: 266 SNMLDGE-----FTLDADF 279
>gi|393224234|gb|EJD32719.1| ribonucleotide reductase [Auricularia delicata TFB-10046 SS5]
Length = 270
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 149/264 (56%), Gaps = 2/264 (0%)
Query: 39 WTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARA 97
W V+ D R W E L+ E+ + ++L AAS + ENLA F + V++ EAR
Sbjct: 3 WATSGVEPVGDCRDWDENLSDGERDLLAYLLVSVAASKAVDFENLASHFASCVRMEEARC 62
Query: 98 FYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET- 156
FYG Q+A H E +S +IK + + F+AI VP V +KA W + W+D +
Sbjct: 63 FYGLQLASAGAHMETFSRFARAFIKGAASRAFYFNAIANVPFVRRKAQWVMRWVDAQDPP 122
Query: 157 FAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLL 216
F RL+AF + IF+SG+F + W +RG++P L ++EL++RDE + DFAC L LL
Sbjct: 123 FRVRLVAFLAAKAIFYSGTFFCLSWFDERGILPALCHASELVARDESVGIDFACRLLRLL 182
Query: 217 RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKL 276
+ V+ +V +AV IE+EF+ + + + + + M Y+E+VADRLL A+GY
Sbjct: 183 GVRPCHHVVRRIVLDAVNIEKEFLKELVGASGFAFDADRMGLYVEYVADRLLEAMGYQAE 242
Query: 277 YGVANPFDWMELISLQGKTNFFEK 300
+ NP+ + L L+G FFE+
Sbjct: 243 FSTPNPWTFGSLRPLRGSAGFFER 266
>gi|168702494|ref|ZP_02734771.1| ribonucleoside-diphosphate reductase, beta subunit [Gemmata
obscuriglobus UQM 2246]
Length = 332
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 163/307 (53%), Gaps = 21/307 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVL 79
P++YP +EMYK A + WT +EVD S DL +T E+H + ++AFFA D IV
Sbjct: 13 PMRYPPFFEMYKDAIKNTWTVDEVDFSTDLADLRGRVTPAERHLIHRLVAFFATGDSIVG 72
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL V EAR + Q+ E +H + Y LL+ Y+ D + F A++ +P
Sbjct: 73 NNLVLNLYKHVNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPDMAAREAAFAAVDNIPS 132
Query: 140 VAKKATWALNWIDGSE------TFAER------LIAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ KA + WID E T A R L+ FA C+EG+FF +F +++L+ +G
Sbjct: 133 IKLKADFCFKWIDSIEGLDRLETRAHRRAFLLNLVCFAACIEGLFFFAAFAYVYFLRSKG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREF 239
L+ GL + RDE H FA + +R + E ++ A+++EAVE E F
Sbjct: 193 LLHGLATGTNWVFRDESAHMAFAFRVIDTVRREEPDLFDAELEAQIVAMLREAVECETAF 252
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
D L + G++ + Y+E+VADR L +LG ++G NPF +M+L +Q TNFFE
Sbjct: 253 ARDVLGQGVAGLSLADLRSYLEYVADRRLESLGIAPVFGAKNPFGFMDLQDVQELTNFFE 312
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 313 RRVSAYQ 319
>gi|225873704|ref|YP_002755163.1| ribonucleoside-diphosphate reductase subunit beta [Acidobacterium
capsulatum ATCC 51196]
gi|225791613|gb|ACO31703.1| ribonucleoside-diphosphate reductase, beta subunit [Acidobacterium
capsulatum ATCC 51196]
Length = 340
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 164/309 (53%), Gaps = 21/309 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAASDGIVL 79
P++YP ++M++ + WT EEVD DL + L+ E H + ++AFFA D IV
Sbjct: 21 PMRYPVFYDMFRDGIKNTWTVEEVDFQTDLVDLKQRLSPAEVHLIQRLVAFFATGDSIVS 80
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+ Y+ D + + F A+E +P
Sbjct: 81 NNLVLNLYKHINSPEARLYLSRQLYEEAVHVQFYLTLLDNYVPDPEARAAAFAAVENIPS 140
Query: 140 VAKKATWALNWIDGSETFAE------------RLIAF-ACVEGIFFSGSFCAIFWLKKRG 186
