BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040427
(329 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49730|RIR2_TOBAC Ribonucleoside-diphosphate reductase small chain OS=Nicotiana
tabacum PE=2 SV=1
Length = 329
Score = 612 bits (1578), Expect = e-174, Method: Compositional matrix adjust.
Identities = 292/329 (88%), Positives = 305/329 (92%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE 60
MP IPEEPLLA +PDRFCMFPIQYPQIWEMYKKA ASFWTAEEVDLS D RHWE LT E
Sbjct: 1 MPLIPEEPLLASSPDRFCMFPIQYPQIWEMYKKALASFWTAEEVDLSSDTRHWETLTPGE 60
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+HF+THVLAFFAASDGIVLENLAGRFM EVQVAEARAFYGFQIAIENIHSEMYSLLLE+Y
Sbjct: 61 RHFITHVLAFFAASDGIVLENLAGRFMKEVQVAEARAFYGFQIAIENIHSEMYSLLLESY 120
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF 180
IKDSDEK+RLF A+ET PCV KKA WAL WIDGSETFAERL+AFACVEGIFFSGSFCAIF
Sbjct: 121 IKDSDEKSRLFRAVETNPCVEKKAKWALRWIDGSETFAERLVAFACVEGIFFSGSFCAIF 180
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKL+EERVK +V +AVEIEREFV
Sbjct: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLTEERVKGIVADAVEIEREFV 240
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
CDALPCALVGMNG+LMS+YIEFVADRLL ALGY KLY NPFDWMELISLQGKTNFFEK
Sbjct: 241 CDALPCALVGMNGDLMSKYIEFVADRLLDALGYDKLYNAQNPFDWMELISLQGKTNFFEK 300
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQKASVMSSLNGNG H FK+DEDF
Sbjct: 301 RVGEYQKASVMSSLNGNGATHEFKLDEDF 329
>sp|Q6Y657|RIR2B_ARATH Putative ribonucleoside-diphosphate reductase small chain B
OS=Arabidopsis thaliana GN=RNR2B PE=5 SV=1
Length = 333
Score = 584 bits (1506), Expect = e-166, Method: Compositional matrix adjust.
Identities = 274/333 (82%), Positives = 308/333 (92%), Gaps = 4/333 (1%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
MPS+PEEP+L P PDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQD R WE +LT D
Sbjct: 1 MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTND 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+ HVLAFFAASDGIVLENL+ RFM++VQ++EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD+ E++ LF AIET+PCV KKA WA+ WI+GS++FAER++AFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVTKKAEWAMKWINGSQSFAERIVAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACL+YSLLRTKL E+R+KA+V +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLIYSLLRTKLDEDRLKAIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN ELMSQYIEFVADRLL ALG K+YGV+NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRELMSQYIEFVADRLLAALGCAKVYGVSNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG---NHVFKIDEDF 329
KRVGEYQKAS+MSS++GN +HVFK+DEDF
Sbjct: 301 KRVGEYQKASIMSSVHGNAAFNDDHVFKLDEDF 333
>sp|Q9LSD0|RIR2C_ARATH Ribonucleoside-diphosphate reductase small chain C OS=Arabidopsis
thaliana GN=TSO2 PE=2 SV=1
Length = 332
Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 283/332 (85%), Positives = 309/332 (93%), Gaps = 3/332 (0%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
MPS+PEEPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE +L
Sbjct: 1 MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+ HVLAFFAASDGIVLENLA RFM++VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD+ E++ LF AIET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+TKLSEERVK++V +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN +LMSQYIEFVADRLLGALGYGK+YGV NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG--NHVFKIDEDF 329
KRVG+YQKASVMSS+NGNG NHVF +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332
>sp|P50651|RIR2A_ARATH Ribonucleoside-diphosphate reductase small chain A OS=Arabidopsis
thaliana GN=RNR2A PE=1 SV=2
Length = 341
Score = 515 bits (1326), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/324 (75%), Positives = 273/324 (84%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++ WEALT EKHF++
Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS
Sbjct: 78 HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L E+V +V EAVEIE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADRLL LG + Y NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341
>sp|Q4KLN6|RIR2_RAT Ribonucleoside-diphosphate reductase subunit M2 OS=Rattus
norvegicus GN=Rrm2 PE=2 SV=1
Length = 390
Score = 478 bits (1229), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/329 (69%), Positives = 267/329 (81%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ +V IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>sp|P79733|RIR2_DANRE Ribonucleoside-diphosphate reductase subunit M2 OS=Danio rerio
GN=rrm2 PE=1 SV=1
Length = 386
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 229/328 (69%), Positives = 267/328 (81%), Gaps = 5/328 (1%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++
Sbjct: 63 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
DS E+ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEE VK ++ AVEIE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 302
Query: 242 DALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN +LM QYIEFVADRLL LG+ K+Y V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 363 VGEYQRMGVMSGTTDN----TFTLDADF 386
