BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040440
(355 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255584563|ref|XP_002533008.1| conserved hypothetical protein [Ricinus communis]
gi|223527219|gb|EEF29383.1| conserved hypothetical protein [Ricinus communis]
Length = 341
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/356 (62%), Positives = 278/356 (78%), Gaps = 16/356 (4%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNP 60
M+S+AKLH HQPL+LSFN +RPSF K I + +RTP SSSPFK I+A +P QNP
Sbjct: 1 MDSIAKLHCTHQPLNLSFNPNRPSFTKPIFSLPIRTP-SSSPFKTLSIKAYKTP---QNP 56
Query: 61 KPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAA-TVESTNEST 119
+PSLLRTL +P+++ T +T+ A A LF H KPAIAAPV A+ VE +S+
Sbjct: 57 EPSLLRTL----NPILRTTCITLTATAALFFFNNLHK-KPAIAAPVTASPPAVEPAEQSS 111
Query: 120 KDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELE 179
+VS++E+E+ +E LA NPNDI+ L++LMEVRIKS+KL++A++V+DRLIELE
Sbjct: 112 PS------NVSFQEQERALEDRLARNPNDIDTLRSLMEVRIKSRKLLQAIEVVDRLIELE 165
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
P+E EW LLK+Q+ SY+G+ E+A KGFEEIL KDPLRVEAYHGLVMA+ S +++V K
Sbjct: 166 PDEDEWPLLKSQIFSYSGDFESARKGFEEILEKDPLRVEAYHGLVMAHAESGDSVDKVLK 225
Query: 240 RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
RIE AM++C+KEKKKSDLRDFKLLIAQI+VME K+ +AL VYEELVKEEPRDFRPYLCQG
Sbjct: 226 RIESAMDKCRKEKKKSDLRDFKLLIAQIRVMEEKYVDALNVYEELVKEEPRDFRPYLCQG 285
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRESMASKS 355
IIYTLLRKK+EAEK+FE+FR+LVP+NHPYRE+F+DNM AT F EKV RE + S
Sbjct: 286 IIYTLLRKKEEAEKKFEQFRKLVPKNHPYREFFLDNMFATTFFSEKVQREGAGASS 341
>gi|224138502|ref|XP_002322830.1| predicted protein [Populus trichocarpa]
gi|222867460|gb|EEF04591.1| predicted protein [Populus trichocarpa]
Length = 340
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/353 (62%), Positives = 269/353 (76%), Gaps = 19/353 (5%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNP 60
MES+AKLH HQP +LS N HRPSFPK I ISL S ++
Sbjct: 1 MESVAKLHCRHQPFNLSLNPHRPSFPKPI--ISLSFKTPPP----SSSSPFKLSSTSIRA 54
Query: 61 KPSLLRTLTPLSSPL---IKITSVTV-AAAALLFMRLPFHSIKPAIAAPVAAAATVESTN 116
S +TPL+ L IKITS+T+ AAAAL F RL +IKPAIA+P+ A++TV+ T
Sbjct: 55 SSSSSSRITPLNKNLGTIIKITSITLTAAAALFFTRL---NIKPAIASPLTASSTVDPTE 111
Query: 117 ESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLI 176
ES+K E+VSYEE+E+ ++ +L+ NPNDIEAL++LMEVRIKS+KLVEA++V+DRLI
Sbjct: 112 ESSK------ENVSYEEQERALQDYLSQNPNDIEALRSLMEVRIKSKKLVEAIEVVDRLI 165
Query: 177 ELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE 236
ELEPNE EW LLK+Q+ +Y+G+ E+A GFE IL+KDPLRVEAYHGLVMA S L
Sbjct: 166 ELEPNEDEWPLLKSQIYTYSGDFESAKDGFEAILKKDPLRVEAYHGLVMANSESGGSLEV 225
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
V KRIE AM++CKKEKK SDLRDFKLL+AQ++VME K+ +AL+VYEELVKEEPRDFRPYL
Sbjct: 226 VLKRIESAMDKCKKEKKTSDLRDFKLLVAQVRVMEEKYLDALKVYEELVKEEPRDFRPYL 285
Query: 297 CQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
CQGIIYTLLRKKDEAEK+FE+F++LVP+NHPYREY VDNM ATK F +KV+RE
Sbjct: 286 CQGIIYTLLRKKDEAEKKFEQFKKLVPKNHPYREYLVDNMFATKFFSDKVERE 338
>gi|297827245|ref|XP_002881505.1| hypothetical protein ARALYDRAFT_482732 [Arabidopsis lyrata subsp.
lyrata]
gi|297327344|gb|EFH57764.1| hypothetical protein ARALYDRAFT_482732 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/350 (61%), Positives = 262/350 (74%), Gaps = 20/350 (5%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRT-PPSSSPFKFSCIRASSSPASQQN 59
MESL KLH QP LSF H SFPK+ S SLR+ P S+S K I+ASSS + Q+
Sbjct: 1 MESLGKLHLHQQPNHLSFTHFSSSFPKTPSSFSLRSLPKSTSSLKCVSIKASSSKS--QD 58
Query: 60 PKPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNEST 119
+ S L++ T VT AAA LF+ PAIAAPVAA +VES +S
Sbjct: 59 SRLSFLKS-----------TCVTFTAAAALFLVNLQLKPSPAIAAPVAATPSVESLKQSN 107
Query: 120 KDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELE 179
DVS EE+E+ +E HLA++P D+EAL++LMEVRIKS+KL+EA+++IDRLIELE
Sbjct: 108 NG------DVSLEEEERSLEDHLASHPEDVEALRSLMEVRIKSRKLIEAIELIDRLIELE 161
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
P E EW +LKA + SY+G+ E+A GFEEIL KDPLRV+AYHGLVMAY S LN VE+
Sbjct: 162 PEEKEWPILKANIFSYSGDLESAKTGFEEILVKDPLRVDAYHGLVMAYSDSGADLNAVEE 221
Query: 240 RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
RIE+AM RCKKEK + DLRDFKLL+AQI+V+E KH+EAL++YEELVKEEPRDFRPYLCQG
Sbjct: 222 RIEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQG 281
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
IIYT+L+K+DEAEKQFEKFRRLVP+NHPYREYF+DNMVATK+F EK RE
Sbjct: 282 IIYTVLKKQDEAEKQFEKFRRLVPKNHPYREYFMDNMVATKLFAEKAQRE 331
>gi|224088575|ref|XP_002308480.1| predicted protein [Populus trichocarpa]
gi|222854456|gb|EEE92003.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 214/353 (60%), Positives = 266/353 (75%), Gaps = 29/353 (8%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPP-SSSPFKFSCIRASSSPASQQN 59
MES+AK QPL+LS N HRPSFP I ++ +TPP SSSPFK S +SS
Sbjct: 1 MESIAK-----QPLNLSLNPHRPSFPNPIVSLTFKTPPPSSSPFKLSTSIRASS------ 49
Query: 60 PKPSLLRTLTPLSSPLIKITSVTV----AAAALLFMRLPFHSIKPAIAAPVAAAATVEST 115
+TPL+ L I T AAA L F R F+S KPAIA+PVAA++ ST
Sbjct: 50 -----SSRITPLNQSLTTIIKTTSITLTAAAVLFFTR--FNS-KPAIASPVAASS---ST 98
Query: 116 NESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRL 175
+ TK+ S++E+VS+EE+E+ ++ HLA NP+D+EAL++LMEVRIKS+KL EA++V+DRL
Sbjct: 99 ADPTKE--SSKENVSFEEQERALQDHLAQNPSDVEALRSLMEVRIKSKKLQEAIEVVDRL 156
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN 235
IELEPNE EW LLK+Q+ +Y+G+ E+A GFE +L+KDPLRVEAYHGLVMA S L
Sbjct: 157 IELEPNEDEWPLLKSQIYTYSGDFESAKDGFEAVLQKDPLRVEAYHGLVMANSESGGSLE 216
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
V KRIE AM +CKKEKK SDLRDFKLLIAQ++VME K+ +AL+VYEELVKEEPRDFRPY
Sbjct: 217 VVLKRIESAMNKCKKEKKNSDLRDFKLLIAQVRVMEEKYFDALKVYEELVKEEPRDFRPY 276
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
LCQG+IYTLLRKKDEAEK+FE+F++LVP+NHPYREY V+NM AT F EKV+R
Sbjct: 277 LCQGMIYTLLRKKDEAEKKFEQFKKLVPKNHPYREYLVENMFATNFFSEKVER 329
>gi|18404409|ref|NP_565860.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|4056493|gb|AAC98059.1| chloroplast lumen common protein family [Arabidopsis thaliana]
gi|114050659|gb|ABI49479.1| At2g37400 [Arabidopsis thaliana]
gi|330254299|gb|AEC09393.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 333
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/349 (60%), Positives = 261/349 (74%), Gaps = 19/349 (5%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNP 60
MESL KL QP LSF H SFPK S SLR+ P S+ F CI +S + Q+
Sbjct: 1 MESLGKLQLHQQPNHLSFTHFSSSFPKKPSSFSLRSLPRSTS-SFKCISIKASSSKSQDS 59
Query: 61 KPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTK 120
K S+L++ T V+ AAA LF+ PAIAAPVAA +ES +S
Sbjct: 60 KLSILKS-----------TCVSFTAAAALFLVNLQLKPSPAIAAPVAATPLMESLKQSNG 108
Query: 121 DTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP 180
+ VS+EE+E+ +E++LA++P+D+EAL++LMEVRIKS+KL+EA+++IDRLIELEP
Sbjct: 109 N-------VSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEP 161
Query: 181 NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR 240
E EW +LKA + SY+G+ E+A GFEEIL KDPLRVEAYHGLVMAY S LN VEKR
Sbjct: 162 EEKEWPMLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKR 221
Query: 241 IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGI 300
IE+AM RCKKEK + DLRDFKLL+AQI+V+E KH+EAL++YEELVKEEPRDFRPYLCQGI
Sbjct: 222 IEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGI 281
Query: 301 IYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
IYT+L+K++EAEKQFEKFRRLVP+NHPYREYF+DNMVA+K+F EKV RE
Sbjct: 282 IYTVLKKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQRE 330
>gi|21617936|gb|AAM66986.1| unknown [Arabidopsis thaliana]
Length = 333
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/349 (59%), Positives = 261/349 (74%), Gaps = 19/349 (5%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNP 60
MESL KL QP LSF H SFPK S SLR+ P S+ F CI +S + Q+
Sbjct: 1 MESLGKLQLHQQPNHLSFTHFSSSFPKKPSSFSLRSLPRSTS-SFKCISIKASSSKSQDS 59
Query: 61 KPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTK 120
K S+L++ T V+ AAA LF+ PAIAAPVAA +ES +S
Sbjct: 60 KLSILKS-----------TCVSFTAAAALFLVNLQLKPSPAIAAPVAATPLMESLKQSNG 108
Query: 121 DTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP 180
+ VS+EE+E+ +E++LA++P+D+EAL++LMEVRIKS+KL+EA+++IDRLIELEP
Sbjct: 109 N-------VSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEP 161
Query: 181 NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR 240
E EW +LKA + SY+G+ E+A GFEEIL KDPLRVEAYHGLVMAY S LN VE+R
Sbjct: 162 EEKEWPMLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEQR 221
Query: 241 IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGI 300
IE+AM RCKKEK + DLRDFKLL+AQI+V+E KH+EAL++YEELVKEEPRDFRPYLCQGI
Sbjct: 222 IEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGI 281
Query: 301 IYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
IYT+L+K++EAEKQFEKFRRLVP+NHPYREYF+DNMVA+K+F EKV RE
Sbjct: 282 IYTVLKKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQRE 330
>gi|225439850|ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267054 [Vitis vinifera]
Length = 351
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 214/366 (58%), Positives = 265/366 (72%), Gaps = 26/366 (7%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPA----- 55
MESLAKLH QPL LS HRPSF + IS S RT SSS K +RASSSP+
Sbjct: 1 MESLAKLHQRQQPLHLSLYDHRPSFSRPISSFSFRTSSSSSTSKSLFVRASSSPSSFSRH 60
Query: 56 ----SQQNPKPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAAT 111
QNPK TL P K + + +AAAA+ F R ++KP IAAP AAT
Sbjct: 61 SPTQDHQNPKSPFFETLLP---HFFKASCIAIAAAAVFFARF---NVKPVIAAP---AAT 111
Query: 112 VESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
VE +ST D+ VS EEKE+ +E+++ ++P+D+E L++LMEV+IK++KL EAVDV
Sbjct: 112 VEPFKQSTMDS------VSDEEKERTVEEYVESHPDDVEGLKSLMEVKIKNRKLQEAVDV 165
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD 231
I+RLI+LEP++ EW LLKA + SY+GESE A GFEEIL +PL VEAYHGLVMA SD
Sbjct: 166 IERLIQLEPDDKEWPLLKAHLYSYSGESELAKLGFEEILSANPLTVEAYHGLVMAVSQSD 225
Query: 232 --KKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
+LN+V KRIE AMERCKKEKKK DLRDFKLL+AQI+V+E K+++AL+VY+ELVKEEP
Sbjct: 226 SGDELNQVLKRIEAAMERCKKEKKKEDLRDFKLLVAQIRVIEGKYNDALKVYQELVKEEP 285
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
RDFRPYLCQGIIYTLLRKKDEAEKQF+K+RRLVP+ HPY YF DNM+AT++F + + +
Sbjct: 286 RDFRPYLCQGIIYTLLRKKDEAEKQFQKYRRLVPKGHPYARYFDDNMIATRVFSQMAENQ 345
Query: 350 SMASKS 355
SKS
Sbjct: 346 RSGSKS 351
>gi|6729507|emb|CAB67663.1| putative protein [Arabidopsis thaliana]
Length = 388
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/354 (55%), Positives = 253/354 (71%), Gaps = 29/354 (8%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPS-FPKSISFISLRTPPSSSPFKFSCIRASSSPASQQN 59
MESL KL HQP LSF H S FPK++ F S P SS +S + QN
Sbjct: 49 MESLGKLQLHHQPFHLSFTHTSSSTFPKNL-FKSSIQPISS----LKSASIKASSSKFQN 103
Query: 60 PKPSLLRTLTPL--SSP--LIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVEST 115
++TPL S+P L K T +T+ AA L + H PAIAAP+A +VES
Sbjct: 104 -------SITPLPKSTPFRLFKSTCITLTTAAAL-LLANLHLKSPAIAAPIAPPPSVES- 154
Query: 116 NESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRL 175
+E+V+ EE+E+ +++HL +P+D++AL++LMEV+IKS+KL EAV+VIDRL
Sbjct: 155 ----------KENVTLEEEERALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRL 204
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN 235
I+LEP E EW +LKA + +Y+G+ + A GFEEIL KDPLRVEAYHGL+MAY + L
Sbjct: 205 IKLEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAGLDLK 264
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
EVE RIE+AM +CKKE ++D RDFKLL+AQI+V+E KHSEAL++Y+ELVKEEPRDFRPY
Sbjct: 265 EVESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPY 324
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
LCQGIIYTLL+KKD+AE+QF+ FR+LVP+NHPYREYF+DNM+ATK+F EK RE
Sbjct: 325 LCQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMIATKLFSEKAQRE 378
>gi|18409862|ref|NP_566986.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|20466552|gb|AAM20593.1| putative protein [Arabidopsis thaliana]
gi|23198132|gb|AAN15593.1| putative protein [Arabidopsis thaliana]
gi|332645587|gb|AEE79108.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 340
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 196/354 (55%), Positives = 253/354 (71%), Gaps = 29/354 (8%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPS-FPKSISFISLRTPPSSSPFKFSCIRASSSPASQQN 59
MESL KL HQP LSF H S FPK++ F S P SS +S + QN
Sbjct: 1 MESLGKLQLHHQPFHLSFTHTSSSTFPKNL-FKSSIQPISS----LKSASIKASSSKFQN 55
Query: 60 PKPSLLRTLTPL--SSP--LIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVEST 115
++TPL S+P L K T +T+ AA L + H PAIAAP+A +VES
Sbjct: 56 -------SITPLPKSTPFRLFKSTCITLTTAAAL-LLANLHLKSPAIAAPIAPPPSVES- 106
Query: 116 NESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRL 175
+E+V+ EE+E+ +++HL +P+D++AL++LMEV+IKS+KL EAV+VIDRL
Sbjct: 107 ----------KENVTLEEEERALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRL 156
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN 235
I+LEP E EW +LKA + +Y+G+ + A GFEEIL KDPLRVEAYHGL+MAY + L
Sbjct: 157 IKLEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAGLDLK 216
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
EVE RIE+AM +CKKE ++D RDFKLL+AQI+V+E KHSEAL++Y+ELVKEEPRDFRPY
Sbjct: 217 EVESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPY 276
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
LCQGIIYTLL+KKD+AE+QF+ FR+LVP+NHPYREYF+DNM+ATK+F EK RE
Sbjct: 277 LCQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMIATKLFSEKAQRE 330
>gi|297741536|emb|CBI32668.3| unnamed protein product [Vitis vinifera]
Length = 314
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 202/349 (57%), Positives = 248/349 (71%), Gaps = 39/349 (11%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNP 60
MESLAKLH QPL LS HRPSF + IS S RT SSS K +RASSS
Sbjct: 1 MESLAKLHQRQQPLHLSLYDHRPSFSRPISSFSFRTSSSSSTSKSLFVRASSS------- 53
Query: 61 KPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTK 120
S AAA+ F R ++KP IAAP AATVE +ST
Sbjct: 54 ------------------PSSFSPAAAVFFARF---NVKPVIAAP---AATVEPFKQSTM 89
Query: 121 DTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP 180
D+ VS EEKE+ +E+++ ++P+D+E L++LMEV+IK++KL EAVDVI+RLI+LEP
Sbjct: 90 DS------VSDEEKERTVEEYVESHPDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEP 143
Query: 181 NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD--KKLNEVE 238
++ EW LLKA + SY+GESE A GFEEIL +PL VEAYHGLVMA SD +LN+V
Sbjct: 144 DDKEWPLLKAHLYSYSGESELAKLGFEEILSANPLTVEAYHGLVMAVSQSDSGDELNQVL 203
Query: 239 KRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQ 298
KRIE AMERCKKEKKK DLRDFKLL+AQI+V+E K+++AL+VY+ELVKEEPRDFRPYLCQ
Sbjct: 204 KRIEAAMERCKKEKKKEDLRDFKLLVAQIRVIEGKYNDALKVYQELVKEEPRDFRPYLCQ 263
Query: 299 GIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVD 347
GIIYTLLRKKDEAEKQF+K+RRLVP+ HPY YF DNM+AT+ +K++
Sbjct: 264 GIIYTLLRKKDEAEKQFQKYRRLVPKGHPYARYFDDNMIATRKIEKKIE 312
>gi|297820086|ref|XP_002877926.1| chloroplast lumen common family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323764|gb|EFH54185.1| chloroplast lumen common family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 340
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 194/352 (55%), Positives = 252/352 (71%), Gaps = 25/352 (7%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSF-PKSISFISLRTPPSSSPFKFSCIRASSSPASQQN 59
MESL KL HQP LSF H S PK++ S+R P SS F +S + Q+
Sbjct: 1 MESLGKLQLHHQPFQLSFTHTSSSSFPKNLFRTSIR--PISS---FKSASIKASSSKFQD 55
Query: 60 PKPSLLRTLTPLSSP--LIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNE 117
TL P S+P L+K T +T+ AA L + H PAIAAPVA +VES
Sbjct: 56 SI-----TLLPKSTPFRLLKSTCITLTTAAAL-LLANLHLKSPAIAAPVAPPPSVES--- 106
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
+E+V+ E++E+ +++HL +P+D++AL++LMEV+I+S+KL EAV+VIDRLI+
Sbjct: 107 --------KENVTLEDEERALDEHLITHPSDVDALRSLMEVKIRSRKLSEAVEVIDRLIK 158
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV 237
LEP E EW +LKA + +Y+G+ + A GFEEIL KDPLRVEAYHGL+MAY + L EV
Sbjct: 159 LEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAGLDLKEV 218
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
E RIE+AM +CKKE +D RDFKLL+AQI+V+E KHSEAL++Y+ELVKEEPRDFRPYLC
Sbjct: 219 ESRIEEAMLKCKKENNHNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLC 278
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
QGIIYTLL+KKD+AE+QF+ FR+LVP+NHPYREYF+DNM+ATK+F EK RE
Sbjct: 279 QGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMIATKLFSEKAQRE 330
>gi|18413971|ref|NP_568104.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|21553360|gb|AAM62453.1| unknown [Arabidopsis thaliana]
gi|332003111|gb|AED90494.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 326
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 177/346 (51%), Positives = 234/346 (67%), Gaps = 24/346 (6%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNP 60
M SLAK H Q L L + HR PK +S+ L PP S IRASS + NP
Sbjct: 1 MVSLAKFHYCDQTLHLRLDTHRKPQPKPVSYRILHKPPPSR-----VIRASSFSS---NP 52
Query: 61 KPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTN-EST 119
KPS L+T T VT+ AA L S KP AA + + ST + T
Sbjct: 53 KPSFLKT-----------TCVTLTTAAALLSASLHLSTKPVTAATLVSPPPPPSTAADLT 101
Query: 120 KDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELE 179
D S+R E+E +E+HL NPND+EALQ+LM+++ +++ + A+++++RLIE++
Sbjct: 102 SDQISSRPKEE--EEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQ 159
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
P E EW++LKAQVQ+Y G+ ++A KGFEE+L KDP RVEAYHGLVMAY S+ KL+E+E
Sbjct: 160 PEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIES 219
Query: 240 RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
RI +A+E+CKKE KK D RDF LLIAQI+V++ EALRVY+ELVK+EP+DFRPYLCQG
Sbjct: 220 RINEAIEKCKKENKK-DFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQG 278
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVAT-KIFGE 344
+IYTL++KKDEAEKQF +FRRLVP NHPY+EY N++ T K+F +
Sbjct: 279 LIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNTNKLFAK 324
>gi|7413648|emb|CAB85996.1| putative protein [Arabidopsis thaliana]
Length = 407
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/349 (51%), Positives = 235/349 (67%), Gaps = 24/349 (6%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNP 60
M SLAK H Q L L + HR PK +S+ L PP S IRASS + NP
Sbjct: 1 MVSLAKFHYCDQTLHLRLDTHRKPQPKPVSYRILHKPPPSR-----VIRASSFSS---NP 52
Query: 61 KPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTN-EST 119
KPS L+T T VT+ AA L S KP AA + + ST + T
Sbjct: 53 KPSFLKT-----------TCVTLTTAAALLSASLHLSTKPVTAATLVSPPPPPSTAADLT 101
Query: 120 KDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELE 179
D S+R E+E +E+HL NPND+EALQ+LM+++ +++ + A+++++RLIE++
Sbjct: 102 SDQISSRPKEE--EEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQ 159
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
P E EW++LKAQVQ+Y G+ ++A KGFEE+L KDP RVEAYHGLVMAY S+ KL+E+E
Sbjct: 160 PEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIES 219
Query: 240 RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
RI +A+E+CKKE KK D RDF LLIAQI+V++ EALRVY+ELVK+EP+DFRPYLCQG
Sbjct: 220 RINEAIEKCKKENKK-DFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQG 278
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVAT-KIFGEKVD 347
+IYTL++KKDEAEKQF +FRRLVP NHPY+EY N++ T K+F + D
Sbjct: 279 LIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLDANVLNTNKLFAKNHD 327
>gi|297806195|ref|XP_002870981.1| hypothetical protein ARALYDRAFT_487037 [Arabidopsis lyrata subsp.
lyrata]
gi|297316818|gb|EFH47240.1| hypothetical protein ARALYDRAFT_487037 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/339 (52%), Positives = 233/339 (68%), Gaps = 16/339 (4%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNP 60
M SL K H Q L L + HR PK +S L+ PP S F+ +SSS +S NP
Sbjct: 1 MASLTKFHYCDQTLHLRLDTHRKPQPKPVSHRILQKPPPSRAFR---ASSSSSSSSSSNP 57
Query: 61 KPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTK 120
KPS +T T VT+ AA LF + KPA AA + + ST
Sbjct: 58 KPSFFKT-----------TCVTLTTAAALFSASLHLATKPATAATLVSPPPPPSTTADLT 106
Query: 121 DTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP 180
D S+R+ E+E +E+HL NPND+EALQ+LM+++ +++ L A+++++RLIE+EP
Sbjct: 107 DQISSRQKEE--EEEAALEKHLTNNPNDVEALQSLMKIKFQTKNLDHALEILNRLIEIEP 164
Query: 181 NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR 240
E EW++LKAQVQ+Y G+ E+A KGFEEIL KDP RVEAYHGLVMAY S+ KL+E+E R
Sbjct: 165 GEQEWRILKAQVQTYGGDFESATKGFEEILAKDPFRVEAYHGLVMAYSESESKLSEIESR 224
Query: 241 IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGI 300
I +A+E+CKKE KK D RDF LLIAQI+V++ EALRVY+ELVK+EP+DFRPYLCQG+
Sbjct: 225 INEAIEKCKKENKKKDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGL 284
Query: 301 IYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVAT 339
IYTL++KKDEAEKQFE+FRRLVP NHPY++YF N++ T
Sbjct: 285 IYTLMKKKDEAEKQFEEFRRLVPENHPYKDYFDANVLNT 323
>gi|449440018|ref|XP_004137782.1| PREDICTED: uncharacterized protein LOC101207402 [Cucumis sativus]
gi|449530566|ref|XP_004172265.1| PREDICTED: uncharacterized LOC101207402 [Cucumis sativus]
Length = 346
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/368 (49%), Positives = 239/368 (64%), Gaps = 35/368 (9%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFISLRT-------PPSSSPFKFSCIRASSS 53
M+SL +L H H PSF + +S +S RT SS F ++SS
Sbjct: 1 MDSLGRLQDCH---------HLPSFSRPLSSLSFRTRLSVPSSSSKSSSRAFPSFQSSSF 51
Query: 54 PA---SQQNPKPSLLRTLTPLSSPLIKITSVTV-AAAALLFMRLPFHSIKPAIAAPVAAA 109
+ + Q P+ SL L P+SS ++K TSVT+ AAAAL FMR A
Sbjct: 52 DSVFRTPQRPRSSLPLILDPISSSILKTTSVTLTAAAALFFMRF----CGKPAIAAPIPP 107
Query: 110 ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPND-IEALQTLMEVRIKSQKLVEA 168
TV+S ES KD + S EKE +E+ L ND +EAL++L+EV++K++K EA
Sbjct: 108 PTVDSVKESMKD------EGSRGEKETVLEEELV---NDSVEALRSLIEVKVKARKFPEA 158
Query: 169 VDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD 228
+ ++DRLIELEPN+ EW +LKA V S+ G SE A F++IL KDP +VEAYHGLVM +
Sbjct: 159 IKILDRLIELEPNDLEWLVLKANVYSHVGNSELARNEFQKILEKDPFQVEAYHGLVMLTE 218
Query: 229 GSD-KKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
SD L + R+E+A+E CKK K KS+ RDFKLLIAQIKVME +SEAL+ Y+EL +E
Sbjct: 219 TSDIDSLKAILNRVEEALEHCKKHKGKSEERDFKLLIAQIKVMEGSYSEALKDYQELKRE 278
Query: 288 EPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVD 347
EPRDFRPYLCQGI+YTLL++ DEAEKQFE FRRLVP+NHPY+EYF +NM A K F ++++
Sbjct: 279 EPRDFRPYLCQGILYTLLKRNDEAEKQFEIFRRLVPKNHPYKEYFDENMFAAKHFVQQIE 338
Query: 348 RESMASKS 355
R++ AS +
Sbjct: 339 RDAAASNN 346
>gi|449448671|ref|XP_004142089.1| PREDICTED: uncharacterized protein LOC101218852 isoform 1 [Cucumis
sativus]
gi|449448673|ref|XP_004142090.1| PREDICTED: uncharacterized protein LOC101218852 isoform 2 [Cucumis
sativus]
Length = 345
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 179/358 (50%), Positives = 229/358 (63%), Gaps = 18/358 (5%)
Query: 1 MESLAKLHGGHQPLS--LSFNHHRPSFPKSISFISLRT-PPSSSPFKFSCIRASSSPASQ 57
MESL LH P LSF H PS K IS +S R+ PPS +R +S +S
Sbjct: 1 MESLPTLHHRSYPSHQLLSFTHRFPSLSKPISSLSFRSLPPSRLRSSVRSLRVKASSSSS 60
Query: 58 QNPKPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNE 117
+ S L L S +K ++ A AA F+R F + A A T EST+E
Sbjct: 61 TSDDTSPLNV--GLLSGFLKTACISAAVAAFFFLR--FDHRRAVAVAVQVAPETTESTDE 116
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
ST+ YEE E +E+ A + ND+EAL++L+E +KS KL EA++ ++RLIE
Sbjct: 117 STE----------YEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPEAIEALNRLIE 166
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL-VMAYDGSDKKLNE 236
LEPN+ E LLKA SY GE E A FE+IL +DP VEAYHGL +A +D L +
Sbjct: 167 LEPNDPELPLLKANFYSYMGELELAKNEFEDILARDPFVVEAYHGLATVAEQLNDNSLKD 226
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
V KRIE+AM++CK +K KSD+RDFKLL+AQIKVME + EAL+ Y+ELV+EEPRDFRPYL
Sbjct: 227 VAKRIEEAMKKCKNQKDKSDIRDFKLLVAQIKVMEGSYHEALKAYKELVREEPRDFRPYL 286
Query: 297 CQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRESMASK 354
CQGIIYTLL K +EAEK FEKFRRLVP+NHPY+EY +NM ATK+ +K+++E SK
Sbjct: 287 CQGIIYTLLSKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKERAGSK 344
>gi|449523355|ref|XP_004168689.1| PREDICTED: uncharacterized protein LOC101226779 isoform 1 [Cucumis
sativus]
gi|449523357|ref|XP_004168690.1| PREDICTED: uncharacterized protein LOC101226779 isoform 2 [Cucumis
sativus]
Length = 345
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/358 (50%), Positives = 229/358 (63%), Gaps = 18/358 (5%)
Query: 1 MESLAKLHGGHQPLS--LSFNHHRPSFPKSISFISLRT-PPSSSPFKFSCIRASSSPASQ 57
MESL LH P LSF H PS K IS +S R+ PPS +R +S +S
Sbjct: 1 MESLPTLHHRSYPSHQLLSFTHRFPSLSKPISSLSFRSLPPSRLRSSVRSLRVKASSSSS 60
Query: 58 QNPKPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNE 117
+ S L L S +K ++ A AA F+R F + A A T EST+E
Sbjct: 61 TSDDTSPLNV--GLLSGFLKTACISAAVAAFFFLR--FDHRRAVAVAVQVAPETTESTDE 116
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
ST+ YEE E +E+ A + ND+EAL++L+E +KS KL EA++ ++RLIE
Sbjct: 117 STE----------YEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPEAIEALNRLIE 166
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL-VMAYDGSDKKLNE 236
LEPN+ E LLKA SY GE E A FE+IL +DP VEAYHGL +A +D L +
Sbjct: 167 LEPNDPELPLLKANFYSYMGELELAKNEFEDILARDPFVVEAYHGLATVAEQLNDNSLKD 226
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
V KRIE+AM++CK +K KSD+RDFKLL+AQIKVME + EAL+ Y+ELV+EEPRDFRPYL
Sbjct: 227 VAKRIEEAMKKCKNQKDKSDIRDFKLLVAQIKVMEGSYHEALKAYKELVREEPRDFRPYL 286
Query: 297 CQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRESMASK 354
CQGIIYTLL K +EAEK FEKFRRLVP+NHPY+EY +NM ATK+ +K+++E SK
Sbjct: 287 CQGIIYTLLSKSEEAEKYFEKFRRLVPKNHPYKEYLDENMFATKLIAQKLEKERADSK 344
>gi|356570712|ref|XP_003553529.1| PREDICTED: uncharacterized protein LOC100778644 [Glycine max]
Length = 351
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/308 (55%), Positives = 220/308 (71%), Gaps = 20/308 (6%)
Query: 54 PASQQNPK------PSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVA 107
P+SQ +P P LL+TLT SP+++ T + +AAAAL FMR FH PAIAAP+
Sbjct: 58 PSSQNHPSFRTPSLPPLLQTLTSFLSPVVETTCIVIAAAALFFMR--FHHTPPAIAAPLT 115
Query: 108 AAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVE 167
A T + EE E +E+ L+ NP D +AL LMEV+I+++K+ E
Sbjct: 116 PPAAESDTA------------FTEEEAESLLEERLSTNPRDTDALHALMEVKIRARKMDE 163
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A V+DRLIELEP E EW LLKA + Y + +A + FEEIL+KDPLRVEA+HGLVMA
Sbjct: 164 AFGVLDRLIELEPEELEWPLLKANMHIYNDDHASARELFEEILKKDPLRVEAFHGLVMAT 223
Query: 228 DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
S++ L + KR+E+A+E CKK+K+ SD+RDF+LLIAQ+KVME SEAL+ Y+ELVKE
Sbjct: 224 SQSNEPLKGLLKRVEEAIEVCKKQKRDSDVRDFRLLIAQVKVMEGDFSEALKAYQELVKE 283
Query: 288 EPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVD 347
EPRDFRPYLCQGIIYTLLRKKDEA+KQF+KFRRLVP++HPY++YF DNM ATK F +K++
Sbjct: 284 EPRDFRPYLCQGIIYTLLRKKDEADKQFDKFRRLVPKDHPYKDYFEDNMFATKFFSQKLE 343
Query: 348 RESMASKS 355
RE ++
Sbjct: 344 REGAGARG 351
>gi|356548160|ref|XP_003542471.1| PREDICTED: uncharacterized protein LOC100812214 [Glycine max]
Length = 329
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/261 (49%), Positives = 174/261 (66%), Gaps = 19/261 (7%)
Query: 76 IKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKE 135
+K T + +AA A FMRL HS PVA A+T + ES + T E + E+
Sbjct: 73 VKPTCIAIAATAFFFMRL--HS------PPVAFASTPVAPPESAESETLPNESATEEQ-- 122
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
D +ALQ+L++ +I++ ++ EA+ V+DRL ELEP E E+ LLKA +
Sbjct: 123 --------LRTTDTDALQSLLQTKIRALEINEAIRVLDRLTELEPEESEYPLLKAHLHMR 174
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMER-CKKEKKK 254
GE E A FEE+L +DP VEAY GL+M ++K E+ KRIE+A + C+++++
Sbjct: 175 YGEHELAANVFEELLHRDPFHVEAYRGLLMLTSETNKPTEELLKRIEEAAAKVCEEQERD 234
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
SD+RD KLLIAQIKV+ SEAL+VYEELVKEEP+DFRPYLCQGI+Y++LRKKDEAEKQ
Sbjct: 235 SDVRDLKLLIAQIKVINGDLSEALKVYEELVKEEPKDFRPYLCQGIVYSMLRKKDEAEKQ 294
Query: 315 FEKFRRLVPRNHPYREYFVDN 335
FEK+R LVP +HPY+ +F +N
Sbjct: 295 FEKYRALVPEDHPYKHHFEEN 315
>gi|15232691|ref|NP_187560.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|6682229|gb|AAF23281.1|AC016661_6 hypothetical protein [Arabidopsis thaliana]
gi|119360093|gb|ABL66775.1| At3g09490 [Arabidopsis thaliana]
gi|332641252|gb|AEE74773.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 334
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/331 (44%), Positives = 194/331 (58%), Gaps = 38/331 (11%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISF-ISLRTPPSSSPFKFSCIRASSSPASQQN 59
M S A L+L N P +SF + R S+P +F IRASSS +S N
Sbjct: 1 MASPATFQFSRTKLNLQINLVERKSPSKLSFPLLFRDQAKSTPIRFPVIRASSS-SSASN 59
Query: 60 PKPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNEST 119
KPSLL+T T +++ AAA LF + K A PVA VE+T
Sbjct: 60 HKPSLLKT-----------TFISLTAAAALFSASFYFVNKRAAMTPVAV---VETT---- 101
Query: 120 KDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELE 179
+E+HL ND+ AL L E++ KS K +A+ +DRLIE+E
Sbjct: 102 ------------------LEKHLETQSNDVNALSLLTEIKFKSDKHEQAIVFLDRLIEIE 143
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
P E +W +KA++ SY G+SE+AI+ FEEIL KDP+RV+AYH LVM Y S KL E+EK
Sbjct: 144 PYERKWPAMKARILSYHGKSESAIEAFEEILEKDPIRVDAYHYLVMEYYNSKPKLTEIEK 203
Query: 240 RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
RI K + RCKKEKK ++ F++LIAQI+ +E K EA+R+ EELVKE+P DF YL QG
Sbjct: 204 RINKVIRRCKKEKKTKEILGFRMLIAQIRFIEGKSVEAIRICEELVKEDPNDFTIYLFQG 263
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE 330
++YTL+ K +EA KQFE R++PRNHP RE
Sbjct: 264 VVYTLMNKGEEAAKQFEHVARVIPRNHPSRE 294
>gi|297829478|ref|XP_002882621.1| hypothetical protein ARALYDRAFT_341089 [Arabidopsis lyrata subsp.
lyrata]
gi|297328461|gb|EFH58880.1| hypothetical protein ARALYDRAFT_341089 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 141/193 (73%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E+ L ND++AL L E++ KS + +A++V+DRLIE+EP+E +W +KA++ SY G
Sbjct: 66 VEETLEILSNDVKALSLLTEIKFKSDRHEQAIEVLDRLIEIEPDERKWPAMKARILSYHG 125
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+SE AI+ FE IL KDP+RV+AYH LVM Y S KL E+EKRI K + RCKKEKK ++
Sbjct: 126 KSELAIEAFERILEKDPIRVDAYHYLVMEYYNSKPKLTELEKRINKVIRRCKKEKKAKEI 185
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
F++LIAQIK ++ EA+R+ EELVK++P DF YL QGI+Y L+ K++EA KQFE+
Sbjct: 186 CGFRMLIAQIKFIQGNSLEAIRICEELVKDDPEDFTIYLFQGIVYILMNKEEEAAKQFEQ 245
Query: 318 FRRLVPRNHPYRE 330
R++P NHP RE
Sbjct: 246 VARVMPMNHPSRE 258
>gi|255578809|ref|XP_002530261.1| conserved hypothetical protein [Ricinus communis]
gi|223530227|gb|EEF32131.1| conserved hypothetical protein [Ricinus communis]
Length = 352
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 150/259 (57%), Gaps = 18/259 (6%)
Query: 86 AALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAAN 145
A +FM + +P++A P +A E +DT + E E+ E+ L
Sbjct: 89 GAFIFMGSFGFNARPSLALPAQESAYTEEM----RDT-----QMKNNEDEEMYEKFLEKE 139
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P ++EAL+ ++ +I+ K EA+ ++RLI+ EP+E EW+LL+A G+ A +
Sbjct: 140 PRNMEALKVVVYGKIRKGKTKEALKYVERLIKTEPDEVEWRLLEALCWEMMGQLSKAKRL 199
Query: 206 FEEILRKDPLRVEAYHGLVMA----YDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
F+EIL + PL + A HGL M ++G V + + KA+E EK+ + R+ K
Sbjct: 200 FKEILEERPLLLRALHGLAMVMHKNFEGP-----AVFEMLNKALEVAYHEKRIMEERNIK 254
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
+LIAQ+ V+ + E L+ +++LV E PRDFRPYLCQGIIY+LL KK+EA +QFE +R L
Sbjct: 255 ILIAQMHVVMGRLEEGLKNFQDLVNENPRDFRPYLCQGIIYSLLDKKEEAAEQFETYRSL 314
Query: 322 VPRNHPYREYFVDNMVATK 340
+P + P R + D ++A K
Sbjct: 315 LPEDFPQRGFLDDVVLAAK 333
>gi|224093902|ref|XP_002310040.1| predicted protein [Populus trichocarpa]
gi|222852943|gb|EEE90490.1| predicted protein [Populus trichocarpa]
Length = 345
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 178/319 (55%), Gaps = 24/319 (7%)
Query: 38 PSSSPFKFSCIRASSSPASQQNPKPSLLRTLTPL---SSPLIKITSVTVAAAALLFMRLP 94
P S P F +++S + S + KP LL ++ PL S + I+S + + F ++P
Sbjct: 9 PCSPPSHFQNLKSSKNCNSSTSLKP-LLCSMNPLNIHSRHKLHISSNICSKSP--FPQIP 65
Query: 95 FHSI------------KPAIAAPVAAAATVESTNESTKDTTS--AREDVSYEEKEKE--I 138
SI + + + V A + S +T+ + + A+ + E+ E E
Sbjct: 66 TSSISKKNNNFTSFLSEKVLVSLVGAFIFIGSFGLNTRQSLALPAQTNAQMEKSEDEEMY 125
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E+ L P ++EAL+ ++ +++ + EAV + RLIE+EP E EW+LL+A G+
Sbjct: 126 EKVLEKEPRNVEALKVVLHGKMRRGQTKEAVKYVGRLIEIEPEEVEWRLLEALCYEMMGQ 185
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
A + F EIL + PL + A HGL + + + V + + KA+E +EK+ ++ R
Sbjct: 186 LNKAKRLFNEILEERPLLLRALHGLALVMH-KNLEGPAVFEMLNKALEVAHREKRVTEER 244
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+ ++LIAQ+ V++ EAL+ ++ LV + PRDFRPYLCQGIIY+LL +K+EA +QFE +
Sbjct: 245 NIRILIAQMHVVKGDFEEALKKFQGLVSDNPRDFRPYLCQGIIYSLLDRKEEAAEQFETY 304
Query: 319 RRLVPRNHPYREYFVDNMV 337
R LVP P R F+D++V
Sbjct: 305 RSLVPEEFPQR-IFLDDVV 322
>gi|225438525|ref|XP_002275767.1| PREDICTED: uncharacterized protein LOC100254208 [Vitis vinifera]
Length = 345
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 149/260 (57%), Gaps = 8/260 (3%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
V +++FM +PA+A P A S E +D S E + +
Sbjct: 75 VVFLVGSVIFMWCL--GARPAMALP-AHMGRYSSNVEQKRDAQD-----SESEHDDMYAK 126
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
L +P ++EAL+ ++ +++ K EAV+ ++RLI++EP+E EW+LL+A G
Sbjct: 127 ILEKDPRNVEALKVVLYGKMRRGKTKEAVEYVERLIDIEPDEVEWRLLQALSYEIMGHLS 186
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDF 260
A + F+EIL++ PL + A HGL + + + + V + + A+E + +K+ ++ R
Sbjct: 187 KAKRLFKEILKERPLLLRALHGLALVMHKNHEGPDAVFEMLNNALEVARHQKRVTEERSI 246
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
++LIAQ+ V++ E L+ +++LV E PRDFRPYLCQGIIY+LL KK EA++QFE +R
Sbjct: 247 RILIAQMHVVQGDLEEGLKKFQDLVDENPRDFRPYLCQGIIYSLLDKKKEAQEQFEIYRT 306
Query: 321 LVPRNHPYREYFVDNMVATK 340
LVP P R + D + A K
Sbjct: 307 LVPEEFPQRGFLNDVVSAAK 326
>gi|297802046|ref|XP_002868907.1| chloroplast lumen common family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314743|gb|EFH45166.1| chloroplast lumen common family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 340
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 177/329 (53%), Gaps = 31/329 (9%)
Query: 20 HHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNPKPS-----LLRTLTPLSSP 74
HHR + LR P + F+F R S A N PS L+R+ T L S
Sbjct: 16 HHRREQLLIFTPTHLRNP---NGFQFRW-RKSRPFAQSVNFAPSFSQLPLIRSSTSLLSS 71
Query: 75 LIKITSVTVAAAALL---FMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSY 131
+ + AA LL F+ L F S KPA+A P A TV S E
Sbjct: 72 KDFVQILARKAAILLVGSFVFLGFCSSKPALALPTA---TVVSQAEL------------- 115
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E EK E+ L + P ++EA++ ++ +++ K +AV +++L++LEP+E EW+LL+A
Sbjct: 116 -EDEKMFEKLLESEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEAL 174
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G+ A + +++IL++ PL + A HGL M + V + +AME ++
Sbjct: 175 CYETMGQLSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD--TSVFDMLMEAMEVARQG 232
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ ++ R+ ++LI Q+ +++ + E L++++++V + PRDFRPYLCQGI+Y+L+ KK+EA
Sbjct: 233 NRVTEERNIQVLIGQMHIVQGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEA 292
Query: 312 EKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+QFE + LVP P + + D +A +
Sbjct: 293 AQQFENYWSLVPEEFPQKGFLDDVALAAQ 321
>gi|356516307|ref|XP_003526837.1| PREDICTED: uncharacterized protein LOC100798720 [Glycine max]
Length = 356
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 173/333 (51%), Gaps = 17/333 (5%)
Query: 18 FNHHRPSFPKSIS--FISLRTPPSSSPFKFSCIRASSSPASQQNPKPSLLRTLTPLSSPL 75
++H +P F + I R +S FK + +RA+ + PS + P L
Sbjct: 12 YSHSQPKFLNLLQHPLIHTRNKSTSITFKPAIVRATLFSTLTCSHTPSTPSSNLPPGRAL 71
Query: 76 IKITSVTVAAAALL-FMRLPFHSIKPAIA--APVAAAATV--ESTNESTKDTTSAREDVS 130
K S VA + F+ S +PA A AP + V E N + + + +
Sbjct: 72 TKFLSEKVAFFLIGSFLLSGCFSKRPAFAETAPSVGSGAVLEEKMNPTEEKNEEEKSEEE 131
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
EE + I L +P ++EAL+ ++ +I+ K EAV V++ LI EPNE EW+LL A
Sbjct: 132 VEEMWEGI---LEKDPKNVEALKVVLYGKIRRGKSKEAVKVVEDLIAAEPNEVEWRLLLA 188
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE---VEKRIEKAMER 247
G+ A + F EIL+K PL V A HGL MA K++E V + + A E
Sbjct: 189 LCYETMGQLSKAKRLFREILKKRPLLVRALHGLAMAMH----KIHEGPAVFEMLNNAQEL 244
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+E + ++ R+ ++LIAQ+ V++ E L+ ++EL+ + RDFRPY+CQGIIY+LL K
Sbjct: 245 ASRENRVTEERNIRILIAQMHVVQGNLEEGLKRFQELIDQNRRDFRPYICQGIIYSLLGK 304
Query: 308 KDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+EA +QFE ++ LVP P R + D +A K
Sbjct: 305 NEEAAQQFETYQTLVPEEFPQRRFLDDVAIAAK 337
>gi|18420460|ref|NP_568061.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|15215656|gb|AAK91373.1| AT4g39470/F23K16_100 [Arabidopsis thaliana]
gi|28416459|gb|AAO42760.1| At4g39470/F23K16_100 [Arabidopsis thaliana]
gi|332661676|gb|AEE87076.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 341
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 160/284 (56%), Gaps = 22/284 (7%)
Query: 60 PKPSLLRTLTPLSSPLIKITSVTVAAAALL---FMRLPFHSIKPAIAAPVAAAATVESTN 116
P L+R+ T L S + + AA LL F+ L F S KPA+A P A TV S
Sbjct: 58 PPLPLIRSSTSLLSSKDFVQMLARKAAILLVGSFVFLGFCSSKPALALPTA---TVVSQA 114
Query: 117 ESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLI 176
E E EK E+ L P ++EA++ ++ +++ K +AV +++L+
Sbjct: 115 EL--------------EDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLM 160
Query: 177 ELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE 236
+LEP+E EW+LL+A GE A + +++IL++ PL + A HGL M +
Sbjct: 161 KLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD--TS 218
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
V + +AME ++ + ++ R+ ++LI Q+ ++E + E L++++++V + PRDFRPYL
Sbjct: 219 VFDMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYL 278
Query: 297 CQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
CQGI+Y+L+ KK+EA +QFE + LVP P + + D +A +
Sbjct: 279 CQGIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGFLDDVALAAQ 322
>gi|356509026|ref|XP_003523253.1| PREDICTED: uncharacterized protein LOC100795327 [Glycine max]
Length = 356
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 121/199 (60%), Gaps = 1/199 (0%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +P ++EAL+ ++ +I+ K EAV ++ LI EPNE EW+LL A G+
Sbjct: 140 LEKDPKNVEALKVVLYGKIRKGKSKEAVKFVEDLIAAEPNEVEWRLLLALCYETMGQLSK 199
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A K F EIL+K PL V A HGL MA + + V + + A E +E + ++ R+ +
Sbjct: 200 AKKLFREILKKRPLLVRALHGLAMAMHKNHEG-PAVFEMLNNAQELASRENRVTEERNIR 258
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
+LIAQ+ V++ E L+ ++EL+ + PRDFRPY+CQGIIY+LL K +EA +QFE ++ L
Sbjct: 259 ILIAQMHVVQGNLEEGLKRFQELIDQNPRDFRPYICQGIIYSLLGKNEEAAQQFETYQTL 318
Query: 322 VPRNHPYREYFVDNMVATK 340
VP P R + D +A K
Sbjct: 319 VPEEFPQRGFLDDVAIAAK 337
>gi|296082522|emb|CBI21527.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 128/199 (64%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +P ++EAL+ ++ +++ K EAV+ ++RLI++EP+E EW+LL+A G
Sbjct: 35 LEKDPRNVEALKVVLYGKMRRGKTKEAVEYVERLIDIEPDEVEWRLLQALSYEIMGHLSK 94
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A + F+EIL++ PL + A HGL + + + + V + + A+E + +K+ ++ R +
Sbjct: 95 AKRLFKEILKERPLLLRALHGLALVMHKNHEGPDAVFEMLNNALEVARHQKRVTEERSIR 154
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
+LIAQ+ V++ E L+ +++LV E PRDFRPYLCQGIIY+LL KK EA++QFE +R L
Sbjct: 155 ILIAQMHVVQGDLEEGLKKFQDLVDENPRDFRPYLCQGIIYSLLDKKKEAQEQFEIYRTL 214
Query: 322 VPRNHPYREYFVDNMVATK 340
VP P R + D + A K
Sbjct: 215 VPEEFPQRGFLNDVVSAAK 233
>gi|449448428|ref|XP_004141968.1| PREDICTED: uncharacterized protein LOC101208394 [Cucumis sativus]
Length = 362
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 133/209 (63%), Gaps = 3/209 (1%)
Query: 132 EEKEKEI--EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
EE +E+ E+ L +P++++ L+ ++ +++S K AV + RLI+LEP+E EW++L
Sbjct: 134 EEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILL 193
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
A GE A + F EIL++ PL V A HGL + +++ V + + KA++ +
Sbjct: 194 ALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEG-ESVFEMLNKALDIAR 252
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
EKK ++ R +LIAQ+ V++ + E L+ ++ LV+E PRDFRP+LCQGIIY+LL KK
Sbjct: 253 DEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKK 312
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNMVA 338
EA +QFE ++ LVP P RE+ D M++
Sbjct: 313 EAAEQFETYQALVPDEFPQREFIDDVMLS 341
>gi|449463501|ref|XP_004149472.1| PREDICTED: uncharacterized protein LOC101212982 [Cucumis sativus]
gi|449526118|ref|XP_004170061.1| PREDICTED: uncharacterized LOC101212982 [Cucumis sativus]
Length = 345
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 172/330 (52%), Gaps = 19/330 (5%)
Query: 19 NHHRPSFPKSISFIS--LRTPPSSSPFKFSCIRASSSPASQQNPKPSLLRTLTPLSSPLI 76
N SF ++ F + R+ S PF+ +RASS P P P RT P+ L
Sbjct: 26 NSKMVSFSNNLRFAAPLSRSSVSVHPFR---VRASSVPV----PVP---RTHHPVVHCLR 75
Query: 77 KITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEK 136
+ A M F ++ PA A A A S E T ED + ++
Sbjct: 76 NYAKAAILIGAAATMVGKFSNL-PARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQS 134
Query: 137 E-IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
+ L +N +EAL++L++ ++++ + EA+ ++ +L+ P+ EW+ L A++
Sbjct: 135 SPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGE 194
Query: 196 AGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
G++E A + FEEIL +PL EA + L+M G + V +R+E+A+ + E K
Sbjct: 195 MGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEA---VIRRLEEALRIAENENK 251
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+ RD KL++AQI+ ++ EAL+ Y+ELVKE+P DFRPY CQG+IY+LL K EA++
Sbjct: 252 AKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQ 311
Query: 314 QFEKFRRLVPRNHPYREYFVDNMVATKIFG 343
QF K+R L P+ Y + KIFG
Sbjct: 312 QFAKYRELSPKKFEVDGYLRTPLSRMKIFG 341
>gi|449515817|ref|XP_004164944.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101230878 [Cucumis sativus]
Length = 362
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 132/209 (63%), Gaps = 3/209 (1%)
Query: 132 EEKEKEI--EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
EE +E+ E+ L +P++++ L+ ++ +++S K AV + RLI+LEP+E EW++L
Sbjct: 134 EEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILL 193
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
A GE A + F EIL++ PL V A HGL + +++ V + + KA++ +
Sbjct: 194 ALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEG-ESVFEMLNKALDIAR 252
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+K ++ R +LIAQ+ V++ + E L+ ++ LV+E PRDFRP+LCQGIIY+LL KK
Sbjct: 253 DXEKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKX 312
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNMVA 338
EA +QFE ++ LVP P RE+ D M++
Sbjct: 313 EAAEQFETYQALVPDEFPQREFIDDVMLS 341
>gi|168007300|ref|XP_001756346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692385|gb|EDQ78742.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 126/207 (60%), Gaps = 11/207 (5%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +P DI+AL+ LM +R++ + +A++++D L+ L P+ WQL++AQ + G+ +A
Sbjct: 16 LKRHPEDIKALEGLMYIRLRKGSVAKALEIVDDLLALRPDHAPWQLVRAQALEFLGDLKA 75
Query: 202 AIKGFEEILRKDPLRVEAYH------GL--VMAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
A FE++L KDPL A GL VM+ G +++ E+ +R A++ + K
Sbjct: 76 ARHAFEKVLEKDPLSARALQARNNCLGLATVMSKAGEGEEMLEMLRR---AVQTATQTGK 132
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+ ++ ++++ Q+ ++ EAL +Y+EL KE+P+DFRPYLCQG+IY+LL K +A+
Sbjct: 133 TRECKNLRMVLGQMYTVQGNFQEALELYKELEKEDPKDFRPYLCQGVIYSLLEDKVKADT 192
Query: 314 QFEKFRRLVPRNHPYREYFVDNMVATK 340
F K+RR P+ P R Y D M+ K
Sbjct: 193 AFLKYRRRCPKTFPERGYLDDLMIGAK 219
>gi|224081264|ref|XP_002306358.1| predicted protein [Populus trichocarpa]
gi|222855807|gb|EEE93354.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 131/205 (63%), Gaps = 2/205 (0%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E E+ E+ L P ++EAL+ ++ +++ + EAV ++RLI++EP + EW+LL+A
Sbjct: 82 EDEEMFEKVLEMEPRNVEALKVVVHGKMRRGQTKEAVKYVERLIDIEPEQVEWRLLEALC 141
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ A F+EIL + PL + A HGL + S + V + + KA+E ++EK
Sbjct: 142 YEMMGQLSKAKTLFKEILIERPLLLRALHGLALVMHKSLEG-PAVFEMLNKALEVARREK 200
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
+ ++ R+ ++LIAQ+ V++ + EAL+ ++ LV + PRDFRPYLCQGIIY+LL +K+ A
Sbjct: 201 RVTEERNIRILIAQMLVVKGELEEALKKFQGLVSDNPRDFRPYLCQGIIYSLLGRKEAAA 260
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMV 337
+ FE ++ LVP P R F+D++V
Sbjct: 261 EHFETYQSLVPDEFPQR-MFLDDVV 284
>gi|357464439|ref|XP_003602501.1| hypothetical protein MTR_3g095070 [Medicago truncatula]
gi|355491549|gb|AES72752.1| hypothetical protein MTR_3g095070 [Medicago truncatula]
Length = 333
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E+ L + ++EAL+ ++ +I+ K EA + RLI+ EPNE EW+LL A G
Sbjct: 114 EKILEKDSRNVEALKVIVYGKIRRGKCKEAEKFVKRLIDEEPNEVEWRLLLALCYETMGY 173
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
A + EIL PL V A HGL M +K+ V + + KA+E E K ++ R
Sbjct: 174 LSKAKGLYLEILENWPLFVRALHGLAMVMH-KNKEGPAVFEMLNKAVELAINENKVTEER 232
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+ K+L AQ++V++ E L+ ++L+ + PRDFRPYLCQGIIY+LL KK+EA KQFE +
Sbjct: 233 NIKILTAQMRVVQGDLEEGLKRCQDLIDQNPRDFRPYLCQGIIYSLLDKKEEAAKQFETY 292
Query: 319 RRLVPRNHPYREYFVDNMVATK 340
+ LVP P R + D +A K
Sbjct: 293 QALVPEEFPQRGFLDDITLAAK 314
>gi|18401882|ref|NP_566609.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
gi|11994105|dbj|BAB01108.1| unnamed protein product [Arabidopsis thaliana]
gi|14335158|gb|AAK59859.1| AT3g18420/MYF24_13 [Arabidopsis thaliana]
gi|18655375|gb|AAL76143.1| AT3g18420/MYF24_13 [Arabidopsis thaliana]
gi|21592430|gb|AAM64381.1| unknown [Arabidopsis thaliana]
gi|332642574|gb|AEE76095.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
Length = 316
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 159/301 (52%), Gaps = 32/301 (10%)
Query: 48 IRASSSPASQQNPKPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVA 107
IRASS+ S P ++ +++ + AA + M F ++ +PV
Sbjct: 38 IRASSNQNSSGYCFPEKFKSFAK--------SAILIGAA--VSMTGKFSTLPVKAESPVT 87
Query: 108 AAATVESTNESTKDTTSAREDVSYEEKEKEI---EQHLAANPNDIEALQTLMEVRIKSQK 164
T+E T E K EEK EI + L + P +E L++L++ +++ +
Sbjct: 88 ---TIEKTYEEVK-----------EEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGE 133
Query: 165 LVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HG 222
EA+ +++RL+ +P E EW+ L A++ G E A + FEEIL+++PL EA +
Sbjct: 134 DEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFEALFENA 193
Query: 223 LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYE 282
L+M G N V +R+E A+ + E + RD +L+IAQI ++ EAL+ YE
Sbjct: 194 LLMDRSGEG---NAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALKSYE 250
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIF 342
+L KE+P+DFRPY C+G+IY+LL K EA++QF K+R L P+ Y + K+F
Sbjct: 251 QLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRTPLSKMKLF 310
Query: 343 G 343
G
Sbjct: 311 G 311
>gi|255555529|ref|XP_002518801.1| conserved hypothetical protein [Ricinus communis]
gi|223542182|gb|EEF43726.1| conserved hypothetical protein [Ricinus communis]
Length = 331
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 183/341 (53%), Gaps = 31/341 (9%)
Query: 14 LSLSFNHHR-PSF--PKSISFISLRTPPSSSPFKFSCI------RASSSPASQQNPKPSL 64
L+ SF H + PSF P + F SL+ P +CI RASS K +
Sbjct: 6 LATSFLHLKAPSFNPPSLLQFPSLK--PHCH--NHTCIPSLKQIRASSDHTPNGTHKLPI 61
Query: 65 LRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTS 124
L++L ++ I I VT ++A+ SI PA A A T + ++ +
Sbjct: 62 LQSLKIITKAAILI-GVTASSASRF-------SILPAKAETSATVTEQTPTLQEEEEESQ 113
Query: 125 AREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE 184
A + + + + + L +N IE+L++L++ ++++ + EA+ ++ L+E +P E
Sbjct: 114 AENN-----QNQNLSEFLESNAEAIESLKSLLQQKLENGEDEEALKTLNHLVEAQPLVTE 168
Query: 185 WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIE 242
W+ L A++ + G ++ A FEEIL+ +PL EA + L+M G + V +R++
Sbjct: 169 WKFLMARLLNEMGRTQDARNLFEEILQMNPLSFEALFENALLMDRCGEG---DAVIRRLQ 225
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
+A++ ++E K + RD KL++AQI+ ++ EAL+ Y+EL KE+P DFRPY CQG+IY
Sbjct: 226 EALDIAEEENKVKEARDVKLIMAQIQFLQKNVEEALKSYQELSKEDPSDFRPYFCQGMIY 285
Query: 303 TLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFG 343
+LL + +EA +QF K+R+L + Y + K+FG
Sbjct: 286 SLLDRNEEAREQFAKYRQLSRKKFEVEGYLRTPLSRMKVFG 326
>gi|359473679|ref|XP_003631345.1| PREDICTED: uncharacterized protein LOC100852583 [Vitis vinifera]
Length = 312
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 169/334 (50%), Gaps = 32/334 (9%)
Query: 18 FNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNPKPSLLRTLTPLSSPLIK 77
F+ HR S ++SF R PS SP + R S ++ NP +L+ IK
Sbjct: 10 FHFHRSSLSSNVSFAFPR--PSISP-SYHHRRLRVSASANNNP---ILKA--------IK 55
Query: 78 ITSVT-VAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEK 136
++ T V AA +FM F ++ +P+ + + E +++++ E
Sbjct: 56 TSAGTLVLTAAAVFMMGKFRALPARAESPMVLSEESATPEEKSEESSPLSE--------- 106
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
N + AL+++++ +++ + EA+ V++RL+ +P EW+ L A++
Sbjct: 107 -----FLENSEALGALKSVLQQKLEDGEDGEALKVLERLVSAQPEVVEWKFLMARLLGEM 161
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
GE++ A FEEIL +PL EA G + D + + V +R+E A+ + E K +
Sbjct: 162 GETDRARDVFEEILASNPLSFEALFGNALLMDQCGEG-DAVIRRLEDALRTAENENKLKE 220
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
RD +L++AQ++ + EALR YEEL KE+P DFRPY C+G+IYTL + +EA +QF
Sbjct: 221 ARDVRLIMAQMQFLRKNVDEALRSYEELEKEDPSDFRPYFCKGMIYTLQDRNEEAREQFA 280
Query: 317 KFRRLVPRNHPYREYFVDNMVATKIFGEKVDRES 350
K+R P+ + + K+FG D ES
Sbjct: 281 KYRERSPKKFEVEGFLQTPLSRMKLFG--TDSES 312
>gi|297834748|ref|XP_002885256.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331096|gb|EFH61515.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 320
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 140/244 (57%), Gaps = 16/244 (6%)
Query: 105 PVAAAATVESTNESTKDTTSAREDVSYEEKEKEI---EQHLAANPNDIEALQTLMEVRIK 161
PV A + V +T E+ ++ EEK EI + L + P +E L++L++ +++
Sbjct: 83 PVKAESPVTTTEEAYQEVK--------EEKLSEIAPLSELLDSTPEAVETLRSLLQQKLE 134
Query: 162 SQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY- 220
+ EA+ +++RL+ +P+E EW+ L A++ G E A + FEEIL+++PL EA
Sbjct: 135 KGEDEEALKLLERLVTAQPDETEWKFLMARLLGEMGRPENARQMFEEILQRNPLSFEALF 194
Query: 221 -HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALR 279
+ L+M G V +R+E A+ + E + RD +L+IAQI ++ EAL+
Sbjct: 195 ENALLMDRSGEGAA---VLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALK 251
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVAT 339
YE+L KE+P+DFRPY C+G+IY+LL K EA++QF K+R L P+ Y +
Sbjct: 252 SYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRTPLSKM 311
Query: 340 KIFG 343
K+FG
Sbjct: 312 KLFG 315
>gi|148908023|gb|ABR17131.1| unknown [Picea sitchensis]
Length = 459
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 175/344 (50%), Gaps = 42/344 (12%)
Query: 36 TPPSSSPFKFSCIRASSSPASQQNPKP-------SLLRTLTPL------SSPLIKITSVT 82
P ++ P C R + S+QNP L R +T + S+PL +
Sbjct: 75 NPETNFPSWRGCTRPTEEACSKQNPNQFLGFNNNKLARLVTNIFGDWSDSAPLEAKQRIR 134
Query: 83 VAAAALLFMRL-----PFHS--IKPAIA---------APVAAAATVESTNESTKDTTSAR 126
AA L F+S +PA+A +P A AT +S + T D T
Sbjct: 135 EAATLFLLTGFLVVFNAFNSRLCRPALACGGGPCCCPSPPATTAT-DSASSQTNDFTIPT 193
Query: 127 EDVSYEEKEKEIE---------QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
+E E E + ++L +PND+ +L+ L+ R+ + + AV+ +DR++
Sbjct: 194 PTTQLKEGEGEGDVDVGEALAVEYLKTHPNDMSSLKILLHNRMIKRDIQGAVETLDRMML 253
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV 237
+EP E EW+ LKAQ Y G+ + A +E IL+ P A GL M S ++ + +
Sbjct: 254 VEPYEIEWKSLKAQAHYYLGDMKEARHTYERILKFSPFSPGALQGLAMVMQKSGEE-DAI 312
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
+ +E+ E K +++ +LL+ + ++E K+ EAL Y+++VKE+P DFRPY
Sbjct: 313 VPMLAGTLEKALSENKVKEVQTLRLLLGEYYLLEKKYQEALMNYQDVVKEDPEDFRPYFW 372
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKI 341
QGIIY++L KKDEA KQFEK+R+L ++ P + +DN+++ KI
Sbjct: 373 QGIIYSILEKKDEASKQFEKYRQLA-KDFP-DQNLLDNLMSAKI 414
>gi|326505492|dbj|BAJ95417.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522963|dbj|BAJ88527.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 390
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 180/356 (50%), Gaps = 41/356 (11%)
Query: 18 FNHHRPSFPKSISFISLRTPPSSSPFKFSCI-----RASSSPASQQNPKPSLLRTLTPLS 72
+ H+P+ S+ F T P SP C+ R S+P+S + P +LL ++T S
Sbjct: 26 LSRHKPTTTPSLPF---PTNPHRSPA--CCLLPAERRRFSTPSSSKTPATNLLSSITAAS 80
Query: 73 SPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVS-- 130
L+ + V++ + +++ R P AT E + ED +
Sbjct: 81 RTLLFLLVVSILSLSVV-RRPLPSLAAPPPPTQQPQDATKGQQEEESDQGDQEEEDEAEW 139
Query: 131 YEEKEKEIE-----------------------QHLAANPNDIEALQTLMEVRIKSQKLVE 167
+ ++E+E+E + L+ +P D++AL+ ++ R++ +
Sbjct: 140 FRKEEEEVEAAWMQPSDEEEEEEDDDEVQMYLEVLSEDPGDVDALKCVLFARMRRKDWGG 199
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A+ +L E EP E EW+L++A + G+ A + F+E+L + PL V A HGL +
Sbjct: 200 ALRYAAQLREAEPGEVEWRLMEALLHELKGDIATAERLFQEVLAEKPLLVRALHGLALCM 259
Query: 228 DGSDKKLN--EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELV 285
K+L V + +EKA++ + E++ + R+ KLLIAQ+ V++ A L+
Sbjct: 260 H---KRLEGPTVFEMLEKALQLAESEERVPEERNIKLLIAQMHVVKGDLDVASEKLRTLI 316
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKI 341
E+PRDFRP+LCQGI+Y LL KK+EA++QF+ +R LVP P + + D +++ K+
Sbjct: 317 NEDPRDFRPHLCQGIVYALLDKKEEADEQFDVYRSLVPDEFPDKSFINDVILSAKV 372
>gi|326492734|dbj|BAJ90223.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 183/359 (50%), Gaps = 47/359 (13%)
Query: 18 FNHHRPSFPKSISFISLRTPPSSSPFKFSCI-----RASSSPASQQNPKPSLLRTLTPLS 72
+ H+P+ S+ F T P SP C+ R S+P+S + P +LL ++T S
Sbjct: 22 LSRHKPTTTPSLPFP---TNPHRSPA--CCLLPAERRRFSTPSSSKTPATNLLSSITAAS 76
Query: 73 SPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVS-- 130
L+ + V++ + +++ R P AT E + ED +
Sbjct: 77 RTLLFLLVVSILSLSVV-RRPLPSLAAPPPPTQQPQDATKGQQEEESDQGDQEEEDEAEW 135
Query: 131 YEEKEKEIE-----------------------QHLAANPNDIEALQTLMEVRIKSQKLVE 167
+ ++E+E+E + L+ +P D++AL+ ++ R++ +
Sbjct: 136 FRKEEEEVEAAWMQPSDEEEEEEDDDEVQMYLEVLSEDPGDVDALKCVLFARMRRKDWGG 195
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A+ +L E EP E EW+L++A + G+ A + F+E+L + PL V A HGL +
Sbjct: 196 ALRYAAQLREAEPGEVEWRLMEALLHELKGDIATAERLFQEVLAEKPLLVRALHGLALCM 255
Query: 228 DGSDKKLN--EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK---HSEALRVYE 282
K+L V + +EKA++ + E++ + R+ KLLIAQ+ V++ SE LR +
Sbjct: 256 H---KRLEGPTVFEMLEKALQLAESEERVPEERNIKLLIAQMHVVKGDLDVASEKLRTF- 311
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKI 341
+ E+PRDFRP+LCQGI+Y LL KK+EA++QF+ +R LVP P + + D +++ K+
Sbjct: 312 --INEDPRDFRPHLCQGIVYALLDKKEEADEQFDVYRSLVPDEFPDKSFINDVILSAKV 368
>gi|224138522|ref|XP_002322835.1| predicted protein [Populus trichocarpa]
gi|222867465|gb|EEF04596.1| predicted protein [Populus trichocarpa]
Length = 82
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/80 (78%), Positives = 73/80 (91%)
Query: 270 MESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYR 329
ME K+ +AL+VYEELVKEEPRDFR YLCQGIIYTLLRKKDEAEK+FE+F++LVP+NHPYR
Sbjct: 1 MEEKYLDALKVYEELVKEEPRDFRLYLCQGIIYTLLRKKDEAEKKFEQFKKLVPKNHPYR 60
Query: 330 EYFVDNMVATKIFGEKVDRE 349
EY VDNM ATK F +KV+RE
Sbjct: 61 EYLVDNMFATKFFSDKVERE 80
>gi|357134392|ref|XP_003568801.1| PREDICTED: uncharacterized protein LOC100837872 [Brachypodium
distachyon]
Length = 386
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 124/209 (59%), Gaps = 7/209 (3%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L+ +P D+ AL+ L+ R++ + A+ +L E +P E EW+L++A + G+
Sbjct: 170 LSTDPGDVSALKCLLFARMRRKDWAGALRYAAQLREADPGEVEWRLMEALLHELKGDLAE 229
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN--EVEKRIEKAMERCKKEKKKSDLRD 259
A + F+E+L + PL V A HGL + K+L V + +EKA++ E++ + R+
Sbjct: 230 AERLFQEVLAEKPLLVRALHGLALCMH---KRLEGPTVFEMLEKALQLAISEERVPEERN 286
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
KLLIAQ+ V++ A + L+ E+PRDFRP+LCQGI+Y LL KK+EA+ QF+ +R
Sbjct: 287 IKLLIAQMHVVKGDLDVASEKLQSLINEDPRDFRPHLCQGIVYALLDKKEEADVQFDTYR 346
Query: 320 RLVPRNHPYREYFVDNMVATKIFGEKVDR 348
LVP P + + D +++ K+ E DR
Sbjct: 347 SLVPDEFPDKSFINDVILSAKM--ESKDR 373
>gi|147784212|emb|CAN72842.1| hypothetical protein VITISV_000983 [Vitis vinifera]
Length = 475
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 144/276 (52%), Gaps = 18/276 (6%)
Query: 76 IKITSVT-VAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEK 134
IK ++ T V AA +FM F ++ +P+ + + E +++++ E
Sbjct: 217 IKTSAGTLVLTAAAVFMMGKFRALPARAESPMVLSEESATPEEKSEESSPLSE------- 269
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
N + L+++++ +++ + EA+ V++R++ +P EW+ L A++
Sbjct: 270 -------FLENSEALGXLKSVLQQKLEDGEDGEALKVLERIVSAQPEVVEWKFLMARLLG 322
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
GE++ A FEEIL +PL EA G + D + + V +R+E A+ + E K
Sbjct: 323 EMGETDRARDVFEEILASNPLSFEALFGNALLMDQCGEG-DAVIRRLEDALRTAENENKL 381
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
+ RD +L++AQ++ + EALR YEEL KE+P DFRPY C+G+IYTL + +EA +Q
Sbjct: 382 KEARDVRLIMAQMQFLRKNVDEALRSYEELEKEDPSDFRPYFCKGMIYTLQDRNEEAREQ 441
Query: 315 FEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRES 350
F K+R P+ + + K+FG D ES
Sbjct: 442 FAKYRERSPKKFEVEGFLQTPLSRMKLFG--TDSES 475
>gi|242087117|ref|XP_002439391.1| hypothetical protein SORBIDRAFT_09g005640 [Sorghum bicolor]
gi|241944676|gb|EES17821.1| hypothetical protein SORBIDRAFT_09g005640 [Sorghum bicolor]
Length = 345
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L+ +P D++AL+ + +++ A+ RL + EP+E EW+L+ AQ+ G+
Sbjct: 129 LSRSPGDVDALKGALYAKMRRADWGGALRYARRLRDAEPSEVEWRLMVAQLNELKGDLAE 188
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN--EVEKRIEKAMERCKKEKKKSDLRD 259
A F E+L ++PL V+A HGL + KKL V + +E A++ EK+ + R+
Sbjct: 189 AECQFRELLAQEPLLVQALHGLALCMQ---KKLEGPTVFEMLENALQLATSEKRVPEERN 245
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
KLLIAQ+ V+ + A + L+ E+PRDFR +LCQGI+Y LL +K++A+KQF+ +R
Sbjct: 246 IKLLIAQMHVVMGQLDVASEKLQNLINEDPRDFRSHLCQGIVYALLDRKEDADKQFDIYR 305
Query: 320 RLVPRNHPYREYFVDNMVATKI 341
LVP P + + D ++A ++
Sbjct: 306 SLVPDEFPDKSFISDVILAARM 327
>gi|356525008|ref|XP_003531119.1| PREDICTED: uncharacterized protein LOC100780000 [Glycine max]
Length = 293
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 128/217 (58%), Gaps = 5/217 (2%)
Query: 129 VSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL 188
++ EE + L N + AL++L++ +++ + EA+ ++ RLI +P+ +W+ L
Sbjct: 76 LNVEESLSPLSDLLETNAEALAALKSLLQQKLELGEDDEALAILKRLIAAQPDAADWKFL 135
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAME 246
A++ + G+S++A +EE+L +PL EA + L+M G + +R+E+A+
Sbjct: 136 AARLTAETGDSDSARGYYEEVLAANPLSFEALFENALLMDRCGEGEA---AMRRLEEALR 192
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
+++K + RD KL++AQI ++ EAL +Y +L KE+PRDFRPY C+G+IY+LL
Sbjct: 193 VAEEDKMAKEARDVKLIMAQIMFLQKNVDEALVIYNQLTKEDPRDFRPYFCRGMIYSLLD 252
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFG 343
+ +EA++QF K+R L P+ Y + K+F
Sbjct: 253 RNEEAKEQFAKYRELSPKKFEVDGYLRTPLSRMKLFS 289
>gi|356512243|ref|XP_003524830.1| PREDICTED: uncharacterized protein LOC100808986 [Glycine max]
Length = 288
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 122/203 (60%), Gaps = 5/203 (2%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L N + AL++L++ +++ + EA ++ RLI +P+ +W+ L A++ + G+ EA
Sbjct: 84 LETNTEALAALKSLLQQKLELGEDDEAFSILKRLIAAQPDAADWKFLAARLAAETGDVEA 143
Query: 202 AIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
A ++E+L +PL EA + L+M G + +R+E+A+ +++KK + RD
Sbjct: 144 ARGYYQEVLAANPLSFEALFENALLMDRCGEGEA---AMRRLEEALRVAEEDKKAKEARD 200
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
KL++AQI ++ EAL +Y +L KE+PRDFRPY C+G+IY+LL + +EA++QF K+R
Sbjct: 201 VKLIMAQITFLQKNVDEALGIYNQLTKEDPRDFRPYFCRGMIYSLLDRNEEAKEQFAKYR 260
Query: 320 RLVPRNHPYREYFVDNMVATKIF 342
L P+ Y + K+F
Sbjct: 261 ELSPKKFEVDGYLRTPLSRMKLF 283
>gi|224108155|ref|XP_002314740.1| predicted protein [Populus trichocarpa]
gi|222863780|gb|EEF00911.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 126/208 (60%), Gaps = 5/208 (2%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E L +N IE+L++L++ +++ + EA++++ +L+ +P EW+ L A++ +
Sbjct: 129 LEAFLESNAEAIESLKSLLQQKLEKGQDDEALNILKQLVSAQPEVTEWKFLMARLLNEMR 188
Query: 198 ESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
+ A FEEIL +PL EA + L+M G + V +R+ +A++ ++E K
Sbjct: 189 RVQDARNVFEEILVVNPLSFEALFENALLMERSGEG---DAVIRRLREALDIAEEENKVK 245
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ RD +L++AQI+ ++ EAL Y+EL E+P+DFRPY C+G+IY+LL + +EA++QF
Sbjct: 246 EARDVRLIMAQIQFLQKNVEEALESYQELSNEDPKDFRPYFCRGMIYSLLDRNEEAKEQF 305
Query: 316 EKFRRLVPRNHPYREYFVDNMVATKIFG 343
K+R L P+ Y ++ K+FG
Sbjct: 306 AKYRELSPKKFEVEGYLRTSLSRMKLFG 333
>gi|224101987|ref|XP_002312502.1| predicted protein [Populus trichocarpa]
gi|222852322|gb|EEE89869.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 127/208 (61%), Gaps = 5/208 (2%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
++ L +N IE+L++L++ ++++ + EA+ +I L+ +P EW+ L A++ + G
Sbjct: 3 LQAFLESNAEAIESLKSLLQQKLENGQDEEALKIIKLLVSAQPEVTEWKFLMARLLNETG 62
Query: 198 ESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
++ A FEEIL +PL EA + L+M G + V +R++ A++ ++E K
Sbjct: 63 RAQDARNVFEEILVANPLSFEALFENALLMDRCGEGEA---VIRRLQGALDIAEEENKVK 119
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ RD +L++AQI ++ EAL+ Y+EL KE+P DFRPY C+G+IY+LL + +EA++QF
Sbjct: 120 EARDVRLIMAQIHFLQKNVEEALKSYQELSKEDPEDFRPYFCRGMIYSLLDRNEEAKEQF 179
Query: 316 EKFRRLVPRNHPYREYFVDNMVATKIFG 343
K+R L P+ Y ++ K+FG
Sbjct: 180 AKYRELSPKKFEVEGYLRTSLSRMKLFG 207
>gi|115462437|ref|NP_001054818.1| Os05g0182100 [Oryza sativa Japonica Group]
gi|57900694|gb|AAW57819.1| unknow protein [Oryza sativa Japonica Group]
gi|113578369|dbj|BAF16732.1| Os05g0182100 [Oryza sativa Japonica Group]
gi|215678653|dbj|BAG92308.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741017|dbj|BAG97512.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 396
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 116/200 (58%), Gaps = 1/200 (0%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L+ +P D++AL+ + +++ + A+ RL E EP E EW+L++A + G+
Sbjct: 180 LSRDPGDVDALKCALFAKMRRAEWGGALGFARRLREAEPGEVEWRLMEALLHELKGDLAE 239
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A + F E+L + PL V A HGL + + E +EKA++ ++ + R+ K
Sbjct: 240 AERLFNEVLAEKPLLVRALHGLALCMHKRSEGPTVFEM-LEKALQLAISGERVPEERNIK 298
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
LLIAQ+ V++ + A + L+ E+PRDFRP+LCQGI+Y LL KK+EA++ F+ +R L
Sbjct: 299 LLIAQMHVVKGQLDVASEKLQNLINEDPRDFRPHLCQGIVYALLDKKEEADELFDTYRSL 358
Query: 322 VPRNHPYREYFVDNMVATKI 341
VP P + + D + A ++
Sbjct: 359 VPDEFPDKSFISDVIQAARV 378
>gi|218196211|gb|EEC78638.1| hypothetical protein OsI_18722 [Oryza sativa Indica Group]
Length = 396
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 116/200 (58%), Gaps = 1/200 (0%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L+ +P D++AL+ + +++ + A+ RL E EP E EW+ ++A + G+
Sbjct: 180 LSRDPGDVDALKCALFAKMRRAEWGGALGFARRLREAEPGEVEWRFMEALLHELKGDLAE 239
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A + F E+L + PL V A HGL + + E +EKA++ E++ + R+ K
Sbjct: 240 AERLFNEVLAEKPLLVRALHGLALCMHKRSEGPTVFEM-LEKALQLAISEERVPEERNIK 298
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
LLIAQ+ V++ + A + L+ E+PRDFRP+LCQGI+Y LL KK+EA++ F+ +R L
Sbjct: 299 LLIAQMHVVKGQLDVASEKLQNLINEDPRDFRPHLCQGIVYALLDKKEEADELFDTYRSL 358
Query: 322 VPRNHPYREYFVDNMVATKI 341
VP P + + D + A ++
Sbjct: 359 VPDEFPDKSFISDVIQAARV 378
>gi|195632068|gb|ACG36692.1| hypothetical protein [Zea mays]
Length = 369
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 165/350 (47%), Gaps = 38/350 (10%)
Query: 28 SISFISLRTPPSSSPFKFSCIRASSSPASQQNP-KPSLLRT-LTPLSSPLIK-------- 77
++SF S T PSSS R ++ S P KP R L PL S I+
Sbjct: 2 AMSFFSPTTTPSSSASLLPTRRQCATGPSVSFPLKPHRFRVHLKPLRSSRIRTLSTSSLK 61
Query: 78 ------ITSVTVAAAALLFMRLP-FHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVS 130
++SV + LLF+ + S+ + P A A + + ++E
Sbjct: 62 IPTESILSSVVSTSRTLLFVLVAGLLSLSGVRSLPALACAPAPTQQPQETEEQESKEKKQ 121
Query: 131 YEEKEKEIEQHL--------------------AANPNDIEALQTLMEVRIKSQKLVEAVD 170
EE ++ E L + N D++AL+ + +++ A+
Sbjct: 122 QEEADERKEDVLPQLDEEDEEDDEVRMYSAILSRNSGDVDALKCALYAKMRRADWGGALR 181
Query: 171 VIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS 230
RL + EP+E EW+L+ AQ+ G+ A + F E+L ++PL V A HGL +
Sbjct: 182 YARRLRDAEPSELEWRLMVAQLHELKGDLAEAERHFRELLAEEPLFVRALHGLALCMQKK 241
Query: 231 DKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR 290
+ V + +E A++ E++ + R+ KLLIAQ+ V+ + A + L+ E+PR
Sbjct: 242 PEG-PAVFEMLENALQLATSERRVPEERNIKLLIAQMHVVMGQLDVASEKLQNLINEDPR 300
Query: 291 DFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
DFR +LCQGI+Y LL +K++A+ QF+ +R LVP P + + D ++A +
Sbjct: 301 DFRSHLCQGIVYALLDRKEDADMQFDIYRSLVPDEFPDKSFISDVILAAR 350
>gi|302763931|ref|XP_002965387.1| hypothetical protein SELMODRAFT_406722 [Selaginella moellendorffii]
gi|300167620|gb|EFJ34225.1| hypothetical protein SELMODRAFT_406722 [Selaginella moellendorffii]
Length = 355
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 126/231 (54%), Gaps = 8/231 (3%)
Query: 108 AAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANP----NDIEALQTLMEVRIKSQ 163
A + S NE+ TT+ + EK+K + + +D+ L ME R
Sbjct: 105 AEEAIASANENVATTTAMEQKEGAPEKKKTLRRRTQEEEEEILDDLTRLHGFMEKR---- 160
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
+ A+ V+ +LI++ P++ E++ ++ Y G+ + A+K FE+ ++ DPL + A GL
Sbjct: 161 DMPAAIKVLSKLIDMNPSQLEFRFIRGHAYEYIGDLDNALKEFEDAVKVDPLSLRALQGL 220
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEE 283
+ K ++ ++K +E A + +E + D R+F++L Q+ ++ + +AL +YE+
Sbjct: 221 ALVLKKQGKDIDFIQKIVEDAAAKATEEDRPKDARNFRMLKGQLLTLKEELPQALELYEQ 280
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
L KE+P DFRP++CQG++ +L + D+AE+ F F + P+ + RE D
Sbjct: 281 LSKEDPTDFRPHVCQGLVCCMLGELDQAEEHFSNFEKYCPQYYEGREAIED 331
>gi|302790934|ref|XP_002977234.1| hypothetical protein SELMODRAFT_417125 [Selaginella moellendorffii]
gi|300155210|gb|EFJ21843.1| hypothetical protein SELMODRAFT_417125 [Selaginella moellendorffii]
Length = 354
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
Query: 108 AAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANP----NDIEALQTLMEVRIKSQ 163
A + S NE+ TT+ + EK+K + + +D+ L ME R
Sbjct: 104 AEEAIASANENVATTTAVEQKEGAPEKKKTLRRRTQEEEEEILDDLTRLHGFMEKR---- 159
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