++KKA + + W+D + E LI F AC+EG+FF +F +++L+ +G
Sbjct: 141 ISKKADFCMKWMDSIQQLDELKTREHRRQFLLNLICFAACIEGLFFFAAFAYVYFLRSKG 200
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLS-------EERVKALVKEAVEIEREF 239
L+ GL + RDE H +FA + +++R++ E + ++ EAV+ E +F
Sbjct: 201 LLHGLASGTNWVFRDESCHLEFAFEVVNVVRSQEPDLWDAQLEADIVEMLHEAVDAETQF 260
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
D L + G++ M QY+ +VAD L LG +GV NPF +MEL +Q TNFFE
Sbjct: 261 AEDLLSGGVAGLSVRDMRQYLGYVADSRLQRLGIAPAFGVKNPFSFMELQDVQELTNFFE 320
Query: 300 KRVGEYQKA 308
+RV YQ A
Sbjct: 321 RRVSAYQTA 329
>gi|388498368|gb|AFK37250.1| unknown [Lotus japonicus]
Length = 119
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/109 (82%), Positives = 98/109 (89%), Gaps = 3/109 (2%)
Query: 221 SEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVA 280
+E+ V+A+ + E EFVCDALPCALVGMNG+LMSQYIEFVADRLLGALG GK+YGV
Sbjct: 14 AEDSVRAVWTDG---EAEFVCDALPCALVGMNGDLMSQYIEFVADRLLGALGCGKVYGVQ 70
Query: 281 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGG HVFK+DEDF
Sbjct: 71 NPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGAHVFKMDEDF 119
>gi|327409820|ref|YP_004347240.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
gi|326784994|gb|AEA07128.1| ribonucleoside-diphosphate reductase small chain [Lausannevirus]
Length = 319
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 162/307 (52%), Gaps = 16/307 (5%)
Query: 31 YKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEV 90
Y+K + S W EEVD S+D + W+ L+ +EK F +LAFFA DG+V+ENL F EV
Sbjct: 21 YQKLKKSHWIPEEVDTSKDAQDWQLLSKEEKSFAKLILAFFAQFDGLVVENLVRHFQQEV 80
Query: 91 Q--VAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWAL 148
E FY Q A E IH+E Y L+ + S ++ + AI + K A W
Sbjct: 81 SSFAKEIEWFYILQAANELIHNETYMNLINVLLPPS-KRAKALDAISNYASIRKIADWVE 139
Query: 149 NWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
W++ + ER+IAFA +EG+ F+G+F A+++ + GL +NE ISRDE LH F
Sbjct: 140 KWMNPAVPLPERIIAFAALEGVIFTGAFAAVYYFTISNRLKGLRTANEWISRDEALHKKF 199
Query: 209 ACLLYSLLRTKL------SEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEF 262
A +LY+ L +L S+ER ++ A+E +F+ +L V ++ + M Y++
Sbjct: 200 AEVLYNFLVDELKVFERVSQERCHEILTSAIEAVTDFIKYSLRLDNVNIDADRMLGYMKR 259
Query: 263 VADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVMSSLNGNGGNHV 322
D L L Y K+Y N D+M LI L+ K NFFE + +Y K M G+G
Sbjct: 260 AVDDLATGLKYEKVYNAENTLDYMLLIGLENKGNFFEGVITDYSKGMDM----GDGS--- 312
Query: 323 FKIDEDF 329
F DF
Sbjct: 313 FNTKADF 319
>gi|357415820|ref|YP_004928840.1| ribonucleoside-diphosphate reductase [Pseudoxanthomonas spadix
BD-a59]
gi|355333398|gb|AER54799.1| Ribonucleoside-diphosphate reductase [Pseudoxanthomonas spadix
BD-a59]
Length = 332
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 163/307 (53%), Gaps = 21/307 (6%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAASDGIVL 79
P++YPQ ++MY+ A + WT EE++ D+ + +T ++H + ++AFFA D IV
Sbjct: 13 PMRYPQFYDMYRDAIRNSWTVEEINFQIDIADLHDKMTPADRHLIHRLVAFFATGDSIVS 72
Query: 80 ENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPC 139
NL + EAR + Q+ E +H + Y LL+ Y+ + E+++ F A++ +
Sbjct: 73 NNLVLNLYQHLNAPEARMYLSRQLYEEALHVQFYLTLLDNYLPEPGERSKAFAAVDNIAS 132