>sp|P11157|RIR2_MOUSE Ribonucleoside-diphosphate reductase subunit M2 OS=Mus musculus
GN=Rrm2 PE=1 SV=1
Length = 390
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/329 (68%), Positives = 266/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K +E+RV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS N + F +D DF
Sbjct: 366 RVGEYQRMGVMS----NSTENSFTLDADF 390
>sp|P07201|RIR2_SPISO Ribonucleoside-diphosphate reductase small chain OS=Spisula
solidissima PE=2 SV=2
Length = 384
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 227/324 (70%), Positives = 266/324 (82%), Gaps = 2/324 (0%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLLA NP RF + PIQY IW+MYKKAEASFWTAEEVDLS+D+ HWE+L +EKHF++H
Sbjct: 62 EPLLADNPRRFVVLPIQYHDIWKMYKKAEASFWTAEEVDLSKDMAHWESLKKEEKHFISH 121
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKD E
Sbjct: 122 VLAFFAASDGIVNENLVERFSKEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDPQE 181
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
++ LF+AIET+PCV +KA WA+ WI D S ++AER++AFA VEGIFFSGSF +IFWLKKR
Sbjct: 182 RDFLFNAIETMPCVKEKADWAMRWINDDSSSYAERVVAFAAVEGIFFSGSFASIFWLKKR 241
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
G+MPGLTFSNELISRDEGLHCDFACL++S L K S+ER+ ++ EAV+IE+ F+ +ALP
Sbjct: 242 GIMPGLTFSNELISRDEGLHCDFACLMFSHLVNKPSQERIHQIIDEAVKIEQVFLTEALP 301
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN +LM QYIEFVADRLL L KLY NPFD+ME ISL+GKTNFFEKRVGEY
Sbjct: 302 CRLIGMNCDLMRQYIEFVADRLLLELKCDKLYNKENPFDFMEHISLEGKTNFFEKRVGEY 361
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK VMS N G +H F +D DF
Sbjct: 362 QKMGVMSGGN-TGDSHAFTLDADF 384
>sp|Q60561|RIR2_MESAU Ribonucleoside-diphosphate reductase subunit M2 OS=Mesocricetus
auratus GN=RRM2 PE=2 SV=1
Length = 386
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 226/329 (68%), Positives = 266/329 (80%), Gaps = 9/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS + F +D DF
Sbjct: 366 RVGEYQRMGVMS--------NSFTLDADF 386
>sp|O57175|RIR2_VACCA Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Ankara) GN=MVA032L PE=2 SV=1
Length = 319
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>sp|P11158|RIR2_VACCW Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Western Reserve) GN=VACWR043 PE=2 SV=1
Length = 319
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>sp|P20493|RIR2_VACCC Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain Copenhagen) GN=F4L PE=2 SV=1
Length = 319
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 226/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYYDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>sp|P29883|RIR2_VACCP Ribonucleoside-diphosphate reductase small chain OS=Vaccinia virus
(strain L-IVP) GN=F14 PE=2 SV=1
Length = 319
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/323 (69%), Positives = 262/323 (81%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LAPNP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W +T DEK+F+ H
Sbjct: 2 EPILAPNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKVTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF TEVQ+ EAR FYGF++AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCTEVQITEARCFYGFRMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSEETVRSIITDAVSIEQEFLTAALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M YIEFVADRL+ LG+ K+Y V NPFD+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYIEFVADRLISELGFKKIYNVTNPFDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQKD----NH-FSLDVDF 319
>sp|O15910|RIR2_TRYBB Ribonucleoside-diphosphate reductase small chain OS=Trypanosoma
brucei brucei GN=RNR2 PE=2 SV=1
Length = 337
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 256/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NPDR+ +FPI+YP IW+ YK+AE+S WT EE+DL D+ WE L E+HF+
Sbjct: 16 EEPLLTENPDRYVIFPIKYPDIWQKYKEAESSIWTVEEIDLGNDMTDWEKLDDGERHFIK 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIVLENLA RFM EVQV E R FYGFQIA+ENIHSE YS+L++TY+ D D
Sbjct: 76 HVLAFFAASDGIVLENLAERFMCEVQVPEVRCFYGFQIAMENIHSETYSVLIDTYVVDPD 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI T+PC+ KKA WA+ WI +F RL+AFA VEGIFFSGSFCAIFWLKKR
Sbjct: 136 EKQRLLHAIRTIPCIEKKAKWAIEWIGSQTSFPTRLVAFAAVEGIFFSGSFCAIFWLKKR 195
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY + KL +RV ++ AV IEREF+CDAL
Sbjct: 196 GLMPGLTFSNELISRDEGLHTDFACLLYEKYIVNKLPRDRVLEIICNAVSIEREFICDAL 255
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN +LM+QYIEFVADRLL +LGY + Y NPFD+M++ISLQGKTNFFEK+VGE
Sbjct: 256 PVRLIGMNSQLMTQYIEFVADRLLVSLGYDRHYNSKNPFDFMDMISLQGKTNFFEKKVGE 315
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMSS + VF +D DF
Sbjct: 316 YQKAGVMSS---ERSSKVFSLDADF 337
>sp|P31350|RIR2_HUMAN Ribonucleoside-diphosphate reductase subunit M2 OS=Homo sapiens
GN=RRM2 PE=1 SV=1
Length = 389
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>sp|Q4R7Q7|RIR2_MACFA Ribonucleoside-diphosphate reductase subunit M2 OS=Macaca
fascicularis GN=RRM2 PE=2 SV=1
Length = 389
Score = 463 bits (1191), Expect = e-130, Method: Compositional matrix adjust.