+ A+ V+ +LI++ P++ E++ ++ Y G+ + A+K FE+ ++ DPL + A GL
Sbjct: 160 DMPAAIKVLSKLIDMNPSQLEFRFIRGHAYEYIGDLDNALKEFEDAVKVDPLSLRALQGL 219
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEE 283
+ K ++ ++K +E A + +E + D R+F++L Q+ ++ + +AL +YE+
Sbjct: 220 ALVLKKQGKDIDFIQKIVEDAAAKATEEDRPKDARNFRMLRGQLLTLKEELPQALELYEQ 279
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE 330
L KE+P DFRP++CQG++ +L + D+AE+ F F + P+ + RE
Sbjct: 280 LSKEDPTDFRPHVCQGLVCCMLGELDQAEEHFSNFEKYCPQYYEGRE 326
>gi|212722684|ref|NP_001131681.1| uncharacterized protein LOC100193041 [Zea mays]
gi|194692232|gb|ACF80200.1| unknown [Zea mays]
gi|413944649|gb|AFW77298.1| hypothetical protein ZEAMMB73_253433 [Zea mays]
Length = 371
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 1/199 (0%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L+ N D++AL+ + +++ A+ L + EP+E EW+L+ AQ+ G+
Sbjct: 155 LSRNSGDVDALKCALYAKMRRADWGGALRFARLLRDAEPSELEWRLMVAQLHELKGDLAE 214
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A + F E+L ++PL V A HGL + + V + +E A++ E++ + R+ K
Sbjct: 215 AERHFRELLAEEPLLVRALHGLALCMQKKPEG-PAVFEMLENALQLATSERRVPEERNIK 273
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
LLIAQ+ V+ + A + L+ E+PRDFR +LCQGI+Y LL +K++A+ QF+ +R L
Sbjct: 274 LLIAQMHVVMGQLDVASEKLQNLINEDPRDFRSHLCQGIVYALLDRKEDADMQFDVYRSL 333
Query: 322 VPRNHPYREYFVDNMVATK 340
VP P + + D ++A +
Sbjct: 334 VPDEFPDKSFISDVILAAR 352
>gi|222630429|gb|EEE62561.1| hypothetical protein OsJ_17360 [Oryza sativa Japonica Group]
Length = 407
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 120/214 (56%), Gaps = 14/214 (6%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L+ +P D++AL+ + +++ + A+ RL E EP E EW+L++A + G+
Sbjct: 176 LSRDPGDVDALKCALFAKMRRAEWGGALGFARRLREAEPGEVEWRLMEALLHELKGDLAE 235
Query: 202 AIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLN------------EVEKRIEKAMER 247
A + F E+L + PL V A H LV+A+ + + V + +EKA++
Sbjct: 236 AERLFNEVLAEKPLLVRALHIAELVLAFSNVEGFVGLALCMHKRSEGPTVFEMLEKALQL 295
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
++ + R+ KLLIAQ+ V++ + A + L+ E+PRDFRP+LCQGI+Y LL K
Sbjct: 296 AISGERVPEERNIKLLIAQMHVVKGQLDVASEKLQNLINEDPRDFRPHLCQGIVYALLDK 355
Query: 308 KDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKI 341
K+EA++ F+ +R LVP P + + D + A ++
Sbjct: 356 KEEADELFDTYRSLVPDEFPDKSFISDVIQAARV 389
>gi|5042163|emb|CAB44682.1| putative protein [Arabidopsis thaliana]
gi|7270931|emb|CAB80610.1| putative protein [Arabidopsis thaliana]
Length = 290
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 133/242 (54%), Gaps = 22/242 (9%)
Query: 60 PKPSLLRTLTPLSSPLIKITSVTVAAAALL---FMRLPFHSIKPAIAAPVAAAATVESTN 116
P L+R+ T L S + + AA LL F+ L F S KPA+A P ATV S
Sbjct: 58 PPLPLIRSSTSLLSSKDFVQMLARKAAILLVGSFVFLGFCSSKPALALP---TATVVSQA 114
Query: 117 ESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLI 176
E E EK E+ L P ++EA++ ++ +++ K +AV +++L+
Sbjct: 115 EL--------------EDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLM 160
Query: 177 ELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE 236
+LEP+E EW+LL+A GE A + +++IL++ PL + A HGL M +
Sbjct: 161 KLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD--TS 218
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
V + +AME ++ + ++ R+ ++LI Q+ ++E + E L++++++V + PRDFRPYL
Sbjct: 219 VFDMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYL 278
Query: 297 CQ 298
CQ
Sbjct: 279 CQ 280
>gi|224101985|ref|XP_002312501.1| predicted protein [Populus trichocarpa]
gi|222852321|gb|EEE89868.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 175/328 (53%), Gaps = 26/328 (7%)
Query: 30 SFISLRTPPS---SSPFKFSCIR--ASSSPASQQNPKPS-----LLRTLTPLSSPLIKIT 79
SFI L+TP S SP + ++ S+S S + PK + + +PL+ L +T
Sbjct: 8 SFIHLKTPSSFNSPSPLHSTTLKFHNSTSTPSLKIPKAAASSSSNHTSKSPLTQKLKTLT 67
Query: 80 --SVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKE 137
++ + AA + + P + PA A AA T ++ ++ + D S
Sbjct: 68 KTAILIGVAASIAGKFP---VLPA-KAETPAALTEQNPALEEEEEEENQSDPS-----TP 118
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
++ L +N IE+L++L+ ++++ + EA+ +I L+ +P W+ L A++ S G
Sbjct: 119 LQAFLESNAEAIESLKSLLLQKLENGQDEEALKIIKLLVSAQPEVTGWKFLMARLLSEMG 178
Query: 198 ESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
+ A FEEIL +PL EA + L+M G + V +R+++A++ +E K
Sbjct: 179 RVQDARNVFEEILVYNPLSFEALFENALLMDRCGEGEA---VIRRLQEALDIAGEENKVK 235
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ R+ +L++AQI ++ +AL+ Y+EL KE+P+DF PY C+G+IY+LL + +EA++QF
Sbjct: 236 EARNVRLIMAQIHFLQKNVEKALKSYQELSKEDPKDFGPYFCRGMIYSLLDRNEEAKEQF 295
Query: 316 EKFRRLVPRNHPYREYFVDNMVATKIFG 343
K+R L P+ Y ++ K+FG
Sbjct: 296 AKYRELSPKKFEVEGYLRTSLSRMKLFG 323
>gi|356560713|ref|XP_003548633.1| PREDICTED: uncharacterized protein LOC100811556 [Glycine max]
Length = 446
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 175 LIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKL 234
LI +P+ +W+ L A++ + G+S++ ++E+L +PL EA + D +
Sbjct: 152 LIAAQPDAADWKFLTARLTAETGDSDSTRDYYKEVLIVNPLSFEALFENALPMDQCGEG- 210
Query: 235 NEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRP 294
+R+E+A+ +EK ++RD KL++ QI ++ EAL +Y +L KE+PRDFRP
Sbjct: 211 EAAMRRLEEALHMAAEEKMVKEVRDVKLIMVQIMFLQKNVDEALMIYNQLTKEDPRDFRP 270
Query: 295 YLCQGIIYTLLRKKDE----AEKQFEKFRRLVPRNHPYREYFVDNMVATKI 341
Y C+G+IY LL + +E A FE R++ R HP V MV +
Sbjct: 271 YFCRGMIYILLDRNEEVKTLATVDFEDSNRVLIRPHPAIWRLVHGMVVAYL 321
>gi|224101981|ref|XP_002312499.1| predicted protein [Populus trichocarpa]
gi|222852319|gb|EEE89866.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 93/156 (59%), Gaps = 5/156 (3%)
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMER 247
A++ S G + A FEEIL +PL EA + L+M G + V +R++ A++
Sbjct: 2 ARLLSEMGRVQDARNVFEEILVYNPLSFEALFENALLMDRCGEGEA---VIRRLQGALDI 58
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+E K + RD +L++AQ+ ++ +AL+ Y+EL KE+P DFRPY C+G+IY+LL +
Sbjct: 59 AGEENKVKEARDVRLIMAQMHFLQKNVEKALKSYQELSKEDPEDFRPYFCRGMIYSLLDR 118
Query: 308 KDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFG 343
+EA++QF K+R L P+ Y ++ K+FG
Sbjct: 119 NEEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFG 154
>gi|254415674|ref|ZP_05029433.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196177624|gb|EDX72629.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 297
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 119/226 (52%), Gaps = 9/226 (3%)
Query: 110 ATVESTNESTKDTTSAREDVSYEEKEKEIEQH------LAANPNDIEALQTLMEVRIKSQ 163
+ VES S T +A+ +S E++++ EQ L P + AL+ L+E +++
Sbjct: 31 SVVESNQPSAVSTPNAQPSLSTEQQDQLEEQAKGYELVLQREPQNQTALRGLLEAKLRLG 90
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
+ A+ ++ L EL P++ E+ +L AQ + G+ E A + + +IL P + A GL
Sbjct: 91 DVEGAIAPLETLAELNPDQPEYGVLLAQAKEQTGDREGAAQAYRQILASQPGDINALKGL 150
Query: 224 VMAY---DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRV 280
Y + + + +++ I+ A ++ + + + D+ KLL+ ++ + + + +E L +
Sbjct: 151 AALYIQQNRPEAAIGLLQETIKNAGQQNQTQPGRVDVSSVKLLLGEVYLSQQRFTETLTI 210
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
Y+EL++E P+DFRP L + +I K +EA+ F L P+ +
Sbjct: 211 YDELIEENPQDFRPVLAKALILRQQGKTEEAKPLFTTAVSLAPQEY 256
>gi|428202826|ref|YP_007081415.1| hypothetical protein Ple7327_2572 [Pleurocapsa sp. PCC 7327]
gi|427980258|gb|AFY77858.1| hypothetical protein Ple7327_2572 [Pleurocapsa sp. PCC 7327]
Length = 278
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 129/251 (51%), Gaps = 17/251 (6%)
Query: 88 LLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPN 147
L+ + L SI P +++ +A A V N S+ +T A + + E K + L P+
Sbjct: 18 LMLLALISFSILPLVSS-IAQEARV--LNGSSSKSTQAEK--ALETKALGYQLVLEREPD 72
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
+ AL+ L+EVR++ L +A++ +++L L P + ++ +L AQ + G+ E AI +
Sbjct: 73 NQNALEGLLEVRLQQGDLKKAIEPLEKLARLNPQQTDYTILLAQAKQQVGDYEGAIAAYR 132
Query: 208 EILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD------LR 258
IL P ++A G L++A + + ++ V+K + +E K K+D +
Sbjct: 133 NILASQPTDIQALKGVTDLLLAQNRGGEAVSLVQKTL---VEAIKDRAAKTDSVEAVNVT 189
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+LL+ +I + + ++SEAL VYE+ +K DFRP L + +I K EAE F++
Sbjct: 190 SLQLLLGEIYIEQERYSEALAVYEQAIKSNGEDFRPLLAKALILQKQGKNAEAEPIFDRA 249
Query: 319 RRLVPRNHPYR 329
L P + R
Sbjct: 250 VALAPVQYKDR 260
>gi|224120584|ref|XP_002318366.1| predicted protein [Populus trichocarpa]
gi|222859039|gb|EEE96586.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 58/90 (64%), Gaps = 20/90 (22%)
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
V KRIE AM++C+KEKK SD RDF LL+AQ++VME YL
Sbjct: 13 VLKRIESAMDKCRKEKKNSDSRDFMLLVAQVRVMEE--------------------MSYL 52
Query: 297 CQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
CQGII TLLR KDEAEK+ E+F +LVP+NH
Sbjct: 53 CQGIICTLLRNKDEAEKRSEQFEKLVPKNH 82
>gi|411117524|ref|ZP_11390011.1| hypothetical protein OsccyDRAFT_1454 [Oscillatoriales
cyanobacterium JSC-12]
gi|410713627|gb|EKQ71128.1| hypothetical protein OsccyDRAFT_1454 [Oscillatoriales
cyanobacterium JSC-12]
Length = 299
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 125/253 (49%), Gaps = 7/253 (2%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPV-AAAATVESTNESTKDTTSAREDVSYEEKEK 136
I SV + A L F+ + S+ P ++ A +T ++ T + + A E + K
Sbjct: 9 IVSVVMGLAFLAFVGI---SVAPLLSGFFQAGPSTATNSPAPTTNASPAARKAELEAQAK 65
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
E L P + AL+ L+E R+ + A+ +++L++L PNE + +L AQ +
Sbjct: 66 GYELVLQREPENPTALRGLLEARLALNDVRGAIAPLEKLVKLNPNESLYAVLLAQAKQQT 125
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKEKK 253
G+ E A + + E+L+ P A GLV+ + + ++ ++ ++ A + + +
Sbjct: 126 GDHEGAAQTYREVLKTKPGDTNALSGLVVLLVQQNRPEAAISLLQDTLKTATQANQVQPN 185
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
D+ ++L++ + V + ++ EA+ +Y+E+ K +DFRP + + ++ K +EA+
Sbjct: 186 SIDVATVQMLLSDVYVSQKRYDEAVAIYDEVAKVNKQDFRPVVGKAMVLKQQGKVEEAKS 245
Query: 314 QFEKFRRLVPRNH 326
F K L P +
Sbjct: 246 LFTKAAELAPAKY 258
>gi|428315868|ref|YP_007113750.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428239548|gb|AFZ05334.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 303
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 32/239 (13%)
Query: 112 VESTNESTKDTTSAREDVSYEEKEKEIEQHLAAN--------PNDIEALQTLMEVRIK-- 161
++++ ++ T + + EK+ E+ Q A P+++ AL+ L++VR++
Sbjct: 36 LKASQAQSQSTPTPTQTAQSGEKQSELLQAQARGYELVLQREPDNVTALRGLLQVRLELI 95
Query: 162 SQKLVEAVDVI---DRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
Q + + D I ++L L P E+ +L AQ + G+ E A + + IL P ++
Sbjct: 96 GQGVGDIKDAIAPLEKLASLNPETTEYGILLAQAKERTGDREGAAQAYRSILASKPGEIK 155
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS-----------DLRDFKLLIAQI 267
A GLV L V++R E A+ + K + D+ +L++ Q+
Sbjct: 156 ALQGLV--------NLLLVQQRPEAAIGLLQDTLKAAPAANLAKPESVDVTSVQLILGQV 207
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++ ++ EA+ +Y+E K P+DFRP L + I+ K DEA+ F++ +L P N+
Sbjct: 208 YAVQKRYEEAIAIYDESAKANPKDFRPTLGKAIVLKEQGKTDEAKTLFDRATQLAPPNY 266
>gi|443327564|ref|ZP_21056186.1| hypothetical protein Xen7305DRAFT_00020010 [Xenococcus sp. PCC
7305]
gi|442792823|gb|ELS02288.1| hypothetical protein Xen7305DRAFT_00020010 [Xenococcus sp. PCC
7305]
Length = 264
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 113/236 (47%), Gaps = 7/236 (2%)
Query: 80 SVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIE 139
V + +LF + F + P + + V + N SA+E+ E + +
Sbjct: 8 GVYIVLVVMLFSLIIFSGL-PLVGSIVQETKILAQDNAQQVARISAQENAKLEAEASGYQ 66
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES 199
+ L P + AL+ L+ +R++ Q L+ A+ ++ L + PN E+ +L Q + YA +
Sbjct: 67 KVLDREPENETALRELLSIRLQQQDLLGAIAPLETLATIHPNIIEYAILLGQTKQYAEDY 126
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
E A + +L PL V A GLV + + ++ + ++ + +A E ++ D
Sbjct: 127 EGAASAYRNVLAAAPLNVMALGGLVNLFLTQNLPERAIALLQNTLTQAQEANAQDNPNVD 186
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L +LL+ +I E K+++A+ +Y+E+ DFRP + + LL+K+ + E
Sbjct: 187 LSSIQLLLGEIYTEEEKYADAITLYDEIAAAHESDFRPIFAKAL---LLKKQGDIE 239
>gi|427734860|ref|YP_007054404.1| Tfp pilus assembly protein PilF [Rivularia sp. PCC 7116]
gi|427369901|gb|AFY53857.1| Tfp pilus assembly protein PilF [Rivularia sp. PCC 7116]
Length = 287
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 9/223 (4%)
Query: 113 ESTNESTKDTTSARED-VSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEA--- 168
+S N ST SA E E K EQ L P + ALQ L+E R++ +L +
Sbjct: 38 QSGNTSTDTGNSAAEQKAKLELTAKGYEQVLEREPENQTALQGLLEARLQLLRLGQGDIK 97
Query: 169 --VDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV-- 224
++ +++L +L P E + +L AQ + G+ E A + + +L P + A G+V
Sbjct: 98 GVINPLEKLSKLNPEETRYAVLLAQAKQQTGDKEGAAQAYRTVLETKPGDLPALQGMVAL 157
Query: 225 -MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEE 283
+ + + +E+ + KA + K E D ++L+ + E ++++AL Y++
Sbjct: 158 LLEQKRPEAAIGLLEESLNKAEKANKIEPNSVDTTAVQVLLGNVYAKEKRYAQALSAYDK 217
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++K +P+DFRP L + ++ K +EA+ F K L P +
Sbjct: 218 VIKNDPKDFRPVLAKAMVLKDQGKTEEAQPLFTKAASLAPARY 260
>gi|126656202|ref|ZP_01727586.1| hypothetical protein CY0110_03929 [Cyanothece sp. CCY0110]
gi|126622482|gb|EAZ93188.1| hypothetical protein CY0110_03929 [Cyanothece sp. CCY0110]
Length = 285
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 122/241 (50%), Gaps = 19/241 (7%)
Query: 84 AAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYE---EKEKEIEQ 140
A L+ + L SI P +++ V A +S+ +TK T E + Y+ E+E
Sbjct: 14 ATLVLMLLALISFSILPIVSSMVQAQQADQSSLVTTKSTRLKNEALGYQLVLERE----- 68
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
P++ AL L+E R++ L A+ ++RL +L P + ++ +L AQ Q E
Sbjct: 69 -----PDNENALLGLLETRLRQGDLEAAITPLERLAQLNPEQPDYGILLAQSQQQLNNYE 123
Query: 201 AAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKS-- 255
AA+ ++EI+ +P + A G+V M + S +N V+ + +A++ E
Sbjct: 124 AALNTYQEIIAANPGDMRALKGMVDLYMNQNRSQAAINLVQNTLNEAIKEQSNESASESV 183
Query: 256 -DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
+L +LL+ +I + ++ +AL +Y++ +K + DFRP L +G++ +++EA+
Sbjct: 184 FNLTSLQLLLGEIYSEQERYDDALVIYDQAIKGDKDDFRPLLAKGMLLREQGEENEAQTL 243
Query: 315 F 315
F
Sbjct: 244 F 244
>gi|300864449|ref|ZP_07109320.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
gi|300337593|emb|CBN54468.1| tetratricopeptide TPR_2 [Oscillatoria sp. PCC 6506]
Length = 293
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 9/237 (3%)
Query: 97 SIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLM 156
SI P + + V A S + S TT A++ + + + E L P+++ AL+ L+
Sbjct: 24 SIAPIVDSIVKANQASSSPSPSPTQTTMAKQS-DLQGQARGYELVLQREPDNVTALRGLL 82
Query: 157 EVRI-----KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILR 211
+VR+ K ++ + + ++RL +L P E+ +L AQ + YAG+ E A + + +L
Sbjct: 83 QVRLELLQAKEGEIKDVITPLERLSKLNPENVEYSILLAQAKEYAGDREGAAQAYRSVLT 142
Query: 212 KDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIK 268
P V+A GLV + + + ++ ++ A + + D+ +L++ Q+
Sbjct: 143 VAPGDVKALQGLVNLLLKQQRPEAAIGLLQDTLKAAPAANQAKAGSVDVTSVQLILGQVY 202
Query: 269 VMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + EA+ +Y+E +K + +DFRP L + I+ K ++AE F K L P N
Sbjct: 203 AEQKRFDEAIVIYDEGIKADAKDFRPVLAKAIVLREQGKTEDAEGLFNKATELAPAN 259
>gi|334118807|ref|ZP_08492895.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333459037|gb|EGK87652.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 301
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 146 PNDIEALQTLMEVRIK--SQKLVEAVDVI---DRLIELEPNEFEWQLLKAQVQSYAGESE 200
P+++ AL+ L++VR++ Q + + D I ++L L P E+ +L AQ + G+ E
Sbjct: 77 PDNVTALRGLLQVRLELIGQGVGDIKDAIAPLEKLASLNPETTEYGILLAQAKERTGDRE 136
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS----- 255
A + + IL P ++A GLV L V++R E A+ + K +
Sbjct: 137 GAAQAYRSILASKPGEIKALQGLV--------NLLLVQQRPEAAIGLLQDTLKAAPAANL 188
Query: 256 ------DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
D+ +L++ Q+ ++ ++ EA+ +Y+E K P+DFRP L + I+ K D
Sbjct: 189 AKPESVDVTSVQLILGQVYAVQKRYEEAIAIYDESAKANPKDFRPTLGKAIVLKEQGKTD 248
Query: 310 EAEKQFEKFRRLVPRNH 326
EA+ F++ L P N+
Sbjct: 249 EAKTLFDRATELAPPNY 265
>gi|307150156|ref|YP_003885540.1| hypothetical protein Cyan7822_0215 [Cyanothece sp. PCC 7822]
gi|306980384|gb|ADN12265.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 283
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P + ALQ L+E R+K + A++ ++RL L P + E+ L AQ + + E A
Sbjct: 68 PENQTALQGLLEARLKQGDIKAAIEPLERLALLNPQQSEYTFLLAQAKERVEDFEGASAA 127
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKEKK---KSDLRD 259
+ IL P ++ A GLV ++ + EV+ + KA+ E + DL
Sbjct: 128 YRAILAAYPGQMMALKGLVDLLSAQNRFSDAVGEVQAALSKAISLQSDEAETPSNVDLTA 187
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
+LL+ +I V + K+ EAL VY+E K +P+DFRP L Q + K E++ FE+
Sbjct: 188 LQLLLGEIYVKQKKYPEALAVYQEASKFDPKDFRPVLAQAFVLKEQGKTTESQPLFEQAV 247
Query: 320 RLVPRNH 326
L P +
Sbjct: 248 TLAPVQY 254
>gi|357520631|ref|XP_003630604.1| hypothetical protein MTR_8g101290 [Medicago truncatula]
gi|355524626|gb|AET05080.1| hypothetical protein MTR_8g101290 [Medicago truncatula]
Length = 294
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 145/319 (45%), Gaps = 57/319 (17%)
Query: 1 MESLAKLHGGHQPLSLSFNHHRPSFPKSISFI---------------------------- 32
ME+LA LH HQPL S + S S F+
Sbjct: 1 MEALASLHHRHQPLCSSLHPSLSSTTASSLFLSQPSPSTSPSSSIRALSSPSPPSSESLQ 60
Query: 33 SLRTPPSSSPFKFS-CIRASSSPASQQNPKPSLLRTLTPLSSPLIKITSVTVAAAALLFM 91
+L+ P + P F+ ++ + +QNP+P + P+S +VTVAA+A LF+
Sbjct: 61 NLQYPETKIPQFFNPLVKVPNFDPPRQNPEPKSPQFFNPISK-FPSFVTVTVAASAFLFL 119
Query: 92 RLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEA 151
+ P+ + ++V S E D S +IE+ L P+ IE+
Sbjct: 120 ----GCCQNGFNKPITSLSSVVSVEEKALDEKS------------DIEEFLGNKPDHIES 163
Query: 152 LQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLLKAQVQSYAGESEAAIKGFEEIL 210
+ L K+ E + V+ +++ ++ E W++L+A+V S + E GFEEIL
Sbjct: 164 VLYL--------KMKERIRVVHSFKKIKTDDDEAWEVLRAEVVSCSENLELIKVGFEEIL 215
Query: 211 RKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD--LRDFKLLIAQIK 268
KD +++ G V+ Y + N + K I+ AM+RC++E + LR F ++ +I+
Sbjct: 216 EKDMDCNKSHQGRVLEYLEMVDECNGLLKGIKVAMDRCEREDADINRYLRLFGKVVDRIR 275
Query: 269 VMESKHSEALRVYEELVKE 287
V+E AL+ +++L +E
Sbjct: 276 VLEGDMVGALKYFKQLEQE 294
>gi|172036073|ref|YP_001802574.1| hypothetical protein cce_1158 [Cyanothece sp. ATCC 51142]
gi|354552876|ref|ZP_08972183.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
gi|171697527|gb|ACB50508.1| unknown [Cyanothece sp. ATCC 51142]
gi|353554706|gb|EHC24095.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
Length = 285
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 19/237 (8%)
Query: 88 LLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYE---EKEKEIEQHLAA 144
L+ + L S+ P +++ V A +S +T+ E + Y+ E+E
Sbjct: 18 LMLLALISFSVLPVVSSMVQAKQADQSGLVTTESKRLENEALGYQLVLERE--------- 68
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
P++ AL L+E R++ L A+ + RL +L P E ++ +L AQ Q + A
Sbjct: 69 -PDNENALLGLLETRLRQGNLEAAIAPLKRLAQLNPQEPDYAILLAQSQQQLNNYQEAFN 127
Query: 205 GFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKEKKKS---DLR 258
++E++ +P + A G+V Y + S +N V+ ++KA+ KE +L
Sbjct: 128 TYQEVIAANPGDMRALKGMVDLYLTQNRSQDAINLVQSTLDKAIAEQSKESTSENVFNLT 187
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+LL+ +I + ++ +AL +Y++ +KE+ DFRP L +G++ K++EA+ F
Sbjct: 188 SLQLLLGEIYSQQERYDDALVIYDQAIKEDKDDFRPLLAKGMLLREQGKENEAQTLF 244
>gi|409990012|ref|ZP_11273459.1| hypothetical protein APPUASWS_03918 [Arthrospira platensis str.
Paraca]
gi|291566886|dbj|BAI89158.1| TPR domain protein [Arthrospira platensis NIES-39]
gi|409939124|gb|EKN80341.1| hypothetical protein APPUASWS_03918 [Arthrospira platensis str.
Paraca]
Length = 294
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 8/235 (3%)
Query: 97 SIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLM 156
S+ P + + ++ N++ S + E++ + + L P++ AL+ +
Sbjct: 24 SMAPLLGGLLRTDSSESEPNQTAVSNISGAQLKDLEDQARGYQLVLQREPDNETALRGFL 83
Query: 157 EVRIK--SQKLVEAVDVID---RLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILR 211
+ + + SQ + DV++ RL +L P E+ +L AQ Q Y G+ EAA + + IL
Sbjct: 84 QAKFELISQGQGQVRDVVEPLQRLAQLHPETPEYGILLAQAQEYTGDPEAAAQSYRRILE 143
Query: 212 KDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIK 268
+ P V+A GLV ++ D + + +E ++ A + + + D +L++ Q+
Sbjct: 144 QRPGEVQALQGLVSLLISQDRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVY 203
Query: 269 VMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ ++ EA+ VY+E +K DFRP L + II D+AE F + L P
Sbjct: 204 AEQQRYQEAIAVYDEAIKNSESDFRPVLAKAIILRQQGNPDDAELLFAEAIDLAP 258
>gi|22298738|ref|NP_681985.1| hypothetical protein tll1195 [Thermosynechococcus elongatus BP-1]
gi|22294919|dbj|BAC08747.1| tll1195 [Thermosynechococcus elongatus BP-1]
Length = 281
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 117/248 (47%), Gaps = 11/248 (4%)
Query: 88 LLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVS-YEEKEKEIEQHLAANP 146
LL +PF +I ++ + +A T S +A + ++ + +EK + L P
Sbjct: 11 LLLGMIPFIAI--SVMPLLTSAFTPPQATPSPMARPAAGDKIAELQAQEKGYQLVLEREP 68
Query: 147 NDIEALQTLMEVRIKSQKLVEA-----VDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
N+ AL+ L+ R++ +L + +D + RL P + ++ +L Q Q G+ E
Sbjct: 69 NNATALEGLVLARLQLIQLGKGEIASVIDPLRRLSAQRPEQTDYAILLGQAQQQTGDREG 128
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKEKKKSDLR 258
A + F+ +L K P + A LV Y ++ + ++ ++ A + K + D+
Sbjct: 129 AAQTFQGVLAKSPGNLNALRALVDLYLKENRPQAAIGLIQDTLQGAEQANKVQPGSVDVT 188
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+LL+ + + + ++ EAL +++ L KE P DFRP L Q + T KK +A + K
Sbjct: 189 AVQLLLGDVYMTQKRYDEALTLFQNLGKENPNDFRPVLAQAMALTEQGKKTQAAALYAKA 248
Query: 319 RRLVPRNH 326
L P +
Sbjct: 249 VELAPAKY 256
>gi|428314146|ref|YP_007125123.1| hypothetical protein Mic7113_6123 [Microcoleus sp. PCC 7113]
gi|428255758|gb|AFZ21717.1| hypothetical protein Mic7113_6123 [Microcoleus sp. PCC 7113]
Length = 344
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 23/261 (8%)
Query: 73 SPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYE 132
SP + + V A + F +P I V S N + + T+A +
Sbjct: 33 SPWVNLVLVLAILAFVGFSMIPLLDI-------------VLSDNSPSSEATTASTPILPA 79
Query: 133 EKEKEIEQH-------LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW 185
+K+ E+E + P + AL+ L+E R+K + A+ ++++ +L P++ E+
Sbjct: 80 QKQAELEAQARGYELVVQREPQNPSALRGLLETRLKLGDIQGAIPPLEQMAKLNPDQTEY 139
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIE 242
+L AQ + G+ E A + + IL P ++A GLV Y + + ++ ++
Sbjct: 140 SVLLAQAKQQLGDKEGAAQTYRSILASKPGNLDALEGLVGLYVQQKRPEAAIGLLQDTLK 199
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
A + D+ +LL+ + E +++EA+ +Y+E +K +DFRP L + +I
Sbjct: 200 TATPINDMKPGTVDVISVQLLLGLVYANEKRYTEAIAIYDEAIKTNKQDFRPPLAKALIL 259
Query: 303 TLLRKKDEAEKQFEKFRRLVP 323
K EA+ F L P
Sbjct: 260 KEQGKVAEAKPLFTTAASLAP 280
>gi|218441401|ref|YP_002379730.1| hypothetical protein PCC7424_4498 [Cyanothece sp. PCC 7424]
gi|218174129|gb|ACK72862.1| Tetratricopeptide domain protein [Cyanothece sp. PCC 7424]
Length = 284
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 130/255 (50%), Gaps = 24/255 (9%)
Query: 83 VAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSARED--VSYE---EKEKE 137
+ +LF + F S+ P I++ A + S+N+ST ++ RE + Y+ E+E
Sbjct: 13 IGLFVMLFALVCF-SMAPLISSLFQARHS--SSNQSTVSVSNKRESEILGYQLVLERE-- 67
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
P++ ALQ L+ +++ L++ ++ ++RL L P + ++ L AQ +
Sbjct: 68 --------PDNQNALQGLLAAQLQQGNLLDVIEPLERLALLNPQQPDYTFLLAQTKQQLK 119
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
+ E A + +L P ++ A LV ++ + + +NEV+ +++A+ E +
Sbjct: 120 DYEGASSAYRRVLAAYPGQMIALKSLVDLLLSQNRFSEAINEVQSTLKQAIALKSDEVET 179
Query: 255 S---DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
D+ +LL+ +I V E+K+ EA+ +YE+ + +P+DFRP L +G++ K +A
Sbjct: 180 PYPIDITALQLLLGEIYVTEAKYPEAIAIYEQANQFDPKDFRPILAKGLVLKEEGKTTDA 239
Query: 312 EKQFEKFRRLVPRNH 326
+ FE+ L P +
Sbjct: 240 QPLFEQALTLAPVQY 254
>gi|220906314|ref|YP_002481625.1| hypothetical protein Cyan7425_0878 [Cyanothece sp. PCC 7425]
gi|219862925|gb|ACL43264.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 331
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 124/236 (52%), Gaps = 13/236 (5%)
Query: 88 LLFMRLPF--HSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAAN 145
L F +PF S+ P I A ++ + V S S TT+ R+ E +EK + L
Sbjct: 46 LFFGIIPFIATSVIPLIDA-ISTSRPVSSPTPSPTVTTANRK-AELEGQEKGYQAVLQRE 103
Query: 146 PNDIEALQTLMEVRIKS-----QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
P+++ AL+ L+ R++ K+ ++ +++L + +P+ ++ +L Q Q Y G E
Sbjct: 104 PDNVTALEGLVNTRLEMVQAGYAKIPTVIEPLEKLAKAKPDRTDYLVLLGQAQQYVGNRE 163
Query: 201 AAIKGFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIEK-AMERCKKEKKKSD 256
AA + F+ +L P ++A G L++ + + ++ I+K A++ + + D
Sbjct: 164 AAAQAFQNVLATKPGDIKALQGMASLLLQEQRPEAAIALLQDTIDKKAIKANQIQPGSVD 223
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
+ +LL+ ++ ++ EA+ ++++L+K++ DFRP + + +++T K +EA+
Sbjct: 224 ITAVQLLLGELYTNLRRYDEAIALFDQLIKKDKNDFRPVVAKAMVFTQQGKTEEAK 279
>gi|428304829|ref|YP_007141654.1| hypothetical protein Cri9333_1244 [Crinalium epipsammum PCC 9333]
gi|428246364|gb|AFZ12144.1| Tetratricopeptide TPR_2 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 294
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 114/240 (47%), Gaps = 9/240 (3%)
Query: 90 FMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDI 149
F LP S + P A A + + N S T + + K + LA P++
Sbjct: 24 FSILPLLSSVLKDSQPPAVAQSAPNQNTSLAQLTE------LQSQAKGYQLVLAREPDNP 77
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEI 209
AL+ L+E R++ + +++ +++L L P + ++ +L AQ + + G+ E A + + +
Sbjct: 78 TALRGLLEARLQLGDIKGSIEPLEKLAFLNPEQSDYMVLLAQAKQHLGDREVAAQTYRTV 137
Query: 210 LRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQ 266
L P + A GLV + + + +++ ++ A + + D +LL+AQ
Sbjct: 138 LAAKPGNMNALQGLVSLLLEQKRPEAAIGLLQETLKTAAQVNPSQPGTIDTTSVQLLLAQ 197
Query: 267 IKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+ + ++ EAL +Y+E +K + +DFRP L + ++ L K EA+ F L P +
Sbjct: 198 VYFNQERYVEALAIYDEAIKNDRQDFRPVLAKAMVLQKLGKNVEAKPLFTVAASLAPAQY 257
>gi|434399413|ref|YP_007133417.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428270510|gb|AFZ36451.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 270
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 104/200 (52%), Gaps = 3/200 (1%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ 186
+ + E + K ++ L PN+ AL+ L+ ++I+ Q L A+ +++L +L P + E+
Sbjct: 50 QQIQLEAEAKGYQKVLEREPNNQTALKGLLNIKIQQQDLQGAIVFLEKLAQLNPKQPEYF 109
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEK 243
+L AQ + + E A + +IL++D ++A G++ Y D + + ++ +++
Sbjct: 110 ILLAQAKQQTEDFEGAAAAYNQILKQDVANIQALSGIISLYLFQDLPQRAIAILQDTLKQ 169
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
+ + D+ KLL+ ++ +S+A ++YEE++ P+DFRP L + ++ +
Sbjct: 170 SQSSQTASENTIDIASIKLLLGEVYSQTEHYSDANQIYEEVIAANPQDFRPVLAKALVLS 229
Query: 304 LLRKKDEAEKQFEKFRRLVP 323
+ +A+ ++ L P
Sbjct: 230 KQGENSQAKTWLKQALSLAP 249
>gi|428214310|ref|YP_007087454.1| hypothetical protein Oscil6304_3996 [Oscillatoria acuminata PCC
6304]
gi|428002691|gb|AFY83534.1| hypothetical protein Oscil6304_3996 [Oscillatoria acuminata PCC
6304]
Length = 312
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 94/184 (51%), Gaps = 3/184 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+ AL+ L+E R+K Q + A+ +++L+ + P ++ +L AQ + G+ + A
Sbjct: 81 PNNETALRGLLETRLKLQDIPGAIAALEQLVAINPERTDYAVLLAQGKQQIGDRDGASTV 140
Query: 206 FEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
+ IL P + A G L++ + + +E ++ A + + + D+ ++
Sbjct: 141 YRSILETQPGNINALQGYVNLLLMESRPEAAIGLLEDTLKTAPQANQIQPGSIDVVSVQV 200
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
++ Q+ + ++ EA+ VY+E +K EP DFRP + I++ K EA+ FE +L
Sbjct: 201 ILGQVYADQLRYDEAIAVYDEAMKAEPEDFRPIYAKAIVWQNQGKMAEAKPLFETAAQLA 260
Query: 323 PRNH 326
P +
Sbjct: 261 PPQY 264
>gi|443323624|ref|ZP_21052628.1| hypothetical protein GLO73106DRAFT_00001250 [Gloeocapsa sp. PCC
73106]
gi|442786606|gb|ELR96335.1| hypothetical protein GLO73106DRAFT_00001250 [Gloeocapsa sp. PCC
73106]
Length = 248
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 112/225 (49%), Gaps = 15/225 (6%)
Query: 110 ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAV 169
+ V + + D + ++D+S ++ E L P++ AL+ L+++R+ L V
Sbjct: 26 SVVTQATQQSSDGLNQQKDLS--QRAMGYELVLEREPDNQTALKGLLDIRLSQGDLSAVV 83
Query: 170 DVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG---LVMA 226
+ L L P+ E+ +L AQ + G++E A + +E IL ++ V A G L++
Sbjct: 84 GPLSNLARLNPDRSEYGILLAQTKQQLGDNEGAKQVYESILAQNAGDVLALQGMINLLIP 143
Query: 227 YDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
+ S+ +N ++K + + + +L +LL+ Q+ + + +EA+ VY++++
Sbjct: 144 LEESETAINLIQKTL------SENQLSDDNLIGVQLLLGQVYALSDRPTEAIAVYDQMIT 197
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP-YRE 330
P+DFRP + + I+ LR + + E F + V P Y+E
Sbjct: 198 ANPQDFRPLVAKAIV---LRNQGDLETAISLFTQAVSLAPPRYQE 239
>gi|427712546|ref|YP_007061170.1| hypothetical protein Syn6312_1459 [Synechococcus sp. PCC 6312]
gi|427376675|gb|AFY60627.1| hypothetical protein Syn6312_1459 [Synechococcus sp. PCC 6312]
Length = 295
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 114/247 (46%), Gaps = 13/247 (5%)
Query: 88 LLFMRLPFH--SIKPAIAAPVAAAATVESTNESTKDTTSAREDVS-YEEKEKEIEQHLAA 144
L+ LPF S+ P I + T T S T A + V YE +E + L
Sbjct: 17 LVIGILPFLVISLAPLIGSIFRTGPTAPITTPS--PTAQAADTVKKYEAEETGYQAVLER 74
Query: 145 NPNDIEALQTLMEVRIK----SQKLVEAVDV-IDRLIELEPNEFEWQLLKAQVQSYAGES 199
P++I AL+ L+ R++ ++ VE + ++RL L P + ++ +L AQ Q AG+
Sbjct: 75 EPDNIAALEGLINARLQLIGLGKRPVETIITPLERLTTLNPTQPQYAVLLAQAQEQAGKP 134
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
E A + ++ +L K+P + A GL + + + L V+ I+ + + + +
Sbjct: 135 EEAARTYQTVLDKNPTNINALRGLAQLELKQERPEAALGLVQDAIQSLKAAPETPESQEN 194
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L L++ I + +++AL + +L ++ P DFRP L Q I K +A F
Sbjct: 195 LLAVNLILGDIYMSRQDYAQALTHFTQLAQDHPNDFRPILGQAIALKSEGKSADAAPLFN 254
Query: 317 KFRRLVP 323
+ L P
Sbjct: 255 QAVSLAP 261
>gi|16331053|ref|NP_441781.1| hypothetical protein slr1644 [Synechocystis sp. PCC 6803]
gi|383322795|ref|YP_005383648.1| hypothetical protein SYNGTI_1886 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325964|ref|YP_005386817.1| hypothetical protein SYNPCCP_1885 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491848|ref|YP_005409524.1| hypothetical protein SYNPCCN_1885 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437116|ref|YP_005651840.1| hypothetical protein SYNGTS_1887 [Synechocystis sp. PCC 6803]
gi|451815210|ref|YP_007451662.1| hypothetical protein MYO_119040 [Synechocystis sp. PCC 6803]
gi|1653548|dbj|BAA18461.1| slr1644 [Synechocystis sp. PCC 6803]
gi|339274148|dbj|BAK50635.1| hypothetical protein SYNGTS_1887 [Synechocystis sp. PCC 6803]
gi|359272114|dbj|BAL29633.1| hypothetical protein SYNGTI_1886 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275284|dbj|BAL32802.1| hypothetical protein SYNPCCN_1885 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278454|dbj|BAL35971.1| hypothetical protein SYNPCCP_1885 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961580|dbj|BAM54820.1| hypothetical protein BEST7613_5889 [Bacillus subtilis BEST7613]
gi|451781179|gb|AGF52148.1| hypothetical protein MYO_119040 [Synechocystis sp. PCC 6803]
Length = 290
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P+++ ALQ L+E+R++ + L A+ ++RL ++ ++ ++++L AQ+++ ++ A K
Sbjct: 67 PDNVNALQGLLEIRLQQKNLAAAIAPLERLGQIRTDQVQYRILLAQLKTQLEDNAGAAKV 126
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS-------DLR 258
+ EIL + P ++A GL Y ++ E ++ A+ + K + + L
Sbjct: 127 YREILTQSPHNIQALKGLSGLY-AQQERPAEAVAIVQNAITQAIKAQTGAPGTVPPDQLT 185
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+LL+ +I + +++ +A+ +YE K DFRP L Q + K EA+ F++
Sbjct: 186 SLQLLLGEIYLSQNRPDQAIAIYEAASKVNGNDFRPVLAQAQVMAQTGKVKEADPFFQQA 245
Query: 319 RRLVPRNH 326
L P +
Sbjct: 246 IMLAPVQY 253
>gi|434393110|ref|YP_007128057.1| tetratricopeptide repeat-containing protein [Gloeocapsa sp. PCC
7428]
gi|428264951|gb|AFZ30897.1| tetratricopeptide repeat-containing protein [Gloeocapsa sp. PCC
7428]
Length = 267
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Query: 75 LIKITSVTVAAAALLFMRLP-----FHSIKPAIAAPVAAAATVESTNESTKDTTSAREDV 129
I + V A + F LP F + +PA APV TN++ + T
Sbjct: 9 FISVVLVLAIIAFVGFSMLPLFSTAFRASQPAGEAPV--------TNQAQQQLT------ 54
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
E + E L P + AL+ L++ R++ L AV + +L L P E E+ LL
Sbjct: 55 ---EAARGYEVVLQREPENQTALRGLVKARLELLDLKGAVAPLQKLAALNPTEAEYNLLL 111
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
A ++ G+ E + IL +P ++A GL +++ E ++ ++ +
Sbjct: 112 ADIKQRLGDREGETTAYRSILATNPGNLQALEGLAN-IQLREQRPTEAIALLQNTLDNAQ 170
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ D+ +LL+AQ+ + ++EA+ +Y+EL+ +DFRP L + + K +
Sbjct: 171 -QADNIDVNAVRLLLAQVYATQQNYNEAIAIYDELISNNKQDFRPVLAKAMALKQQGKNE 229
Query: 310 EAEKQFEKFRRLVPRNHPYR 329
EA+ F+ L P + R
Sbjct: 230 EAKSLFDNAASLAPAQYKER 249
>gi|354568664|ref|ZP_08987827.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353539918|gb|EHC09398.1| Tetratricopeptide TPR_2 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 286
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 104/214 (48%), Gaps = 8/214 (3%)
Query: 121 DTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIK-----SQKLVEAVDVIDRL 175
+++S+ + E+ + EQ L P + AL+ L+E R++ + + ++ +++L
Sbjct: 49 NSSSSDQKAKLEDAARGYEQVLQREPENQTALRGLLETRLQLLSLGAGNIKAVIEPLEKL 108
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDK 232
+L P + + +L AQ + G+ E A + + IL P +EA G+V + +
Sbjct: 109 AKLNPEQTRYGVLLAQAKQQIGDKEGAAQAYRSILETKPGNLEALQGMVALLLNQKRPEA 168
Query: 233 KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF 292
+ ++ + K+ + K E D ++++ + + ++ +AL +Y++ V P DF
Sbjct: 169 AIGLLQDTLAKSGQANKIEPGSVDTVAVQVMLGNVYASQKRYPQALSLYDQAVNIAPDDF 228
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
RP L + ++ K DEA+ F+K L P +
Sbjct: 229 RPVLAKAMVIKEQGKADEAKPLFDKAAALAPAQY 262
>gi|332705763|ref|ZP_08425839.1| hypothetical protein LYNGBM3L_10980 [Moorea producens 3L]
gi|332355555|gb|EGJ35019.1| hypothetical protein LYNGBM3L_10980 [Moorea producens 3L]
Length = 303
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 20/228 (8%)
Query: 110 ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAV 169
A+V +T +T + SA++ E + K E L P ++ AL+ L+E+R++ + + +
Sbjct: 59 ASVGATPTATPNM-SAQQQAELEAQAKGYELVLQREPENLTALRGLLEIRLQLRDIKGTI 117
Query: 170 DVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDG 229
+ +++L +L ++ ++ +L AQV+ G+ E A + + +IL P + A GLV
Sbjct: 118 EPLEKLAKLNTDQTDYGVLLAQVKQQIGDREGAAQAYRDILNAKPGDMNALQGLV----- 172
Query: 230 SDKKLNEVEKRIEKAMERCKKEKKKS-----------DLRDFKLLIAQIKVMESKHSEAL 278
L E R E A+ + K S D+ +LL+ Q+ + ++ EA
Sbjct: 173 ---SLLTQENRPEAAIGLLQDTLKSSQQVNEIKPGSIDVISVQLLLGQVYANQKRYDEAT 229
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+Y++ +K D+RP L + +I+ ++A+ F++ L P +
Sbjct: 230 AIYDQAIKGNQDDWRPVLAKAMIFQEQGNTEKAKPLFDQATSLAPAKY 277
>gi|443311296|ref|ZP_21040926.1| tetratricopeptide repeat protein [Synechocystis sp. PCC 7509]
gi|442778619|gb|ELR88882.1| tetratricopeptide repeat protein [Synechocystis sp. PCC 7509]
Length = 321
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 111/249 (44%), Gaps = 18/249 (7%)
Query: 75 LIKITSVTVAAAALLFMRLPFHSI-----KPAIAAPVAAAATVESTNESTKDTTSAREDV 129
LI I V A A + LP + +P A P+ + T + +S
Sbjct: 9 LINIILVVAAIALVGASMLPLLTSTIEQSQPPTATPLPSGQTALTDQKS----------- 57
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
++ + E L P ++ ALQ L + RIK + A+ I++L L P + ++ LL
Sbjct: 58 QLADQARGFELVLQREPENLTALQGLADARIKLGDIKGAIPSIEKLAALNPTQTQYALLL 117
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
AQ + G+ E + IL+ P A GLV+ ++ +E ++ + +
Sbjct: 118 AQAKVRTGDIEGGQNAYRSILKTKPGDNLALQGLVLTL-LQQQRADEAIALLQDTLNQAN 176
Query: 250 KEKK-KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
K K + D +LL+ ++ + ++ EA+ Y+ + +D RP+L +G + + ++
Sbjct: 177 KSKDARVDTTSVQLLLGEVYANQKRYDEAIATYDRAIAANQQDVRPFLAKGSVLAVQKRY 236
Query: 309 DEAEKQFEK 317
DEA +++
Sbjct: 237 DEAISLYDR 245
>gi|376003401|ref|ZP_09781212.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira sp. PCC 8005]
gi|375328204|emb|CCE16965.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira sp. PCC 8005]
Length = 300
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 8/218 (3%)
Query: 114 STNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIK--SQKLVEAVDV 171
+ N++ S + +++ + + L P++ AL+ ++ + + SQ + DV
Sbjct: 41 AGNQTAVSNISGAQLQDLQDQARGYQLVLQREPDNETALRGFLQAKFELISQGQGQVADV 100
Query: 172 ID---RLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV---M 225
++ RL +L P E+ +L AQ Q Y G E A + + +IL + P V+A GLV +
Sbjct: 101 VEPLQRLAQLHPETPEYGILLAQAQEYTGNPEGAAQSYRKILEQRPGEVQALQGLVSLLI 160
Query: 226 AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELV 285
+ + + + +E ++ A + + + D +L++ Q+ + ++ EA+ VY+E +
Sbjct: 161 SQNRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVYAEQQRYQEAIAVYDEAI 220
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
K DFRP L + II ++AE F + L P
Sbjct: 221 KNSESDFRPVLAKAIILRQQGNPEDAELLFAEAIDLAP 258
>gi|440682263|ref|YP_007157058.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428679382|gb|AFZ58148.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 333
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 99/195 (50%), Gaps = 14/195 (7%)
Query: 146 PNDIEALQTLMEVRIK--SQK---------LVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
P + AL+ L+E R++ SQK + +D +++L +L P + E+ +L AQ +
Sbjct: 104 PENQTALKGLVEARLQLLSQKGKGEVKPADIQAVIDPLEKLAKLNPQQSEYGVLLAQAKQ 163
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKE 251
G+ E A + + IL P ++A G+V ++ + + +++ + A + +
Sbjct: 164 QIGDKEGAAQSYRSILATKPGDLKALQGMVNLQISEKRPEAAIGLLQETLSNAAQANTIQ 223
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ D+ ++L+ + + S+A+ VY++ +K++P+DFRP L + ++ K DEA
Sbjct: 224 PESVDVVAVQVLLGSVYAFQKNESQAISVYDQAIKKDPKDFRPVLAKAMLLKDQGKVDEA 283
Query: 312 EKQFEKFRRLVPRNH 326
+ FE L P +
Sbjct: 284 KPLFENATALAPAEY 298
>gi|209527318|ref|ZP_03275827.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|423066882|ref|ZP_17055672.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
gi|209492244|gb|EDZ92590.1| Tetratricopeptide TPR_2 repeat protein [Arthrospira maxima CS-328]
gi|406711647|gb|EKD06847.1| tetratricopeptide TPR_2 repeat protein [Arthrospira platensis C1]
Length = 300
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 105/218 (48%), Gaps = 8/218 (3%)
Query: 114 STNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIK--SQKLVEAVDV 171
+ N++ S + +++ + + L P++ AL+ ++ + + SQ + DV
Sbjct: 41 AGNQTAVSNISGAQLQDLQDQARGYQLVLQREPDNETALRGFLQAKFELISQDQGQVADV 100
Query: 172 ID---RLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV---M 225
++ RL +L P E+ +L AQ Q Y G E A + + IL + P V+A GLV +
Sbjct: 101 VEPLQRLAQLHPETPEYGILLAQAQEYTGNPEGAAQSYRRILEQRPGEVQALQGLVSLLI 160
Query: 226 AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELV 285
+ + + + +E ++ A + + + D +L++ Q+ + ++ EA+ VY+E +
Sbjct: 161 SQNRPEAAIGLLEDTLKSAPQINQAQAGSIDEISIQLILGQVYAEQQRYQEAIAVYDEAI 220
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
K DFRP L + II ++AE F + L P
Sbjct: 221 KNSESDFRPVLAKAIILRQQGNPEDAELLFAEAIDLAP 258
>gi|428226792|ref|YP_007110889.1| hypothetical protein GEI7407_3370 [Geitlerinema sp. PCC 7407]
gi|427986693|gb|AFY67837.1| hypothetical protein GEI7407_3370 [Geitlerinema sp. PCC 7407]
Length = 291
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Query: 124 SAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF 183
S ++ E + E L P + AL+ L++ RI + V+ ++ L EL P +
Sbjct: 52 SGQQRADLENTARGYELVLQREPENQTALRGLVDARIALGDIKGTVEPLETLAELNPGQP 111
Query: 184 EWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKR 240
+ +L AQ + Y G+ E A + + +L ++P + A G L+ + + +N +
Sbjct: 112 SYTILLAQTKQYLGDREGAAQAYRNLLEENPGDMNALKGLSDLLTQQERPEAAVNLLTDV 171
Query: 241 IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGI 300
I+ A + + + ++ +LL+ ++ +S+ EA+ + +K P+DFRP L + I
Sbjct: 172 IDSAPQVNQVKPGSVNVPAVQLLLGEVYAQQSRFEEAITTLDASIKGSPQDFRPVLAKAI 231
Query: 301 IYTLLRKKDEAEKQFEKFRRLVPRNH 326
+ K DEA+ F + L P +
Sbjct: 232 VLQRQGKADEAKPLFSQAESLAPAQY 257
>gi|427416040|ref|ZP_18906223.1| hypothetical protein Lepto7375DRAFT_1668 [Leptolyngbya sp. PCC
7375]
gi|425758753|gb|EKU99605.1| hypothetical protein Lepto7375DRAFT_1668 [Leptolyngbya sp. PCC
7375]
Length = 319
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 8/186 (4%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++ AL+ L+E RI L A + + RL EL P E + +L AQ + + E A +
Sbjct: 71 PDNQAALEGLVEARITLGDLAGAAEPLARLAELNPQEPRYSVLLAQTKQQLNDLEGAAQT 130
Query: 206 FEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
+ +L P +EA GLV + + + ++ ++ A + + + D+ KL
Sbjct: 131 YRSVLTSTPGNMEALQGLVALLVQQERPQAAIGLLQDTLKTAEQSNQIQPGTIDVIAVKL 190
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPR-----DFRPYLCQGIIYTLLRKKDEAEKQFEK 317
L+ QI +S+ +A+ Y+ +++ DFRP L +G+I + +DEA+ FE
Sbjct: 191 LLGQIYADQSRFEDAIATYDTAIQDAQTVSGTPDFRPILAKGLILREMGNEDEAQPLFES 250
Query: 318 FRRLVP 323
L P
Sbjct: 251 ALSLAP 256
>gi|119493564|ref|ZP_01624229.1| hypothetical protein L8106_25972 [Lyngbya sp. PCC 8106]
gi|119452618|gb|EAW33800.1| hypothetical protein L8106_25972 [Lyngbya sp. PCC 8106]
Length = 311
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 92/183 (50%), Gaps = 6/183 (3%)
Query: 152 LQTLMEVRIKSQKLV-EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEIL 210
LQ +E+ Q V + V+ + +L ++ P E+ +L AQ Q Y G+ E A + + +IL
Sbjct: 82 LQAKLELISMGQGDVKDVVEPLQKLSQMNPETNEYSILLAQSQQYTGDLEGAAQTYRQIL 141
Query: 211 RKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
+ P +++A GLV + + + ++ I+ A + + + D +L++ Q+
Sbjct: 142 TQQPGQIQALQGLVNLLLTQKRPEAAIGLLQDTIKAAPQANQAQPGTIDETSVQLILGQV 201
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP 327
+ ++ EA+ +Y+E ++ DFRP L + I+ +EAE F K L P P
Sbjct: 202 YAEQKRYDEAIAIYDEAIRNNQEDFRPVLAKAIVLKDQGNLEEAEPLFGKASDLAP--AP 259
Query: 328 YRE 330
Y++
Sbjct: 260 YKD 262
>gi|443317022|ref|ZP_21046445.1| hypothetical protein Lep6406DRAFT_00022940 [Leptolyngbya sp. PCC
6406]
gi|442783362|gb|ELR93279.1| hypothetical protein Lep6406DRAFT_00022940 [Leptolyngbya sp. PCC
6406]
Length = 299
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 105 PVAAAATVESTNESTKDTTSAREDVSYE--EKEKEIEQHLAANPNDIEALQTLMEVRIKS 162
P+ T+ ST +T D+ E ++ + E L P++ A+ L+E RI+
Sbjct: 33 PILGGRNSRPTSASTPGSTPEAVDMQTELADRARGYELVLEREPDNQTAILGLVETRIQL 92
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
L V+ + +L +L P+ E+++L Q + G+ E A + + +L P ++A G
Sbjct: 93 GDLAGVVEPLSKLADLNPDVTEYRVLLGQTKQALGDLEGAAQAYRTVLTSSPGDMKALQG 152
Query: 223 LVMAYDGSDKKLNEVE--KRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEAL 278
LV ++ V + KA S + D +LL+A++ V E + +AL
Sbjct: 153 LVKLLLDQNRPQAAVGLLQDTLKAANPTGTATGGSTIDDVSVRLLLAEVYVQEERFDDAL 212
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+Y+E + DFRP L + ++ + EA F++ L P
Sbjct: 213 SLYDETIAIASDDFRPLLAKALVLRNMGNTGEAAPLFQQAEELAP 257
>gi|113476025|ref|YP_722086.1| hypothetical protein Tery_2395 [Trichodesmium erythraeum IMS101]
gi|110167073|gb|ABG51613.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 300
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 114/222 (51%), Gaps = 18/222 (8%)
Query: 116 NESTKDTTSAREDVSYEEKEKEI-------EQHLAANPNDIEALQTLMEVR---IKSQK- 164
N+ +T + S +KE ++ E L P+++ ALQ L++V+ I+S K
Sbjct: 45 NQQNSQSTPSPNQTSVADKEADLLAQARGYELVLQREPDNLTALQGLLQVKLELIQSGKS 104
Query: 165 -LVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
+ + + +++L EL P+ ++ +L AQ ++Y G+ E A + + +L P ++A GL
Sbjct: 105 NIEDILSPLEKLSELNPSSTDYNVLLAQAKAYTGDREGAAQIYRSLLAIKPGDIKALQGL 164
Query: 224 V---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRV 280
V + + + + ++ ++ A + + E D+ +L++ Q+ + ++ EA+ V
Sbjct: 165 VSLLLEQERPEAAIGLLQDTLKAAPVKNQVEAGSIDIVSVQLILGQVYAQQKRYEEAIAV 224
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
Y+E +K +DFRP L + II L+++ E E F + +
Sbjct: 225 YDEAIKLSSKDFRPILAKAII---LQEQGNTEASQELFNKAI 263
>gi|428780061|ref|YP_007171847.1| hypothetical protein Dacsa_1834 [Dactylococcopsis salina PCC 8305]
gi|428694340|gb|AFZ50490.1| hypothetical protein Dacsa_1834 [Dactylococcopsis salina PCC 8305]
Length = 288
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 91/181 (50%), Gaps = 7/181 (3%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P + ALQ L+EVRI+ + A+ +++L +L P + +++L AQ + G+ E A
Sbjct: 84 PENESALQGLIEVRIQQGDIEGALIPLEKLADLNPEQEAYRILLAQAKQQTGDLEGASDA 143
Query: 206 FEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
+ IL + P +A GLV + + + ++E+ +E A + ++ + D KL
Sbjct: 144 YRFILDEKPGDTQALQGLVDLLLQQNRPEAAISELRNTLETA----ENKETEIDTTGVKL 199
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
L+AQ+ K A+ +Y E+ P DFRP L Q ++ ++ A+ +EK L
Sbjct: 200 LLAQVYGRTEKFDGAIELYREVANNNPADFRPVLGQALVQQRKGNEEAAKPLYEKAFNLA 259
Query: 323 P 323
P
Sbjct: 260 P 260
>gi|434405516|ref|YP_007148401.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428259771|gb|AFZ25721.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 350
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 125/263 (47%), Gaps = 17/263 (6%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKE 137
I V +A A + F+ + SI P I A + ++T S ++ + +++ +
Sbjct: 51 IVQVVLALAVIAFVGV---SIMPIIGALNDQQSPGQNTASSKGSLPNSDQKSKLDDQVRG 107
Query: 138 IEQHLAANPNDIEALQTLMEVRIK--SQK---------LVEAVDVIDRLIELEPNEFEWQ 186
E L P + AL+ ++E R++ SQK + ++ +++L +L P++ E+
Sbjct: 108 YELVLQKEPENQTALKGVLEARLQLLSQKGRGEIKPADIQAVIEPLEKLAKLNPDKSEYA 167
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEK 243
+L AQ + G+ E A + IL P ++A G+V + + +++ +
Sbjct: 168 VLLAQAKQQIGDKEGAAVAYRSILATRPGDLKALQGMVTLQINEKRPEAAIGLLQETLSN 227
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
A + + D+ ++L+ + + + +A+ VY++ +K++P+DFRP L +G++
Sbjct: 228 AAQANTIQPGSVDIVAVQVLLGSVHAFQKNYPQAISVYDQAIKKDPQDFRPILAKGMLLK 287
Query: 304 LLRKKDEAEKQFEKFRRLVPRNH 326
+ +EA+ F+ L P +
Sbjct: 288 EQGQVEEAKPLFDSASALAPAQY 310
>gi|414079800|ref|YP_007001224.1| hypothetical protein ANA_C20752 [Anabaena sp. 90]
gi|413973079|gb|AFW97167.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 302
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 127/265 (47%), Gaps = 21/265 (7%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKD--TTSAREDVSYEEKE 135
I V +A A + F+ + I A+ P ++ N+ T D +S+ + E++
Sbjct: 9 IVRVVLAFAVVAFLGVSIMPIITAVNKPQSS-----PQNQPTADPKISSSEQKSKLEDQV 63
Query: 136 KEIEQHLAANPNDIEALQTLMEVRI-----KSQKLVEAVDV------IDRLIELEPNEFE 184
+ E L + + AL+ L++ R+ KSQ V+ D+ +++L +L P + E
Sbjct: 64 RGYELVLQKDAENQTALKGLLQARLGLLSQKSQGEVKPADIQAVIEPLEKLAKLNPQQSE 123
Query: 185 WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRI 241
+ +L AQ + G+ E A + + IL K P ++A G+V ++ + + +++ +
Sbjct: 124 YGVLLAQAKQQIGDKEGAAQTYRSILTKKPGDLKALQGMVNLQLSEKRPEAAIGLLQESL 183
Query: 242 EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGII 301
A + + D+ ++L+ + + ++A+ Y++ +K++ +DFRP L + ++
Sbjct: 184 AAATQANTIQPGSVDVVAVQVLLGSVYAFQKNDNKAISAYDQAIKKDAQDFRPVLAKAML 243
Query: 302 YTLLRKKDEAEKQFEKFRRLVPRNH 326
+ K D+A+ F+ L P +
Sbjct: 244 FKEQGKLDKAKPLFDSATALAPAQY 268
>gi|224147359|ref|XP_002336460.1| predicted protein [Populus trichocarpa]
gi|222835071|gb|EEE73520.1| predicted protein [Populus trichocarpa]
Length = 114
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 197 GESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
G + A FEEIL +PL EA + L+M G + V +R+++A++ +E K
Sbjct: 2 GRVQDARNVFEEILVYNPLSFEALFENPLLMDRCGEGEA---VIRRLQEALDIAGEENKV 58
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ R+ +L++AQ++ ++ +AL+ Y+EL KE+P+DF PY C+GIIY+LL + +
Sbjct: 59 KEARNVRLIMAQMQFLQKNVEKALKSYQELSKEDPKDFGPYFCRGIIYSLLDRNE 113
>gi|428777892|ref|YP_007169679.1| hypothetical protein PCC7418_3350 [Halothece sp. PCC 7418]
gi|428692171|gb|AFZ45465.1| tetratricopeptide TPR_2 [Halothece sp. PCC 7418]
Length = 286
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 15/204 (7%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ 186
E + ++ + E L P++ ALQ L+EVRI+ + A+ +++L +L P++ ++
Sbjct: 53 EQANLADQARGYEAVLEKEPDNESALQGLIEVRIQQGDIEGALPPLEKLADLNPDQQAYR 112
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
+L AQ + G+ E A + IL P A GLV L + R E A+
Sbjct: 113 ILLAQAKQQVGDLEGAADAYRTILDNQPGDPRALQGLV--------DLLLQQNRPEAAIG 164
Query: 247 RCKK-----EKKKSDLR--DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
K E D+ KLL+AQ+ + A+ +YEE+ P DFRP L Q
Sbjct: 165 ELKDTLALAEGGNEDINTTSIKLLLAQVYGRTEQFDGAIALYEEVADSNPGDFRPVLGQA 224
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVP 323
++ + A+ +EK L P
Sbjct: 225 LVQQEKGDDEAAKPLYEKAFDLAP 248
>gi|428301076|ref|YP_007139382.1| hypothetical protein Cal6303_4509 [Calothrix sp. PCC 6303]
gi|428237620|gb|AFZ03410.1| hypothetical protein Cal6303_4509 [Calothrix sp. PCC 6303]
Length = 296
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 110/237 (46%), Gaps = 15/237 (6%)
Query: 105 PVAAAATVESTNESTKDTTSAREDVS-------YEEKEKEIEQHLAANPNDIEALQTLME 157
P+ + A +S + + T S + + S +++ + E L P + AL+ L++
Sbjct: 34 PLFSGAMGDSQSSANNTTDSGKNNSSPEAIKTKLQDEARGYESVLQKEPENQTALKGLLQ 93
Query: 158 VRI-----KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRK 212
R+ K K+ + ++ +++L +L+P E ++ +L +Q + G+ E A + +L
Sbjct: 94 ARLQLLSLKQGKIQDVIEPLEKLAKLDPEETKYAVLLSQAKQQIGDKEGATQALRNVLET 153
Query: 213 DPLRVEAYH---GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKV 269
P +EA GL+M + L ++ + KA + K E D ++L+ I
Sbjct: 154 KPGNMEALQAMVGLLMTQKKPEAALGVLQDTLTKAPQINKLEPGTVDTVAIQVLMGNIHA 213
Query: 270 MESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+ ++ +A +Y++ +K P+D RP + ++ K +EA+ F L P +
Sbjct: 214 EQKRYGKAFDIYDQAIKSAPKDHRPIWAKALVLKDQGKMEEAKPLFSNAAALAPAQY 270
>gi|186683043|ref|YP_001866239.1| hypothetical protein Npun_F2761 [Nostoc punctiforme PCC 73102]
gi|186465495|gb|ACC81296.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 327
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 127/263 (48%), Gaps = 17/263 (6%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKE 137
I V +A A L F+ + S+ P I A ++ ++T + SA + E++ +
Sbjct: 39 IVQVVLALAVLAFVGV---SVIPIIGAFNNTPSSNQNTASTRGTLPSADQKSKLEDEVRG 95
Query: 138 IEQHLAANPNDIEALQTLMEVRIK--SQKL---VEAVDV------IDRLIELEPNEFEWQ 186
E L P + AL+ L++ R++ SQK V+ D+ +++L +L P + E+
Sbjct: 96 YELVLQREPENQTALKGLLQARLQLLSQKEKSEVKPADIQVVIEPLEKLAKLNPEQSEYS 155
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEK 243
+L AQ + G+ E A + + IL P ++A G+V ++ + + +++ + K
Sbjct: 156 VLLAQAKQQIGDREGAAQAYRAILSTKPGDLKALQGMVALLISQQRPEAAIGLLQETLSK 215
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
A + + D ++L+ + + ++++A VY++ +K +P+DFRP + + ++
Sbjct: 216 AAQVNTIQPGSVDTVAVQVLLGSVHASQKRYAQASSVYDQAIKRDPKDFRPVVAKAMLLK 275
Query: 304 LLRKKDEAEKQFEKFRRLVPRNH 326
K +A+ F+ L P +
Sbjct: 276 QQGKDADAKPLFDSAAALAPAQY 298
>gi|434389719|ref|YP_007100330.1| hypothetical protein Cha6605_5957 [Chamaesiphon minutus PCC 6605]
gi|428020709|gb|AFY96803.1| hypothetical protein Cha6605_5957 [Chamaesiphon minutus PCC 6605]
Length = 283
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 124 SAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF 183
SA + + + Q L P + AL+ L++ R++ + ++ ++++ L P
Sbjct: 47 SAAQTSQLQSQINGYTQVLQKEPENQVALKGLLDARLQLGDIKGSLAPLEKIAALNPQTP 106
Query: 184 EWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV-MAYDGSDKKLNEVEKRIE 242
+ +L AQ + Y G+ E A + +L P + A GLV + D KR E
Sbjct: 107 NYTVLVAQTKQYLGDREGATASYRTVLALQPQNINALQGLVSLLIDA---------KRPE 157
Query: 243 KAMERCKKEKKK----SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQ 298
AM + K +D KLL+AQI + + ++++AL +Y+ ++ +DFRP L +
Sbjct: 158 AAMGVVQTALKTVATDADATPIKLLMAQIYLTQQRNADALGIYDAAIEANKQDFRPVLAK 217
Query: 299 GIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+++ + +A+ L P +
Sbjct: 218 ALVFKQMGNLTQAQSLMSTAVDLAPAEY 245
>gi|427707388|ref|YP_007049765.1| hypothetical protein Nos7107_1990 [Nostoc sp. PCC 7107]
gi|427359893|gb|AFY42615.1| hypothetical protein Nos7107_1990 [Nostoc sp. PCC 7107]
Length = 291
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 120/258 (46%), Gaps = 14/258 (5%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKE-K 136
I V +A A L+F+ + I A +P T S N + K ++ + S + E +
Sbjct: 9 IVRVILALAVLMFVGVSIIPIISAFNSP-----TPTSQNTAPKGNLASSDQKSKLQDEVR 63
Query: 137 EIEQHLAANPNDIEALQTLMEVRIK----SQKLVEAVDV-IDRLIELEPNEFEWQLLKAQ 191
E L P + AL+ L++ R++ +Q V+ V +++L +L P E+ +L AQ
Sbjct: 64 GYELVLQREPENQTALKGLLQARLQLLSLNQGDVQGVIAPLEKLAKLNPERSEYGVLLAQ 123
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERC 248
+ G+ E A + + IL P ++A G+V + + + +++ + A +
Sbjct: 124 AKQQIGDKEGAAQAYRTILDTKPGDLKALQGMVALLLDQQRPEAAIGLLQETLNNATQAN 183
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + ++L+ + + ++ +A VY++ +K++P+DFRP L + ++ K
Sbjct: 184 NIQPGSVNAIAVQVLLGNVYAAQKRYPQAANVYDQAIKKDPKDFRPVLAKAMLLKEQGKT 243
Query: 309 DEAEKQFEKFRRLVPRNH 326
EA+ F L P +
Sbjct: 244 TEAKPLFNSAVNLAPAQY 261
>gi|427729533|ref|YP_007075770.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
gi|427365452|gb|AFY48173.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
Length = 290
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 122/257 (47%), Gaps = 11/257 (4%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKE 137
I + +A A L F+ + S+ P I A ++ ++ + ++ ++ + ++ +
Sbjct: 9 IVQIILALAVLTFVGV---SVVPIIGAINNTTSSNQNPASPSTNSAASEQKTKLQDTVRG 65
Query: 138 IEQHLAANPNDIEALQTLMEVRI-----KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E L P + AL+ L++ R+ K + ++ +++L +L P++ E+ +L AQ
Sbjct: 66 YELVLQREPENQTALKGLLQARLQLLSLKQGNIQGVIEPLEKLAKLNPDQSEYGVLLAQA 125
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCK 249
+ G+ E A + + IL P ++A G+V + + + ++ + A +
Sbjct: 126 KQQIGDKEGAAQAYRTILDTKPGDLKALQGMVALLLDQQRPEAAIGLLQDTLTNAAQANT 185
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ D+ ++L+ + + ++ +A+ +++ +K++P+DFRP L + ++ K
Sbjct: 186 IQPGSVDVVAVQVLLGNVHANQKRYPQAVSAFDQAIKKDPKDFRPVLAKAMLLKEQGKAA 245
Query: 310 EAEKQFEKFRRLVPRNH 326
EA+ F+ L P +
Sbjct: 246 EAKPLFDSAVALAPAQY 262
>gi|416389320|ref|ZP_11685319.1| hypothetical protein CWATWH0003_2141 [Crocosphaera watsonii WH
0003]
gi|357264229|gb|EHJ13142.1| hypothetical protein CWATWH0003_2141 [Crocosphaera watsonii WH
0003]
Length = 256
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 118/236 (50%), Gaps = 19/236 (8%)
Query: 89 LFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYE---EKEKEIEQHLAAN 145
+ + L SI P I++ V A+ +++ + + T E + Y+ E+E
Sbjct: 1 MLLSLISFSILPLISSIVQASQGEQASLVTPETTRLENEALGYQLVLERE---------- 50
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++ AL L+E R+ L A+ + RL +L P + ++ +L AQ Q A+
Sbjct: 51 PDNENALLGLLENRLTQGDLEAAIAPLQRLAQLNPKQPDYSILLAQSQQQLKNYPEALNT 110
Query: 206 FEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKE---KKKSDLRD 259
+++I+ +P + A G+V Y + S +N V+K + +A+ + E K +L
Sbjct: 111 YQQIIVANPGDMRALKGMVDVYLEQNRSQDAINLVQKTLNQALAQQSNESADKSVFNLTS 170
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+LL+ +I + ++ +AL +Y++ +K + +DFRP L + ++ +++EA+ F
Sbjct: 171 LQLLLGEIYGEQEQYDKALVIYDQAIKGDEKDFRPLLAKAMLLREQGQEEEAQTLF 226
>gi|422301519|ref|ZP_16388886.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9806]
gi|389789434|emb|CCI14509.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9806]
Length = 276
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 23/260 (8%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
+++ +LF L F SI P + + ++S + S + SA E + +
Sbjct: 11 LSIGLVLMLFALLSF-SIMPLLTS------ILQSQHSSGQSNLSAVEQEKLASQALGYQM 63
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYA 196
L P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ Y
Sbjct: 64 VLEREPDNQAALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYP 123
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
G A + +L P + A GL ++ + S + ++ V++ I++A++
Sbjct: 124 G----ATASYRALLASHPQELRALTGLTNLFLSQNRSIEAISLVKETIDRALKAAADPNN 179
Query: 254 KSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ L D +LL+ +I + + EA + Y + + + DFRP L I+ K E
Sbjct: 180 PASLIDIVSVQLLLGKIYFEQQNYPEAFKAYTQAQQMDVNDFRPILATAIVLKEQGKNQE 239
Query: 311 AEKQFEKFRRLVPRNHPYRE 330
A+ F+K L P YR+
Sbjct: 240 AQPLFQKALSLAP--FAYRQ 257
>gi|298491604|ref|YP_003721781.1| hypothetical protein Aazo_2811 ['Nostoc azollae' 0708]
gi|298233522|gb|ADI64658.1| Tetratricopeptide repeat protein ['Nostoc azollae' 0708]
Length = 285
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 115/235 (48%), Gaps = 16/235 (6%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIK--SQ 163
+ A +S N + ++ + ++ E + E+ L P + AL+ L++ R++ SQ
Sbjct: 30 IGALNNPQSVNPTNSPASNQKSQLADEVRGYEL--VLQREPENQTALKGLVQARLQLLSQ 87
Query: 164 KL---VEAVDV------IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
K V+ D+ +++L +L P + E+ +L AQ + ++E A + + IL P
Sbjct: 88 KARGEVKPADIQAVIEPLEKLAKLNPQQSEYGVLLAQAKQQIADNEGAAQTYRSILATKP 147
Query: 215 LRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVME 271
++A G+V ++ + + ++ + A + + D+ ++L+ + +
Sbjct: 148 GDLKALQGMVNLQISQQRPEAAIGLLQDTLSAATQANTIQPGSVDVVAVQVLLGSVYAFQ 207
Query: 272 SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++A+ +YE+ +K++P+DFRP L + ++ K +EA+ FE R L P +
Sbjct: 208 KNDTQAISIYEQAIKKDPQDFRPVLAKAMLLKEQGKVEEAKLLFETARALAPAQY 262
>gi|425457079|ref|ZP_18836785.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9807]
gi|389801665|emb|CCI19198.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9807]
Length = 266
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 23/260 (8%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
+++ +LF L F SI P + + ++S + S + SA E + +
Sbjct: 11 LSIGLILMLFALLSF-SIMPLLTS------ILQSQHSSVQSHLSAVEQEKLASQALGYQM 63
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYA 196
L P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ YA
Sbjct: 64 VLEREPDNQAALRGLLDTRLQQGDLRQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYA 123
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE---VEKRIEKAMERCKKEKK 253
G A + +L P + A GL + ++++ V++ +++A++
Sbjct: 124 G----ATGSYRALLASHPQELRALTGLTNLFLSQNRQIEAISLVKETLDRALKAAADPNN 179
Query: 254 KSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ L D +LL+ +I + + EA + Y + + + DFRP L I+ K E
Sbjct: 180 PASLIDIVSVQLLLGKIYFEQQNYPEAFKAYTQAQQMDVNDFRPILATAIVLKEQGKNQE 239
Query: 311 AEKQFEKFRRLVPRNHPYRE 330
A+ F+K L P YR+
Sbjct: 240 AQPLFQKALSLAP--FAYRQ 257
>gi|425445428|ref|ZP_18825458.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
gi|389734580|emb|CCI01781.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
Length = 276
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 23/260 (8%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
+++ +LF L F SI P + + ++S + S + SA E + +
Sbjct: 11 LSIGLILMLFALLSF-SIMPLLTS------ILQSQHSSVQSHLSAVEQEKLASQALGYQM 63
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYA 196
L P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ YA
Sbjct: 64 VLEREPDNQAALRGLLDTRLQQGDLRQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYA 123
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE---VEKRIEKAMERCKKEKK 253
G A + +L P + A GL + ++++ V++ +++A++
Sbjct: 124 G----ATGSYRALLASHPQDLRALTGLTNLFLSQNRQIEAISLVKETLDRALKAAADPNN 179
Query: 254 KSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ L D +LL+ +I + + EA + Y + + + DFRP L I+ K E
Sbjct: 180 PASLIDIVSVQLLLGKIYFEQQNYPEAFKAYTQAQQMDVNDFRPILATAIVLKEQGKNQE 239
Query: 311 AEKQFEKFRRLVPRNHPYRE 330
A+ F+K L P YR+
Sbjct: 240 AQPLFQKALSLAP--FAYRQ 257
>gi|158338828|ref|YP_001520005.1| hypothetical protein AM1_5741 [Acaryochloris marina MBIC11017]
gi|158309069|gb|ABW30686.1| TPR domain protein, putative [Acaryochloris marina MBIC11017]
Length = 307
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 140 QHLAANPNDIEALQTLMEVR-------IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
Q L P++ +AL+ L E R +K++K + +D +++L+EL P + ++Q+L AQ
Sbjct: 73 QILEKEPDNPDALRGLAEARSQMIKIGLKTEK--DLLDPLEKLVELNPEQTQYQVLLAQT 130
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLV--MAYDGSDKKLNEVEKRIEKAMERCKK 250
G+ E+A + + IL +P ++A G V + E+ + K + +
Sbjct: 131 LQKTGKRESAAQTYRSILATEPGNMDALQGFVNLLVEQQRPSAATELLQTTLKNAPQANQ 190
Query: 251 EKKKS-DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
K S + +LL+ Q+ + + +A+ VY++L+ ++P DFRP + I+ K
Sbjct: 191 VKPNSINESAVQLLLGQVYATQRQFDQAVGVYDKLIAKDPNDFRPVFAKAILLREQGKTK 250
Query: 310 EAEKQFEKFRRLVPRNH 326
EA+ F +L P +
Sbjct: 251 EADILFNSAEKLAPGQY 267
>gi|119509498|ref|ZP_01628646.1| TPR repeat protein [Nodularia spumigena CCY9414]
gi|119465904|gb|EAW46793.1| TPR repeat protein [Nodularia spumigena CCY9414]
Length = 292
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 121/258 (46%), Gaps = 14/258 (5%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVS-YEEKEK 136
+ + +A A F+ + I AI P + + N ++ +T + +S +++ +
Sbjct: 9 LVRIILALAVTAFLGVSVIPIISAINNP-----SPSNQNAASTSSTVPSDQISKLQDEVR 63
Query: 137 EIEQHLAANPNDIEALQTLMEVRI-----KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+ L P + AL L++ R+ K + ++ +++L +L P + E+ +L AQ
Sbjct: 64 GYQMVLQREPENQTALNGLLQARLQLLSLKQGDIQGVIEPLEKLAQLNPEQSEYGVLLAQ 123
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV-MAYDGS--DKKLNEVEKRIEKAMERC 248
+ G+ E + + + IL P ++A G+V + D + + +E + A
Sbjct: 124 AKQQMGDLEGSAQAYRSILDTKPGDLKALQGMVALLVDQQRPEAAIGLLEDTLSNAEPAN 183
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
K + D ++L+ + + ++ EA +Y++ +K++P+DFRP L + +++ K
Sbjct: 184 KIQPGSVDTVAIQVLLGTVHASQKRYPEATSIYDQAIKKDPQDFRPVLAKAMLFREQGKV 243
Query: 309 DEAEKQFEKFRRLVPRNH 326
+EA+ F+ L P +
Sbjct: 244 EEAKPLFDSAVALAPAQY 261
>gi|359460711|ref|ZP_09249274.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 307
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 140 QHLAANPNDIEALQTLMEVR-------IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
Q L P++ +AL+ L E R +K++K + +D +++L+EL P + ++Q+L AQ
Sbjct: 73 QILEKEPDNPDALRGLAEARSQMIKIGLKTEK--DLLDPLEKLVELNPEQTQYQVLLAQT 130
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLV--MAYDGSDKKLNEVEKRIEKAMERCKK 250
G+ E+A + + IL +P ++A G V + E+ + K + +
Sbjct: 131 LQKTGKRESAAQTYRSILATEPGNMDALQGFVNLLVEQQRPSAATELLQTTLKNAPQANQ 190
Query: 251 EKKKS-DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
K S + +LL+ Q+ + + +A+ VY++L+ ++P DFRP + I+ K
Sbjct: 191 VKPNSINESAVQLLLGQVYATQRQFDQAVGVYDKLIAKDPNDFRPVFAKAILLREQGKTK 250
Query: 310 EAEKQFEKFRRLVPRNH 326
EA+ F +L P +
Sbjct: 251 EADILFNSAEKLAPGQY 267
>gi|282902039|ref|ZP_06309937.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
gi|281193126|gb|EFA68125.1| TPR repeat protein [Cylindrospermopsis raciborskii CS-505]
Length = 267
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 30/203 (14%)
Query: 146 PNDIEALQTLMEVRIK--SQK---------LVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
P + L+ L++VR++ SQK + ++ + +L L P+ E+++L AQ
Sbjct: 62 PENQTVLKQLLQVRLQILSQKPNSEVQPADIQGVIETLQKLSRLNPDNLEYKVLLAQATQ 121
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK---- 250
G ++ A + + IL+ P +++ GLV KL +KR E A++ K+
Sbjct: 122 QIGNTQEASQIYRSILQTQPGNIQSLQGLV--------KLELDQKRPEVAIQFLKETISN 173
Query: 251 -EKKKS------DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
EK S D+ +LL+ ++ + +A+ +YEE++K+ P+DFRP L + I+
Sbjct: 174 AEKSNSVQPGSFDIIAIQLLLGRVYSSQKNPDQAISLYEEVMKQYPQDFRPVLAKAILLK 233
Query: 304 LLRKKDEAEKQFEKFRRLVPRNH 326
K +EA+ F+ L P +
Sbjct: 234 EQGKINEAKPLFDSALTLAPAQY 256
>gi|282897745|ref|ZP_06305744.1| TPR repeat protein [Raphidiopsis brookii D9]
gi|281197424|gb|EFA72321.1| TPR repeat protein [Raphidiopsis brookii D9]
Length = 267
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 146 PNDIEALQTLMEVRIK--SQKL---VEAVDV------IDRLIELEPNEFEWQLLKAQVQS 194
P + L+ L++ R++ SQK V+ D+ + +L L P+ E+++L AQ
Sbjct: 62 PENQAVLKQLLQARLQILSQKPNNEVQPTDIQGVIEPLQKLSRLNPDNLEYKVLLAQATQ 121
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK---- 250
G + AI+ + ILR P +++ G+V KL +KR E A++ K+
Sbjct: 122 QIGNRQEAIQMYRSILRTQPGNIQSLQGIV--------KLKLDQKRPEAAIQFLKETISN 173
Query: 251 -EKKKS------DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
EK S D+ +LL+ + + +A+ +Y+E++K+ P+DFRP L + I+
Sbjct: 174 AEKSNSVQPGSFDIIAIQLLLGSVYSSQKNTDQAISLYQEVMKQYPQDFRPVLAKAILLK 233
Query: 304 LLRKKDEAEKQFEKFRRLVPRNH 326
K +EA+ F+ L P +
Sbjct: 234 EQGKINEAKPLFDSALTLAPAQY 256
>gi|440756457|ref|ZP_20935658.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440173679|gb|ELP53137.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 272
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 23/260 (8%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
+++ +LF L F SI P + + ++S + S + SA + + +
Sbjct: 11 LSIGLILMLFALLSF-SIMPLLTS------ILQSQHSSGQSHLSAVKQEELASQALGYQM 63
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYA 196
L P++ AL+ L+++R++ L +A++ +++L +L P + ++ LL K Q++ YA
Sbjct: 64 VLEREPDNQAALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYA 123
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKEKK 253
G A + +L P + A GL + ++ ++ V+ I++A++
Sbjct: 124 G----ATASYRSLLASHPQNLRALTGLTNLFLSQNRHTEAISLVKDTIDRALKAAADPNN 179
Query: 254 KSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ L D +LL+ +I + + EAL Y++ + + DFRP L I+ K E
Sbjct: 180 PASLIDIVSVQLLLGKIYFEQQNYPEALNTYKQAQQMDVNDFRPILATAIVLKEQGKNQE 239
Query: 311 AEKQFEKFRRLVPRNHPYRE 330
A+ F++ P YRE
Sbjct: 240 AQPLFQEALSRAP--FAYRE 257
>gi|255647303|gb|ACU24118.1| unknown [Glycine max]
Length = 238
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 43/275 (15%)
Query: 16 LSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNPKPSLLRTLTPLSSPL 75
L+ NHH S S + SL +SS F F+ +SS AS +P P L+ PL +
Sbjct: 4 LTLNHHPQSLRASFHY-SLTLSTTSSIF-FNPHHSSSVVASLSDPDPKSLQFFNPLRK-V 60
Query: 76 IKITSVTVAAAALLFMRLPFHS-IKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEK 134
+VT A+AA LF+ + IK ++++ V+ ++ E+
Sbjct: 61 PSFVTVTAASAAFLFLGFCRNGFIKKSLSSVVSIQGGLDGKG--------------MLEE 106
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
E+ + HL + + + RI +E WQ+LKA+V +
Sbjct: 107 EEPVVLHLKLKKR-VPIVHDFKKTRI-------------------ADEEAWQVLKAEVFN 146
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK- 253
+ E A FEE+L K+ +A+H V+ + + + K I+ AM+RC+K+
Sbjct: 147 SSERFEFAKVRFEEMLEKER---KAFHDCVLEHLERIDECKTLLKEIKVAMDRCEKKNTN 203
Query: 254 -KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
K LR F ++A ++V+E+ AL+ Y+EL K+
Sbjct: 204 LKCSLRFFSKVVAHVRVLEANMLHALKYYKELDKD 238
>gi|308274171|emb|CBX30770.1| hypothetical protein N47_E42820 [uncultured Desulfobacterium sp.]