Query: 140 VAKKATWALNWIDGS------ETFAERL------IAFA-CVEGIFFSGSFCAIFWLKKRG 186
+ KA + W+D ET A R I FA C+EG+FF +F +++ + RG
Sbjct: 133 IRNKAGFCFKWMDSLQDLGRLETRAHRRQFLLNQICFATCIEGLFFFAAFAYVYYFRSRG 192
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLR-------TKLSEERVKALVKEAVEIEREF 239
L+PGL + RDE H FA ++R + +++V+A+++EA+E E +F
Sbjct: 193 LLPGLASGTNWVFRDESCHMAFAFESVRVVREEEPDLFDEQMQQQVQAMLEEAIECELQF 252
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
D L + G++ M QY++ AD LG + Y V NP +MEL +Q TNFFE
Sbjct: 253 AEDVLSGGVAGISSRDMRQYLQHCADNHFARLGMERKYNVRNPLPFMELQDVQELTNFFE 312
Query: 300 KRVGEYQ 306
+RV YQ
Sbjct: 313 RRVSSYQ 319
>gi|356532684|ref|XP_003534901.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase small chain A-like [Glycine max]
Length = 248
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 146/284 (51%), Gaps = 80/284 (28%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L RFCMFPI Y QI WE E T
Sbjct: 20 QEPILMEQSQRFCMFPICYKQI-------------------------WEMYKKVEASLWT 54
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+ SD + + G F F+G E + +MYSLLLETYIKDS
Sbjct: 55 N------CSDNSI--EVYGPF-----------FFG---QCEPLF-KMYSLLLETYIKDSR 91
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK +LF+AIET+PCVAKKA WA +WI +FCAIFWLKK+
Sbjct: 92 EKYKLFNAIETLPCVAKKAEWAFSWIH----------------------NFCAIFWLKKK 129
Query: 186 GLMPGLTFSNELISRDEGLHCDFACL------LYSLLRTKLSEERVKALVKEAVEIEREF 239
GLMP LTF NELI RDEGL+CDFACL Y+LL+ LS V LV +A+ I+ +F
Sbjct: 130 GLMPVLTFLNELIFRDEGLYCDFACLSQCIVIAYNLLQNPLSSYEVHKLVPQAIXIQTKF 189
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLL----GALGYGKLYGV 279
VCD LPCAL+GMN LMSQ+I+ V LL G L + GV
Sbjct: 190 VCDVLPCALIGMNSALMSQHIKVVVYMLLVLKDGLLNEATVLGV 233
>gi|448931799|gb|AGE55360.1| ribonucleoside-diphosphate reductase small subunit [Paramecium
bursaria Chlorella virus MA-1E]
Length = 137
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 105/142 (73%), Gaps = 5/142 (3%)
Query: 188 MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCA 247
MPGL SNE ISRDEGLH F L+YS L+ KL E VK ++ EAVE E+EF+CDA+PC
Sbjct: 1 MPGLGLSNEFISRDEGLHQQFGELMYSKLQNKLPFETVKQIITEAVENEKEFICDAIPCR 60
Query: 248 LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQK 307
L+GMN +LM QYIEFVADR+ ALGY K+Y NPF +MELISLQGKTNFFEKRV +YQ+
Sbjct: 61 LIGMNADLMGQYIEFVADRIFVALGYEKVYNSKNPFAFMELISLQGKTNFFEKRVSDYQR 120
Query: 308 ASVMSSLNGNGGNHVFKIDEDF 329
VM +++F ID+DF
Sbjct: 121 PGVMKP-----EDNIFAIDDDF 137
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,169,002,258
Number of Sequences: 23463169
Number of extensions: 206429727
Number of successful extensions: 576774
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2446
Number of HSP's successfully gapped in prelim test: 1770
Number of HSP's that attempted gapping in prelim test: 566494
Number of HSP's gapped (non-prelim): 4749
length of query: 329
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 187
effective length of database: 9,027,425,369
effective search space: 1688128544003
effective search space used: 1688128544003
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 77 (34.3 bits)