Identities = 222/329 (67%), Positives = 265/329 (80%), Gaps = 5/329 (1%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI D T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV +E+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADRL+ LG+ K++ V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>sp|P33799|RIR2_VAR67 Ribonucleoside-diphosphate reductase small chain OS=Variola virus
(isolate Human/India/Ind3/1967) GN=C8L PE=2 SV=1
Length = 319
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/323 (68%), Positives = 259/323 (80%), Gaps = 5/323 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+LA NP+RF +FPIQY IW MYKKAEASFWT EEVD+S+D+ W LT DEK+F+ H
Sbjct: 2 EPILAKNPNRFVIFPIQYHDIWNMYKKAEASFWTVEEVDISKDINDWNKLTPDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV ENLA RF EVQ+ EAR FYGFQ+AIENIHSEMYSLL++TY+KDS+E
Sbjct: 62 VLAFFAASDGIVNENLAERFCIEVQITEARCFYGFQMAIENIHSEMYSLLIDTYVKDSNE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
KN LF+AIET+PCV KKA WA WI S + ERLIAFA VEGIFFSGSF +IFWLKKRG
Sbjct: 122 KNYLFNAIETMPCVKKKADWAQKWIHDSAGYGERLIAFAAVEGIFFSGSFASIFWLKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L SEE V++++ +AV IE+EF+ ALP
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLYPPSEETVRSIITDAVSIEQEFLTVALPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN E+M Y+EFVADRL+ LG+ ++Y V NP D+ME ISL+GKTNFFEKRVGEYQ
Sbjct: 242 KLIGMNCEMMKTYMEFVADRLISELGFKRIYNVTNPSDFMENISLEGKTNFFEKRVGEYQ 301
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K VMS + NH F +D DF
Sbjct: 302 KMGVMSQED----NH-FSLDVDF 319
>sp|Q6PEE3|RIR2B_MOUSE Ribonucleoside-diphosphate reductase subunit M2 B OS=Mus musculus
GN=Rrm2b PE=1 SV=1
Length = 351
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLLG LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>sp|Q4R741|RIR2B_MACFA Ribonucleoside-diphosphate reductase subunit M2 B OS=Macaca
fascicularis GN=RRM2B PE=2 SV=1
Length = 351
Score = 454 bits (1168), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>sp|Q7LG56|RIR2B_HUMAN Ribonucleoside-diphosphate reductase subunit M2 B OS=Homo sapiens
GN=RRM2B PE=1 SV=1
Length = 351
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>sp|Q5R9G0|RIR2B_PONAB Ribonucleoside-diphosphate reductase subunit M2 B OS=Pongo abelii
GN=RRM2B PE=2 SV=1
Length = 351
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 219/325 (67%), Positives = 260/325 (80%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADRLL LG+ K++ NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>sp|Q9C167|RIR2_NEUCR Ribonucleoside-diphosphate reductase small chain OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=rnr-2 PE=3 SV=2
Length = 410
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 222/341 (65%), Positives = 265/341 (77%), Gaps = 15/341 (4%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADE 60
P EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE
Sbjct: 72 PEEANEPLLTENPQRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNDDE 131
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
K F++H+LAFFAASDGIV ENL RF EVQ+ EAR FYGFQI +ENIHSE YSLL++TY
Sbjct: 132 KFFISHILAFFAASDGIVNENLVERFSGEVQIPEARCFYGFQIMMENIHSETYSLLIDTY 191
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAI 179
IK+ ++ LF+AI+T+PC+ KKA WAL WI D S TFA+RL+AFA VEGIFFSG+F +I
Sbjct: 192 IKEPSQRTYLFNAIDTIPCIRKKADWALRWITDKSSTFAQRLVAFAAVEGIFFSGAFASI 251
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ ++ ++ +AV IE+EF
Sbjct: 252 FWLKKRGLMPGLTFSNELISRDEGLHTDFACLLFSHLNNRPSKQLIQEIIVDAVRIEQEF 311
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFE 299
+ +ALPCAL+GMN +LM QYIEFVADRLL ALG K+Y NPFD+ME ISL GKTNFFE
Sbjct: 312 LTEALPCALLGMNADLMKQYIEFVADRLLVALGNEKIYRSTNPFDFMENISLGGKTNFFE 371
Query: 300 KRVGEYQKASVMSSL-----------NGNGGNHVFKIDEDF 329
KRVG+YQKA VM+S N NGG+ F DEDF
Sbjct: 372 KRVGDYQKAGVMNSTKKADADAEVAKNENGGDFTF--DEDF 410
>sp|P48592|RIR2_DROME Ribonucleoside-diphosphate reductase subunit M2 OS=Drosophila
melanogaster GN=RnrS PE=1 SV=2
Length = 393
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/329 (65%), Positives = 260/329 (79%), Gaps = 7/329 (2%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D ++ LF+AIET+P V +KA WAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ ++++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN +LMSQYIEFVADRLL LG GK+Y NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQ+ V+S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVVS----NPLDNVFTLDADF 393
>sp|O46310|RIR2_LEIAM Ribonucleoside-diphosphate reductase small subunit OS=Leishmania
amazonensis PE=3 SV=1
Length = 345
Score = 450 bits (1158), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/325 (66%), Positives = 254/325 (78%), Gaps = 4/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPL NP R+ +FPIQY IW YK+ E+ WT EE+DL D++ W L E+HF+
Sbjct: 24 EEPLQQENPFRYVLFPIQYHDIWRKYKEQESCIWTVEEIDLGNDMKDWATLNDGERHFIK 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFA SDGIV+ENLA RFM++V+V EARAFYGFQ+ +ENIHSE YS+LL+TYI DS+
Sbjct: 84 HVLAFFAGSDGIVIENLAQRFMSDVKVPEARAFYGFQLMMENIHSETYSVLLDTYITDSE 143
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK RL HAI+T+PC+ KKA W + WI S +F +RLI FA VEGIFFSGSFCA+FWLKKR
Sbjct: 144 EKLRLLHAIQTIPCIQKKAEWPVRWIGSSASFQQRLIGFAAVEGIFFSGSFCALFWLKKR 203
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLY-SLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
GLMPGLTFSNELISRDEGLH DFACLLY S ++ KL ERV ++ +AV IEREF+CDAL
Sbjct: 204 GLMPGLTFSNELISRDEGLHTDFACLLYNSHIKHKLPRERVLEIIVDAVNIEREFICDAL 263
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN ELM+QYIEFVADRLL +LG K Y PFD+ME+ISLQGKTNFFEKRVGE
Sbjct: 264 PVRLIGMNAELMAQYIEFVADRLLVSLGEEKHYRSTQPFDFMEMISLQGKTNFFEKRVGE 323
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQKA VMS+ G + F + EDF
Sbjct: 324 YQKAGVMST---EGTSKKFSLSEDF 345
>sp|P42521|RIR2_DICDI Ribonucleoside-diphosphate reductase small subunit OS=Dictyostelium
discoideum GN=rnrB-1 PE=2 SV=2
Length = 338
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 212/327 (64%), Positives = 260/327 (79%), Gaps = 4/327 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI+YP IW MYKKA AS W AEE+DL D WE LT +E+HF++
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA RFM+EVQ+ EAR FYGFQIAIENIHSE YSLL+ETYIKD
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K++LF+AIET+PC+ KKA WAL WI+ S++FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLM GLTFSNELISRDEGLHCDFACLLY+ L+ KL + ++ ++++AVE E+EF+C++LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN MSQYIEF ADRL+ +LGY K++ +NPF+WME+ISLQ K+NFFE +V EY
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEY 311
Query: 306 QKASV---MSSLNGNGGNHVFKIDEDF 329
K V ++ N + +DEDF
Sbjct: 312 AKTGVAIQGNNQQKNNQSRTLVLDEDF 338
>sp|P50650|RIR2_PLAF4 Ribonucleoside-diphosphate reductase small chain OS=Plasmodium
falciparum (isolate Dd2) GN=RNR2 PE=2 SV=1
Length = 349
Score = 443 bits (1139), Expect = e-123, Method: Compositional matrix adjust.