Length = 765
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E+ E ++ + NP DI+AL L I +K E + ++++++ P E +LK +
Sbjct: 292 EKAEAAFKETVDKNPQDIKALSRLASFYIDDKKYDEGMKETEKILKINPKSQEGLVLKGR 351
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ + A F+ L+ +P Y+ L MA+ G+ E ++ E K
Sbjct: 352 LYLVRNKFTEAQSLFQSFLKDNPKAALGYYLLAMAHYGN----KETQQAKTALAEAIKLN 407
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
K S+ R L+A I + E +SEA+ ++KE+P++ + YL G Y + + EA
Sbjct: 408 TKWSEPR---FLLANIYMREGAYSEAVNEAMGVLKEQPKNPKAYLIMGNSYLMQKNIPEA 464
Query: 312 EKQFEKFRRLVPRN 325
+K FE+ ++ P N
Sbjct: 465 QKSFEELLKIAPNN 478
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 264 IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+AQ + K A R + VK +P+D + Y+ G Y + ++ ++AEKQ+ K + P
Sbjct: 213 LAQFYLRTGKIDNAEREFLNAVKADPKDVKAYMALGNFYFITKRPEDAEKQYLKCLEISP 272
Query: 324 RNHPYR 329
+ P R
Sbjct: 273 KEVPVR 278
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
E+E + A+P D++A L +++ +A + +E+ P E +L A++
Sbjct: 227 EREFLNAVKADPKDVKAYMALGNFYFITKRPEDAEKQYLKCLEISPKEVPVRLRLAELYL 286
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
G+ E A F+E + K+P ++A L Y DKK +E K EK ++ K ++
Sbjct: 287 AWGKKEKAEAAFKETVDKNPQDIKALSRLASFYI-DDKKYDEGMKETEKILKINPKSQEG 345
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR 290
L+ ++ ++ +K +EA +++ +K+ P+
Sbjct: 346 LVLK------GRLYLVRNKFTEAQSLFQSFLKDNPK 375
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E +K E+ L PN+ A + + + +K EA++ ++ ++L+P+ E V
Sbjct: 463 EAQKSFEELLKIAPNNPFAYSQMGRLMLVEKKEKEALENFEKALKLQPDYTEPLQFIVSV 522
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
+ + A + +E ++ P Y+ Y+ +K L E +KA+E +
Sbjct: 523 MMNNKDYKKAFERVDEQIKISPKNPFLYNIRASLYE-FEKDLTNAENDFKKAIELNR--- 578
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
D ++ + + +A + YEE +K+ P + G+IY +K DEA+
Sbjct: 579 ---DSPALQMALGNFYLRHKTMDKAKKSYEETIKKAPDSLNAQMALGMIYENEKKYDEAK 635
Query: 313 KQFEKFRRLVPRNHP 327
+EK ++ P P
Sbjct: 636 SHYEKVLKINPDFAP 650
>gi|254425015|ref|ZP_05038733.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
gi|196192504|gb|EDX87468.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
Length = 300
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 135 EKEIEQHLAA---NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E EI+ + A P++ AL ++ + + L V+ ++RL++L P+E + +L AQ
Sbjct: 56 EGEIQGYTAVLSREPDNQTALSGIIYAKSRLGDLEGTVEPLERLVDLNPSEPRYAVLLAQ 115
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIEKAMERC 248
+ + E A + + +L + P V A G L+++ + ++ + ++ ++ A +
Sbjct: 116 TKQQLNDLEGAAQVYRSVLTQTPGSVPALEGFVALLLSQNRTEAAIGLLQDTLKTADQNN 175
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE-------EPRDFRPYLCQGII 301
D KLL+ Q+ V + +AL VY+E + + +P DFRP L +G++
Sbjct: 176 GISSGSIDELSVKLLLGQVYVEGGQLEQALSVYDEAIADAQASSPTQP-DFRPTLAKGLV 234
Query: 302 YTLLRKKDEAEKQFEKFRRLVPRNH 326
K EA+ F++ L P +
Sbjct: 235 LKEQGKDSEAQALFDQAIALAPAQY 259
>gi|356495909|ref|XP_003516813.1| PREDICTED: uncharacterized protein LOC100801971 [Glycine max]
Length = 238
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 43/275 (15%)
Query: 16 LSFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNPKPSLLRTLTPLSSPL 75
L+ NHH S S + SL +SS F F+ +SS AS +P P L+ PL +
Sbjct: 4 LTLNHHPQSLRASFHY-SLTLSTTSSIF-FNPHHSSSVVASLSDPDPKSLQFFNPLRK-V 60
Query: 76 IKITSVTVAAAALLFMRLPFHS-IKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEK 134
+VT A+AA LF+ + IK ++++ V+ ++ E+
Sbjct: 61 PSFVTVTAASAAFLFLGFCRNGFIKKSLSSVVSIQEGLDGKG--------------MLEE 106
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
E+ + HL + + + RI +E WQ+LKA+V +
Sbjct: 107 EEPVVLHLKLKKR-VPIVHDFKKTRI-------------------ADEEAWQVLKAEVFN 146
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK- 253
+ E A FEE+L K+ +A+H V+ + + + K I+ AM+RC+K+
Sbjct: 147 SSERFEFAKVRFEEMLEKER---KAFHDCVLEHLERIDECKTLLKEIKVAMDRCEKKNTN 203
Query: 254 -KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
K LR F ++A ++V+E+ AL+ Y+EL K+
Sbjct: 204 LKCSLRFFSKVVAHVRVLEANMLHALKYYKELDKD 238
>gi|425437534|ref|ZP_18817949.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9432]
gi|389677479|emb|CCH93590.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9432]
Length = 272
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 125/262 (47%), Gaps = 27/262 (10%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAA-ATVESTNESTKDTTSAREDVSYEEK-EKEI 138
+++ +LF L F SI P +A+ + + ++ +S + K A + + Y+ E+E+
Sbjct: 11 LSIGLILMLFALLSF-SIMPLLASILQSQHSSGQSHLSAVKQEELASQALGYQMVLEREL 69
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQS 194
+ AL+ L+++R++ L +A++ +++L +L P + ++ LL K Q++
Sbjct: 70 DNQ--------TALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIED 121
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKE 251
YAG A + +L P + A GL + ++ ++ V+ I++A++
Sbjct: 122 YAG----ATASYRSLLASHPQNLRALTGLTNLFLSQNRHTEAISLVKDTIDRALKAAADP 177
Query: 252 KKKSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ L D +LL+ +I + + EAL Y++ + + DFRP L I+ K
Sbjct: 178 NNPASLIDIVSVQLLLGKIYFEQQNYPEALNTYKQAQQMDVNDFRPILATAIVLKEQGKN 237
Query: 309 DEAEKQFEKFRRLVPRNHPYRE 330
EA+ F++ P YRE
Sbjct: 238 QEAQPLFQEALSRAP--FAYRE 257
>gi|357119048|ref|XP_003561258.1| PREDICTED: uncharacterized protein LOC100822297 [Brachypodium
distachyon]
Length = 393
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 30/233 (12%)
Query: 118 STKDTTSAREDVSYEEKEK------EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
S K++T + +S EEK K E+ L +PND AL+ ++ + +A D+
Sbjct: 151 SNKESTVVNKQLSTEEKTKFERALKGFEEALVKSPNDPTALEGAAVSLVELGEYEKASDL 210
Query: 172 IDRLIELEPNEFE-WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
+++L+++ P++ E ++LL K +++ Y G S + D + + HGL +
Sbjct: 211 LEKLVKVIPDKAEAYRLLGEVKFELRDYEGSSSSYRNALSS---SDDIDFDVLHGLTNSL 267
Query: 228 DGSDK-------------KLNEVEKR----IEKAMERCKKEKKKSDLRDFKLLIAQIKVM 270
+ K KLNE + +E A + +E + DL LL+ +
Sbjct: 268 VAAKKPDQAVEVILSCRQKLNEKSQTQRTDLEAANDNGAQESQDIDLIQVDLLLGKAYSD 327
Query: 271 ESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
S+A+ VY++L+ E P DFR YL +GI+ K +AE+ F + + P
Sbjct: 328 WGHISDAVTVYDKLITEHPEDFRGYLAKGIVLKQNGKAGDAERMFIQAKFFAP 380
>gi|159029354|emb|CAO90730.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 272
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 92/182 (50%), Gaps = 14/182 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYAGESEA 201
P++ AL+ L+++R++ L +A++ +++L +L P + ++ LL K Q++ YAG
Sbjct: 69 PDNQTALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYAG---- 124
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKEKKKSDLR 258
A + +L P + A GL + ++ ++ V+ I++A++ + L
Sbjct: 125 ATASYRSLLVSHPQNLRALTGLTNLFLSQNRHTEAISLVKDTIDRALKAAADPNNPASLI 184
Query: 259 DF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
D +LL+ +I + + EAL Y++ + + DFRP L I+ K EA+ F
Sbjct: 185 DIVSVQLLLGKIYFEQQNYPEALNAYKQAQQMDVNDFRPILATAIVLKEQGKNQEAQPLF 244
Query: 316 EK 317
++
Sbjct: 245 QE 246
>gi|425438829|ref|ZP_18819171.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9717]
gi|389717296|emb|CCH98581.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9717]
Length = 276
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
+++ +LF L F SI P + + ++S + S + SA + + +
Sbjct: 11 LSIGLVLMLFALLSF-SIMPLLTS------ILKSQHSSGQSHLSAVKQEELASQALGYQM 63
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYA 196
L P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ YA
Sbjct: 64 VLEREPDNQAALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYA 123
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKEKK 253
G A + +L P + A GL + ++ ++ V+ +++A++
Sbjct: 124 G----ATGSYRALLASHPQELRALTGLTNLFLSQNRPIEAISLVKDTLDRALKAAADPNN 179
Query: 254 KSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ L D +LL+ +I + + EAL Y++ + + DFRP L I+ K E
Sbjct: 180 PASLIDIVSVQLLLGKIYFEQQNYPEALNAYKQAQQMDVNDFRPILAAAIVLKEQGKNQE 239
Query: 311 AEKQFE 316
A+ F+
Sbjct: 240 AQPLFQ 245
>gi|425460709|ref|ZP_18840190.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9808]
gi|389826562|emb|CCI22812.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9808]
Length = 272
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 95/195 (48%), Gaps = 16/195 (8%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYAGESEA 201
P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ YAG
Sbjct: 69 PDNQAALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYAG---- 124
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKEKKKSDLR 258
A + +L P + A GL + ++ ++ V+ I++A++ + L
Sbjct: 125 ATASYRSLLASHPQNLRALTGLTNLFLSQNRHTEAISLVKDTIDRALKAAADPNNPASLI 184
Query: 259 DF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
D +LL+ +I + + EAL Y++ + + DFRP L I+ K EA+ F
Sbjct: 185 DIVSVQLLLGKIYFEQQNYPEALNAYKQAQQMDVNDFRPILATAIVLKEQGKNQEAQPLF 244
Query: 316 EKFRRLVPRNHPYRE 330
++ P YRE
Sbjct: 245 QEALSRAP--FAYRE 257
>gi|425452433|ref|ZP_18832250.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
7941]
gi|389765754|emb|CCI08427.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
7941]
Length = 272
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 124/262 (47%), Gaps = 27/262 (10%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAA-ATVESTNESTKDTTSAREDVSYEEK-EKEI 138
+++ +LF L F SI P + + + + ++ +S + K A + + Y+ E+E+
Sbjct: 11 LSIGLILMLFALLSF-SIMPLLTSILQSQHSSGQSHLSAVKQEELASQALGYQMVLEREL 69
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQS 194
+ AL+ L+++R++ L +A++ +++L +L P + ++ LL K Q++
Sbjct: 70 DNQ--------TALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIED 121
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKE 251
YAG A + +L P + A GL + ++ ++ V+ I++A++
Sbjct: 122 YAG----ATASYRSLLASHPQNLRALTGLTNLFLSQNRHTEAISLVKDTIDRALKAAADP 177
Query: 252 KKKSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ L D +LL+ +I + + EAL Y++ + + DFRP L I+ K
Sbjct: 178 NNPASLIDIVSVQLLLGKIYFEQQNYPEALNTYKQAQQMDVNDFRPILATAIVLKEQGKN 237
Query: 309 DEAEKQFEKFRRLVPRNHPYRE 330
EA+ F++ P YRE
Sbjct: 238 QEAQPLFQEALSRAP--FAYRE 257
>gi|427723063|ref|YP_007070340.1| hypothetical protein Lepto7376_1143 [Leptolyngbya sp. PCC 7376]
gi|427354783|gb|AFY37506.1| TPR domain-containing protein [Leptolyngbya sp. PCC 7376]
Length = 299
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 10/225 (4%)
Query: 108 AAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVE 167
AAAT NE+ +D A + E++ + E L P + AL+ L++ +++ +
Sbjct: 46 AAATEAQLNETVEDPAIA----TLEKEAQSYEVWLQKEPKNERALRGLIDAQLQLGNISG 101
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
AV +D L +L N ++ +L QV+ A + E A F++IL D +A G+V
Sbjct: 102 AVAPLDTLAQLNQNNDDYAILLGQVKQKAKDYEGAAAEFKKILFVDATHTKALQGMVDLM 161
Query: 228 ------DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
+G+ L + K + K E + +L++ Q+ V + +++EA+ +Y
Sbjct: 162 LEQNRPEGAIGLLQQTLKDMGKPKADQTIEIDPEKVTSIQLMLGQVYVDQERNTEAIAIY 221
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++ DFRP L + ++ K +A+ F L P +
Sbjct: 222 DQAASINKTDFRPVLAKAMVLKNQGKDTQAKPLFTTAVTLAPAKY 266
>gi|425470869|ref|ZP_18849729.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9701]
gi|389883373|emb|CCI36247.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9701]
Length = 279
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 117/247 (47%), Gaps = 21/247 (8%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
+++ +LF L F ++ P + + ++S + S + SA + + +
Sbjct: 11 LSIGLVLMLFALLSFSTM-PLLTS------VLQSRHSSGQSHLSAVKQEELASQALGYQM 63
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYA 196
L P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ YA
Sbjct: 64 VLEREPDNQTALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYA 123
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
G A + +L P + A GL ++ + S + ++ V+ I +A++
Sbjct: 124 G----ATGSYRALLASQPQDLRALTGLTNLFLSQNRSIEAISLVKDTINRALKAGSDPNN 179
Query: 254 KSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ L D +LL+ +I + + EAL Y++ + + DFRP L I+ K E
Sbjct: 180 SASLIDIVSVQLLLGKIYFEQQNYPEALNAYKQAQQMDVNDFRPILATAIVLKEQGKNQE 239
Query: 311 AEKQFEK 317
A+ F++
Sbjct: 240 AQPLFQE 246
>gi|56751829|ref|YP_172530.1| hypothetical protein syc1820_d [Synechococcus elongatus PCC 6301]
gi|81301089|ref|YP_401297.1| TPR repeat-containing protein [Synechococcus elongatus PCC 7942]
gi|56686788|dbj|BAD80010.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169970|gb|ABB58310.1| TPR repeat [Synechococcus elongatus PCC 7942]
Length = 310
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +P+++ AL++L+ V ++ Q+L A+ + RL L+P + +++L AQ Q+ G+ EA
Sbjct: 95 LQRDPDNLSALRSLIGVYLQQQQLQAAIAPLQRLARLQPQQPAYRVLLAQTQAQLGDREA 154
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK-----SD 256
A + + +IL P +EA G +L +K+ A++ +K ++ +D
Sbjct: 155 AAQTYRQILETAPTNLEALRGFT--------QLLLTQKQPTAAVDLLQKARQTDKITPAD 206
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRP 294
L++AQ+ + + +A+ +Y+ + RDFRP
Sbjct: 207 QVSIDLMLAQVYANQGQIDDAIALYDRSAQNNGRDFRP 244
>gi|390441808|ref|ZP_10229839.1| conserved exported hypothetical protein [Microcystis sp. T1-4]
gi|389834862|emb|CCI33965.1| conserved exported hypothetical protein [Microcystis sp. T1-4]
Length = 276
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 93/182 (51%), Gaps = 14/182 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYAGESEA 201
P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ YAG
Sbjct: 69 PDNQTALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYAG---- 124
Query: 202 AIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKS--- 255
A + +L P + A GL ++ + S + ++ V++ I++A + +
Sbjct: 125 ATGSYRSLLASHPQDLRALTGLTNLFLSQNRSIEAISLVKETIDRAFKAAADPNNPASSI 184
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
D+ +LL+ +I + + EAL Y++ + + DFRP L I+ K EA+ F
Sbjct: 185 DIVSVQLLLGKIYFEQQNYPEALNAYKQAQQMDVNDFRPILATAIVLKEQGKNQEAQPLF 244
Query: 316 EK 317
++
Sbjct: 245 QE 246
>gi|166365260|ref|YP_001657533.1| hypothetical protein MAE_25190 [Microcystis aeruginosa NIES-843]
gi|166087633|dbj|BAG02341.1| hypothetical protein MAE_25190 [Microcystis aeruginosa NIES-843]
Length = 276
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 90/181 (49%), Gaps = 14/181 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYAGESEA 201
P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ YAG
Sbjct: 69 PDNQTALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYAG---- 124
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKEKKKSDLR 258
A + +L P + A GL + ++ ++ V+ +++A++ + L
Sbjct: 125 ATASYRALLASHPQELRALTGLTNLFLSQNRPIEAISLVKDTLDRALKAAADPNNPASLI 184
Query: 259 DF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
D +LL+ +I + + EAL Y++ + + DFRP L I+ K EA+ F
Sbjct: 185 DIVSVQLLLGKIYFEQQNYPEALNAYKQAQQMDVNDFRPILAAAIVLKEQGKNQEAQPLF 244
Query: 316 E 316
+
Sbjct: 245 Q 245
>gi|425467516|ref|ZP_18846796.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9809]
gi|389829693|emb|CCI28780.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9809]
Length = 276
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 115/246 (46%), Gaps = 21/246 (8%)
Query: 81 VTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
+++ +LF L F SI P + + ++S + S + SA + + +
Sbjct: 11 LSIGLVLMLFALLSF-SIMPLLTS------ILKSQHSSGQSHLSAVKQEELASQALGYQM 63
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL----KAQVQSYA 196
L P++ AL+ L++ R++ L +A++ +++L +L P + ++ LL K Q++ YA
Sbjct: 64 VLEREPDNQAALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIEDYA 123
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIEKAMERCKKEKK 253
G A + +L P + A GL + ++ ++ V+ +++A++
Sbjct: 124 G----ATASYRALLASHPQELRALTGLTNLFLSQNRPIEAISLVKDTLDRALKAAADPNN 179
Query: 254 KSDLRDF---KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ L D +LL+ +I + + EAL Y++ + + DFRP + I+ K E
Sbjct: 180 PASLIDIVSVQLLLGKIYFEQQNYPEALNAYKQAQQMDVNDFRPIVAAAIVLKEQGKNQE 239
Query: 311 AEKQFE 316
A+ F+
Sbjct: 240 AQPLFQ 245
>gi|223935536|ref|ZP_03627453.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223895946|gb|EEF62390.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 1072
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P+++ A Q L E + ++ EA+ +ID+++ +P F++ L + G+S A+
Sbjct: 262 PDNLPAWQALAETALSEKQFDEAMAIIDKVLIRDPENFDFLQLHGRTYLGKGDSAKALAE 321
Query: 206 FEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKE----------- 251
FE+ +R P +A++ L +A + S K L +++ + A+ R E
Sbjct: 322 FEKTVRLYPQSPQAFYHLALAQMVANDSPKALGSLKQAL--ALNRSYPEAQLLSAEIYIR 379
Query: 252 ---------------KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
+++ L +LL+A+ ++EAL +Y++L + P + +
Sbjct: 380 SGDLNSAVALLTQLVRQQPRLVQAQLLLAEAYRARGNYAEALGIYDQLRQSFPHEPQYVY 439
Query: 297 CQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
G+ + + KK+EA+K FEK + P N P E V+
Sbjct: 440 KAGLTFIQMNKKEEAQKAFEKVLVMSPDNLPALEQIVN 477
>gi|226508942|ref|NP_001142930.1| uncharacterized protein LOC100275367 [Zea mays]
gi|195611586|gb|ACG27623.1| hypothetical protein [Zea mays]
Length = 220
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%)
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+LL AQ+ ++ K EA+ +EEL +E+P D+RP CQG++Y L ++ E+E E+ R
Sbjct: 129 RLLAAQVLFVDGKLDEAIAAFEELAREDPADYRPLFCQGVLYLALGREAESESMLERCRE 188
Query: 321 L 321
+
Sbjct: 189 V 189
>gi|413938274|gb|AFW72825.1| hypothetical protein ZEAMMB73_712860 [Zea mays]
Length = 220
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
+LL AQ+ ++ K EA+ +EEL +E+P D+RP CQG++Y L ++ E+E E+ R
Sbjct: 129 RLLAAQVLFVDGKLDEAIAAFEELAREDPADYRPLFCQGVLYLALGREAESESMLERCR 187
>gi|259490249|ref|NP_001159009.1| uncharacterized protein LOC100304002 [Zea mays]
gi|195628128|gb|ACG35894.1| hypothetical protein [Zea mays]
Length = 220
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
+LL AQ+ ++ K EA+ +EEL +E+P D+RP CQG++Y L ++ E+E E+ R
Sbjct: 129 RLLAAQVLFVDGKLDEAIAAFEELAREDPADYRPLFCQGVLYLALGREAESESMLERCR 187
>gi|427718255|ref|YP_007066249.1| hypothetical protein Cal7507_3002 [Calothrix sp. PCC 7507]
gi|427350691|gb|AFY33415.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 292
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 146 PNDIEALQTLMEVRIK--SQKLVEAVDVI---DRLIELEPNEFEWQLLKAQVQSYAGESE 200
P + AL+ L++ R++ SQK + VI ++L +L P + E+ +L AQ + G+ E
Sbjct: 74 PENQTALKGLLQARLQLLSQKQGDIQGVIAPLEKLAKLNPEQTEYAVLLAQAKQQIGDKE 133
Query: 201 AAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
A + + +L P ++A G+V + + + ++ + + + + D
Sbjct: 134 GAAQAYRTVLATKPGDLKALQGMVALLLDQQRPEAAIGLLQDTLSASNQTNTIQPGSVDT 193
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
++L+ + + ++ +A+ Y++ +K++ +DFRP L + ++ K EA+ F+
Sbjct: 194 IAVQVLLGSVHASQKRYPQAIAAYDQAIKKDAKDFRPVLAKAMLLKRQGKAAEAKPLFDS 253
Query: 318 FRRLVPRNH 326
L P +
Sbjct: 254 ASALAPAQY 262
>gi|170079240|ref|YP_001735878.1| hypothetical protein SYNPCC7002_A2646 [Synechococcus sp. PCC 7002]
gi|169886909|gb|ACB00623.1| TPR domain containing protein [Synechococcus sp. PCC 7002]
Length = 266
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 22/184 (11%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E+ ++ E L PN+ +AL+ L++ +K L + +D L ++ + ++ +L Q
Sbjct: 33 EKDQQSYEIWLEKEPNNEKALRGLLDTSLKLNDLEKTATALDGLAQIHRDNPDYLVLLGQ 92
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V+ A + E A ++++L DP + A G+V L V+ R E A+E +
Sbjct: 93 VEQEAKDYEGAAATYKKVLLTDPTHINALQGMV--------DLLLVQNRPEGAIELLQTT 144
Query: 252 KKKSD--------------LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
K + +L++ QI V + + EA+ +Y++ DFRP L
Sbjct: 145 LKDMGQLTEDETIDIDPEKVTSIQLMLGQIYVAQKRFGEAIAIYDQAATVNKTDFRPVLA 204
Query: 298 QGII 301
+ ++
Sbjct: 205 KAMV 208
>gi|308799671|ref|XP_003074616.1| unnamed protein product [Ostreococcus tauri]
gi|116000787|emb|CAL50467.1| unnamed protein product [Ostreococcus tauri]
Length = 400
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 13/194 (6%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E+ L A P D + L+ + + +A+ ++RL+ ++P+ E A+ G
Sbjct: 194 VEEALTAAPEDADKLRQAAQSWLALDDYPKALPFLERLVAIDPSNEENVSALAETWIADG 253
Query: 198 ESEAAIKGFE-----EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
+ A++ + E+L K P + L D K R A+E K
Sbjct: 254 QPSRAVEAYRGIIDAEVLGKGPSSAPSSSFLRGYLDALGKA-----GRNGLALEYAKTFS 308
Query: 253 KKS--DLRDFKLLIAQIKVMESKHS-EALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
KK D D +LL A++ H EA + ++E+V P DFR +L QG+ Y + K D
Sbjct: 309 KKGWVDDVDSQLLQARVYSAWKGHGKEADQAFQEVVDAHPDDFRAHLAQGVFYRQVGKPD 368
Query: 310 EAEKQFEKFRRLVP 323
AE F K + L P
Sbjct: 369 AAENSFRKAKSLAP 382
>gi|302340547|ref|YP_003805753.1| hypothetical protein Spirs_4077 [Spirochaeta smaragdinae DSM 11293]
gi|301637732|gb|ADK83159.1| Tetratricopeptide TPR_2 repeat protein [Spirochaeta smaragdinae DSM
11293]
Length = 820
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Query: 126 REDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW 185
RE S EE K I+ A P+D+ ++ I + K+ +A ++ L++ +P+ E
Sbjct: 286 RETESPEEALKSIQALAAEFPDDVALQLRFVQAYIDAGKVHKAGVILAPLLKNDPDNGEA 345
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY-HGLVMAYDGSDKKLNEVEKRIEKA 244
L +++ G+ E A + F+ L+KDP +EA+ H MA DG + +E+A
Sbjct: 346 HCLMGRIRRQQGKKELAEQHFKLALKKDPPAIEAWLHLAYMAKDGGE---------VEQA 396
Query: 245 MERCKKE-KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGII 301
M + K D + LL+A++ + ++ ++EAL +Y+EL E+ D R + G++
Sbjct: 397 MGAVGHYLEAKGDSHEGSLLLAELLIQKNLYTEALEMYQELYAEDSLDQR--ILTGLV 452
>gi|75906889|ref|YP_321185.1| hypothetical protein Ava_0666 [Anabaena variabilis ATCC 29413]
gi|75700614|gb|ABA20290.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 293
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 169 VDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD 228
++ +++L +L PN+ E+ +L AQ + G+ E A + IL P ++A G+V+
Sbjct: 103 IEPLEKLAKLNPNQSEYGVLLAQAKQQIGDKEGAATAYRSILDTKPGDLKALQGMVVLLL 162
Query: 229 GSDK---KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELV 285
+ + ++ + A + + D+ ++L+ + + ++ +A+ +++ +
Sbjct: 163 DQQRPEAAVGLLQDTLTNANQANTIQPGSVDVVAVQVLLGNVHAAQKRYPQAISAFDQAI 222
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+++ +DFRP L + ++ K EA+ F+ L P +
Sbjct: 223 QKDTKDFRPVLAKAMLLKQQGKASEAKPLFDSALALAPAQY 263
>gi|17229191|ref|NP_485739.1| hypothetical protein all1699 [Nostoc sp. PCC 7120]
gi|17135519|dbj|BAB78065.1| all1699 [Nostoc sp. PCC 7120]
Length = 293
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 169 VDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD 228
++ +++L +L PN+ E+ +L AQ + G+ E A + IL P ++A G+V+
Sbjct: 103 IEPLEKLAKLNPNQSEYGVLLAQAKQQIGDKEGAATAYRSILDTKPGDLKALQGMVVLLL 162
Query: 229 GSDK---KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELV 285
+ + ++ + A + + D+ ++L+ + + ++ +A+ +++ +
Sbjct: 163 DQQRPEAAVGLLQDTLTNAAQANTIQPGSVDVVAVQVLLGNVHAAQKRYPQAISAFDQAI 222
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+++ +DFRP L + ++ K EA+ F+ L P +
Sbjct: 223 QKDTKDFRPVLAKAMLLKQQGKATEAKPLFDSALALAPAQY 263
>gi|242066358|ref|XP_002454468.1| hypothetical protein SORBIDRAFT_04g031670 [Sorghum bicolor]
gi|241934299|gb|EES07444.1| hypothetical protein SORBIDRAFT_04g031670 [Sorghum bicolor]
Length = 228
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+LL AQ ++ EA+ +EEL +E+P D+RP CQG++Y +L K+ E+E E+ R
Sbjct: 135 RLLAAQALFVDGMVDEAIAAFEELAREDPADYRPLFCQGVLYLVLGKEAESESMLERCRE 194
Query: 321 L 321
+
Sbjct: 195 V 195
>gi|255073629|ref|XP_002500489.1| predicted protein [Micromonas sp. RCC299]
gi|226515752|gb|ACO61747.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 23/196 (11%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E+ LA+ P D++ L+ E + + A+ ++ RL+E++P+ L A V + G
Sbjct: 236 EEALASTPEDVDKLRGAAESYVVLEDYTAAIPLLKRLLEIQPSVENVGNL-ADVYAANGS 294
Query: 199 SEAAIKGFEEILR--------KDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
A + + + + K P V+ GLV A D + R ++E KK
Sbjct: 295 LAKAAEVYRDAVNAEWSGASLKPPALVK---GLVDALD--------KDGRYGLSLEYVKK 343
Query: 251 --EKKKSDLRDFKLLIAQIKVMESKHS-EALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
EK + D D LL A++ HS EA + Y++++ DFR YL +G+ Y + K
Sbjct: 344 FREKGQVDDVDGALLEARVYSGWKGHSKEAEKAYQDVIDTHGDDFRGYLAKGVFYREIGK 403
Query: 308 KDEAEKQFEKFRRLVP 323
D AE F + + LVP
Sbjct: 404 PDAAEGMFRQAKALVP 419
>gi|357143168|ref|XP_003572826.1| PREDICTED: uncharacterized protein LOC100827083 [Brachypodium
distachyon]
Length = 250
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
+L AQ ++ K EA+ +EEL +E+P D+RP CQG++Y++L ++ E++ E+ R
Sbjct: 150 RLFAAQTLFVDGKVEEAIAAFEELAREDPGDYRPLFCQGVLYSMLGRETESDSILERCR 208
>gi|443477290|ref|ZP_21067148.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
gi|443017618|gb|ELS32020.1| Tetratricopeptide TPR_1 repeat-containing protein [Pseudanabaena
biceps PCC 7429]
Length = 291
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 120/247 (48%), Gaps = 11/247 (4%)
Query: 83 VAAAALLFMRLPFH--SIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQ 140
+ L+ + L F SI P I + A T ++ N ++T S +E + + + E
Sbjct: 10 IINGVLIVVTLSFLGVSIAPLIGG-LFAPPTQQAANNPAQNT-SEQERIKIQIEG--FEA 65
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
L ++P + AL L+ +R + K E ++ + L + P++ E+++ A+ + +
Sbjct: 66 VLKSDPKNQTALIGLVNLRNQLGKTKETIEPLQTLADTFPDQPEYRMTLARTYIQLKDPK 125
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKK----LNEVEKRIEKAMERCKKEKKKSD 256
A + +IL P + A LV + + +DK+ + ++ ++ A K + D
Sbjct: 126 NASAEYRKILTTKPGYIPAIQSLV-SIELTDKRPEAAIGILQDTLKTAETANKIQANTVD 184
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
+ ++ ++ +++ +++ Y++++K+ +DFRPY+ + + + K DEA+K F+
Sbjct: 185 TGSVRWILGEVYRQQNRIDDSIATYDQMIKDNAKDFRPYVGKAQLRQVQGKDDEAKKLFD 244
Query: 317 KFRRLVP 323
K L P
Sbjct: 245 KGLELAP 251
>gi|168029761|ref|XP_001767393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681289|gb|EDQ67717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
++ E+ L +P+D +AL+ + + ++ + +L++ P + E Q L +V+
Sbjct: 96 EKFEETLKTSPDDRDALEGAGVTYAELGEYSKSATYLTKLVQKVPKDVEAQRLLGEVRYE 155
Query: 196 AGESEAAIKGFEEILRKDPL-RVEAYHGLVMAYDGSDK-------------KLNEVEKRI 241
AG+ + + +R P + GLV A +K +LN +
Sbjct: 156 AGDYAGSATAYRSAVRAAPKDTIGLLQGLVSALLADNKPSEAVGEMLAARTRLNAGPQSP 215
Query: 242 EKAMERCKKEKKKSDLRDFKLLIAQ-IKVMESKHSEALRVYEELVKEEPRDFRPYLCQGI 300
+ E + D ++L+ + E +A+ VY+ L+ P DFR YL +GI
Sbjct: 216 PSSQEGSGNADDRVDPVQVEMLLGKAYSTWEGHTGDAIAVYDNLISSYPDDFRGYLAKGI 275
Query: 301 IYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+ K +AE+ F + R L P P + FVD
Sbjct: 276 LLKDQGKDSDAERMFIQARYLAP---PKAKGFVD 306
>gi|428222112|ref|YP_007106282.1| hypothetical protein Syn7502_02133 [Synechococcus sp. PCC 7502]
gi|427995452|gb|AFY74147.1| hypothetical protein Syn7502_02133 [Synechococcus sp. PCC 7502]
Length = 295
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E L P + AL+ L+++R+K + A++ + L + P +++ + A+++ +
Sbjct: 64 EAVLKREPKNETALKGLIDLRLKLRDFQGAIEPLQVLADANPQVPQYRKILARLRLELKD 123
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AI +++IL +P +E+ LV M + + ++K +E A K +
Sbjct: 124 RTGAIAEYQKILTTNPGELESLQTLVSLEMEDQKPEAAIGLLDKALETADTANKVQPNSV 183
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
D ++ + + + EA+ Y+++ E P+DFRP++ + I L K+ EA+ F
Sbjct: 184 DKPAILWILGNVYTEQKRFPEAIATYDKIATENPKDFRPFVGKAQIKRLEGKEAEAKTLF 243
Query: 316 EKFRRLVP 323
+ +L P
Sbjct: 244 TEAAKLAP 251
>gi|421611914|ref|ZP_16053042.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula baltica
SH28]
gi|408497319|gb|EKK01850.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula baltica
SH28]
Length = 680
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 10/207 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E E + + L PN +++ L + R L EA+ + R EL P E
Sbjct: 458 YLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNGLG 517
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Q G+ EA+ ++ ++ DP +Y G+ L + R E+A+E +K
Sbjct: 518 ATQGMMGDFEASEATLKQAIKIDPNYANSY--------GNLATLRSAQGRNEEAIELFQK 569
Query: 251 EKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + R D + + ++ + + +A++V++ ++ E P D L G+I ++ +
Sbjct: 570 AVQLAPERMDHRTNLGRVLMSAERWEDAIQVWQSVLDESPEDVSALLNLGVIAANQQRTE 629
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNM 336
+A FE+ +VP NH Y + M
Sbjct: 630 DAIGYFERVLEIVP-NHLSATYNLGAM 655
>gi|262197790|ref|YP_003268999.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262081137|gb|ACY17106.1| Tetratricopeptide TPR_2 repeat protein [Haliangium ochraceum DSM
14365]
Length = 1402
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 16/206 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P D+EA L+E ++ K A + RL++L+P + E L A+V + +AA+
Sbjct: 587 PADVEAGYLLVEAYLRDNKFNSAERELQRLLKLDPKDTEALELLAKVAERTYDYDAAVAH 646
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA 265
E + P R Y + +D+K +E + +A+E + + +A
Sbjct: 647 LERLAELSPNRRRDYFNRIAELKTADRKDDEALEYARRALEASPNDPLAYE------RLA 700
Query: 266 QIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ V + EA Y + ++ +PR FR Y +++T E E+ E +R ++ R
Sbjct: 701 ERYVEMQRFDEATEAYAKTIELDPRQFRAYFALALLHT---HNHEPERAAELYREVLRRA 757
Query: 326 HPYREYFVDNMVATKIFGEKVDRESM 351
D + + E +D E M
Sbjct: 758 S-------DEQILARAGREAIDLEEM 776
Score = 42.0 bits (97), Expect = 0.41, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 122 TTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN 181
T ++D + E + +E A+PND A + L E ++ Q+ EA + + IEL+P
Sbjct: 670 TADRKDDEALEYARRALE----ASPNDPLAYERLAERYVEMQRFDEATEAYAKTIELDPR 725
Query: 182 EFEWQLLKAQVQSYAGESEAAIKGFEEILRK 212
+F A + ++ E E A + + E+LR+
Sbjct: 726 QFRAYFALALLHTHNHEPERAAELYREVLRR 756
>gi|118353701|ref|XP_001010116.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89291883|gb|EAR89871.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1875
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 92/193 (47%), Gaps = 15/193 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP +E+L L ++ +K L E ++ ++I+++P Q A + +E A+K
Sbjct: 1031 NPKFLESLINLGDICVKQNLLDEGIECFKKIIQIDPYSHYDQFQLALIYQKKYMNEEAVK 1090
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR-----D 259
++++++ +P +A+ L + Y SD+K+ +++A KK K+ + +
Sbjct: 1091 AYKKVIKLNPQHTKAHINLAVIY--SDQKM------LDEAQNCYKKATKQIQIAIMLIIE 1142
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
+ LI +K + + EA+ Y+ ++ E + + G +Y L DEA F+K
Sbjct: 1143 MQKLITILKTTQKSYDEAIACYQSILAIEENNIKALNNLGDVYILQNMFDEALDYFKKI- 1201
Query: 320 RLVPRNHPYREYF 332
L+ + Y YF
Sbjct: 1202 -LLLDSSYYLAYF 1213
Score = 43.5 bits (101), Expect = 0.17, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 102/243 (41%), Gaps = 60/243 (24%)
Query: 128 DVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ- 186
D E+ K +++ + + N +EA + L + K EA+ + IE++PN F Q
Sbjct: 893 DYKTEDSIKYLKKAIEMDENCVEAYEILGFIYQNISKKEEAIKYYKKAIEIDPNHFNTQF 952
Query: 187 ---LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD---------KKL 234
LL Q Q Y + A+ F++++ +P ++Y+ + + Y D KK
Sbjct: 953 NLGLLYYQEQKY----DEALTYFQKVIEINPKSPDSYNNIGLIYYDKDMITEALEYFKKA 1008
Query: 235 NEVEKRIEKAMER-----------------------CKKEK---------KK-------S 255
V+ + ++A C K+ KK S
Sbjct: 1009 LHVDPQYQQAHHNSAVIYLQEINPKFLESLINLGDICVKQNLLDEGIECFKKIIQIDPYS 1068
Query: 256 DLRDFKL-LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
F+L LI Q K M + EA++ Y++++K P+ + ++ +IY+ + DEA+
Sbjct: 1069 HYDQFQLALIYQKKYM---NEEAVKAYKKVIKLNPQHTKAHINLAVIYSDQKMLDEAQNC 1125
Query: 315 FEK 317
++K
Sbjct: 1126 YKK 1128
Score = 41.2 bits (95), Expect = 0.71, Method: Composition-based stats.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 14/188 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+PN EA L + EA D ++ ++PN + + A+ ++E +IK
Sbjct: 842 DPNFAEAHHNLGFTYENKNMIYEAYDCYKSILNIDPNYVKAYISLARNYYLDYKTEDSIK 901
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KL 262
++ + D VEAY L Y KK E K +KA+E D F +
Sbjct: 902 YLKKAIEMDENCVEAYEILGFIYQNISKK-EEAIKYYKKAIE--------IDPNHFNTQF 952
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
+ + E K+ EAL ++++++ P+ Y G+IY KD + E F++ +
Sbjct: 953 NLGLLYYQEQKYDEALTYFQKVIEINPKSPDSYNNIGLIYY---DKDMITEALEYFKKAL 1009
Query: 323 PRNHPYRE 330
+ Y++
Sbjct: 1010 HVDPQYQQ 1017
>gi|302763481|ref|XP_002965162.1| hypothetical protein SELMODRAFT_406352 [Selaginella moellendorffii]
gi|300167395|gb|EFJ34000.1| hypothetical protein SELMODRAFT_406352 [Selaginella moellendorffii]
Length = 336
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 100 PAIAAPVAAA---ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLM 156
PA A P A A E +S+K + + E K + + + P + A + L+
Sbjct: 82 PASAIPDLAKKKRAVAEKPGKSSKVPSRVLRAKANERTLKAVLKTIEEEPGNPVAYKDLL 141
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+R+++ ++ EA++V+ R IELEP E++ ++A+ + G+ + + F E + P
Sbjct: 142 SLRMENGEVREAIEVLGRRIELEPEHLEYRFMRARAYGFVGDVRHSREEFRERVAIQPFS 201
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
+A GL +A + + + ++V + I A +++ R+FK+L+ QI
Sbjct: 202 AKALQGLALAMEKAGEDDSQVLEMIHAA---AIDQQQSFAARNFKMLLGQI 249
>gi|325959562|ref|YP_004291028.1| hypothetical protein Metbo_1834 [Methanobacterium sp. AL-21]
gi|325330994|gb|ADZ10056.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. AL-21]
Length = 693
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E+ L NPND AL V I + +A+ DR++E++ N+ LKA+ Q
Sbjct: 359 LEKALELNPNDQTALMNKASVLISVEDYDDAILYCDRVLEIDSNQVAALFLKARTQQNIA 418
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+ + +I+ E I DP EA+ + + S + LN+ E + + + E K
Sbjct: 419 KFDESIETLERITSIDPDNDEAWFLIGV----SQEYLNKPEDALVSFNKAIEIEPKNIGA 474
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
FK + +M + EAL+ YE + +P ++ + G+I DEA K F+
Sbjct: 475 WYFK---GRSLMMLGRADEALKSYEMVTLMDPENYEAFHLTGLINMEQGNYDEALKNFDA 531
Query: 318 FRRLVPRN 325
+ P N
Sbjct: 532 VLNISPDN 539
>gi|440717677|ref|ZP_20898159.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula baltica
SWK14]
gi|436437297|gb|ELP30953.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula baltica
SWK14]
Length = 680
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E E + + L PN +++ L + R L EA+ + R EL P E
Sbjct: 458 YLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNGLG 517
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Q G+ EA+ ++ + DP +Y G+ L + R E+A+E +K
Sbjct: 518 ATQGMMGDFEASEATLKQAIEIDPNYANSY--------GNLATLRSAQGRNEEAIELFQK 569
Query: 251 EKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + R D + + ++ + + +A++V++ ++ E P D L G+I ++ +
Sbjct: 570 AVQLAPERMDHRTNLGRVLMSAQRWEDAIKVWQSVLDESPEDVSALLNLGVIAANQQRTE 629
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNM 336
+A FE+ +VP NH Y + M
Sbjct: 630 DAIGYFERVLEIVP-NHLSATYNLGAM 655
>gi|22330732|ref|NP_683507.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|26452264|dbj|BAC43219.1| unknown protein [Arabidopsis thaliana]
gi|30725310|gb|AAP37677.1| At1g78915 [Arabidopsis thaliana]
gi|332198053|gb|AEE36174.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 385
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 114 STNESTKDTTSAREDVSYEEKE------KEIEQHLAANPNDIEALQTLMEVRIKSQKLVE 167
++ TK+TT + +S EEK KE E L P D AL+ +
Sbjct: 147 GSDSPTKNTTVVKNQISEEEKATLQQRLKEFETTLNGTPQDQAALEGAAVTLTELGDYSR 206
Query: 168 AVDVIDRLIELEPNEFE-WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
A +++L + P + + ++LL ++ +Y G S AA K E++ + + +E GL
Sbjct: 207 AAAFLEKLAKERPTDPDVFRLLGEVNYELNNYEG-SIAAYKISEKVSKG--IDLEVTRGL 263
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS----------DLRDFKLLIAQIKVMESK 273
+ AY + KK +E K + ER +K + D +LL+ +
Sbjct: 264 MNAYLAA-KKPDEAVKFLLDTRERLNTKKTSTTDSVTDETNLDPIQVELLLGKAYSDWGH 322
Query: 274 HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
S+A+ VY++L+ P DFR YL +GII + +AE+ F + R P
Sbjct: 323 ISDAIAVYDQLISAHPEDFRGYLAKGIILRENGSRGDAERMFIQARFFAP 372
>gi|145341800|ref|XP_001415991.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576214|gb|ABO94283.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 353
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 122 TTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN 181
+ S +E+V +++ + + L+A P D + L+ + + +A+ ++RL+ ++P
Sbjct: 132 SDSVKEEV--QKQADAVVEALSAAPEDADKLRQAAQSFLALDDYPKALPYLERLVAVDPT 189
Query: 182 EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA--------YHGLVMAYDGSDKK 233
E A+ G+ A++ F I+ D L G + A G D
Sbjct: 190 NEENVSALAETWIADGQPRRAVEAFRSIIDADVLGKGQQTAPSPSFLRGFLDAL-GKDG- 247
Query: 234 LNEVEKRIEKAMERCKKEKKKS--DLRDFKLLIAQIKVMESKHSEALRV-YEELVKEEPR 290
R A++ K KK D D +LL A+++ H + + YE ++ E P
Sbjct: 248 ------RNGLALDYAKTFSKKGWVDEVDGRLLEARVQSAWKGHGKDAEIAYEAVITEHPE 301
Query: 291 DFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
DFR YL QG+ + + K D AE F K + L P +
Sbjct: 302 DFRGYLAQGVFFRTVGKPDAAEDAFRKAKSLAPSD 336
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K E+ NP + EAL IK + E++ DR++E+ P+ + K +
Sbjct: 1509 KAFEKAALFNPKNEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVIFCM 1568
Query: 196 AGESEAAIKGFEEILRKDPLRVEA-YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
+ A++ F+ +L++DP ++A Y+ V+ + +KL E R K ++
Sbjct: 1569 LDQYREALRAFDGVLKRDPENIKAIYNVGVVCF---KQKLYETAARAFKEALSINPWHEQ 1625
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
S LR + +A+I ++ EAL+ +E+L++ P+D + +G+I L + EA +
Sbjct: 1626 S-LRYLGISLAKI----GEYEEALKAFEKLLRINPQDVQSMNYRGVILGKLERFGEAIRA 1680
Query: 315 FEKFRRLVPRNHPYRE 330
F++ R+ P RE
Sbjct: 1681 FDEILRIYPDMADARE 1696
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVM 225
A++ ++L P + E Q + ++ G E A++ FE IL + P EA++ GL +
Sbjct: 525 ALETFEKLASENPYDLEIQCRRGKLAMEVGNYETALQAFERILTEKPASREAWYRKGLAL 584
Query: 226 AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLL--IAQIKVMESKHSEALRVYEE 283
KL E+ + KA + K +D D +L AQ+K+ E + AL +E
Sbjct: 585 L------KLENFEEAV-KAFDAVAT--KDADYEDAGVLKGFAQMKLKEC--ASALETFER 633
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREY 331
+++++P + +G+I L++++EA K FE RL P + EY
Sbjct: 634 VLEKKPDSDTAWYYRGMILYTLQRQEEAAKAFESASRLNPGLYTAFEY 681
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 98 IKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLME 157
+ P AA A TV E YEE + E+ L NP D EA
Sbjct: 25 LMPEYAAAWCAMGTVAGKAER------------YEEALENFERALEINPKDSEACYAKGL 72
Query: 158 VRIKSQKLVEAVDVIDRLIELEP---NEFEWQ-LLKAQVQSYAGESEAAIKGFEEILRKD 213
V K +K A++ D L P N E + LL A++ G+ + A++ E+ L+K
Sbjct: 73 VLAKLEKYDSALECFDSLTRENPRNENALEQKCLLLAKI----GKKDLALEALEDFLKKY 128
Query: 214 PLRVEA-YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES 272
P A YH ++ + S + E EK K + + E +++ R L+ +++
Sbjct: 129 PANEAALYHKGILLSELS--RYEEAEKIFSKVL-KLDPENREAWFRKGFALVQLLRL--- 182
Query: 273 KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+EA++ +EE +K +P F + C+ L +EA + F+ R+ P
Sbjct: 183 --NEAIKAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYP 231
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 21/198 (10%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN----EFEWQLLKAQ 191
K E+ + +P+ EA +K + EA++ D ++ + P+ + L +
Sbjct: 187 KAFEEAIKIDPSYFEAWNCRCFALMKLEVYEEALEAFDSMLRIYPDVKDIWYSRALALLK 246
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGS-DKKLNEVEKRIEKAMERC 248
+Q+YA A++ F + DP +A+ GL++A G ++ LN +EK +E
Sbjct: 247 LQNYA----EAVQSFARVTELDPENKDAWLQQGLLLARTGKHEEALNALEKLLEY----- 297
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
D + + L + + EAL E+ +++EP ++ +L +G+I K
Sbjct: 298 -----DPDFTEAQKLRGTVLAGLGRFEEALGPLEKSLEKEPENYNLWLQKGLILLDTGKL 352
Query: 309 DEAEKQFEKFRRLVPRNH 326
+ A FE RL P N
Sbjct: 353 EPAIDAFENAARLNPDNE 370
>gi|334183999|ref|NP_001185430.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198054|gb|AEE36175.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 119 TKDTTSAREDVSYEEKE------KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVI 172
TK+TT + +S EEK KE E L P D AL+ + A +
Sbjct: 169 TKNTTVVKNQISEEEKATLQQRLKEFETTLNGTPQDQAALEGAAVTLTELGDYSRAAAFL 228
Query: 173 DRLIELEPNEFE-WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD 228
++L + P + + ++LL ++ +Y G S AA K E++ + + +E GL+ AY
Sbjct: 229 EKLAKERPTDPDVFRLLGEVNYELNNYEG-SIAAYKISEKVSKG--IDLEVTRGLMNAYL 285
Query: 229 GSDKKLNEVEKRIEKAMERCKKEKKKS----------DLRDFKLLIAQIKVMESKHSEAL 278
+ KK +E K + ER +K + D +LL+ + S+A+
Sbjct: 286 AA-KKPDEAVKFLLDTRERLNTKKTSTTDSVTDETNLDPIQVELLLGKAYSDWGHISDAI 344
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
VY++L+ P DFR YL +GII + +AE+ F + R P
Sbjct: 345 AVYDQLISAHPEDFRGYLAKGIILRENGSRGDAERMFIQARFFAP 389
>gi|115447955|ref|NP_001047757.1| Os02g0684000 [Oryza sativa Japonica Group]
gi|50251909|dbj|BAD27847.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50251932|dbj|BAD27868.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113537288|dbj|BAF09671.1| Os02g0684000 [Oryza sativa Japonica Group]
gi|125540699|gb|EAY87094.1| hypothetical protein OsI_08491 [Oryza sativa Indica Group]
Length = 235
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+LL AQ ++ K +A+ +EEL +E+P D+RP CQ ++Y++L + E+E + R
Sbjct: 138 RLLAAQELFVDGKVDDAIAAFEELAREDPGDYRPVFCQCVLYSVLGRAAESESMLRRCRE 197
Query: 321 L 321
L
Sbjct: 198 L 198
>gi|334184001|ref|NP_001185431.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332198055|gb|AEE36176.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 405
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 24/225 (10%)
Query: 119 TKDTTSAREDVSYEEKE------KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVI 172
TK+TT + +S EEK KE E L P D AL+ + A +
Sbjct: 172 TKNTTVVKNQISEEEKATLQQRLKEFETTLNGTPQDQAALEGAAVTLTELGDYSRAAAFL 231
Query: 173 DRLIELEPNEFE-WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD 228
++L + P + + ++LL ++ +Y G S AA K E++ + + +E GL+ AY
Sbjct: 232 EKLAKERPTDPDVFRLLGEVNYELNNYEG-SIAAYKISEKVSKG--IDLEVTRGLMNAYL 288
Query: 229 GSDKKLNEVEKRIEKAMERCKKEKKKS----------DLRDFKLLIAQIKVMESKHSEAL 278
+ KK +E K + ER +K + D +LL+ + S+A+
Sbjct: 289 AA-KKPDEAVKFLLDTRERLNTKKTSTTDSVTDETNLDPIQVELLLGKAYSDWGHISDAI 347
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
VY++L+ P DFR YL +GII + +AE+ F + R P
Sbjct: 348 AVYDQLISAHPEDFRGYLAKGIILRENGSRGDAERMFIQARFFAP 392
>gi|86605655|ref|YP_474418.1| hypothetical protein CYA_0953 [Synechococcus sp. JA-3-3Ab]
gi|86554197|gb|ABC99155.1| TPR repeat protein [Synechococcus sp. JA-3-3Ab]
Length = 263
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++ AL+ L++ +++ + A++ + +L+ELEP + + AQ+Q G+ E A++
Sbjct: 70 PDNPIALRGLIDTQLQLNEPQGAIEPLKKLVELEPENRQLRAFLAQIQQDTGDLEGALEQ 129
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE-KKKSDLRDFKLLI 264
+ + KDP + L +D +L R +A+E + K+ + D +L +
Sbjct: 130 LQILHEKDPKDSQVLQEL------ADVQL--ALGRPSQAIELLENYLKEVPEDNDVRLRL 181
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTL-----LRKKDEAEKQFEKFR 319
A I V ++ +A+ +Y+E++ +P DF P L + I T LR K A + FE+
Sbjct: 182 AFIYVRNNQTEKAVALYDEMIAADPSDFAPVLGKAIALTSATDENLRAK--APELFEQAA 239
Query: 320 RLVP 323
RL P
Sbjct: 240 RLAP 243
>gi|18378907|ref|NP_563642.1| uncharacterized protein [Arabidopsis thaliana]
gi|8570450|gb|AAF76477.1|AC020622_11 Contains similarity to an unknown protein gi|AAC98059 from
Arabidopsis thaliana BAC gb|AC005896. ESTs gb|AI993547,
gb|R65062 come from this gene [Arabidopsis thaliana]
gi|12083294|gb|AAG48806.1|AF332443_1 unknown protein [Arabidopsis thaliana]
gi|27765018|gb|AAO23630.1| At1g01990 [Arabidopsis thaliana]
gi|110743337|dbj|BAE99556.1| hypothetical protein [Arabidopsis thaliana]
gi|332189242|gb|AEE27363.1| uncharacterized protein [Arabidopsis thaliana]
Length = 245
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 39/202 (19%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKE 137
I ++ VAA+A F RL H P I +PV D+ E KE
Sbjct: 67 IPTIAVAASAWFFFRL--HQYPPIITSPV-----------------DLHLDLEEEGAIKE 107
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+ L + P ++AL +IK +++ +DV D + LKA+++ A
Sbjct: 108 LP--LESKPGYVKALHF---YKIKPGTVLKLLDVFD--------SDSYDSLKARIRLSAE 154
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
E A + EE++ +DP G VM Y +L E+ + +E +++C+K+ K L
Sbjct: 155 WLETARRELEEVVERDP-------GRVMEYSQVVDELMEILRDMEVYIDKCQKDNVKGYL 207
Query: 258 RDFKLLIAQIKVMESKHSEALR 279
R L+A+++ ME++ L+
Sbjct: 208 RSCNRLLARVRRMEAQILNVLK 229
>gi|118346623|ref|XP_976974.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89288557|gb|EAR86545.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 917
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 122 TTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQK--LVEAVDVIDRLIELE 179
T++ R+D+ +++EQ +AANP++ + L + K + + +D I++ I+LE
Sbjct: 480 TSNDRQDI------QKLEQQVAANPSNAQDHAKLASCIFQYDKDNIKKGIDHINKAIQLE 533
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
PN ++ ++ + A E A K F+ + KDP AYH L + E K
Sbjct: 534 PNNSDYYNIQGCLYEKALMIEEAEKSFKIAVEKDPSSSLAYHNLGYMNQKIYQNNEEAVK 593
Query: 240 RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
+KA+E K + +S L F + +A + K +EA + YE+L+K P D + Y G
Sbjct: 594 YYQKAVE--KNSRAESSL--FNIAVAYKD--QKKFAEAKQQYEKLLKINPNDSQIYNNLG 647
Query: 300 IIYT 303
+Y
Sbjct: 648 FLYV 651
>gi|443314063|ref|ZP_21043657.1| tetratricopeptide repeat protein,protein kinase family protein
[Leptolyngbya sp. PCC 6406]
gi|442786335|gb|ELR96081.1| tetratricopeptide repeat protein,protein kinase family protein
[Leptolyngbya sp. PCC 6406]
Length = 598
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 39/299 (13%)
Query: 58 QNPKPS--LLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAA--------PVA 107
++P+ S + R LT + SPL + V R +HS A A PV
Sbjct: 224 KDPRTSEVMWRDLTSVQSPLADVIDKMVRYD----FRQRYHSAGEAFQALQAAISPTPVV 279
Query: 108 AAATVESTNESTKDTTSAREDVSYEEKEKEIEQH-------------LAANPNDIEALQT 154
AT +T + T + +++ E+ E+ Q + P+ + A
Sbjct: 280 VPATSLATGITPTPATFSESHLAWLERADELFQQNRFADALPWYDKVVQIQPDAVTAWFK 339
Query: 155 LMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
L + AV DR+++L+P+++ L + G E A+ +EE+LR P
Sbjct: 340 LALAQENLGNPEAAVVAYDRVLQLQPDDYLAWLKRGNALEQLGRMEGALAAYEEVLRIQP 399
Query: 215 LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK--KSDLRDFKLLIAQIKVMES 272
++ L ++LNE++ I A R + K + L + K L+ +K +E+
Sbjct: 400 DNYWVWNDL----GQIQERLNELDTAI-AAYNRAIQLKPDFQLALENRKRLLIALKRVEA 454
Query: 273 KHS-----EALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++ E + ++ +++ PRD +L +G+ L++ EA + + +L P +H
Sbjct: 455 LYTLHHYEETITACDQAIQDNPRDVDVWLMRGMALENLKRMPEAAMAYNRVVQLQPEDH 513
>gi|449132610|ref|ZP_21768625.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula europaea 6C]
gi|448888289|gb|EMB18611.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula europaea 6C]
Length = 680
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 88/207 (42%), Gaps = 10/207 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E E + + L PN +++ L + R L EA+ + +R EL P E
Sbjct: 458 YLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYNRATELNPGLAEAYNGLG 517
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Q G+ EA+ + + DP AY G+ L + R E+A+E +K
Sbjct: 518 ATQGMMGDFEASEATLKRAIEIDPNYANAY--------GNLATLRSAQGRNEEAIELFQK 569
Query: 251 EKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + R D + + ++ + + +A+ V++ ++ E P D L G+I ++
Sbjct: 570 AVQLAPERMDHRTNLGRVLMSAQRWEDAIDVWQSVLDESPDDVSALLNLGVIAANQQRTK 629
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNM 336
+A FE +VP NH Y + M
Sbjct: 630 DAIGYFESVLEIVP-NHLSATYNLGAM 655
>gi|443327105|ref|ZP_21055739.1| putative glycosyltransferase [Xenococcus sp. PCC 7305]
gi|442793312|gb|ELS02765.1| putative glycosyltransferase [Xenococcus sp. PCC 7305]
Length = 1306
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 19/197 (9%)
Query: 137 EIEQHLAANPN------DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
E +Q+L+AN N I+ L T V+ K+ K+ EA+++ +LIEL+ N+F W + +
Sbjct: 103 EKQQNLSANINGQENKEKIDDLHTQAVVKHKAGKIEEAIEIYLKLIELDENQFSW--IYS 160
Query: 191 QVQSYAGESEAAIKGFE---EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMER 247
+ + + KG E + L+ P E + L + Y G D + K +E
Sbjct: 161 NAITLLCQLKLIDKGLELGGKALKMYPDSDEIHRSLGLVYKGQDNE----SKSVEHYQTA 216
Query: 248 CKKEKKKSDLRDFKLLIAQIKVME-SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
+ ++ D L ++ME SK S+AL+V + + + P+ + Y C G +
Sbjct: 217 IRLNPQQPDWLYCNL---ANQLMECSKVSQALKVIQAGIHQHPKSYILYYCLGEAFIKQG 273
Query: 307 KKDEAEKQFEKFRRLVP 323
D+A K F+ R L P
Sbjct: 274 DLDQALKVFKDTRCLNP 290
>gi|32477513|ref|NP_870507.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1]
gi|32448067|emb|CAD77584.1| O-GlcNAc transferase [Rhodopirellula baltica SH 1]
Length = 680
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 10/207 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E E + + L PN +++ L + R L EA+ + R EL P E
Sbjct: 458 YLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNGLG 517
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Q G+ EA+ ++ + DP +Y G+ L + R E+A+E +K
Sbjct: 518 ATQGMMGDFEASEATLKQAIEIDPNYANSY--------GNLATLRSAQGRNEEAIELFQK 569
Query: 251 EKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + R D + + ++ + + +A +V++ ++ E P D L G+I ++ +
Sbjct: 570 AVQLAPERMDHRTNLGRVLMSAQRWEDASKVWQSVLDESPEDVSALLNLGVIAANQQRTE 629
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNM 336
+A FE+ +VP NH Y + M
Sbjct: 630 DAIGYFERVLEIVP-NHLSATYNLGAM 655
>gi|384210167|ref|YP_005595887.1| hypothetical protein Bint_2713 [Brachyspira intermedia PWS/A]
gi|343387817|gb|AEM23307.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 853
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 19/201 (9%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP-NE---FEWQ 186
Y+E ++ + + NPN+ +A ++K +K EA++ +++I+L P NE F
Sbjct: 71 YDEAIEDFNKAIKLNPNNEKAYFNRGITKVKLEKYEEAIEDFNKIIKLNPKNERGYFNIG 130
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKA 244
KA ++ Y E AIK F E+++ + EAY GL KL + ++ IE
Sbjct: 131 FAKASLEKY----EEAIKDFNEVIKLNTKNEEAYFFRGLAKV------KLEKDKEAIEDF 180
Query: 245 MERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTL 304
+ K K + F IA+ K+ + EA++ + E++K P + + YL +GI +
Sbjct: 181 NKSIKLNSKNEEAY-FNRGIAKTKL--EIYEEAIKDFNEVIKLNPNNEKAYLARGIAKSY 237
Query: 305 LRKKDEAEKQFEKFRRLVPRN 325
L + +EA K F + +L P N
Sbjct: 238 LEEYEEAIKDFNEVIKLNPNN 258
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 14/179 (7%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLV 224
EA+ + +I+L PN + L + +SY E E AIK F E+++ +P +AY G+
Sbjct: 209 EAIKDFNEVIKLNPNNEKAYLARGIAKSYLEEYEEAIKDFNEVIKLNPNNEKAYLARGIA 268
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
G K EV + KA+E + F IA+ K+ K+ EA+ + +
Sbjct: 269 KIESG---KHEEVIEDFNKAIELNPNNENAY----FNRGIAKAKL--EKYEEAVVDFNKA 319
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFG 343
+K + + Y +GI L K +EA E F + + N Y + + + + FG
Sbjct: 320 IKLNKNNEKTYFSRGITKVKLEKYEEA---IEDFNKAIGLNKSYNKAYFNRGILKINFG 375
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEI 209
+AL+ +E I S+K+ +A+ +++R IE N+ + + ++ S + AI+ F +
Sbjct: 22 DALKYKIEKLISSKKIEDAIKLVNRAIEEYNNDEDLYFNRGKLYSIINMYDEAIEDFNKA 81
Query: 210 LRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
++ +P +AY G+ KL + E+ IE + K K++ F + A+
Sbjct: 82 IKLNPNNEKAYFNRGITKV------KLEKYEEAIE-DFNKIIKLNPKNERGYFNIGFAKA 134
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP 327
+ K+ EA++ + E++K ++ Y +G+ L K EA + F K +L +N
Sbjct: 135 SL--EKYEEAIKDFNEVIKLNTKNEEAYFFRGLAKVKLEKDKEAIEDFNKSIKLNSKNEE 192
Query: 328 YREYFVDNMVATKI 341
YF + TK+
Sbjct: 193 --AYFNRGIAKTKL 204
>gi|118387255|ref|XP_001026739.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89308506|gb|EAS06494.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1417
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/211 (23%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 127 EDVSYE-----EKEKEIEQHL-------AANPNDIEALQTLMEVRIKSQKLVEAVDVIDR 174
ED +Y EK+ +++Q L + NP+ I+A ++ V L E++ +++
Sbjct: 43 EDANYNLGFTYEKQDKLDQALECYKKVISINPSYIKAYVSIARVYFNQDNLDESIKFLEK 102
Query: 175 LIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKL 234
IE++PN E V + AI +++ + DP +++++ L + Y
Sbjct: 103 AIEIDPNYAEAYERLGWVYENQNLIDQAIDSYKKAIEIDPNHLDSHYSLGVVY------- 155
Query: 235 NEVEKRIEKAMERCKKEKKKSDLRDFKLLI--AQIKVMESKHSEALRVYEELVKEEPRDF 292
E + +I++ +E KK + D + K LI ++ + H +A++ ++++ EP++
Sbjct: 156 -ESQGKIDEGIEHYKK-MLEIDPNNIKALINLSRNYFCDLMHEDAIKCLNKVIEIEPKNK 213
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
Y G IY K DEA + ++K L P
Sbjct: 214 VAYERLGFIYENQNKIDEAIQNYQKVIELDP 244
Score = 44.7 bits (104), Expect = 0.072, Method: Composition-based stats.
Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 7/193 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E K +E+ + +PN EA + L V + +A+D + IE++PN +
Sbjct: 94 DESIKFLEKAIEIDPNYAEAYERLGWVYENQNLIDQAIDSYKKAIEIDPNHLDSHYSLGV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V G+ + I+ ++++L DP ++A L Y D + K + K +E K
Sbjct: 154 VYESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNY-FCDLMHEDAIKCLNKVIEIEPKN 212
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
K + F I ++K EA++ Y+++++ +P Y+ G +Y +EA
Sbjct: 213 KVAYERLGF------IYENQNKIDEAIQNYQKVIELDPNFQSVYISLGFMYFTKNMDEEA 266
Query: 312 EKQFEKFRRLVPR 324
+ +K ++ P+
Sbjct: 267 IECLKKGIQINPK 279
Score = 41.6 bits (96), Expect = 0.59, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +PN ++A+ L V + + L E+++ + ++++P + V +
Sbjct: 410 LELDPNYVDAINNLGIVYEEKKMLDESMECYKKALQIDPLYVKAHYNLGIVYELKKMHDQ 469
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKK-LNEVEKRIEKAMERCKKEKKKSDLRDF 260
AI+ +E + DP + AY+ L Y DKK L +KA+E + +
Sbjct: 470 AIESYERAIEIDPKYINAYNKLGNIY--LDKKILYSALNYYKKALE--IDPNYVNAYNNI 525
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
L+ K+ + EAL Y + ++ P+ + Y G++Y L +K+ A +++EK
Sbjct: 526 GLVYYDKKMFD----EALESYNKAIEINPKYNQAYYNSGLVYELKNQKETAIEKYEKAIE 581
Query: 321 LVPR 324
L P+
Sbjct: 582 LSPK 585
Score = 37.7 bits (86), Expect = 7.4, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +P DI L V + +A+ + IEL P + + + +
Sbjct: 342 LQIDPLDIYTHYNLGLVYETKKMFDKALSCYQKAIELNPKYLNAYIRSGNIYLETKKQDD 401
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
AI+ +++IL DP V+A + L + Y E +K ++++ME C K+ + D K
Sbjct: 402 AIQCYQKILELDPNYVDAINNLGIVY--------EEKKMLDESME-CYKKALQIDPLYVK 452
Query: 262 L-----LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
++ ++K M H +A+ YE ++ +P+ Y G IY
Sbjct: 453 AHYNLGIVYELKKM---HDQAIESYERAIEIDPKYINAYNKLGNIY 495
>gi|3834303|gb|AAC83019.1| F9K20.3 [Arabidopsis thaliana]
Length = 372
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 32/226 (14%)
Query: 114 STNESTKDTTSAREDVSYEEKE------KEIEQHLAANPNDIEALQ----TLMEVRIKSQ 163
++ TK+TT + +S EEK KE E L P D AL+ TL E+ S+
Sbjct: 147 GSDSPTKNTTVVKNQISEEEKATLQQRLKEFETTLNGTPQDQAALEGAAVTLTELGDYSR 206
Query: 164 KLVEAVDVIDRLIELEPNEFE-WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
A +++L + P + + ++LL ++ +Y G S AA K E++ + + +E
Sbjct: 207 ----AAAFLEKLAKERPTDPDVFRLLGEVNYELNNYEG-SIAAYKISEKVSKG--IDLEV 259
Query: 220 YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS----------DLRDFKLLIAQIKV 269
GL+ AY + KK +E K + ER +K + D +LL+ +
Sbjct: 260 TRGLMNAYLAA-KKPDEAVKFLLDTRERLNTKKTSTTDSVTDETNLDPIQVELLLGKAYS 318
Query: 270 MESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
S+A+ VY++L+ P DFR YL +GII + +AE+ F
Sbjct: 319 DWGHISDAIAVYDQLISAHPEDFRGYLAKGIILRENGSRGDAERMF 364
>gi|428219241|ref|YP_007103706.1| hypothetical protein Pse7367_3029 [Pseudanabaena sp. PCC 7367]
gi|427991023|gb|AFY71278.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudanabaena
sp. PCC 7367]
Length = 1639
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 126 REDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW 185
R+ + + ++ LA P+ +A +L V + +++L A++ R IEL+P+
Sbjct: 61 RQKGDLDAAQAAYQKALAIEPDSAKAHYSLGNVLMDAKQLAAAIESYQRAIELDPDLDSA 120
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAM 245
+ +G+ E AI +++ + +P R +AY+ L +AY GS K+ N +E+A+
Sbjct: 121 HFMLGYADQASGQLEQAIFHYQKAIDANPQRGDAYYNLGLAY-GSRKQTNLAIANLEQAV 179
Query: 246 ERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
+ + K ++ +A+ A YE+ + +P G +Y
Sbjct: 180 QLLPNDLK------IRISLAKEYKKAGNFQAAQPHYEQAIAIDPDHAETQFQLGYVYHQT 233
Query: 306 RKKDEAEKQFEKFRRLVP 323
+ D A +Q+++ L P
Sbjct: 234 NQLDAAIRQYQRAIALDP 251
>gi|417301587|ref|ZP_12088738.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula baltica
WH47]
gi|327542179|gb|EGF28672.1| Tetratricopeptide TPR_2 repeat protein [Rhodopirellula baltica
WH47]
Length = 680
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 10/207 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E E + + L PN +++ L + R L EA+ + R EL P E
Sbjct: 458 YLEAETHLRRSLEIKPNFADSVINLAQARQNLGDLEEALSLYTRATELNPGLAEAYNGLG 517
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Q G+ EA+ ++ + DP +Y G+ L + R ++A+E +K
Sbjct: 518 ATQGMMGDFEASEATLKQAIEIDPNYANSY--------GNLATLRSAQGRNKEAIELFQK 569
Query: 251 EKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + R D + + ++ + + +A++V++ ++ + P D L G+I ++ +
Sbjct: 570 AVQLAPERMDHRTNLGRVLMSAERWEDAIKVWQSVLDDSPEDVSALLNLGVIAANQQRTE 629
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNM 336
+A FE+ +VP NH Y + M
Sbjct: 630 DAIGYFERVLEIVP-NHLSATYNLGAM 655
>gi|21228903|ref|NP_634825.1| hypothetical protein MM_2801 [Methanosarcina mazei Go1]
gi|20907434|gb|AAM32497.1| hypothetical protein MM_2801 [Methanosarcina mazei Go1]
Length = 359
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN-EFEWQLLK 189
+E K IEQ L P+D + L EA+D DR IELEP+ E W K
Sbjct: 149 FENSLKFIEQVLEIVPDDFRVWYNKGVILSDMVLLKEALDAYDRAIELEPSFEIVWDN-K 207
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
V + G E A++ +E++L +DP EA+ G D+K E+A+E
Sbjct: 208 GVVLAGLGRLEEALETYEKVLLRDPKYAEAWAGKGSVLSALDRK--------EEALEAYS 259
Query: 250 KEKK-KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
K + D + + ++ +AL Y+ ++ P D + + +G++ + L K+
Sbjct: 260 SALKIRPDYPEALKAAGNLLFKLGRYEKALSTYDMALQASPEDPQLWAGRGLVLSELNKQ 319
Query: 309 DEAEKQFEKFRRLVPRNHPYREYFVD 334
+EA + + L P +P E V+
Sbjct: 320 EEALQNCNRALELKPGFNPALEIKVE 345
>gi|406951596|gb|EKD81486.1| hypothetical protein ACD_39C01785G0001, partial [uncultured
bacterium]
Length = 387
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 46/226 (20%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE-FEWQLLK 189
+E+ E +++ +A P EAL+ L ++ ++ + EA + R + L+ N+ + W LL
Sbjct: 89 FEKAEDMLKRAVAIEPMYPEALRNLGKLYLRQDRFDEATTYLRRTLALDVNQPYTWYLL- 147
Query: 190 AQVQSYAGESEAAIKGFEEILRKDP-LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERC 248
Q ++G+ +I +E +P L VEA++ L +AY +
Sbjct: 148 GMAQYFSGKITESITSYENAFSMEPNLPVEAHYNLGVAYHET------------------ 189
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
S++ EA+R YEE++K+EP G++Y++L +K
Sbjct: 190 -----------------------SRYLEAVRSYEEVLKQEPAHINALNNLGLVYSILGEK 226
Query: 309 DEAEKQFEKFRRLVPRNHPYREYFVDNMVATK--IFGEKVDRESMA 352
D A F + ++ N R + ++T+ + EK+ R +++
Sbjct: 227 DRAIDLFNQVLKIDNGNIKARINLGNVFLSTRDLVEAEKIYRSAIS 272
>gi|88703968|ref|ZP_01101683.1| TPR domain protein [Congregibacter litoralis KT71]
gi|88701795|gb|EAQ98899.1| TPR domain protein [Congregibacter litoralis KT71]
Length = 923
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++E LA +P++ A + L+E R+ +Q L A++ R +E+EP+ + + +V
Sbjct: 424 KQLEDALAGDPDNSLARERLIEARLVAQDLDGALEEASRYVEVEPDSTRALIFRGRVLLQ 483
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGL-VMAYDGSDKKLNEVEKRIEKAME 246
++AA + FEE LR+DP V A GL +A G D L + EK++E
Sbjct: 484 RQNTDAAREDFEEALRRDPASVPARGGLAAIAVLGQD--LEGAQSEFEKSLE 533
>gi|339501296|ref|YP_004699331.1| hypothetical protein Spica_2727 [Spirochaeta caldaria DSM 7334]
gi|338835645|gb|AEJ20823.1| Tetratricopeptide TPR_1 repeat-containing protein [Spirochaeta
caldaria DSM 7334]
Length = 1004
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 86/197 (43%), Gaps = 11/197 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E L +NP+D+EAL + + K + L +A+D ++R IEL+P E
Sbjct: 56 YDEALDVFHSLLGSNPDDLEALNNIAVIYRKKEDLNKALDALERAIELDPTRPELYYNLG 115
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
V +AA + +++ DP V AY+ L YD +L E EK ++
Sbjct: 116 NVYKQLSNYKAASMAYAKVIELDPRYVPAYNNLGTMYD----RLQESEKAF-AIFQKGLS 170
Query: 251 EKKKSDLRDFKLLIAQIKVMESKH--SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + + F +A +ESK EA+R YE ++ P GI+ +
Sbjct: 171 LDRNNPVLHFNYGLA----LESKGKFDEAVREYEAALRSRPGWVEALNNLGILRLKQGRH 226
Query: 309 DEAEKQFEKFRRLVPRN 325
+A + F + + P N
Sbjct: 227 SDALEIFNRILSIDPFN 243
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
++E +E E L + P +EAL L +R+K + +A+++ +R++ ++P E +
Sbjct: 192 FDEAVREYEAALRSRPGWVEALNNLGILRLKQGRHSDALEIFNRILSIDPFNAEARNNIG 251
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
V + G+ AI + + + DP V+A L A L + + + +E K
Sbjct: 252 VVFADQGKFNDAITNYRQAIEVDPKYVKAVVNLEHA-------LESIGHQGDALIELEKL 304
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
K + + ++ + + + ++ EAL ++ +P + + QG Y + K E
Sbjct: 305 VKLVPNSTEVRINLGALYLKLQRYPEALEQATRALEWDPDNLQALRIQGAAYRAIGKDAE 364
Query: 311 AEKQFEKFRRLVPRNHPY 328
A+ FE+ + P N+ +
Sbjct: 365 AQACFERILAIEPGNYSF 382
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 112 VESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
VES N + ++R + E E+ ++ +L+ N ND EAL L KS K EA+DV
Sbjct: 4 VESVNIMDRARGASRVG-DHAEAERLLKYYLSKNKNDREALLLLGSTYAKSGKYDEALDV 62
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
L+ P++ E A + + A+ E + DP R E Y+ L Y
Sbjct: 63 FHSLLGSNPDDLEALNNIAVIYRKKEDLNKALDALERAIELDPTRPELYYNLGNVY 118
>gi|86607679|ref|YP_476441.1| hypothetical protein CYB_0178 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556221|gb|ABD01178.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 274
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++ AL+ L++ +++ + A++ + +L+ELEP + + A++Q G+ E A++
Sbjct: 69 PDNPIALRGLIDTQLQLNEPQGAIEPLKKLVELEPENRQLRAFLAEIQQDTGDFEGALEQ 128
Query: 206 FEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
+ + DP + LV + + + + +EK +E+A E D +L
Sbjct: 129 LQILYEGDPKDRQVLQQLVDVQLTLGRTSEAIALLEKHLEEAPED----------NDVRL 178
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTL-----LRKKDEAEKQFEK 317
+A + ++ +A+ +Y++L+ +P DF P L + I + LR K A + FE+
Sbjct: 179 RLAFVYARNNQTEKAVVLYDKLIAADPSDFTPVLGKAIALSSATDENLRAK--APELFEQ 236
Query: 318 FRRLVP 323
RL P
Sbjct: 237 AARLAP 242
>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K E+ NP + EAL IK ++ E++ DR++E+ P ++ K
Sbjct: 1683 KAFEKAALFNPKNEEALYNAATTLIKLNRIQESLGYFDRILEISPENYDAMNYKGVAFCM 1742
Query: 196 AGESEAAIKGFEEILRKDPLRVEA-YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
+ A+K F+ +L+KDP ++A Y+ V+ + +KL E R K +
Sbjct: 1743 LEQYREALKSFDNVLKKDPNNIKAVYNVGVVCF---KQKLYETAARAFKEALTINPWHEP 1799
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
S LR L +A+ + +AL+ +E+L++ +P+D + +G++ L K EA K
Sbjct: 1800 S-LRYLGLSLAKT----GDYEDALKAFEKLLRIKPQDPQAMNYRGVLLGKLEKYGEAIKA 1854
Query: 315 FEKFRRLVP 323
F++ + P
Sbjct: 1855 FDEVLSIYP 1863
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 82/178 (46%), Gaps = 7/178 (3%)
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD 213
LME+ +L +A++ ++L P + E Q K ++ GE E A++ FE++L +
Sbjct: 626 ALMEL----GELEKALETFEKLAAKNPEDLEIQCRKGKLAMELGEHETALQAFEKVLLEK 681
Query: 214 PLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK 273
P EA++ +A ++ + V+ E + K+ D K AQ+++
Sbjct: 682 PGSREAWYRKGLALLNMERFEDAVKAFDEVIVRNTTKDPSYEDAGTLK-GFAQMQL--GN 738
Query: 274 HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREY 331
AL +E +++ P + +G+ L++++EA + FE RL P EY
Sbjct: 739 FLPALETFEGALEKNPDSGITWYYKGLTLQELQRQEEAARAFESALRLNPEFSDAFEY 796
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ + L +P+ EAL ++++K EA+D + ++LEP + K
Sbjct: 21 YEKAINTFNKILDKDPDHKEALFHRGLALLETEKTQEALDSFNDALQLEPGNSDALYRKG 80
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI---EKAME- 246
+ G E A++ +E L P E ++ + +A+ ++ E I EKA+E
Sbjct: 81 TCFAALGRFEEALEAYESALESSPDTPEIWYMMGLAF----AEMERAEASILCFEKALEL 136
Query: 247 ------RC--------KKEKKKSDLRDFK-----------------LLIAQIKVMESKHS 275
C K E+ + L DF+ L++A+I+ K+
Sbjct: 137 KPEYTAACCAMGTVAGKAERYEEALEDFERALEISPRNSEAWYAKGLILAKIE----KYE 192
Query: 276 EALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
AL ++ L++E+P+D + +I L K +EA E F + P N
Sbjct: 193 NALECFDFLIREKPKDTAALEQKCLILANLGKNEEALGALEDFLKKFPAN 242
>gi|356526348|ref|XP_003531780.1| PREDICTED: uncharacterized protein LOC100777868 [Glycine max]
Length = 393
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 112/260 (43%), Gaps = 23/260 (8%)
Query: 79 TSVTVAAAALLF-MRLPFHSIKPAIA-APVAAAATVESTNESTKDTTSAREDVSYEEKEK 136
T + V A +F + F P+ + +P +A V S S + + + + K
Sbjct: 130 TKIGVGVAVAVFGLVFAFGDFLPSGSVSPTEDSAVVNSK-------LSEEDKATLQSRLK 182
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
E E L+ +P D AL+ + + A ++D L + +PN+ + L +V+
Sbjct: 183 EFEATLSNSPRDQIALEGAAVTLAELGEYARASSLLDDLTKEKPNDADVFRLLGEVKYEL 242
Query: 197 GESEAAIKGFEEILR--KDPLRVEAYHGLVMAYDGSDKKLNEVE-----------KRIEK 243
+ E ++ ++ R KD ++ E GL + + K+ V+ + + K
Sbjct: 243 KDYEGSVAAYKSSARVSKD-IQFEVLRGLSNSLLAAKKQEEAVQLLLAYREHLSSENLSK 301
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
+ + +K D +LL+ + S+A+ VY++L+ P DFR YL +GII
Sbjct: 302 NSDSNPTDSQKLDPVQVELLLGKAYSDWGHVSDAVTVYDQLISTHPNDFRGYLAKGIILK 361
Query: 304 LLRKKDEAEKQFEKFRRLVP 323
+ +AE+ F + R P
Sbjct: 362 ENKNIGDAERMFIQARFFAP 381
>gi|428217109|ref|YP_007101574.1| hypothetical protein Pse7367_0846 [Pseudanabaena sp. PCC 7367]
gi|427988891|gb|AFY69146.1| TPR repeat-containing protein [Pseudanabaena sp. PCC 7367]
Length = 289
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 10/229 (4%)
Query: 90 FMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDI 149
F+ + + AI P A S +T++ T+ ++ YE L P +
Sbjct: 3 FLGISLAPMIGAIFTPSHDQANQNSPEATTREETTRKQIEGYE-------AVLEREPKNQ 55
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEI 209
AL+ L+E+R + A+ + L E+ P+E ++L+ A+ + +AA+ + I
Sbjct: 56 TALRGLVELRSQLGDFEGAIGPLQTLAEINPDEPGYRLILARTYMQIDKRDAAVNEYRTI 115
Query: 210 LRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQ 266
L P VEA LV + + + + ++ + A K E D ++ +
Sbjct: 116 LTTKPGNVEALSNLVELELEDERPEAAIGVLKDTLTTAETANKIEPGTVDTATVLWILGE 175
Query: 267 IKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ + ++ EAL Y+++ + +DFRP + + I L ++EA+ F
Sbjct: 176 LYRTQGRYEEALTSYDKIDTIDDQDFRPLVGRAQIQRSLGNENEAQTLF 224
>gi|302810183|ref|XP_002986783.1| hypothetical protein SELMODRAFT_446745 [Selaginella moellendorffii]
gi|300145437|gb|EFJ12113.1| hypothetical protein SELMODRAFT_446745 [Selaginella moellendorffii]
Length = 461
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 33/248 (13%)
Query: 114 STNESTKDTTSAREDVSYEEKEK----EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAV 169
STN S R EEK K + E+ L +P+D+ AL+ + + +A
Sbjct: 102 STNLDNGVVASKRLRPQEEEKFKAELQKFEEALKNSPDDLSALEGAAVSYAELGEYAKAQ 161
Query: 170 DVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILR-KDPLRVEAYHGLVMAYD 228
+++LI + P+ E L A+V+S + E + + + ++ +E GL A
Sbjct: 162 TNLEKLIRMSPSNVEALRLLAEVKSSLNDFEGSSNAYRQAIKASGSTSMELLLGLTEALI 221
Query: 229 GSDK------------------------KLNEVEKRI----EKAMERCKKEKKKSDLRDF 260
++K K + VE R E + ++ D
Sbjct: 222 DANKPGEAVDELLRAKETTKTAPGVQLLKADNVEDRTSSPAEDGTSSSSLDPVQASALDI 281
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
LL+ + ++ ++AL VY+ L+K P DFR YL +G++ + +AE+ F + R
Sbjct: 282 DLLLGKAYSAWNRPTDALTVYDALIKGRPDDFRGYLAKGVLLKEQGQASDAERMFIQARY 341
Query: 321 LVPRNHPY 328
P Y
Sbjct: 342 FAPAKAKY 349
>gi|298248115|ref|ZP_06971920.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297550774|gb|EFH84640.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 652
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 11/199 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE EQ + +P + A K ++ EA+ V ++ I+L P + LK
Sbjct: 400 EEALAAYEQAIHIDPTHVSAYFGKGMALQKLKRDEEALPVFEQAIQLNPTDANIHFLKGC 459
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCK 249
G +E A+ FE+++ +P R+ AY G+++ + L E+ +E + +
Sbjct: 460 SLEMLGRAEEALTAFEQVIHLEPTRISAYSHKGILL------RTLGRHEEALEAFEQSIR 513
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ +D K ++ + EAL +E+ ++ P+D Y +G+ L+ +
Sbjct: 514 LDPTNADAYQAK---GEVLDTLGRLEEALEAFEQSIRLNPKDASVYFSKGLTLWGLKHME 570
Query: 310 EAEKQFEKFRRLVPRNHPY 328
EA FE +L P+N +
Sbjct: 571 EALANFEYAIQLDPKNATF 589
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
EA+ ++ I L+P E K + E A+ +E+ + DP V AY G MA
Sbjct: 367 EALQAYEQAIRLDPTSAEVYGNKGLLLRRLNRMEEALAAYEQAIHIDPTHVSAYFGKGMA 426
Query: 227 YDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
K+ E E+A++ + L+ L M + EAL +E+++
Sbjct: 427 LQ-KLKRDEEALPVFEQAIQLNPTDANIHFLKGCSL------EMLGRAEEALTAFEQVIH 479
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
EP Y +GI+ L + +EA + FE+ RL P N
Sbjct: 480 LEPTRISAYSHKGILLRTLGRHEEALEAFEQSIRLDPTN 518
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 15/192 (7%)
Query: 138 IEQHLAANPND--IEALQTL-MEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
EQ + NP D I L+ +E+ +++ EA+ +++I LEP K +
Sbjct: 440 FEQAIQLNPTDANIHFLKGCSLEMLGRAE---EALTAFEQVIHLEPTRISAYSHKGILLR 496
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
G E A++ FE+ +R DP +AY D L +E+ +E + + K
Sbjct: 497 TLGRHEEALEAFEQSIRLDPTNADAYQAKGEVLD----TLGRLEEALEAFEQSIRLNPKD 552
Query: 255 SDLRDFK-LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+ + K L + +K ME EAL +E ++ +P++ Y +GI+ ++ +EA
Sbjct: 553 ASVYFSKGLTLWGLKHME----EALANFEYAIQLDPKNATFYRTKGILLRIIGHNEEALT 608
Query: 314 QFEKFRRLVPRN 325
E +L P +
Sbjct: 609 ALEYAVQLRPND 620
>gi|150388141|ref|YP_001318190.1| hypothetical protein Amet_0299 [Alkaliphilus metalliredigens QYMF]
gi|149948003|gb|ABR46531.1| TPR repeat-containing protein [Alkaliphilus metalliredigens QYMF]
Length = 220
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 92/200 (46%), Gaps = 20/200 (10%)
Query: 144 ANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAI 203
AN N ALQ IK+ +L EA +++ IEL E + + + E E A+
Sbjct: 35 ANANYKNALQL-----IKADQLAEAKGILEESIELNATEGIYHIALGNIYLREDEKETAL 89
Query: 204 KGFEEILRKDPLRVEAYH---GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDF 260
F + K P EAY+ GL M + ++ L V++ + A E + KK
Sbjct: 90 SNFVRSIEKTPKYREAYNNAVGLYMLNNQYEQALTTVQEGLAIAPEDLELTFKK------ 143
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRD-FRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
AQI ++ K+ EA+ ++ L++ + F Y G+ L K+EA+ EK+
Sbjct: 144 ----AQIYFIQDKNEEAIEGFQFLIEADSETYFEAYRFLGLSQLNLDLKEEAKMNLEKYI 199
Query: 320 RLVPRNHPYREYFVDNMVAT 339
+ P P RE ++N+++T
Sbjct: 200 EVAPEAVPVRES-IENILST 218
>gi|322419884|ref|YP_004199107.1| hypothetical protein GM18_2373 [Geobacter sp. M18]
gi|320126271|gb|ADW13831.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 263
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
F+ L Q +GE AI+ F+ + +P E Y L AY + ++++ ++
Sbjct: 5 FDENLANGIAQMESGEYSQAIEAFKGCVALEPNNAEGYFYLGEAYSEA-GQVDDAIAALK 63
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
K +E ++ D + + KH +AL Y ++ + +P+D Y+ G++Y
Sbjct: 64 KGLELAPQDV------DGLTALGDVYFESGKHKDALACYRKMTELQPKDCDGYVSMGLVY 117
Query: 303 TLLRKKDEAEKQFEKFRRLVPRN 325
+ + D+A K FE L P N
Sbjct: 118 NAMERTDDALKAFEMALELDPAN 140
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 11/177 (6%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P D++ L L +V +S K +A+ ++ EL+P + + + V + ++ A+K
Sbjct: 70 PQDVDGLTALGDVYFESGKHKDALACYRKMTELQPKDCDGYVSMGLVYNAMERTDDALKA 129
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL--L 263
FE L DP V A + + Y G L + EK I + + + + R F L L
Sbjct: 130 FEMALELDPANVFALNAMGDLYYG----LGDNEKAIAAYHKGIEIDPTDATAR-FNLGEL 184
Query: 264 IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+ +E+ E L E ++ +P YL G I + EA K FE + +
Sbjct: 185 YYDMDDLEAAERETL----EAIRLDPDFTMSYLTLGNICIDQDRTAEAIKHFENYLK 237
>gi|218438344|ref|YP_002376673.1| hypothetical protein PCC7424_1361 [Cyanothece sp. PCC 7424]
gi|218171072|gb|ACK69805.1| TPR repeat-containing protein [Cyanothece sp. PCC 7424]
Length = 1276
Score = 51.2 bits (121), Expect = 7e-04, Method: Composition-based stats.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 11/197 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE ++ L NPN EAL V K ++ EA+ D+ +EL PN E +
Sbjct: 102 YEEALSTFDKALELNPNYAEALSNRGFVLGKLERYQEALPTFDKALELNPNYAEALFNRG 161
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLVMAYDGSDKKLNEVEKRIEKAMERC 248
+ A + +++ L +P A Y G+ + G ++ E +KA+E
Sbjct: 162 VALERLERYQEAFQSYDKALELNPNNAVAWNYRGVAL---GKLERYQEALPTFDKALELN 218
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ R L V ++ EAL+ YE+ +K P + +G+ L +
Sbjct: 219 PNNAEVWFNRGVAL------VNLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLERY 272
Query: 309 DEAEKQFEKFRRLVPRN 325
EA + F+K R L P N
Sbjct: 273 QEALEAFDKARELNPNN 289
Score = 48.5 bits (114), Expect = 0.005, Method: Composition-based stats.
Identities = 44/195 (22%), Positives = 90/195 (46%), Gaps = 7/195 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE + ++ + NPN EA K ++ EA+ D+ I+L PN E +
Sbjct: 442 YEEAFQSFDKAIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQG 501
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ A++ +++ ++ +P EA++ A G+ + E + +KA++
Sbjct: 502 VALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFAL-GNLECYQEAFQSFDKAIQLNPN 560
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ + + R F L + +E ++ EAL+ Y++ ++ P +G+ L + +E
Sbjct: 561 DAEAWNNRGFSL-----RNLE-RYQEALQSYDKAIQLNPNYAEALFNRGVALERLERYEE 614
Query: 311 AEKQFEKFRRLVPRN 325
A + F+K +L P N
Sbjct: 615 AFQSFDKAIQLNPNN 629
Score = 40.4 bits (93), Expect = 1.4, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 11/198 (5%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+Y+ +EQ L PN +EA V K EA+ ++ +EL NE +
Sbjct: 33 NYQAALDALEQVLTLEPNKVEAWNGQGVVLFNLGKHQEALQSFNKALELNSNEANAWNYR 92
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMER 247
+ G+ E A+ F++ L +P EA G V+ G ++ E +KA+E
Sbjct: 93 GVALLHLGKYEEALSTFDKALELNPNYAEALSNRGFVL---GKLERYQEALPTFDKALEL 149
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+ R L + ++ EA + Y++ ++ P + + +G+ L +
Sbjct: 150 NPNYAEALFNRGVALERLE------RYQEAFQSYDKALELNPNNAVAWNYRGVALGKLER 203
Query: 308 KDEAEKQFEKFRRLVPRN 325
EA F+K L P N
Sbjct: 204 YQEALPTFDKALELNPNN 221
Score = 39.3 bits (90), Expect = 3.1, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
+IEAL +Q A+D +++++ LEPN+ E + V G+ + A++ F
Sbjct: 17 EIEALLNQGRDHFNAQNYQAALDALEQVLTLEPNKVEAWNGQGVVLFNLGKHQEALQSFN 76
Query: 208 EILRKDPLRVEA--YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA 265
+ L + A Y G+ + + G K E +KA+E + R F L
Sbjct: 77 KALELNSNEANAWNYRGVALLHLG---KYEEALSTFDKALELNPNYAEALSNRGFVLGKL 133
Query: 266 QIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ ++ EAL +++ ++ P +G+ L + EA + ++K L P N
Sbjct: 134 E------RYQEALPTFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNN 187
>gi|333993657|ref|YP_004526270.1| putative slei family protein [Treponema azotonutricium ZAS-9]
gi|333734825|gb|AEF80774.1| putative slei family protein [Treponema azotonutricium ZAS-9]
Length = 865
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 87/231 (37%), Gaps = 30/231 (12%)
Query: 122 TTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN 181
T ARE E E LA NP DIEAL + + + KL +A+ + I+LEP
Sbjct: 48 ATLARE-AKLTEAADEFTTLLAKNPQDIEALNNIAVIYRRQGKLQDALGALVEAIDLEPT 106
Query: 182 EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD---------- 231
+ E+ + G +AA + +++ DP V AY+ L YD
Sbjct: 107 KAEFHYNIGNIHKQMGNLKAASMAYAKVIELDPNYVSAYNNLGTIYDQLKEYDKAYGIFH 166
Query: 232 KKLN----------------EVEKRIEKAME--RCKKEKKKSDLRDFKLLIAQIKVMESK 273
K LN E R+E A R K L L I + +
Sbjct: 167 KGLNLDRNNPTLHFNYGVALEANGRLEDAANEYRAALRSKPGWLEPMNNL-GIIHFKQGR 225
Query: 274 HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
H +AL V+ ++ +P + G+I K EA + + + PR
Sbjct: 226 HDKALDVFNRIIDSDPSNAEARNNMGVIQADQGKNKEAVQNYRRAIEADPR 276
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E+ E L + P +E + L + K + +A+DV +R+I+ +P+ E +
Sbjct: 193 EDAANEYRAALRSKPGWLEPMNNLGIIHFKQGRHDKALDVFNRIIDSDPSNAEARNNMGV 252
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+Q+ G+++ A++ + + DP +A L ++ L E +E K
Sbjct: 253 IQADQGKNKEAVQNYRRAIEADPRYTKAVVNL-------ERTLEESGDFANAVLELEKLV 305
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
K D D + ++ + + ++ EAL + ++ P D + G + + +EA
Sbjct: 306 KLTPDSADLRDRLSGLYLKMERYPEALEQAKAALEWAPEDTQALRVLGAVQRITGNDEEA 365
Query: 312 EKQFEKFRRLVPRNHPYREYFVD 334
+ FEK + P N+ + D
Sbjct: 366 KAAFEKMLAIDPGNYSFHLDLAD 388
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + E+ LA +P + L ++ K ++ EA D I + PN+ +LL +
Sbjct: 363 EEAKAAFEKMLAIDPGNYSFHLDLADIHFKRKEYKEAEDCIMAYLARRPNDRTAKLLLGK 422
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ + G A++ FEE+ + DP EA Y K+ VEK + A +
Sbjct: 423 LYAEMGNKAHAVQVFEELSKIDPNDTEALAATAELY----KESGSVEKALRTADALVNLQ 478
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
K++ D L + E+ A+ Y VKE
Sbjct: 479 GKRATSDDLSELNKSLDFYEN----AVNTYSSSVKE 510
>gi|253995950|ref|YP_003048014.1| peptidase M48 Ste24p [Methylotenera mobilis JLW8]
gi|253982629|gb|ACT47487.1| peptidase M48 Ste24p [Methylotenera mobilis JLW8]
Length = 524
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 207 EEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD--FKLLI 264
+EI ++ ++ A G AYD + K L+E K IEKA + + + R+ F+ L+
Sbjct: 267 KEIYKQKTAKLRATQGAYKAYDDAVKALSE--KNIEKA-KSLVNQAIAGEPREARFQELL 323
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
I + E K +AL++Y + +K +P F+P++ G+ + KK EAE ++ L+P
Sbjct: 324 GDIALTEKKPQDALKLYAKAIKMQPDYFKPHIQSGVALFNMGKKAEAEPYLKRANELLP 382
>gi|365890536|ref|ZP_09429051.1| putative TPR repeat [Bradyrhizobium sp. STM 3809]
gi|365333587|emb|CCE01582.1| putative TPR repeat [Bradyrhizobium sp. STM 3809]
Length = 792
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + ++ + P + + L EV ++ + EA V+ ++ PN +L +A
Sbjct: 592 EEAKTIFKRVITQEPKNEAGYRLLAEVFVQEKSFNEAAGVLKDGLKENPNNLNLRLSQAG 651
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGL--VMAYDGSDKKLNEVEKRIEKAMERCK 249
+ G+++ AI G+E +L+ DP + A + L ++ + +DK +++ I+ A ER
Sbjct: 652 LAVSRGDNDGAISGYEAVLKDDPNALLAVNNLASLLLDERTDKA--SIDRGIQLA-ERL- 707
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEP--RDFRPYLCQGIIYTLLRK 307
K SDL F+ A ++ +EA+++ E LV P R +L QG Y L +
Sbjct: 708 ---KSSDLPQFQDTYAWAQIKRGNTAEAIKLLEGLVARVPSFSAARFHLAQG--YLALGR 762
Query: 308 KDEAEKQFEKFRRLVPRNHPYRE 330
+A +Q + P P ++
Sbjct: 763 GAQANEQLKLALGAEPDGTPLKD 785
>gi|443329566|ref|ZP_21058151.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
gi|442790904|gb|ELS00406.1| tetratricopeptide repeat protein [Xenococcus sp. PCC 7305]
Length = 449
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 7/187 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y +E Q LA+NPND++AL E + + D ++ PN+ + +A
Sbjct: 244 YRGAIEEFNQALASNPNDLDALSGRGEAYYWLKDFPAVIKDFDDVLRQNPNDSTFLWYRA 303
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
G+ AI ++E +R D Y+ ++Y KL E +K I E +
Sbjct: 304 YAHDELGKHHKAISDYDEAIRIDSDNASLYNSRGISY----SKLGEYDKAIADYNEALRL 359
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ + + + + ++ +A+ Y E+++ + + Y +G IY L
Sbjct: 360 DPNFVEAYNNR---GSSYINLGEYDKAITDYSEVIRLDSQHANAYYGRGYIYQNLGDNQR 416
Query: 311 AEKQFEK 317
A + F++
Sbjct: 417 AVQDFQQ 423
>gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
Length = 546
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E E+ IE+ L NP +++ L + I ++ EAV V+DR I L P E+ LKA
Sbjct: 338 YKEAEELIEKGLQLNPANVKLLMLKANLYIDEKRYEEAVKVLDRAISLAPREYRAYFLKA 397
Query: 191 QVQSYAG---ESEAAIKGFEEILRKDP-LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
Y G E+E +++ E+ +DP L + L+M Y + +++E E+ I KA+
Sbjct: 398 IALDYLGRTIEAEESLRKAMELNPEDPDLYNHLGYSLLMWYGSA--RVDEAEQLIRKALS 455
Query: 247 R 247
+
Sbjct: 456 K 456
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 27/222 (12%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
+ E EK L +PN+ AL+ L ++ + + ++ EA ++ +RL ++P ++++ A
Sbjct: 202 FSEAEKLYRSILKEDPNNRSALEKLAQLYMATGRIQEAKELYERLYRIDPTNYQYKHQFA 261
Query: 191 QVQSYAGESEAAIKGFEEILRKDP--LRVEAYHGLVMAYDGSDKKLNEVEKRIEK----- 243
+GE E A + E+ R P L V + L + G+ +K E+ +++ K
Sbjct: 262 VTLLQSGEFERAKEILAELYRLHPEDLNVSYSYALALELTGNPEKALEIYEKLHKLVPKN 321
Query: 244 --AMER-------CKKEKKKSDL---------RDFKLLI--AQIKVMESKHSEALRVYEE 283
+ER + K+ +L + KLL+ A + + E ++ EA++V +
Sbjct: 322 QRIIERLANTYIILGRYKEAEELIEKGLQLNPANVKLLMLKANLYIDEKRYEEAVKVLDR 381
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ PR++R Y + I L + EAE+ K L P +
Sbjct: 382 AISLAPREYRAYFLKAIALDYLGRTIEAEESLRKAMELNPED 423
>gi|386811383|ref|ZP_10098609.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386406107|dbj|GAB61490.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 609
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E E L P+ EA + K +A++ ++ I+ +P+ +E +K
Sbjct: 44 YQEAFDAYENALQIKPDAFEAWYNKAIILDYFGKYADAIESFEKAIQYKPDYYEAWYMKG 103
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGS-DKKLNEVEKRIEKAMER 247
+V +AG + A+K F++ L P V A + G V+ + GS D ++ ++ I+ +
Sbjct: 104 RVLDHAGRYDEAVKAFDKALEIKPDYVTALYNKGNVLDHIGSIDMAIDTYDRIIKIKSDA 163
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+ K L +A+I + +EAL Y++ + P+ + ++ +G + LRK
Sbjct: 164 YEAWNNKG------LALAKIP---ERRNEALDAYDKAIAINPKYYEAWINKGNCFVRLRK 214
Query: 308 KDEAEKQFEKFRRLVPRNH 326
EA +++ + P H
Sbjct: 215 YQEAVHAYDQAIEIKPSEH 233
>gi|67924549|ref|ZP_00517967.1| TPR repeat [Crocosphaera watsonii WH 8501]
gi|67853608|gb|EAM48949.1| TPR repeat [Crocosphaera watsonii WH 8501]
Length = 201
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 19/193 (9%)
Query: 84 AAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYE---EKEKEIEQ 140
AA L+ + L SI P I++ V A+ +++ + + T E + Y+ E+E
Sbjct: 14 AAFVLILLSLISFSILPLISSIVQASQGEQASLVTPETTRLENEALGYQLVLERE----- 68
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
P++ AL L+E R+ L A+ + RL +L P + ++ +L AQ Q
Sbjct: 69 -----PDNENALLGLLENRLTQGDLEAAIAPLQRLAQLNPKQPDYSILLAQSQQQLKNYP 123
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKE---KKK 254
A+ +++I+ +P + A G+V Y + S +N V+K + +A+ + E K
Sbjct: 124 EALNTYQQIIVANPGDMRALKGMVDVYLEQNRSQDAINLVQKTLNQALAQQSNESADKSV 183
Query: 255 SDLRDFKLLIAQI 267
+L +LL+ +I
Sbjct: 184 FNLTSLQLLLEEI 196
>gi|404497258|ref|YP_006721364.1| TPR domain-containing protein [Geobacter metallireducens GS-15]
gi|418065850|ref|ZP_12703220.1| Tetratricopeptide TPR_2 repeat protein [Geobacter metallireducens
RCH3]
gi|78194861|gb|ABB32628.1| TPR domain protein [Geobacter metallireducens GS-15]
gi|373561648|gb|EHP87879.1| Tetratricopeptide TPR_2 repeat protein [Geobacter metallireducens
RCH3]
Length = 267
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 7/185 (3%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
KE E+ L P+D++AL + +++ + + EA+ R++ L+P+ + + V +
Sbjct: 60 KEYEKGLKLAPDDLDALTAVGDIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVYNS 119
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
++ AIK FE+ L DP V AY+GL A+ G L+E EK I A ++ +
Sbjct: 120 LERTQKAIKAFEKALEIDPANVFAYNGLGDAWYG----LDEHEKAI-AAFQKGIELDPDD 174
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
F L ++ +H EA E V+ +P YL G +Y + +A +
Sbjct: 175 AAAHFNL--GELYYDLGEHDEAEHECLEAVRLDPAFSMSYLTLGSLYMDNERVKDAIRYL 232
Query: 316 EKFRR 320
E + R
Sbjct: 233 ELYLR 237
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 67/161 (41%), Gaps = 12/161 (7%)
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
F+ L K + AG+ A F E + ++P E Y L A + KL + K E
Sbjct: 5 FDELLAKGISLAEAGDYTGAAAQFRECVEREPDNAEGYFYLGEAL-SEEGKLQDALKEYE 63
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
K + K D D + IK ++ EAL Y+ +V +P + ++ G++Y
Sbjct: 64 KGL------KLAPDDLDALTAVGDIKFELGQYKEALAAYQRVVALDPDNSDAHVNIGLVY 117
Query: 303 TLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFG 343
L + +A K FEK + P N F N + +G
Sbjct: 118 NSLERTQKAIKAFEKALEIDPAN-----VFAYNGLGDAWYG 153
>gi|297842922|ref|XP_002889342.1| hypothetical protein ARALYDRAFT_470075 [Arabidopsis lyrata subsp.
lyrata]
gi|297335184|gb|EFH65601.1| hypothetical protein ARALYDRAFT_470075 [Arabidopsis lyrata subsp.
lyrata]
Length = 242
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 39/206 (18%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKE 137
I ++ VAA+A F RL H P I AP A +++ E K +
Sbjct: 69 IPTIAVAASAWFFFRL--HQYPPIITAP--------LDLHLDLLEEGAVKELPLESKPRY 118
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+ Q L +I+ + + +DV D + LKA+++ A
Sbjct: 119 V--------------QALHFYKIQPGTVFKLLDVFD--------SDSYDSLKARIRLSAE 156
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
E A + EE++ +DP G VM Y +L E+ + +E +++C+K+ K L
Sbjct: 157 WLETARRELEEVVERDP-------GRVMEYSQVVDELMEILRDMEVYIDKCQKDNVKGYL 209
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEE 283
R L+A+++ ME++ L+ + +
Sbjct: 210 RSCNRLLARVRRMEAQILNVLKEFHQ 235
>gi|406833340|ref|ZP_11092934.1| peptidase C14 caspase catalytic subunit p20 [Schlesneria paludicola
DSM 18645]
Length = 537
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 123/290 (42%), Gaps = 26/290 (8%)
Query: 54 PASQQNPKPSLLRTLTPLSSP-LIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATV 112
P S + P L+ P+++ LI I+ V V AA + + F + A P++ ++T
Sbjct: 226 PMSARQSTPPHLQGTRPMNNKRLIDISLVVVFLAANIGILYMFRG-RFTGAPPISPSSTF 284
Query: 113 ESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVI 172
E+ + + A E Y+ ++ + +PN EA + + + + +A+
Sbjct: 285 A---EAIQRGSDAFEKKDYDRAIVAWDEAIRIDPNHSEAHRYRGDAWMNKYEFDKALSEY 341
Query: 173 DRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLVMAYDGS 230
D I L+P L K + + GE++ AI FEE R +P + Y + A +
Sbjct: 342 DEAIRLDPQNGSPYLSKGMIWTEKGEADKAIAAFEEACRLNPRIADGRTYKRYLAAAESL 401
Query: 231 DKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRV---------- 280
+K + + +A++R K +K D + ++ HS+A R
Sbjct: 402 RRKPQ--DPKFTEAIQRGSKAFQKRDYDGAIVAWDDAIRIDPNHSKAHRYRGDASLNKRD 459
Query: 281 -------YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
Y+E ++ + ++ Y +G +T R+ D+A F++ RL P
Sbjct: 460 NEKALSEYDEAIRLDSKNAMAYCSRGAAWTEKRESDKAIADFDEAIRLDP 509
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 276 EALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREY 331
+AL Y+E ++ +P++ PYL +G+I+T + D+A FE+ RL PR R Y
Sbjct: 336 KALSEYDEAIRLDPQNGSPYLSKGMIWTEKGEADKAIAAFEEACRLNPRIADGRTY 391
>gi|452211292|ref|YP_007491406.1| hypothetical protein MmTuc01_2855 [Methanosarcina mazei Tuc01]
gi|452101194|gb|AGF98134.1| hypothetical protein MmTuc01_2855 [Methanosarcina mazei Tuc01]
Length = 422
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN-EFEWQLLK 189
+E K IEQ L P+D + L EA+D DR IELEP+ E W K
Sbjct: 212 FENSLKFIEQVLEIVPDDFRVWYNKGVILSDMVLLKEALDAYDRAIELEPSFEIVWDN-K 270
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
V + G E A++ +E++L +DP EA+ G D+K E+A+E
Sbjct: 271 GVVLAGLGRLEEALETYEKVLLRDPKYAEAWAGKGSVLSALDRK--------EEALEAYS 322
Query: 250 KEKKKSDLRDFKLLIAQIKVME-SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
K + L A + + ++ +AL Y+ ++ P D + +G++ + L K+
Sbjct: 323 SALKIRPVYPEALKAAGNLLFKLGRYEKALSTYDMALQASPEDPGLWAGRGLVLSELNKQ 382
Query: 309 DEAEKQFEKFRRLVPRNHPYREYFVD 334
+EA + + L P +P E V+
Sbjct: 383 EEALQNCNRALELRPGFNPALEIKVE 408
>gi|159044505|ref|YP_001533299.1| hypothetical protein Dshi_1957 [Dinoroseobacter shibae DFL 12]
gi|157912265|gb|ABV93698.1| hypothetical protein Dshi_1957 [Dinoroseobacter shibae DFL 12]
Length = 475
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 29/207 (14%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E E++ + A+P D A+ ++ Q+L EA ++R +E+EP L+ AQ
Sbjct: 35 DEARAELQMMIEADPQDTRAMMAFAMSLVREQRLEEAAPYVERALEVEPGNTTAALMGAQ 94
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS----------------DKKLN 235
+ G +E A + + L+ DP + A GL + + D +
Sbjct: 95 IGVRGGNAEYAEAHYHKALQADPRNMRALMGLARLHGQNQKPEAAIEVLQTALEVDPQSA 154
Query: 236 EVEKRIEKAMERCKK-EKKKSDLR----------DFKLLIAQIKVMESKHSEALRVYEEL 284
V +++ ++R +K E+ K+ LR + +A I + +EA++V E
Sbjct: 155 RVRRQLATLLQRTEKTEEAKAQLRAALTANPNDQGASVQLANICMRAGDTAEAIQVLETA 214
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEA 311
++ +P + R + G + LR +D A
Sbjct: 215 LEAQPDNRRLTMSLGRMR--LRAEDYA 239
>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 1121
Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 11/196 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE +Q LAAN +D EALQ E I + EA+ + L+ELEP E +A
Sbjct: 727 EEAVAYYDQLLAANASDPEALQGKSEALINLGRYEEAIACFNPLLELEPENIEALDGRAL 786
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ + E A++ + IL+ DP +A L E R E+A E
Sbjct: 787 ALARSERREEALEDYNRILQLDPSNTKAL--------AEKASLFEELGRYEEAAS-TYGE 837
Query: 252 KKKSDLRDFKLLIAQIKVMESK--HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ +++ Q K +E+K A+ Y++++ +P++ +G Y + +
Sbjct: 838 ILLITPENREIMYRQGKALEAKGDFEAAIACYDQILTLDPKNIDAINNKGFAYAKMERYQ 897
Query: 310 EAEKQFEKFRRLVPRN 325
EA ++K P N
Sbjct: 898 EAIASYDKAIEYAPNN 913
>gi|343127529|ref|YP_004777460.1| hypothetical protein BbiDN127_0209 [Borrelia bissettii DN127]
gi|342222217|gb|AEL18395.1| tetratricopeptide repeat family protein [Borrelia bissettii DN127]
Length = 957
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E++++I++ I+L P + E+ LKA + G + A
Sbjct: 744 AKKPNEI-AIYNLSISKFENNKLEESLEIINKAIDLNPEKSEYLYLKASINLKKGNYQNA 802
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 803 ISLYNLVIEKNPENTSAYINLAKAYEKSGNK 833
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 22/181 (12%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
++ + L NPND A +TL + + K+ D+ ++ ++P + E + + Q
Sbjct: 514 DLNEFLKNNPNDTHASKTLAQ----ANKIQYLEDLKSKVYSIKPVDLENKKTRQQ----- 564
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
AI E L+ +P A L AY+ + L + E A E+ K +
Sbjct: 565 -----AINDLNEFLKNNPNDAHASKTLAQAYENNGDLL-----KAENAYEKITKLTNTQE 614
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
+KL I + K+ K+ ++ +++ +K +P+ + + +GI +L K +A + FE
Sbjct: 615 -DHYKLGIIRFKL--KKYQNSIASFDQTIKLDPKHKKAHNNKGIALMMLNKNKKAIESFE 671
Query: 317 K 317
K
Sbjct: 672 K 672
>gi|452944222|ref|YP_007500387.1| Tetratricopeptide TPR_1 repeat-containing protein [Hydrogenobaculum
sp. HO]
gi|452882640|gb|AGG15344.1| Tetratricopeptide TPR_1 repeat-containing protein [Hydrogenobaculum
sp. HO]
Length = 548
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 35/231 (15%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE--FEWQLL 188
Y+++EK E L +P++I AL+ L + K +A D+ +L EL N +++Q
Sbjct: 205 YQDEEKLYEDILKKDPSNISALERLGNLFFKLGLSYKASDIYKKLAELNKNNPNYQYQYA 264
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDP----------LRVEAYHGLVMAYDGSDKKLNEVE 238
+ +QS E A+ + +K P L +EA H V A + KKL +++
Sbjct: 265 LSLLQS--MRYEKALSVLAPLYKKHPNNKPIAYLYGLALEAAHKPVKALEVY-KKLLQID 321
Query: 239 KRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQ 298
K+ K ER IA I + E K++EA+ E+ +K P + Y+ +
Sbjct: 322 KKKPKLYER----------------IASILIDEGKYNEAILYIEKGLKLNPLSSKLYIFK 365
Query: 299 GIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
II R A+ ++ +L P H YR YF+ M+ K+ ++D E
Sbjct: 366 AIIAASHRHYIRAKVYADQSIKLNP--HDYRSYFIRAMIEDKL--HQIDNE 412
>gi|253700327|ref|YP_003021516.1| hypothetical protein GM21_1704 [Geobacter sp. M21]
gi|251775177|gb|ACT17758.1| TPR repeat-containing protein [Geobacter sp. M21]
Length = 265
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKEK 252
+GE A++ F+ + +P E Y L AY +D + ++K +E A E
Sbjct: 18 SGEYVQAVEAFKGCISLEPENAEGYFYLGEAYSEQGKADDAIAALKKGLELAPE------ 71
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
DL D + + KH +AL Y ++ + +P+D Y+ G++Y + + DEA
Sbjct: 72 ---DL-DGITALGDVYFESGKHKDALGCYRKVTELQPKDCDGYVSMGLVYNAMERADEAL 127
Query: 313 KQFEKFRRLVPRN 325
K F+K L P+N
Sbjct: 128 KSFQKALELDPKN 140
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 14/191 (7%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+++ L P D++ + L +V +S K +A+ ++ EL+P + + + V +
Sbjct: 62 LKKGLELAPEDLDGITALGDVYFESGKHKDALGCYRKVTELQPKDCDGYVSMGLVYNAME 121
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
++ A+K F++ L DP V A + + Y G L E EK IE + + +
Sbjct: 122 RADEALKSFQKALELDPKNVFALNAMGDLYYG----LGENEKAIEAYHRGIEIDPADATA 177
Query: 258 RDFKL--LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
R F L L + +ES E L E V+ +P YL G I + EA K F
Sbjct: 178 R-FNLGELYYDMDDLESAEHETL----EAVRLDPDFTMSYLTLGNICIDEDRTQEAIKYF 232
Query: 316 EKFRRLVPRNH 326
E + + R H
Sbjct: 233 ESY---LAREH 240
>gi|308273292|emb|CBX29895.1| hypothetical protein N47_F15900 [uncultured Desulfobacterium sp.]
Length = 570
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E L P +I AL +++ K+ +A + ++++E +P E LL +
Sbjct: 101 VEDVLKKEPENIGALILFGKIKHSLNKIDDAKKIYEKIVEGKPKEKNIYLLLGSIYIDER 160
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
E + AI+ FE+++ P Y L Y G L E EK ++KA+ K K +D
Sbjct: 161 EYDKAIELFEQLVNNFPDYYLGYFYLGKIY-GEKGNLAEAEKNLKKAI----KLKPNTDE 215
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+F+L+ I + + + +++ EE+VK P + R L G+ Y KK+ K+ EK
Sbjct: 216 LNFELI--NIYKLRGEKEKTIQLLEEMVKNSPDNIRAALDLGLFY----KKNNMNKKGEK 269
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 167 EAVDVIDRLIELEPNEF--EWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV 224
+AV +++ ++L+P + +L+ +Q E+ A+ E++L+K+P + A L
Sbjct: 62 KAVIYMEKALKLDPESLFLKGELVNLYIQQ--KENNKALAIVEDVLKKEPENIGALI-LF 118
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
S K+++ +K EK +E KEK + LL+ I + E ++ +A+ ++E+L
Sbjct: 119 GKIKHSLNKIDDAKKIYEKIVEGKPKEK------NIYLLLGSIYIDEREYDKAIELFEQL 172
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
V P + Y G IY EAEK +K +L P
Sbjct: 173 VNNFPDYYLGYFYLGKIYGEKGNLAEAEKNLKKAIKLKPN 212
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 6/84 (7%)
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
+L +IK +K +A ++YE++V+ +P++ YL G IY R+ D+A E F +L
Sbjct: 116 ILFGKIKHSLNKIDDAKKIYEKIVEGKPKEKNIYLLLGSIYIDEREYDKA---IELFEQL 172
Query: 322 VPRNHPYREYFVDNMVATKIFGEK 345
V N P +Y++ KI+GEK
Sbjct: 173 V-NNFP--DYYLGYFYLGKIYGEK 193
>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2342
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 8/209 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E K++ + + +PN ++A + L V +K EA+ + IEL+P F Q
Sbjct: 264 QEAIKQLRKAIEIDPNFVQAYERLGFVFQNRKKYEEAIKNYKKAIELDPKYFNAQYNLGL 323
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ Y G+ ++ +++ + DP V+AY+ L + Y G D NE + +KA+E
Sbjct: 324 LYYYQGKYNDSLLCYKKAIELDPKYVDAYNNLGLVYFGLDMN-NEAIQYYQKALELNPDY 382
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
K + L + ++E EA+ Y++ +K P+ + + G I DE
Sbjct: 383 YKAH--YNSGLAYEKDNLIE----EAIESYKKAIKINPKFLKALIRLGDICVEREMIDEG 436
Query: 312 EKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ F+K +L P N Y + + + TK
Sbjct: 437 IECFKKIVQLSP-NSEYDFFSLGELYLTK 464
Score = 48.9 bits (115), Expect = 0.003, Method: Composition-based stats.
Identities = 52/219 (23%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE K ++ L NP I+AL L Q +A++ + IE++PN +
Sbjct: 467 YEEAIKCYKKTLEINPQYIKALNNLGLAYEYQQMFDQAIECYKKAIEIDPN-YHLAYYNC 525
Query: 191 QVQSYAGES--EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERC 248
+ SYA + + AI+ ++++L +P + A M Y S +K+ +KA+E C
Sbjct: 526 GI-SYASKKMVDEAIECYKKVLEINPQYLNASTN--MGYLYSQQKM------YDKAIE-C 575
Query: 249 KKEKKKSDLRDFKLL--IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
+ + + K+L + + H +A+ +Y+ +++ +P+ F G+ Y +
Sbjct: 576 YQSALQVNENSLKILNNLGYAYYKSNMHDQAIEIYKRVIQIDPKSFLANYNIGVAYQMKN 635
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEK 345
DEA + ++K + P+ YF + ++GEK
Sbjct: 636 MFDEAIEFYKKVEEIFPK------YFTVFIRLGNVYGEK 668
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 7/186 (3%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
++Q + +PN ++A Q L + K KL + + ++IE+EP E A G
Sbjct: 100 LKQAIEIDPNFVQAYQKLAQAYKKQNKLDQITECYKKIIEIEPKNMEAFHELALTYEIKG 159
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+ + A +++IL DP ++AY L Y D E + ++ A+E + +
Sbjct: 160 QIDEAYAWYKKILTIDPQFIKAYISLARNY-FCDSMTEEAIRMLKTALEIDPNSAEAHER 218
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
F I +S AL Y+ +++ P Y+ IY L + EA KQ K
Sbjct: 219 LGF------IYEKQSMFDSALISYKIALEKNPNFLSVYISLAYIYFLKQLDQEAIKQLRK 272
Query: 318 FRRLVP 323
+ P
Sbjct: 273 AIEIDP 278
Score = 42.4 bits (98), Expect = 0.38, Method: Composition-based stats.
Identities = 43/222 (19%), Positives = 98/222 (44%), Gaps = 11/222 (4%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
S EK ++ Q + NP ++ L + Q +A+D + ++IE++P FE
Sbjct: 873 SKNEKLEQYLQEIIKNPESAKSYFELGQFYQSQQNNKKAIDCLKKVIEIDPKYFEAYEKL 932
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
A + + +I+ +++ +P +A ++ Y D+K+ K M
Sbjct: 933 AFIFKEKKMFDLSIENYQKAFELNPKFTDAIKKIMRIY--LDRKMVSEAKEFHNKM---- 986
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
E+ ++ F L + SK+ +A+ Y+++++ +P+ ++ G IY ++
Sbjct: 987 LEENPNNAEIFYQLGEAYQEDSSKYEDAIACYKKVIQIDPKHIDSHIELGCIYLDKKEYQ 1046
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRESM 351
+A + F K L P +E N + + +K++ +++
Sbjct: 1047 QAIEYFNKVIELDP-----KEVVALNNIGLAYYDQKMNEKAL 1083
Score = 40.8 bits (94), Expect = 0.89, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 47/87 (54%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L+ NPN ++A + ++ +K + EA+ + + IE++PN + AQ + +
Sbjct: 70 LSINPNYLKAYASKADIHLKKSNIDEAIISLKQAIEIDPNFVQAYQKLAQAYKKQNKLDQ 129
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYD 228
+ +++I+ +P +EA+H L + Y+
Sbjct: 130 ITECYKKIIEIEPKNMEAFHELALTYE 156
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 128 DVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL 187
D EE + ++ L +PN EA + L + K A+ +E PN +
Sbjct: 192 DSMTEEAIRMLKTALEIDPNSAEAHERLGFIYEKQSMFDSALISYKIALEKNPNFLSVYI 251
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMER 247
A + + AIK + + DP V+AY L + + KK E K +KA+E
Sbjct: 252 SLAYIYFLKQLDQEAIKQLRKAIEIDPNFVQAYERLGFVFQ-NRKKYEEAIKNYKKAIE- 309
Query: 248 CKKEKKKSDLRDFKLLIAQIKV-----MESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
D K AQ + + K++++L Y++ ++ +P+ Y G++Y
Sbjct: 310 ----------LDPKYFNAQYNLGLLYYYQGKYNDSLLCYKKAIELDPKYVDAYNNLGLVY 359
Query: 303 TLLRKKDEAEKQFEKFRRLVP 323
L +EA + ++K L P
Sbjct: 360 FGLDMNNEAIQYYQKALELNP 380
Score = 38.5 bits (88), Expect = 5.2, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 128 DVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE--W 185
D+S E +K E NP +A++ +M + + + + EA + ++++E PN E +
Sbjct: 943 DLSIENYQKAFE----LNPKFTDAIKKIMRIYLDRKMVSEAKEFHNKMLEENPNNAEIFY 998
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE--- 242
QL +A Q + + E AI ++++++ DP ++++ L Y DKK E ++ IE
Sbjct: 999 QLGEA-YQEDSSKYEDAIACYKKVIQIDPKHIDSHIELGCIY--LDKK--EYQQAIEYFN 1053
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
K +E KE L + L K+ E +AL Y + ++ P + G++Y
Sbjct: 1054 KVIELDPKEVVA--LNNIGLAYYDQKMNE----KALEYYNKALEINPTFQQSIYNTGLVY 1107
Query: 303 TLLRKKDEAEKQFEKFRRLVP 323
+ + ++A + + K ++ P
Sbjct: 1108 EIQNQYEKALEYYNKVLKINP 1128
>gi|242043690|ref|XP_002459716.1| hypothetical protein SORBIDRAFT_02g009290 [Sorghum bicolor]
gi|241923093|gb|EER96237.1| hypothetical protein SORBIDRAFT_02g009290 [Sorghum bicolor]
Length = 415
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 120/279 (43%), Gaps = 55/279 (19%)
Query: 79 TSVTVAAAALLFMR-------LPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSY 131
T V + A ++F LP+ S+ P +K++ ++ +S
Sbjct: 145 TKVGIGVAVVVFGLVFAFGDFLPYGSVSP------------------SKESAVVKQKLSQ 186
Query: 132 EEKEK------EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE- 184
EE+EK + L+ +PND AL+ ++ + +A +++LI++ P++ E
Sbjct: 187 EEEEKFKNALQGFQATLSKSPNDPTALEGAAVSLVELGEYEKASTFLEKLIKVIPDKAEA 246
Query: 185 WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK--------- 232
++LL K +++ Y G S + + D + E GL + + K
Sbjct: 247 YRLLGEVKFELKDYEGSSSSYRS---ALSSSDNIDFEVLRGLTNSLLAAKKPDQAVDIIL 303
Query: 233 ----KLNEVEKR----IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
KLNE + +E A + +++ + D LL+ + S+A+ VY+ L
Sbjct: 304 LCRQKLNEKSQTGLVDLEAANDNDRQKPQDIDPIQVDLLLGKAYSDWGHISDAISVYDTL 363
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ E P DFR YL +GII K +AE+ F + + P
Sbjct: 364 ITEHPEDFRGYLAKGIILKENGKAGDAERMFIQAKFFAP 402
>gi|154150715|ref|YP_001404333.1| hypothetical protein Mboo_1172 [Methanoregula boonei 6A8]
gi|153999267|gb|ABS55690.1| TPR repeat-containing protein [Methanoregula boonei 6A8]
Length = 4079
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP-------- 214
QK EA+ DR + L+ N + K Q ++ G+ E A+ F+ ++ DP
Sbjct: 2026 QKYSEAIASFDRALALDANHIGALVKKGQSRANLGQYEEAVTLFDRVITLDPENVIAHFV 2085
Query: 215 -----LRVEAYHGLVMA------YDGSDKKLNEVE-------KRIEKAMERCKKEKKKSD 256
R+ Y V+A YDG++ ++ + R +++ E K +K+
Sbjct: 2086 MGTALARLARYEDAVVALDRALEYDGNNARIYACKGYSLYRLGRFKESAESFAKAQKREP 2145
Query: 257 LRDFKLLIAQIKVM-ESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
F L ++ K E + ++++L+ EP+ + +GI Y+ L DEA++ F
Sbjct: 2146 KDPFSLRFRGKSLLHNGKWEEGIAIFDKLLGIEPKSADAWYYKGIAYSHLSLHDEAQESF 2205
Query: 316 EK 317
E+
Sbjct: 2206 EQ 2207
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 17/192 (8%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
+Q L+ANP EA+ I Q A+ DR +E+ P+ F+ KA+ G
Sbjct: 3770 DQALSANPGYAEAIFQKGRTYITLQNPDGAIRSFDRALEVNPSCFQAHYWKARTLYDEGS 3829
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK-----EKK 253
+AAI ++ + P R E Y +AY D + E K +KA+E K
Sbjct: 3830 YDAAITEYDRAIAIKPDRPELYRDRGLAYAAID-QYREAIKSYDKALELDTHGADAFSHK 3888
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
S L + + + +AL +E+ ++++P + +G + L K EA
Sbjct: 3889 GSSLAELGM-----------YRDALEAFEKAIEKDPELATSWFGKGNVLYDLGKFTEACA 3937
Query: 314 QFEKFRRLVPRN 325
+++ R P N
Sbjct: 3938 AYDEGLRRDPEN 3949
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 33/216 (15%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
LA +P ++ AL +K +A+ V D + ++ +E K QS +
Sbjct: 2719 LALDPANVPALFNKGLALANLKKFADAITVFDAALRIDAKHYEAWFAKGYAQSRLRHYDD 2778
Query: 202 AIKGFEEILRKDPLRVEAYH--GLVMAYDG---------------SDKK----------- 233
A+ F+ L DP R ++ G+ +A G DKK
Sbjct: 2779 AVGAFDHALAIDPGRYAVWYEKGVALARAGKNDEAVAAFSEAIARDDKKPEAQYEKGRAL 2838
Query: 234 --LNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRD 291
L E E+ + + D + L +A +V K ++A+ Y+ +V P
Sbjct: 2839 LELGEDEQAVTSFTRALDLDTSFGDAA-YYLGLALERV--GKFTDAITAYDRMVAARPDH 2895
Query: 292 FRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP 327
+ +GI L + ++A + +EK R++ P N P
Sbjct: 2896 SDAWYHRGIASERLGRDNDAVQAYEKARQIEPHNLP 2931
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
++E + + LAANP+ +EAL E + Q+ +AV+ DR++ L PN + K
Sbjct: 940 HDEAVAALNRSLAANPSQMEALVCRGESLMVLQRYADAVETFDRILSLNPNVISAWMQKG 999
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ + A+ + +L +P +A+
Sbjct: 1000 AALERLVKKQDALAVYTRVLEINPGNADAW 1029
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 89/225 (39%), Gaps = 33/225 (14%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
+++ + Q + +P I+A K +A+ DR+I L P + + K
Sbjct: 634 WKDAAEAFGQAVEQDPGLIDAWLAFGTCNANLGKFPDAIAAFDRVIALSPKNTQAFIHKG 693
Query: 191 QVQSYAGESEAAIKGFEEILRKDPL--RVEAYHGLVMAYDGSDKKLNEVEKRIEKAME-- 246
G+ E AI L P R Y G+ +A + ++ E + E+ +E
Sbjct: 694 IALVTTGKFEEAIAALNRALEDAPRDERAWYYKGMSLA---ALQRFEEAVRSFERVLEIN 750
Query: 247 -RC-----KKEKKKSDL-RDFKLLIAQIKVME-------------------SKHSEALRV 280
RC +K + L + + +I+ + +E ++ +A++
Sbjct: 751 RRCSPAFFQKGNALAHLGKQLEAIISYDQALEIDPDNPVTLYQKGIALAQRERYDDAIKT 810
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+E L+ EP + + GI Y ++ DEA FE+ + P+N
Sbjct: 811 FERLLTLEPENAQALYYLGIAYAGRQRFDEAIVAFERSLEIDPKN 855
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 7/180 (3%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+PND A L K KL EA+ + I+L PN E S G+ + AI
Sbjct: 229 DPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIA 288
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
+++ ++ +P +AY+G L++ KR E K + + +
Sbjct: 289 AYQKAIQLNP-------NFALAYNGLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNGL 341
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+ K EA+ Y++ ++ +P D Y G+ K+DEA ++K +L P
Sbjct: 342 GNALSDQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQLNPN 401
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 9/181 (4%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NPND +A L KL EA+ + I+L PN + S G+ E AI
Sbjct: 93 NPNDADAYNNLGNALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNALSDQGKLEEAIA 152
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDK-KLNEVEKRIEKAMERCKKEKKKSDLRDFKLL 263
+++ ++ +P +AY+ L +A SD+ KL E +KA++ + L
Sbjct: 153 AYQKAIQLNPNFTQAYYNLGIAL--SDQGKLEEAIAAYQKAIQLNPNYADAY----YNLG 206
Query: 264 IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+A + K EA+ Y++ ++ +P D Y G K +EA ++K +L P
Sbjct: 207 VALFD--QGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264
Query: 324 R 324
Sbjct: 265 N 265
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E E + + +PN +A L KL EA+ + I+L PN+ +
Sbjct: 45 YTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAYNNLG 104
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK-KLNEVEKRIEKAMERCK 249
Y G+ E AI +++ ++ +P +AY+ L A SD+ KL E +KA++
Sbjct: 105 NALYYQGKLEEAIAAYQKAIQLNPNFAQAYNNLGNAL--SDQGKLEEAIAAYQKAIQLNP 162
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + L IA + K EA+ Y++ ++ P Y G+ K D
Sbjct: 163 NFTQAY----YNLGIALSD--QGKLEEAIAAYQKAIQLNPNYADAYYNLGVALFDQGKLD 216
Query: 310 EAEKQFEKFRRLVPRN 325
EA ++K +L P +
Sbjct: 217 EAIAAYQKAIQLDPND 232
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
K K EA + R+IEL+PN + Y G+ + AI +++ ++ +P +AY
Sbjct: 41 KMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAY 100
Query: 221 HGL--VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+ L + Y G KL E +KA++ + + + + K EA+
Sbjct: 101 NNLGNALYYQG---KLEEAIAAYQKAIQLNPNFAQAYN------NLGNALSDQGKLEEAI 151
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
Y++ ++ P + Y GI + K +EA ++K +L P
Sbjct: 152 AAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 197
>gi|410678968|ref|YP_006931370.1| surface-located membrane protein 1 [Borrelia afzelii HLJ01]
gi|408536356|gb|AFU74487.1| surface-located membrane protein 1 [Borrelia afzelii HLJ01]
Length = 261
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+I A+ L + ++ KL E++++I++ I L P + E+ LKA + G + AI
Sbjct: 51 PNEI-AIYNLSIAKFENNKLEESLEIINKAINLNPEKSEYLYLKASINLKNGNYQNAIPL 109
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ ++ K+P + AY L AY+ S K
Sbjct: 110 YNLVIEKNPENISAYINLAKAYEKSGNK 137
>gi|328952032|ref|YP_004369366.1| hypothetical protein Desac_0294 [Desulfobacca acetoxidans DSM
11109]
gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 599
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 91/190 (47%), Gaps = 8/190 (4%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E+ ++ +PN +EA Q L + +L EA +++I L+P E + A + + G
Sbjct: 126 LEKAISLDPNHLEAHQLLAGLHTGMNQLREATTEYEKIITLDPANEEAVIFLATLHAQQG 185
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
A+ + +++K+P + A L Y +L +K ++A+ K+ +
Sbjct: 186 NCAKAVNLLKNLIKKNPDQFIALFYLGKCYI-ELGQLTAAKKEFQQALH------KQPEF 238
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
L + + +E ++S+A +Y +++ +P + R + G +Y L + EA + F +
Sbjct: 239 LPAMLELGFVYELEKRYSQAKTMYRRILRHDPDNQRAWASLGRLYLLNDQYTEALQAFGE 298
Query: 318 FRRLVPRNHP 327
+R + +N P
Sbjct: 299 IKR-ISKNEP 307
>gi|445062480|ref|ZP_21374862.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
gi|444506126|gb|ELV06506.1| hypothetical protein H263_03666 [Brachyspira hampsonii 30599]
Length = 365
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 10/174 (5%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
K +K EA+ D+ IEL+PN + ++ V+ A ++E AIK F + + +P AY
Sbjct: 21 KEEKYEEAIKYFDKAIELQPNNTNYYNMRGIVKIDAEDNEGAIKDFTKCIELNPKHRIAY 80
Query: 221 HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRV 280
+ + +A L E E+ I K + C + K+D A+ ++ E + EA+
Sbjct: 81 NNIGVA----KYNLEEYEEAI-KDYDICIERLPKADYVYCNRGDAKCQLGE--YEEAIED 133
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
Y ++ +P++ Y +G+ L+K +EA K F+K L P++ PY Y+ D
Sbjct: 134 YSRSIELKPKNADYYYFRGLAKNKLKKYEEAIKDFDKSIELKPKD-PY--YYSD 184
>gi|13324602|gb|AAK18804.1|AF305612_1 LMP1 [Borrelia burgdorferi]
Length = 1013
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+I A+ L + ++ KL E++++I++ I L P + E+ LKA + G + AI
Sbjct: 803 PNEI-AIYNLSIAKFENNKLEESLEIINKAINLNPEKSEYLYLKASINLKNGNYQNAIPL 861
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ ++ K+P + AY L AY+ S K
Sbjct: 862 YNLVIEKNPENISAYINLAKAYEKSGNK 889
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ + D+ ++ ++P + E + Q
Sbjct: 569 KDLNEFLITNPNDAYASKTLAQ----ANKIQQLEDLKSKVYSIKPGDLENPKTRQQ---- 620
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAY--DGSDKKLNEVEKRIEKAMERCKKEKK 253
AIK E L +P A L AY DG K V +I K + K++
Sbjct: 621 ------AIKDLNEFLITNPNDAYASKTLAQAYENDGDLLKAESVYDKITK-LTNAKEDY- 672
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+KL I + K+ + +HS + + + ++ +P+ + + +GI LL K +A +
Sbjct: 673 ------YKLGIIRFKLKKYEHS--IEAFNQTIRLDPKHKKAHNNKGIALILLNKNKQAIE 724
Query: 314 QFEK 317
FEK
Sbjct: 725 SFEK 728
>gi|348538308|ref|XP_003456634.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Oreochromis niloticus]
Length = 846
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I+ ++ L I++Q +A+ +R ++P + +WQL+ A +G S+ A++
Sbjct: 616 PSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNSQKALET 675
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D +L EV+ K++EK M+ ++++ KS
Sbjct: 676 YKEIHRKFPENVECLRFLVRL--CTDMQLKEVQDYATKLKKVEK-MKEIREQRIKS 728
>gi|348538306|ref|XP_003456633.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Oreochromis niloticus]
Length = 824
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I+ ++ L I++Q +A+ +R ++P + +WQL+ A +G S+ A++
Sbjct: 616 PSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNSQKALET 675
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D +L EV+ K++EK M+ ++++ KS
Sbjct: 676 YKEIHRKFPENVECLRFLVRL--CTDMQLKEVQDYATKLKKVEK-MKEIREQRIKS 728
>gi|216264005|ref|ZP_03435999.1| tetratricopeptide repeat domain protein [Borrelia afzelii ACA-1]
gi|215980049|gb|EEC20871.1| tetratricopeptide repeat domain protein [Borrelia afzelii ACA-1]
Length = 1013
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+I A+ L + ++ KL E++++I++ I L P + E+ LKA + G + AI
Sbjct: 803 PNEI-AIYNLSIAKFENNKLEESLEIINKAINLNPEKSEYLYLKASINLKNGNYQNAIPL 861
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ ++ K+P + AY L AY+ S K
Sbjct: 862 YNLVIEKNPENISAYINLAKAYEKSGNK 889
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 26/184 (14%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ + D+ ++ ++P + E + Q
Sbjct: 569 KDLNEFLITNPNDAYASKTLAQ----ANKIQQLEDLKSKVYSIKPGDLENPKTRQQ---- 620
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAY--DGSDKKLNEVEKRIEKAMERCKKEKK 253
AIK E L +P A L AY DG K V +I K + K++
Sbjct: 621 ------AIKDLNEFLITNPNDAYASKTLAQAYENDGDLLKAESVYDKITK-LTNAKEDY- 672
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+KL I + K+ + +HS + +++ ++ +P+ + + +GI LL K +A +
Sbjct: 673 ------YKLGIIRFKLKKYEHS--IEAFDQTIRLDPKHKKAHNNKGIALILLNKNKQAIE 724
Query: 314 QFEK 317
FEK
Sbjct: 725 SFEK 728
>gi|218246150|ref|YP_002371521.1| hypothetical protein PCC8801_1300 [Cyanothece sp. PCC 8801]
gi|218166628|gb|ACK65365.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 878
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 13/183 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+PND A L K KL EA+ + I+L PN E S G+ + AI
Sbjct: 229 DPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIA 288
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
+++ ++ +P EAY+ L +A K+ +E +KA++ +F L
Sbjct: 289 AYQKAIQLNPNLAEAYNNLGVALSDQGKR-DEAIAAYQKAIQLNP---------NFALAY 338
Query: 265 AQIKVM---ESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
+ V + K EA+ Y++ ++ P Y G+ + K+DEA ++K +L
Sbjct: 339 NNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQL 398
Query: 322 VPR 324
P
Sbjct: 399 NPN 401
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 9/181 (4%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NPND +A L KL EA+ + I+L PN + S G+ E AI
Sbjct: 93 NPNDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIA 152
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDK-KLNEVEKRIEKAMERCKKEKKKSDLRDFKLL 263
+++ ++ +P +AY+ L +A SD+ KL E +KA++ + D
Sbjct: 153 AYQKAIQLNPNFTQAYYNLGIAL--SDQGKLEEAIAAYQKAIQL------NPNYADAYYN 204
Query: 264 IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ + K EA+ Y++ ++ +P D Y G K +EA ++K +L P
Sbjct: 205 LGNALFDQGKLDEAIAAYQKAIQLDPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNP 264
Query: 324 R 324
Sbjct: 265 N 265
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 15/184 (8%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN-EFEWQLLKAQVQSYAGESEAAI 203
NPN EA L K EA+ + I+L PN + L + S G+ + AI
Sbjct: 297 NPNLAEAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVAL-SDQGKRDEAI 355
Query: 204 KGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLL 263
+++ ++ +P AY+ L +A K+ +E +KA++ +F L
Sbjct: 356 AAYQKAIQLNPNFALAYNNLGVALSDQGKR-DEAIAAYQKAIQLNP---------NFALA 405
Query: 264 IAQIKVM---ESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+ V + K EA+ Y++ ++ +P D Y G+ K+DEA ++K +
Sbjct: 406 YNNLGVALRNQGKRDEAIAAYQKAIQLDPNDANAYNNLGLALRNQGKRDEAITAYQKAIQ 465
Query: 321 LVPR 324
L P
Sbjct: 466 LNPN 469
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E E + + +PN +A L KL EA+ + I+L PN+ +
Sbjct: 45 YTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAYNNLG 104
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK-KLNEVEKRIEKAMERCK 249
S G+ E AI +++ ++ +P +AY+ L +A SD+ KL E +KA++
Sbjct: 105 NALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIAL--SDQGKLEEAIAAYQKAIQLNP 162
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + L IA + K EA+ Y++ ++ P Y G K D
Sbjct: 163 NFTQAY----YNLGIALSD--QGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLD 216
Query: 310 EAEKQFEKFRRLVPRN 325
EA ++K +L P +
Sbjct: 217 EAIAAYQKAIQLDPND 232
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
K K EA + R+IEL+PN + Y G+ + AI +++ ++ +P +AY
Sbjct: 41 KMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAY 100
Query: 221 HGLVMAYDGSDK-KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALR 279
+ L A SD+ KL E +KA++ + L IA + K EA+
Sbjct: 101 NNLGNAL--SDQGKLEEAIAAYQKAIQLNPNYADAY----YNLGIALSD--QGKLEEAIA 152
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
Y++ ++ P + Y GI + K +EA ++K +L P
Sbjct: 153 AYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPN 197
>gi|225549799|ref|ZP_03770763.1| FF domain protein [Borrelia burgdorferi 118a]
gi|225369607|gb|EEG99056.1| FF domain protein [Borrelia burgdorferi 118a]
Length = 1119
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + G + A
Sbjct: 906 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNA 964
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 965 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 995
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ ++ ++ ++P + E + Q
Sbjct: 675 KDLNEFLKNNPNDAQASKTLAQ----AYKIQHLENLKSKVHSIKPIDLENTKSRQQ---- 726
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 727 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 775
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 776 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 832
Query: 316 EK 317
EK
Sbjct: 833 EK 834
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 23/191 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL---EPNEFEWQLLKAQV 192
K++ + L NPND +A +TL + + L++A + +++I+L + + ++ +++ ++
Sbjct: 729 KDLNEFLKNNPNDAQASKTLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKL 788
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ Y E +I+ F++ ++ DP +A H G+ + +KK E EKA++ K
Sbjct: 789 KKY----EHSIESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIE---SFEKAIQIDK- 840
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY--LCQGIIYTLLRKK 308
++ Q + E K+ + + +E D +P L GI+ L
Sbjct: 841 --------NYSTAYYQKGIAEEKNGDMQQAFESFKNAYNLDKKPNYALKAGIVSNNLGNF 892
Query: 309 DEAEKQFEKFR 319
++EK F
Sbjct: 893 KQSEKYLNFFN 903
>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 762
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD 213
L+++ ++ +L EA D I + +LEPNEF W +L A +S G+ E E++L
Sbjct: 525 CLIDMFVRLGRLDEAFDFIKEM-DLEPNEFIWSILIAGCRS-QGKLELGFYAAEQLLNLK 582
Query: 214 PLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK 273
P E Y+ L+ Y S K EV R+ K M KE+K L+D+ + + K+ K
Sbjct: 583 PKDTETYNLLLNMYL-SAGKWKEVS-RVRKMM----KEEKLGRLKDWSWISIKDKIYSFK 636
Query: 274 -----HSEALRVYEEL--VKEEPRDF 292
H+++ +YE L + E+ + F
Sbjct: 637 RNARSHAQSGEMYELLGNLHEKAKSF 662
>gi|221217537|ref|ZP_03589007.1| surface-located membrane protein 1 [Borrelia burgdorferi 72a]
gi|13324584|gb|AAK18795.1|AF305603_1 LMP1 [Borrelia burgdorferi]
gi|221192600|gb|EEE18817.1| surface-located membrane protein 1 [Borrelia burgdorferi 72a]
Length = 1011
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + G + A
Sbjct: 798 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNA 856
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 857 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 887
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ ++ ++ ++P + E + Q
Sbjct: 567 KDLNEFLKNNPNDAQASKTLAQ----AYKIQHLENLKSKVHSIKPIDLENTKSRQQ---- 618
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 619 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 667
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 668 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 724
Query: 316 EK 317
EK
Sbjct: 725 EK 726
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 23/191 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL---EPNEFEWQLLKAQV 192
K++ + L NPND +A +TL + + L++A + +++I+L + + ++ +++ ++
Sbjct: 621 KDLNEFLKNNPNDAQASKTLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKL 680
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ Y E +I+ F++ ++ DP +A H G+ + +KK E EKA++ K
Sbjct: 681 KKY----EHSIESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIE---SFEKAIQIDK- 732
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY--LCQGIIYTLLRKK 308
++ Q + E K+ + + +E D +P L GI+ L
Sbjct: 733 --------NYSTAYYQKGIAEEKNGDMQQAFESFKNAYNLDKKPNYALKAGIVSNNLGNF 784
Query: 309 DEAEKQFEKFR 319
++EK F
Sbjct: 785 KQSEKYLNFFN 795
>gi|302142104|emb|CBI19307.3| unnamed protein product [Vitis vinifera]
Length = 683
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 15/146 (10%)
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD 213
L+++ ++ +L EA D I + +LEPNEF W +L A +S G+ E E++L
Sbjct: 446 CLIDMFVRLGRLDEAFDFIKEM-DLEPNEFIWSILIAGCRS-QGKLELGFYAAEQLLNLK 503
Query: 214 PLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK 273
P E Y+ L+ Y S K EV R+ K M KE+K L+D+ + + K+ K
Sbjct: 504 PKDTETYNLLLNMYL-SAGKWKEVS-RVRKMM----KEEKLGRLKDWSWISIKDKIYSFK 557
Query: 274 -----HSEALRVYEEL--VKEEPRDF 292
H+++ +YE L + E+ + F
Sbjct: 558 RNARSHAQSGEMYELLGNLHEKAKSF 583
>gi|224534083|ref|ZP_03674666.1| hypothetical protein BBUCA112A_0219 [Borrelia burgdorferi CA-11.2a]
gi|224512782|gb|EEF83150.1| hypothetical protein BBUCA112A_0219 [Borrelia burgdorferi CA-11.2a]
Length = 1065
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + G + A
Sbjct: 852 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKGNYQNA 910
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 911 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 941
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ ++ ++ ++P + E + Q
Sbjct: 621 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLENLKSKVHSIKPIDLENTKSRQQ---- 672
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 673 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 721
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 722 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 778
Query: 316 EK 317
EK
Sbjct: 779 EK 780
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 89/191 (46%), Gaps = 23/191 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL---EPNEFEWQLLKAQV 192
K++ + L NPND +A +TL + + L++A + +++I+L + + ++ +++ ++
Sbjct: 675 KDLNEFLKNNPNDAQASKTLAQAYENNGDLLKAENAYEKIIKLTNTQEDHYKLGIIRFKL 734
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ Y E +I+ F++ ++ DP +A H G+ + +KK E EKA++ K
Sbjct: 735 KKY----EHSIESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIE---SFEKAIQIDK- 786
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY--LCQGIIYTLLRKK 308
++ Q + E K+ + + +E D +P L GI+ L
Sbjct: 787 --------NYSTAYYQKGIAEEKNGDMQQAFESFKNAYNLDKKPNYALKAGIVSNNLGNF 838
Query: 309 DEAEKQFEKFR 319
++EK F
Sbjct: 839 KQSEKYLNFFN 849
>gi|386813211|ref|ZP_10100435.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386814261|ref|ZP_10101485.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386402708|dbj|GAB63316.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403758|dbj|GAB64366.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 254
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 7/200 (3%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ 186
ED S + + +Q + NPN EA L V + + EA++ + +E++PN +
Sbjct: 26 EDASLDAAMRSFQQAIEINPNSAEAHYNLGIVYHEKGMMEEAINEYKKTLEIDPNFVKAY 85
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
V AG + A+ ++ + P VEAY+ L +AY K+ N+ EKA+E
Sbjct: 86 NNLGVVYHNAGRLDEAVGSLKKAVELSPQYVEAYYNLGIAY-YKKKQYNDAAGAFEKAVE 144
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
K + ++ + + ++ EA+ +++ + P+ Y G+ Y
Sbjct: 145 FNPAFDKG--YYNLGIVYSSMDNLD----EAIDAFKKATEINPKYSNAYYNLGVTYAKKD 198
Query: 307 KKDEAEKQFEKFRRLVPRNH 326
D+A + +K L P N+
Sbjct: 199 HYDDAIQSLQKALELNPNNY 218
>gi|289163725|ref|YP_003453863.1| hypothetical protein LLO_0381 [Legionella longbeachae NSW150]
gi|288856898|emb|CBJ10712.1| TPR repeat protein, weakly similar to eukaryotic proteins
[Legionella longbeachae NSW150]
Length = 1060
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y + K EQ + NP D Q + + ++ A++ I++ IE+EPN + +KA
Sbjct: 402 YPDAFKVYEQAILLNPKDAMLYQEMAQTYATAKDPQNAMNAINKAIEIEPNRISFLEIKA 461
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI--------- 241
+ ++ +S+ A + +++IL P EA GL K L VE+ +
Sbjct: 462 KYANWLKDSKLAKETYQKILTLSPGNKEAIAGLKALVHLEKKTLGPVEQLVADANNYASL 521
Query: 242 ------EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
E A+++ K K K D R FK+L ++I M +K AL + + +P +
Sbjct: 522 RQYNQAEDAVKKAIKMKPK-DPRLFKML-SEIYAMANKPQLALTAINQALALDPTNLDYL 579
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+G + K + E+ + K L P +
Sbjct: 580 RAKGKVAAWAGDKYQMEESYAKILLLKPHDQ 610
>gi|302772172|ref|XP_002969504.1| hypothetical protein SELMODRAFT_410232 [Selaginella moellendorffii]
gi|300162980|gb|EFJ29592.1| hypothetical protein SELMODRAFT_410232 [Selaginella moellendorffii]
Length = 354
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 99/229 (43%), Gaps = 26/229 (11%)
Query: 126 REDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW 185
+E+ ++ + ++ E+ L +P+D+ AL+ + + +A +++LI + P+ E
Sbjct: 118 QEEEKFKAELQKFEEALKNSPDDLSALEGAAVSYAELGEYAKAQTNLEKLIRMSPSNVEA 177
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILR-KDPLRVEAYHGLVMAYDGSDK------------ 232
L A+V+S + E + + + ++ +E GL A ++K
Sbjct: 178 LRLLAEVKSSLNDFEGSSNAYRQAIKASGSTSMELLLGLTEALIDANKPGEAVDELLRAK 237
Query: 233 ------------KLNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALR 279
K ++VE +I + S D LL+ + ++ ++AL
Sbjct: 238 ETTKTAPGVQVLKADDVEDKISSSAPAEDGTSSSSLDPVQIDLLLGKAYSAWNRPTDALT 297
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPY 328
VY+ L+K P DFR YL +G++ + +AE+ F + R P Y
Sbjct: 298 VYDALIKGRPDDFRGYLAKGVLLKEQGQASDAERMFIQARYFAPAKAKY 346
>gi|427725700|ref|YP_007072977.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 7376]
gi|427357420|gb|AFY40143.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 7376]
Length = 754
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 87/206 (42%), Gaps = 29/206 (14%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLLK 189
Y+E ++ L +PND EA ++ Q+ +A+ ++R I+ N E WQ K
Sbjct: 416 YDEALATYDELLQLSPNDWEAWWGRGKIYSDRQQYGQAITSLNRAIQGNGNNLEIWQ-TK 474
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVM--------AYDGSDKKLNEVEK 239
AQ+ + E A++ E +L+ D + A++ G + A D+ L
Sbjct: 475 AQIHLAQDDRENALRSLEAVLKLDSRQAWAWYEKGWIHHQQEQYKEAIAAYDRAL----- 529
Query: 240 RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
RI + +K S FKL + + EA Y +VK +P + QG
Sbjct: 530 RINNSDPNIWYQKGNS---YFKL---------ANYQEAKNAYGRVVKLKPDHAPAWYSQG 577
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVPRN 325
I + L K +A++ F K L P N
Sbjct: 578 IAFENLEKFRDAQQSFTKVVELEPEN 603
>gi|257059040|ref|YP_003136928.1| hypothetical protein Cyan8802_1164 [Cyanothece sp. PCC 8802]
gi|256589206|gb|ACV00093.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
Length = 286
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++ AL L+E +++ L A+ ++RL +L P + ++ +L AQ + + E A
Sbjct: 71 PDNQNALSGLLETKLRLGDLEGAITPLERLAQLNPQQPDYSILLAQAKQQLKDYEGAAAA 130
Query: 206 FEEILRKDPLRVEAYHGLVMAYDG---SDKKLNEVEKRIEKAMER---CKKEKKKSDLRD 259
++ I+ +P + A GLV S + +N V+ + + ++ E ++
Sbjct: 131 YQAIIASNPAEIRALKGLVDLLLLQSRSQEAINLVQNTLSETAKKQSLGTPETSGFNVIS 190
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
+LL+ +I ++++ EA+ VY++ ++ DFRP L + +I LR + E E
Sbjct: 191 LQLLLGEIYTSQNRYDEAIAVYDQAIETNGDDFRPLLAKAMI---LRDQGEEE 240
>gi|449453336|ref|XP_004144414.1| PREDICTED: uncharacterized protein LOC101220521 [Cucumis sativus]
Length = 389
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLL---KAQ 191
KE E L +NP D AL+ + + +A +++ LI+ + ++ + ++LL K +
Sbjct: 180 KEYEVTLRSNPKDPTALEGAAVTSAELGEYAQAASLLEDLIKEKSDDSDIFRLLGEVKYK 239
Query: 192 VQSYAGESEA---AIKGFEEILRKDPLRVEAYHGLVMAYDGSDK-------------KLN 235
++ Y G A A K FE++ E GL + + K LN
Sbjct: 240 LKDYDGSVAAYKSATKLFEDV------NFEVLRGLTNSLLAAGKPDEAVQFLLDYRDNLN 293
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
V+ K ME K D LL+ + S+A+ VY++L+ P DFR Y
Sbjct: 294 NVKLGEGKEMET----KLSIDPVQVDLLLGKSYSDWGHVSDAVSVYDQLISSHPNDFRGY 349
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
L +GII + +AE+ F + R P N
Sbjct: 350 LAKGIILKENGRSGDAERMFIQARFFAPEN 379
>gi|334317613|ref|YP_004550232.1| hypothetical protein Sinme_2911 [Sinorhizobium meliloti AK83]
gi|384537444|ref|YP_005721529.1| hypothetical protein SM11_chr3024 [Sinorhizobium meliloti SM11]
gi|334096607|gb|AEG54618.1| Tetratricopeptide TPR_1 repeat-containing protein [Sinorhizobium
meliloti AK83]
gi|336034336|gb|AEH80268.1| hypothetical protein SM11_chr3024 [Sinorhizobium meliloti SM11]
Length = 307
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 20/220 (9%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + +A+NP+D E ++ + AV D+ I+L P ++ +A
Sbjct: 73 EENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRAL 132
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS---DKKLNEVEKRIEKAMERC 248
VQ G +AA+ + L+ +P AY G Y + D N+ K I
Sbjct: 133 VQRNLGNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAI------- 185
Query: 249 KKEKKKSDLRDF--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
E +D R + + LI Q + ++H++A+ + + + P PY +GI Y
Sbjct: 186 --ELDTADPRAYHNRGLIYQAR---NQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQG 240
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
D A F F + N E + + + + G+K
Sbjct: 241 DDDNA---FSDFNTAINLNGKLAESWANQALIYERRGDKA 277
>gi|164687574|ref|ZP_02211602.1| hypothetical protein CLOBAR_01215 [Clostridium bartlettii DSM
16795]
gi|164603348|gb|EDQ96813.1| tetratricopeptide repeat protein [Clostridium bartlettii DSM 16795]
Length = 523
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 111/248 (44%), Gaps = 23/248 (9%)
Query: 88 LLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDT---TSAREDVSYEEKEKEIEQHLAA 144
++FM F+ K + A V T+ + N+ +D T ++ +++ E EI + +A
Sbjct: 47 MVFM--VFNLFKISKAGDVDITNTINTLNKLQEDLERKTFIQDMLNHANMEFEINEKMAY 104
Query: 145 NPNDIEALQTLME-------VRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
IE + IK +K A+ +++I+L+ N E K S G
Sbjct: 105 VNKIIEKYDDCADGYYYRGDFYIKFEKFYSAIKDFEKVIQLDKNYKEAYRGKGVCYSRLG 164
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKKKS 255
+++ AIK +E+ L+ DP AY+ L ++Y K +KAME +K E ++
Sbjct: 165 DNDLAIKNYEKALQIDPNYEVAYYNLGVSYSNL--------KEYDKAMESYRKALELDEN 216
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
D+ + +I ++ EAL+ + + E D R + I+ L++K +A +
Sbjct: 217 DVSAY-YNRGRILAYLGRYKEALKDFTNAINLEKYDERLLYERAGIFYLMKKYKDALLDY 275
Query: 316 EKFRRLVP 323
+ F L P
Sbjct: 276 KAFVNLAP 283
>gi|386000858|ref|YP_005919157.1| hypothetical protein Mhar_0143 [Methanosaeta harundinacea 6Ac]
gi|357208914|gb|AET63534.1| TPR repeat-containing protein [Methanosaeta harundinacea 6Ac]
Length = 609
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
K EA+ D I L+P E + + K G+ + AI+ ++E +R DP A++
Sbjct: 446 KYDEAIQAYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDPEFAGAWYNK 505
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEE 283
A DK +E + ++A+ K+ + + L VM+ K+ EA++ Y+E
Sbjct: 506 GNALYEQDK-YDEAIQAYDEAIRLNPDYKEAWNNKGNAL------VMQGKYDEAIQAYDE 558
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
++ +P P+ +G++ L K EA + + K L
Sbjct: 559 AIRLDPEFAYPWFSKGVVLEYLGKVAEANEAYAKAEEL 596
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 11/162 (6%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
K EA+ D I L PN + + K G AI+ ++E +R DP
Sbjct: 310 KYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIRLDPDNA------ 363
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKV--MESKHSEALRVY 281
M + L+E+ E + E + D + + +++ M+ K+ EA++ Y
Sbjct: 364 -MTWYNKGNALSELGNYTEGIL--AYDEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAY 420
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+E ++ +P + ++ +G + + K DEA + +++ RL P
Sbjct: 421 DEAIRLDPEEADVWVSKGNSFRMQGKYDEAIQAYDEAIRLDP 462
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 93/207 (44%), Gaps = 10/207 (4%)
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
S K T A + Y+E + ++ + +PN ++A + EA+ D I
Sbjct: 299 SNKGTVLADQG-KYDEAIQAYDEAIRLHPNYVDAWINKGSALYEQGNYPEAIQAYDEAIR 357
Query: 178 LEP-NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE 236
L+P N W K S G I ++E +R DP + + ++ S + +
Sbjct: 358 LDPDNAMTW-YNKGNALSELGNYTEGILAYDEAIRLDPEEADVW----VSKGNSFRMQGK 412
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
++ I+ E + + +++D+ K M+ K+ EA++ Y+E ++ +P + ++
Sbjct: 413 YDEAIQAYDEAIRLDPEEADVWVSK---GNSFRMQGKYDEAIQAYDEAIRLDPEEADVWV 469
Query: 297 CQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+G + + K DEA + +++ RL P
Sbjct: 470 SKGNSFRMQGKYDEAIQAYDEAIRLDP 496
>gi|121533463|ref|ZP_01665291.1| Tetratricopeptide TPR_2 repeat protein [Thermosinus carboxydivorans
Nor1]
gi|121308022|gb|EAX48936.1| Tetratricopeptide TPR_2 repeat protein [Thermosinus carboxydivorans
Nor1]
Length = 957
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 18/161 (11%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD-PLRVEAYHGLVM 225
EA+ ++D L + EPN+ + ++AG +EAAIK +E + +D P V Y
Sbjct: 259 EAITLLDWLKKQEPNDLSIAFDYITILAWAGHNEAAIKNYEALWTQDIPDYVRIY----- 313
Query: 226 AYDGSDKKLNEVEKR---IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYE 282
+++ +R +E+AM + + D R K+ +A++ + + +++ +Y+
Sbjct: 314 --------ISDAYRRTGNLEQAMAAIQPVADQGD-RKAKVRLAELWLEKGDKAKSYELYD 364
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
EL+KE +D + YL + ++ +A ++ RL+P
Sbjct: 365 ELLKENKQDIQAYLSRADSSMRRQEYSQAAADYKMALRLIP 405
>gi|270158008|ref|ZP_06186665.1| tetratricopeptide repeat domain protein [Legionella longbeachae
D-4968]
gi|269990033|gb|EEZ96287.1| tetratricopeptide repeat domain protein [Legionella longbeachae
D-4968]
Length = 1024
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y + K EQ + NP D Q + + ++ A++ I++ IE+EPN + +KA
Sbjct: 366 YPDAFKVYEQAILLNPKDAMLYQEMAQTYATAKDPQNAMNAINKAIEIEPNRISFLEIKA 425
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI--------- 241
+ ++ +S+ A + +++IL P EA GL K L VE+ +
Sbjct: 426 KYANWLKDSKLAKETYQKILTLSPGNKEAIAGLKALVHLEKKTLGPVEQLVADANNYASL 485
Query: 242 ------EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
E A+++ K K K D R FK+L ++I M +K AL + + +P +
Sbjct: 486 RQYNQAEDAVKKAIKMKPK-DPRLFKML-SEIYAMANKPQLALTAINQALALDPTNLDYL 543
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+G + K + E+ + K L P +
Sbjct: 544 RAKGKVAAWAGDKYQMEESYAKILLLKPHDQ 574
>gi|297842675|ref|XP_002889219.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335060|gb|EFH65478.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 384
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 24/230 (10%)
Query: 114 STNESTKDTTSAREDVSYEEKE------KEIEQHLAANPNDIEALQTLMEVRIKSQKLVE 167
++ TK+TT + +S EEK KE E L P D AL+ +
Sbjct: 146 GSDSPTKNTTVVKNQISEEEKATLQQRLKEFETTLTGTPKDQAALEGAAVTLTELGDYSR 205
Query: 168 AVDVIDRLIELEPNEFE-WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
A +++L + P + + ++LL ++++Y G S AA + E++ + + +E GL
Sbjct: 206 AAAFLEKLAKERPTDPDVFRLLGEVNYELKNYEG-SIAAYRISEKVSKG--IDLEVTRGL 262
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS----------DLRDFKLLIAQIKVMESK 273
+ AY + K +E K + ER +K + D +LL+ +
Sbjct: 263 MNAYLAA-KIPDEAVKFLLDTRERLNTKKTSTSDSVTDETNLDPIQVELLLGKAYSDWGH 321
Query: 274 HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
S+A+ VY++L+ P DFR L +GII + +AE+ F + R P
Sbjct: 322 ISDAIAVYDQLISAHPEDFRGCLAKGIILRENGSRGDAERMFIQARFFAP 371
>gi|399023126|ref|ZP_10725193.1| cytochrome c biogenesis factor [Chryseobacterium sp. CF314]
gi|398083685|gb|EJL74390.1| cytochrome c biogenesis factor [Chryseobacterium sp. CF314]
Length = 237
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 27/126 (21%)
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIE-------KAMERCKKE 251
A K FE ++KDP AY+GL + Y + K ++ K IE ER
Sbjct: 42 AQKEFESSIQKDPNNANAYYGLALTYSVAGDNSKAIDYFTKSIELNSDFTLAYAERGTLY 101
Query: 252 KKKSDLR----DFK-------------LLIAQIKVMESKHSEALRVYEELVKEEPRDFRP 294
D R DF L + QI++ S + EA+ +EE++K +P++
Sbjct: 102 LNSGDFRQAKKDFNKVVTLAPDLVVPYLYLGQIEIQNSNYQEAISNFEEVLKRDPKNATA 161
Query: 295 YLCQGI 300
YL +GI
Sbjct: 162 YLSKGI 167
>gi|225849348|ref|YP_002729512.1| hypothetical protein SULAZ_1547 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643614|gb|ACN98664.1| tetratricopeptide repeat domain protein [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 556
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E K + L NP +++AL L +V + A ID++I L P + + L K
Sbjct: 216 YDEAIKLYKSVLQDNPQNLDALNRLFQVYVDIDDFENASKTIDKIITLNPKDNDALLKKF 275
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ +++ ++ ++ ++++P + A L MAY+ LN+ +K E E ++
Sbjct: 276 LLYIKYDKAKEILEDLQKTVKENPDNLFAKFMLGMAYES----LNDYKKAKEIYEELYQQ 331
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGII 301
+ +L D + Q+ V ++ +AL VY +L + P D+R L I
Sbjct: 332 QPDNQELVD---RLTQVYVNLKEYDKALDVYNKLYTQNPNDYRILLAMADI 379
>gi|218441625|ref|YP_002379954.1| serine/threonine protein kinase [Cyanothece sp. PCC 7424]
gi|218174353|gb|ACK73086.1| serine/threonine protein kinase with TPR repeats [Cyanothece sp.
