BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040429
MQRLVHRPWAPREVRIRVLHSLSGSLVKSSARLSKVHKRDEVRERERERRVMAAASFRWI
LQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQNGNSSLLSF
TVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA

High Scoring Gene Products

Symbol, full name Information P value
AT5G41650 protein from Arabidopsis thaliana 1.1e-48
AT1G64185 protein from Arabidopsis thaliana 1.2e-47
GSU_0119
glyoxalase family protein
protein from Geobacter sulfurreducens PCA 5.5e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040429
        (168 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2160517 - symbol:AT5G41650 "AT5G41650" species...   508  1.1e-48   1
TAIR|locus:505006200 - symbol:AT1G64185 "AT1G64185" speci...   498  1.2e-47   1
TIGR_CMR|GSU_0119 - symbol:GSU_0119 "glyoxalase family pr...   105  5.5e-06   1


>TAIR|locus:2160517 [details] [associations]
            symbol:AT5G41650 "AT5G41650" species:3702 "Arabidopsis
            thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008152
            "metabolic process" evidence=ISS] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB005233 GO:GO:0016829
            InterPro:IPR025870 Pfam:PF12681 eggNOG:NOG47168
            HOGENOM:HOG000232015 ProtClustDB:CLSN2686390 EMBL:BT004939
            EMBL:AK118828 IPI:IPI00536593 RefSeq:NP_198980.1 UniGene:At.30217
            ProteinModelPortal:Q9FFR5 SMR:Q9FFR5 STRING:Q9FFR5
            EnsemblPlants:AT5G41650.1 GeneID:834167 KEGG:ath:AT5G41650
            TAIR:At5g41650 InParanoid:Q9FFR5 OMA:RVREPSF PhylomeDB:Q9FFR5
            ArrayExpress:Q9FFR5 Genevestigator:Q9FFR5 Uniprot:Q9FFR5
        Length = 117

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 97/117 (82%), Positives = 108/117 (92%)

Query:    52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVVQ 111
             MA ASFRWILQLH+DVPKAARFY++GLDF+VNV TLRWAEL SGP+KLALMQSPS+HV +
Sbjct:     1 MATASFRWILQLHRDVPKAARFYAQGLDFSVNVVTLRWAELHSGPIKLALMQSPSNHVAE 60

Query:   112 NGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
              G SSLLSFTVTDIN+ VTKLMALGAELDG+IKYEIHGKVAAM+C DG+MLGLYE A
Sbjct:    61 KGYSSLLSFTVTDINTTVTKLMALGAELDGTIKYEIHGKVAAMKCPDGYMLGLYEAA 117


>TAIR|locus:505006200 [details] [associations]
            symbol:AT1G64185 "AT1G64185" species:3702 "Arabidopsis
            thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008152
            "metabolic process" evidence=ISS] EMBL:CP002684
            GenomeReviews:CT485782_GR UniGene:At.43563 UniGene:At.70356
            GO:GO:0016829 InterPro:IPR025870 Pfam:PF12681 EMBL:AY084293
            EMBL:BT025022 IPI:IPI00522041 RefSeq:NP_564827.1
            ProteinModelPortal:Q8LGF9 EnsemblPlants:AT1G64185.1 GeneID:842723
            KEGG:ath:AT1G64185 TAIR:At1g64185 eggNOG:NOG47168
            HOGENOM:HOG000232015 InParanoid:Q8LGF9 OMA:VASVRCL PhylomeDB:Q8LGF9
            ProtClustDB:CLSN2686390 Genevestigator:Q8LGF9 Uniprot:Q8LGF9
        Length = 118

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 93/118 (78%), Positives = 109/118 (92%)

Query:    52 MAAASFRWILQLHKDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPSDHVV- 110
             MA ASFRWILQLH+DVPKAARFY +GLDF+VNV TLRWAELQSGPLKLALMQ+PS+HV+ 
Sbjct:     1 MATASFRWILQLHRDVPKAARFYEKGLDFSVNVVTLRWAELQSGPLKLALMQAPSEHVMS 60

Query:   111 QNGNSSLLSFTVTDINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYEPA 168
             + G SSLLSFTV DIN+ ++KLM LGAELDGSIKYE+HGKVA++RC+DGH+LGLYEP+
Sbjct:    61 EKGYSSLLSFTVADINTTISKLMELGAELDGSIKYEVHGKVASVRCLDGHVLGLYEPS 118


>TIGR_CMR|GSU_0119 [details] [associations]
            symbol:GSU_0119 "glyoxalase family protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003824 "catalytic activity"
            evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0016702
            InterPro:IPR025870 Pfam:PF12681 HOGENOM:HOG000232015
            RefSeq:NP_951181.2 ProteinModelPortal:Q74GX5 GeneID:2685568
            KEGG:gsu:GSU0119 PATRIC:22022984 ProtClustDB:CLSK827648
            BioCyc:GSUL243231:GH27-97-MONOMER Uniprot:Q74GX5
        Length = 116

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 30/103 (29%), Positives = 51/103 (49%)

Query:    65 KDVPKAARFYSEGLDFTVNVCTLRWAELQSGPLKLALMQSPS-DHVVQNGNSSLLSFTVT 123
             +D+  A RFYSE L   +    +   E  SG   L + Q+ + D +V  G  + ++F V 
Sbjct:    13 RDLEAAKRFYSEQLKLPLAQAGMTMMEFFSGGTTLGVAQALTPDALVFVGRHTGITFRVK 72

Query:   124 DINSAVTKLMALGAELDGSIKYEIHGKVAAMRCIDGHMLGLYE 166
             DI+S   +L+  G   D  ++    GK+A +   DG++  L +
Sbjct:    73 DIDSFCKELVQAGVRFDQPLEQSPWGKMAVVSDPDGNLFALVD 115


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.133   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      168       157   0.00079  106 3  11 22  0.45    31
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  144 KB (2088 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.08u 0.08s 14.16t   Elapsed:  00:00:00
  Total cpu time:  14.08u 0.08s 14.16t   Elapsed:  00:00:00
  Start:  Fri May 10 19:08:26 2013   End:  Fri May 10 19:08:26 2013

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