Identities = 202/306 (66%), Positives = 245/306 (80%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL E+ ++ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQIIQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMS 312
K+ VM+
Sbjct: 331 KSGVMA 336
>sp|P50649|RIR2_PLAFG Ribonucleoside-diphosphate reductase small subunit OS=Plasmodium
falciparum (isolate FCR-3 / Gambia) GN=RNR2 PE=3 SV=1
Length = 322
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 248/323 (76%), Gaps = 6/323 (1%)
Query: 9 LLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVL 68
+L DRF ++PI YP ++ YKKAEA FWTAEE+D S DL+ +E L +EKHF+ HVL
Sbjct: 4 ILNKESDRFTLYPILYPDVFPFYKKAEACFWTAEEIDYSSDLKDFEKLNENEKHFIKHVL 63
Query: 69 AFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKN 128
AFFAASDGIVLENLA F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E+
Sbjct: 64 AFFAASDGIVLENLAVSFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKERL 123
Query: 129 RLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLM 188
LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+ +
Sbjct: 124 NLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQNKL 183
Query: 189 PGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEA--VEIEREFVCDALPC 246
GLTFSNELISRDEGLH DF CL+YSLL KL E+ V+ +VKEA VE+E+ F+C++LPC
Sbjct: 184 HGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAGGVEVEKSFICESLPC 243
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADRLL LG K++ NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 244 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 303
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ +HVF ++ +F
Sbjct: 304 KSGVMAQ----RKDHVFCLNTEF 322
>sp|Q9DHU2|RIR2_YLDV Ribonucleoside-diphosphate reductase small chain OS=Yaba-like
disease virus GN=20L PE=3 SV=1
Length = 325
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/324 (64%), Positives = 251/324 (77%), Gaps = 5/324 (1%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L P +++ +FPI Y IW+MYKKA ASFWT EEVDLS+D W L+ +EK+F+ H
Sbjct: 6 EPILKPTLNKYVVFPIVYEDIWKMYKKAVASFWTVEEVDLSKDFSDWLKLSDNEKNFIKH 65
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENLA RF +EVQ++EAR FYGFQIA+ENIHSEMYSLL++TYI DS E
Sbjct: 66 ILAFFAASDGIVNENLAERFYSEVQISEARCFYGFQIAMENIHSEMYSLLIDTYILDSKE 125
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN LF+AIE + CV +KA WA WI+ + T+ ERL+AFA VEGIFFSGSF AIFW+KKR
Sbjct: 126 KNYLFNAIENMNCVKQKANWAKKWIESKNRTYGERLVAFAAVEGIFFSGSFAAIFWIKKR 185
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFAC+++ L V+ ++ EAV IE+ F+ +A+P
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACIMFKHLLNPPLNSVVRDIIIEAVNIEKNFLTEAIP 245
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN +LM QYIEFVADRLL LG K Y NPFD+ME ISL+GKTNFFEKRV EY
Sbjct: 246 VKLIGMNCDLMKQYIEFVADRLLLELGCDKYYCSKNPFDFMENISLEGKTNFFEKRVSEY 305
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QK SVMS N ++VF +D DF
Sbjct: 306 QKMSVMS----NKKDNVFSLDIDF 325
>sp|P36603|RIR2_SCHPO Ribonucleoside-diphosphate reductase small chain
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=suc22 PE=3 SV=2
Length = 391
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 210/327 (64%), Positives = 253/327 (77%), Gaps = 3/327 (0%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+E +L PNP RF +FPI+Y +IW+ YKKAEASFWTAEE+DLS+DL W+ L ADE++F+
Sbjct: 65 DEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFI 124
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLA+FAASDGIV ENL RF +EVQ+ EAR YGFQI IENIHSE YSLLL+TYI++
Sbjct: 125 STVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREP 184
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F AI T+ + KA WAL WI D T+A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 185 KEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLK 244
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACL++S L+ + + V+A++ EAV+IE+E+ DA
Sbjct: 245 KRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIEKEYFTDA 304
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADRLL ALG K Y V NPFD+ME ISL GKTNFFEK+V
Sbjct: 305 LPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVS 364
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQ A VMS + +H F IDEDF
Sbjct: 365 DYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>sp|P42170|RIR2_CAEEL Ribonucleoside-diphosphate reductase small chain OS=Caenorhabditis
elegans GN=rnr-2 PE=3 SV=1
Length = 381
Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 247/325 (76%), Gaps = 5/325 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L +RF +FP+++ IW YKKA ASFWT EEVDL +D+ WE + DE++F++
Sbjct: 61 DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFIS 120
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+LAFFAASDGIV ENL RF EVQV+EAR FYGFQIAIENIHSEMYS L+ETYI+D
Sbjct: 121 RILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDET 180
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N LF+A++ + KKA WAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 181 ERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKK 240
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLT SNELISRDEGLH DFACLLYS L+ KL+++R+ ++K+AV IE+EF+ +AL
Sbjct: 241 RGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYDIIKDAVAIEQEFLTEAL 300
Query: 245 PCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGE 304
P ++GMN LMSQYIEFVAD LL LG KLY NPFD+ME IS+ GKTNFFEKRV E
Sbjct: 301 PVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFMENISIDGKTNFFEKRVSE 360
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VM N F ++ DF
Sbjct: 361 YQRPGVMV----NEAERQFDLEADF 381
>sp|Q8SRR2|RIR2_ENCCU Ribonucleoside-diphosphate reductase small chain OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU06_0730 PE=3 SV=1
Length = 325
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/324 (63%), Positives = 250/324 (77%), Gaps = 7/324 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL P +RF + PI+Y IW+MYKKAE+SFWT EEV L +D+ W L A E+HF+++
Sbjct: 8 ELLLDPKEERFVLLPIKYHDIWKMYKKAESSFWTVEEVSLDKDIDDWGKLNAKERHFISY 67
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIV NL RF TEV+V EAR FYGFQ+AIENIHSEMYSLL++TYI+D+DE
Sbjct: 68 VLAFFAASDGIVNLNLVERFSTEVKVLEARFFYGFQMAIENIHSEMYSLLIDTYIRDNDE 127
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
KN LF AI T+P V +KA WA+ WI D + FA RL+AFACVEGIFFSG+F +IFWLKKR
Sbjct: 128 KNFLFDAIRTIPSVKEKADWAIRWIEDKNSDFATRLVAFACVEGIFFSGAFASIFWLKKR 187
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHC+FACLL+ L+ K + R+K +V +AVEIE++F+ ++LP
Sbjct: 188 GLMPGLTFSNELISRDEGLHCEFACLLHYHLKKKCN--RIKEVVMDAVEIEKKFLSESLP 245
Query: 246 CALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN LM +YIEFVADRLL LG ++Y NPFD+ME ISL GKTNFF+KR +Y
Sbjct: 246 VNLIGMNCNLMCRYIEFVADRLLENLGEERVYNATNPFDFMENISLVGKTNFFDKRESQY 305
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKA V GN F+ID DF
Sbjct: 306 QKAFV----GIENGNDSFRIDVDF 325
>sp|P09938|RIR2_YEAST Ribonucleoside-diphosphate reductase small chain 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RNR2 PE=1
SV=2
Length = 399
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/327 (62%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADRLL A G K Y V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S G F +EDF
Sbjct: 375 DYQKAGVMSKSTKQEAG--AFTFNEDF 399
>sp|P32209|RIR2_SWPVK Ribonucleoside-diphosphate reductase small chain OS=Swinepox virus
(strain Kasza) GN=C14L PE=3 SV=1
Length = 274
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/269 (64%), Positives = 215/269 (79%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EP+L + RF +FPI+Y IW+MYK++ ASFWT EEVDLS+DL W+ LT DEK+F+ H
Sbjct: 2 EPILQESDSRFVIFPIKYHDIWKMYKQSVASFWTVEEVDLSKDLDDWDKLTKDEKYFIKH 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFA+SDGIV ENLA RF +VQ +EAR FYGFQIA+ENIHSEMYSLL++TY++D+ E
Sbjct: 62 ILAFFASSDGIVNENLAERFYVDVQCSEARCFYGFQIAMENIHSEMYSLLIDTYVRDNIE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
K LF+AIET+ CV KKA WA WI ++ + ER++AFA VEGIFFSGSF AIFW+KKRG
Sbjct: 122 KMHLFNAIETMECVKKKADWARKWISSNKVYGERVVAFAAVEGIFFSGSFAAIFWIKKRG 181
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
LMPGLTFSNELISRDEGLHCDFACL++ L S+E + +++ +AV IE+EF+ A+P
Sbjct: 182 LMPGLTFSNELISRDEGLHCDFACLMFKHLLHPPSKEVITSIIIDAVNIEKEFLTVAIPV 241
Query: 247 ALVGMNGELMSQYIEFVADRLLGALGYGK 275
L+GMN LMSQYIEFVADRLL LG K
Sbjct: 242 DLIGMNCCLMSQYIEFVADRLLTELGCEK 270
>sp|Q9QTF2|RIR2_RSIV Ribonucleoside-diphosphate reductase small chain OS=Red sea bream
iridovirus GN=RR-2 PE=3 SV=1
Length = 312
Score = 347 bits (891), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 170/301 (56%), Positives = 219/301 (72%), Gaps = 5/301 (1%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW-EALTADEKHFVTHVLAFFAA 73
DR+ + P P +W MYKKA ASFWT EEVDLS D+RHW + LT E+ F++H+LAFFA
Sbjct: 2 DRYVLRP-NDPHLWAMYKKAVASFWTVEEVDLSTDVRHWTDKLTEAERRFMSHILAFFAM 60
Query: 74 SDGIVLENLAGRFMTEV-QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFH 132
+DGIV +NL F E+ + EARAFYGFQ+AIENIH+EMY+ L+ T + ++ LF
Sbjct: 61 ADGIVGDNLVCNFAKELDHIPEARAFYGFQVAIENIHAEMYTQLIITLVAKENQA-ALFS 119
Query: 133 AIETVPCVAKKATWALNWIDGS-ETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGL 191
A E +PCV KA WA W++ + + A RL+AFA VEG+ FSGSF AIFWLKKR LMPGL
Sbjct: 120 AAEDMPCVKAKAQWAAQWLNATHKPIATRLLAFAAVEGVMFSGSFAAIFWLKKRSLMPGL 179
Query: 192 TFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGM 251
FSNELISRDEGLHCDFAC+L+ + K ++ ++ +AV+IE F +AL L+GM
Sbjct: 180 AFSNELISRDEGLHCDFACMLFRQMANKPCQDDAHQIISDAVDIETAFFREALKTPLLGM 239
Query: 252 NGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
N + M YI+FVADRLL ALGY K+Y V+NPFD+M+ IS++GKTNFFE+RV EYQ+ V
Sbjct: 240 NSDSMKLYIQFVADRLLDALGYAKMYNVSNPFDFMDNISIEGKTNFFERRVSEYQRMGVF 299
Query: 312 S 312
+
Sbjct: 300 T 300
>sp|Q7T6Y9|RIR2_MIMIV Ribonucleoside-diphosphate reductase small chain OS=Acanthamoeba
polyphaga mimivirus GN=RNR2 PE=3 SV=2
Length = 417
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 3/310 (0%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKH 62
I +EP+L+ +++ + PI+Y ++W+ YK ++WT EEVDL++D+ W L+ D+++
Sbjct: 96 IMKEPILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRN 155
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F+ HVLAFFAA+DGIV N+ + V++ EA YGFQ A+EN H EMYSL+L T++K
Sbjct: 156 FIMHVLAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVK 215
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWL 182
D +N+L ++I+T+P + KKA W WI +T+A +L+AF+ VEG+FFSGSF +IFWL
Sbjct: 216 DDALRNKLINSIKTMPSIKKKADWCNKWIKSDKTYAHKLVAFSIVEGVFFSGSFASIFWL 275
Query: 183 KKRGL--MPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
K R + MPGL SN+ I+RDE H + AC++YSLL +L E V ++ EA+EIE EF+
Sbjct: 276 KTREMHVMPGLIISNQFIARDENKHVELACIMYSLLNNRLKESVVYQIIDEAIEIEEEFI 335
Query: 241 CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK 300
D+LPC L+GMN ELMSQYI++VADRLL LGY K + V NPF++M+ I + K NFFEK