PCC 7424]
Length = 730
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 88/183 (48%), Gaps = 13/183 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN-EFEWQLLKAQVQSYAGESEAAIK 204
PN+ +A Q L E+++K Q A+ +++ +++ P+ E+ W +Q+ EA IK
Sbjct: 460 PNEWQAWQNLGEIQVKLQDYATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEA-IK 518
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
+E+ ++ +P +A+ Y + +N +EK + + + + DL ++
Sbjct: 519 SYEKAVKINPSFSQAW------YQKGNSYMN-LEKYSQAGESYRQAVQFQPDL--YQAWY 569
Query: 265 AQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
+Q + +++ EAL+ +EE + +P F + + L + EA + + RL
Sbjct: 570 SQGIALNRLNRYREALKAFEEGTQIQPNSFEAWYQKAWTLQTLNRYGEAVEAYNTATRLN 629
Query: 323 PRN 325
P+N
Sbjct: 630 PKN 632
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 135/336 (40%), Gaps = 54/336 (16%)
Query: 46 SCIRASSSPASQQNPKPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAP 105
S I+ SSP++ Q L++ L PL+ + + AA L
Sbjct: 319 SAIKIKSSPSNFQ-----LVKLLIPLAI-------IGLGAAGFL---------------G 351
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
V T+ + + + + Y++ + E L NPN+ + + ++
Sbjct: 352 VDYWLTLNNATKMYNKGNTLYQLQRYQDALQAYEASLDTNPNNPPTWKGKGDALQALKRY 411
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL-- 223
A++ D I+L+PN ++ + +A+V G++ AI +E+++ P +A+ L
Sbjct: 412 QNALEAYDEAIQLQPNYWQAWMERAEVLEKLGKNSEAIYSYEKVIDFTPNEWQAWQNLGE 471
Query: 224 ----VMAYDGSDKKLNE-VEKRIEKAMERCKKEKKKSDLRDFKLLIAQ----IKVMES-- 272
+ Y + LN+ ++ + +K +L++++ I +K+ S
Sbjct: 472 IQVKLQDYATALVSLNKSLQINPDDEWSWYQKGFALQNLKNYEEAIKSYEKAVKINPSFS 531
Query: 273 --------------KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
K+S+A Y + V+ +P ++ + QGI L + EA K FE+
Sbjct: 532 QAWYQKGNSYMNLEKYSQAGESYRQAVQFQPDLYQAWYSQGIALNRLNRYREALKAFEEG 591
Query: 319 RRLVPRNHPYREYFVDNMVATKIFGEKVDRESMASK 354
++ P + + +GE V+ + A++
Sbjct: 592 TQIQPNSFEAWYQKAWTLQTLNRYGEAVEAYNTATR 627
>gi|435854530|ref|YP_007315849.1| PPIC-type PPIASE family protein,tetratricopeptide repeat protein
[Halobacteroides halobius DSM 5150]
gi|433670941|gb|AGB41756.1| PPIC-type PPIASE family protein,tetratricopeptide repeat protein
[Halobacteroides halobius DSM 5150]
Length = 513
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 187 LLKAQ-VQSYA----GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI 241
++KAQ +++Y G+ + AI G++ ++ +P YH L Y KK ++V
Sbjct: 332 VIKAQAIKAYQAFKDGKYKQAISGYKAAMKNNPQASYLYHNLAQVYQ-KQKKTDKVITTY 390
Query: 242 EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGII 301
++A+++ K+ +F +A + E K +A+ +Y++++K+ + + + G +
Sbjct: 391 QEAIKKYPKQ------INFYTKLANLYKKEGKTEKAINIYKQVLKKSKGNAQLHYSLGNL 444
Query: 302 YTLLRKKDEAEKQFEKFRRLVPRN--HPYREYFV 333
Y L KKD+A Q++KF L N YR Y V
Sbjct: 445 YRELDKKDKAVAQYDKFSELSGDNIMAHYRLYTV 478
>gi|15966610|ref|NP_386963.1| hypothetical protein SMc03935 [Sinorhizobium meliloti 1021]
gi|384530738|ref|YP_005714826.1| hypothetical protein [Sinorhizobium meliloti BL225C]
gi|407721922|ref|YP_006841584.1| hypothetical protein BN406_02713 [Sinorhizobium meliloti Rm41]
gi|433614686|ref|YP_007191484.1| Tetratricopeptide repeat protein [Sinorhizobium meliloti GR4]
gi|15075882|emb|CAC47436.1| Hypothetical protein SMc03935 [Sinorhizobium meliloti 1021]
gi|333812914|gb|AEG05583.1| Tetratricopeptide TPR_1 repeat-containing protein [Sinorhizobium
meliloti BL225C]
gi|407320154|emb|CCM68758.1| hypothetical protein BN406_02713 [Sinorhizobium meliloti Rm41]
gi|429552876|gb|AGA07885.1| Tetratricopeptide repeat protein [Sinorhizobium meliloti GR4]
Length = 295
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 20/220 (9%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + +A+NP+D E ++ + AV D+ I+L P ++ +A
Sbjct: 61 EENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRAL 120
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS---DKKLNEVEKRIEKAMERC 248
VQ G +AA+ + L+ +P AY G Y + D N+ K I
Sbjct: 121 VQRNLGNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAI------- 173
Query: 249 KKEKKKSDLRDF--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
E +D R + + LI Q + ++H++A+ + + + P PY +GI Y
Sbjct: 174 --ELDTADPRAYHNRGLIYQAR---NQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQG 228
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
D A F F + N E + + + + G+K
Sbjct: 229 DDDNA---FSDFNTAINLNGKLAESWANQALIYERRGDKA 265
>gi|148558498|ref|YP_001257882.1| hypothetical protein BOV_A0905 [Brucella ovis ATCC 25840]
gi|148369783|gb|ABQ62655.1| TPR domain protein [Brucella ovis ATCC 25840]
Length = 295
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 100/246 (40%), Gaps = 26/246 (10%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+++
Sbjct: 43 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKARRY 96
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 97 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGN 156
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 157 VYRQAGHLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 204
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ + + PY +GI Y L D A F+ F + + E + + + +
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYE 261
Query: 341 IFGEKV 346
G+K
Sbjct: 262 HNGDKA 267
>gi|114705557|ref|ZP_01438460.1| O-linked GlcNAc transferase [Fulvimarina pelagi HTCC2506]
gi|114538403|gb|EAU41524.1| O-linked GlcNAc transferase [Fulvimarina pelagi HTCC2506]
Length = 293
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 108/259 (41%), Gaps = 12/259 (4%)
Query: 89 LFMRLPFHSIKPAIAAPVAAA--ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANP 146
+ R P + KPA A VA A + ++ +E + + + ++ + Q + ANP
Sbjct: 16 VIARRPHIAFKPAFAVLVAVAILSGCQTGSEPMVNAIALDANQGLDQNISSLTQTVNANP 75
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGF 206
D EA +S + A+ I L+PN + +A + GE A++ +
Sbjct: 76 QDPEAYNVRGTAYGRSGQNEAAIQDFTTAISLDPNFHQAYANRALIYRQTGERLKAVEDY 135
Query: 207 EEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQ 266
L+ +P AY G Y + + E ++A++ + + R L+ Q
Sbjct: 136 NRALQINPNYTSAYIGRGNIYRLAGRN-REALVDFQRAIDLNTTDPRAYHNRG---LLYQ 191
Query: 267 IKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
I + +HS+A+ + + + + PY +G+ Y L + A F+ +L +
Sbjct: 192 I---DGQHSQAIEDFSKAISLQSTAAEPYSGRGVSYLALNDIENAAADFQAALKL---DQ 245
Query: 327 PYREYFVDNMVATKIFGEK 345
EY+V+ V + G++
Sbjct: 246 TKAEYWVNQAVLLERQGDR 264
>gi|17988679|ref|NP_541312.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str. 16M]
gi|17984487|gb|AAL53576.1| tetratricopeptide repeat family protein [Brucella melitensis bv. 1
str. 16M]
Length = 255
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 26/246 (10%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+ +
Sbjct: 3 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKAGRY 56
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 57 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGN 116
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 117 VYRQAGHLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 164
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ + + PY +GI Y L D A F+ F + + E + + + +
Sbjct: 165 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYE 221
Query: 341 IFGEKV 346
G+K
Sbjct: 222 HNGDKA 227
>gi|418403667|ref|ZP_12977150.1| hypothetical protein SM0020_26201 [Sinorhizobium meliloti
CCNWSX0020]
gi|359502351|gb|EHK74930.1| hypothetical protein SM0020_26201 [Sinorhizobium meliloti
CCNWSX0020]
Length = 290
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 20/220 (9%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + +A+NP+D E ++ + AV D+ I+L P ++ +A
Sbjct: 56 EENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRAL 115
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS---DKKLNEVEKRIEKAMERC 248
VQ G +AA+ + L+ +P AY G Y + D N+ K I
Sbjct: 116 VQRNLGNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAI------- 168
Query: 249 KKEKKKSDLRDF--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
E +D R + + LI Q + ++H++A+ + + + P PY +GI Y
Sbjct: 169 --ELDTADPRAYHNRGLIYQAR---NQHAQAIEDFSKAISLSPSSPEPYNGRGISYVAQG 223
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
D A F F + N E + + + + G+K
Sbjct: 224 DDDNA---FSDFNTAINLNGKLAESWANQALIYERRGDKA 260
>gi|224534323|ref|ZP_03674901.1| surface-located membrane protein 1 [Borrelia spielmanii A14S]
gi|224514425|gb|EEF84741.1| surface-located membrane protein 1 [Borrelia spielmanii A14S]
Length = 1012
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ ++ R+ ++PN+ E + Q
Sbjct: 568 KDLNEFLTTNPNDAHAAKTLAQ----ANKIQHLENLKSRVHSIKPNDLENPKTRQQ---- 619
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK-EKKK 254
AIK E L +P A L AY+ + L ++E E+ K +
Sbjct: 620 ------AIKDLNEFLTTNPNDAHAAKTLAQAYENNGDLL-----KVENVYEKITKLTNNQ 668
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
D +KL I + K+ + +HS + +++ ++ +P+ + + +GI +L K +A +
Sbjct: 669 EDY--YKLGIIRFKLKKYEHS--IEAFDQTIRLDPKHKKAHNNKGIALMMLNKNKKAIES 724
Query: 315 FEK 317
FEK
Sbjct: 725 FEK 727
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+I A+ L + ++ KL EA+++I++ I L P + E+ LKA + + + AI
Sbjct: 802 PNEI-AIYNLSIAKFENNKLKEALEIINKAINLNPEKSEYLYLKASINLKSENYQNAISL 860
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ ++ K+P AY L AY+ S K
Sbjct: 861 YNLVIEKNPENTSAYINLAKAYEKSGNK 888
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE---FEWQLLKAQV 192
K++ + L NPND A +TL + + L++ +V +++ +L N+ ++ +++ ++
Sbjct: 622 KDLNEFLTTNPNDAHAAKTLAQAYENNGDLLKVENVYEKITKLTNNQEDYYKLGIIRFKL 681
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIE 242
+ Y E +I+ F++ +R DP +A++ +M + + K + EK I+
Sbjct: 682 KKY----EHSIEAFDQTIRLDPKHKKAHNNKGIALMMLNKNKKAIESFEKAIQ 730
>gi|148264628|ref|YP_001231334.1| TPR repeat-containing protein [Geobacter uraniireducens Rf4]
gi|146398128|gb|ABQ26761.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 729
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A NP I+A L ++ + Q LVEA +D +I+ P + LK + + A
Sbjct: 333 AKNPEVIQAKNALAKIYLAGQDLVEAGKYVDEVIKASPKNVDGHFLKGSIALLKNDGVNA 392
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
+ F ++ + P ++ Y L A+ ++++N + ++ A+ K + D +
Sbjct: 393 VAEFRTVVAEQPQSIQGYLRLAEAH-ALNREMNLMNDTLQNAL------KVDPESSDVQR 445
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
+A+ M+ +A +LV++ P D G ++ R AE ++ +R V
Sbjct: 446 AMARSYAMQKDFRKAEEQLRKLVRKYPGDMEARSDLGDVFVAARDFGRAESEYADLKRKV 505
Query: 323 PR 324
P+
Sbjct: 506 PQ 507
>gi|189022474|ref|YP_001932215.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
S19]
gi|189021048|gb|ACD73769.1| RNA-binding region RNP-1 (RNA recognition motif) [Brucella abortus
S19]
Length = 283
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 20/210 (9%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
+ +NP D E K+ + EA+ D+ I L PN ++ +A V Y G++
Sbjct: 61 IQSNPRDPEGYNVRGSAYGKAGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNK 120
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLR 258
A++ + ++ +P AY G Y + D+ LN+ + I + +D R
Sbjct: 121 AVQDYSRAIQLNPQYDAAYIGRGNVYRQAGHLDQALNDFNQAI---------ALRTTDGR 171
Query: 259 DF--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
+ + LI Q K + H +A+ + + + PY +GI Y L D A F+
Sbjct: 172 AYHNRGLIYQAKGL---HKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNA---FD 225
Query: 317 KFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
F + + E + + + + G+K
Sbjct: 226 DFNTAITLDQNVAESWANQALVYEHNGDKA 255
>gi|330444072|ref|YP_004377058.1| hypothetical protein G5S_0355 [Chlamydophila pecorum E58]
gi|328807182|gb|AEB41355.1| TPR domain protein [Chlamydophila pecorum E58]
Length = 339
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 87/189 (46%), Gaps = 11/189 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE ++ ++ +P DIE +L V + Q+ EA+ D ++EL+P + KA
Sbjct: 93 YEEAIEQYRAYVTLHPEDIECWFSLGGVYHRLQRHQEAIHCFDAVLELDPANSQSLYNKA 152
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERC 248
V S E A+K E ++K+PL +A+ G +++ +KK ++ + E+ ++
Sbjct: 153 IVFSDMAEEGEAMKLLESTVKKNPLYWKAWVKLGFLLS---RNKKWDKATEAYERVVQL- 208
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ DL D + ++ K AL+ ++E + D + G+ Y L++
Sbjct: 209 -----RPDLADGHYNLGLCYLILDKTRLALKAFQEALFLNEEDADAHFYTGLAYMDLKQA 263
Query: 309 DEAEKQFEK 317
A F +
Sbjct: 264 SRAHDAFHR 272
>gi|147821837|emb|CAN63743.1| hypothetical protein VITISV_041630 [Vitis vinifera]
Length = 410
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 124 SAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF 183
S E + + + ++ E L+++P D AL+ ++ + A +++ ++ +PN+
Sbjct: 181 SEEEKATLQARLQQYEATLSSSPKDQTALEAAAVTLVELGEYTRAASLLEDFVKEKPNDP 240
Query: 184 E-WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
E ++LL K ++ Y G S AA + ++ + + E GL A + KK +E +
Sbjct: 241 EAFRLLGEVKFALKDYEG-SAAAYRSSAKV--SETVDFEVLRGLTNALLAA-KKPDEAVQ 296
Query: 240 RIEKAMERCKKEKKKS-----------------DLRDFKLLIAQIKVMESKHSEALRVYE 282
+ + ER KEK + D +LL+ + S+A+ VY+
Sbjct: 297 VLLASRERLNKEKSSNLNIKSDSGTKETESQEVDPVQVELLLGKAYSDWGHISDAVSVYD 356
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+L+ P DFR YL +GII +AE+ F + R P
Sbjct: 357 QLISSHPEDFRGYLAKGIILKENGNIGDAERMFIQARFFAP 397
>gi|270210255|gb|ACZ64519.1| IFT88-like protein [Schmidtea mediterranea]
Length = 294
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P+++E ++ L I+SQ +A+ +R ++P++ +W L+ A +G + A++
Sbjct: 97 PSNLEVIEWLGAYYIESQFCEKAISYFERAALMQPSQVKWLLMIASCHRRSGNYQQALET 156
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA 265
++ I RK P VE LV Y +D L E + + R KK +K+ ++R+ +L
Sbjct: 157 YKSIHRKFPDNVECLQFLVRIY--TDMGLPEA----AEYLNRLKKAEKQKEIREKRLTTG 210
Query: 266 QIKVMESKHSEALRV 280
+ S LRV
Sbjct: 211 LARRGSLLGSTGLRV 225
>gi|412992352|emb|CCO20065.1| predicted protein [Bathycoccus prasinos]
Length = 381
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 115/270 (42%), Gaps = 49/270 (18%)
Query: 73 SPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYE 132
SP+++I S+ +AA AL + +P AI S K A ED+ E
Sbjct: 117 SPIVRIGSL-LAAIALAIVFIPTDLTFNAIG----------SKQVQEKYRKEALEDI--E 163
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
+++ E+ + L + PND E L+ + + A+ ++++L+ LE E + A+V
Sbjct: 164 KQKDELTKVLESTPNDPELLKQQAKNFLALDDYPSALPLMEKLVSLEDTEANSMAI-AEV 222
Query: 193 QSYAGESEAAIKGFEEILRK------------------DPLRVEAYHGLVMAYDGSDKKL 234
+ G+ E A+ ++ K D L G+ +AY
Sbjct: 223 WNLDGQPERALSVLKDYADKHLSDSSGPPSASFLKALTDSLSKNNRQGVALAY------- 275
Query: 235 NEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI-KVMESKHSEALRVYEELVKEEPRDFR 293
V+ + KK D D +LL A++ + K EA + + ++V++ P DFR
Sbjct: 276 --VDAFV-------KKNPGDIDDVDAELLKARVYSGWKGKGKEAEKAFSDVVEKHPEDFR 326
Query: 294 PYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
YL +G+ + + DEA F++ L P
Sbjct: 327 GYLARGVFMREIGRPDEATSMFKQAEALAP 356
>gi|333980834|ref|YP_004518779.1| hypothetical protein Desku_3498 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824315|gb|AEG16978.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 192
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
E+E ANP D + L + + K+ +A+ ++ ++L P ++++ A VQ
Sbjct: 59 ELESQARANPEDADVAARLARAYLDAGKMEQALKTYEKAVQLRPENSDFRIELALVQFLL 118
Query: 197 GESEAAIKGFEEILRKDP--LRVEAYHGLVMAYDGSD--KKLNEVEKRIEKA 244
G ++ A+ FEE +R+ P R Y+G V+A D + E+EK I+ A
Sbjct: 119 GRNDEAVANFEEEIRRHPDNARAHYYYGQVLALGKGDYEGGIRELEKFIQLA 170
>gi|23500690|ref|NP_700130.1| TPR domain-containing protein [Brucella suis 1330]
gi|62317211|ref|YP_223064.1| hypothetical protein BruAb2_0269 [Brucella abortus bv. 1 str.
9-941]
gi|83269193|ref|YP_418484.1| hypothetical protein BAB2_0271 [Brucella melitensis biovar Abortus
2308]
gi|161621016|ref|YP_001594902.1| hypothetical protein BCAN_B0985 [Brucella canis ATCC 23365]
gi|163845077|ref|YP_001622732.1| hypothetical protein BSUIS_B0956 [Brucella suis ATCC 23445]
gi|225686724|ref|YP_002734696.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
gi|256015725|ref|YP_003105734.1| TPR domain-containing protein [Brucella microti CCM 4915]
gi|256262142|ref|ZP_05464674.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
gi|260544449|ref|ZP_05820270.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
gi|260565013|ref|ZP_05835498.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
16M]
gi|260567784|ref|ZP_05838253.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
gi|260756289|ref|ZP_05868637.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
gi|260759716|ref|ZP_05872064.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
gi|260762956|ref|ZP_05875288.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260882112|ref|ZP_05893726.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
gi|261217555|ref|ZP_05931836.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
gi|261320430|ref|ZP_05959627.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
gi|261750658|ref|ZP_05994367.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
gi|261753914|ref|ZP_05997623.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
gi|265990258|ref|ZP_06102815.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265992636|ref|ZP_06105193.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|297249260|ref|ZP_06932961.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
gi|376278911|ref|YP_005108944.1| TPR domain-containing protein [Brucella suis VBI22]
gi|384223472|ref|YP_005614637.1| hypothetical protein BS1330_II0956 [Brucella suis 1330]
gi|423168901|ref|ZP_17155603.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
gi|423171666|ref|ZP_17158340.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
gi|423174604|ref|ZP_17161274.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
gi|423176481|ref|ZP_17163147.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
gi|423181095|ref|ZP_17167735.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
gi|423184228|ref|ZP_17170864.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
gi|423187377|ref|ZP_17173990.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
gi|423189799|ref|ZP_17176408.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
gi|23464339|gb|AAN34135.1| TPR domain protein [Brucella suis 1330]
gi|62197404|gb|AAX75703.1| TPR domain protein [Brucella abortus bv. 1 str. 9-941]
gi|82939467|emb|CAJ12437.1| RNA-binding region RNP-1 (RNA recognition motif):TPR repeat
[Brucella melitensis biovar Abortus 2308]
gi|161337827|gb|ABX64131.1| TPR repeat-containing protein [Brucella canis ATCC 23365]
gi|163675800|gb|ABY39910.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225642829|gb|ACO02742.1| TPR repeat-containing protein [Brucella melitensis ATCC 23457]
gi|255998385|gb|ACU50072.1| TPR domain protein [Brucella microti CCM 4915]
gi|260097720|gb|EEW81594.1| RNA-binding region RNP-1 protein [Brucella abortus NCTC 8038]
gi|260152656|gb|EEW87749.1| RNA-binding region RNP-1 protein [Brucella melitensis bv. 1 str.
16M]
gi|260154449|gb|EEW89530.1| RNA-binding region RNP-1 protein [Brucella suis bv. 4 str. 40]
gi|260670034|gb|EEX56974.1| TPR repeat-containing protein [Brucella abortus bv. 4 str. 292]
gi|260673377|gb|EEX60198.1| TPR repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260676397|gb|EEX63218.1| TPR repeat-containing protein [Brucella abortus bv. 6 str. 870]
gi|260871640|gb|EEX78709.1| TPR repeat-containing protein [Brucella abortus bv. 9 str. C68]
gi|260922644|gb|EEX89212.1| TPR repeat-containing protein [Brucella ceti M13/05/1]
gi|261293120|gb|EEX96616.1| TPR repeat-containing protein [Brucella ceti M644/93/1]
gi|261740411|gb|EEY28337.1| TPR repeat-containing protein [Brucella suis bv. 5 str. 513]
gi|261743667|gb|EEY31593.1| TPR repeat-containing protein [Brucella suis bv. 3 str. 686]
gi|262763506|gb|EEZ09538.1| TPR repeat-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000927|gb|EEZ13617.1| TPR repeat-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091843|gb|EEZ16165.1| RNA-binding region RNP-1 [Brucella melitensis bv. 2 str. 63/9]
gi|297173129|gb|EFH32493.1| hypothetical protein BAYG_02006 [Brucella abortus bv. 5 str. B3196]
gi|343384920|gb|AEM20411.1| TPR domain-containing protein [Brucella suis 1330]
gi|358260349|gb|AEU08082.1| TPR domain-containing protein [Brucella suis VBI22]
gi|374536088|gb|EHR07608.1| hypothetical protein M19_02198 [Brucella abortus bv. 1 str. NI474]
gi|374538107|gb|EHR09617.1| hypothetical protein M17_02590 [Brucella abortus bv. 1 str. NI435a]
gi|374539173|gb|EHR10679.1| hypothetical protein M1A_02001 [Brucella abortus bv. 1 str. NI486]
gi|374545685|gb|EHR17145.1| hypothetical protein M1G_02194 [Brucella abortus bv. 1 str. NI010]
gi|374546528|gb|EHR17987.1| hypothetical protein M1I_02196 [Brucella abortus bv. 1 str. NI016]
gi|374553496|gb|EHR24911.1| hypothetical protein M1E_00743 [Brucella abortus bv. 1 str. NI488]
gi|374555181|gb|EHR26590.1| hypothetical protein M1K_02194 [Brucella abortus bv. 1 str. NI021]
gi|374555839|gb|EHR27244.1| hypothetical protein M1M_01480 [Brucella abortus bv. 1 str. NI259]
Length = 295
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 26/246 (10%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+ +
Sbjct: 43 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKAGRY 96
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 97 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGN 156
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 157 VYRQAGHLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 204
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ + + PY +GI Y L D A F+ F + + E + + + +
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYE 261
Query: 341 IFGEKV 346
G+K
Sbjct: 262 HNGDKA 267
>gi|306846174|ref|ZP_07478736.1| TPR domain-containing protein [Brucella inopinata BO1]
gi|306273425|gb|EFM55286.1| TPR domain-containing protein [Brucella inopinata BO1]
Length = 283
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 26/246 (10%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+ +
Sbjct: 31 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKAGRY 84
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 85 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGN 144
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 145 VYRQAGRLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 192
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ + + PY +GI Y L D A F+ F + + E + + + +
Sbjct: 193 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYE 249
Query: 341 IFGEKV 346
G+K
Sbjct: 250 HNGDKA 255
>gi|261220776|ref|ZP_05935057.1| TPR repeat-containing protein [Brucella ceti B1/94]
gi|261312977|ref|ZP_05952174.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
gi|261318373|ref|ZP_05957570.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
gi|261757156|ref|ZP_06000865.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
gi|265986173|ref|ZP_06098730.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
gi|265995868|ref|ZP_06108425.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
gi|340792731|ref|YP_004758195.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
gi|260919360|gb|EEX86013.1| TPR repeat-containing protein [Brucella ceti B1/94]
gi|261297596|gb|EEY01093.1| TPR repeat-containing protein [Brucella pinnipedialis B2/94]
gi|261302003|gb|EEY05500.1| TPR repeat-containing protein [Brucella pinnipedialis M163/99/10]
gi|261737140|gb|EEY25136.1| RNA-binding region RNP-1 [Brucella sp. F5/99]
gi|262550165|gb|EEZ06326.1| TPR repeat-containing protein [Brucella ceti M490/95/1]
gi|264658370|gb|EEZ28631.1| TPR repeat-containing protein [Brucella pinnipedialis M292/94/1]
gi|340561190|gb|AEK56427.1| TPR repeat domain-containing protein [Brucella pinnipedialis B2/94]
Length = 295
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 26/246 (10%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+ +
Sbjct: 43 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKAGRY 96
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 97 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGN 156
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 157 VYRQAGHLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 204
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ + + PY +GI Y L D A F+ F + + E + + + +
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYE 261
Query: 341 IFGEKV 346
G+K
Sbjct: 262 HNGDKA 267
>gi|163851391|ref|YP_001639434.1| hypothetical protein Mext_1964 [Methylobacterium extorquens PA1]
gi|254561150|ref|YP_003068245.1| hypothetical protein METDI2727 [Methylobacterium extorquens DM4]
gi|163662996|gb|ABY30363.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
PA1]
gi|254268428|emb|CAX24385.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens DM4]
Length = 286
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 27/208 (12%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP+D A T ++ + EA+ + I+L+PN +A G ++AA++
Sbjct: 64 NPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQ 123
Query: 205 GFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIE-----------KAMERCKK 250
F + + DP AY G L A D LN++ I + + R K+
Sbjct: 124 DFSKAIANDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQ 183
Query: 251 EKKKSDLRDFKLLI-------------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
+ DF I Q + ++ +A+ + + +D +
Sbjct: 184 NHNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLGQYDKAIEDFNAALNVNSKDAGSWAY 243
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+G+ Y ++ EA + +++ RL P N
Sbjct: 244 RGLAYEKTNRRKEANESYQQAARLDPNN 271
>gi|218530199|ref|YP_002421015.1| hypothetical protein Mchl_2240 [Methylobacterium extorquens CM4]
gi|240138554|ref|YP_002963026.1| hypothetical protein MexAM1_META1p1938 [Methylobacterium extorquens
AM1]
gi|418061679|ref|ZP_12699523.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
gi|218522502|gb|ACK83087.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium extorquens
CM4]
gi|240008523|gb|ACS39749.1| conserved hypothetical protein; putative exported protein
[Methylobacterium extorquens AM1]
gi|373564765|gb|EHP90850.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylobacterium
extorquens DSM 13060]
Length = 286
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 27/208 (12%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP+D A T ++ + EA+ + I+L+PN +A G ++AA++
Sbjct: 64 NPSDAGAYNTRGAAYARAGQFGEAITDFSKAIQLDPNSASAYNNRALAYRQTGRADAAMQ 123
Query: 205 GFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIE-----------KAMERCKK 250
F + + DP AY G L A D LN++ I + + R K+
Sbjct: 124 DFSKAIANDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQ 183
Query: 251 EKKKSDLRDFKLLI-------------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
+ DF I Q + ++ +A+ + + +D +
Sbjct: 184 NHNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLGQYDKAIEDFNAALNVNAKDAGSWAY 243
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+G+ Y ++ EA + +++ RL P N
Sbjct: 244 RGLAYEKTNRRKEANESYQQAARLDPNN 271
>gi|306841308|ref|ZP_07474017.1| TPR domain-containing protein [Brucella sp. BO2]
gi|306288611|gb|EFM59947.1| TPR domain-containing protein [Brucella sp. BO2]
Length = 283
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 99/242 (40%), Gaps = 23/242 (9%)
Query: 110 ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAV 169
A +STN ST T + S E + + +NP D E K+ + EA+
Sbjct: 32 AGCQSTN-STLSTVDRAQGSS--ENISSLTSVIQSNPRDPEGYNVRGSAYGKAGRYKEAM 88
Query: 170 DVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDG 229
D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G Y
Sbjct: 89 RDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGNVYRQ 148
Query: 230 S---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRVYEEL 284
+ D+ LN+ + I + +D R + + LI Q K + H +A+ + +
Sbjct: 149 AGRLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIEDFSKA 196
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGE 344
+ PY +GI Y L D A F+ F + + E + + + + G+
Sbjct: 197 ISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYEHNGD 253
Query: 345 KV 346
K
Sbjct: 254 KA 255
>gi|428202816|ref|YP_007081405.1| tetratricopeptide repeat protein,protein kinase family protein
[Pleurocapsa sp. PCC 7327]
gi|427980248|gb|AFY77848.1| tetratricopeptide repeat protein,protein kinase family protein
[Pleurocapsa sp. PCC 7327]
Length = 739
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 83/179 (46%), Gaps = 41/179 (22%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
EQ L P EA Q +V ++ E++ ++ I+++PN ++ +L +AQV G+
Sbjct: 381 EQALKIRPEYGEAWQGKGDVFQAQKRYKESLIAYEKAIQIQPNRWQPRLGRAQVLDKLGK 440
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
++ AI+ ++++++ P EA+ GL
Sbjct: 441 NQEAIETYKKVIKIKPNLAEAWLGL----------------------------------- 465
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
AQ+++ +++SEA+ Y+ L+K +P + + QG + LR+ ++A K ++K
Sbjct: 466 ------AQVQMELNQYSEAIASYDRLLKMQPENSLAWYQQGWAWQNLREYEKAIKSYDK 518
>gi|406916724|gb|EKD55678.1| TPR protein [uncultured bacterium]
Length = 553
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL---VEAVDVIDRLIELEPNEFEWQL 187
YE+ K I+ LAA +++ AL ++ IKS+K+ +E++ + + +I+ EP +
Sbjct: 295 YEQALKIIDDLLAAEKDNLNALMLKGKILIKSEKISENLESIAIFNEIIKREPYKLSAYE 354
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMER 247
KA+ AA+ +EEI+R ++ YH L+ D K + RI++A+
Sbjct: 355 SKARAFENCEMVPAAVMTYEEIIRNGIATIDTYHKLI-----EDLK---IVGRIDEAIA- 405
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHS 275
C +E K + DF+ +I + +++ K +
Sbjct: 406 CAEEMIKINYLDFEFMIIKTELLMLKGT 433
>gi|398824104|ref|ZP_10582449.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. YR681]
gi|398225243|gb|EJN11520.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. YR681]
Length = 461
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 13/199 (6%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D EA + V ++L A+ DR I+L+P+ + + G++E AI+
Sbjct: 140 DAEAYELRGVVYTNQRRLERALADYDRAIKLKPDYAQAWSDRGATYYLGGDNEKAIRDLS 199
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
E LR DP R +Y AY KKL +++K + E + + K + D + L +
Sbjct: 200 EALRLDPNRARSYTNRGAAY----KKLGQLDKSVADDGEAIRLDPKVPEYYDNRGL--SL 253
Query: 268 KVMESKHSEALRVYEELVKEEPR-DFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
M K+ EA+ Y++ ++ P+ +F + +G Y L + A +E +L P
Sbjct: 254 AAM-GKYDEAIADYDQALRLAPKPNF--FTNRGDSYQLKGELGAALGDYESALKLDPN-- 308
Query: 327 PYREYFVDNMVATKIFGEK 345
+ + + + V K GE+
Sbjct: 309 -FAQTYNNRAVLYKKMGER 326
>gi|414078285|ref|YP_006997603.1| hypothetical protein ANA_C13102 [Anabaena sp. 90]
gi|413971701|gb|AFW95790.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 1342
Score = 47.8 bits (112), Expect = 0.009, Method: Composition-based stats.
Identities = 42/199 (21%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E ++ L NPN +A + + K EA+ D+ I L PN+F+ +
Sbjct: 588 YPESIAAYDKALKINPNFAQAWKDRGRLLFTLDKYSEALTSFDKAITLSPNQFDLYYWRG 647
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Y AI+ + + ++ +PL AY+ +Y +L + I + +
Sbjct: 648 FTLHYLKRFPEAIEAYNQSIKINPLFKFAYNVRSFSY----VELKNYRQAITDLTQAIQL 703
Query: 251 EKKKSDLRDFK-LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ K + +F+ LL Q++ ++ +++ + ++ +P++ + Y +GI Y L++
Sbjct: 704 DPKDAVSYNFRGLLYGQLE----EYKQSIADSTQAIQLDPKNAKYYNSRGIAYEGLKEYK 759
Query: 310 EAEKQFEKFRRLVPRNHPY 328
+A + + +L P+N Y
Sbjct: 760 QAINDYTQAIQLDPKNAKY 778
>gi|237816772|ref|ZP_04595764.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
gi|376270821|ref|YP_005113866.1| hypothetical protein BAA13334_II00651 [Brucella abortus A13334]
gi|376277527|ref|YP_005153588.1| hypothetical protein BCA52141_II1638 [Brucella canis HSK A52141]
gi|384213475|ref|YP_005602558.1| hypothetical protein BM590_B0937 [Brucella melitensis M5-90]
gi|384410576|ref|YP_005599196.1| hypothetical protein BM28_B0938 [Brucella melitensis M28]
gi|384447076|ref|YP_005661294.1| hypothetical protein [Brucella melitensis NI]
gi|237787585|gb|EEP61801.1| TPR domain-containing protein [Brucella abortus str. 2308 A]
gi|326411123|gb|ADZ68187.1| TPR repeat-containing protein [Brucella melitensis M28]
gi|326554415|gb|ADZ89054.1| TPR repeat-containing protein [Brucella melitensis M5-90]
gi|349745073|gb|AEQ10615.1| TPR repeat-containing protein [Brucella melitensis NI]
gi|363401993|gb|AEW18962.1| TPR repeat-containing protein [Brucella abortus A13334]
gi|363405901|gb|AEW16195.1| TPR repeat-containing protein [Brucella canis HSK A52141]
Length = 315
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 26/246 (10%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+ +
Sbjct: 63 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKAGRY 116
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 117 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGN 176
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 177 VYRQAGHLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 224
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ + + PY +GI Y L D A F+ F + + E + + + +
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYE 281
Query: 341 IFGEKV 346
G+K
Sbjct: 282 HNGDKA 287
>gi|222636850|gb|EEE66982.1| hypothetical protein OsJ_23874 [Oryza sativa Japonica Group]
Length = 547
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
DL LL+ + S+A+ VYE L+ E P DFR YL +GII K EAE+ F
Sbjct: 340 DLIQVDLLLGKAYSDWGHISDAVAVYENLITEHPEDFRGYLAKGIILKENGKSGEAERMF 399
Query: 316 EKFRRLVP 323
+ + P
Sbjct: 400 IQAKFFAP 407
>gi|218245989|ref|YP_002371360.1| hypothetical protein PCC8801_1134 [Cyanothece sp. PCC 8801]
gi|218166467|gb|ACK65204.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
Length = 286
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++ AL L+E +++ L A+ ++RL +L P + ++ +L AQ + + E A
Sbjct: 71 PDNQNALSGLLETKLRLGDLEGAITPLERLAQLNPQQPDYSILLAQAKQQLKDYEGAAAA 130
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK------EKKKSDLRD 259
++ I+ +P + A GLV + + E KK E ++
Sbjct: 131 YQAIIASNPAEIRALKGLVDLLLLQSRSQEAITLVQNTLSETAKKQSLGTPETSGFNVIS 190
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
+LL+ +I ++++ EA+ VY++ ++ DFRP L + +I LR + E E
Sbjct: 191 LQLLLGEIYTSQNRYDEAIAVYDQAIETNGDDFRPLLAKAMI---LRDQGEEE 240
>gi|239832614|ref|ZP_04680943.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|444309662|ref|ZP_21145294.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
gi|239824881|gb|EEQ96449.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|443486929|gb|ELT49699.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
Length = 295
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 18/209 (8%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
+ +NP D E KS + EA+ D+ I L PN ++ +A V Y G+S
Sbjct: 73 IQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTR 132
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKKKSDLRD 259
A + + + ++ +P AY G Y R+++A+ + + +D R
Sbjct: 133 AAQDYSKAIQLNPQYDAAYIGRGNVY--------RQAGRLDQALSDFNQAIALQTTDGRA 184
Query: 260 F--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+ + LI Q K +H +A+ + + V PY +GI Y L D A F+
Sbjct: 185 YHNRGLIYQAK---GQHKQAIEDFSKAVSLNSTAPEPYNGRGISYVALGDYDNA---FDD 238
Query: 318 FRRLVPRNHPYREYFVDNMVATKIFGEKV 346
F + + E + + + + G+K
Sbjct: 239 FNTAITLDQNVAESWANQALVYEHNGDKA 267
>gi|379335302|gb|AFD03286.1| TPR repeat-containing protein [uncultured archaeon W4-93a]
Length = 272
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 7/179 (3%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +P ++EAL + +K +A+ D+++E+ PN+ KA Q+ G +
Sbjct: 37 LKQDPKNVEALHNKGLALNQMKKYSDAITCFDKILEISPNDAPAFNNKAIAQAELGNTVD 96
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A + ++ ++ DP A+ + +D +L+ E I+ E K + KK + +K
Sbjct: 97 AFENYDRAIKADPKYAAAHFNKGVLFD----RLSSHEDAIKCLEEAIKLDPKKLNALFYK 152
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
++ + ME KH E+L ++ + K PR +GI + L + ++A + F+ R
Sbjct: 153 GVV--LGKME-KHEESLNCFQLVCKTNPRHLDALFHKGIEFAQLEQHEKAIRIFDDLLR 208
>gi|225629417|ref|ZP_03787450.1| TPR domain-containing protein [Brucella ceti str. Cudo]
gi|225615913|gb|EEH12962.1| TPR domain-containing protein [Brucella ceti str. Cudo]
Length = 315
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 26/246 (10%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+ +
Sbjct: 63 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKAGRY 116
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 117 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGN 176
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 177 VYRQAGHLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 224
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ + + PY +GI Y L D A F+ F + + E + + + +
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYE 281
Query: 341 IFGEKV 346
G+K
Sbjct: 282 HNGDKA 287
>gi|398825329|ref|ZP_10583630.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
gi|398223937|gb|EJN10265.1| tetratricopeptide repeat protein [Bradyrhizobium sp. YR681]
Length = 368
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
VR+ + A+D + + LEP +A V +++ AI+ F+E+ R DP
Sbjct: 192 NVRVNKGEFDAALDDCNNSVRLEPGSAGGHFCRAVVLLKWDDADGAIQEFDEVTRLDPTF 251
Query: 217 VEAYHGLVMAYD--GSDKK-LNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMES 272
+ AY +A+ G DK+ + + ++ I K ++ LR+
Sbjct: 252 MRAYSARALAWHKKGDDKRAVADFDEAIRLQPGNATGYKNRAMALREL-----------G 300
Query: 273 KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+H+ AL Y E ++ +PRD + + ++Y ++ A F L P +
Sbjct: 301 QHARALADYNEALRIDPRDQDALVNRALLYMMMSDTKHARADFNSVLALPPND 353
>gi|306838683|ref|ZP_07471519.1| TPR domain-containing protein [Brucella sp. NF 2653]
gi|306406326|gb|EFM62569.1| TPR domain-containing protein [Brucella sp. NF 2653]
Length = 283
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 26/250 (10%)
Query: 102 IAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIK 161
+A VA + ST + + E++S + + +NP D E K
Sbjct: 27 LALTVAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGK 80
Query: 162 SQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
+ + EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY
Sbjct: 81 AGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYI 140
Query: 222 GLVMAYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSE 276
G Y + D+ LN + I + +D R + + LI Q K + H +
Sbjct: 141 GRGNVYRQAGRLDQALNNFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQ 188
Query: 277 ALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNM 336
A+ + + + PY +GI Y L D A F+ F + + E + +
Sbjct: 189 AIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNA---FDDFNTAITLDQNVAESWANQA 245
Query: 337 VATKIFGEKV 346
+ + G+K
Sbjct: 246 LVYEHNGDKA 255
>gi|449500103|ref|XP_004161005.1| PREDICTED: uncharacterized protein LOC101223867 [Cucumis sativus]
Length = 256
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 30/210 (14%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLL---KAQ 191
KE E L +NP D AL+ + + +A +++ LI+ + ++ + ++LL K +
Sbjct: 47 KEYEVTLRSNPKDPTALEGAAVTSAELGEYAQAASLLEDLIKEKSDDSDIFRLLGEVKYK 106
Query: 192 VQSYAGESEA---AIKGFEEILRKDPLRVEAYHGLVMAYDGSDK-------------KLN 235
++ Y G A A K FE++ E GL + + K LN
Sbjct: 107 LKDYDGSVAAYKSATKLFEDV------NFEVLRGLTNSLLAAGKPDEAVQFLLDYRDNLN 160
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
V+ K ME K D LL+ + S+A+ VY++L+ P DFR Y
Sbjct: 161 NVKLGEGKEME----TKLSIDPVQVDLLLGKSYSDWGHVSDAVSVYDQLISSHPNDFRGY 216
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
L +GII + +AE+ F + R P N
Sbjct: 217 LAKGIILKENGRSGDAERMFIQARFFAPEN 246
>gi|390571564|ref|ZP_10251803.1| hypothetical protein WQE_24442 [Burkholderia terrae BS001]
gi|389936425|gb|EIM98314.1| hypothetical protein WQE_24442 [Burkholderia terrae BS001]
Length = 520
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE---LEPNEFEWQL 187
Y+E + L+ +P+ E L+ L V K A D R + P +
Sbjct: 21 YDEAAALLHGILSIDPDHSETLEALGYVAAKQGDYTRAADYATRAAQPASTNPQQLH--- 77
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMER 247
A + AG AI FE +L P E+ HG M+ + E E+ +++
Sbjct: 78 FAAHICQLAGRHADAIALFERVLAAYPDHAESLHGAAMSLVAT----GEHERALQRLARL 133
Query: 248 CKKEKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
++ + +++ + L+ Q++ ++ E L Y + + +P R Y+ G+ L
Sbjct: 134 TQRYPQSAEVHYNRGTLLGQME----RYDEELAAYRQAIALKPNFVRAYVNLGVALRDLH 189
Query: 307 KKDEAEKQFEK 317
+ DEA +QF+K
Sbjct: 190 RFDEALQQFKK 200
>gi|388508206|gb|AFK42169.1| unknown [Lotus japonicus]
Length = 215
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
++EAL+ ++ +I+ K EAV ++ LI+LEPNE EW+LL A GE
Sbjct: 138 NVEALKVIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGE 188
>gi|265985184|ref|ZP_06097919.1| TPR repeat-containing protein [Brucella sp. 83/13]
gi|264663776|gb|EEZ34037.1| TPR repeat-containing protein [Brucella sp. 83/13]
Length = 295
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 26/250 (10%)
Query: 102 IAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIK 161
+A VA + ST + + E++S + + +NP D E K
Sbjct: 39 LALTVAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGK 92
Query: 162 SQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
+ + EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY
Sbjct: 93 AGRYKEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYI 152
Query: 222 GLVMAYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSE 276
G Y + D+ LN + I + +D R + + LI Q K + H +
Sbjct: 153 GRGNVYRQAGRLDQALNNFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQ 200
Query: 277 ALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNM 336
A+ + + + PY +GI Y L D A F+ F + + E + +
Sbjct: 201 AIEDFSKAISLNSTAPEPYNGRGISYVALGDFDNA---FDDFNTAITLDQNVAESWANQA 257
Query: 337 VATKIFGEKV 346
+ + G+K
Sbjct: 258 LVYEHNGDKA 267
>gi|110636430|ref|YP_676637.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279111|gb|ABG57297.1| TPR repeat containing protein [Cytophaga hutchinsonii ATCC 33406]
Length = 466
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+EQH P +E + ++V ++ + EA++++DR +PN+ + QLL+A + +
Sbjct: 59 MEQH----PYSVEIMLLKVQVLMQMTQFEEALEILDRAQLYQPNDTDIQLLRANIMAQQD 114
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+ E AI+ EEIL + E ++ + + Y + + E+ I E + D
Sbjct: 115 DFEGAIELLEEILTLAEEKDEIHYHMGVIY----QDMGNFEESINHLKEAIMLNSQHEDA 170
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L ++V++ + E++ +++L++++P + C G+ Y K DEA +E
Sbjct: 171 --IYELSYSLEVLD-RLEESIDFFKQLIEKDPYSHFAWFCLGVSYFKQGKLDEALDAYE 226
>gi|367475911|ref|ZP_09475338.1| conserved exported hypothetical protein, TPR-like motif
[Bradyrhizobium sp. ORS 285]
gi|365271774|emb|CCD87806.1| conserved exported hypothetical protein, TPR-like motif
[Bradyrhizobium sp. ORS 285]
Length = 476
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+PND EA + V + ++L A+ D+ I L+P+ + + G++E A++
Sbjct: 151 DPNDAEAYELRGVVYTEQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLRGDNEKAVQ 210
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK-LL 263
+ E +R DP R + AY KKL +++K + E +++ K + D + L
Sbjct: 211 DYNEAIRLDPDRPRTFTNRAAAY----KKLGQIDKALADDHEAIRRDPKVPEYYDNRGLT 266
Query: 264 IAQIKVMESKHSEALRVYEELVKEEPR 290
A +K ++ +A+ Y++ +K +P+
Sbjct: 267 YAAMK----EYDKAIADYDQAIKLQPK 289
>gi|261216409|ref|ZP_05930690.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
gi|260918016|gb|EEX84877.1| TPR repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
Length = 295
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 26/246 (10%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+ +
Sbjct: 43 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKAGRY 96
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 97 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAMQDYSRAIQLNPQYDAAYIGRGN 156
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 157 VYRQAGHLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 204
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
+ + + PY +GI Y L D A F+ F + + E + + + +
Sbjct: 205 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAITLDQNVAESWANQALVYE 261
Query: 341 IFGEKV 346
G+K
Sbjct: 262 HNGDKA 267
>gi|384210297|ref|YP_005596017.1| hypothetical protein Bint_2843 [Brachyspira intermedia PWS/A]
gi|343387947|gb|AEM23437.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 233
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH-- 221
K EA+ ++ IEL+PN + V++ GE E AIK ++ + D AY+
Sbjct: 28 KYEEAIVYYNKAIELDPNYSAAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNR 87
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
GL Y G + E K +KA+E SD D +K + K+ ++++ +
Sbjct: 88 GLAKDYLG---EYEEAIKDYDKAIEL------DSDYSDAYNNRGIVKNVLGKYEDSIKDF 138
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPY 328
++++ P D Y +G + +L K EA K ++K L P N +
Sbjct: 139 NKVIELNPNDSDAYYNRGTVKDVLGKYGEAIKDYDKAIELNPNNGAF 185
>gi|87310163|ref|ZP_01092295.1| probable PKR inhibitor (translation regulation) [Blastopirellula
marina DSM 3645]
gi|87287153|gb|EAQ79055.1| probable PKR inhibitor (translation regulation) [Blastopirellula
marina DSM 3645]
Length = 556
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 87/174 (50%), Gaps = 7/174 (4%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
++E+ +++Q + NPND+ LQ + +K EA+ ++D+ + P LL+
Sbjct: 205 NFEKASADLKQVMEKNPNDVAVLQAYADTLAGMKKFDEAIALLDKTVAEHPGSPVGYLLR 264
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
A+++ A +SE AI+ +++L P + A Y D+ + E+ +++ +
Sbjct: 265 ARLKVLAEDSEGAIQDLDQVLAFIPRSIPALMMRARLYIDLDRPAD-AEQDLDRIL---- 319
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
+++L D +L + + + K +A++ E L++ +P++ + G+IY
Sbjct: 320 --SIEANLPDAIILRSVVLTQQGKFDQAIKDLETLLQRDPQNESILIQIGMIYN 371
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 16/173 (9%)
Query: 125 AREDVSYEEKE---KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN 181
AR V E+ E ++++Q LA P I AL + I + +A +DR++ +E N
Sbjct: 265 ARLKVLAEDSEGAIQDLDQVLAFIPRSIPALMMRARLYIDLDRPADAEQDLDRILSIEAN 324
Query: 182 EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR--VEAYHGLVMAYDGSDKKLNEV-E 238
+ +L++ V + G+ + AIK E +L++DP + G++ DG +K ++ +
Sbjct: 325 LPDAIILRSVVLTQQGKFDQAIKDLETLLQRDPQNESILIQIGMIYNSDGQPRKAIQIFD 384
Query: 239 KRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRD 291
++K+ + + +S+ AQ+ + E K A+ YE+ +K +P+D
Sbjct: 385 TVLKKSPDSWQALSGRSN--------AQLSIGEQKA--AIEGYEQALKLQPKD 427
>gi|254409523|ref|ZP_05023304.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196183520|gb|EDX78503.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 385
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 7/168 (4%)
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
IK+ EAV D+ IE+ + + + + A+ F + DP V A
Sbjct: 67 IKAGNYAEAVKAYDQAIEINGESADAWMGRGFALYGLEKYPEAVTAFNQATELDPSLVGA 126
Query: 220 YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALR 279
+ GL MA D + K + + A ++ K SD F I ++ + EAL
Sbjct: 127 WVGLGMALDDTGKPEDAL-----AAYDQALKVNPNSDWAWFHRGITLGRL--ERDQEALE 179
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP 327
Y++ V+ +P R + +G I L + EAE F + R+ P + P
Sbjct: 180 AYDQAVRIDPDYERAWFNRGYILVELERYPEAETSFAEVVRINPNSEP 227
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 198 ESEAAIKGFEEILRKDPLRVEAYH--GLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
++ A+K FE +L +P A++ G+++ DG D + V R+ + +
Sbjct: 241 QNNTALKAFERVLLINPENANAWYNKGIILENLDGDDWAIFTVFDRVVQLIPDDAGGW-- 298
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
FK A +++ ++++AL Y+ +++ EP + +GI LL + +A
Sbjct: 299 -----FKRGNALLRL--DRYADALNSYDRMLELEPDSEVGWYNRGIALALLERYHDAIAS 351
Query: 315 FEKFRRLVPRNHPYREY 331
F++ R+ P N +E+
Sbjct: 352 FDEALRINPNNTEAKEH 368
>gi|423014772|ref|ZP_17005493.1| cellulose synthase protein C [Achromobacter xylosoxidans AXX-A]
gi|338782388|gb|EGP46763.1| cellulose synthase protein C [Achromobacter xylosoxidans AXX-A]
Length = 1314
Score = 47.0 bits (110), Expect = 0.014, Method: Composition-based stats.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 26/214 (12%)
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE---------- 184
E ++ L+A PND +AL L VR++ + EA +++ R P
Sbjct: 291 EAAFQEKLSATPNDPDALGGLGLVRMQQDRNAEAQELLSRAAA-RPGAGRNWTRALAGVR 349
Query: 185 -WQLL-KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
W LL +A+ G+S+ A K E+ +R D AY+ + AY S + EK
Sbjct: 350 YWNLLDQAEAARQRGDSDGARKLLEQAIRLDGSATGAYNAIGRAY-ASGGDMANAEKTYR 408
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRD---FRPYLCQG 299
+ R K + + +R ++AQ + EALR+ + L + D R + G
Sbjct: 409 YVLARHKNDPEA--VRGLADVLAQT----GRAEEALRLVDALPAGQAGDVSRLRAAVMAG 462
Query: 300 IIYTLLRKKDE--AEKQFEKFRRLVPRNHPYREY 331
++ D A + E RR PRN P+ Y
Sbjct: 463 QAREAEKRGDTAGARRMLEDARRTDPRN-PWTTY 495
>gi|254788153|ref|YP_003075582.1| hypothetical protein TERTU_4325 [Teredinibacter turnerae T7901]
gi|237686893|gb|ACR14157.1| tetratricopeptide repeat domain protein [Teredinibacter turnerae
T7901]
Length = 791
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 47/79 (59%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P+ + ++ L++ IK+ + EA ++R+I +PN + L+ + Y GE+E A++
Sbjct: 531 SPDSMRSMVLLVDAYIKAGQRDEAETFLNRVIATDPNSYTGYFLRGNLHLYFGEAEPAVR 590
Query: 205 GFEEILRKDPLRVEAYHGL 223
+++ ++ DP + AY+ L
Sbjct: 591 DYQQAIKNDPKKEGAYNAL 609
>gi|421597100|ref|ZP_16040780.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
gi|404270790|gb|EJZ34790.1| hypothetical protein BCCGELA001_07294 [Bradyrhizobium sp.
CCGE-LA001]
Length = 452
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P D EA + V ++L A+ D+ I+L+P++ + + G++E A+K
Sbjct: 128 DPKDAEAYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVAYYLGGDNEKAVK 187
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
F+E LR DP R Y AY KKL ++ K + E + + + + D + L
Sbjct: 188 NFDEALRLDPNRARTYTNRGAAY----KKLGQLNKAVADDGEAIRLDPRVPEYYDNRGL- 242
Query: 265 AQIKVMESKHSEALRVYEELVKEEPR 290
++ +A+ Y++ ++ E R
Sbjct: 243 --TYAAMGEYDKAIADYDQAIRREQR 266
>gi|126327367|ref|XP_001366386.1| PREDICTED: intraflagellar transport protein 88 homolog [Monodelphis
domestica]
Length = 825
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIKYFERAALIQPTQVKWQLMVASCYRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKEIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 730
>gi|294853920|ref|ZP_06794592.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
gi|294819575|gb|EFG36575.1| hypothetical protein BAZG_02903 [Brucella sp. NVSL 07-0026]
Length = 315
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 26/222 (11%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKL 165
VA + ST + + E++S + + +NP D E K+ +
Sbjct: 63 VAGCQSTNSTLSTVDRAQGSSENIS------SLTSVIQSNPRDPEGYNVRGSAYGKAGRY 116
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ D+ I L PN ++ +A V Y G++ A++ + ++ +P AY G
Sbjct: 117 KEAMRDFDQAIALNPNFYQAYANRALVDRYMGDNNKAVQDYSRAIQLNPQYDAAYIGRGN 176
Query: 226 AYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRV 280
Y + D+ LN+ + I + +D R + + LI Q K + H +A+
Sbjct: 177 VYRQAGHLDQALNDFNQAI---------ALRTTDGRAYHNRGLIYQAKGL---HKQAIED 224
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
+ + + PY +GI Y L D A F+ F +
Sbjct: 225 FSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDDFNTAI 263
>gi|386812651|ref|ZP_10099876.1| peptidase [planctomycete KSU-1]
gi|386404921|dbj|GAB62757.1| peptidase [planctomycete KSU-1]
Length = 619
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 17/185 (9%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E + +Q + NP+D +A L K EA+DV ++I +P++ L
Sbjct: 387 YSEAIEAYQQVITINPHDTKAHIMLGSAYSKQGCYTEAIDVFKKVIYSKPDDTHAYFLLG 446
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
G AI +++ + P Y+ L M Y+ ++E++ E
Sbjct: 447 VAYEKLGSYTEAIDAYKQAISIKPDDAGMYYNLGMTYE-----------KLERSGEAIDA 495
Query: 251 EK-----KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
K K D R +++L + +H EA+ VY+ + P D Y ++Y +L
Sbjct: 496 YKQAIYLKPDDTRAYRML-GMVYAKLKRHVEAIDVYKLAINIRPDDADIYYRLALMYNIL 554
Query: 306 RKKDE 310
+ E
Sbjct: 555 NRYGE 559
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 81/181 (44%), Gaps = 7/181 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E ++ + + P+ +EA +L V EA++ ++I + P++ + ++
Sbjct: 353 YPEAIHAFKKAIDSKPDFVEAYSSLGLVCFNLGYYSEAIEAYQQVITINPHDTKAHIMLG 412
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
S G AI F++++ P AY L +AY+ KL + I+ +
Sbjct: 413 SAYSKQGCYTEAIDVFKKVIYSKPDDTHAYFLLGVAYE----KLGSYTEAIDAYKQAISI 468
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ + + + L + K+ S EA+ Y++ + +P D R Y G++Y L++ E
Sbjct: 469 KPDDAGMY-YNLGMTYEKLERS--GEAIDAYKQAIYLKPDDTRAYRMLGMVYAKLKRHVE 525
Query: 311 A 311
A
Sbjct: 526 A 526
>gi|17229291|ref|NP_485839.1| hypothetical protein alr1799 [Nostoc sp. PCC 7120]
gi|17130889|dbj|BAB73498.1| alr1799 [Nostoc sp. PCC 7120]
Length = 402
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN--EFEWQLL 188
++ E Q L PN A L + + +L AV I L PN E + L
Sbjct: 99 WQGAENAFRQALQREPNLAMARAYLGNIYLMQNRLDVAVQEYGEAIRLNPNLGETYYNLG 158
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAME 246
A Q G+ E AI + + L DP RVEAY+ GLV+ G +++ I +
Sbjct: 159 LALQQQ--GKKEGAITAYRQALVIDPRRVEAYYNLGLVLYEQGL------LQEAIAAYQD 210
Query: 247 RCKKEKKKSDL-RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
E K + + + + Q ME EA+ Y E++K +P++ Y G + +
Sbjct: 211 AVNLEPSKINAHHNLAIALQQTGKME----EAIVAYREVLKLDPKNAAAYSSLGSLMAMQ 266
Query: 306 RKKDEAEKQFEKFRRLVPRN 325
+ +EA + + R P+N
Sbjct: 267 GRPEEAIAAYTQAVRQDPKN 286
>gi|186685791|ref|YP_001868987.1| hypothetical protein Npun_F5744 [Nostoc punctiforme PCC 73102]
gi|186468243|gb|ACC84044.1| TPR repeat-containing protein [Nostoc punctiforme PCC 73102]
Length = 280
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 9/182 (4%)
Query: 45 FSCIRASSSPASQQNPKPSLLRTLTPLSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAA 104
F+ + A SS + +N S+L T +S+P + S T + +++ + + A
Sbjct: 22 FTTLTAISSVSCSKND--SVLVTEIGVSTPSRR--SATASRGGEFYLQGKNQHLNGDLQA 77
Query: 105 PVAAAATVESTNESTKDTTSAREDVSYE--EKEKEI---EQHLAANPNDIEALQTLMEVR 159
+A+ + S N + R ++ +KEK I Q L NPND EA L R
Sbjct: 78 AIASYSKAISQNSQYGAAYNGRGLAYFDLGDKEKAIADYNQALRINPNDAEAYNNLGNAR 137
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
+ EAV I L PN E + ++ G+ + AI + +R +P A
Sbjct: 138 ASLEGNREAVKDYSEAIRLNPNYAEAYNNRGNARAANGDRKGAIDDLGQAIRLNPRYAIA 197
Query: 220 YH 221
Y+
Sbjct: 198 YN 199
>gi|365890554|ref|ZP_09429068.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
gi|365333560|emb|CCE01599.1| conserved exported hypothetical protein [Bradyrhizobium sp. STM
3809]
Length = 453
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
++ + +PND EA + V + +L A+ D+ I L+P+ + +
Sbjct: 120 DLSMAITLDPNDAEAYELRGVVYTEQHRLDRALADYDQAIRLKPDYAQAYADRGVAFYLR 179
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
G++E A++ ++E +R DP R + AY KKL +++K + E +++ K +
Sbjct: 180 GDNEKAVQDYDEAIRLDPDRPRTFTNRAAAY----KKLGQIDKALADDHEAIRRDPKVPE 235
Query: 257 LRDFK-LLIAQIKVMESKHSEALRVYEELVKEEPR 290
D + L A +K ++ +A+ Y++ +K +P+
Sbjct: 236 YFDNRGLTYAAMK----EYDKAIADYDQAIKLQPK 266
>gi|393795229|ref|ZP_10378593.1| hypothetical protein CNitlB_02498 [Candidatus Nitrosoarchaeum
limnia BG20]
Length = 600
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +PN+I+A + ++ + ++ + EA+ ++++E+ PN E LL Q++ ++
Sbjct: 230 LEVSPNNIDAHLLVGKINMNAKIINEALAHFEKVLEISPNNIETHLLLGQIKMDVNNTDE 289
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK--RIEKAMERCKKEKKKSDLRD 259
A+ FE++L P + DG + K+ +EK ++++A+E C E+ + L D
Sbjct: 290 ALAHFEKVLEISPNHM----------DGLNSKIILLEKLGKVDEAIEYC--ERFAASLPD 337
Query: 260 --FKLLIAQIKVMESKH-SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+LL I + + SEAL + +++ + + L + I+TL ++ EA
Sbjct: 338 PTEQLLKKGILLFNNNRISEALVCFNDILGKSNNNNVALLYKAKIFTLKQEFQEA 392
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 5/114 (4%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E +I + + +N + +E+L L ++ IK+ + + +++L+E+ PN + LL ++
Sbjct: 187 ENAVKILESIVSNNDHLESLLLLGQIAIKNSNSHKGLSYLNKLLEVSPNNIDAHLLVGKI 246
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLV----MAYDGSDKKLNEVEKRIE 242
A A+ FE++L P +E H L+ M + +D+ L EK +E
Sbjct: 247 NMNAKIINEALAHFEKVLEISPNNIET-HLLLGQIKMDVNNTDEALAHFEKVLE 299
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 90/203 (44%), Gaps = 23/203 (11%)
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE--WQLLKAQVQSYAGESEAAIKGFE 207
EA ++ + Q + EA++ +++LEP E + L K+ V+S +E A+K E
Sbjct: 137 EAFLMKGKILLSKQNIPEAINQFYHVLDLEPENIEAKFYLGKSLVES--NRTENAVKILE 194
Query: 208 EIL-RKDPLRVEAYHG-LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA 265
I+ D L G + + S K L+ + K +E + D LL+
Sbjct: 195 SIVSNNDHLESLLLLGQIAIKNSNSHKGLSYLNKLLEVSPNNI----------DAHLLVG 244
Query: 266 QIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+I + +EAL +E++++ P + +L G I + DEA FEK + P N
Sbjct: 245 KINMNAKIINEALAHFEKVLEISPNNIETHLLLGQIKMDVNNTDEALAHFEKVLEISP-N 303
Query: 326 HPYREYFVDNMVATKIFGEKVDR 348
H +D + + I EK+ +
Sbjct: 304 H------MDGLNSKIILLEKLGK 320
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 15/216 (6%)
Query: 115 TNESTKDTTSAREDVS---YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
T++ T D A ++ + E K E L NP AL +L +A++
Sbjct: 65 TDDFTDDLNLANYFLACKKFTESLKYYESALVKNPQSYSALCNKGLCLYNLSQLDDAIEC 124
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLVMAYDG 229
D ++ N E L+K ++ AI F +L +P +EA Y G
Sbjct: 125 YDEALKTYHNIPEAFLMKGKILLSKQNIPEAINQFYHVLDLEPENIEAKFYLG------- 177
Query: 230 SDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
K L E R E A++ + +D + LL+ QI + S + L +L++ P
Sbjct: 178 --KSLVE-SNRTENAVKILESIVSNNDHLESLLLLGQIAIKNSNSHKGLSYLNKLLEVSP 234
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ +L G I + +EA FEK + P N
Sbjct: 235 NNIDAHLLVGKINMNAKIINEALAHFEKVLEISPNN 270
>gi|330507524|ref|YP_004383952.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328928332|gb|AEB68134.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 259
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 15/244 (6%)
Query: 94 PFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQ 153
PF +A P A E TK S + SY +I+Q+L N +D A
Sbjct: 6 PFLLAILMLAIPAAMGQDAEHWIAKTK---SDYYNGSYPLALDDIDQYLKINQSDTWAWS 62
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA-GESEAAIKGFEEILRK 212
+ +K ++ EA++ DR+I L+ + + +A V S + E A+ E L+
Sbjct: 63 FRANLLLKMERYEEALESFDRIISLDQSNAKAYNDRALVLSGGLNQDEEALASLEAALQI 122
Query: 213 DPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVM 270
D L A++ G+V+ ++ NE + KA++ + + LLI Q
Sbjct: 123 DALNANAWYNKGMVLE---KMERYNESLEAYRKAIDLDGDLDRAWYRQGHVLLIVQ---- 175
Query: 271 ESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE 330
+ E+L ++ V+ P + + +G++ L + +EA F++ +L P N YRE
Sbjct: 176 --RFDESLASLDKAVEFNPENAEAWNDKGVVLRKLERNEEALDCFQRAIQLDPSNELYRE 233
Query: 331 YFVD 334
D
Sbjct: 234 NLND 237
>gi|407456229|ref|YP_006734802.1| penicillin binding transpeptidase domain-containing protein
[Chlamydia psittaci VS225]
gi|405783490|gb|AFS22237.1| penicillin binding transpeptidase domain protein [Chlamydia psittaci
VS225]
Length = 1448
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + K EA++ D+++EL+P + KA
Sbjct: 1207 EEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKILELDPWNPQSLYNKAV 1266
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + + AI E +RK+PL +A+ + + Y L K+ +KA E ++
Sbjct: 1267 VLTDMNNEQEAIALLETTVRKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 1318
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + DL D + + K AL+ ++E + EE D Y+ G+ Y L++
Sbjct: 1319 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAYMDLKQN 1376
Query: 309 DEAEKQFEK 317
+A F +
Sbjct: 1377 RQASDAFHR 1385
>gi|386398767|ref|ZP_10083545.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
gi|385739393|gb|EIG59589.1| tetratricopeptide repeat protein,tetratricopeptide repeat protein
[Bradyrhizobium sp. WSM1253]
Length = 461
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 43/239 (17%)
Query: 117 ESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLI 176
E+ D A D+S K IE NP D E+ + V ++L A+ D+ I
Sbjct: 118 EAGGDLNRAAADLS-----KAIEL----NPQDSESYELRGVVYTNQRRLDRALADYDQAI 168
Query: 177 ELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE 236
+L+P+ + + G++E AI+ E LR DP R +Y AY KKL +
Sbjct: 169 KLKPDNAQAWSDRGVTYYLGGDNENAIRDLSEALRLDPNRPRSYTNRGAAY----KKLGQ 224
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLL----IAQIKVMESKHSEALRV------------ 280
+E+ + E + + K + D + L + + + + +ALR+
Sbjct: 225 LERSVADDGEAIRLDPKVPEYYDNRGLSLAAMGEYDKAIADYDQALRLAPRPNFFANRGD 284
Query: 281 --------------YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
YE +K EP + Y + ++Y + ++ +A +E RL P N
Sbjct: 285 SYHLKGELGAALSDYEAALKLEPNFAQTYNNRAVLYKKMGERKKALADYETALRLDPGN 343
>gi|384215071|ref|YP_005606236.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
gi|354953969|dbj|BAL06648.1| hypothetical protein BJ6T_13600 [Bradyrhizobium japonicum USDA 6]
Length = 461
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 117 ESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLI 176
E+ D A D+S K IE +P D EA + V ++L A+ D+ I
Sbjct: 118 EAGGDLNRAAADLS-----KAIEL----DPQDAEAYELRGVVYTNQRRLDRALADYDQAI 168
Query: 177 ELEPNEFE-WQLLKAQVQSY-AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKL 234
+L+P++ + W V Y G++E AI+ E LR DP R AY AY KKL
Sbjct: 169 KLKPDDAQAWS--DRGVNYYLGGDNEKAIRDLSEALRLDPNRPRAYTNRGAAY----KKL 222
Query: 235 NEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR 290
+++K + E + + K + D + L+ + M ++ +A+ Y++ ++ PR
Sbjct: 223 GQLDKAVADDGEAIRLDPKVPEYYDNRGLV--LAAM-GEYDKAIADYDQALRLAPR 275
>gi|333987462|ref|YP_004520069.1| hypothetical protein MSWAN_1251 [Methanobacterium sp. SWAN-1]
gi|333825606|gb|AEG18268.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 1161
Score = 46.6 bits (109), Expect = 0.020, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 22/173 (12%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH- 221
+K+ EA+ D I+ +PN + K + + E + AIK F++ L+ DP E ++
Sbjct: 72 KKIDEAIKCYDNAIKTDPNYSKALNNKGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNN 131
Query: 222 -GLVMAYDGSDKKLNEVEKRIEKAMERCKKE-----KKKSDLRDFKLLIAQIKVMESKHS 275
GL + Y G + E K KA+ K K LR+ K ++
Sbjct: 132 KGLALGYLG---RYEEAIKSFNKAINYEPKNIIFLYNKGELLRNLK-----------RYE 177
Query: 276 EALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPY 328
EA+ Y+ ++ + F L +GI L K DE+ + F+K L P N P+
Sbjct: 178 EAIESYDRIINIKNDFFDAILNKGISLAHLEKYDESIEYFDKLIELNP-NSPF 229
Score = 38.1 bits (87), Expect = 7.2, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 91/222 (40%), Gaps = 30/222 (13%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E K + + +PN +AL + K + +A+ D+ ++++P+ E K
Sbjct: 75 DEAIKCYDNAIKTDPNYSKALNNKGTLLTKISEYDKAIKCFDKALKIDPDYAEVHNNKGL 134
Query: 192 VQSYAGESEAAIKGFEEILRKDP------------LR-VEAYHGLVMAYDGSDKKLNE-V 237
Y G E AIK F + + +P LR ++ Y + +YD N+
Sbjct: 135 ALGYLGRYEEAIKSFNKAINYEPKNIIFLYNKGELLRNLKRYEEAIESYDRIINIKNDFF 194
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQ------IKVMES----------KHSEALRVY 281
+ + K + EK + F LI I ++ S ++ EA++
Sbjct: 195 DAILNKGISLAHLEKYDESIEYFDKLIELNPNSPFIHIVYSNKGLSLGNLERYEEAIKYL 254
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
++ ++ + + +G+I+ L K DEA + +EK + P
Sbjct: 255 DKSIELNSENAEAWFNKGVIFETLGKYDEAIEYYEKALEIAP 296
>gi|150397952|ref|YP_001328419.1| hypothetical protein Smed_2754 [Sinorhizobium medicae WSM419]
gi|150029467|gb|ABR61584.1| TPR repeat-containing protein [Sinorhizobium medicae WSM419]
Length = 295
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 20/210 (9%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
+A+NP D E ++ + AV D+ I+L P ++ +A VQ G +A
Sbjct: 71 IASNPGDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALVQRNLGNQQA 130
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGS---DKKLNEVEKRIEKAMERCKKEKKKSDLR 258
A+ + L+ +P AY G Y + D N+ K I E +D R
Sbjct: 131 ALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAI---------ELDTADPR 181
Query: 259 DF--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
+ + LI Q + ++H +A+ + + + P PY +GI Y D A F
Sbjct: 182 AYHNRGLIYQAR---NQHVQAIEDFSKAISLSPSSPEPYNGRGISYVAQGDDDNA---FS 235
Query: 317 KFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
F + N E + + + + G+K
Sbjct: 236 DFNTAINLNGKLAESWANQALVYERRGDKA 265
>gi|149924324|ref|ZP_01912693.1| TPR repeat [Plesiocystis pacifica SIR-1]
gi|149814807|gb|EDM74376.1| TPR repeat [Plesiocystis pacifica SIR-1]
Length = 352
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL---V 224
A D D+ ++ +P++ E Q A++ GE E AI GF ++LR DP EA++GL +
Sbjct: 243 ARDCFDQALQHDPDQPEAQCNLAELALRDGELELAIAGFRQVLRVDPDNYEAHYGLARGL 302
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
M G + L +E R A++R E+ DL
Sbjct: 303 MEVGGKAQALAHLE-RFCGAIDRLPDEEATDDL 334
>gi|119487888|ref|ZP_01621385.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
gi|119455464|gb|EAW36602.1| O-linked GlcNAc transferase [Lyngbya sp. PCC 8106]
Length = 614
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 9/194 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E + + LA PND EA + K ++ EA+ D+ +E++PN++E +
Sbjct: 342 YSEALESYDHALAIQPNDDEAWHNRGALLRKFKRYDEALTSYDKALEIQPNKYETWHNRG 401
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
V E AI ++ + D + E + +A KL E+ I +
Sbjct: 402 NVLGKLKRYEEAIISYDRAITIDAGKREVWLNRAVAL----CKLKRYEQAIASFEQAIGL 457
Query: 251 EKKKSDLRDFKL-LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ +L + + L+ Q+ ++SEA+ +E ++ +P + +L +G + L++
Sbjct: 458 DPTSPELWNMRASLLHQL----GRYSEAIDSFENAIEHQPNCYEAWLGKGSVLVQLKQYS 513
Query: 310 EAEKQFEKFRRLVP 323
EA + +EK + P
Sbjct: 514 EALETYEKAITIQP 527
>gi|212722444|ref|NP_001131647.1| uncharacterized protein LOC100193007 [Zea mays]
gi|194692148|gb|ACF80158.1| unknown [Zea mays]
gi|195626406|gb|ACG35033.1| hypothetical protein [Zea mays]
gi|414884257|tpg|DAA60271.1| TPA: hypothetical protein ZEAMMB73_377977 [Zea mays]
Length = 414
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 55/279 (19%)
Query: 79 TSVTVAAAALLFMR-------LPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSY 131
T V + A ++F LP+ S+ P +K++ ++ +S
Sbjct: 144 TRVGIGVAVVIFGLVFAFGDFLPYGSVSP------------------SKESAVVKQKLSQ 185
Query: 132 EEKEK------EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE- 184
EE+EK + L+ +PND AL+ + + +A +++LI++ P++ E
Sbjct: 186 EEEEKFKNALQGFQATLSKSPNDPTALEGAAVSLSELGEYEKASTFLEKLIKVIPDKAEA 245
Query: 185 WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK--------- 232
++LL K +++ Y G S + + D + E GL + + K
Sbjct: 246 YRLLGEVKFELKDYEGSSSSYRS---ALSSSDNIDFEVLRGLTNSLLAAKKPDEAVDIIL 302
Query: 233 ----KLNEVEKR----IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
KLNE + +E + +++ + D LL+ + S+A+ VY++L
Sbjct: 303 LCRRKLNEKSQTGLADLEATNDNGRQKPQDIDPIQVDLLLGKAYSDWGHISDAISVYDKL 362
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ + P DFR YL +GII K +AE+ F + + P
Sbjct: 363 ITDHPEDFRGYLAKGIILKENGKAGDAERMFIQAKFFAP 401
>gi|23006671|ref|ZP_00048884.1| COG0457: FOG: TPR repeat [Magnetospirillum magnetotacticum MS-1]
Length = 259
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 80/208 (38%), Gaps = 27/208 (12%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP+D A T ++ + EA+ + I+L+P +A G ++AA++
Sbjct: 37 NPSDAGAYNTRGAAYARAGQFGEAISDFSKAIQLDPGSASAYNNRALAYRQTGRNDAAMQ 96
Query: 205 GFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIE-----------KAMERCKK 250
F + + DP AY G L A D LN++ I + + R K+
Sbjct: 97 DFSKAISSDPNFSAAYIGRANLERAQGDLDGALNDLNVAIRLAPESAEAYHARGLVRQKQ 156
Query: 251 EKKKSDLRDFKLLI-------------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
+ DF I Q + ++ +A+ + + +D +
Sbjct: 157 GHNAEAVGDFAAAIDRNPFVAAPYAARGQSLISMGQYDKAIEDFNAALNVNAKDASSWAY 216
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+G+ Y ++ EA + +++ RL P N
Sbjct: 217 RGLAYEKANRRKEASESYQQAARLDPNN 244
>gi|253681741|ref|ZP_04862538.1| conserved protein, tetratricopeptide repeat family protein
[Clostridium botulinum D str. 1873]
gi|253561453|gb|EES90905.1| conserved protein, tetratricopeptide repeat family protein
[Clostridium botulinum D str. 1873]
Length = 308
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE---KK 253
GE +AIK ++EIL +P AY+GL + YD ++ E A+E KK
Sbjct: 58 GEYISAIKKYKEILNINPNDERAYYGLAIIYDNKEE--------YEIAIEYYKKAITINP 109
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
K + F L A V K EA++ Y+E++ + +DF L G IY L K + A +
Sbjct: 110 KYNRAYFFLAGAYDAV--GKKEEAIKCYKEVLNMDKKDFWANLNLGSIYEELNKNELAIE 167
Query: 314 QFEKFRRLVPRNH 326
F+K + P N+
Sbjct: 168 FFDKSISIDPYNY 180
>gi|302812259|ref|XP_002987817.1| hypothetical protein SELMODRAFT_447134 [Selaginella moellendorffii]
gi|300144436|gb|EFJ11120.1| hypothetical protein SELMODRAFT_447134 [Selaginella moellendorffii]
Length = 667
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
++ L A + DR++ ++P W + QV+ A E A+ F+E +R+ P AY
Sbjct: 215 RATSLDRACRIFDRIVAMDPARTAWLEGRGQVRVDAKRFEEAVADFDEAIRRQPGNYRAY 274
Query: 221 HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES--KHSEAL 278
G +A++G + N V E A++R + + RD ++ ++ + S ++ EAL
Sbjct: 275 SGRALAFEGLAQWSNAVADYTE-ALQRG---RAATGYRDPYVMNSRGNALASLGRYKEAL 330
Query: 279 RVY 281
R Y
Sbjct: 331 RDY 333
>gi|118385554|ref|XP_001025906.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89307673|gb|EAS05661.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1032
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E K ++ L NP + L L EA+ + +E+ P +
Sbjct: 423 DEAIKSYQKCLEINPKNDSCFYNLGNAYDDKGLLDEAIKSYQKCLEINPKDDICYYNLGN 482
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
Q G + AIK +++ + +P + Y+GL AY K+ V++ I K+ ++C +
Sbjct: 483 TQKEKGLLDEAIKSYQKSIEINPKDDDYYNGLGSAY----KEKGLVDEAI-KSYQKCLEI 537
Query: 252 KKKSDLRDFKLLIAQIKVMESKH--SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
K D+ ++ L A + K EA++ Y++ ++ P++ Y GI Y L D
Sbjct: 538 NPKDDIYNYNLGNA----YDDKGLLDEAIKSYQKSIEINPKNDSCYYNLGIAYKLKGLLD 593
Query: 310 EAEKQFEKFRRLVPRN 325
EA K ++K + P+N
Sbjct: 594 EAIKSYQKCLEINPKN 609
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 11/196 (5%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K ++ L NP D L + + L EA+ + IE+ P + ++ +Y
Sbjct: 359 KSYQKCLEINPKDDICYYNLGKAYKEKDLLDEAIKSYQKSIEINPKDDDY--YNGLGSAY 416
Query: 196 AGES--EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
+S + AIK +++ L +P ++ L AYD DK L +++ I K+ ++C +
Sbjct: 417 RAKSLLDEAIKSYQKCLEINPKNDSCFYNLGNAYD--DKGL--LDEAI-KSYQKCLEINP 471
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
K D+ + L + + EA++ Y++ ++ P+D Y G Y DEA K
Sbjct: 472 KDDICYYNL--GNTQKEKGLLDEAIKSYQKSIEINPKDDDYYNGLGSAYKEKGLVDEAIK 529
Query: 314 QFEKFRRLVPRNHPYR 329
++K + P++ Y
Sbjct: 530 SYQKCLEINPKDDIYN 545
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E K ++ L NP D L + + L EA+ + IE+ P + ++
Sbjct: 457 DEAIKSYQKCLEINPKDDICYYNLGNTQKEKGLLDEAIKSYQKSIEINPKDDDYYNGLGS 516
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKL-NEVEKRIEKAMERCKK 250
G + AIK +++ L +P + L AYD DK L +E K +K++E
Sbjct: 517 AYKEKGLVDEAIKSYQKCLEINPKDDIYNYNLGNAYD--DKGLLDEAIKSYQKSIEI--- 571
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
K+D + L IA ++ EA++ Y++ ++ P++ Y GI Y DE
Sbjct: 572 -NPKNDSCYYNLGIAY--KLKGLLDEAIKSYQKCLEINPKNDSCYYNLGIAYKEKGLLDE 628
Query: 311 AEKQFEKFRRLVPRNHPY 328
A K ++K + P + Y
Sbjct: 629 AIKSYQKSIEINPNDDDY 646
>gi|188581172|ref|YP_001924617.1| hypothetical protein Mpop_1919 [Methylobacterium populi BJ001]
gi|179344670|gb|ACB80082.1| Tetratricopeptide TPR_2 repeat protein [Methylobacterium populi
BJ001]
Length = 286
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 27/208 (12%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP+D A T +S + EA+ + I+L+PN +A G ++AA++
Sbjct: 64 NPSDAGAYVTRGAAYARSGQFGEAISDFSKAIQLDPNSASAYNNRALAYRQTGRNDAAMQ 123
Query: 205 GFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIE-----------KAMERCKK 250
F + + DP AY G L A + LN++ I + + R K+
Sbjct: 124 DFSKAIATDPNFSAAYIGRANLERAQGDLNGALNDLNVAIRLAPESAEAYHARGLVRQKQ 183
Query: 251 EKKKSDLRDFKLLI-------------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
+ + DF I Q + +++ +A+ + + +D +
Sbjct: 184 GQNPEAIGDFAAAIDRNPFVAAPYAARGQSLISLNQYDKAIEDFNAALNVNSKDASSWAY 243
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+G+ Y ++ EA + +++ RL P N
Sbjct: 244 RGLAYEKTNRRKEANESYQQAARLDPNN 271
>gi|403739707|ref|ZP_10952043.1| hypothetical protein AUCHE_17_00230 [Austwickia chelonae NBRC
105200]
gi|403190450|dbj|GAB78813.1| hypothetical protein AUCHE_17_00230 [Austwickia chelonae NBRC
105200]
Length = 349
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 112 VESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
V +T K T+S R E K KE+ + A+P D+ AL+ L + + + +A +
Sbjct: 169 VSNTASPAKPTSSVRP--VDESKVKELTEKTKADPKDVTALRGLTDQYYGAGEFAKAAEW 226
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
++++++P + +L+ A + +G++ A + +++ DP +VEAY+ L
Sbjct: 227 QQKVVDIQPADISSRLVLAACLANSGDATRAETEWTKVIELDPTQVEAYYNL 278
>gi|428213315|ref|YP_007086459.1| tetratricopeptide repeat protein,protein kinase family protein
[Oscillatoria acuminata PCC 6304]
gi|428001696|gb|AFY82539.1| tetratricopeptide repeat protein,protein kinase family protein
[Oscillatoria acuminata PCC 6304]
Length = 1046
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 128 DVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL 187
D ++E ++ LA NP+D+ A + + Q++ EA+ DR +E+ P+ +
Sbjct: 805 DRAFERALAAYDRLLANNPDDLNAWLERGRLLNQLQRVDEAIASFDRALEINPDFYLAWN 864
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEK-----R 240
K A + ++ +++ L +P + +H G++++ G + VE
Sbjct: 865 AKGTTLYSASQFAEGLEAYDQALAIEPDFYKGWHNRGVLLSL-GLGRHFEAVEAFDRALA 923
Query: 241 IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGI 300
IE + +++ +AQ+++ ++ EA+ +++ VK EPRD R + +GI
Sbjct: 924 IEASFHPAWRDRG----------LAQMEL--RRYPEAVTSFDQAVKFEPRDGRSWANRGI 971
Query: 301 IYTLLRKKDEAEKQFEK 317
LR+ +A + F++
Sbjct: 972 ALNELRRYSDAIESFDQ 988
>gi|424824746|ref|ZP_18249733.1| hypothetical protein CAB1_0055 [Chlamydophila abortus LLG]
gi|333409845|gb|EGK68832.1| hypothetical protein CAB1_0055 [Chlamydophila abortus LLG]
Length = 335
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 9/187 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + K EA++ D+++EL+P + KA
Sbjct: 94 EEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKILELDPWNPQSLYNKAV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + + AI E +RK+PL +A+ + + Y L K+ +KA E ++
Sbjct: 154 VLTDMNNEQEAIALLETTVRKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 205
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ + DL D + + K AL+ ++E + D Y G+ Y L++ +
Sbjct: 206 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAYFYVGLAYMDLKQNRQ 265
Query: 311 AEKQFEK 317
A F +
Sbjct: 266 ASDAFHR 272
>gi|386002402|ref|YP_005920701.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
gi|357210458|gb|AET65078.1| Tetratricopeptide repeat family [Methanosaeta harundinacea 6Ac]
Length = 1348
Score = 46.2 bits (108), Expect = 0.025, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 158 VRIKSQ-KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +KSQ K EA+ + I L+P K + G+ + AI+ F+E +R +P
Sbjct: 374 LSLKSQGKYDEAIQTFNETIRLDPEHVAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEY 433
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSE 276
V+A++ A D + ++ I+ E K + +D + K + +++E
Sbjct: 434 VDAWYSKGNALDSQSR----YDEAIQAYDEVIKLNPEYADAWNSK---GTAFNSQGRYNE 486
Query: 277 ALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
A++ ++E ++ P + +G+ L K +EA + F++ RL P +
Sbjct: 487 AIKAFDEAIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPED 535
Score = 44.3 bits (103), Expect = 0.094, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 7/194 (3%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+Y+E K + + +P + + + K A+ D I L P + + K
Sbjct: 177 NYDEAIKAYNEAIRLDPEFMWPWRNKGDTLFSQGKYELAIYAYDEAIRLNPEDLNSWINK 236
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
G+ + AI+ E +R DP V A+H +A + S K +E + ++A+ R
Sbjct: 237 GAALYRLGKYDEAIRASNEAIRLDPENVYAWHNKGVALN-SQGKYDEAIQAYDEAI-RLS 294
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
E + R + L+ Q K+ EA++ E + +P + + +G+ K D
Sbjct: 295 PEYADAWNRKGEALLHQ-----GKYDEAIQASNEAISLDPENANGWNIKGVALYNRGKSD 349
Query: 310 EAEKQFEKFRRLVP 323
EA K +++ RL P
Sbjct: 350 EAIKAYDEAIRLSP 363
Score = 39.3 bits (90), Expect = 2.6, Method: Composition-based stats.