Sbjct: 336 NDSLPCKLLGMNSELMSQYIKYVADRLLVDLGYRKKFNVDNPFEYMKKIDVFVKANFFEK 395
Query: 301 RVGEYQKASV 310
R Y A++
Sbjct: 396 RNDAYSNANI 405
>sp|P49723|RIR4_YEAST Ribonucleoside-diphosphate reductase small chain 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RNR4 PE=1
SV=1
Length = 345
Score = 288 bits (736), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 208/309 (67%), Gaps = 4/309 (1%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K ++
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + KD
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 142
Query: 126 EKN-RLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
KN LF I +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 -KNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLT 201
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+ +MPGL +N I RD G + DF+CLL++ LRTK + + ++ ++ EAVEIE+E+ ++
Sbjct: 202 DKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNS 261
Query: 244 LPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEKRVG 303
LP GM+ + + YIEFVAD LL G K Y NPF++ME ++ GKT FFEK+V
Sbjct: 262 LPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVS 321
Query: 304 EYQKASVMS 312
+YQKAS MS
Sbjct: 322 DYQKASDMS 330
>sp|P0C8I1|RIR2_ASFP4 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Tick/South Africa/Pretoriuskop
Pr4/1996) GN=Pret-056 PE=3 SV=1
Length = 327
Score = 254 bits (649), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIENSHRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKSQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D ++ + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EER + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEERIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>sp|P0C8I2|RIR2_ASFWA Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Warthog/Namibia/Wart80/1980)
GN=War-054 PE=3 SV=1
Length = 327
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 182/307 (59%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D ++ + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPTKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>sp|P26713|RIR2_ASFM2 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Tick/Malawi/Lil 20-1/1983)
GN=Mal-052 PE=3 SV=1
Length = 327
Score = 253 bits (647), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIENSQRFTIFPIQHPECWNWYKKLESMTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIKKMAQWVRQWMDPARNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 242 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYNVGNPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>sp|P42492|RIR2_ASFB7 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (strain Badajoz 1971 Vero-adapted)
GN=Ba71V-044 PE=3 SV=1
Length = 334
Score = 253 bits (646), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 135/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL N RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 9 EELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 68
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 69 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 128
Query: 127 KNRLFHAIETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D T ERL+ FA VEGI F F AI +LK++
Sbjct: 129 QQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQFLKEQ 188
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 189 NIMPGLVSYNEFISRDEGVHCSFACFLISNYVYNIPEEKIIHKILKEAVELVDEFINYAF 248
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L + +Y V NPF M L KTNFFE
Sbjct: 249 DKARGRVPGFSKEMLFQYIRYFTDNLCFMMQCKSIYKVGNPFPQMTKFFLNEVEKTNFFE 308
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 309 LRPTQYQ 315
>sp|P0C8I0|RIR2_ASFK5 Ribonucleoside-diphosphate reductase small chain OS=African swine
fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-056
PE=3 SV=1
Length = 327
Score = 252 bits (643), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 134/307 (43%), Positives = 180/307 (58%), Gaps = 7/307 (2%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E LL + RF +FPIQ+P+ W YKK E+ WTA+EVD+ +D+ WEA+ ++ F
Sbjct: 2 EELLIEDSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQREFYKQ 61
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFF +D IV+ENL FM E++V E FY Q A E +HSE YS+ ++T I D E
Sbjct: 62 ILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLIPDEKE 121
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+ R+F IE P + K A W W+D + ERL+ FA VEGI F F AI +LK++
Sbjct: 122 QQRIFSGIEKHPIIRKMAQWVQQWMDPVKNSLGERLVGFAAVEGILFQNHFVAIQFLKEQ 181
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEER-VKALVKEAVEIEREFVCDAL 244
+MPGL NE ISRDEG+HC FAC L S + EE+ + ++KEAVE+ EF+ A
Sbjct: 182 NIMPGLVSYNEFISRDEGMHCSFACFLISNYLNNIPEEKIIHKILKEAVELVDEFISYAF 241
Query: 245 PCA---LVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQ--GKTNFFE 299
A + G + E++ QYI + D L L +Y V NPF M L KTNFFE
Sbjct: 242 DKARGSVPGFSKEMLFQYIRYFTDNLCFMLQCKSIYKVENPFPQMTKFFLNEVEKTNFFE 301
Query: 300 KRVGEYQ 306
R +YQ
Sbjct: 302 LRPTQYQ 308
>sp|O84835|RIR2_CHLTR Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
trachomatis (strain D/UW-3/Cx) GN=nrdB PE=1 SV=1
Length = 346
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 152/318 (47%), Gaps = 27/318 (8%)
Query: 19 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA--LTADEKHFVTHVLAFFAASDG 76
+ PI+Y WE Y A+ W E+ + +D+ W++ L+ DE+ + L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEIPMGKDIELWKSDRLSEDERRVILLNLGFFSTAES 90
Query: 77 IVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIET 136
+V N+ V EAR + Q E +H+ + + E+ D E +F+A
Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNE 147
Query: 137 VPCVAKKATWAL-------------NWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWL 182
+ K + + + ++G + F + L+ + + EGIFF F I
Sbjct: 148 RAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSE-------ERVKALVKEAVEI 235
++ M G+ + I RDE +H +F L + ++ + E + + L+K AV++
Sbjct: 208 HRQNKMIGIGEQYQYILRDETIHLNFGIDLINGIKEENPEIWTPELQQEIVELIKRAVDL 267
Query: 236 EREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWM-ELISLQGK 294
E E+ D LP ++G+ + Y++ +ADR L +G +Y NPF WM E I L +
Sbjct: 268 EIEYAQDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNKE 327
Query: 295 TNFFEKRVGEYQKASVMS 312
NFFE RV EYQ A+ ++
Sbjct: 328 KNFFETRVIEYQHAASLT 345
>sp|Q9PL92|RIR2_CHLMU Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=nrdB PE=3 SV=1
Length = 346
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 155/319 (48%), Gaps = 29/319 (9%)
Query: 19 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA--LTADEKHFVTHVLAFFAASDG 76
+ PI+Y WE Y A+ W E+ + +D+ W++ L+ DE+ + L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEISMGKDIELWKSNVLSEDERRVILLNLGFFSTAES 90
Query: 77 IVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIET 136
+V N+ V EAR + Q E +H+ + + E+ D E +F+A
Sbjct: 91 LVGNNIVLAIFKHVTNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEKE---IFNAYNE 147
Query: 137 VPCVAKKATWAL-------------NWIDGSETFAERLIAFACV-EGIFFSGSFCAIFWL 182
+ K + + + ++G + F + L+ + + EGIFF F I
Sbjct: 148 RASIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFIKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR--------TKLSEERVKALVKEAVE 234
++ M G+ + I RDE +H +F L + ++ T+L +E ++ +++ AV+
Sbjct: 208 HRQNKMVGIGEQYQYILRDETIHLNFGVDLINGIKEENPEIWTTELQQEIIE-MIQRAVD 266
Query: 235 IEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWM-ELISLQG 293
+E ++ D LP ++G+ + Y++ +ADR L +G +Y NPF WM E I L
Sbjct: 267 LEIDYARDCLPRGILGLRASMFIDYVQHIADRRLERIGLKPIYHTKNPFPWMSETIDLNK 326
Query: 294 KTNFFEKRVGEYQKASVMS 312
+ NFFE RV EYQ A+ ++
Sbjct: 327 EKNFFETRVTEYQHAASLT 345
>sp|Q9Z6S4|RIR2_CHLPN Ribonucleoside-diphosphate reductase subunit beta OS=Chlamydia
pneumoniae GN=nrdB PE=3 SV=1
Length = 346
Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 154/319 (48%), Gaps = 29/319 (9%)
Query: 19 MFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA--LTADEKHFVTHVLAFFAASDG 76
+ PI+Y WE Y A+ W EV +++D+ W++ L+ DE+ + L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90
Query: 77 IVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIET 136
+V N+ + EAR + Q E +H+ + + E+ D E +F+A
Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNE 147
Query: 137 VPCVAKK----ATWALNWID---------GSETFAERLIAFACV-EGIFFSGSFCAIFWL 182
+ K T ++ +D G F + L+ + + EGIFF F I
Sbjct: 148 RASIRAKDDFQMTLTVDVLDPNFSVQSSEGLGQFIKNLVGYYIIMEGIFFYSGFVMILSF 207
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR--------TKLSEERVKALVKEAVE 234
++ M G+ + I RDE +H +F L + ++ T+L EE V AL+++AVE
Sbjct: 208 HRQNKMTGIGEQYQYILRDETIHLNFGIDLINGIKEENPEVWTTELQEEIV-ALIEKAVE 266
Query: 235 IEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWM-ELISLQG 293
+E E+ D LP ++G+ + Y+ +ADR L +G +Y NPF WM E + L
Sbjct: 267 LEIEYAKDCLPRGILGLRSSMFIDYVRHIADRRLERIGLKPIYHSRNPFPWMSETMDLNK 326
Query: 294 KTNFFEKRVGEYQKASVMS 312
+ NFFE RV EYQ A +S
Sbjct: 327 EKNFFETRVTEYQTAGNLS 345
>sp|Q77MS0|RIR2_GAHVM Ribonucleoside-diphosphate reductase small chain OS=Gallid
herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) GN=MDV053
PE=3 SV=1
Length = 343
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 12/290 (4%)
Query: 25 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIV---LEN 81
P I + + + WT E +S DLR LT +E++F + F +A+D +V ++N
Sbjct: 51 PDIGHLRALSIMNRWTETEFVISDDLRDVSMLTEEERYFYRFLFTFLSAADDLVNLNIDN 110
Query: 82 LAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLL-LETYIKDSDEKNRLFHAIETVPCV 140
L G F + + +Y Q IE +HS YS++ L + DS + P +
Sbjct: 111 LLGLFSQK----DIHHYYFEQECIEAVHSRAYSIIQLMLFDNDSLARAEYVKTSLNSPAI 166
Query: 141 AKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISR 200
K W + + AE+ I +EGIFFS SF AI +L+ L N LISR
Sbjct: 167 QSKLDWLNKRVIECSSIAEKYILMILIEGIFFSASFAAIAYLRINNLFVVTCQINNLISR 226
Query: 201 DEGLHCDFACLLYS--LLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQ 258
DE +H + +C ++ L+ K S RV+ L KEAV+IE F+ A P ++ E +
Sbjct: 227 DEAIHVEASCCIFKNYLMGPKPSIGRVQELFKEAVQIECAFLRTAAPRNSQLLDVEAICS 286
Query: 259 YIEFVADRLLGALGYGKLYGVANPF-DW-MELISLQGKTNFFEKRVGEYQ 306
Y+ + ADRLL L +Y P D+ + L++ TNFFE+R Y
Sbjct: 287 YVRYSADRLLKELDMPPIYNEPKPTADFPLALMTASNNTNFFERRNTAYS 336
>sp|P0C701|RIR2_EBVG Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain GD1) GN=BaRF1 PE=1 SV=1
Length = 302
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 7/272 (2%)
Query: 39 WTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAF 98
W A + L++D + L + F + F A ++ +V N+ +T + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNI-DELVTSFESHDIDHY 83
Query: 99 YGFQIAIENIHSEMYSLLLET-YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETF 157
Y Q A+EN+H E Y+ +L + D N AI + K +W + + + T
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 158 AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 217
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 218 TKLSEER---VKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYG 274