Identities = 50/235 (21%), Positives = 95/235 (40%), Gaps = 30/235 (12%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E + ++ + +P +A E + K EA+ + I L+P +K
Sbjct: 280 YDEAIQAYDEAIRLSPEYADAWNRKGEALLHQGKYDEAIQASNEAISLDPENANGWNIKG 339
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVM----AYDGSDKKLNE-------- 236
G+S+ AIK ++E +R P +A++ GL + YD + + NE
Sbjct: 340 VALYNRGKSDEAIKAYDEAIRLSPEYADAWNNKGLSLKSQGKYDEAIQTFNETIRLDPEH 399
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLI-------------AQIKVMESKHSEALRVYEE 283
V K + + K ++ F I +S++ EA++ Y+E
Sbjct: 400 VAAWYNKGLTLNNQGKYDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDE 459
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVA 338
++K P + +G + + +EA K F++ R RN Y + + + VA
Sbjct: 460 VIKLNPEYADAWNSKGTAFNSQGRYNEAIKAFDEAIR---RNPEYADAWNNKGVA 511
Score = 39.3 bits (90), Expect = 2.6, Method: Composition-based stats.
Identities = 45/236 (19%), Positives = 92/236 (38%), Gaps = 41/236 (17%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E + ++ + NP ++A + + EA+ D +I+L P + K
Sbjct: 416 YDEAIQAFDEAIRLNPEYVDAWYSKGNALDSQSRYDEAIQAYDEVIKLNPEYADAWNSKG 475
Query: 191 QVQSYAGESEAAIKGFEEILRKDP-------------LRVEAYHGLVMAYDGSDK----- 232
+ G AIK F+E +R++P + ++ Y + A+D + +
Sbjct: 476 TAFNSQGRYNEAIKAFDEAIRRNPEYADAWNNKGVALVSLDKYEEAIQAFDEATRLNPED 535
Query: 233 ---------------KLNEVEKRIEKAME------RCKKEKKKSDLRDFKLLIAQIKVME 271
K E + +++ R E + L L+ + +E
Sbjct: 536 ADAWLKKGVAFYHLGKYKETIQVCNVSIQAYDDDLRWNPEDANARLSKGIALMLKGLALE 595
Query: 272 S--KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ K+ +A++ Y+E + P D + +G L K DEA + +++ RL P +
Sbjct: 596 TLDKYEDAVQAYDEAISLNPDDVAAWENRGAALYSLGKYDEAVQAYDEVLRLNPED 651
Score = 37.4 bits (85), Expect = 9.8, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 74/181 (40%), Gaps = 23/181 (12%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ + ++ ++ NP+D+ A + K EAV D ++ L P + K
Sbjct: 600 YEDAVQAYDEAISLNPDDVAAWENRGAALYSLGKYDEAVQAYDEVLRLNPEDANAWKKKG 659
Query: 191 QVQSYAGESEAAIKGFEEILRKDP-------------LRVEAYHGLVMAYDGSDKKLNEV 237
E E ++K +E +R +P L +E Y + A + + + NE
Sbjct: 660 YALHSLEEHEESVKALDEAIRLNPNDAGCWLIKSFNLLIIEKYDEAINASEEAIRAYNET 719
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQ---------IKVMESKHSEALRVYEELVKEE 288
E+ + + S+++ + LIA+ I + +++EA++ + E V
Sbjct: 720 ITTYEEIVSLNPENSTASNIKS-RTLIAKGNGWALKGIILGEQHEYNEAMQAFNEAVSLN 778
Query: 289 P 289
P
Sbjct: 779 P 779
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD 213
L+++ ++ +L EA DVI R+ ++EPNEF W LL A +++ G E E++L+
Sbjct: 436 CLVDMFVRLGRLDEAFDVIKRM-DVEPNEFIWLLLIAGCRNH-GNEELGFYAAEQLLKLK 493
Query: 214 PLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDF 260
P E Y L+ Y S ++ +V + R KE+K L+D+
Sbjct: 494 PRSTETYVVLLNMYI-SAERWEDVS-----MVRRLMKEEKVGKLKDW 534
>gi|87303213|ref|ZP_01086006.1| hypothetical protein WH5701_12183 [Synechococcus sp. WH 5701]
gi|87282108|gb|EAQ74069.1| hypothetical protein WH5701_12183 [Synechococcus sp. WH 5701]
Length = 285
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 82/174 (47%), Gaps = 4/174 (2%)
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA +++R+ + +P + +L+ A+++ + A + ++L P R+EA + +
Sbjct: 88 AEATALLERMADQQPERWSLRLMLAELRRDQKDPSGAEREVRQLLNLKPDRIEALQLMAL 147
Query: 226 AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELV 285
+ E E + KA ++ +EK + LL+A ++ + A +Y++L
Sbjct: 148 LQL-EQGRGPEAEALLTKAYQQASREKAGAKSLAIGLLLADLQQRRGQIPAADNLYKQLT 206
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVAT 339
P D RP L Q ++ K EA + E+ RRL P N P + +D++ A
Sbjct: 207 AAHPEDPRPLLGQAMLRQQQGKTREALELLERARRLKP-NQP--DTRLDDVAAA 257
>gi|356521558|ref|XP_003529421.1| PREDICTED: uncharacterized protein LOC100790462 [Glycine max]
Length = 389
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 16/253 (6%)
Query: 79 TSVTVAAAALLF-MRLPFHSIKPAIA-APVAAAATVESTNESTKDTTSAREDVSYEEKEK 136
T + V A +F + F P+ + +P +A V S S + + + + K
Sbjct: 133 TKIGVGVAVAVFGLVFAFGDFLPSGSVSPTEDSAVVNSK-------LSEEDKATLQSRLK 185
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
E E L+ + D AL+ + + A ++D L + +PN+ + L +V+
Sbjct: 186 EFEATLSNSSRDPTALEGAAITLAELGEYARAASLLDDLTKEKPNDADVFRLLGEVKYEL 245
Query: 197 GESEAAIKGFEEILR--KDPLRVEAYHGLVMAYDGSDKKLNEVE----KRIEKAMERCKK 250
+ E ++ ++ R KD ++ E GL + + K V+ R + +
Sbjct: 246 KDYEGSVAAYKSSARVSKD-IQFEVLRGLSNSLLAAKKPEEAVQLLLAYREHLSSDSNPT 304
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ +K D +LL+ + +A+ VY++L+ P DFR YL +GII + +
Sbjct: 305 DSQKLDPVQVELLLGKAYSDWGHVRDAVAVYDQLISTHPNDFRGYLAKGIILKENKNIGD 364
Query: 311 AEKQFEKFRRLVP 323
AE+ F + R P
Sbjct: 365 AERMFIQARFFAP 377
>gi|158339139|ref|YP_001520316.1| hypothetical protein AM1_6065 [Acaryochloris marina MBIC11017]
gi|158309380|gb|ABW30997.1| TPR domain protein [Acaryochloris marina MBIC11017]
Length = 712
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
R S+ A+ R+IEL PN + L +A + + ++AI+ + I+R DP V
Sbjct: 469 RNASRDAAGAISDFSRVIELNPNRLQAYLWRATLYMAQTDYQSAIQDYSAIIRLDPKNVL 528
Query: 219 AY-------------HGLVMAYDGSDKKLN--EVEKRIEKAMERCKKEKKKSDLRDFKLL 263
A+ G + YD KLN VE +A R + L+D++++
Sbjct: 529 AFSQRGSTRFIQGDQQGALKDYD-QLIKLNPKNVEAYDRRAHVRRYSGNPQGALQDYRMI 587
Query: 264 -------------IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
IA + ++ A+ Y +L +P D Y+ +G +Y ++ E
Sbjct: 588 TKINPRNSRAYEQIASLSEDQNDLEGAIAAYGQLQTLKPNDTSVYMSRGQLYEKQKRYVE 647
Query: 311 AEKQFEKFRRLVP 323
A + K L P
Sbjct: 648 AIADYTKMIELQP 660
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%)
Query: 141 HLAAN---PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
HL AN P+ ++ ++ +S A V+ + I P E L +A +G
Sbjct: 380 HLPANAPPPSPVDDALINAAIKAQSGDYAGARAVLSQAIGTSPREARLYLARANYAIASG 439
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+++AA++ + ++ DP +AY L AY + + + +E + ++ L
Sbjct: 440 QTQAALQDLDRVIEFDPKAEQAYW-LRGAYRNASRDAAGAISDFSRVIE-LNPNRLQAYL 497
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
L +AQ + + A++ Y +++ +P++ + +G + + A K +++
Sbjct: 498 WRATLYMAQ-----TDYQSAIQDYSAIIRLDPKNVLAFSQRGSTRFIQGDQQGALKDYDQ 552
Query: 318 FRRLVPRN 325
+L P+N
Sbjct: 553 LIKLNPKN 560
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 130 SYEEKEKEIEQHLAA-------NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE 182
S E + ++E +AA PND + ++ K ++ VEA+ ++IEL+P +
Sbjct: 603 SLSEDQNDLEGAIAAYGQLQTLKPNDTSVYMSRGQLYEKQKRYVEAIADYTKMIELQPFQ 662
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILR 211
W +++ + AG+ A + ++ +
Sbjct: 663 TSWFIMRGSAREKAGQRAGAKADYRQVAK 691
>gi|406591862|ref|YP_006739042.1| hypothetical protein B711_0064 [Chlamydia psittaci CP3]
gi|406594486|ref|YP_006741199.1| hypothetical protein B599_0062 [Chlamydia psittaci MN]
gi|407457601|ref|YP_006735906.1| hypothetical protein B601_0060 [Chlamydia psittaci WS/RT/E30]
gi|410858038|ref|YP_006973978.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|405782918|gb|AFS21666.1| tetratricopeptide repeat family protein [Chlamydia psittaci MN]
gi|405785579|gb|AFS24325.1| tetratricopeptide repeat family protein [Chlamydia psittaci
WS/RT/E30]
gi|405787734|gb|AFS26477.1| tetratricopeptide repeat family protein [Chlamydia psittaci CP3]
gi|410810933|emb|CCO01576.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
Length = 335
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + K +EA++ D+++EL+P + KA
Sbjct: 94 EEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYIEAIECFDKILELDPWNPQSLYNKAV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + + AI E +RK+PL +A+ + + Y L K+ +KA E ++
Sbjct: 154 VLTDMNNEQEAIALLETTVRKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 205
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + DL D + + K AL+ ++E + EE D Y+ G+ Y L++
Sbjct: 206 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAYMDLKQN 263
Query: 309 DEAEKQFEK 317
+A F +
Sbjct: 264 RQASDAFHR 272
>gi|424903282|ref|ZP_18326795.1| TPR domain protein [Burkholderia thailandensis MSMB43]
gi|390931155|gb|EIP88556.1| TPR domain protein [Burkholderia thailandensis MSMB43]
Length = 614
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LA NP D +AL +R + + EA D++ R +EL PN+ QL
Sbjct: 18 DDAEHGYRAALATNPADADALHLFGVLRHQQGRHEEAADLVGRAVELRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ E+A+ +
Sbjct: 78 AFKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDA-FERALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H AL + ++ P + G+ L DEA
Sbjct: 137 ASIHN------NLGNALNALGRHDGALAAFRRALELRPGHAGAHNNLGMALAALGDTDEA 190
Query: 312 EKQF 315
F
Sbjct: 191 VAHF 194
>gi|430741335|ref|YP_007200464.1| hypothetical protein Sinac_0326 [Singulisphaera acidiphila DSM
18658]
gi|430013055|gb|AGA24769.1| tetratricopeptide repeat protein [Singulisphaera acidiphila DSM
18658]
Length = 779
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 7/161 (4%)
Query: 165 LVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV 224
L +A+ D I L+PN+ + + GE + AI F E +R DP AY
Sbjct: 325 LDKAIADFDEAIRLDPNDASAYVNQGCAWGEKGEHDKAIADFNEAIRLDPTNTWAYLNRS 384
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
A+ S+K+ E +K I A E + + + + FK A K E H +A+ E
Sbjct: 385 HAW--SEKE--EYDKAIADANEIIRLDPQNA-WAYFKRGYAWGKKKE--HDKAIADDNEA 437
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
++ +P + YL +G + + D+A F K RL P N
Sbjct: 438 IRLDPTNAWAYLNRGYAWDEKEEHDKAITDFNKAIRLDPTN 478
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A+ + I+L+PN L + S + + AI F + +R DP+ AY A+
Sbjct: 498 AIADFNEAIQLDPNYTSAYLNRGYAWSQKNDYDKAIADFNKAIRLDPINAPAYFNRGHAW 557
Query: 228 ---DGSDKKLNEVEKRI----EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRV 280
+G DK + + + I A+ + +S K E H +A+
Sbjct: 558 SQKEGYDKAIADYNEAIRLDPNNALAYLNRGHARS------------KTQE--HDKAIAD 603
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN---HPYREY 331
Y E ++ +P+ Y+ + I ++ + D+A F + R+ P++ H R Y
Sbjct: 604 YNEAIRIDPKAANAYIYRAITWSRKKDYDKAITDFTEAIRIDPKDASSHSNRGY 657
>gi|330508351|ref|YP_004384779.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929159|gb|AEB68961.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 440
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 88/197 (44%), Gaps = 11/197 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E + ++ + +P D A K +K E++ D I L P E + K
Sbjct: 108 YDEAIEAYDEAIRLDPTDAIAWFNKGNSLNKQKKYDESIKAYDEAIGLNPVLAEPWIGKG 167
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERC 248
+ + G+ + AI+ ++E +R DP V A+ G+ +A G K +E + ++A+
Sbjct: 168 KSLADQGKYDEAIEAYDEAIRLDPANVAAWGNKGVSLADQG---KYDEAIEAYDEAIRLD 224
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + L + KH EA+ Y+E ++ +P D + +G+ K
Sbjct: 225 PTDAAVWGNKGVSL------ADQGKHDEAIEAYDEAIRLDPTDAAVWGNKGVSLVDQGKY 278
Query: 309 DEAEKQFEKFRRLVPRN 325
DEA + +++ RL P N
Sbjct: 279 DEAIEAYDEAIRLDPAN 295
>gi|157821925|ref|NP_001100736.1| intraflagellar transport protein 88 homolog [Rattus norvegicus]
gi|149064079|gb|EDM14349.1| intraflagellar transport 88 homolog (Chlamydomonas) (predicted)
[Rattus norvegicus]
Length = 815
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKEIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEMREQRIKS 730
>gi|416352858|ref|ZP_11681409.1| TPR repeat-containing protein [Clostridium botulinum C str.
Stockholm]
gi|338195695|gb|EGO87945.1| TPR repeat-containing protein [Clostridium botulinum C str.
Stockholm]
Length = 308
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE---KK 253
GE +AIK ++EIL +P AY+GL + YD ++ E A+E KK
Sbjct: 58 GEYISAIKKYKEILNINPNDERAYYGLAIIYDNKEE--------YEIAIEYYKKAITINP 109
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
K + F L A V K EA++ Y+E++ + +DF L G IY L K + A +
Sbjct: 110 KYNRAYFFLAGAYDAV--GKKEEAIKCYKEVLNMDKKDFWANLNLGSIYEELNKNELAIE 167
Query: 314 QFEKFRRLVPRNH 326
F+K + P N+
Sbjct: 168 FFDKSISIDPYNY 180
>gi|167837462|ref|ZP_02464345.1| TPR domain protein [Burkholderia thailandensis MSMB43]
Length = 331
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LA NP D +AL +R + + EA D++ R +EL PN+ QL
Sbjct: 18 DDAEHGYRAALATNPADADALHLFGVLRHQQGRHEEAADLVGRAVELRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ E+A+ +
Sbjct: 78 AFKALGRLDEAIERFRNALTLAPEFPLAHYNLGNAYAAQERHDDAVDA-FERALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H AL + ++ P + G+ L DEA
Sbjct: 137 ASIHN------NLGNALNALGRHDGALAAFRRALELRPGHAGAHNNLGMALAALGDTDEA 190
Query: 312 EKQF 315
F
Sbjct: 191 VAHF 194
>gi|325295455|ref|YP_004281969.1| hypothetical protein Dester_1275 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065903|gb|ADY73910.1| Tetratricopeptide TPR_1 repeat-containing protein
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 597
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y++ EK +E+ L NP++I AL+ + + +K K EA++VI+RL++L+P + +LL
Sbjct: 248 YKKAEKFLEKVLDKNPDNIYALKEIFIIYLKQNKTNEALNVINRLVKLDP--YNLRLLSW 305
Query: 191 QVQSY--AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERC 248
S E + I E I + +P Y L +AY E+ EKA+E
Sbjct: 306 VAASLFEMKEYKKVIPLIERITKLNPDNPNVYFMLGLAY--------EMSGNYEKALEAY 357
Query: 249 KK 250
+K
Sbjct: 358 EK 359
>gi|359458341|ref|ZP_09246904.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 712
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 79/193 (40%), Gaps = 29/193 (15%)
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
R S+ A+ R+IEL PN + L +A + + ++AI+ + I+R DP V
Sbjct: 469 RNASRDAAGAISDFSRVIELNPNRLQAYLWRATLYMAQTDYQSAIQDYSAIIRLDPKNVL 528
Query: 219 AY-------------HGLVMAYDGSDKKLN--EVEKRIEKAMERCKKEKKKSDLRDFKLL 263
A+ G + YD KLN VE +A R + L+D++++
Sbjct: 529 AFSQRGSTRFIQGDQQGALKDYD-QLIKLNPKNVEAYDRRAHVRRYSGNPQGALQDYRMI 587
Query: 264 -------------IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
IA + ++ A+ Y +L +P D Y+ +G +Y ++ E
Sbjct: 588 TKINPRNSRAYEQIASLSEDQNDIEGAIAAYGQLQTLKPNDTSVYMSRGQLYEKQKRYVE 647
Query: 311 AEKQFEKFRRLVP 323
A + K L P
Sbjct: 648 AIADYTKMIELQP 660
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 83/188 (44%), Gaps = 10/188 (5%)
Query: 141 HLAAN---PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
HL AN P+ ++ ++ +S A V+ + I P E L +A +G
Sbjct: 380 HLPANAPPPSPVDDALINAAIKAQSGDYAGARAVLSQAIGTSPREARLYLARANYAIASG 439
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+++AA++ + ++ DP +AY L AY + + + +E + ++ L
Sbjct: 440 QTQAALQDLDRVIEFDPKAEQAYW-LRGAYRNASRDAAGAISDFSRVIE-LNPNRLQAYL 497
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
L +AQ + + A++ Y +++ +P++ + +G + + A K +++
Sbjct: 498 WRATLYMAQ-----TDYQSAIQDYSAIIRLDPKNVLAFSQRGSTRFIQGDQQGALKDYDQ 552
Query: 318 FRRLVPRN 325
+L P+N
Sbjct: 553 LIKLNPKN 560
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 130 SYEEKEKEIEQHLAA-------NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE 182
S E + +IE +AA PND + ++ K ++ VEA+ ++IEL+P +
Sbjct: 603 SLSEDQNDIEGAIAAYGQLQTLKPNDTSVYMSRGQLYEKQKRYVEAIADYTKMIELQPFQ 662
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILR 211
W +++ + AG+ A + ++ +
Sbjct: 663 TSWFIMRGSAREKAGQRAGAKADYRQVAK 691
>gi|159899989|ref|YP_001546236.1| serine/threonin protein kinase [Herpetosiphon aurantiacus DSM 785]
gi|159893028|gb|ABX06108.1| serine/threonine protein kinase with TPR repeats [Herpetosiphon
aurantiacus DSM 785]
Length = 916
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 18/192 (9%)
Query: 153 QTLMEVRIKSQKLVEAVDVIDRLIELE-------PNEFEWQLLKAQVQSYAGESEAAIKG 205
QT + + +V+ +D +R I L+ N + +A+V + GE E A +
Sbjct: 612 QTSRDAGAGKEFVVDGIDNFNRAIGLQEQLPLLRNNIGYFYAEQARVALHLGEDETAAQR 671
Query: 206 FEEILRK--DPLRVEAYHGLVMAYDGS----DKKLNEVEKRIEKAMERCKKEKKKSD--- 256
FE+ + D L ++ +GL A G ++K E ++ + A+ER +++ +
Sbjct: 672 FEKAYQSFDDALALDPNYGLAFAGKGWTQIYERKYEEAQQFFDLALERNQRDPNALNGRA 731
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L ++ L +S ++ A+R YE + E P Y+ G +Y L + +K E
Sbjct: 732 LTNWWLGRNNSSDPQSDYAAAIRDYEAAIAEAPSWLSVYVDLGYVY--LYDTKDTDKAIE 789
Query: 317 KFRRLVPRNHPY 328
F++ + R+ Y
Sbjct: 790 TFKKALERDPEY 801
>gi|329765153|ref|ZP_08256735.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138356|gb|EGG42610.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 600
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 17/175 (9%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +PN+I+A + ++ + ++ + EA+ ++++E+ PN E LL Q++ ++
Sbjct: 230 LEVSPNNIDAHLLVGKINMNAKIINEALAHFEKVLEISPNNIEAHLLLGQIKMDLNNTDE 289
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK--RIEKAMERCKKEKKKSDLRD 259
A+ FE++L P + DG + K+ +EK ++++A+E C E+ + L D
Sbjct: 290 ALAHFEKVLEISPNHM----------DGLNSKIILLEKLGKVDEAIEYC--ERFAASLPD 337
Query: 260 --FKLLIAQIKVMESKH-SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+LL I + + SEAL + +++ + + L + I+TL ++ EA
Sbjct: 338 PTEQLLKKGILLFNNNRISEALVCFNDILGKSNNNNVALLYKAKIFTLKQEFQEA 392
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E +I + + +N + +E+L L ++ IK+ + + +++L+E+ PN + LL ++
Sbjct: 187 ENAVKILESIVSNNDHLESLLLLGQIAIKNSNSHKGLSYLNKLLEVSPNNIDAHLLVGKI 246
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLV----MAYDGSDKKLNEVEKRIE 242
A A+ FE++L P +EA H L+ M + +D+ L EK +E
Sbjct: 247 NMNAKIINEALAHFEKVLEISPNNIEA-HLLLGQIKMDLNNTDEALAHFEKVLE 299
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 88/216 (40%), Gaps = 15/216 (6%)
Query: 115 TNESTKDTTSAREDVS---YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
T++ T D A ++ + E K E L NP AL +L +A++
Sbjct: 65 TDDFTDDLNLANYFLACKKFTESLKYYESALVKNPQSYSALCNKGLCLYNLSQLDDAIEC 124
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLVMAYDG 229
D ++ N E L+K ++ + AI F +L +P +EA Y G
Sbjct: 125 YDEALKTYHNIPEAFLMKGKILLSKQNTSEAINQFYHVLDLEPENIEAKFYLG------- 177
Query: 230 SDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
K L E RIE A++ + +D + LL+ QI + S + L +L++ P
Sbjct: 178 --KSLVE-SNRIENAVKILESIVSNNDHLESLLLLGQIAIKNSNSHKGLSYLNKLLEVSP 234
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ +L G I + +EA FEK + P N
Sbjct: 235 NNIDAHLLVGKINMNAKIINEALAHFEKVLEISPNN 270
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 23/203 (11%)
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE--WQLLKAQVQSYAGESEAAIKGFE 207
EA ++ + Q EA++ +++LEP E + L K+ V+S E A+K E
Sbjct: 137 EAFLMKGKILLSKQNTSEAINQFYHVLDLEPENIEAKFYLGKSLVES--NRIENAVKILE 194
Query: 208 EIL-RKDPLRVEAYHG-LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA 265
I+ D L G + + S K L+ + K +E + D LL+
Sbjct: 195 SIVSNNDHLESLLLLGQIAIKNSNSHKGLSYLNKLLEVSPNNI----------DAHLLVG 244
Query: 266 QIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+I + +EAL +E++++ P + +L G I L DEA FEK + P N
Sbjct: 245 KINMNAKIINEALAHFEKVLEISPNNIEAHLLLGQIKMDLNNTDEALAHFEKVLEISP-N 303
Query: 326 HPYREYFVDNMVATKIFGEKVDR 348
H +D + + I EK+ +
Sbjct: 304 H------MDGLNSKIILLEKLGK 320
>gi|224532851|ref|ZP_03673466.1| hypothetical protein BBUWI9123_0229 [Borrelia burgdorferi WI91-23]
gi|224512240|gb|EEF82626.1| hypothetical protein BBUWI9123_0229 [Borrelia burgdorferi WI91-23]
Length = 791
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 578 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKIEYLYLKASINLKKENYQNA 636
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 637 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 667
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ + P + E + Q
Sbjct: 347 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVYSIRPIDLENTKSRQQ---- 398
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 399 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 447
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 448 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 504
Query: 316 EK 317
EK
Sbjct: 505 EK 506
>gi|225443365|ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258138 [Vitis vinifera]
gi|297735765|emb|CBI18452.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLL---KAQ 191
++ E L+++P D AL+ ++ + A +++ ++ +PN+ E ++LL K
Sbjct: 201 QQYEATLSSSPKDQTALEAAAVTLVELGEYTRAASLLEDFVKEKPNDPEAFRLLGEVKFA 260
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
++ Y G S AA + ++ + + E GL A + KK +E + + + ER KE
Sbjct: 261 LKDYEG-SAAAYRSSAKV--SETVDFEVLRGLTNALLAA-KKPDEAVQVLLASRERLNKE 316
Query: 252 KK-----KSDLR------------DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRP 294
K KSD +LL+ + S+A+ +Y++L+ P DFR
Sbjct: 317 KSSNLNIKSDSGTKETESQEVDPVQVELLLGKAYSDWGHISDAVSLYDQLISSHPEDFRG 376
Query: 295 YLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
YL +GII +AE+ F + R P
Sbjct: 377 YLAKGIILKENGNIGDAERMFIQARFFAP 405
>gi|206890955|ref|YP_002249256.1| TPR domain protein, [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 542
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L + +I+ALQ L V +K +K+ EA++V +++++ PN+ E + +G +
Sbjct: 73 LKEDTENIDALQVLASVYVKEKKVKEAIEVYEKILQQSPNKIEMLSKIGNLYLISGMYDK 132
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAY 227
AI+ F++IL++D + A H L + Y
Sbjct: 133 AIETFKKILKEDSENIMALHFLGIIY 158
>gi|209526966|ref|ZP_03275483.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209492568|gb|EDZ92906.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 631
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES 199
Q L PND + K QK +A+D DR I LE N +E + V S
Sbjct: 361 QALKIEPNDYAVWHNRGALLRKFQKYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRY 420
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
+ AI ++ ++ +P + + + MA L + + E C ++ + ++
Sbjct: 421 QEAISSYDRAIQINPGQFDIWANRGMA-------LCHIHQYSEAL--SCYEQAISLNSKE 471
Query: 260 FKLLIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+L I+Q V+ ++H EA+ Y+ + + + ++ +G I T L++ ++A +++
Sbjct: 472 PELWISQGGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDR 531
Query: 318 FRRLVP 323
L P
Sbjct: 532 VIALQP 537
>gi|198420279|ref|XP_002129474.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) isoform 1 [Ciona intestinalis]
Length = 833
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P DI+ ++ L ++SQ +A+ +R ++PNE +WQL+ A +G + A +
Sbjct: 629 PADIDTVEWLGGYYVESQFSEKAIKYFERAAVIQPNEVKWQLMVASCYRRSGNYQGAFEK 688
Query: 206 FEEILRKDPLRVEA--YHGLVMAYDGSDKKLNEVEKRIEKA 244
+++I K P +E Y + + G +K+L E ++ KA
Sbjct: 689 YKQIHGKFPDNIECLKYLNRLCSDLGLNKELQEFANKLRKA 729
>gi|302817471|ref|XP_002990411.1| hypothetical protein SELMODRAFT_428896 [Selaginella moellendorffii]
gi|300141796|gb|EFJ08504.1| hypothetical protein SELMODRAFT_428896 [Selaginella moellendorffii]
Length = 685
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
++ L A + DR++ ++P W + QV+ A E A+ F+E +R+ P AY
Sbjct: 236 RASSLDRACRIFDRIVAMDPARTAWLEGRGQVRVDAKRFEEAVADFDEAIRRQPENYRAY 295
Query: 221 HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES--KHSEAL 278
G +A++G + N V E A++R + + RD ++ ++ + S ++ EAL
Sbjct: 296 SGRALAFEGLAQWSNAVADYTE-ALQRG---RAATGYRDPYVMNSRGNALASLGRYKEAL 351
Query: 279 RVY 281
R Y
Sbjct: 352 RDY 354
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 17/143 (11%)
Query: 149 IEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEE 208
++ L+++ ++ ++ EA DV+ ++ EPNE W +L A +S+ G+S+ E+
Sbjct: 515 MDHFACLIDMYLRLGRVEEAFDVVHKM-NFEPNETIWSMLIAGCRSH-GKSDLGFYAAEQ 572
Query: 209 ILRKDPLRVEAYHGLVMAY--DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQ 266
+L+ P VE Y L+ + G K +++V K + KE+K L+D+ + +
Sbjct: 573 LLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLM--------KEEKVGKLKDWSWISIK 624
Query: 267 IKVMESK-----HSEALRVYEEL 284
KV K H ++L +Y+ L
Sbjct: 625 EKVYSFKPNDKSHCQSLEMYKLL 647
>gi|341940821|sp|Q61371.2|IFT88_MOUSE RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
Full=Recessive polycystic kidney disease protein Tg737;
AltName: Full=Tetratricopeptide repeat protein 10;
Short=TPR repeat protein 10; AltName:
Full=TgN(Imorpk)737Rpw
Length = 824
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 617 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 676
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 677 YKEIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEMREQRIKS 729
>gi|239915965|ref|NP_033402.2| intraflagellar transport protein 88 homolog [Mus musculus]
gi|148704224|gb|EDL36171.1| intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 825
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKEIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEMREQRIKS 730
>gi|145478569|ref|XP_001425307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392376|emb|CAK57909.1| unnamed protein product [Paramecium tetraurelia]
Length = 1388
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 9/168 (5%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
+K EA+ + I+L P ++W + + E E A++ + + + +P +AY
Sbjct: 238 EKYEEALSDYNMAIKLNPKVYKWFYFQGLLFKVLNEKEKALEEYNQAISVNPKFAKAYKN 297
Query: 223 LVMAY---DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVME--SKHSEA 277
+ Y D +DK L++ K +E K++K R KL++ + +++ ++ A
Sbjct: 298 RAILYKEIDQNDKALSDYTK----ILELNPKDEKIYQFRGKKLVLIKGNLLKQLGQNELA 353
Query: 278 LRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
L+ Y + ++ P D Y+ + +Y L + D A K ++K + P+N
Sbjct: 354 LQDYTKTIEINPNDTENYVRRATLYKQLGQNDLATKDYDKILEIEPKN 401
>gi|74149301|dbj|BAE22424.1| unnamed protein product [Mus musculus]
Length = 825
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKEIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEMREQRIKS 730
>gi|330815873|ref|YP_004359578.1| hypothetical protein bgla_1g09390 [Burkholderia gladioli BSR3]
gi|327368266|gb|AEA59622.1| TPR domain protein [Burkholderia gladioli BSR3]
Length = 612
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E E++ LAANP+D +AL +R + + EA D++ R +EL PN+ L
Sbjct: 19 EAERDYRAALAANPSDADALHLFGVLRHQQGQNQEAADLVGRAVELRPNDAALHLNLGNA 78
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAM 245
G + AI F L P A++ L AY ++ + V+ E+A+
Sbjct: 79 LKALGRIDDAIVRFRNALTLAPDFPLAHYNLGNAYAAQERHEDAVDA-FERAL 130
>gi|218199444|gb|EEC81871.1| hypothetical protein OsI_25661 [Oryza sativa Indica Group]
Length = 434
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 275 SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
S+A+ VYE L+ E P DFR YL +GII K EAE+ F + + P
Sbjct: 373 SDAVAVYENLITEHPEDFRGYLAKGIILKENGKSGEAERMFIQAKFFAP 421
>gi|398355141|ref|YP_006400605.1| O-linked GlcNAc transferase [Sinorhizobium fredii USDA 257]
gi|390130467|gb|AFL53848.1| O-linked GlcNAc transferase [Sinorhizobium fredii USDA 257]
Length = 296
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 88/215 (40%), Gaps = 10/215 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + +A+NP+D EA ++ + A+ D+ I+L P+ ++ +A
Sbjct: 62 EENIASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRAL 121
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V G +AA+ + L+ +P AY G Y ++ +L+ KA++ +
Sbjct: 122 VHRNMGNQQAALSDYNAALQLNPNYDVAYIGRGNLYRQAN-QLDAAFNDFNKAVQLDTTD 180
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ R LI Q + + H++A+ + + P PY +GI Y D A
Sbjct: 181 PRAYHNRG---LIYQAR---NDHAQAIEDFSTAISLSPSSPEPYNGRGISYVAQGDDDNA 234
Query: 312 EKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
F F + N E + + + + GEK
Sbjct: 235 ---FSDFNTAINLNGKLAESWANQALVYERRGEKA 266
>gi|422338995|ref|ZP_16419955.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
gi|355372122|gb|EHG19465.1| tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. polymorphum F0401]
Length = 652
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 7/194 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ + + + NPND A +A++ ++ I+L N + +
Sbjct: 162 YEKAINDFNKAIDLNPNDDSAYFNRGTAFTNLSNYEKAINDFNKAIDLNSNNASYYNYRG 221
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ G + A+K F + + +P+ V Y L Y+ LN+ EK IE +
Sbjct: 222 TLYINQGNYDEAVKDFSKAIELNPIFVFGYSNLGSLYNN----LNDYEKAIENLNKAIDL 277
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ SD + + + V + K EA++ + + ++ P D Y GI+Y L ++
Sbjct: 278 DPNFSDAYNIRGITY---VNQEKFDEAVKDFSKAIELNPNDKEYYYNLGILYIDLNNYEK 334
Query: 311 AEKQFEKFRRLVPR 324
A + K L P
Sbjct: 335 AIETLNKAIDLDPN 348
>gi|365897686|ref|ZP_09435674.1| putative Peptidase, Caspase-like domain and TPR repeats
[Bradyrhizobium sp. STM 3843]
gi|365421565|emb|CCE08216.1| putative Peptidase, Caspase-like domain and TPR repeats
[Bradyrhizobium sp. STM 3843]
Length = 538
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 100 PAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKE--KEIEQHLAANPNDIEALQTLME 157
P+ AA V A A ST+ ST+ T A ++ + K + +AANP+D AL +
Sbjct: 345 PSPAAKVGAPA---STSTSTQANTQANTQIALADDPNIKSLSAKIAANPDDASALYRRGQ 401
Query: 158 VRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
V A+ D I + P + E + ++ GE +AA++ E LR P V
Sbjct: 402 VYASKGAYSLAIKDFDDTIRINPKDVEALNNRCWARTVIGELQAALRDCNEALRLRPTFV 461
Query: 218 EAY--HGLVMAYDGSDKKLN-------EVEKRIEKAM-ERCKKEKKKSDLRDFKLLIAQI 267
+A GL+ G++K ++ R+ ++ R +++ +D L IA
Sbjct: 462 DALDSRGLLNLKSGANKNAIADFDAALKINPRLTSSLYGRGLAKQRNGAAQDGALDIANA 521
Query: 268 KVME 271
K M+
Sbjct: 522 KAMD 525
>gi|354476527|ref|XP_003500476.1| PREDICTED: intraflagellar transport protein 88 homolog [Cricetulus
griseus]
Length = 825
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKEIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEMREQRIKS 730
>gi|499647|gb|AAB59705.1| unknown [Mus musculus]
Length = 824
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 617 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 676
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 677 YKEIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEMREQRIKS 729
>gi|420256324|ref|ZP_14759174.1| tetratricopeptide repeat protein [Burkholderia sp. BT03]
gi|398043450|gb|EJL36355.1| tetratricopeptide repeat protein [Burkholderia sp. BT03]
Length = 520
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 15/191 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE---LEPNEFEWQL 187
Y+E + L+ +P+ E L+ L V K A D R + P +
Sbjct: 21 YDEAAALLHGILSIDPDHSETLEALGYVAAKQGDFARAADYAMRAAQPASTNPQQLH--- 77
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMER 247
A + AG AI +E +L P E+ HG M+ + E E+ +++
Sbjct: 78 FAAHICQLAGRHADAIALYERVLAAYPDHAESLHGAAMSLVAT----GEHERALQRLARL 133
Query: 248 CKKEKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
++ + +++ + L+ Q++ ++ E L Y + + +P R Y+ G+ L
Sbjct: 134 TQRYPQSAEVHYNRGTLLGQME----RYDEELAAYRQAIALKPNFVRAYVNLGVALRDLH 189
Query: 307 KKDEAEKQFEK 317
+ DEA +QF+K
Sbjct: 190 RFDEALQQFKK 200
>gi|408673062|ref|YP_006872810.1| Tetratricopeptide TPR_1 repeat-containing protein [Emticicia
oligotrophica DSM 17448]
gi|387854686|gb|AFK02783.1| Tetratricopeptide TPR_1 repeat-containing protein [Emticicia
oligotrophica DSM 17448]
Length = 574
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 158 VRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
+ +K KL +A++ DRLI EP+E E+ + +AQ+ E AI L+K+P
Sbjct: 183 IYLKQNKLEKAIEEGDRLIASEPSEPEYVVQQAQILISNERYEQAITMLRNSLKKNPDFA 242
Query: 218 EAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEA 277
EA+ L Y +K NE+EK E+ E + D++ FK+L + + +++ S
Sbjct: 243 EAHVLLAEIY----RKQNELEKCNEELQEAFANKNLSVDVK-FKILNSYMLMLKDDSSNK 297
Query: 278 -----LRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
L + + LVK+ P++ + Y+ G LL KK E
Sbjct: 298 TLDNLLTLTQALVKQSPKEAKGYVILG---DLLMKKGE 332
>gi|238651127|ref|YP_002916985.1| TPR repeat-containing protein [Rickettsia peacockii str. Rustic]
gi|238625225|gb|ACR47931.1| TPR repeat-containing protein [Rickettsia peacockii str. Rustic]
Length = 229
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 92/219 (42%), Gaps = 36/219 (16%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVE----AVDVIDRLIELEPNEFEW 185
+E++ E ++ + NPND + +RI + E A++V ++ I L PN F+
Sbjct: 12 DFEKELAECDKAIKQNPND-AYIGYGFRLRILGLRFPEKYELALEVYNKAIVLNPNHFQT 70
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG------------LVM-------- 225
L K V G+ + A++ + + + DP AY+ LV+
Sbjct: 71 YLNKGAVLIQLGKYDLALEAYNKAIEVDPSHPYAYNNKAEILRKLEKYELVLEVYNKAIE 130
Query: 226 -------AYDGSDKKLNEVEKR--IEKAMERCKKEKKKS--DLRDFKLLIAQIKVMESKH 274
AY K +E+ KA +R + D D I I K+
Sbjct: 131 IDPNYSDAYFNKSKLFDELGNYEVALKAYDRALTYRHDDYLDYSDIYYNIGTILSRIQKY 190
Query: 275 SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
A+++Y + ++ P DFR Y+ +GI+ +L+K + A K
Sbjct: 191 DLAVKMYNKTIQLNPDDFRAYVNKGIVLGILKKYNLALK 229
>gi|198420281|ref|XP_002129495.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) isoform 2 [Ciona intestinalis]
Length = 821
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P DI+ ++ L ++SQ +A+ +R ++PNE +WQL+ A +G + A +
Sbjct: 629 PADIDTVEWLGGYYVESQFSEKAIKYFERAAVIQPNEVKWQLMVASCYRRSGNYQGAFEK 688
Query: 206 FEEILRKDPLRVEA--YHGLVMAYDGSDKKLNEVEKRIEKA 244
+++I K P +E Y + + G +K+L E ++ KA
Sbjct: 689 YKQIHGKFPDNIECLKYLNRLCSDLGLNKELQEFANKLRKA 729
>gi|414078950|ref|YP_006998268.1| TPR repeat-containing serine protease [Anabaena sp. 90]
gi|413972366|gb|AFW96455.1| TPR repeat-containing serine protease [Anabaena sp. 90]
Length = 613
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 82/190 (43%), Gaps = 9/190 (4%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
++ Q L NPND A VR + A+ ++ +++ PN E + + +S
Sbjct: 344 QDYNQALKINPNDALAYYNRGGVRSELGDKQGAIQDYNQALKINPNYAEAYINRGLARSD 403
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMA-YDGSDKKLNEVEKRIEKAMERCKKEKKK 254
+G+ + AI+ + + L+ +P AY +A YD DK+ + + K
Sbjct: 404 SGDKQGAIQDYNQALKINPNYAYAYINRGLARYDSGDKQGAIAD------FNQAIKINPN 457
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
D + +A+ + + + A++ Y + +K P D + Y +G + L K A +
Sbjct: 458 DDYAYYNRGLARSNLGDKQ--AAIQDYNQAIKINPNDAQAYNNRGATRSALGDKQAAIQD 515
Query: 315 FEKFRRLVPR 324
+ + ++ P
Sbjct: 516 YNQAIKINPN 525
>gi|225551900|ref|ZP_03772840.1| FF domain protein [Borrelia sp. SV1]
gi|225370898|gb|EEH00328.1| FF domain protein [Borrelia sp. SV1]
Length = 903
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 690 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 748
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + +++K+P AY L AY+ S K
Sbjct: 749 IPLYSLVIKKNPENTSAYINLAKAYEKSGNK 779
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ + P + E + Q
Sbjct: 459 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVHSIRPIDLENTKSRQQ---- 510
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E E+ K
Sbjct: 511 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENVYEKITKLTNTQ 559
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 560 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 616
Query: 316 EK 317
EK
Sbjct: 617 EK 618
>gi|414884258|tpg|DAA60272.1| TPA: hypothetical protein ZEAMMB73_377977 [Zea mays]
Length = 305
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 119/279 (42%), Gaps = 55/279 (19%)
Query: 79 TSVTVAAAALLFMR-------LPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSY 131
T V + A ++F LP+ S+ P +K++ ++ +S
Sbjct: 35 TRVGIGVAVVIFGLVFAFGDFLPYGSVSP------------------SKESAVVKQKLSQ 76
Query: 132 EEKEK------EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE- 184
EE+EK + L+ +PND AL+ + + +A +++LI++ P++ E
Sbjct: 77 EEEEKFKNALQGFQATLSKSPNDPTALEGAAVSLSELGEYEKASTFLEKLIKVIPDKAEA 136
Query: 185 WQLL---KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK--------- 232
++LL K +++ Y G S + + D + E GL + + K
Sbjct: 137 YRLLGEVKFELKDYEGSSSSYRS---ALSSSDNIDFEVLRGLTNSLLAAKKPDEAVDIIL 193
Query: 233 ----KLNEVEKR----IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
KLNE + +E + +++ + D LL+ + S+A+ VY++L
Sbjct: 194 LCRRKLNEKSQTGLADLEATNDNGRQKPQDIDPIQVDLLLGKAYSDWGHISDAISVYDKL 253
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ + P DFR YL +GII K +AE+ F + + P
Sbjct: 254 ITDHPEDFRGYLAKGIILKENGKAGDAERMFIQAKFFAP 292
>gi|330507774|ref|YP_004384202.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328928582|gb|AEB68384.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 432
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E K +Q ++ +P EA + K EA+ D+ I ++P E +K
Sbjct: 215 YDEAIKPFDQAISIDPQFAEAWYNKGTALGRLGKYDEAIKACDQAISIDPQLAETWTIKG 274
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERC 248
G+ + AI+ +++ + +P EA++ G+ + G + ++A++ C
Sbjct: 275 IALYDLGKYDEAIQAYDQAISINPQIAEAWYNKGVALTALG----------KYDEAIKAC 324
Query: 249 KKEKKKSDLRDFKLLIAQIKVME-SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+ + F I I + + K+ EA++ Y++ + P+ + +G+ T L K
Sbjct: 325 DQAISINPQDAFAWTIKGIALYDLGKYDEAIQAYDQANRINPQFAEAWYNKGVALTALGK 384
Query: 308 KDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGE 344
DEA K ++ + P+ + E + + V K G+
Sbjct: 385 YDEAIKACDQAISINPQ---FAEAWYNKGVVLKALGK 418
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP-NEFEWQLLK 189
Y+E +Q ++ +P A K EA+ D+ I ++P N + W K
Sbjct: 147 YDEAINAYDQAISIDPQYAYAWSNKGTALGHLGKYDEAIKACDQAISIDPQNAYAW-YNK 205
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
V G+ + AIK F++ + DP EA++ A G K +E K ++A+
Sbjct: 206 GTVLGILGKYDEAIKPFDQAISIDPQFAEAWYNKGTAL-GRLGKYDEAIKACDQAISIDP 264
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + ++ L K+ EA++ Y++ + P+ + +G+ T L K D
Sbjct: 265 QLAETWTIKGIALYDL------GKYDEAIQAYDQAISINPQIAEAWYNKGVALTALGKYD 318
Query: 310 EAEKQFEKFRRLVPRN 325
EA K ++ + P++
Sbjct: 319 EAIKACDQAISINPQD 334
>gi|312130499|ref|YP_003997839.1| tetratricopeptide tpr_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
gi|311907045|gb|ADQ17486.1| Tetratricopeptide TPR_1 repeat-containing protein [Leadbetterella
byssophila DSM 17132]
Length = 469
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 7/171 (4%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN ++ + ++V I L EA +++D P++ E Q + + Y+GE E A++
Sbjct: 67 PNSLDMMLNKVQVLINRLNLYEATEILDHASIFFPSDMEIQYFRGVINIYSGEHEKALEI 126
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA 265
FEEIL + Y + MA G L +E I + ++ +E KSD+ +L+ +
Sbjct: 127 FEEILPISEEKENIYFQMGMAQSG----LGLMEDSI-ISFQKAIEENSKSDIVYTELVFS 181
Query: 266 QIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
+ S + ++ L+ ++P + + G Y EA+ FE
Sbjct: 182 Y--ELASALDAGVAYFKGLIDKDPYNHLAWFALGQCYNNQALFSEAKDAFE 230
>gi|404318522|ref|ZP_10966455.1| hypothetical protein OantC_10032 [Ochrobactrum anthropi CTS-325]
Length = 285
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 18/209 (8%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
+ +NP D E KS + EA+ D+ I L PN ++ +A V Y G+S
Sbjct: 63 IQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTK 122
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKKKSDLRD 259
A++ + + ++ + AY G Y R+++A+ + + +D R
Sbjct: 123 AVQDYSKAIQLNSQYDAAYIGRGNVY--------RQAGRLDQALSDFNQAIALQTTDGRA 174
Query: 260 F--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+ + LI Q K +H +A+ + + + PY +GI Y L D A F+
Sbjct: 175 YHNRGLIYQAK---GQHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDD 228
Query: 318 FRRLVPRNHPYREYFVDNMVATKIFGEKV 346
F + + E + + + + G+K
Sbjct: 229 FNTAITLDQNIAESWANQALVYEHNGDKA 257
>gi|118362609|ref|XP_001014531.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89296298|gb|EAR94286.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1163
Score = 45.4 bits (106), Expect = 0.041, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 7/161 (4%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
K EA++ + IEL P E + L Q G + AIK F+E L +P Y L
Sbjct: 348 KYQEAINQYLKCIELNPKEDSYLLFLGIAQRNQGMFDEAIKSFKECLNLNPNYDVCYFNL 407
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEE 283
+ Y K+ + K ++C + +K D F L I+ K + ++A++ Y++
Sbjct: 408 GIVY-----KIKRIYDEAIKQFQKCLRLNRKYDACLFNLGISYKK--KGMLNKAIKQYKK 460
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+ P+ + GI Y DEA K F+ L P+
Sbjct: 461 CLSLNPKYDACHYNLGIAYKKKGMVDEALKSFQDCIDLNPK 501
>gi|329942368|ref|ZP_08291178.1| tetratricopeptide repeat family protein [Chlamydophila psittaci
Cal10]
gi|332287010|ref|YP_004421911.1| hypothetical protein CPSIT_0060 [Chlamydophila psittaci 6BC]
gi|384450146|ref|YP_005662746.1| type III secretion chaperone, putative [Chlamydophila psittaci 6BC]
gi|384451157|ref|YP_005663755.1| hypothetical protein CPS0A_0062 [Chlamydophila psittaci 01DC11]
gi|384452133|ref|YP_005664730.1| hypothetical protein CPS0D_0060 [Chlamydophila psittaci 08DC60]
gi|384453107|ref|YP_005665703.1| hypothetical protein CPS0C_0061 [Chlamydophila psittaci C19/98]
gi|384454086|ref|YP_005666681.1| hypothetical protein CPS0B_0062 [Chlamydophila psittaci 02DC15]
gi|392376263|ref|YP_004064041.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|407453535|ref|YP_006732643.1| hypothetical protein B595_0065 [Chlamydia psittaci 84/55]
gi|313847606|emb|CBY16594.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325506936|gb|ADZ18574.1| tetratricopeptide repeat protein [Chlamydophila psittaci 6BC]
gi|328815278|gb|EGF85266.1| tetratricopeptide repeat family protein [Chlamydophila psittaci
Cal10]
gi|328914240|gb|AEB55073.1| type III secretion chaperone, putative [Chlamydophila psittaci 6BC]
gi|334691888|gb|AEG85107.1| tetratricopeptide repeat protein [Chlamydophila psittaci C19/98]
gi|334692867|gb|AEG86085.1| tetratricopeptide repeat protein [Chlamydophila psittaci 01DC11]
gi|334693843|gb|AEG87060.1| tetratricopeptide repeat protein [Chlamydophila psittaci 02DC15]
gi|334694822|gb|AEG88038.1| tetratricopeptide repeat protein [Chlamydophila psittaci 08DC60]
gi|405780294|gb|AFS19044.1| tetratricopeptide repeat family protein [Chlamydia psittaci 84/55]
Length = 335
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 13/189 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + K +EA++ D+++EL+P + KA
Sbjct: 94 EEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYIEAIECFDKILELDPWNPQSLYNKAV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + + AI E +RK+PL +A+ + + Y L K+ +KA E ++
Sbjct: 154 VLTDMNNEQEAIVLLETTVRKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 205
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + DL D + + K AL+ ++E + EE D Y+ G+ Y L++
Sbjct: 206 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAYMDLKQN 263
Query: 309 DEAEKQFEK 317
+A F +
Sbjct: 264 RQASDAFHR 272
>gi|456352577|dbj|BAM87022.1| conserved exported hypothetical protein [Agromonas oligotrophica
S58]
Length = 431
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
++ ++ +PND EA + V ++L A+ D+ I L+P+ + +
Sbjct: 98 DLSMAISLDPNDAEAYELRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLR 157
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
G++E A++ ++E +R DP R + AY KKL E++K + E +++ K +
Sbjct: 158 GDNEKAVRDYDEAIRLDPDRPRTFTNRGAAY----KKLGEMDKALADDSEAIRRDPKVPE 213
Query: 257 LRDFKLLI-AQIKVMESKHSEALRVYEELVKEEPR 290
D + L A +K + +A+ Y++ ++ +P+
Sbjct: 214 YYDNRGLTHAAMK----DYDKAIADYDQAIRLQPK 244
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 13/141 (9%)
Query: 149 IEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEE 208
++ L+++ ++ ++ EA DV+ ++ EPNE W +L A +S+ G+S+ E+
Sbjct: 509 MDHFACLIDMYLRLGRVEEAFDVVHKM-NFEPNETIWSMLIAGCRSH-GKSDLGFYAAEQ 566
Query: 209 ILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIK 268
+L+ P VE Y L+ + S + +V K + K M KE+K L+D+ + + K
Sbjct: 567 LLKLKPKDVETYVSLLNMHI-SAGRWKDVSK-VRKLM----KEEKVGKLKDWSWISIKEK 620
Query: 269 VMESK-----HSEALRVYEEL 284
V K H ++L +Y+ L
Sbjct: 621 VYSFKPNDKSHCQSLEMYKLL 641
>gi|302344515|ref|YP_003809044.1| hypothetical protein Deba_3097 [Desulfarculus baarsii DSM 2075]
gi|301641128|gb|ADK86450.1| Tetratricopeptide TPR_2 repeat protein [Desulfarculus baarsii DSM
2075]
Length = 803
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 8/180 (4%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
++ E+ LA NP + A+ L + L +A ++DR++ LEP + + Q+
Sbjct: 601 QQYERALAINPENTSAMLGLATLSRFDGDLDKASQLLDRVLVLEPTSLVALVSRGQLHEQ 660
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGL--VMAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
A + A + + LR++ V A + L ++A G DK LNE ++A K
Sbjct: 661 ADQPTQAEADYRQALRQNADFVPAINNLAYLLAGQGGDKNLNEALTLAQRA-----KRLS 715
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
SD R L + + H+ AL EE K P D Y G + + +EA+K
Sbjct: 716 PSDPRVLDTL-GWVLSLRGAHASALPELEEARKLAPTDASVYYHLGSTLAKMGRANEAKK 774
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+ N+++A L +V + +++ EA ++ + +++ +P + +L Q S ++E A++
Sbjct: 100 DDNNLDAKIKLGQVSLLARRGDEAAELANNVLKRQPKNIDALILLGQAYSSQDKAEEAVR 159
Query: 205 GFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
+ + DP R + Y L Y D D+ L ++ + + A D+ +
Sbjct: 160 ALGQAKQLDPKRSDVYVLLAQEYIKLDRYDQALADLAQSVALA----------PDMLTPR 209
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR--KKDEAEKQFEKFR 319
LL Q+ + ++K +A + E + P++ R L ++ L+R K DEA K +
Sbjct: 210 LLTLQVYMKQNKLDQAEKTLREAIAMRPQEARLQLM--LVELLMRRQKSDEAGKTLREII 267
Query: 320 RLVPRNHPYR 329
P N YR
Sbjct: 268 ARHPENESYR 277
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDG-SDKKLNE--VEKRIEKA 244
L+ ++Q G+++ A+ F +++ P EAY MAY +++L + V K I A
Sbjct: 381 LQGRIQLEDGQAQQAVASFTQVIGDMPESPEAYFYRAMAYQALGERQLAQADVAKTISLA 440
Query: 245 MERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTL 304
E + + +A ++ + ++A+ E++K+EP++ +G +Y
Sbjct: 441 PENIRA----------RFFMASLQAQGGEVTQAIGEVNEIIKQEPKNAEAMSMRGQLYMS 490
Query: 305 LRKKDEAEKQFEKFRRLVP 323
+AE F RL P
Sbjct: 491 QGNLSQAEADFNALTRLRP 509
>gi|111115034|ref|YP_709652.1| surface-located membrane protein 1 [Borrelia afzelii PKo]
gi|384206707|ref|YP_005592428.1| hypothetical protein BafPKo_0210 [Borrelia afzelii PKo]
gi|110890308|gb|ABH01476.1| surface-located membrane protein 1 [Borrelia afzelii PKo]
gi|342856590|gb|AEL69438.1| tetratricopeptide repeat family protein [Borrelia afzelii PKo]
Length = 1013
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+I A+ L + ++ KL E++++I++ I L P + E+ LKA + + AI
Sbjct: 803 PNEI-AIYNLSIAKFENNKLEESLEIINKAINLNPEKSEYLYLKASINLKNENYQNAIPL 861
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ ++ K+P + AY L AY+ S K
Sbjct: 862 YNLVIEKNPENISAYINLAKAYEKSGNK 889
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 26/184 (14%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ + D+ ++ ++P + E + Q
Sbjct: 569 KDLNEFLITNPNDAYASKTLAQ----ANKIQQLEDLKSKVYSIKPGDLENPKTRQQ---- 620
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAY--DGSDKKLNEVEKRIEKAMERCKKEKK 253
AIK E L +P A L AY DG K V +I K + K++
Sbjct: 621 ------AIKDLNEFLITNPNDAYASKTLAQAYENDGDLLKAESVYDKITK-LTNAKEDY- 672
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+KL I + K+ + +HS + + + ++ +P+ + + +GI LL K +A +
Sbjct: 673 ------YKLGIIRFKLKKYEHS--IEAFNQTIRLDPKHKKAHNNKGIALILLNKNKQAIE 724
Query: 314 QFEK 317
FEK
Sbjct: 725 SFEK 728
>gi|333987050|ref|YP_004519657.1| hypothetical protein MSWAN_0828 [Methanobacterium sp. SWAN-1]
gi|333825194|gb|AEG17856.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 629
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 19/220 (8%)
Query: 104 APVAA-AATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKS 162
AP++A A T +S +E + E+ + +E+ + +P +I+ L T + K+
Sbjct: 375 APLSAEAGTCKS---------RVQEKIEPEKAAESLEKAIQIDPQNIKVLYTQAK-HFKA 424
Query: 163 QKLVE-AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
Q + A+DV++ +IE++ N LLK ++ GE A++ E + DP
Sbjct: 425 QNNTKMALDVLNNIIEIKSNFSPAWLLKGKILMDDGEYANALESLEFSIEIDPENP---- 480
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
+ + G + L +EK +E + K + + L A I ++ + EAL+
Sbjct: 481 ---LTWLGKAEMLKIMEKFVESLLYYGKVLQLDPENVHALLETANILGIKGDYDEALKFC 537
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
E VK P D + QG+I+ L + +EA + F+ +L
Sbjct: 538 ENAVKINPEDHELWNVQGMIFKCLERNEEALECFDAALKL 577
>gi|257075530|ref|ZP_05569891.1| TPR repeat-containing protein [Ferroplasma acidarmanus fer1]
Length = 405
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
++ + +K A++ + I++ P +++ KA SY + A++ + ++ +P
Sbjct: 119 DLLLDDKKYGPALEQYNTAIKILPGVYQFHYGKAMAYSYMEKFPEALEEYNRVIEIEPNF 178
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSE 276
EAY+ + Y DK + + E+AM+ +SD+ D L+ I K+ E
Sbjct: 179 GEAYYNRSIIYLDQDK-FEDAIRDAERAMDL------ESDVPDNFDLMGNILAAMEKYEE 231
Query: 277 ALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
AL+ Y E ++ + R Y GI+Y ++ A + ++K +LV
Sbjct: 232 ALKYYGEAIELDSRFAAAYYDMGIMYDNMKNYSNAIENYDKAIKLV 277
>gi|421592797|ref|ZP_16037453.1| hypothetical protein RCCGEPOP_26399 [Rhizobium sp. Pop5]
gi|403701423|gb|EJZ18274.1| hypothetical protein RCCGEPOP_26399 [Rhizobium sp. Pop5]
Length = 289
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 23/236 (9%)
Query: 121 DTTSAREDVSYEEKEKEIEQHLA-------ANPNDIEALQTLMEVRIKSQKLVEAVDVID 173
DTTS + V + +K + E+++A ANP D E ++ + +A++ +
Sbjct: 35 DTTSTSDAVIHIDKAQGSEENIASLTAVINANPKDPEGYNVRGSAYGRAGQFRQALNDFN 94
Query: 174 RLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY---DGS 230
+++ P F+ +A V G+ AI + L+ +P AY G Y
Sbjct: 95 TALQINPRFFQAYANRALVYRNMGQQPQAIADYNAALQINPSYDVAYIGRGNVYRMAGQD 154
Query: 231 DKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR 290
D N+ K I+ + + LI Q + + K A+ + + + P
Sbjct: 155 DPAFNDFSKAIQLGTTDGRAYHNRG-------LIYQKRNQQDK---AIDDFSKAISLAPN 204
Query: 291 DFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
PY +GI Y L D A F F + N E + + + + G+K
Sbjct: 205 SPEPYNGRGISYIALNDDDNA---FADFNHAIELNSNIAESWANQALVYERRGDKA 257
>gi|20090818|ref|NP_616893.1| hypothetical protein MA1970 [Methanosarcina acetivorans C2A]
gi|19915884|gb|AAM05373.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 389
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN-EFEWQLLKAQVQSYA 196
IEQ L P+D V + +L +A+ DR+IELEP E W K V +
Sbjct: 186 IEQVLEIVPDDFRVWYNRGVVLSEMGRLEDALAAYDRVIELEPVFEMAWD-NKGVVLARL 244
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK-KEKKKS 255
G E A++ +E++L ++P EA+ G D+K E+ +E + K +
Sbjct: 245 GRFEEALETYEKVLLRNPKYAEAWAGKGSVLSALDRK----EEALEAYLSALKIRPDYLE 300
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
L+ L +++ ++ EAL Y+ ++ P + +G++ + L +++EA +
Sbjct: 301 ALKSVGSLFSRL----GRYEEALAAYDTALQAAPEAPELWAGRGLVLSELDRQEEALQSC 356
Query: 316 EKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRESMASK 354
+ L P P E V KI E +++ AS+
Sbjct: 357 SRALELKPGFAPALE------VKVKILSEIGRQKARASQ 389
>gi|149598974|ref|XP_001516420.1| PREDICTED: intraflagellar transport protein 88 homolog
[Ornithorhynchus anatinus]
Length = 823
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R + P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERAALIRPTQVKWQLMVASCYRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI +K P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKEIHKKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRVEK-MKEMREQRVKS 730
>gi|295677297|ref|YP_003605821.1| hypothetical protein BC1002_2251 [Burkholderia sp. CCGE1002]
gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
Length = 628
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 7/201 (3%)
Query: 124 SAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF 183
+A D ++ E+ L NP+ ++AL L +R + + EA ++ R ++L P +
Sbjct: 23 AAHRDGRLDDAERGYRATLDHNPSHVDALHLLGVLRHQQGQHAEAAALVRRAVDLRPEDA 82
Query: 184 EWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEK 243
QL G+ +AAI+ F L P A++ L AY S + + E+
Sbjct: 83 ALQLNLGNALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAY-ASLGRHEDAADAFER 141
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
++ R + E S L A +H+EA+ + ++ P G+
Sbjct: 142 SL-RLQPEDASSHNNLGNALHAL-----GRHAEAIASFRRALELRPGHAGALNNMGMSLN 195
Query: 304 LLRKKDEAEKQFEKFRRLVPR 324
L + DEA FE + PR
Sbjct: 196 ALDRPDEAVPCFEAALAVEPR 216
>gi|374628887|ref|ZP_09701272.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanoplanus
limicola DSM 2279]
gi|373907000|gb|EHQ35104.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanoplanus
limicola DSM 2279]
Length = 1363
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 33/248 (13%)
Query: 127 EDVSYEEKEKEIEQH-LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW 185
E+ + EK + + L NP DI AL+ E+ +KS EA DV + LE + +
Sbjct: 924 ENTGHNEKALNVYNNILEINPADISALEKKAEILLKSHLFAEAKDVYIEISSLEQDNADI 983
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA------YDGSDKKLN---- 235
L A++ +G+ + A++G+ +L+ DP + G + Y+ S N
Sbjct: 984 WLTIAKLSENSGQFDEAMEGYNRVLKIDPANQDGLRGRIRVLVSQGRYEESLPDYNFLII 1043
Query: 236 ----EVEKRIEKAMERCKKEKKKS------------DLRDFKLLIAQIKVMES--KHSEA 277
+ +KA+ C + K D ++ K+L+ I ++ S + EA
Sbjct: 1044 QNPSDASLIADKAI-ACIRTGKPDEAIVLYNSALNLDKKNTKILMELIDLLTSLGRLEEA 1102
Query: 278 LRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMV 337
L VY+ L+ P + + +G+I +++ EA F R++ + E ++ +
Sbjct: 1103 LPVYDRLISLMPEETDLLISKGLILAGVKRHREA---VSCFNRVLAKKPGDPEIMLNLGI 1159
Query: 338 ATKIFGEK 345
+ GEK
Sbjct: 1160 SLLCLGEK 1167
>gi|355695674|gb|AES00089.1| intraflagellar transport 88-like protein [Mustela putorius furo]
Length = 785
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 730
>gi|322437663|ref|YP_004219753.1| hypothetical protein AciX9_3985 [Granulicella tundricola MP5ACTX9]
gi|321165556|gb|ADW71259.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
tundricola MP5ACTX9]
Length = 553
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 15/178 (8%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PND++ LQ L V +K K EA V ++++ ++P + L + +AA
Sbjct: 244 PNDLKGLQLLAAVDVKLSKWQEAKPVFEQILSIQPADDAALLGLGHCELALKNYQAAADL 303
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLN-----EVEKRI----EKAMERCKKEKKKSD 256
E +L++DP +V A+ L Y G + + E+ R+ + ++E +K+
Sbjct: 304 LERLLKQDPTQVLAHFYLARVYAGLGRTADAQHEAELHGRLLDQAASVVPTDEREVEKAT 363
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKE-EPRDFRPYLCQGIIYTLLRKKDEAEK 313
L + + L+ E + AL+++ + K PY+ G++Y + + ++AE+
Sbjct: 364 LVEARQLLT-----EGHEAAALKLFRDRAKGPTATPGAPYMLTGVVYLYMGRPEDAER 416
>gi|218662751|ref|ZP_03518681.1| O-linked GlcNAc transferase protein [Rhizobium etli IE4771]
Length = 309
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 98/260 (37%), Gaps = 18/260 (6%)
Query: 91 MRLPFHSIKPAIA-APVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDI 149
RL ++ PA+A A V A E+TN +T + EE + + ANP D
Sbjct: 32 WRLQKTALLPAVAMAAVFGLAGCETTN-TTDAVIRIDKAQGSEENIASLTAVINANPRDP 90
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEI 209
E + + +A++ + +++ P F+ +A V G+ + AI +
Sbjct: 91 EGYNVRGSAYGRGGQFRQALNDFNTALQINPRFFQAYANRALVYRNMGQQQQAIADYNAA 150
Query: 210 LRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQ 266
L+ +P AY G Y D N+ K I+ + + LI Q
Sbjct: 151 LQINPSYDVAYIGRGNVYRMAGQDDAAFNDFSKAIQLGTTDGRAYHNRG-------LIYQ 203
Query: 267 IKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+ + K A+ + + + P PY +GI Y L D A F F + N
Sbjct: 204 KRNQQDK---AIDDFSKAISLAPNSAEPYNGRGISYFALNDDDNA---FADFNHAIELNG 257
Query: 327 PYREYFVDNMVATKIFGEKV 346
E + + + + G+K
Sbjct: 258 NIAESWANQALVYERRGDKA 277
>gi|75910999|ref|YP_325295.1| hypothetical protein Ava_4803 [Anabaena variabilis ATCC 29413]
gi|75704724|gb|ABA24400.1| Tetratricopeptide TPR_3 [Anabaena variabilis ATCC 29413]
Length = 340
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 85/200 (42%), Gaps = 17/200 (8%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN--EFEWQLL 188
++ E Q L PN A L + + +L AV I L PN E + L
Sbjct: 37 WQGAENAFRQALQREPNLAMARAYLGNIYLMQNRLDVAVQEYGEAIRLNPNLGETYYNLG 96
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAME 246
A Q G+ E AI + + L DP RVEAY+ GLV+ G +++ I +
Sbjct: 97 LALQQQ--GKKEGAITAYRQALVIDPRRVEAYYNLGLVLYEQGL------LQEAIAAYQD 148
Query: 247 RCKKEKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
E K + + + + Q ME EA+ Y E++K +P++ Y G + +
Sbjct: 149 AINLEPSKVNAHHNLAIALQQTGKME----EAIVAYREVLKLDPQNAAAYSNLGSLMAMQ 204
Query: 306 RKKDEAEKQFEKFRRLVPRN 325
+ +EA + + R P+N
Sbjct: 205 GRPEEAIAAYTQAVRQDPKN 224
>gi|153008723|ref|YP_001369938.1| hypothetical protein Oant_1392 [Ochrobactrum anthropi ATCC 49188]
gi|151560611|gb|ABS14109.1| TPR repeat-containing protein [Ochrobactrum anthropi ATCC 49188]
Length = 301
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 86/209 (41%), Gaps = 18/209 (8%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
+ +NP D E KS + EA+ D+ I L PN ++ +A V Y G+S
Sbjct: 79 IQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQAYANRALVYRYMGDSTK 138
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKKKSDLRD 259
A++ + + ++ + AY G Y R+++A+ + + +D R
Sbjct: 139 AVQDYSKAIQLNSQYDAAYIGRGNVY--------RQAGRLDQALSDFNQAIALQTTDGRA 190
Query: 260 F--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+ + LI Q K +H +A+ + + + PY +GI Y L D A F+
Sbjct: 191 YHNRGLIYQAK---GQHKQAIEDFSKAISLNSTAPEPYNGRGISYVALGDYDNA---FDD 244
Query: 318 FRRLVPRNHPYREYFVDNMVATKIFGEKV 346
F + + E + + + + G+K
Sbjct: 245 FNTAITLDQNIAESWANQALVYEHNGDKA 273
>gi|374319874|ref|YP_005066374.1| Tetratricopeptide repeat-containing protein [Rickettsia slovaca
13-B]
gi|383751983|ref|YP_005427084.1| Tetratricopeptide repeat-containing protein [Rickettsia slovaca
str. D-CWPP]
gi|360042424|gb|AEV92806.1| Tetratricopeptide repeat-containing protein [Rickettsia slovaca
13-B]
gi|379774997|gb|AFD20353.1| Tetratricopeptide repeat-containing protein [Rickettsia slovaca
str. D-CWPP]
Length = 229
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
+A N N +A V I+ K A++ ++ IE++P+ KA++ + E
Sbjct: 61 IALNSNHFQAYLNKGAVLIQLGKYDLALEAYNKAIEVDPSHPYAYNNKAEILRKLEKYEL 120
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A++ + + + DP +AY +D +L E +E A +R + DL D+
Sbjct: 121 ALEAYNKAIEIDPNYSDAYFNKSKLFD----ELGNYEVALE-AYDRALTYRHDDDL-DYS 174
Query: 262 LLIAQIKVMES---KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+ I + S K+ A+++Y + ++ P DFR Y+ +GI+ +L+K + A K
Sbjct: 175 DIYYNIGTILSRLQKYDLAVKMYNKTIQLNPDDFRAYVNKGIVLGILKKYNLALK 229
>gi|423064909|ref|ZP_17053699.1| putative TPR repeat protein [Arthrospira platensis C1]
gi|406714152|gb|EKD09320.1| putative TPR repeat protein [Arthrospira platensis C1]
Length = 631
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 84/186 (45%), Gaps = 11/186 (5%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES 199
Q L PND + K QK +A+D DR I LE N +E + V S
Sbjct: 361 QALKIEPNDYAVWHNRGALLRKFQKYEQALDSYDRAIRLEANHYETWHNRGNVLSQLKRY 420
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
+ AI ++ ++ +P + + + A G D L + + E C ++ + ++
Sbjct: 421 QEAISSYDRAIQINPGQFD-----IWANRGMD--LCHIHQYSEAL--SCYEQAISLNSKE 471
Query: 260 FKLLIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+L I+Q V+ ++H EA+ Y+ + + + ++ +G I T L++ ++A +++
Sbjct: 472 PELWISQGGVLVKLARHEEAVICYDRAISLKSDSYEAWMGRGEILTALKQYEQALANWDR 531
Query: 318 FRRLVP 323
L P
Sbjct: 532 VIALQP 537
>gi|390335042|ref|XP_782701.2| PREDICTED: intraflagellar transport protein 88 homolog
[Strongylocentrotus purpuratus]
Length = 816
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I SQ + +A+ +R ++PN+ +WQL+ A +G + A++
Sbjct: 604 PSNIEIIEWLGAYFIDSQFVEKAIHYFERAAVIQPNQVKWQLMIASCHRRSGNYQQALET 663
Query: 206 FEEILRKDPLRVEAYHGLV 224
+++I +K P VE LV
Sbjct: 664 YKKIHKKFPDNVECLKFLV 682
>gi|186473462|ref|YP_001860804.1| hypothetical protein Bphy_4648 [Burkholderia phymatum STM815]
gi|184195794|gb|ACC73758.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
Length = 520
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 80/191 (41%), Gaps = 15/191 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE---LEPNEFEWQL 187
Y+E + L+ +PN EAL+ L V K A D R P +
Sbjct: 21 YDEAAALLNGILSIDPNHNEALEALGYVAAKQGDHARAADYALRAARPASTTPQQLH--- 77
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMER 247
A + AG A+ FE +L P E HG M+ + E E+ +++
Sbjct: 78 FAAHICQLAGRHADALVLFERVLAAFPDHAELLHGAAMSLVAT----GEHERALQRLARL 133
Query: 248 CKKEKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
++ + +++ + L+ Q++ ++ E L Y + + +P R Y+ G+ L
Sbjct: 134 AQRYPQSAEVHYNRGTLLGQME----RYDEELAAYRQAIALKPNFVRAYVNLGVALRDLH 189
Query: 307 KKDEAEKQFEK 317
+ DEA +QF+K
Sbjct: 190 RFDEALQQFKK 200
>gi|219685885|ref|ZP_03540691.1| tetratricopeptide repeat domain protein [Borrelia garinii Far04]
gi|219672584|gb|EED29617.1| tetratricopeptide repeat domain protein [Borrelia garinii Far04]
Length = 1179
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+I A+ L + ++ KL E++++I++ I L P + E+ LKA + AI
Sbjct: 969 PNEI-AIYNLSIAKFENNKLEESLEIINKAINLNPEKSEYLYLKASINLKNENYPNAISL 1027
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ ++ K+P AY L AY+ S K
Sbjct: 1028 YSSVIEKNPENTSAYINLAKAYEKSGNK 1055
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ ++ D+ ++ ++P + E + Q
Sbjct: 735 KDLNEFLKINPNDTYASKTLAQ----ANKIQQSEDLKSKVYSIKPTDLENPKTRQQ---- 786
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P A L AY+ + L +VE EK + ++
Sbjct: 787 ------AIKDLNEFLKINPNDTHASKTLAQAYENNGD-LPKVENVYEKIAKLTNAQEDY- 838
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+KL I + K+ + +HS + +++ ++ P+ + + +GI +L K +A + F
Sbjct: 839 ----YKLGIIRFKLKKYEHS--IGSFDQTIRLNPKHKKAHNNKGIALMMLNKNKKAVESF 892
Query: 316 EK 317
EK
Sbjct: 893 EK 894
>gi|442323117|ref|YP_007363138.1| FHA domain- TPR-repeat-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441490759|gb|AGC47454.1| FHA domain- TPR-repeat-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 616
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+Q V K+ +AL + E+ K++ + L GI L + DE K + KF L P
Sbjct: 536 SQALVKAGKYRDALNIAEQCAKKDTSNPDCQLLMGITKARLNEIDEGAKHYRKFLELAPA 595
Query: 325 NHPYR 329
NHPYR
Sbjct: 596 NHPYR 600
>gi|296126399|ref|YP_003633651.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296018215|gb|ADG71452.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
Length = 376
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 37/221 (16%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEV--RIKSQKLVEAVD------------------ 170
Y+E ++ ++ L NPN IEA + L E ++K L ++ D
Sbjct: 130 YDEAIEDYKKALELNPNYIEAKKALEEADRKLKEYNLNKSFDNYYIEGVNYYNKKQFEDA 189
Query: 171 --VIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD 228
+++ IEL+PN+ + L + Q G +E AIK F++ + DP + Y Y
Sbjct: 190 LKTLNKAIELDPNKAKAYLYRGVSQLVMGRNEEAIKDFDKAIELDPNYPKFY-----LYR 244
Query: 229 GSDKKL----NEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
G K L E K +KA+E K R K+ +K+ EA++ +++
Sbjct: 245 GHSKNLLKKYEEAVKDFDKAIELDSNYAKAYMYR------GVSKLGLNKYEEAIKDFDKT 298
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
++ P Y +G+ L + DE + F+K L P N
Sbjct: 299 IELNPNYIDAYYHRGLSKLGLNQNDEGIEDFDKIAELNPDN 339
>gi|296481738|tpg|DAA23853.1| TPA: intraflagellar transport 88 homolog [Bos taurus]
Length = 825
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 730
>gi|160707933|ref|NP_001104256.1| intraflagellar transport protein 88 homolog [Bos taurus]
Length = 825
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYAAKLKRLEK-MKEIREQRIKS 730
>gi|13324592|gb|AAK18799.1|AF305607_1 LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 852 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 910
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 911 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 941
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 621 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 672
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 673 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKITKLTNTQ 721
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 722 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 778
Query: 316 EK 317
EK
Sbjct: 779 EK 780
>gi|195941941|ref|ZP_03087323.1| surface-located membrane protein 1 [Borrelia burgdorferi 80a]
Length = 957
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 744 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 802
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 803 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 833
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 513 KDLNEFLKNNPNDARASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 564
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 565 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 613
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 614 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 670
Query: 316 EK 317
EK
Sbjct: 671 EK 672
>gi|13324588|gb|AAK18797.1|AF305605_1 LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 852 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 910
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 911 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 941
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 621 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 672
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 673 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 721
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 722 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 778
Query: 316 EK 317
EK
Sbjct: 779 EK 780
>gi|216264585|ref|ZP_03436577.1| FF domain protein [Borrelia burgdorferi 156a]
gi|215981058|gb|EEC21865.1| FF domain protein [Borrelia burgdorferi 156a]
Length = 1173
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 960 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 1018
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 1019 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 1049
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ + P + E + Q
Sbjct: 729 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVYSIRPIDLENTKSRQQ---- 780
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 781 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 829
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 830 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 886
Query: 316 EK 317
EK
Sbjct: 887 EK 888
>gi|13324580|gb|AAK18793.1|AF305601_1 LMP1 [Borrelia burgdorferi]
Length = 957
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 744 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 802
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 803 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 833
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 513 KDLNEFLKNNPNDARASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 564
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 565 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 613
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 614 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 670
Query: 316 EK 317
EK
Sbjct: 671 EK 672
>gi|407460219|ref|YP_006737994.1| hypothetical protein B603_0062 [Chlamydia psittaci WC]
gi|449070692|ref|YP_007437772.1| hypothetical protein AO9_00260 [Chlamydophila psittaci Mat116]