K R ++ L + AVE+E F+ +A + ++ + Q++E ADR+LG +G
Sbjct: 204 AKADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIGQA 262
Query: 275 KLYGVANPFDW-MELISLQGKTNFFEKRVGEY 305
LYG P D + ++ +TNFFE+ +Y
Sbjct: 263 PLYGTPPPKDCPLTYMTSIKQTNFFEQESSDY 294
>sp|P0CAP6|RIR2_EBVB9 Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain B95-8) GN=BaRF1 PE=1 SV=1
Length = 302
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 7/272 (2%)
Query: 39 WTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAF 98
W A + L++D + L + F + F A ++ +V N+ +T + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNI-DELVTSFESHDIDHY 83
Query: 99 YGFQIAIENIHSEMYSLLLET-YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETF 157
Y Q A+EN+H E Y+ +L + D N AI + K +W + + + T
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 158 AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 217
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 218 TKLSEER---VKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYG 274
K R ++ L + AVE+E F+ +A + ++ + Q++E ADR+LG +G
Sbjct: 204 AKADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIGQA 262
Query: 275 KLYGVANPFDW-MELISLQGKTNFFEKRVGEY 305
LYG P D + ++ +TNFFE+ +Y
Sbjct: 263 PLYGTPPPKDCPLTYMTSIKQTNFFEQESSDY 294
>sp|P0CAP7|RIR2_EBVA8 Ribonucleoside-diphosphate reductase small chain OS=Epstein-Barr
virus (strain AG876) GN=BaRF1 PE=3 SV=1
Length = 302
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 7/272 (2%)
Query: 39 WTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAF 98
W A + L++D + L + F + F A ++ +V N+ +T + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNI-DELVTSFESHDIDHY 83
Query: 99 YGFQIAIENIHSEMYSLLLET-YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETF 157
Y Q A+EN+H E Y+ +L + D N AI + K +W + + + T
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 158 AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 217
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 218 TKLSEER---VKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRLLGALGYG 274
K R ++ L + AVE+E F+ +A + ++ + Q++E ADR+LG +G
Sbjct: 204 AKADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIGQA 262
Query: 275 KLYGVANPFDW-MELISLQGKTNFFEKRVGEY 305
LYG P D + ++ +TNFFE+ +Y
Sbjct: 263 PLYGTPPPKDCPLTYMTSIKQTNFFEQESSDY 294
>sp|Q6UDJ1|RIR2_PSHV1 Ribonucleoside-diphosphate reductase small chain OS=Psittacid
herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997)
GN=UL40 PE=3 SV=1
Length = 313
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 147/291 (50%), Gaps = 13/291 (4%)
Query: 25 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAG 84
P + E+ + A+ W E+ ++D + + LT DE F V F AA+D +V NL
Sbjct: 18 PDMRELRDLSIANNWNEFELCYARDEKDVDCLTEDECDFYKFVFCFLAAADDLVNVNL-D 76
Query: 85 RFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVP--CVAK 142
+T + + +Y QI IE +HS YS + + ++ D R + +E V + +
Sbjct: 77 NLVTLFPQKDIQHYYAEQIRIETVHSRTYSAVQLVFFRN-DAIARDRYVLEAVKDGAIRR 135
Query: 143 KATWALNWI--DGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 199
K W L+ I +G E T E+ I +EGIFF SF AI +L++ + SN+LIS
Sbjct: 136 KIDW-LSRIQNEGDELTLPEKYILMILIEGIFFVSSFAAISYLRRHSIFQVTCQSNDLIS 194
Query: 200 RDEGLHCDFACLLYSLL---RTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELM 256
RDE +H +C +Y+ K S +R+ L KEAVEIE +F+ P A ++ + +
Sbjct: 195 RDETIHTTASCCIYNNWLKGHPKPSVKRIHQLFKEAVEIECDFLVARAPKAARLIDIDAI 254
Query: 257 SQYIEFVADRLLGALGYGKLYG--VANPFDWMELISLQGKTNFFEKRVGEY 305
++ F A+R L +G +Y +P + L+SL+ NFFE R Y
Sbjct: 255 QSFVRFTANRWLSMIGVPTIYDDPAPDPTFPLALMSLEKNVNFFEHRSTAY 305
>sp|Q6R7K3|RIR2_OSHVF Ribonucleoside-diphosphate reductase small chain OS=Ostreid
herpesvirus 1 (isolate France) GN=ORF20 PE=3 SV=1
Length = 579
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 143/312 (45%), Gaps = 13/312 (4%)
Query: 15 DRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAAS 74
D + P Y Q+ + K E+S W E+D D+ WE ++ +E+ V VLAFFA
Sbjct: 70 DHALLKPAVYQQLRDFATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVG 129
Query: 75 DGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAI 134
D +V + +A F E + E + F +Q E +H +Y+ L+ +KD L +A
Sbjct: 130 DTLVKDRIAI-FADEFPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAY 188
Query: 135 ---ETVPCVAKKATWALNWID-GSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPG 190
E P + KK W I +++ E ++ C E I F+ SF AI + M
Sbjct: 189 KDPEFAP-IKKKVDWLGKIISVENDSRGEMVVGQVCTEAIMFAASF-AILLKFRAPYMRA 246
Query: 191 LTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPCALVG 250
L NE I RDE LH F L L+ + S+ER+ L+ EA EIE EF +P +
Sbjct: 247 LVLGNEFIRRDETLHFRFYAELLRLMPDRPSDERIAELLTEATEIELEFAEYVVPEGVKY 306
Query: 251 MNGELMSQYIEFVADRLLGALGYGKLY------GVANPFDWMELISLQGKTNFFEKRVGE 304
+ + + Q+++ +++ L +Y + +P +M + + K NFFE + E
Sbjct: 307 ITKDRLIQHVKANTNQVCEMLDINPIYFDQKGNVLLSPLLYMNTLESEQKINFFEGKATE 366
Query: 305 YQKASVMSSLNG 316
Y N
Sbjct: 367 YNTKQYKVDFNN 378
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,996,645
Number of Sequences: 539616
Number of extensions: 4894598
Number of successful extensions: 11265
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 11000
Number of HSP's gapped (non-prelim): 120
length of query: 329
length of database: 191,569,459
effective HSP length: 118
effective length of query: 211
effective length of database: 127,894,771
effective search space: 26985796681
effective search space used: 26985796681
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 61 (28.1 bits)