gi|405787267|gb|AFS26011.1| tetratricopeptide repeat family protein [Chlamydia psittaci WC]
gi|449039200|gb|AGE74624.1| hypothetical protein AO9_00260 [Chlamydophila psittaci Mat116]
Length = 335
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + K EA++ D+++EL+P + KA
Sbjct: 94 EEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKILELDPWNPQSLYNKAV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + + AI E +RK+PL +A+ + + Y L K+ +KA E ++
Sbjct: 154 VLTDMNNEQEAIALLETTVRKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 205
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + DL D + + K AL+ ++E + EE D Y+ G+ Y L++
Sbjct: 206 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAYMDLKQN 263
Query: 309 DEAEKQFEK 317
+A F +
Sbjct: 264 RQASDAFHR 272
>gi|440911858|gb|ELR61486.1| Intraflagellar transport protein 88-like protein, partial [Bos
grunniens mutus]
Length = 827
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 620 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 679
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 680 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 732
>gi|387827126|ref|YP_005806408.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi
N40]
gi|13324600|gb|AAK18803.1|AF305611_1 LMP1 [Borrelia burgdorferi N40]
gi|312149145|gb|ADQ29216.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi
N40]
Length = 849
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 636 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 694
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 695 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 725
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 405 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 456
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 457 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 505
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 506 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 562
Query: 316 EK 317
EK
Sbjct: 563 EK 564
>gi|359322789|ref|XP_534539.4| PREDICTED: intraflagellar transport protein 88 homolog [Canis lupus
familiaris]
Length = 825
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 730
>gi|383774716|ref|YP_005453785.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
gi|381362843|dbj|BAL79673.1| hypothetical protein S23_64920 [Bradyrhizobium sp. S23321]
Length = 461
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
++ + + +P D E+ + V ++L A+ D+ I+L+P++ + +
Sbjct: 129 DLSKAIELDPQDAESYELRGVVYTNQRRLDRALADYDQAIKLKPDDAQAWSDRGVTYYLG 188
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
G++E A++ E LR DP R +Y AY KKL +++K + E + + K +
Sbjct: 189 GDNEKAVRDLSEALRLDPNRPRSYTNRGAAY----KKLGQLDKAVADDGEAIRLDPKVPE 244
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR-DFRPYLCQGIIYTLLRKKDEAEKQF 315
D + L + M ++ +A+ Y++ ++ PR +F + +G Y L + A +
Sbjct: 245 YYDNRGL--SLAAM-GEYDKAIADYDQALRLAPRPNF--FTNRGDSYHLKGELGAALSDY 299
Query: 316 EKFRRLVPRNHPYREYFVDNMVATKIFGEK 345
E +L P + + + + V K GE+
Sbjct: 300 ESALKLDPN---FAQTYNNRAVLYKKMGER 326
>gi|218249734|ref|YP_002374735.1| hypothetical protein BbuZS7_0214 [Borrelia burgdorferi ZS7]
gi|218164922|gb|ACK74983.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi ZS7]
Length = 1004
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 798 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 856
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 857 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 887
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 567 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 618
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 619 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNAQ 667
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 668 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 724
Query: 316 EK 317
EK
Sbjct: 725 EK 726
>gi|426236519|ref|XP_004012215.1| PREDICTED: intraflagellar transport protein 88 homolog [Ovis aries]
Length = 825
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 730
>gi|375091078|ref|ZP_09737380.1| hypothetical protein HMPREF9709_00242 [Helcococcus kunzii ATCC
51366]
gi|374564505|gb|EHR35796.1| hypothetical protein HMPREF9709_00242 [Helcococcus kunzii ATCC
51366]
Length = 306
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
E+ A++ F+E+ R D + +A +G+ M+YD KLN+ EK +C ++ K D
Sbjct: 56 ENIKALEKFKEVYRLDSTKAQALYGIAMSYD----KLNDF-YNAEKYYLKCIEKDPKYD- 109
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
R F +A + ++ + A++ Y++ ++ P D+ + G IY + D+A + +K
Sbjct: 110 RAF-FFLANLYDIKKDYENAIKYYKKTLELSPDDYIAFNNLGAIYENINDFDKALEMLDK 168
Query: 318 FRRLVPRNHPYREYFVDNMVATKI 341
L N +R YF +V ++
Sbjct: 169 --ALDLNNQYFRPYFNKGVVYGRL 190
>gi|223889263|ref|ZP_03623851.1| hypothetical protein BBU64B_0217 [Borrelia burgdorferi 64b]
gi|223885296|gb|EEF56398.1| hypothetical protein BBU64B_0217 [Borrelia burgdorferi 64b]
Length = 1119
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 906 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 964
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 965 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 995
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 675 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVYSIKPIDLENTKSRQQ---- 726
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 727 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 775
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 776 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 832
Query: 316 EK 317
EK
Sbjct: 833 EK 834
>gi|226320951|ref|ZP_03796499.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi
29805]
gi|226233653|gb|EEH32386.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi
29805]
Length = 1065
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 852 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 910
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 911 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 941
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 621 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 672
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 673 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 721
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 722 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 778
Query: 316 EK 317
EK
Sbjct: 779 EK 780
>gi|196014404|ref|XP_002117061.1| hypothetical protein TRIADDRAFT_31864 [Trichoplax adhaerens]
gi|190580283|gb|EDV20367.1| hypothetical protein TRIADDRAFT_31864 [Trichoplax adhaerens]
Length = 456
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR---IEKAMER---------CK 249
++ F+ IL++DP V A +G A D KL E E+ + KA+E C
Sbjct: 58 SLDAFDPILKRDPTNVLARYGKAKALD----KLAEQERSNQLLHKAIENYHKVGEQRHCS 113
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
E +K+ L +A H +A+ V E+LVKE P D GI Y L+++
Sbjct: 114 VELRKAAY----LRLADRASFLGSHKKAMEVLEKLVKESPTDVNILNKLGIQYLLIKQNS 169
Query: 310 EAEKQFEKFRRLVP 323
+AE + K + P
Sbjct: 170 QAESTYRKVLEISP 183
>gi|20092504|ref|NP_618579.1| hypothetical protein MA3704 [Methanosarcina acetivorans C2A]
gi|19917772|gb|AAM07059.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1004
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 80/200 (40%), Gaps = 18/200 (9%)
Query: 133 EKEKEIEQHLAA-------NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW 185
E EK E+ L A NP D A Q + + EA++ ++ + +P+
Sbjct: 8 ESEKNFEKALEAFDALLEINPQDTIAWQYKGNILRYLDRPEEALEAFEKALAFDPDNVSA 67
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLVMAYDGSDKKLNEVEKRIEK 243
+ K Y E A++ FE +L KDP A Y GL + G K E +
Sbjct: 68 RYFKGLTLGYLNLPERALEAFERVLEKDPEHSGALYYSGLALNQLG---KHTEAASALSG 124
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
A+E + R L I K +EAL+ +EE + EP + + Y
Sbjct: 125 ALEINPENPGAWYYRGESLYIL------GKSAEALKAFEETLALEPSHAGAWEGKAKAYL 178
Query: 304 LLRKKDEAEKQFEKFRRLVP 323
L +K EA K EK +L P
Sbjct: 179 SLGRKREALKASEKALKLKP 198
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 9/191 (4%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K E+ LA P+ A + + + + EA+ ++ ++L+P+ E + ++
Sbjct: 154 KAFEETLALEPSHAGAWEGKAKAYLSLGRKREALKASEKALKLKPSSAEAWETQGKIMES 213
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE-KKK 254
G+ E A+ FE L +P+ G VM KL R E+A+E +
Sbjct: 214 IGKKEEALGAFERSLVLEPMNA----GNVM----EKGKLLGSLGRYEEALEAFESSLWMD 265
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
S L + K+ + + +AL + + ++E+P +F + G + K EA K
Sbjct: 266 SSLSEAKIKRGKTLLALGNFQQALDSFRKNLEEDPENFENWGGTGSCFLAFGKYYEAMKA 325
Query: 315 FEKFRRLVPRN 325
+EK + P N
Sbjct: 326 YEKALSIEPEN 336
>gi|13324596|gb|AAK18801.1|AF305609_1 LMP1 [Borrelia burgdorferi]
Length = 1173
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 960 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 1018
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 1019 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 1049
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ + P + E + Q
Sbjct: 729 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVYSIRPIDLENTKSRQQ---- 780
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 781 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 829
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 830 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 886
Query: 316 EK 317
EK
Sbjct: 887 EK 888
>gi|13324594|gb|AAK18800.1|AF305608_1 LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 852 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 910
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 911 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 941
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 621 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVYSIKPIDLENTKSRQQ---- 672
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 673 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 721
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 722 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 778
Query: 316 EK 317
EK
Sbjct: 779 EK 780
>gi|13324578|gb|AAK18792.1|AF305600_1 LMP1 [Borrelia burgdorferi]
gi|13324582|gb|AAK18794.1|AF305602_1 LMP1 [Borrelia burgdorferi]
gi|13324586|gb|AAK18796.1|AF305604_1 LMP1 [Borrelia burgdorferi]
gi|13324590|gb|AAK18798.1|AF305606_1 LMP1 [Borrelia burgdorferi]
Length = 1119
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 906 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 964
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 965 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 995
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 675 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 726
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 727 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 775
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 776 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 832
Query: 316 EK 317
EK
Sbjct: 833 EK 834
>gi|387825864|ref|YP_005805317.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi
JD1]
gi|312148550|gb|ADQ31209.1| Surface-located membrane protein 1 (LMP1) [Borrelia burgdorferi
JD1]
Length = 1065
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 852 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 910
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 911 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 941
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 621 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVYSIKPIDLENTKSRQQ---- 672
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 673 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 721
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 722 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 778
Query: 316 EK 317
EK
Sbjct: 779 EK 780
>gi|225548523|ref|ZP_03769571.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 94a]
gi|225370786|gb|EEH00221.1| tetratricopeptide repeat domain protein [Borrelia burgdorferi 94a]
Length = 1065
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 852 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 910
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 911 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 941
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 621 KDLNEFLKNNPNDAQASKTLAQ----ANKIQYLEDLKSKVYSIKPIDLENTKSRQQ---- 672
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 673 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 721
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 722 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 778
Query: 316 EK 317
EK
Sbjct: 779 EK 780
>gi|62184697|ref|YP_219482.1| hypothetical protein CAB050 [Chlamydophila abortus S26/3]
gi|407458848|ref|YP_006736951.1| hypothetical protein B602_0060 [Chlamydia psittaci M56]
gi|62147764|emb|CAH63508.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
gi|405785736|gb|AFS24481.1| tetratricopeptide repeat family protein [Chlamydia psittaci M56]
Length = 335
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + K EA++ D+++EL+P + KA
Sbjct: 94 EEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKILELDPWNPQSLYNKAV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + + AI E +RK+PL +A+ + + Y L K+ +KA E ++
Sbjct: 154 VLTDMNNEQEAIALLETTVRKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 205
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + DL D + + K AL+ ++E + EE D Y+ G+ Y L++
Sbjct: 206 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAYMDLKQN 263
Query: 309 DEAEKQFEK 317
+A F +
Sbjct: 264 RQASDAFHR 272
>gi|13324576|gb|AAK18791.1|AF305599_1 LMP1 [Borrelia burgdorferi]
Length = 849
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 636 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 694
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 695 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 725
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 405 KDLNEFLKNNPNDAQASKTLAQ----ANKIQHLEDLKSKVHSIKPIDLENTKSRQQ---- 456
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 457 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNTQ 505
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 506 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 562
Query: 316 EK 317
EK
Sbjct: 563 EK 564
>gi|168702109|ref|ZP_02734386.1| TPR repeat [Gemmata obscuriglobus UQM 2246]
Length = 489
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 129 VSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL 188
V+ +E ++ L A+P + AL + +L +A++ + I LEP+ L
Sbjct: 171 VTKDEAPAHWDRELKADPENTHALYMRGIGWREKGELDKALNDFNECIRLEPDFTSAYLS 230
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS---DKKLNEVEKRIEKAM 245
+ V S + AI + E++R+ P AY AY+ + DK L ++++ I
Sbjct: 231 RGNVLSDRRQFAKAIADYTEVIRRSPQSSLAYCNRGHAYNDTKEYDKALKDLDESI---- 286
Query: 246 ERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
R + L K + +H +A+ Y E ++ +PR PYL +G+ +
Sbjct: 287 -RLNPRYVPAHLTRGKAWYGK-----GEHDKAIANYTEALRLDPRYISPYLHRGLAWAAK 340
Query: 306 RKKDEAEKQFEKFRRLVPRN 325
+ D+A + RL P++
Sbjct: 341 GEHDKAIADYSAAVRLDPKS 360
>gi|13324598|gb|AAK18802.1|AF305610_1 LMP1 [Borrelia burgdorferi]
Length = 1179
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+I A+ L + ++ KL E++++I++ I L P + E+ LKA + AI
Sbjct: 969 PNEI-AIYNLSIAKFENNKLEESLEIINKAINLNPEKSEYLYLKASINLKNENYPNAISL 1027
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ ++ K+P AY L AY+ S K
Sbjct: 1028 YSSVIEKNPENTSAYINLAKAYEKSGNK 1055
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ ++ D+ ++ ++P + E + Q
Sbjct: 735 KDLNEFLKINPNDTYASKTLAQ----ANKIQQSEDLKSKVYSIKPTDLENPKTRQQ---- 786
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P A L AY+ + L +VE EK + ++
Sbjct: 787 ------AIKDLNEFLKINPNDTYASKTLAQAYENNGD-LPKVENVYEKIAKLTNAQEDY- 838
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+KL I + K+ + +HS + +++ ++ P+ + + +GI +L K +A + F
Sbjct: 839 ----YKLGIIRFKLKKYEHS--IGSFDQTIRLNPKHKKAHNNKGIALIMLNKNKKAVESF 892
Query: 316 EK 317
EK
Sbjct: 893 EK 894
>gi|190338004|gb|AAI62512.1| Intraflagellar transport 88 homolog [Danio rerio]
Length = 824
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I ++ L I +Q +A+ +R ++P + +WQL+ A +G + A++
Sbjct: 618 PSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALET 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAME 246
++EI RK P VE LV +D L EV+ K++EK E
Sbjct: 678 YKEIHRKFPENVECLRFLVRL--CTDMGLKEVQDYATKLKKVEKMKE 722
>gi|226321528|ref|ZP_03797054.1| FF domain protein [Borrelia burgdorferi Bol26]
gi|226232717|gb|EEH31470.1| FF domain protein [Borrelia burgdorferi Bol26]
Length = 1119
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E+++ I++ I+L P + E+ LKA + + A
Sbjct: 906 AKKPNEI-AIYNLSIAKFENNKLEESLETINKAIDLNPEKSEYLYLKASINLKKENYQNA 964
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I + ++ K+P AY L AY+ S K
Sbjct: 965 ISLYSLVIEKNPENTSAYINLAKAYEKSGNK 995
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND +A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 675 KDLNEFLKNNPNDAQASKTLAQ----ANKIQYLEDLKSKVYSIKPIDLENTKSRQQ---- 726
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L+ +P +A L AY+ + L + E A E+ K
Sbjct: 727 ------AIKDLNEFLKNNPNDAQASKTLAQAYENNGDLL-----KAENAYEKIIKLTNAQ 775
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ +KL I + K+ + +HS + +++ +K +P+ + +GI +L K +A + F
Sbjct: 776 E-DHYKLGIIRFKLKKYEHS--IESFDQTIKLDPKHKKALHNKGIALMMLNKNKKAIESF 832
Query: 316 EK 317
EK
Sbjct: 833 EK 834
>gi|51783969|ref|NP_001001725.1| intraflagellar transport protein 88 homolog [Danio rerio]
gi|45479854|gb|AAS66768.1| Ift88 [Danio rerio]
Length = 824
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I ++ L I +Q +A+ +R ++P + +WQL+ A +G + A++
Sbjct: 618 PSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALET 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAME 246
++EI RK P VE LV +D L EV+ K++EK E
Sbjct: 678 YKEIHRKFPENVECLRFLVRL--CTDMGLKEVQDYATKLKKVEKMKE 722
>gi|195953408|ref|YP_002121698.1| hypothetical protein HY04AAS1_1034 [Hydrogenobaculum sp. Y04AAS1]
gi|195933020|gb|ACG57720.1| Tetratricopeptide TPR_2 repeat protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 548
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+++EK E L + ++I AL+ L + K +A D+ +L EL N +Q A
Sbjct: 205 YQDEEKLYEDILKKDSSNISALERLGNLFFKLGLSYKASDIYKKLAELNKNNLNYQYQYA 264
Query: 191 QVQSYAGESEAAIKGFEEILRKDP----------LRVEAYHGLVMAYDGSDKKLNEVEKR 240
+ + A+ + +K P L +EA H V A + KKL +++K+
Sbjct: 265 LSLLQSMRYDKALSVLAPLYKKHPNNKPIAYLYGLTLEAAHKPVKALEVY-KKLLQIDKK 323
Query: 241 IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGI 300
K ER IA I + E K++EA+ E+ +K P + Y+ + I
Sbjct: 324 NPKLYER----------------IASILIDEGKYNEAMPYIEKGLKLNPLSSKLYIFKAI 367
Query: 301 IYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRE 349
I R A+ ++ +L +H YR YF+ M+ K+ ++D E
Sbjct: 368 IAASHRHYIMAKVYADQSIKL--NHHDYRSYFIRAMIEDKL--HQIDNE 412
>gi|407454868|ref|YP_006733759.1| hypothetical protein B598_0062 [Chlamydia psittaci GR9]
gi|405781411|gb|AFS20160.1| tetratricopeptide repeat family protein [Chlamydia psittaci GR9]
Length = 335
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + K EA++ D+++EL+P + KA
Sbjct: 94 EEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKILELDPWNPQSLYNKAV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + + AI E +RK+PL +A+ + + Y L K+ +KA E ++
Sbjct: 154 VLTDMNNEQEAIALLETTVRKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 205
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + DL D + + K AL+ ++E + EE D Y+ G+ Y L++
Sbjct: 206 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAYMDLKQN 263
Query: 309 DEAEKQFEK 317
+A F +
Sbjct: 264 RQASDAFHR 272
>gi|434398684|ref|YP_007132688.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428269781|gb|AFZ35722.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 495
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 95/184 (51%), Gaps = 3/184 (1%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L + P+ +EA + ++ ++ + A++ + + ++ +PN + AQ+ + E EA
Sbjct: 55 LESKPSLVEAYTHIGQLYVRESQWESAINCLKQALKYQPNSVQLYSTLAQIYNQLEEPEA 114
Query: 202 AIKGFEEILRKDPLRVEA--YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
++ + + + +P V A YH L A+ +K L+E ++A+E+ + + + +
Sbjct: 115 EMECWYQATQINPNLVNAGGYHKLAKAFYHRNK-LDEAINCYQRAIEQSEASETRQSNFE 173
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
+A+I + + K ++A+ Y++++ ++P R + G IY ++ +EA +F +
Sbjct: 174 PHYELAEIWLEQRKINQAVSCYQQILDQDPNQSRAHHKLGTIYLRQQQFEEAITEFRQTI 233
Query: 320 RLVP 323
++ P
Sbjct: 234 QIEP 237
>gi|359792297|ref|ZP_09295117.1| adenylate cyclase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251655|gb|EHK54993.1| adenylate cyclase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 506
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 128 DVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL 187
D S+ E + + + + +PN+ +A L ++ + + ++ E +D I + L P W
Sbjct: 355 DRSFAEADAQFARAIELDPNEADAWAALSDIAVLAGRIGEGLDHIRKAFRLNPYPASWYY 414
Query: 188 LK-AQVQSYAGESEAAIKGFEEILRKD 213
L Q Q AGE EAA+ E LR+D
Sbjct: 415 LTLGQAQYAAGEYEAAV----ETLRRD 437
>gi|406941717|gb|EKD74131.1| tetratricopeptide repeat family protein [uncultured bacterium]
Length = 537
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NPN+IE L L + + + +A+ + ++ +PN QL A V G A++
Sbjct: 34 NPNEIEVLHALGVLYTQQKNFTDAIYYLQIALKYQPNNPILQLHLANVFKMQGLYSQAVE 93
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
++ ++ +P + A + L Y + KL + + A+E K+SD D +
Sbjct: 94 ILQKSIQMNPHYIPALNNLGTVYY-AQGKLADAVRVYRLALE------KQSDYIDIYYNL 146
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
V ++ EA+ VY+ L++ P F G + K +A +QF
Sbjct: 147 GLALVKQNAFEEAVGVYQALLERSPEHFAARFHLGCVLMQQEKMTDALQQF 197
>gi|386853617|ref|YP_006202902.1| Lmp1 [Borrelia garinii BgVir]
gi|365193651|gb|AEW68549.1| Lmp1 [Borrelia garinii BgVir]
Length = 906
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E++++I++ + L P + E+ LKA + + A
Sbjct: 693 AKKPNEI-AIYNLSIAKFENNKLEESLEIINKALNLNPEKSEYLYLKASINLKNENYQNA 751
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGS 230
I + ++ K+P AY L AY+ S
Sbjct: 752 ISLYSSVIEKNPENTSAYINLAKAYEKS 779
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ ++ ++ ++ ++P E + Q
Sbjct: 462 KDLNEFLKINPNDTYASKTLAQ----ANKIQQSENLKSKIYSIKPTYLENPKNRQQ---- 513
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK-EKKK 254
AIK E L+ +P A L AY+ + L + E E+ K +
Sbjct: 514 ------AIKDLNEFLKINPNDTYASKTLAQAYENNGDLL-----KAENVYEKIAKLTNAQ 562
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
D +KL I + K+ + +HS + +++ ++ +P+ + + +GI +L K +A +
Sbjct: 563 EDY--YKLGIIRFKLKKYEHS--IGSFDQTIRLDPKHKKAHNNKGIALMMLNKNKKAVES 618
Query: 315 FEK 317
FEK
Sbjct: 619 FEK 621
>gi|338715235|ref|XP_001489102.3| PREDICTED: intraflagellar transport protein 88 homolog [Equus
caballus]
Length = 825
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 678 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 730
>gi|224150202|ref|XP_002336922.1| predicted protein [Populus trichocarpa]
gi|222837142|gb|EEE75521.1| predicted protein [Populus trichocarpa]
Length = 243
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD 213
L+++ ++ +L EA DVI R+ ++EPNEF W LL A +++ G E E++L+
Sbjct: 6 CLVDMFVRLGRLDEAFDVIKRM-DVEPNEFIWLLLIAGCRNH-GNEELGFYAAEQLLKLK 63
Query: 214 PLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDF 260
P E Y L+ Y S ++ +V + R KE+K L+D+
Sbjct: 64 PRSTETYVVLLNMYI-SAERWEDVS-----MVRRLMKEEKVGKLKDW 104
>gi|302036000|ref|YP_003796322.1| hypothetical protein NIDE0624 [Candidatus Nitrospira defluvii]
gi|300604064|emb|CBK40396.1| protein of unknown function, containing TPR repeats [Candidatus
Nitrospira defluvii]
Length = 399
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + +Q L P E L L +V + + +A V+ + +++ P E L A+
Sbjct: 132 DEAIQAYKQSLKLGPASAEILNDLADVYLAQGRGSDAEGVLRQALDIAPGNEEAHLDLAR 191
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD--GSDKKLNEVEKRIEKA----- 244
+ + A+K ++ +LR P EA + L YD G K E R+ +A
Sbjct: 192 LYEARHDRANALKMYQSLLRVRPDHAEALYHLASLYDSQGDLKLAREYLSRLTQANPGHA 251
Query: 245 -----MERCKKEKK---------------KSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
+ R + K+DL D + + + +EA R + E+
Sbjct: 252 DAWYLLGRLAERGNDLNAAAAAFKEAIAVKADLVDAHYNLGFVYRSQGLLAEAEREFLEV 311
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
++ P +L G++YT L + +EAEK+ E+ L P++
Sbjct: 312 IRYRPEYAEAHLNLGMVYTSLNRLEEAEKEHERAVALKPQS 352
>gi|113478145|ref|YP_724206.1| TPR repeat-containing serine/threonine protein kinase
[Trichodesmium erythraeum IMS101]
gi|110169193|gb|ABG53733.1| serine/threonine protein kinase with TPR repeats [Trichodesmium
erythraeum IMS101]
Length = 738
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES 199
Q + NPND++A + K A++ ++ +E++P++ + + + G
Sbjct: 509 QAIKLNPNDVKAYYYRGKSLFKMLDYQGAIENYNQFLEVKPDDADAYTNRCSAYLHKGND 568
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
+AI ++ + +P AYH L +AY L E ++ E +K +
Sbjct: 569 SSAIADCQQAIEINPQDFLAYHNLCIAY----FNLGEYQRATENCSIAIGIDKNNAKAYT 624
Query: 260 FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
+ L + EA++ + ++ P+D Y +G+I+++L+ ++A K F +
Sbjct: 625 NRALAQSAR---GYLQEAIKDFTTAIEINPQDDLNYSHRGMIFSVLKNYNQAIKDFSQAI 681
Query: 320 RLVPRN 325
RL N
Sbjct: 682 RLNSNN 687
>gi|331269789|ref|YP_004396281.1| hypothetical protein CbC4_1607 [Clostridium botulinum BKT015925]
gi|329126339|gb|AEB76284.1| tetratricopeptide repeat family protein [Clostridium botulinum
BKT015925]
Length = 308
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE---KKKSDL 257
+AIK +EEIL +P AY+GL + YD ++ E A+E KK K +
Sbjct: 62 SAIKKYEEILNINPNDERAYYGLAIIYDNKEE--------YEIAIEYYKKAITINPKYNR 113
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
F L A + K EA+ Y+E++ + +DF L G IY L + + A K F+K
Sbjct: 114 AHFFLAGAYDAI--GKKEEAINCYKEVLNMDEKDFWANLNLGSIYEELDENELAIKMFDK 171
Query: 318 FRRLVPRNH 326
+ P N+
Sbjct: 172 SISIDPYNY 180
>gi|428223876|ref|YP_007107973.1| hypothetical protein GEI7407_0420 [Geitlerinema sp. PCC 7407]
gi|427983777|gb|AFY64921.1| Tetratricopeptide TPR_1 repeat-containing protein [Geitlerinema sp.
PCC 7407]
Length = 273
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVM 225
A+ D+++ ++P ++E + G AI F E +R P V A+H G+V+
Sbjct: 26 AIAKYDKVLAVQPGDYEAWTHRGYALEKLGRYSEAIASFNEAIRAQPKFVLAWHGKGIVL 85
Query: 226 AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVME--SKHSEALRVYEE 283
A K+NE E I K+ E + + + D K+ K + + +A+ +++
Sbjct: 86 A------KMNEYEDAI-KSFEWALRFQPQ----DAKIWYNHGKALSHLCNYPDAIESFDK 134
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
++ P +++ + +GI T L + DEA F+
Sbjct: 135 TLELRPENYKAWYHRGIALTNLNRYDEAIASFD 167
>gi|408670837|ref|YP_006870908.1| surface-located membrane protein 1 [Borrelia garinii NMJW1]
gi|407240659|gb|AFT83542.1| surface-located membrane protein 1 [Borrelia garinii NMJW1]
Length = 906
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E++++I++ + L P + E+ LKA + + A
Sbjct: 693 AKKPNEI-AIYNLSIAKFENNKLEESLEIINKALNLNPEKSEYLYLKASINLKNENYQNA 751
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGS 230
I + ++ K+P AY L AY+ S
Sbjct: 752 ISLYSSVIEKNPENTSAYINLAKAYEKS 779
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ ++ D+ ++ ++P + E + Q
Sbjct: 462 KDLNKFLKINPNDTYASKTLAQ----ANKIQQSEDLKSKIYSIKPTDLENPKNRQQ---- 513
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK-EKKK 254
AIK E L+ +P A L AY+ + L + E E+ K +
Sbjct: 514 ------AIKDLNEFLKINPNDTYASKTLAQAYENNGDLL-----KAENVYEKIAKLTNAQ 562
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
D +KL I + K+ + +HS + +++ ++ P+ + + +GI +L K +A +
Sbjct: 563 EDY--YKLGIIRFKLKQYEHS--IGSFDQTIRLNPKHKKAHNNKGIALMMLNKNKKAVES 618
Query: 315 FEK 317
FEK
Sbjct: 619 FEK 621
>gi|395848202|ref|XP_003796745.1| PREDICTED: intraflagellar transport protein 88 homolog [Otolemur
garnettii]
Length = 806
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 599 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 658
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 659 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 711
>gi|428301458|ref|YP_007139764.1| serine/threonine protein kinase [Calothrix sp. PCC 6303]
gi|428238002|gb|AFZ03792.1| serine/threonine protein kinase with TPR repeats [Calothrix sp. PCC
6303]
Length = 708
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/202 (18%), Positives = 90/202 (44%), Gaps = 9/202 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E I++ LA+ +D EA + + ++ EA+ D+ IE + + ++ KA
Sbjct: 417 YNEAIASIDKTLASQNDDAEAWEIKADSLDSLKRYDEAIQAYDKAIENQADYYQAWYKKA 476
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+V + A+ +++ L P +A++ L + + + A +
Sbjct: 477 KVFQGLKRYQDAVTAYDKTLELKPNYADAFY-------SKGNSLVNLNRYQDAANAYDQT 529
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
K K D L ++ ++ EAL +++++K P ++ + +G++ L++ D
Sbjct: 530 VKIKPDYYQAWLSKGNTLIILQRYQEALEAFDQVIKYNPSSYQAWYSRGLMMHQLQRYDT 589
Query: 311 AEKQFEKFRRLVPRNHPYREYF 332
A + ++K + R + Y+ ++
Sbjct: 590 AIESYDK--AIALRGNAYQTWY 609
>gi|124486270|ref|YP_001030886.1| hypothetical protein Mlab_1454 [Methanocorpusculum labreanum Z]
gi|124363811|gb|ABN07619.1| Tetratricopeptide TPR_2 repeat protein [Methanocorpusculum
labreanum Z]
Length = 240
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 134 KEKE-IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
K KE +E L++ P+D L+ + I+S+ + I++++ L+PN+ E LK
Sbjct: 144 KAKETMETGLSSVPDDGRLLKLQANLLIRSEDFEAGLASIEKVLLLDPNDAESWSLKGAA 203
Query: 193 QSYAGESEAAIKGFEEILRKDP 214
+Y G E AI FE+ ++ DP
Sbjct: 204 SAYLGRKEDAISAFEQAMKLDP 225
>gi|147679195|ref|YP_001213410.1| hypothetical protein PTH_2860 [Pelotomaculum thermopropionicum SI]
gi|146275292|dbj|BAF61041.1| hypothetical protein PTH_2860 [Pelotomaculum thermopropionicum SI]
Length = 196
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 90 FMRLPFHSIKPAIA----APVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAAN 145
F + F +I IA P+A + + +D A + + EEK ++E N
Sbjct: 12 FQKAVFITITVLIAIGLVVPLAGLFQSQPGGMAGQDAGPAGQQ-TLEEKLADLEAKAREN 70
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P D L L E+ + AV ++++ L+P + +L A ++ + + AI
Sbjct: 71 PGDRVLLMELAELYRYTGNPDRAVKTYEQVLTLDPGNSQARLGIAVTYYFSSKYDLAIAQ 130
Query: 206 FEEILRKDPLRVEAY--HGLVMAYDGSD--KKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
+E+LR+DP EA+ +G V+A D + E+EK I A E EK + + ++K
Sbjct: 131 LQELLRRDPDNKEAHQLYGYVLAIGKKDYATAIQELEKFISLAKEGPDVEKARQAINEWK 190
>gi|435850371|ref|YP_007311957.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433661001|gb|AGB48427.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 504
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 43/194 (22%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
EA+ V D+ IE+EP + + K + G++E AI+ F++ ++ DPL E ++
Sbjct: 250 EAIRVCDQAIEIEPQDAKAWNYKGYALNEMGKNEEAIQAFDKAIQLDPLDAEIWY----- 304
Query: 227 YDGSDKKLNEVEKRIEKAMERCKK-------------EKKKS--DLRDFKLLIAQI-KVM 270
Y G+ L E+ K EKA+E K +K ++ ++ +++ I KV+
Sbjct: 305 YKGT--ALYEM-KEYEKALENLNKATEINPQYAEAWNDKGRAHYNINEYENAIQAFDKVI 361
Query: 271 E-------------------SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
E +++ EA++ Y++ ++ P++ ++ +G + K +EA
Sbjct: 362 ELEPQNDAAWDSKGNSLRRMAEYDEAIQAYDKAIELNPQNSWTWMHKGYTLYGMGKLEEA 421
Query: 312 EKQFEKFRRLVPRN 325
E+ F+K L P N
Sbjct: 422 EQVFDKVIELNPEN 435
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 13/158 (8%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH- 221
+K E+++ D+ IEL P + K S G++E AI+ +++ ++ P V+ +
Sbjct: 42 EKYSESIEAFDKAIELNPQNADAWAGKGMALSETGKNEEAIQAYDKAIQLKPNNVKFWSE 101
Query: 222 -GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVME-SKHSEALR 279
G+ + +K+ R E+A++ K + L F I + K+ EA++
Sbjct: 102 KGIAL------RKMG----RYEEAIQAYDKAIELDPLDGFAWYNKGIALFHIKKYEEAIQ 151
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y+E + EPR + +G + ++ +EA + F+K
Sbjct: 152 AYDEATELEPRFAMAWYNKGYVLYYTKRYEEAIQAFDK 189
>gi|256810144|ref|YP_003127513.1| hypothetical protein Mefer_0174 [Methanocaldococcus fervens AG86]
gi|256793344|gb|ACV24013.1| TPR repeat-containing protein [Methanocaldococcus fervens AG86]
Length = 312
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP+D+ + V + K EA + D ++E P F L+K ++ G+ + A++
Sbjct: 107 NPSDLVCKYIIAYVLKRLGKYSEAQKIFDDVVERHPQAFIAWLMKGKLLHREGKLKKALE 166
Query: 205 GFEEILRKDPLRVE-AYH-GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
FE+ L +P E YH G ++ G + +A+E K +K+D RD
Sbjct: 167 CFEKALEINPKDYELLYHKGEILLKLG----------KYCEALECFKVLHEKND-RDISS 215
Query: 263 L--IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
L I +I V+ + SEA E+ +K P D Y GII L + +EA K F+K
Sbjct: 216 LMHIIEILVLLGRISEAREYVEKALKLNPDDPMIYFFYGIILNKLGRYEEAIKYFDKALE 275
Query: 321 LVPRNHP 327
L P N P
Sbjct: 276 LNP-NFP 281
>gi|145538506|ref|XP_001454953.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422741|emb|CAK87556.1| unnamed protein product [Paramecium tetraurelia]
Length = 619
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
+K EA++ + I++ P E + ++A A + AI+ FE ++K+P Y
Sbjct: 318 KKYNEALESYNHAIQINPEESNYFFIRANALVEANRFQEAIENFENAIQKNPENSSYYFN 377
Query: 223 LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK-HSEALRVY 281
A K +E K+++ A+ K S+ D+ L I + E K + EAL
Sbjct: 378 KAQAL-CQIHKYDEALKQLDFAIS------KNSNNPDY-LAQKAITLCEMKRYFEALECI 429
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPY 328
EE +K+ P++ Y +G + LL++ +EA K ++ + PRN Y
Sbjct: 430 EEAIKKYPQESIGYFNKGNVLLLLKRYEEALKHYDYAIQKNPRNSQY 476
>gi|410947119|ref|XP_003980301.1| PREDICTED: intraflagellar transport protein 88 homolog [Felis
catus]
Length = 825
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P++ +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPSQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAME 246
+++I RK P VE LV +D L EV+ KR+EK E
Sbjct: 678 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEKMKE 722
>gi|406981273|gb|EKE02771.1| hypothetical protein ACD_20C00335G0002 [uncultured bacterium]
Length = 553
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 7/201 (3%)
Query: 117 ESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLI 176
E+ + E+ ++E E+ + L NPN+ AL L + + A+ +++ I
Sbjct: 6 ETLNLAIKSHEEGNFEGAERLYREILEQNPNNDTALYCLGIMARQLGHYAAAISYLNKAI 65
Query: 177 ELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE 236
E+ PN FE+ + E A++ ++++L +P +E H L + Y ++
Sbjct: 66 EINPN-FEYYKDLGNIYFDLSRGEEAVECYKKVLEINPDDIEINHNLGLIY----QETGY 120
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
+++ I+ + K + +L + + A+ ++ + +P Y
Sbjct: 121 IDEAIQCFLNVIS--INKDEYETLNILGSLYFNHKRDIINAINCLDKAILAKPDYADAYF 178
Query: 297 CQGIIYTLLRKKDEAEKQFEK 317
GI+Y ++K DEA K +EK
Sbjct: 179 NLGIMYNWIQKTDEAIKSYEK 199
>gi|425442275|ref|ZP_18822529.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9717]
gi|389716789|emb|CCH99016.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9717]
Length = 707
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 33/224 (14%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ--LLKAQVQSYAG 197
Q L NP+ +EALQ + + ++ EA++ ++ I++ P+ WQ L + Q G
Sbjct: 357 QALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDS-AWQAWLGRGQALDKLG 415
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGL------VMAYDGSDKKLNEVEK-RIEKAMERCKK 250
+++ A++ FE +L +P +A+ G + Y + K L+++ + A KK
Sbjct: 416 KNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKK 475
Query: 251 EKKKSDLRDFKLLIA---QIKVMES-----------------KHSEALRVYEELVKEEPR 290
++ D++ + Q +ES K ++AL Y + + P+
Sbjct: 476 GWSLQNIEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQ 535
Query: 291 DFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+ + QGII L +K EA E F + N Y + +++
Sbjct: 536 FSQAHYSQGIILQKLDRKSEA---LEAFTQATKANSNYYQAWLN 576
>gi|197118892|ref|YP_002139319.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197088252|gb|ACH39523.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 265
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKEK 252
+GE A++ F+ + +P E Y L AY +D + ++K +E A E
Sbjct: 18 SGEYVQAVEAFKGCISLEPENAEGYFYLGEAYSEQGKADDAIAALKKGLELAPE------ 71
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
DL D + + KH +AL Y ++ + +P++ Y+ G++Y + + ++A
Sbjct: 72 ---DL-DGITALGDVYFESGKHKDALGCYRKVTELQPKECDGYVSMGLVYNAMERTEDAL 127
Query: 313 KQFEKFRRLVPRN 325
K F+K L P+N
Sbjct: 128 KSFQKALELDPKN 140
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 14/191 (7%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+++ L P D++ + L +V +S K +A+ ++ EL+P E + + V +
Sbjct: 62 LKKGLELAPEDLDGITALGDVYFESGKHKDALGCYRKVTELQPKECDGYVSMGLVYNAME 121
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+E A+K F++ L DP V A + + Y G L E EK IE + + + +
Sbjct: 122 RTEDALKSFQKALELDPKNVFALNAMGDLYYG----LGENEKAIEAYHKGIEIDPADATA 177
Query: 258 RDFKL--LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
R F L L + +ES E L E V+ +P YL G I + EA K F
Sbjct: 178 R-FNLGELYYDMDDLESAERETL----EAVRLDPDFTMSYLTLGNICIDQDRTQEAIKYF 232
Query: 316 EKFRRLVPRNH 326
E + + R H
Sbjct: 233 ESY---LAREH 240
>gi|333987252|ref|YP_004519859.1| hypothetical protein MSWAN_1037 [Methanobacterium sp. SWAN-1]
gi|333825396|gb|AEG18058.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 369
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD 231
D+ +++ PN + +A V E A++ ++ L+ DP VEA+ G MA+ G D
Sbjct: 140 FDKALKINPNFVDAWNDRAMVSLRLNRYEEALEYYDNALKVDPQNVEAFMGKYMAFMGLD 199
Query: 232 KKLNEVEKRIEKAMERCKKEKKKSDLRDFK-LLIAQIKVMESKHSEALRVYEELVKEEPR 290
K +E ++K +E E + + L + +L+ Q+ ++ EALR +++K +P+
Sbjct: 200 KYPESLE-YLDKVLEI---ESQHTSLWASRGILLNQL----GRYEEALRCSNKVLKLDPK 251
Query: 291 DFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+ R + +G L++ +EA K E+ +L P+
Sbjct: 252 EPRAWKTKGKSLVELKRPEEALKSLEEALKLDPK 285
>gi|225850059|ref|YP_002730293.1| hypothetical protein PERMA_0503 [Persephonella marina EX-H1]
gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
Length = 559
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 27/224 (12%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ 186
+D ++E EK + L +PND+EAL L +V +++ + +A ++I+R+++++P+ +
Sbjct: 210 QDRKFKEAEKVYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRIVKIDPSNKDAL 269
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK------------KL 234
L K + + E I+ EE+ +++P L MAY+ + + KL
Sbjct: 270 LKKFLLYLRENKGEEIIRELEELAKEEPDNPTVLSILGMAYESAQRYKKAEEIYLKVLKL 329
Query: 235 ----NEVEKRIEKAMERCKKEKKKSDL---------RDFK--LLIAQIKVMESKHSEALR 279
+E+ +R+ + R + +K D+ RD++ L++A I+ AL
Sbjct: 330 EPENSEILERLAEVYTRTGQYEKALDVLNRLYSLDPRDYRVLLIMADIENKRGNLDAALS 389
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+E +D Y +GI Y L + D+AE+ F+K L P
Sbjct: 390 YIQEAKSINDKDPTIYFFEGIYYEKLDQWDKAEEAFKKALELRP 433
>gi|328947737|ref|YP_004365074.1| hypothetical protein Tresu_0849 [Treponema succinifaciens DSM 2489]
gi|328448061|gb|AEB13777.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
succinifaciens DSM 2489]
Length = 887
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
I S+ +A + L++ +P E + +G+ E A+ F EI+R D VEA
Sbjct: 19 ILSRDFEQAARIYKGLLKSDPQNIELLSSLGNLYVKSGDDEKALAYFSEIIRIDSKNVEA 78
Query: 220 YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALR 279
+ L Y ++L + + I +E+ +S+++ F L K+M K+ +AL
Sbjct: 79 LNSLGGIY----RRLKKYDDSI-SVLEQAVI-SDESNVQSFYNLGFTFKLM-GKYDDALN 131
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP 327
+ +V+E P D + G IY L + +A + + ++ P NHP
Sbjct: 132 CFNRVVEENPEDVLAFNHIGSIYALKNQNKDAVSSYLRGLKIDP-NHP 178
>gi|118381868|ref|XP_001024094.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89305861|gb|EAS03849.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 850
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 86/181 (47%), Gaps = 18/181 (9%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLV 224
+A+ D+ I L+PN L + + G+ + A++ F +I+ DP AY GL
Sbjct: 157 QALTYYDKAINLDPNYKNAYLNRGLLYMNEGQKQQALQDFRQIIAIDPKFTNAYINVGLT 216
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK--LLIAQIKVMESKHSEALRVYE 282
+ G ++ E + +KA++ K + L + +L Q+ K+ EAL Y
Sbjct: 217 LQQLGQNQ---EAIQHYDKAIQI----DKNAFLAYYNKAILCKQL----GKNQEALNNYN 265
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIF 342
++++ P YL +G ++ K +EA K ++K +L P NH ++ + + ++ K
Sbjct: 266 KVIEINPNYSNAYLNKGSLFLFSGKYEEAIKNYDKVIQLDP-NH--KQVYYNKGISLKAL 322
Query: 343 G 343
G
Sbjct: 323 G 323
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
EA++ +++IE+ PN L K + ++G+ E AIK ++++++ DP + Y+ +
Sbjct: 259 EALNNYNKVIEINPNYSNAYLNKGSLFLFSGKYEEAIKNYDKVIQLDPNHKQVYYNKGI- 317
Query: 227 YDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES--KHSEALRVYEEL 284
S K L ++ IE + + + +++ K L +E+ K +AL Y +
Sbjct: 318 ---SLKALGRYQESIENYNKAIQLDPNNCKIQNNKGL-----ALEALGKSQDALDCYNKA 369
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++ +P Y + ++ L KD+A + ++ +L+ + H
Sbjct: 370 IQIDPFFTLSYANRALVNFNLGNKDQAVEDMKQASKLLEQGH 411
>gi|406592975|ref|YP_006740154.1| hypothetical protein B712_0060 [Chlamydia psittaci NJ1]
gi|405788847|gb|AFS27589.1| tetratricopeptide repeat family protein [Chlamydia psittaci NJ1]
Length = 335
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + K EA++ D+++EL+P + KA
Sbjct: 94 EEAVEQYRAYIVLHPDDAECWFSLGGVYHRLGKYTEAIECFDKILELDPWNPQSLYNKAV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + + AI E +RK+PL +A+ + + Y L K+ +KA E ++
Sbjct: 154 VLTDMNNEKEAIALLETTVRKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 205
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + DL D + + K AL+ ++E + EE D Y+ G+ Y L++
Sbjct: 206 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAYMDLKQN 263
Query: 309 DEAEKQFEK 317
+A F +
Sbjct: 264 RQASDAFHR 272
>gi|115471575|ref|NP_001059386.1| Os07g0287100 [Oryza sativa Japonica Group]
gi|113610922|dbj|BAF21300.1| Os07g0287100, partial [Oryza sativa Japonica Group]
Length = 118
Score = 44.3 bits (103), Expect = 0.093, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%)
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
DL LL+ + S+A+ VYE L+ E P DFR YL +GII K EAE+ F
Sbjct: 38 DLIQVDLLLGKAYSDWGHISDAVAVYENLITEHPEDFRGYLAKGIILKENGKSGEAERMF 97
Query: 316 EKFRRLVP 323
+ + P
Sbjct: 98 IQAKFFAP 105
>gi|225620899|ref|YP_002722157.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215719|gb|ACN84453.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 952
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE----FEWQ 186
YEE + + + NP ++E+ + K +K EA+ + I+L PN+ F
Sbjct: 297 YEESIVDFNEVIKLNPKNVESYFNRGVSKAKLEKYEEAIADFNNAIKLNPNDEKVYFASG 356
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLVMA----YDGSDKKLNE---- 236
L KA ++ Y E +I F E+++ + VEA Y G+ A Y+ S NE
Sbjct: 357 LAKADLERY----EESIVDFNEVIKLNSKNVEAYFYRGVAKADLERYEESIVDFNEVIKL 412
Query: 237 ----VEKRIEKAMERCKKEKKKSDLRDFKLLI-------------AQIKVMESKHSEALR 279
VE + + + K EK + + DF +I K ++ +A+
Sbjct: 413 DPKNVEAYFYRGVSKAKLEKYEESIIDFNEVITFNPNDEKAYFNRGLSKAQLERYKKAIV 472
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ +++K P++ YL +GI L+K +EA F K +L P N
Sbjct: 473 DFNKVIKLNPKNEIAYLARGISNYELKKYEEAIVDFNKAIKLNPNN 518
>gi|442319217|ref|YP_007359238.1| hypothetical protein MYSTI_02232 [Myxococcus stipitatus DSM 14675]
gi|441486859|gb|AGC43554.1| hypothetical protein MYSTI_02232 [Myxococcus stipitatus DSM 14675]
Length = 1546
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
GE + AI FEE L+ DP R + AY + + N+ +R +KA+ K +
Sbjct: 1410 GEFDEAISAFEESLKSDPRRTRVLGSIGDAYFNA-ARWNDAIQRYQKAL------KADTK 1462
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L +A+ +++H++A+ Y + EP + Y G Y K+ EA + FE
Sbjct: 1463 LTYVYYKVARAFTEQAQHAKAIDWYRKAATAEPENPMTYYYLGFAYKEKNKRREAVQAFE 1522
Query: 317 KF 318
+
Sbjct: 1523 SY 1524
>gi|223940216|ref|ZP_03632076.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
gi|223891103|gb|EEF57604.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
Length = 644
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
++E EK ++Q L+ + ND L L V+ + +K EA+D + R +L+P E Q
Sbjct: 505 FDEAEKNLKQALSVDSNDAYCLSILGRVKFQEEKYDEALDALSRAAQLDPQNAETQNYLG 564
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
S+ G A + ++ DP A++ L + Y
Sbjct: 565 ITLSHKGLRGPAETALRKAIQLDPGYGSAHNNLAVVY 601
>gi|429123311|ref|ZP_19183844.1| TPR domain-containing protein [Brachyspira hampsonii 30446]
gi|426280911|gb|EKV57915.1| TPR domain-containing protein [Brachyspira hampsonii 30446]
Length = 493
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP + + L E+ + ++ +A+++ ++ IE+ PN+F + + A + Y E + A++
Sbjct: 305 NPENNQYYYYLSELYKEIEEYNKAIELYNQAIEVNPNDFSYYISIAALYEYIKEYDKAVE 364
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR---IEKAMERCKKEKKKSDLRDFK 261
++ + D +EAY L Y +KL +E+R +KA+E KE D
Sbjct: 365 MLKKAIENDSDNIEAYIALGDLY----EKLGSIEERNDAYKKAIEIYNKEDDAYSFEDIG 420
Query: 262 LLIAQIKVMESK---HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
L ++ +E + + +A+ +Y E +D Q +Y L K+ A ++K
Sbjct: 421 NLYEKLGDIEKRNDAYKKAIEIY-----NETQDIYHLEKQADLYIKLNDKNNAINSYKKL 475
Query: 319 RRLVPRNH 326
+ P N+
Sbjct: 476 LEIDPYNN 483
>gi|378763071|ref|YP_005191687.1| adenylate cyclase [Sinorhizobium fredii HH103]
gi|365182699|emb|CCE99548.1| adenylate cyclase [Sinorhizobium fredii HH103]
Length = 724
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 93/195 (47%), Gaps = 23/195 (11%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+YE + +E NP A L +++ ++ EA+ + + + L+PN E +L
Sbjct: 429 AYEAAGRGLE----LNPQSPRAYAVLGILQMFDGEIDEAIASVKKAVALDPNGAEAELNL 484
Query: 190 AQVQSYAGESEAAIKGFEEILRKDP---LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
A V +YAG++ A+ E +L DP +V Y+GLV+ + R E+A+
Sbjct: 485 AIVLTYAGQNPEALAAMERVLELDPKPRAQVYDYYGLVL----------YMNHRYEEAIR 534
Query: 247 --RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTL 304
R + ++ SDL L +A ++ + +EA + E +++ P L ++Y+
Sbjct: 535 AVRTVRPEEPSDLGLETLAMANARL--GRMAEAHKAVEAILERSPSQSLATLR--VLYSH 590
Query: 305 LRKKDEAEKQFEKFR 319
R++++ + + + R
Sbjct: 591 HRRQEDLDHRLDALR 605
>gi|324508953|gb|ADY43775.1| Intraflagellar transport protein 88 [Ascaris suum]
Length = 598
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I ++ L I +Q +AV+ ++ +EPNE +WQL+ A Q +G + A+
Sbjct: 389 PSNIGVIEWLGAYYIDAQFPEKAVNYFEKASIMEPNEIKWQLMMASCQRRSGNYQKALDL 448
Query: 206 FEEILRKDPLRVEAYHGLV 224
+ +I R+ P +E LV
Sbjct: 449 YRQIHRRFPENIECLKFLV 467
>gi|224532142|ref|ZP_03672774.1| tetratricopeptide repeat domain protein [Borrelia valaisiana VS116]
gi|224511607|gb|EEF82013.1| tetratricopeptide repeat domain protein [Borrelia valaisiana VS116]
Length = 1011
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NPN+I A+ L + ++ K E+++ I++ I L P + E+ LKA + + AI
Sbjct: 800 NPNEI-AIYNLSIAKFENNKFEESLETINKAINLNPEKIEYLYLKASINLKNKNYQNAIS 858
Query: 205 GFEEILRKDPLRVEAYHGLVMAYD 228
+ ++ K+P AY L AY+
Sbjct: 859 LYNLVIAKNPENTSAYINLAKAYE 882
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ D+ ++ ++P + E + Q
Sbjct: 567 KDLNEFLTINPNDAHASKTLAQ----ANKIQHLEDLKSKVYSIKPIDLENPKTRQQ---- 618
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK-EKKK 254
AIK E L +P A L AY+ + L + E E+ K K
Sbjct: 619 ------AIKDLNEFLTINPNDAHASKTLAQAYENNGDLL-----KAENVYEKITKLANTK 667
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
D +KL I + K+ + +HS + +++ ++ +P+ + + +GI +L + +A +
Sbjct: 668 EDY--YKLGIIRFKLKKFEHS--IESFDQTIRLDPKHKKAHNNKGIALMMLNQNKKAIES 723
Query: 315 FEK 317
FEK
Sbjct: 724 FEK 726
>gi|291190309|ref|NP_001167232.1| intraflagellar transport protein 88 homolog [Salmo salar]
gi|223648786|gb|ACN11151.1| Intraflagellar transport protein 88 homolog [Salmo salar]
Length = 845
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I+ ++ L I +Q +A+ +R ++P + +WQL+ A +G + A++
Sbjct: 616 PSNIDVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALET 675
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P +E LV +D + EV+ K++EK M+ ++++ KS
Sbjct: 676 YKDIHRKFPENIECLRFLVRL--CTDMGMKEVQDYATKLKKVEK-MKEIREQRVKS 728
>gi|76811375|ref|YP_334393.1| hypothetical protein BURPS1710b_3015 [Burkholderia pseudomallei
1710b]
gi|76580828|gb|ABA50303.1| TPR domain protein [Burkholderia pseudomallei 1710b]
Length = 626
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 30 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 89
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 90 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 148
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 149 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 202
Query: 312 EKQF 315
F
Sbjct: 203 IAHF 206
>gi|418935756|ref|ZP_13489515.1| Tetratricopeptide TPR_1 repeat-containing protein [Rhizobium sp.
PDO1-076]
gi|375057548|gb|EHS53713.1| Tetratricopeptide TPR_1 repeat-containing protein [Rhizobium sp.
PDO1-076]
Length = 287
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 12/269 (4%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKE 137
+T TV + AL R + A+ A ++ A +TNEST T R S EE
Sbjct: 1 MTETTVFSTALTADRKRRYVSAAAVIALLSLAGCA-TTNESTDVITLDRAQGS-EENIAS 58
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+ + +NP D E +S A+D + ++L P+ ++ +A V G
Sbjct: 59 LSSVIQSNPRDPEGYNVRGSAYGRSGDFKRAIDDFNTALQLNPSFYQAYANRALVYRNMG 118
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+ A + L+ +P AY G Y + +++E +A++ + +
Sbjct: 119 KPVEAAADYNAALKINPNYDVAYIGRGNIYRQA-GRVDEAFGDFNRAIQLDTTDGRAYHN 177
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
R LI Q++ H++A+ + + + PR PY +G+ Y ++ E F
Sbjct: 178 RG---LIYQLR---GDHAKAIDDFSKAISMSPRAPEPYNGRGVSYV---AQNNDENAFAD 228
Query: 318 FRRLVPRNHPYREYFVDNMVATKIFGEKV 346
F + N+ E + + + + G+K
Sbjct: 229 FNLAIELNNKLAESWANQALIYERRGDKA 257
>gi|414075408|ref|YP_006994726.1| TPR repeat domain-containing protein [Anabaena sp. 90]
gi|413968824|gb|AFW92913.1| TPR repeat domain-containing protein [Anabaena sp. 90]
Length = 755
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 14/226 (6%)
Query: 107 AAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIE-------ALQTLMEVR 159
A AA E+ + KD T+ +K++++ +AA IE A L
Sbjct: 219 AVAAYQEAIKLNPKDATAYNNLGIALSDQKKLDEAVAAYQKAIELDPKYATAYYNLGNAL 278
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
+KL EAV + IEL+P S + + A+ +++ + DP A
Sbjct: 279 SDQKKLDEAVAAYQKAIELDPKYATAYYNLGNALSDQKKLDEAVAAYQKAIELDPKYATA 338
Query: 220 YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALR 279
Y+ L A G KKL+E +KA+E K + + + ++ K ++ EA+
Sbjct: 339 YYNLGNALRGQ-KKLDEAVAAYQKAIEL--NPKYATAYNNLGIALSDQKKLD----EAVA 391
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
Y++ ++ P+D Y GI + +K DEA ++K L P++
Sbjct: 392 AYQKAIELNPKDATAYYNLGIALSDQKKLDEAVAAYQKAIELDPKD 437
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 39/216 (18%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L PN+ +A L + KL EA+ + ++L PN+ E + V + G+ +
Sbjct: 57 LQVEPNNGKAYNNLGNALRRQGKLPEALTAHQKALQLNPNDAEAYVGIGNVLNAQGKPDE 116
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMA-YDGSDKKLNEVEKRIEKAMERCKK---------- 250
A+ + + + DP +AY+ L A YD +KL E KA+E K
Sbjct: 117 AVAAYRKAIEFDPKYAKAYNSLGNALYD--QEKLKEAVAAYRKAIEFDHKYAAAYYNLGN 174
Query: 251 ---EKKKSDLRDFKLLIAQIKVME-------------------SKHSEALRVYEELVKEE 288
E+K+ D + + A K +E K EA+ Y+E +K
Sbjct: 175 VLYEQKELD----EAVAAYRKAIELNPKYATAYNNLGNALSDQKKLDEAVAAYQEAIKLN 230
Query: 289 PRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
P+D Y GI + +K DEA ++K L P+
Sbjct: 231 PKDATAYNNLGIALSDQKKLDEAVAAYQKAIELDPK 266
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 84/203 (41%), Gaps = 24/203 (11%)
Query: 135 EKEIEQHLAA-------NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL 187
+K++++ +AA NP D A L +KL EAV + IEL+P
Sbjct: 213 QKKLDEAVAAYQEAIKLNPKDATAYNNLGIALSDQKKLDEAVAAYQKAIELDPKYATAYY 272
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMER 247
S + + A+ +++ + DP AY+ L A KKL+E +KA+E
Sbjct: 273 NLGNALSDQKKLDEAVAAYQKAIELDPKYATAYYNLGNAL-SDQKKLDEAVAAYQKAIE- 330
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMES-----KHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
D K A + + K EA+ Y++ ++ P+ Y GI
Sbjct: 331 ----------LDPKYATAYYNLGNALRGQKKLDEAVAAYQKAIELNPKYATAYNNLGIAL 380
Query: 303 TLLRKKDEAEKQFEKFRRLVPRN 325
+ +K DEA ++K L P++
Sbjct: 381 SDQKKLDEAVAAYQKAIELNPKD 403
>gi|351706998|gb|EHB09917.1| Intraflagellar transport protein 88-like protein [Heterocephalus
glaber]
Length = 893
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 678 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 737
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P V+ LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 738 YKDIHRKFPENVDCLRFLVRLC--TDIGLKEVQEYATKLKRLEK-MKEIREQRIKS 790
>gi|399887088|ref|ZP_10772965.1| hypothetical protein CarbS_00910 [Clostridium arbusti SL206]
Length = 321
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLK-AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
KL++++D+ +++ EL + ++ A + G+SE A + +++ L D AY+
Sbjct: 21 NKLIKSLDLYNKVYELSSGKNLDSIINLALIYDSLGKSEKAKEYYKKALSIDNYDERAYY 80
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
GL YD ++K E + KA+ K +A + +K A+ Y
Sbjct: 81 GLATIYD-EEEKYEEAIRLYNKAIYINPNYHKAY------FFLANTYDVSNKKELAIETY 133
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
E+L+ P DF L G IY + D A K F K ++ P N+
Sbjct: 134 EKLLSLNPMDFLANLNLGCIYEEQNQNDFAYKMFSKALKINPNNN 178
>gi|254192260|ref|ZP_04898749.1| TPR domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254259170|ref|ZP_04950224.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
gi|157987455|gb|EDO95231.1| TPR domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254217859|gb|EET07243.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
Length = 614
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|254181068|ref|ZP_04887666.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
gi|184211607|gb|EDU08650.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
Length = 614
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
Length = 545
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 27/229 (11%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
++E E+ + L PN + L+ L ++ S ++ EA+ + ++LI L+P ++ A
Sbjct: 201 FKEAEELYKSVLEKYPNSPKILEKLAKLYTASGRIEEAIKIYEKLINLKPRNVNYKTEYA 260
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLR--VEAYHGLVMAYDGSDKKLNEV-EKRIEKAMER 247
+ GE + A K EE+ +P V + L + G KK E+ E + + E
Sbjct: 261 LLLLSTGEFDKAKKILEELYYVNPSNPNVAFAYALTLEATGELKKAKEIYENLLNRFPEN 320
Query: 248 CKKEKKK-------SDLRDFKLLIAQIKVM-----------------ESKHSEALRVYEE 283
K ++ + D K LI + KV+ ++ +AL + ++
Sbjct: 321 IKVIERLIGIYLDLGNYEDAKRLIEKAKVLAPDKKEILFLEADYYSKTKQYDKALEILKK 380
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYF 332
L K+ P D R Y + I+Y L AEK K L P N Y Y
Sbjct: 381 LEKDYPNDSRVYFMEAIVYDNLGDIKNAEKALRKAIELDPENPDYYNYL 429
>gi|365157973|ref|ZP_09354216.1| hypothetical protein HMPREF1015_00376 [Bacillus smithii 7_3_47FAA]
gi|363622152|gb|EHL73323.1| hypothetical protein HMPREF1015_00376 [Bacillus smithii 7_3_47FAA]
Length = 217
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 158 VRIKSQKLVEAVDVIDRLIELEPNE----FEWQLLKAQVQSYAGESEAAIKGFEEILRKD 213
V+++ KL A+ + R +EL PN+ F++ L A++ Y E AI+ FE++++ +
Sbjct: 113 VQLEQNKL--ALPYLQRAVELNPNDSEALFQYGLSLAKLNVY----EEAIRQFEKVIQLN 166
Query: 214 PLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
P +AY+ L +AY G + + +K +KA+E
Sbjct: 167 PNHADAYYNLGVAYAGYREDREQAKKMFQKALE 199
>gi|338535394|ref|YP_004668728.1| protein methyltransferase FrzF [Myxococcus fulvus HW-1]
gi|337261490|gb|AEI67650.1| protein methyltransferase FrzF [Myxococcus fulvus HW-1]
Length = 597
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 27/233 (11%)
Query: 72 SSPLIKITSVTVAAA--ALLFMRLPF---HSIKPAIAAPVAAAATVESTNE--STKDTTS 124
S+P + + +V + +++ RLP HS PAIA+P A+AA T+E S
Sbjct: 336 SAPSVTLPAVGASTGPRSVVPGRLPAVSPHSPLPAIASPTASAARSRITSELPSVGSPEP 395
Query: 125 AREDVSYEEKEKEIEQHLAANPNDIEALQTL--------MEVRIKSQK-LVEAVDVIDRL 175
AR ++ E + A+ D+ A TL M VR +Q A+ + RL
Sbjct: 396 ARPRITTELPA--VATPPRASSVDVPAWPTLLPPAERLAMAVRKMTQGDFSAAIAGVQRL 453
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA-YHGLVMAYDGSDKKL 234
+ EP++ + L + S G A + F + ++++PL VEA G V A + L
Sbjct: 454 LADEPSDLDGLLTLGNLFSLTGRIPEAREAFAQAIQREPLCVEARVFGGVAALQAGE--L 511
Query: 235 NEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
E + KA+ + L L+AQ+ H A R Y + +
Sbjct: 512 GEARGELAKAL------FLEPTLAIGHYLLAQVHERTQDHEAARRSYRNAIAQ 558
>gi|134277901|ref|ZP_01764616.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
gi|134251551|gb|EBA51630.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
Length = 614
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|53724807|ref|YP_102262.1| hypothetical protein BMA0453 [Burkholderia mallei ATCC 23344]
gi|52428230|gb|AAU48823.1| TPR domain protein [Burkholderia mallei ATCC 23344]
Length = 626
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 30 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 89
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 90 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 148
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 149 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 202
Query: 312 EKQF 315
F
Sbjct: 203 IAHF 206
>gi|254422317|ref|ZP_05036035.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
gi|196189806|gb|EDX84770.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
Length = 987
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 44/175 (25%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A+ DR ++++P+ E +++V E A+ +E+ + P R+EA++
Sbjct: 711 ALSAYDRALDVQPSNAELWFSRSKVLLELDRKEEALAALDEVTKLTPSRIEAWY------ 764
Query: 228 DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
+K LR+ + ++ AL +E+ +++
Sbjct: 765 ------------------------QKGRLLRELR-----------QYQSALEAFEQAIEQ 789
Query: 288 EPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIF 342
+P D R +L +G+ + LRK++EA F R + N Y E +V+ VA I
Sbjct: 790 DPIDARVWLNKGMTLSRLRKREEA---IAAFDRALDINPDYHEAWVNRGVAFGIL 841
>gi|167816884|ref|ZP_02448564.1| TPR domain protein [Burkholderia pseudomallei 91]
Length = 614
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|254195664|ref|ZP_04902091.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|418380278|ref|ZP_12966262.1| TPR domain-containing protein [Burkholderia pseudomallei 354a]
gi|418557446|ref|ZP_13122041.1| TPR domain-containing protein [Burkholderia pseudomallei 354e]
gi|169652410|gb|EDS85103.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|385365088|gb|EIF70785.1| TPR domain-containing protein [Burkholderia pseudomallei 354e]
gi|385377517|gb|EIF82088.1| TPR domain-containing protein [Burkholderia pseudomallei 354a]
Length = 614
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|126442191|ref|YP_001059924.1| hypothetical protein BURPS668_2906 [Burkholderia pseudomallei 668]
gi|126221684|gb|ABN85190.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 668]
Length = 614
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|67642936|ref|ZP_00441687.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
gi|121599439|ref|YP_993899.1| hypothetical protein BMASAVP1_A2599 [Burkholderia mallei SAVP1]
gi|124386425|ref|YP_001026959.1| hypothetical protein BMA10229_A0970 [Burkholderia mallei NCTC
10229]
gi|126451387|ref|YP_001079753.1| hypothetical protein BMA10247_0177 [Burkholderia mallei NCTC 10247]
gi|166999704|ref|ZP_02265538.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
gi|254177047|ref|ZP_04883704.1| TPR domain protein [Burkholderia mallei ATCC 10399]
gi|254208928|ref|ZP_04915276.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
gi|254360018|ref|ZP_04976288.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
gi|121228249|gb|ABM50767.1| TPR domain protein [Burkholderia mallei SAVP1]
gi|124294445|gb|ABN03714.1| TPR domain protein [Burkholderia mallei NCTC 10229]
gi|126244257|gb|ABO07350.1| tetratricopeptide repeat protein [Burkholderia mallei NCTC 10247]
gi|147750804|gb|EDK57873.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
gi|148029258|gb|EDK87163.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
gi|160698088|gb|EDP88058.1| TPR domain protein [Burkholderia mallei ATCC 10399]
gi|238524157|gb|EEP87592.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
gi|243064201|gb|EES46387.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
Length = 614
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|386811837|ref|ZP_10099062.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386404107|dbj|GAB61943.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 311
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 16/247 (6%)
Query: 80 SVTVAAAALLFMRLP---FHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEK 136
+V +ALLF+ L F K A++ E S E++ EK K
Sbjct: 7 NVFFLVSALLFLFLSCGNFGCSKQESGTEQASSGKFEGEAPSVHKKARLDEEI---EKNK 63
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
++ L NPND L + ++ L E++ + +E P+ E + + + +
Sbjct: 64 KL---LEINPNDATGHYNLGLLYEENGMLDESLASYKKALETNPSMIEALIGQGNILNKK 120
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
G+S+ AI F++ + P EAY GL + Y + + V K +A++
Sbjct: 121 GKSDEAISVFKKAVDMSPHHAEAYEGLGLVYVHKGQAEDAV-KAFLRAIDI------NPG 173
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L + + + + +++ +EA+ + + ++ P+ Y G+ YT L K DEA ++
Sbjct: 174 LVNARYNLGILYAKKAQFNEAIAEWTKAIEINPQKIEVYYNLGVGYTKLGKMDEAISVWQ 233
Query: 317 KFRRLVP 323
K + P
Sbjct: 234 KALTIRP 240
>gi|373461188|ref|ZP_09552934.1| hypothetical protein HMPREF9944_01198 [Prevotella maculosa OT 289]
gi|371953518|gb|EHO71342.1| hypothetical protein HMPREF9944_01198 [Prevotella maculosa OT 289]
Length = 655
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
++ + E+ Q + PN + R+ +L +A+D D+ IE++PN F +
Sbjct: 210 NWNKAEQAFSQAIHYTPNVVNNYTYRAMCRVNLNRLGQAMDDFDKAIEMDPNSFLAHYNR 269
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD 228
+ G+ AI+ F +LR +P ++A + + D
Sbjct: 270 GLLGVTVGDDNKAIRDFSFVLRLEPNNLQALYNRALLLD 308
>gi|219684538|ref|ZP_03539481.1| tetratricopeptide repeat domain protein [Borrelia garinii PBr]
gi|219671900|gb|EED28954.1| tetratricopeptide repeat domain protein [Borrelia garinii PBr]
Length = 1014
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN+I A+ L + ++ KL E+++ I++ I L P + E+ LKA + AI
Sbjct: 804 PNEI-AIYNLSIAKFENNKLEESLETINKAINLNPEKSEYLYLKASINLKNENYPNAISL 862
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ ++ K+P AY L AY+ S K
Sbjct: 863 YSSVIEKNPENTSAYINLAKAYEKSGNK 890
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ ++ ++ ++ ++P + E + Q
Sbjct: 570 KDLNEFLTINPNDTYASKTLAQ----ANKIQQSENLKSKVYSIKPTDLENPKTRQQ---- 621
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
AIK E L +P A L AY+ + L +VE EK + ++
Sbjct: 622 ------AIKDLNEFLTINPNDTYASKTLAQAYENNGD-LPKVENVYEKIAKLTNAQEDY- 673
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+KL I + K+ + +HS + +++ ++ P+ + + +GI +L K +A + F
Sbjct: 674 ----YKLGIIRFKLKKYEHS--IGSFDQTIRLNPKHKKAHNNKGIALMMLNKNKKAVESF 727
Query: 316 EK 317
EK
Sbjct: 728 EK 729
>gi|94967940|ref|YP_589988.1| hypothetical protein Acid345_0911 [Candidatus Koribacter versatilis
Ellin345]
gi|94549990|gb|ABF39914.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 515
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 16/194 (8%)
Query: 133 EKEKEIEQHLAA-NPNDIEALQTLMEVRIKSQKLVEAVDVIDR-LIELEPNEFEWQLLKA 190
EK + + LA+ +PND A Q ++ + +L E + + R +E P + QLL
Sbjct: 316 EKAVSVARRLASVSPNDPNA-QYILAFALVENELWETAEPMARKAVEQNPKDANSQLLMG 374
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLVMAYDGS-DKKLNEVEKRIEKAMER 247
+ GE +AA F+E LR DP ++A Y LV G D E++ + K +
Sbjct: 375 IIHLNKGELDAARVSFDETLRLDPNLLDAHYYSALVSDRKGDVDAARTELDALVVKNPDH 434
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+ + LR ++ +++ + A E V+ +P + + G++Y L
Sbjct: 435 ANAQAELGVLR--------LRAGDAQGARA--ALEAAVRLQPEASQTHYQLGLVYARLGL 484
Query: 308 KDEAEKQFEKFRRL 321
+DE++ Q +F++L
Sbjct: 485 QDESKAQMAEFQKL 498
>gi|260823344|ref|XP_002604143.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
gi|229289468|gb|EEN60154.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
Length = 819
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I SQ +A+ +R ++P++ +WQL+ A +G + A++
Sbjct: 618 PSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVIQPSQVKWQLMVASCHRRSGNYQQALET 677
Query: 206 FEEILRKDPLRVEAYHGLV 224
++EI K P VE LV
Sbjct: 678 YKEIHSKFPENVECLRFLV 696
>gi|418540145|ref|ZP_13105707.1| TPR domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418546395|ref|ZP_13111614.1| TPR domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385362541|gb|EIF68351.1| TPR domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385364697|gb|EIF70405.1| TPR domain-containing protein [Burkholderia pseudomallei 1258b]
Length = 614
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|255525264|ref|ZP_05392205.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
gi|296187773|ref|ZP_06856167.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
gi|255511029|gb|EET87328.1| TPR repeat-containing protein [Clostridium carboxidivorans P7]
gi|296047730|gb|EFG87170.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
Length = 306
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLK-AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
KL++A+D+ ++ EL E ++ A + G+SE A ++E L D AY+
Sbjct: 21 NKLIKALDLYNKAYELSNGEDVDTIINLALIYDSLGKSEKAKDYYKEALNIDDYEERAYY 80
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
GL +D ++ E K KA+ K +A + + K A+ Y
Sbjct: 81 GLATIHD-EEENYEEAIKLYNKAIYINPNYHKAY------FFLANVYDVSGKKDLAIETY 133
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
E+L+ P DF L G IY + A K+F K ++ NH
Sbjct: 134 EKLLNLNPMDFWANLNLGCIYEERNENGAAYKKFSKALKIDSNNH 178
>gi|409993375|ref|ZP_11276518.1| hypothetical protein APPUASWS_19737 [Arthrospira platensis str.
Paraca]
gi|291568213|dbj|BAI90485.1| TPR domain protein [Arthrospira platensis NIES-39]
gi|409935756|gb|EKN77277.1| hypothetical protein APPUASWS_19737 [Arthrospira platensis str.
Paraca]
Length = 1104
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 24/209 (11%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN--EFEWQLLKAQVQSYAG 197
Q L NPN E L + +++ ++ EA+ + IE++P+ W L +V G
Sbjct: 358 QALEINPNFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKPDLAAVHWNL--GRVYQQLG 415
Query: 198 ESEAAIKGFEEILRKDPLRVEAYH----GLVMAYDGSDKKLNEVEKRI---EKAMERCKK 250
+EAAI ++ L P VEA G ++A G E E+ I ++A+ R
Sbjct: 416 NTEAAINSWKIALELKPDLVEAEFNFEFGNILARRG------EYEQAIASYQRAISR--- 466
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
K + + I ++V + + EAL ++ + P+ YL I+T +R+ +
Sbjct: 467 ---KPNWAEPYANIGCLRVQQDRLEEALEQLQKAISLNPKMPEMYLHTARIFTKMRRHQD 523
Query: 311 AEKQFEKFRRLVPRNHPYREYFVDNMVAT 339
A ++K L P N P + NM AT
Sbjct: 524 AINHYQKVIELKP-NFPDAYANLANMQAT 551
>gi|254295602|ref|ZP_04963060.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|157805565|gb|EDO82735.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
Length = 614
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 71/184 (38%), Gaps = 7/184 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E LAANP D +AL +R + + EA D++ R + L PN+ QL
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
G + AI+ F L P A++ L AY ++ + V+ ++A+ +
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLGNAYAAQERHDDAVDA-FKRALALTPGD 136
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + +H +AL + ++ P + G+ L D A
Sbjct: 137 ASIHN------NLGNALNALGRHDDALEAFRRALELRPGHAGAHNNLGMALAALGDTDAA 190
Query: 312 EKQF 315
F
Sbjct: 191 IAHF 194
>gi|424897046|ref|ZP_18320620.1| tetratricopeptide repeat protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393181273|gb|EJC81312.1| tetratricopeptide repeat protein [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 289
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 90/240 (37%), Gaps = 17/240 (7%)
Query: 110 ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAV 169
A E+TN +T S + EE + + ANP D E + + +A+
Sbjct: 32 AGCETTN-TTDAVISIDKAQGSEENIASLTAVINANPKDPEGYNVRGSAYGRGGQFRQAL 90
Query: 170 DVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY-- 227
+ + +++ P F+ +A V G+ AI + L+ +P AY G Y
Sbjct: 91 NDFNTALQINPRFFQAYANRALVYRNMGQQAQAISDYNAALQINPSYDVAYIGRGNVYRM 150
Query: 228 -DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
D+ N+ +K I+ + + LI Q + + K A+ + + +
Sbjct: 151 AGQDDQAFNDFDKAIQLGTTDGRAYHNRG-------LIYQKRNQQDK---AIDDFSKAIS 200
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
P PY +GI Y L D A F F + N E + + + + G+K
Sbjct: 201 LAPNSPEPYNGRGISYIALNDNDNA---FADFNHAIELNGNIAESWANQALVYERRGDKA 257
>gi|15126637|gb|AAH12250.1| Intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 824
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 617 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 676
Query: 206 FEEILRKDPLRVEAYHGLV 224
++EI RK P VE LV
Sbjct: 677 YKEIHRKFPENVECLRFLV 695
>gi|383320702|ref|YP_005381543.1| Tfp pilus assembly protein PilF [Methanocella conradii HZ254]
gi|379322072|gb|AFD01025.1| Putative Tfp pilus assembly protein PilF [Methanocella conradii
HZ254]
Length = 416
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY------DGSDKKLNE------- 236
AQ G + AI FEEIL+KD AY GL +AY + S KK NE
Sbjct: 28 AQSHMIEGSIDEAIADFEEILKKDIKYEPAYLGLGLAYLAKGDLNASLKKFNEALAIDPH 87
Query: 237 -VEKRIEKAMERCKKEKKKSDLRDFK-------------LLIAQIKVMESKHSEALRVYE 282
+E R+ A+ +K R+FK L + I E ++ A Y
Sbjct: 88 SIESRLSLALTYLYMQKYADAKREFKEVLKIEPDNFYSRLYLGDIYASEDEYENAKSEYR 147
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
E ++ EP + + G + L + ++A K+ + RL P
Sbjct: 148 EALRIEPDSWEAHFKMGSTHVLSMEFEDAAKELREAIRLKP 188
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 125 AREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE 184
A ED YE + E + L P+ EA + + S + +A + I L+P+E
Sbjct: 134 ASED-EYENAKSEYREALRIEPDSWEAHFKMGSTHVLSMEFEDAAKELREAIRLKPDEAL 192
Query: 185 WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDG-SDKKLNEVEKRI 241
S GE + AIK EE +R DP E +H G+++ G +++ L E+E+ I
Sbjct: 193 VHSTMGNTLSLIGELDEAIKECEEAVRLDPCDAEYHHSLGIILMEKGETNRALAELEEAI 252
Query: 242 EKAMERCKKEKKKSDLRDFK--LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
K D RD + A I + ++ EA+ + +E VK P +
Sbjct: 253 ------------KLDPRDIDAYFISASIHFEKEENGEAIGLLQEAVKISPDSPDAHHNLA 300
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVPRN 325
I Y + +A K+F + L P +
Sbjct: 301 IGYLQVGSIGDAIKEFIEALNLNPDD 326
>gi|333994294|ref|YP_004526907.1| hypothetical protein TREAZ_0967 [Treponema azotonutricium ZAS-9]
gi|333734272|gb|AEF80221.1| tetratricopeptide repeat protein [Treponema azotonutricium ZAS-9]
Length = 332
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 3/130 (2%)
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
AIK + + KDP VEA++ L +Y ++ E R K++ R E K +F+
Sbjct: 47 AIKAGKAAVEKDPKDVEAHYNLGRSYLADNR--GEQALREFKSVSRLGIEGKNIPETEFR 104
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
IA++ + ++ EAL+ Y L+K++P + Y G+++ + D AE+ +K +
Sbjct: 105 QTIAKLYIQYNEKEEALKEYVLLIKKQPENPEYYYQAGMLFNERNRADLAEQYLKKAISI 164
Query: 322 VPRN-HPYRE 330
P++ PY E
Sbjct: 165 NPKDARPYLE 174
>gi|158521593|ref|YP_001529463.1| hypothetical protein Dole_1582 [Desulfococcus oleovorans Hxd3]
gi|158510419|gb|ABW67386.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 767
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y + E+ Q + P+ + A L E R+K + EA D RL+E++P +L A
Sbjct: 45 YRQAEQAYRQAIDTEPSLVSAWMGLAETRLKLGDVKEATDAYARLLEIDPGHVPARLNMA 104
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEA 219
+ + EAA +G +++L +P ++A
Sbjct: 105 RFDLLSNRLEAAEQGVQQVLSVEPANIDA 133
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 25/141 (17%)
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--------- 250
E I+GFE LRK+PL+ + +V L V+ +KA++RC +
Sbjct: 486 EQTIEGFEAALRKNPLQAGLFENIVF--------LKGVKGEYDKAIDRCNQRVASLEQMA 537
Query: 251 ----EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
E+++S + L + + + +A +++ V +P + Y ++ L +
Sbjct: 538 DIAPEQRQSLMAAVYALKGDLYLAKGDREKAKTAFQQAVSMDPDTLKSYFALARLHILEK 597
Query: 307 KKDEAEKQFEKFRRLVPRNHP 327
D A Q+ R + HP
Sbjct: 598 DLDGAISQY----RTILNRHP 614
>gi|224536187|ref|ZP_03676726.1| hypothetical protein BACCELL_01053 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522200|gb|EEF91305.1| hypothetical protein BACCELL_01053 [Bacteroides cellulosilyticus
DSM 14838]
Length = 919
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 52/94 (55%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+Y E+E+ +E+ +A P ++ L L+ V I + + + + IDR++E++PN + +K
Sbjct: 184 NYSEQERVLEEAIAKYPVSLDFLYNLVNVHIATNNMPKLLSAIDRILEVDPNNDKVLPIK 243
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
A++ G+++ A+ ++ + P E GL
Sbjct: 244 ARILERQGKNQEALDIYKRLYALHPDSFELLTGL 277
>gi|431808131|ref|YP_007235029.1| hypothetical protein BPP43_07840 [Brachyspira pilosicoli P43/6/78]
gi|430781490|gb|AGA66774.1| TPR domain-containing protein [Brachyspira pilosicoli P43/6/78]
Length = 595
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLV 224
EA+ D+ IEL PN E + +SY G + AIK F++ + +P EAY+ G +
Sbjct: 368 EAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELNPNNSEAYNNRGNI 427
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
+Y + E K KA+E + + I K + EA+++Y+++
Sbjct: 428 KSY---LELYEEAIKDYNKAIELNPNNSEAYN------NIGTAKSNLGYNEEAIKIYDKV 478
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMV 337
++ P Y +G+ L K EA K ++K L P N YF NMV
Sbjct: 479 IELNPNYSNAYNNRGVSKHKLEKYKEAIKDYDKAIELNPSNSD--AYF--NMV 527
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 124 SAREDVSY-EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE 182
+A+ D+ Y EE K+ ++ + NPN E + EA+ D+ IEL PN
Sbjct: 358 NAKSDLDYNEEAIKDYDKAIELNPNSSETYNNRGNAKSYLGLYKEAIKDFDKAIELNPNN 417
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI- 241
E + ++SY E AIK + + + +P EAY+ + A S+ NE +I
Sbjct: 418 SEAYNNRGNIKSYLELYEEAIKDYNKAIELNPNNSEAYNNIGTA--KSNLGYNEEAIKIY 475
Query: 242 EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGII 301
+K +E + R +++ K+ K+ EA++ Y++ ++ P + Y +
Sbjct: 476 DKVIELNPNYSNAYNNRG----VSKHKL--EKYKEAIKDYDKAIELNPSNSDAYFNMVLP 529
Query: 302 YTLLRKKDEAEKQ 314
LL E EK+
Sbjct: 530 KQLLANTTEDEKE 542
>gi|423226421|ref|ZP_17212887.1| hypothetical protein HMPREF1062_05073 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629849|gb|EIY23855.1| hypothetical protein HMPREF1062_05073 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 919
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 52/94 (55%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+Y E+E+ +E+ +A P ++ L L+ V I + + + + IDR++E++PN + +K
Sbjct: 184 NYSEQERVLEEAIAKYPVSLDFLYNLVNVHIATNNMPKLLSAIDRILEVDPNNDKVLPIK 243
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
A++ G+++ A+ ++ + P E GL
Sbjct: 244 ARILERQGKNQEALDIYKRLYALHPDSFELLTGL 277
>gi|334117397|ref|ZP_08491488.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333460506|gb|EGK89114.1| Tetratricopeptide TPR_2 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 2028
Score = 43.5 bits (101), Expect = 0.15, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 11/141 (7%)
Query: 92 RLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKE-KEIEQHLAANPNDIE 150
RLP AIA A A + E+ + SA + E+ E E+ L+ NPN E
Sbjct: 1254 RLP-----EAIAHYRQALAIDGNLAETASNLGSALAEAGETEQAIAEYERALSLNPNCAE 1308
Query: 151 ALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL-----LKAQVQSYAGESEAAIKG 205
AL L +R + + EA+ ++ I++ PN L L+AQ + E AI
Sbjct: 1309 ALINLGLLREEQGDVAEAISCYEQAIQVNPNCAVAYLNLGIALEAQGEEAGANYEQAIAN 1368
Query: 206 FEEILRKDPLRVEAYHGLVMA 226
+E + +P VEA H L A
Sbjct: 1369 YERAIAIEPNYVEALHNLAYA 1389
>gi|418737283|ref|ZP_13293681.1| tetratricopeptide repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410747442|gb|EKR00348.1| tetratricopeptide repeat protein [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 248
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E L E+P D+RP + +G IY L ++AE +
Sbjct: 112 KDIRLLFGTALLYNGKARDALNITERLKAEDPNDYRPLVLEGQIYYYLGSIEKAEVSLKW 171
Query: 318 FRRLVP 323
LVP
Sbjct: 172 ANSLVP 177
>gi|27376419|ref|NP_767948.1| hypothetical protein blr1308 [Bradyrhizobium japonicum USDA 110]
gi|27349559|dbj|BAC46573.1| blr1308 [Bradyrhizobium japonicum USDA 110]
Length = 458
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
++ + + +P D E+ + V ++L A+ D+ I+L+P + + +
Sbjct: 126 DLSKAIELDPQDAESYELRGVVYTSQRRLDRALADYDQAIKLKPGDAQAWSDRGVTYYLG 185
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
G++E AI+ E LR DP R Y AY KKL +++K + A E + + K +
Sbjct: 186 GDNEKAIRDLSEALRLDPNRPRTYTNRGAAY----KKLGQLDKSVADAAEAIRLDPKVPE 241
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR 290
D + L + M + +A+ Y++ ++ P+
Sbjct: 242 YYDNRGL--SLAAM-GDYDKAIADYDQALRLAPK 272
>gi|445062005|ref|ZP_21374457.1| TPR domain-containing protein, partial [Brachyspira hampsonii
30599]
gi|444506613|gb|ELV06923.1| TPR domain-containing protein, partial [Brachyspira hampsonii
30599]
Length = 209
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP + + L E+ + ++ +A+++ ++ IE PN+F + + A + Y E AI+
Sbjct: 21 NPENNQYYYYLSELYKEIKEYNKAIELYNKAIETNPNDFSYYISIAALYEYIKEYNKAIE 80
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR---IEKAMERCKKEKKKSDLRDFK 261
++ + D +EAY L Y+ KL +E+R KA+E KE D
Sbjct: 81 MLKKSIENDSDNIEAYIALGDLYE----KLGNIEERNAAYRKAIEIYNKENDAYSFEDIG 136
Query: 262 LLIAQIKVMESKHS---EALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
L ++ +E +++ +A+ +Y E +D Q +Y L K+ A ++K
Sbjct: 137 NLYEKLGDIEKRNAAYKKAIEIY-----NETQDIYHLEKQADLYIKLNDKNNAINSYKKL 191
Query: 319 RRLVPRNH 326
+ P N+
Sbjct: 192 LEIDPYNN 199
>gi|300870878|ref|YP_003785749.1| hypothetical protein BP951000_1259 [Brachyspira pilosicoli 95/1000]
gi|300688577|gb|ADK31248.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 233
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH-- 221
K EA+ ++ IEL+ N + V++ GE E AIK ++ + D AY+
Sbjct: 28 KYEEAIVYYNKSIELDNNYSVAYYNRGSVKADLGEYEEAIKDYDMAIELDHNYTYAYNNR 87
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
GL Y G + E K +KA+E SD D +K + K+ EA++ +
Sbjct: 88 GLAKDYLG---EYEEAIKDYDKAIEL------DSDYSDAYNNRGIVKNILGKYEEAVKDF 138
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPY 328
++++ P D Y +G + +L + +EA K ++K L P N +
Sbjct: 139 NKVIELNPNDSDAYYNRGTVKDVLGQYEEAIKDYDKAIELNPNNGAF 185
>gi|116327127|ref|YP_796847.1| hypothetical protein LBL_0303 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116332216|ref|YP_801934.1| hypothetical protein LBJ_2768 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116119871|gb|ABJ77914.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116125905|gb|ABJ77176.1| Conserved hypothetical protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 263
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E L E+P D+RP + +G IY L ++AE +
Sbjct: 127 KDIRLLFGTALLYNGKARDALNITERLKAEDPNDYRPLVLEGQIYYYLGSIEKAEVSLKW 186
Query: 318 FRRLVP 323
LVP
Sbjct: 187 ANSLVP 192
>gi|19705092|ref|NP_602587.1| hypothetical protein [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19713016|gb|AAL93886.1| Tetratricopeptide repeat family protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 628
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 26/222 (11%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y++ ++ ++ + NPND K EA++ D+ I+L+PN + K
Sbjct: 77 YDKAIEDYDKAIKLNPNDACYFNNRGHSYFALNKYSEAIEDYDKAIKLDPNNASY-YYKR 135
Query: 191 QVQSYA-GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
YA + + AI+ + + ++ DP AY S + EK K++E
Sbjct: 136 GFSYYALNKYDKAIEDYNKAIKLDPNNA--------AYFSSRGDIYYYEKAYNKSIEDYN 187
Query: 250 KEKKKSDLRDF-----KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLC--QGIIY 302
K K F L ++K K+ EA+ Y + +K P + + C +G Y
Sbjct: 188 KAIKLDPNNAFYYDNRGLAYEKLK----KYKEAINDYNKAIKLNPNN--AFYCYNRGFTY 241
Query: 303 TLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGE 344
L+K EA ++K +L P N YF + VA GE
Sbjct: 242 NKLKKYKEAINDYDKAIKLDPNNAS---YFNNRGVAYNNLGE 280
>gi|418718215|ref|ZP_13277752.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|421095317|ref|ZP_15556030.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410362027|gb|EKP13067.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200801926]
gi|410745208|gb|EKQ93940.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str. UI
09149]
gi|456887274|gb|EMF98336.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200701203]
Length = 263
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E L E+P D+RP + +G IY L ++AE +
Sbjct: 127 KDIRLLFGTALLYNGKARDALNITERLKAEDPNDYRPLVLEGQIYYYLGSIEKAEVSLKW 186
Query: 318 FRRLVP 323
LVP
Sbjct: 187 ANSLVP 192
>gi|51598471|ref|YP_072659.1| surface-located membrane protein 1 [Borrelia garinii PBi]
gi|51573042|gb|AAU07067.1| surface-located membrane protein 1 [Borrelia garinii PBi]
Length = 906
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN+I A+ L + ++ KL E++++I++ + L P + E+ LKA + + A
Sbjct: 693 AKKPNEI-AIYNLSIAKFENNKLEESLEIINKALNLNPEKSEYLYLKASINLKNENYQNA 751
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYD 228
I + ++ K+P AY L AY+
Sbjct: 752 ISLYSSVIEKNPENTSAYINLAKAYE 777
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%), Gaps = 24/183 (13%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + L NPND A +TL + + K+ ++ ++ ++ ++P + E + Q
Sbjct: 462 KDLNEFLKINPNDTYASKTLAQ----ANKIQQSENLKSKIYSIKPTDLENPKNRQQ---- 513
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK-EKKK 254
AIK E L+ +P AY L Y+ + L + E E+ K +
Sbjct: 514 ------AIKDLNEFLKINPNDTYAYKTLAQTYENNGDLL-----KAENVYEKIAKLTNAQ 562
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
D +KL I + K+ + +HS + +++ ++ +P+ + + +GI +L K +A +
Sbjct: 563 EDY--YKLGIIRFKLKKYEHS--IGSFDQTIRLDPKHKKAHNNKGIALMMLNKNKKAVES 618
Query: 315 FEK 317
FEK
Sbjct: 619 FEK 621
>gi|443694227|gb|ELT95420.1| hypothetical protein CAPTEDRAFT_226263 [Capitella teleta]
Length = 837
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 9/120 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP+ I ++ L I SQ +A+ +R ++PN+ +W+L+ A +G + A++
Sbjct: 611 NPSTISVIEWLGAYYIDSQFCEKAIQYFERASIIQPNQVKWKLMIASCHRRSGNYQNALE 670
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKSDLR 258
++ I +K P VE LV +D L EV+ K+ EKA ++ ++E+ S R
Sbjct: 671 TYKSIHKKFPDNVECLRFLVRL--CTDLGLKEVQDYSTLLKKAEKA-QKMREERVTSGTR 727
>gi|434399223|ref|YP_007133227.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428270320|gb|AFZ36261.1| Tetratricopeptide TPR_1 repeat-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 280
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 24/227 (10%)
Query: 123 TSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE 182
+ +E ++EE + +Q + PN + L L E+ Q EAV R+I L P+
Sbjct: 19 NALKEQGNFEESIQSYQQAIKIKPNYTQPLPKLAEIYESQQNWSEAVKCYQRMIGLNPSN 78
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILRKDP-LRVEAYHGLVMAYDGSDKKLNEVEKRI 241
+ L A+V + AI ++E + P L Y L D L E ++ I
Sbjct: 79 YAPYLKLAKVLQKQNKIHGAIAAYQEAIELKPELPARIYKQL------GDLLLQEKDE-I 131
Query: 242 EKAMERCKKEKKKSDLRD--FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
E A+ +K K + + F L A I + + +A+ Y+++++ +P +PYL G
Sbjct: 132 ESAINYYQKALKINSEWNSGFYLKYANILLKKEHFDDAIAYYQKVIELKPDSAKPYLFLG 191
Query: 300 IIYTLLRKK--DEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGE 344
LL K DEA ++K +L P D +VA K G+
Sbjct: 192 D--ALLEKGQLDEAMANYQKAIQLQP----------DFVVAYKKLGD 226
>gi|388256043|ref|ZP_10133224.1| Peptidase family M48 family [Cellvibrio sp. BR]
gi|387939743|gb|EIK46293.1| Peptidase family M48 family [Cellvibrio sp. BR]
Length = 423
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 230 SDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
+KK + + +E+A+ + +E F + Q+ + + K +EA+ + ++ P
Sbjct: 289 GEKKYIDAQNYVEQAIAQQPRENL------FWEMKGQLLMQQKKDNEAVVALDRAIQANP 342
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ F+PY+ +GI Y L K D AEK +R +P
Sbjct: 343 QYFKPYVFRGIAYKQLGKNDMAEKDLTTSQRYLP 376
>gi|428202325|ref|YP_007080914.1| hypothetical protein Ple7327_2023 [Pleurocapsa sp. PCC 7327]
gi|427979757|gb|AFY77357.1| tetratricopeptide repeat protein [Pleurocapsa sp. PCC 7327]
Length = 331
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 11/158 (6%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A+ D+++E PN++ + + +AG E+AI ++ L K P +++ A+
Sbjct: 148 AISCFDKVLEAYPNDYWAHYRQGEAYRFAGNYESAIACYDRALEKRPNDYWSWYRRGDAF 207
Query: 228 DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVME--SKHSEALRVYEELV 285
S KL E +KA+E S +D+ Q +++ ++ EA+ Y+ +
Sbjct: 208 R-SRGKLEESLTNYQKAVE--------SKPQDYWAWYQQGVILQQLQRYGEAISCYQHAL 258
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
K EP D + Q L K +E+ EK L P
Sbjct: 259 KVEPEDDYTHYNQACCQAALGKVNESLDSLEKAIDLYP 296
>gi|389579481|ref|ZP_10169508.1| Tfp pilus assembly protein PilF [Desulfobacter postgatei 2ac9]
gi|389401116|gb|EIM63338.1| Tfp pilus assembly protein PilF [Desulfobacter postgatei 2ac9]
Length = 758
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 100/245 (40%), Gaps = 34/245 (13%)
Query: 115 TNESTKDTTSAREDVSYEEK------EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEA 168
+E K T RE +Y EK E +++ L P+ +A L + +K +K+ EA
Sbjct: 19 ASEQEKADTFIREGNAYFEKQEYAKAEIQLKNALKLTPDSAQAYHLLAQAYLKQKKVQEA 78
Query: 169 VDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH------- 221
RL +LEP+ E +L A + A + A K E++L DP + +
Sbjct: 79 FGTFLRLEQLEPDNLETKLQLASIYFLANKRPEAEKKVEQVLAADPDNITGLYLKAGILG 138
Query: 222 ----GL---------VMAYDGSDKKLNEVEKRIEKAM-ERCKKE---KKKSDLRDFKLLI 264
GL ++A D K + RI +A E + E K+ L I
Sbjct: 139 SKKAGLETLEPIYDRILALDPKQTKAMLLLARIYEAQGESARAEAILKRAVQATPDDLNI 198
Query: 265 AQIKVM----ESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+Q M + +A V E+LV+++P +P + + ++ D AE F K
Sbjct: 199 SQALFMYYLAHKSYDKAQIVLEDLVRQKPEAVQPRIMLATFHADRQENDLAEASFLKAVE 258
Query: 321 LVPRN 325
L P N
Sbjct: 259 LAPDN 263
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+Y++ E+ +++ LA P+ +A ++ I ++ +A + L++ EP+ + L
Sbjct: 313 AYKKAEEMVDEVLAVRPDFPQAKVLKGKLLIIRKQPHQAGQIFLSLLKDEPDSVLYNFLM 372
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA---YDGSDKKLNEVEKRIEKAME 246
V G+ + AI + L+K+P ++A ++MA + +D L E E I +A++
Sbjct: 373 GSVLLEQGKPDQAISYLAKTLKKNPRHLKA--RIIMADIYFKQADYFLAETE--INEALK 428
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
K LL I + +A VYEEL++ P++ G +Y + +
Sbjct: 429 LSPKNYNAL------LLKGNIYAARKEMKKARAVYEELIQTHPQNPAALFSLGNLYVMDK 482
Query: 307 KKDEAEKQFEKFRRLVPR 324
+ D+A +EK + P
Sbjct: 483 QPDKALDAYEKALAINPN 500
>gi|414164025|ref|ZP_11420272.1| hypothetical protein HMPREF9697_02173 [Afipia felis ATCC 53690]
gi|410881805|gb|EKS29645.1| hypothetical protein HMPREF9697_02173 [Afipia felis ATCC 53690]
Length = 654
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P +EA + + + +A+ + ++I+ P E QL A + G+ A++
Sbjct: 16 PEKLEARSQYAQALDLTGQHAKAIVQLRQIIKRSPREMGPQLNLALLLKQIGDLTEAVQL 75
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA 265
F+ IL K P + E ++ L Y D+ L + +KA K K + LR+ I
Sbjct: 76 FKGILSKSPHQFECHYNLAEIYARQDENLLAFD-HFDKAA---KLRPKDAGLRNG---IG 128
Query: 266 QIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+ + +EA+ Y+E ++ +P P QG+ + + K EA K F++ R P+
Sbjct: 129 NLLRALKRPAEAIAQYDEAIRLDPASHIPCYNQGLAFRSIGKFGEARKSFDEAWRKNPK 187
>gi|359689519|ref|ZP_09259520.1| hypothetical protein LlicsVM_14077 [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418749647|ref|ZP_13305935.1| tetratricopeptide repeat protein [Leptospira licerasiae str.
MMD4847]
gi|418759111|ref|ZP_13315291.1| tetratricopeptide repeat protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384113602|gb|EID99866.1| tetratricopeptide repeat protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404274532|gb|EJZ41850.1| tetratricopeptide repeat protein [Leptospira licerasiae str.
MMD4847]
Length = 372
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 44/231 (19%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+++E E Q L NP D + L + Q+ +A+ ++L+ ++P+
Sbjct: 139 NFKESEVYYMQALQINPKDQYVIVGLGHLFFACQRYKDAISWWEKLLVIQPDNI------ 192
Query: 190 AQVQSYAGESEAAIKGFEEILRK-------DPLRVEAYHGLVMAYDGSD--KKLNEVEKR 240
++ + G S IK F+E +R DP A +GL +Y G +K NE +R
Sbjct: 193 -KILTEIGNSYRKIKDFDEAIRYYRRAADLDPRNFFALYGLAESYRGKKDFRKANEFWER 251
Query: 241 I------------------------EKAMERCKKEKKKSDLRDFKLLIAQIKV--MESKH 274
I +KA+E C + S+ D+ L+ + M+
Sbjct: 252 ILEFDPDNKLIINRYADSLRGMGEFDKALE-CFN-RILSEGEDYFALLGKASSLKMKGAR 309
Query: 275 SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+A +Y +L K+ P D RP + +Y+ L K+DEA K F + P N
Sbjct: 310 DKAEEIYVDLHKKFPMDPRPVVELSELYSDLGKRDEALKLLNDFHKKQPLN 360
>gi|344284581|ref|XP_003414044.1| PREDICTED: intraflagellar transport protein 88 homolog [Loxodonta
africana]
Length = 825
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIGVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
+++I RK P VE LV +D L EV+ KR+EK M+ K+++ KS
Sbjct: 678 YKDIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEIKEQRIKS 730
>gi|365883408|ref|ZP_09422556.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
375]
gi|365288132|emb|CCD95087.1| conserved exported hypothetical protein [Bradyrhizobium sp. ORS
375]
Length = 460
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
++ ++ +P+D EA + V ++L A+ D+ I L+P+ + +
Sbjct: 127 DLSMAISLDPDDAEAYELRGVVYTGQRRLDRALADYDQAIRLKPDYAQAYADRGVAFYLR 186
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
G++E A++ + E +R DP R + AY KKL +++K + E +++ K +
Sbjct: 187 GDNEKAVQDYNEAIRLDPDRPRTFTNRAAAY----KKLGQMDKALADDHEAIRRDPKVPE 242
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR 290
D + L Q + +A+ Y++ +K +P+
Sbjct: 243 YFDNRGLTYQ---SLGDYDKAIADYDQAIKLQPK 273
>gi|353231945|emb|CCD79300.1| putative tetratricopeptide repeat protein 10, tpr10 [Schistosoma
mansoni]
Length = 682
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P + + ++ L I+SQ +A+ +R ++PN+ +WQL+ A +G + A++
Sbjct: 456 PCNFDVIEWLGAYYIESQFCEKAIAYFERASLMQPNQIKWQLMIASCHRRSGNYQQALET 515
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
+ I R+ P +E LV SD L E + I K ++R +K K+ + R
Sbjct: 516 YRIIHRRFPENIECLQFLVRL--SSDMDLPEAQDYITK-LKRAEKLKQAREQR 565
>gi|254411497|ref|ZP_05025274.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196181998|gb|EDX76985.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 703
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 23/201 (11%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN------EFE 184
YE +Q P D+E + V++K Q+ A+ D+ +E++PN
Sbjct: 416 YEAAISAFDQVTKLQPEDVETWERRGMVQMKLQRYSAAIASYDKALEIQPNYSSAWYRRG 475
Query: 185 WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKA 244
W L Q + E AIK +++ + P E ++ A+ +K + V+ +KA
Sbjct: 476 WALHNLQ------QYEEAIKSYDKAVEHKPDSAEYWYQRGNAFVNLNKHRDAVDS-YQKA 528
Query: 245 MERCKKEKKKSDLRDFKLLIAQIKVMES--KHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
++ + D ++ +Q ++ + ++ EAL +E+ VK +P + + +
Sbjct: 529 VQF------QPDF--YRAWYSQGSILNNLNQYQEALAAFEQAVKLQPNSYEAWYGRAWAL 580
Query: 303 TLLRKKDEAEKQFEKFRRLVP 323
L++ DEA +EK +L P
Sbjct: 581 HQLQRYDEALMAYEKAVKLRP 601
>gi|209550939|ref|YP_002282856.1| hypothetical protein Rleg2_3363 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536695|gb|ACI56630.1| Tetratricopeptide TPR_2 repeat protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 289
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 90/240 (37%), Gaps = 17/240 (7%)
Query: 110 ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAV 169
A E+TN +T S + EE + + ANP D E + + +A+
Sbjct: 32 AGCETTN-TTDAVISIDKAQGSEENIASLTAVINANPKDPEGYNVRGSAYGRGGQFRQAL 90
Query: 170 DVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY-- 227
+ + +++ P F+ +A V G+ AI + L+ +P AY G Y
Sbjct: 91 NDFNTALQINPRFFQAYANRALVYRNMGQQAQAISDYNAALQINPSYDVAYIGRGNVYRM 150
Query: 228 -DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
D+ N+ +K I+ + + LI Q + + K A+ + + +
Sbjct: 151 AGQDDQAFNDFDKAIQLGTTDGRAYHNRG-------LIYQKRNQQDK---AIDDFSKAIS 200
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
P PY +GI Y L D A F F + N E + + + + G+K
Sbjct: 201 LAPNSPEPYNGRGISYIALNDNDNA---FADFNHAIELNGNIAESWANQALVYERRGDKA 257
>gi|394987155|gb|AFN42835.1| intraflagellar transport protein 88-like protein [Marsilea vestita]
Length = 486
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Query: 144 ANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAI 203
+P +I+ + TL ++ + +A+ + D ++PNE +WQLL A G AAI
Sbjct: 311 VHPVNIDIITTLGGFYVEHELHEKAIPIFDLASRIQPNEVKWQLLVAYCYRRIGSYSAAI 370
Query: 204 KGFEEILRKDPLRVEAYHGLVMAYDGSDKK--LNEVEKRIEK 243
+EIL P +E LV KK + E E R+ K
Sbjct: 371 AKHKEILVHHPNNLECLRYLVNMCTSLGKKDGIEEYEARLHK 412
>gi|307154716|ref|YP_003890100.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
gi|306984944|gb|ADN16825.1| serine/threonine protein kinase [Cyanothece sp. PCC 7822]
Length = 708
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 65 LRTLTPLSSPLIKITSVTVAAAALLFMRLPFHS--IKPAIAAPV---AAAATVE-----S 114
L+ + L +K T AA+L S IK +A + AA V S
Sbjct: 269 LQAIKTLRHSYVKEQKTTATQAAILHQSRQAQSRIIKVLMALAIIGLAAGGVVSIDYWLS 328
Query: 115 TNESTK---DTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
N +TK + + YE+ + + L NPN+ A Q + ++ +A+D
Sbjct: 329 LNNATKMYNKGNTLYQLQRYEDALQAYDTSLNINPNNANAWQGKGDTLQALKRYQQALDS 388
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD 231
D I+++P+ ++ + + +V G + AI +E+++ EA+ L G
Sbjct: 389 YDEAIQIQPDSWQAWMGRGKVLEKLGRNLEAINSYEKVIIFKDNSWEAWSNL-----GEL 443
Query: 232 K----KLNEVEKRIEKAM------ERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
K + +E K +EK++ E +K S L++ K K+ +A++ Y
Sbjct: 444 KVKLAQYSEAIKDLEKSLKLNPDNEEAWYQKGWS-LQNLK-----------KYEDAIKSY 491
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+E VK + + +G IY L K +EA + + K + P
Sbjct: 492 DETVKVNSSFSQAWYQKGNIYMNLEKYNEASENYAKAVQFQP 533
>gi|328874364|gb|EGG22729.1| hypothetical protein DFA_04859 [Dictyostelium fasciculatum]
Length = 541
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 25/241 (10%)
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
S D ++ +D Y +K +EQ +A + + + AL +L ++ +K+ L A+ +R++E
Sbjct: 174 SLADCYASLDD--YATAKKLLEQAVALDKDYLPALGSLGDLHVKTGTLDRALKYYERVVE 231
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV 237
L+P+ L V G +++A+K ++ ++R + E+ LN
Sbjct: 232 LQPHNLNGLLGLGHVALKQGSTDSAVKLYQRVVRLGASQAES--------------LNYA 277
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY-L 296
++ + R KK + + + + +A I + AL +K P + +
Sbjct: 278 TG-VDTNLMRLKKSAEYNPIYSASICLANIHERHGRFDNALEAINTAIKIHPGSVYAHSI 336
Query: 297 CQGIIYTLLRKKD--EAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVD--RESMA 352
C I LR K+ +A + R+ P N + D ++ F E + RE +A
Sbjct: 337 CASI---HLRNKEPLKAIDTIDSALRVDPNNEFAKTIRADALMDMNRFKESIGLYREVIA 393
Query: 353 S 353
+
Sbjct: 394 N 394
>gi|424913568|ref|ZP_18336932.1| tetratricopeptide repeat protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|424918040|ref|ZP_18341404.1| tetratricopeptide repeat protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392849744|gb|EJB02265.1| tetratricopeptide repeat protein [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392854216|gb|EJB06737.1| tetratricopeptide repeat protein [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 289
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 90/240 (37%), Gaps = 17/240 (7%)
Query: 110 ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAV 169
A E+TN +T S + EE + + ANP D E + + +A+
Sbjct: 32 AGCETTN-TTDAVISIDKAQGSEENIASLTAVINANPKDPEGYNVRGSAYGRGGQFRQAL 90
Query: 170 DVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY-- 227
+ + +++ P F+ +A V G+ AI + L+ +P AY G Y
Sbjct: 91 NDFNTALQINPRFFQAYANRALVYRNMGQQAQAISDYNAALQINPSYDVAYIGRGNVYRM 150
Query: 228 -DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
D+ N+ +K I+ + + LI Q + + K A+ + + +
Sbjct: 151 AGQDDQAFNDFDKAIQLGTTDGRAYHNRG-------LIYQKRNQQDK---AIDDFSKAIS 200
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
P PY +GI Y L D A F F + N E + + + + G+K
Sbjct: 201 LAPNSPEPYNGRGISYIALNDNDNA---FADFNHAIELNGNIAESWANQALVYERRGDKA 257
>gi|300856774|ref|YP_003781758.1| hypothetical protein CLJU_c36150 [Clostridium ljungdahlii DSM
13528]
gi|300436889|gb|ADK16656.1| TPR-repeat-containing protein [Clostridium ljungdahlii DSM 13528]
Length = 303
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLK-AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
KL++A+++ +++ EL E ++ A + G+SE A ++E L D AY+
Sbjct: 21 NKLIKALNLYNKVYELSNGEDIDSIINLALIYDTLGKSEKAKAYYKEALDIDNCEERAYY 80
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALRV 280
GL YD E E+A++ K + + +A + + ++
Sbjct: 81 GLAAIYDD--------EGNYEQAIKLYNKAIYINPNYHKAYFFLANAYDLSGEKDLSIET 132
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
YE+L+ P DF L G IY + D A K+F K ++ P N+
Sbjct: 133 YEKLLSLNPTDFWANLNLGSIYEEQNQNDLAYKKFSKALKIDPNNY 178
>gi|189464506|ref|ZP_03013291.1| hypothetical protein BACINT_00848 [Bacteroides intestinalis DSM
17393]
gi|189438296|gb|EDV07281.1| tetratricopeptide repeat protein [Bacteroides intestinalis DSM
17393]
Length = 586
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 20/193 (10%)
Query: 140 QH-LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
QH L+ NPN AL + + + +++ + +++ +E +P+ + + A + E
Sbjct: 73 QHCLSINPNASSALYEISQYYMFLKQVPQGQAALEKAVENDPDNYWYSQGLASLYQQQNE 132
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAY------DGSDKKLNEVEKRIEKAMERCKKEK 252
+ A E ++ + P +++A + L+ Y D LN +E+++ K E+ EK
Sbjct: 133 MQKATDLLESMVTRFPDKMDALYSLLEIYNRLEEYDNVITTLNRLEEKMGKN-EQLSMEK 191
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
F++ + Q+K +S A R E LV+E P D R + G +Y KKDEA
Sbjct: 192 -------FRIYL-QMKDNQS----AFREIESLVEEYPMDMRYQVVLGDVYMQNGKKDEAY 239
Query: 313 KQFEKFRRLVPRN 325
++K P N
Sbjct: 240 NMYKKVLATEPDN 252
>gi|220907546|ref|YP_002482857.1| hypothetical protein Cyan7425_2135 [Cyanothece sp. PCC 7425]
gi|219864157|gb|ACL44496.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 373
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 19/207 (9%)
Query: 125 AREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE 184
ARED Y+ ++Q + NPN EA ++ + EA+ +D+ I+L PN
Sbjct: 63 ARED--YQGAIAAVDQAIRLNPNYAEAYLMRGSIQTELGNYQEAIADLDQGIKLNPNNAS 120
Query: 185 WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRI- 241
++ +Q +G + A+ + +++R P AY G + +L+ ++ I
Sbjct: 121 AYFIRGSIQLESGNLQGALADYNQVIRLYPNEANAYFIRGAIQL------QLDNLQGAIA 174
Query: 242 --EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQG 299
+ ++ E K +R I+ + EA+ + + ++ P D Y +G
Sbjct: 175 DFNRGIKLNPNEAKAYFIR------GTIQAGLGNYQEAIADFGQEIRLSPNDPLAYHRRG 228
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+ A +++ RL P H
Sbjct: 229 DLRAYTGDLQGAIADYDQVIRLSPNCH 255
>gi|115378507|ref|ZP_01465664.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310819976|ref|YP_003952334.1| hypothetical protein STAUR_2709 [Stigmatella aurantiaca DW4/3-1]
gi|115364476|gb|EAU63554.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309393048|gb|ADO70507.1| tetratricopeptide repeat protein [Stigmatella aurantiaca DW4/3-1]
Length = 1369
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
EK + L P++ EAL + V+ K + A+D + +E P+ ++ +
Sbjct: 1138 EKNLMLALNREPSNHEALYYVAMVKAKRAEYTGAIDQMKSAVEKAPHRADYHYALGVIYR 1197
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
A AI ++E +++DP + Y L AY ++ K++E E A+ K K+
Sbjct: 1198 DAERLPEAIAEWKETIKRDPNHADTYEQLGKAYLETN-KMDEAIPAFESALAADPKRKR- 1255
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
I + E + EA+R YE+ +KE P
Sbjct: 1256 -----VLGAIGDVFFSEGRWDEAIRRYEKALKEAP 1285
>gi|256075180|ref|XP_002573898.1| tetratricopeptide repeat protein 10 tpr10 [Schistosoma mansoni]
Length = 704
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P + + ++ L I+SQ +A+ +R ++PN+ +WQL+ A +G + A++
Sbjct: 478 PCNFDVIEWLGAYYIESQFCEKAIAYFERASLMQPNQIKWQLMIASCHRRSGNYQQALET 537
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
+ I R+ P +E LV SD L E + I K ++R +K K+ + R
Sbjct: 538 YRIIHRRFPENIECLQFLVRL--SSDMDLPEAQDYITK-LKRAEKLKQAREQR 587
>gi|163758902|ref|ZP_02165989.1| O-linked GlcNAc transferase [Hoeflea phototrophica DFL-43]
gi|162284192|gb|EDQ34476.1| O-linked GlcNAc transferase [Hoeflea phototrophica DFL-43]
Length = 282
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 74/191 (38%), Gaps = 10/191 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + + + NP+D E +S + A+D +R ++L P+ F+ +A
Sbjct: 51 EENIASLTEVIRRNPSDPEGYNVRGAAYGRSGQFRNALDDFNRALQLNPSFFQAYANRAL 110
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ G A + L+ +P AY G Y + + NE +A+ +
Sbjct: 111 IHRSMGNVVEAANDYNRALQINPRYDVAYIGRGNLYRQAGRN-NEAMADYNRAINLETTD 169
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ R IK + +H +A+ + + P PY +GI Y L ++
Sbjct: 170 PRAYHNRGL------IKQLRGQHPQAIEDFSTSISLAPNSPEPYNGRGISYVAL---NDD 220
Query: 312 EKQFEKFRRLV 322
E F F R +
Sbjct: 221 ENAFSDFNRAI 231
>gi|398835791|ref|ZP_10593148.1| TPR repeat-containing protein, partial [Herbaspirillum sp. YR522]
gi|398215229|gb|EJN01794.1| TPR repeat-containing protein, partial [Herbaspirillum sp. YR522]
Length = 554
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGL 223
VEA+ +DR + L P+ E +L + G + AA+ F+ +L +P A+ G
Sbjct: 93 VEALQSLDRALALNPDFNEARLAQGSSLRQIGRAGAALDAFDRVLESEPGNANAWFQRGN 152
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEE 283
V+ K+L+E + E+A+E + D + +A + + +AL+ YE
Sbjct: 153 VLH---DLKRLDEATQCYERAIEL------QPDFVEALFNLANTQKDTEQLEQALQTYER 203
Query: 284 LVKEEPRDFRPYLC-QGIIYTLLRKKDEAEKQFEK 317
VK P DF L +G + +LL + EA +E+
Sbjct: 204 AVKAAP-DFAIALVNRGYVQSLLNRPQEALDSYEQ 237
>gi|397781376|ref|YP_006545849.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939878|emb|CCJ37133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
Length = 1067
Score = 43.1 bits (100), Expect = 0.20, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP-NEFEWQLLKAQVQSYAGESE 200
L + D EA TL + + EA++ + +IE+ P N+ WQ + ++ + G E
Sbjct: 789 LKGDEGDAEAWYTLESALVHMGRYEEALECSNSIIEVSPENQAAWQR-RGEIFMWLGRYE 847
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKKKSDLR 258
A+ FE++L DP+ L A NE R E+A+ + +++ +++
Sbjct: 848 EAVACFEKVLDADPMDTLTQRRLGEA--------NEKAGRYEEAIAAYTRVLDREPANIE 899
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+ + + ++ EA++ ++++ P + +G + + D+A +EK
Sbjct: 900 TLHARASAL-IHLGRYGEAIKSIDKIIVILPENPAVLFMRGAVLEKAGRYDDALVSYEKA 958
Query: 319 RRLVPRN 325
++ P+N
Sbjct: 959 LQVAPKN 965
Score = 41.2 bits (95), Expect = 0.83, Method: Composition-based stats.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 15/199 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE E+ L A+P D + L E K+ + EA+ R+++ EP E +A
Sbjct: 846 YEEAVACFEKVLDADPMDTLTQRRLGEANEKAGRYEEAIAAYTRVLDREPANIETLHARA 905
Query: 191 QVQSYAGESEAAIKGFEEI---LRKDPLRVEAYHGLVMAYDGS-DKKLNEVEKRIEKAME 246
+ G AIK ++I L ++P V G V+ G D L EK ++ A +
Sbjct: 906 SALIHLGRYGEAIKSIDKIIVILPENP-AVLFMRGAVLEKAGRYDDALVSYEKALQVAPK 964
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
L D ++ +A+R ++ + D +LC+G+ + L
Sbjct: 965 NAAIWNATGMLLD----------ALGRYPDAIRSFDTAIDLGNADIHAWLCKGVALSHLG 1014
Query: 307 KKDEAEKQFEKFRRLVPRN 325
+ D+A ++ PR+
Sbjct: 1015 RHDQAVTCYDMVLGADPRH 1033
Score = 37.7 bits (86), Expect = 8.2, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 74/188 (39%), Gaps = 11/188 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y + + + L N D+ + L ++ EA +R++ P K
Sbjct: 132 YADVAEAYARALDGNSEDVVLQEKLGRTLERTGAYREAAACFERILRANPESPGAFARKG 191
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Y G+ A+ F+ +L DP ++A +G A E R + A + C
Sbjct: 192 AALLYRGDYSGAVASFDRVLAGDPHNLDALYGKARAL--------EHLGRFQDAAD-CYG 242
Query: 251 EKKKSDLRDFKLLIAQIKVM--ESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+D + L Q ++ +++EAL ++++ +P + G++Y L +
Sbjct: 243 MITAADPGNTPALHHQGSLLLRSGRYAEALECFDKVALADPDNMAVRYSMGLVYDTLGRY 302
Query: 309 DEAEKQFE 316
D A K F+
Sbjct: 303 DRAVKSFD 310
>gi|63054637|ref|NP_594604.2| anaphase-promoting complex subunit Apc3 [Schizosaccharomyces pombe
972h-]
gi|1709403|sp|P10505.3|APC3_SCHPO RecName: Full=Anaphase-promoting complex subunit 3; AltName:
Full=20S cyclosome/APC complex protein apc3; AltName:
Full=Nuclear alteration protein 2; AltName: Full=Nuclear
scaffold-like protein p76
gi|159884018|emb|CAA97347.2| anaphase-promoting complex subunit Apc3 [Schizosaccharomyces pombe]
Length = 665
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 29/202 (14%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL-LKAQVQSYAGESE 200
L NP E+ L ++ +A+ I+R I+L+P FE+ L+ S E E
Sbjct: 424 LETNPYSPESWCILANCFSLQREHSQALKCINRAIQLDPT-FEYAYTLQGHEHSANEEYE 482
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAY------DGSD---KKLNEVEKR-------IEKA 244
+ F + +R + A++GL M Y D +D ++ E+ I
Sbjct: 483 KSKTSFRKAIRVNVRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMI 542
Query: 245 MERCKKEKKKSDLRDFKLLI-----------AQIKVMESKHSEALRVYEELVKEEPRDFR 293
ERCK KK D D + A++ ++ H +AL E+L P +
Sbjct: 543 YERCKDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAIAPDEAN 602
Query: 294 PYLCQGIIYTLLRKKDEAEKQF 315
+ G I+ +RKK+ A K F
Sbjct: 603 VHFLLGKIFKQMRKKNLALKHF 624
>gi|386875205|ref|ZP_10117392.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
gi|386806978|gb|EIJ66410.1| tetratricopeptide repeat protein [Candidatus Nitrosopumilus salaria
BD31]
Length = 396
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +PN+I AL + E+ K +++ + D+++ ++P+ + L KA Q G +
Sbjct: 245 LDVDPNNILALLGMAELNFLEDKNIKSDQLYDKVLSMDPDNVDALLGKANNQERLGHLDD 304
Query: 202 AIKGFEEILRKDPLRVEAYHG 222
++K F+E L DP +EA +G
Sbjct: 305 SLKYFDEALEVDPDNLEAANG 325
>gi|392410767|ref|YP_006447374.1| Tfp pilus assembly protein PilF [Desulfomonile tiedjei DSM 6799]
gi|390623903|gb|AFM25110.1| Tfp pilus assembly protein PilF [Desulfomonile tiedjei DSM 6799]
Length = 481
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/213 (18%), Positives = 98/213 (46%), Gaps = 32/213 (15%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +P +I AL ++ + + EA++ I++++ ++P + + ++L ++ +G +
Sbjct: 117 LVCDPQNITALYNRASLKSRQNQNKEALEDINQVLRIDPRQKKARVLLGKIHIVSGLPDK 176
Query: 202 AIKGFEEILRKDPLRVEAYHG-----------------------------LVMAYDGSDK 232
A+K F+ +L DP +VEA G L M +
Sbjct: 177 ALKEFQTVLTGDPEQVEALAGSGDAHFLSSRFSEAVTYYSEALKRQPTPLLYMNRCSALL 236
Query: 233 KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF 292
KLN+ +K +E E + + + F L ++ + ++H+EA+ + + ++ +
Sbjct: 237 KLNDPDKALEDCTESVRLDPNNPE--GFYNLGNCMQAL-NRHTEAVEAFSKAIEINEQTP 293
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
R + +G+ + L + ++A + F++ + P++
Sbjct: 294 RYFYNRGVSLSKLGESEKAGRDFDQVLHMNPKH 326
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 144 ANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAI 203
A+ + +E L E I+S EA++++D+ EL+P K + + + +AA+
Sbjct: 17 ASADSLEELFERAETAIRSGDTTEAMELLDKAEELDPKNPAISNNKGVIHAKNRDWDAAL 76
Query: 204 KGFEEILRKDPLRVEAYHGLVMAY----DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
+ F L DP EAY M Y D S L+ + C D ++
Sbjct: 77 ESFNRALEFDPAYAEAYTNRGMVYQEQGDFSQALLDYSRALV------C-------DPQN 123
Query: 260 FKLLI--AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L A +K ++++ EAL ++++ +PR + + G I+ + D+A K+F+
Sbjct: 124 ITALYNRASLKSRQNQNKEALEDINQVLRIDPRQKKARVLLGKIHIVSGLPDKALKEFQ 182
>gi|425444768|ref|ZP_18824811.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9443]
gi|389735431|emb|CCI01072.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9443]
Length = 707
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 33/228 (14%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW--QLLKAQVQSYA 196
+Q L NP+ +EA Q + + Q+ EA+ + ++ I++ P+ W L + Q
Sbjct: 356 DQALKINPDYLEAFQGKADALLALQRYSEALIIYEKAIQINPDS-AWPAWLGRGQALDKL 414
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGL------VMAYDGSDKKLNEVEK-RIEKAMERCK 249
G+++ A++ FE +L +P +A+ G + Y + K L+++ + A K
Sbjct: 415 GKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYK 474
Query: 250 KEKKKSDLRDFKLLIA---QIKVMES-----------------KHSEALRVYEELVKEEP 289
K +L D++ + Q +ES K +EAL Y + + P
Sbjct: 475 KGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSWYQLNKINEALESYSKAGQFNP 534
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMV 337
+ + + QGII L +K EA E F + N Y + +++ +
Sbjct: 535 QFSQAHYSQGIILQKLGRKPEA---LEAFTQATKANSNYYQAWLNQGI 579
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 99/228 (43%), Gaps = 20/228 (8%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +D+L+ + N+ + K
Sbjct: 418 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGW 477
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDG-SDKKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G S +LN++ + +E + +
Sbjct: 478 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSWYQLNKINEALESYSKAGQF 532
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q + EAL + + K ++ +L QGI+ + + E
Sbjct: 533 NPQFSQAHYSQGIILQ---KLGRKPEALEAFTQATKANSNYYQAWLNQGILLHQMERFKE 589
Query: 311 AEKQFEKFRRLVPR---------NHPYREYFVDNMVATKIFGEKVDRE 349
A +EK RR+ + N YR DN A + + + R+
Sbjct: 590 AIASYEKARRISSQKAEVFIGIGNAWYR--LGDNYQAINAYQQAIQRQ 635
>gi|92114109|ref|YP_574037.1| sulfotransferase [Chromohalobacter salexigens DSM 3043]
gi|91797199|gb|ABE59338.1| sulfotransferase [Chromohalobacter salexigens DSM 3043]
Length = 1415
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 16/219 (7%)
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
S K +S+ ++ + K++++H P D +A TL +++ ++ +A +++ E
Sbjct: 2 SKKRHSSSTNKLTLPQARKQVQRH----PTDPDAWLTLGKLQAGQKEFYDAKASLEKARE 57
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV 237
L PN E + V + A++ ++ L P L Y K
Sbjct: 58 LRPNHHEQEEWLGYVAHKQHRLQDALQHLQDALELAPNSAFGLATLSYLYLDMGKPY--- 114
Query: 238 EKRIEKAMERCKKEKKKS--DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
K++E KK + S LR L + + +++EAL +Y++L+K P + P+
Sbjct: 115 -----KSIEYAKKAWQFSPKSLRVLDSLANSLSAL-YRYNEALDIYDQLIKLTPSSYIPW 168
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH-PYREYFV 333
G +Y L ++A + ++K L P N PY +
Sbjct: 169 NSAGNMYRELGLLNKAYRCYQKASALAPHNAIPYSNHLT 207
>gi|333910943|ref|YP_004484676.1| hypothetical protein [Methanotorris igneus Kol 5]
gi|333751532|gb|AEF96611.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanotorris
igneus Kol 5]
Length = 336
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 142 LAANPNDIEAL----QTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
L N D+E L TL+ + + L ++ ++++E + N ++ +
Sbjct: 125 LEINSEDLEVLCKKGYTLLRISLNEINL--SIKYFEKVLEKDENNYKALFGLGEAYYNLN 182
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKKKS 255
E AIK FE+IL+ +P VEA L Y EK EKA+ KK E K
Sbjct: 183 NEENAIKYFEKILKLNPNDVEALEYLGDIY---------YEKDYEKAINYYKKALELKPK 233
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF---RPYLCQGIIYTLLRKKDEAE 312
D+ + L IA V K+ +AL+ +E+ + P F + Y G IY L + ++A
Sbjct: 234 DV-NLILKIAHSYVELKKYEDALKYFEKALSLNPDVFELEQIYEFMGRIYIYLGEDEKAM 292
Query: 313 KQFEKFRRLVP 323
+ FEK + + P
Sbjct: 293 EYFEKLKEINP 303
>gi|359409222|ref|ZP_09201690.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675975|gb|EHI48328.1| Flp pilus assembly protein TadD [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 727
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF----EWQ 186
++E E++ + L NP I +L L V ++ + + A+ + I+++PN
Sbjct: 204 FKEAEEKYNEALRLNPKSINSLFNLGNVYLEKKNFLRAIQYFGQTIQIDPNAHNAFNNLG 263
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
L AQ+ G++ AI+ ++ + +P + L AY + +N EK IE
Sbjct: 264 LCLAQI----GDNTKAIQAYKNSISINPNNSNVHFNLGNAY----RDVNRNEKAIESYKN 315
Query: 247 RCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
+ + L D +L+A+ + EAL Y+ + D R +L G +Y
Sbjct: 316 GLAIDPLNAVYLNDLGILLAE----NDRVDEALSAYQASLDITGGDARTFLNIGNLY--- 368
Query: 306 RKKDEAEKQFEKFRRLVPRNHPYREYF 332
+ +E E + + + Y + +
Sbjct: 369 KNNNEIENAISAYNKALKLKMDYADVY 395
>gi|291570823|dbj|BAI93095.1| serine/threonine protein kinase containing TPR domain [Arthrospira
platensis NIES-39]
Length = 759
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 174 RLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ +EL+PN + K + GE + A+ E+ + DP A+HG +A G +
Sbjct: 408 KALELDPNNPDLLTSKGTLLYQMGEPQKALDTHEQAIAIDPNYARAWHGKGIALIGLQRY 467
Query: 234 LNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA---QIKVMESK--HSEALRVYEELVKEE 288
VE A ++ K + + IA Q K+ E+ +SEAL Y+++++E+
Sbjct: 468 DEAVE-----AFDQAKTLRPSAPSVWQSKAIALEYQGKMAEAAQVYSEALATYDDILREQ 522
Query: 289 PRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
PR ++ +G + + L + ++A + +EK + P
Sbjct: 523 PRRAEIWVERGSVLSKLGRHEQALESYEKALEINP 557
>gi|77021665|gb|ABA60691.1| polaris [Danio rerio]
Length = 824
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 8/107 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I ++ L I +Q +A+ +R ++P + +WQL+ A +G A++
Sbjct: 618 PSNISVIEWLGAYYIDTQFCEKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYLKALET 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAME 246
++EI RK P VE LV +D L EV+ K++EK E
Sbjct: 678 YKEIHRKFPENVECLRFLVRL--CTDMGLKEVQDYATKLKKVEKMKE 722
>gi|409992341|ref|ZP_11275537.1| hypothetical protein APPUASWS_14728, partial [Arthrospira platensis
str. Paraca]
gi|409936782|gb|EKN78250.1| hypothetical protein APPUASWS_14728, partial [Arthrospira platensis
str. Paraca]
Length = 496
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 174 RLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
+ +EL+PN + K + GE + A+ E+ + DP A+HG +A G +
Sbjct: 145 KALELDPNNPDLLTSKGTLLYQMGEPQKALDTHEQAIAIDPNYARAWHGKGIALIGLQRY 204
Query: 234 LNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA---QIKVMESK--HSEALRVYEELVKEE 288
VE A ++ K + + IA Q K+ E+ +SEAL Y+++++E+
Sbjct: 205 DEAVE-----AFDQAKTLRPSAPSVWQSKAIALEYQGKMAEAAQVYSEALATYDDILREQ 259
Query: 289 PRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
PR ++ +G + + L + ++A + +EK + P++
Sbjct: 260 PRRAEIWVERGSVLSKLGRHEQALESYEKALEINPQH 296
>gi|408378865|ref|ZP_11176461.1| O-linked GlcNAc transferase [Agrobacterium albertimagni AOL15]
gi|407747315|gb|EKF58835.1| O-linked GlcNAc transferase [Agrobacterium albertimagni AOL15]
Length = 291
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 18/204 (8%)
Query: 122 TTSAREDVSYEEKEKEIEQHLAA-------NPNDIEALQTLMEVRIKSQKLVEAVDVIDR 174
TT+ DV ++ + E+++A+ NP D E ++ + +A+D +
Sbjct: 40 TTTETTDVIRLDRAQGSEENIASLTAVIQSNPRDPEGYNVRGSAYGRAGQFRQALDDFNT 99
Query: 175 LIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKL 234
++L P F+ +A V G+ A + L+ +P AY G Y + ++
Sbjct: 100 ALQLNPQFFQAYANRALVYRNMGKPVEAAADYNAALKINPNYDVAYIGRGNIYRQA-GRI 158
Query: 235 NEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRVYEELVKEEPRDF 292
+E +A+ + +D R F + LI Q++ H++A+ + + + PR
Sbjct: 159 DEAFGDFNRAI-----QLDTTDGRAFHNRGLIYQLR---GDHAKAIDDFSKAISLSPRAP 210
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFE 316
PY +G+ Y L D A F
Sbjct: 211 EPYNGRGVSYVALNDDDNAFADFN 234
>gi|158261895|dbj|BAF83125.1| unnamed protein product [Homo sapiens]
Length = 899
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|408790965|ref|ZP_11202576.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
serovar Hardjo str. Went 5]
gi|408464994|gb|EKJ88718.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira meyeri
serovar Hardjo str. Went 5]
Length = 700
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 12/180 (6%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+++ L P+D+++L L E+ K +LVEA + R+I L P + + +
Sbjct: 377 LKKALLLKPSDVDSLFALSELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILD 436
Query: 198 ESE---AAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK-RIEKAMERCKKEKK 253
E E +I FE L +P AY+ L +AY + K +E R +A++ +
Sbjct: 437 EMERYSESITSFEGALALNPKNQSAYYNLGLAYLHAGKPTMAIESLRKSQALDPNHTQS- 495
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+L IA + +SEA+ YEE + +P + L +Y + AEK
Sbjct: 496 -------RLAIADYYLENRFYSEAIAEYEEAIAWKPELYEARLKLADVYIQTKNYPAAEK 548
>gi|383455060|ref|YP_005369049.1| hypothetical protein COCOR_03073 [Corallococcus coralloides DSM
2259]
gi|380728988|gb|AFE04990.1| TPR repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 460
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
E+ +A +P E L R++S++ A+ + + +EL P W+L A+ + G
Sbjct: 130 FERAIALSPTTAEFHYRLGVARLESEQYAAALGPLRKAVELTPERAGWKLPLAKALARTG 189
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN---EVEKRIEKAMERCKK---- 250
++ A++ ++R +P E + +D N E ++E+ M +
Sbjct: 190 DTAGAVEALGTVVRGNPTPAEVATARALMNPLADPFQNFPKAAEAKLEEGMRYLHELDAP 249
Query: 251 -------EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL---VKEEPRDFRPYLCQGI 300
E+ D D ++ A + + + +A R +E ++ P+D + L G
Sbjct: 250 QHALIAFEEILHDYPDLAVVHALLGLAYQRLDDAGRAVDEFKQAIERAPQDGKNQLYLGE 309
Query: 301 IYTLLRKKDEAEKQFEKFRRLVP 323
+Y ++ D A FEK L P
Sbjct: 310 LYLTRQRTDAARTAFEKAVALNP 332
>gi|85858278|ref|YP_460480.1| hypothetical protein SYN_01095 [Syntrophus aciditrophicus SB]
gi|85721369|gb|ABC76312.1| TPR repeat-containing protein [Syntrophus aciditrophicus SB]
Length = 649
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 95/226 (42%), Gaps = 32/226 (14%)
Query: 122 TTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN 181
+S ++ S +E + + +A NP + TL ++ + +K+ EA + ++I LEP
Sbjct: 185 ASSHLQNNSIKEAQDALNTGIADNPKAVILYLTLADLYTRDKKIDEAAATLQKVIALEPK 244
Query: 182 EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP------LRVEAYH-------------- 221
++L A + + G+++ A+ +E++ +P L+V ++
Sbjct: 245 NSRYRLTLAGLYWHVGQNDKAVATLQEVVAAEPANEEGRLQVGGFYIARGRFADAERELK 304
Query: 222 --------GLVMAYDGSDKKLNE-VEKRIEKAMERC---KKEKKKSDLRDFKLLIAQIKV 269
+ + SD LN + R + C +K+ + K +A+I +
Sbjct: 305 AGIQAIPKSFKLRFALSDLYLNTGMPDRAISLLNECLALEKDAGNPQILQTKNALARIHL 364
Query: 270 MESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+ EA R +E++KE +D + +G I L R A +F
Sbjct: 365 ARQEVKEASRYVDEVIKENSKDVDAHFTKGNIALLKRDGAGAVAEF 410
>gi|398347008|ref|ZP_10531711.1| hypothetical protein Lbro5_07209 [Leptospira broomii str. 5399]
Length = 374
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 44/231 (19%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+++E E Q L NP D + L + Q+ +A+ ++L+ ++P+
Sbjct: 139 NFKESEVYYMQALQINPKDQYVIVGLGHLFFACQRYKDAIHWWEKLLVIQPDNI------ 192
Query: 190 AQVQSYAGESEAAIKGFEEILRK-------DPLRVEAYHGLVMAYDGSD--KKLNEVEKR 240
++ + G S IK F+E ++ DP A +GL +Y G +K NE +R
Sbjct: 193 -KILTEIGNSYRKIKDFDEAIQYYRRAADLDPRNFFALYGLAESYRGKKDFRKANEFWER 251
Query: 241 I------------------------EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHS- 275
I +KA+E C + S+ D+ L+ + ++ K S
Sbjct: 252 ILEFDPDNKLIINRYADSLRGMGEYDKALE-CFN-RILSEGEDYFALLGKASSLKLKGSR 309
Query: 276 -EALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+A +Y +L K+ P D RP + +Y + KKD+A K E+F R P N
Sbjct: 310 DKAEEIYLDLHKKFPMDPRPVIELSELYYDISKKDDAVKILEEFHRKQPLN 360
>gi|225620560|ref|YP_002721817.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215379|gb|ACN84113.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 257
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
EA+ D+ IEL PN+ ++ + + G+ E AIK +++ + +P ++Y+ +A
Sbjct: 55 EAIKDYDKAIELNPNDIDFYNDRGIAKYNLGQYEEAIKDYDKAIELNPNDSDSYNNRGIA 114
Query: 227 YDGSDKKLNEVEKRI---EKAMERCKKEKKKSDLRDF-KLLIAQIKVMESKHSEALRVYE 282
K L + E+ I +KA+E + R K + Q + EA++ Y+
Sbjct: 115 ----KKNLGQYEESIKDYDKAIELNHNYSNAYNNRGIAKKYLGQ-------YEEAIKDYD 163
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ ++ +P D Y +G+ L + EA K F+K L P
Sbjct: 164 KTIELDPNDSNAYNNRGLAKGNLGQYKEAIKDFDKSIELNP 204
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE K+ ++ + NPND ++ + + E++ D+ IEL N +
Sbjct: 87 YEEAIKDYDKAIELNPNDSDSYNNRGIAKKNLGQYEESIKDYDKAIELNHNYSNAYNNRG 146
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
+ Y G+ E AIK +++ + DP AY+ +A
Sbjct: 147 IAKKYLGQYEEAIKDYDKTIELDPNDSNAYNNRGLA 182
>gi|257062263|ref|YP_003142321.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
gi|256592523|gb|ACV03373.1| TPR repeat-containing protein [Cyanothece sp. PCC 8802]
Length = 279
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 19/180 (10%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A+ ++ I+L PN +E + V + E AIK FE+ ++ P +A+HG +AY
Sbjct: 78 AIQDFNKSIKLNPNYYEAYRGRGFVYGKQEKYEEAIKDFEKAIKIKPKYAQAFHGQGIAY 137
Query: 228 DGSDKKLNEVEKRIE---KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
KL EK +E KA++ + + + R IA I+ ME K+ +AL +++
Sbjct: 138 ----TKLGNYEKALENFRKAIQNNPQYAEAFNGRG----IAYIQ-ME-KYRQALNDFDKA 187
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGE 344
+K +GI Y +++ +EK E F +++ + Y E +++ ++GE
Sbjct: 188 IKFNSNYIEAIYNKGIAY---KQQGNSEKAIEAFTQVIQIDSDYLEAYIERGY---VYGE 241
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+YE+ + + + NP EA I+ +K +A++ D+ I+ N E K
Sbjct: 142 NYEKALENFRKAIQNNPQYAEAFNGRGIAYIQMEKYRQALNDFDKAIKFNSNYIEAIYNK 201
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMER 247
G SE AI+ F ++++ D +EAY G V G + +KA+E
Sbjct: 202 GIAYKQQGNSEKAIEAFTQVIQIDSDYLEAYIERGYVYGELG----------KYKKAIED 251
Query: 248 CKKEK-KKSDLRDFKLLIAQIKVMES 272
C+K + K S ++ L IA+ K ++
Sbjct: 252 CEKARNKNSKSQEAYLCIAKFKNIKG 277
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
++ + + NPN EA + V K +K EA+ ++ I+++P Q Q +Y
Sbjct: 80 QDFNKSIKLNPNYYEAYRGRGFVYGKQEKYEEAIKDFEKAIKIKPK--YAQAFHGQGIAY 137
Query: 196 A--GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEKRIE 242
G E A++ F + ++ +P EA++G +AY +K LN+ +K I+
Sbjct: 138 TKLGNYEKALENFRKAIQNNPQYAEAFNGRGIAYIQMEKYRQALNDFDKAIK 189
>gi|452211222|ref|YP_007491336.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
gi|452101124|gb|AGF98064.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
Length = 1085
Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
++ D A E ++Y +Q L N D EALQ + EAV + L+E
Sbjct: 675 TSSDLGRAEEAIAY------YDQLLKLNSTDSEALQGKSLALASLGRYDEAVACFNPLLE 728
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV 237
LEP E +A + +G EAA++ ++ I++ DP +A +A S L E+
Sbjct: 729 LEPENVEALEGRAFALARSGRPEAALEDYDVIMKLDPTNSKA-----LAEKAS--LLEEL 781
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES--KHSEALRVYEELVKEEPRDFRPY 295
+ E A+ + + + R+ ++ Q K +E+ A+ Y++++ +P++
Sbjct: 782 GRYDEAALTYGEILEITPENRE--IMYRQGKALEAMGDFEAAIACYDKILALDPKNIDAI 839
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYF 332
+G + + K EA ++K P N P YF
Sbjct: 840 NNKGFALSKMEKYQEALATYDKALEYDPDN-PAAWYF 875
>gi|323137815|ref|ZP_08072890.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. ATCC 49242]
gi|322396818|gb|EFX99344.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. ATCC 49242]
Length = 290
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP+ EA T + + EA+ + I+L+PN +A Q G++EAA
Sbjct: 74 NPSSAEAYNTRGVAYARVGRFNEAIADFTQAIKLDPNSAAAYTNRALAQRQIGQNEAARN 133
Query: 205 GFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
F+ ++ +P AY G L+ A D+ L++++ I E + +
Sbjct: 134 DFDHAIQVNPNHAPAYVGRANLLRAQGNLDQALSDLDTAIRLNPESAQAFHARG------ 187
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
LI Q + ++ A+ ++ + +P PY +G L K D+A + F
Sbjct: 188 -LIHQKR---GDNARAVTDFDNAIDRDPFAAAPYQARGESLVALGKYDKAVEDFN 238
>gi|166365801|ref|YP_001658074.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
gi|166088174|dbj|BAG02882.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
Length = 707
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 99/225 (44%), Gaps = 35/225 (15%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ--LLKAQVQSYAG 197
Q L NP+ +EALQ + + ++ EA++ ++ I++ P+ WQ L + Q G
Sbjct: 357 QALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDS-AWQAWLGRGQALDKLG 415
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME--------RCK 249
+++ A++ F+ +L +P +A+ G Y ++ + +K +EK + K
Sbjct: 416 KNQEALESFDRVLSFNPAASQAWQGKADIYL-ELQQYSAAQKALEKLLTFQQNDAKIWYK 474
Query: 250 KEKKKSDLRDFKLLIA---QIKVMES-----------------KHSEALRVYEELVKEEP 289
K +L D++ + Q +ES K ++AL Y + + P
Sbjct: 475 KGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKANSLYQLNKINDALESYSKAGQFNP 534
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+ + + QGII L +K EA E F + N Y + +++
Sbjct: 535 QFSQAHYSQGIILQKLGRKSEA---LEAFTQATKANSNYYQAWLN 576
>gi|118443609|ref|YP_878401.1| hypothetical protein NT01CX_2328 [Clostridium novyi NT]
gi|118134065|gb|ABK61109.1| conserved protein, tetratricopeptide repeat family protein
[Clostridium novyi NT]
Length = 312
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV 237
L N+ E L A + GE A + ++EIL D AY+GL + +D + + NE
Sbjct: 43 LGKNDTELILDMALIYDEKGEDIRAAEKYKEILNIDEKDERAYYGLAIIHDNRE-EYNEA 101
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
K +KA+E K R F L + K EA++ Y+E++K + DF L
Sbjct: 102 IKYYKKAIEINSKYN-----RAFFFLAGAYDAIGQK-EEAIKCYKEVLKMDSNDFWANLN 155
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
G IY L + + A F K + P ++
Sbjct: 156 LGSIYEELGQNNLAIDMFNKSLNIDPYHY 184
>gi|113475613|ref|YP_721674.1| hypothetical protein Tery_1947 [Trichodesmium erythraeum IMS101]
gi|110166661|gb|ABG51201.1| Tetratricopeptide TPR_2 [Trichodesmium erythraeum IMS101]
Length = 564
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ + ++ L+ N +A + V ++ +A+ D+ I++ PN+++ KA
Sbjct: 88 YEQAVEAYKRSLSLKQNAHQAWHSYGVVLSNLKQYEQAIACFDKAIKINPNDYQSWFNKA 147
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ S + AI ++E L+ P++ E ++ G + L V+K E
Sbjct: 148 IILSELKQDLPAIYCYKEALKIQPMKGEIWY-------GQGQALLNVQKYAEALAAYDCA 200
Query: 251 EKKKSDLRD--FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
K + D D FK +A + +++EA+ Y ++ +P ++ + GI + L K
Sbjct: 201 AKLQPDNYDIWFKRGLALFQT--QRYAEAVISYGHAIELQPENYLGWFNLGIAQSKLHKY 258
Query: 309 DEAEKQFEKFRRLVPRNH 326
+A F K +L P ++
Sbjct: 259 HDAVSSFNKAIKLNPDDY 276
>gi|406981787|gb|EKE03184.1| hypothetical protein ACD_20C00234G0006 [uncultured bacterium]
Length = 352
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLK-AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
EA+ +ID+ +P + W + K A + G+ A +++ L P R+E +
Sbjct: 189 EAIKLIDKE-AFKPRKDPWYMAKLAGLYEQVGKYNRAAGLYDKALDLKPGRIELLYSYAY 247
Query: 226 AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLL---IAQIKVMESKHSEALRVYE 282
D KL++ EK + K +E K F L + I + ++ EAL+ Y
Sbjct: 248 CL-YKDDKLDKAEKNMNKVLEIDPK---------FTLAHYHLGNIHFKDGEYYEALKSYN 297
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
E +K P Y G+I ++ KKD A K +++
Sbjct: 298 EAIKLNPLSADAYYNTGLILEIMGKKDLAAKYYDR 332
>gi|22760766|dbj|BAC11325.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 535 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 594
Query: 204 KGFEEILRKDPLRVEAYHGL-VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L ++A D DKK NE E ++KA+ K ++D R
Sbjct: 595 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 646
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 647 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 705
Query: 321 LVPRN 325
+ P N
Sbjct: 706 MDPSN 710
>gi|291392959|ref|XP_002712851.1| PREDICTED: intraflagellar transport 88 homolog [Oryctolagus
cuniculus]
Length = 831
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEA---YHGL-VMAYDGSDKKLNEVE------KRIEKAME 246
+++I +K P VE Y GL + +D L EV+ KR+EK E
Sbjct: 678 YKDIHKKFPENVECKXYYFGLRFLVRLCTDIGLKEVQEYATKLKRLEKMKE 728
>gi|297569750|ref|YP_003691094.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925665|gb|ADH86475.1| TPR repeat-containing protein [Desulfurivibrio alkaliphilus AHT2]
Length = 787
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA-GESEAAIK 204
PN+ A L +V ++ +L EA+ + R+ L P+ E L V A E A
Sbjct: 459 PNNFRAAIILGQVFQRNNELDEALQLFTRMNSLLPDNLEV-LHNLGVTHLARQEHREAAT 517
Query: 205 GFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
FEEIL K P A LV M D + V +IEKA + D++
Sbjct: 518 IFEEILSKRPDFTPALASLVAIKMQQRDLDAAIERVTAQIEKAPNQA----------DYR 567
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
LL+ ++ + + A+ + + +P RPYL + T + DEA ++
Sbjct: 568 LLLGELHLAGNDFDAAITALRQAQELDPAALRPYLLIARLMTETGRTDEAIAEY 621
>gi|449460409|ref|XP_004147938.1| PREDICTED: heat shock protein STI-like [Cucumis sativus]
gi|449529664|ref|XP_004171818.1| PREDICTED: heat shock protein STI-like [Cucumis sativus]
Length = 577
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E K + L NPND++A K L E + ++ IEL+P + K
Sbjct: 404 YPEAVKHYSESLRRNPNDVKAYSNRAACYTKLGALPEGLKDAEKCIELDPTFVKGYTRKG 463
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
+Q + E E A++ ++E L+ DP E G+
Sbjct: 464 AIQFFMKEYEKAMETYQEGLKHDPKNQELLDGI 496
>gi|333987314|ref|YP_004519921.1| hypothetical protein MSWAN_1100 [Methanobacterium sp. SWAN-1]
gi|333825458|gb|AEG18120.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 197
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGF 206
N+++A KS K EA++ D++++++P K G+++ A+ F
Sbjct: 9 NNVKAWNNKGINLGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYF 68
Query: 207 EEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQ 266
+++L DP EA++ +A++ K E K +K++E + S+ K +
Sbjct: 69 DKVLELDPKNAEAWNNKGLAFEDIG-KYQEAIKSYDKSLEL---DPNNSETWYNKGI--S 122
Query: 267 IKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+K +E K+ EAL+ + + +K P + +G+ L+K EA + F+K +L P
Sbjct: 123 LKKLE-KYQEALKSFNKALKSYPNYVDAWNNKGLALAQLKKYQEALECFDKVLKLDPN 179
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 272 SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
K+ EA+ +++++K +P++ R +G+ Y LL K EA F+K L P+N
Sbjct: 25 GKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLLGKAQEALDYFDKVLELDPKN 78
>gi|308275079|emb|CBX31678.1| hypothetical protein N47_E51900 [uncultured Desulfobacterium sp.]
Length = 801
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 25/196 (12%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L NP+DIEAL + ++ I S+ +A+ + +I+ +P + + +
Sbjct: 471 LKKNPDDIEALVMMGDLEILSKNQRKAISYYEEVIKHDPGSVTANYKMGVMHAAENNYKE 530
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD-F 260
A+K FE+ L +P A + ++ KLN EK++++A+ RC K+ S F
Sbjct: 531 AVKYFEKSLSVNPDYFPAMNMIIKI------KLN--EKKLDEALARCFKQVGISPKNTAF 582
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL--------CQGIIYTLLRKKDEAE 312
+L++ Q+ V++ A +E + P D R L QG I D+A
Sbjct: 583 RLMLGQLYVLKKDPEAARNSFETALTINP-DSREVLMAYANFEMSQGAI-------DQAI 634
Query: 313 KQFEKFRRLVPRNHPY 328
++EK R P N Y
Sbjct: 635 LKYEKLRSNNPDNPGY 650
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+Y+E K E+ L+ NP+ A+ ++++++ +KL EA+ + + + P ++L+
Sbjct: 527 NYKEAVKYFEKSLSVNPDYFPAMNMIIKIKLNEKKLDEALARCFKQVGISPKNTAFRLML 586
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
Q+ + EAA FE L +P E ++MAY + +++ I K
Sbjct: 587 GQLYVLKKDPEAARNSFETALTINPDSRE----VLMAYANFEMSQGAIDQAI------LK 636
Query: 250 KEKKKSDLRD---FKLLIAQIKVMESKHSEALRVYEELVKEEP 289
EK +S+ D + +L A + + ++ ++YEE++K+ P
Sbjct: 637 YEKLRSNNPDNPGYAILTAGLYEKKGDIKKSRQIYEEVLKKYP 679
>gi|198276859|ref|ZP_03209390.1| hypothetical protein BACPLE_03064 [Bacteroides plebeius DSM 17135]
gi|198270384|gb|EDY94654.1| caspase domain protein [Bacteroides plebeius DSM 17135]
Length = 930
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 92/189 (48%), Gaps = 28/189 (14%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+Y E+E +E+ ++ P ++ L L+ V I + + + ++ IDR++ ++PN + +K
Sbjct: 183 NYAEQENILEKAISKYPVSLDFLYNLVNVHIATNNMPKLLNTIDRILTIDPNNLQVLPIK 242
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA-YDGSDKKLNE---VEKRIEKAM 245
A++ G++ A+ ++ + P E GL A ++ + K +N+ + E A+
Sbjct: 243 ARILEKQGQNIEALDIYKRLYALAPNNFELLTGLARANFNVATKIVNDGATIASDTEYAL 302
Query: 246 ERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGI--IYT 303
R K A +ME++ +++ E++K++P D + Y+ QG+ +Y
Sbjct: 303 VRQK---------------ASTYLMEAQ-----KLFLEILKQKP-DSKMYM-QGLAGVYQ 340
Query: 304 LLRKKDEAE 312
+ E E
Sbjct: 341 YMDMTSEYE 349
>gi|194380400|dbj|BAG63967.1| unnamed protein product [Homo sapiens]
Length = 914
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|114646136|ref|XP_522486.2| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Pan
troglodytes]
gi|426373621|ref|XP_004053695.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Gorilla gorilla gorilla]
gi|410213978|gb|JAA04208.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410264382|gb|JAA20157.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410302722|gb|JAA29961.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410341671|gb|JAA39782.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410341673|gb|JAA39783.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
gi|410341675|gb|JAA39784.1| transmembrane and tetratricopeptide repeat containing 3 [Pan
troglodytes]
Length = 914
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|51476220|emb|CAH18100.1| hypothetical protein [Homo sapiens]
Length = 914
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|340504470|gb|EGR30909.1| tpr repeat protein [Ichthyophthirius multifiliis]
Length = 1212
Score = 42.7 bits (99), Expect = 0.27, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ +++ ++ NP I+A + EV +K +A+ +++++IE++ ++ + +
Sbjct: 319 YEDAILYLDKAISLNPYFIKAYKIKAEVLKNQRKYDDALIILEKVIEVDKQNLKYLIKQG 378
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Q+ + + +I FE+IL+ PL+ + Y G + E + EKA+ +K
Sbjct: 379 QLLMKLKQYQNSIDCFEKILQIYPLQENIFQ-----YIGKNYYYLE---KYEKALFYFEK 430
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
D F + +K +E K +A+ YE+ D+ YL +G Y L K E
Sbjct: 431 IVDNKDFDIFFFIGNILKKLE-KFEKAIEYYEKAQLINQNDYYIYLQKGDCYFFLGKFLE 489
Query: 311 A 311
A
Sbjct: 490 A 490
Score = 37.7 bits (86), Expect = 8.9, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH- 221
QK EA+D ++IE+ P+ E + K + E ++ +EE L K+P AY
Sbjct: 827 QKYDEAIDSFQKVIEINPDYLEAYIYKGNSFKKLQKYECSLLCYEEALSKNPEYEIAYFN 886
Query: 222 --GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKH-SEAL 278
+++ + + E+ + K ++ + +K I + E K EA+
Sbjct: 887 KGNILIHLQQYQESIFCFEQILSKNIKHAEAHYQKG-----------IALKEQKKFKEAI 935
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+E+ ++ + ++ Y QGI T +++ +A K +EK
Sbjct: 936 ESFEKAIEINEKYYQAYNNQGIALTEIQEYQKAMKCYEK 974
>gi|326511269|dbj|BAJ87648.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 842
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Query: 62 PSLLRTLTPLSSPLIKITSVTVAAAAL---LFMRLPFHSIKPAIAAPVAAAATVESTNES 118
PS R L L S L + A AL +F++ + + + + A
Sbjct: 375 PSHARALKLLGSALFGVGEYRAAEKALEEAIFLKPDYADAHCDLGSALHAVGD------- 427
Query: 119 TKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL 178
+D + EE +K I+ P ++AL L + + + + V A ++ R++ +
Sbjct: 428 --------DDRAVEEFQKAID----LKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSI 475
Query: 179 EPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
PN + QL KA GESE A K +E + RVE Y
Sbjct: 476 RPNHWRAQLNKAVALLGQGESEEAKKALKEAFKMTQ-RVEVY 516
>gi|326510261|dbj|BAJ87347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 842
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 23/162 (14%)
Query: 62 PSLLRTLTPLSSPLIKITSVTVAAAAL---LFMRLPFHSIKPAIAAPVAAAATVESTNES 118
PS R L L S L + A AL +F++ + + + + A
Sbjct: 375 PSHARALKLLGSALFGVGEYRAAEKALEEAIFLKPDYADAHCDLGSALHAVGD------- 427
Query: 119 TKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL 178
+D + EE +K I+ P ++AL L + + + + V A ++ R++ +
Sbjct: 428 --------DDRAVEEFQKAID----LKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSI 475
Query: 179 EPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
PN + QL KA GESE A K +E + RVE Y
Sbjct: 476 RPNHWRAQLNKAVALLGQGESEEAKKALKEAFKMTQ-RVEVY 516
>gi|300868026|ref|ZP_07112664.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
PCC 6506]
gi|300333946|emb|CBN57842.1| Serine/threonine protein kinase with TPR repeats [Oscillatoria sp.
PCC 6506]
Length = 702
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E + ++ + NP +EA K +K EA+ +R +E++P+ E K
Sbjct: 382 YKESREACDKAIQLNPEYLEAWTDRGYTLDKLEKYQEAIASFERALEIQPDYPEAWKGKG 441
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
E AI +E+ ++ P +A++ +A+ K+ + A + K+
Sbjct: 442 DALLNLQRYEEAIASYEKAVKSQPNFYDAWYSKGIAHQNL--------KQYQPAFDAYKQ 493
Query: 251 EKK-KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ KSD + +++ +K+ EA+ YE+ V+ +P ++ + +GI LR+ +
Sbjct: 494 AVELKSDNSKAWYNLGNVQLELNKNQEAVEAYEKAVRFQPTYYQAWYSRGIALMKLRQYE 553
Query: 310 EAEKQFEK 317
+A K +++
Sbjct: 554 DAAKAYKQ 561
>gi|238014474|gb|ACR38272.1| unknown [Zea mays]
Length = 489
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 25/163 (15%)
Query: 62 PSLLRTLTPLSSPLIKITSVTVAAAAL---LFMRLPFHSIKPAIAAPVAAAATVESTNES 118
PS R L L S L + A AL +F++ E ++
Sbjct: 22 PSHARALKLLGSALFGVGEYRAAEKALEEAIFLK--------------------EDYADA 61
Query: 119 TKDTTSAREDVSYEEKE-KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
D SA V +++ +E + + P ++AL L + + + + V A ++ R++
Sbjct: 62 HCDLGSALHAVGEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLS 121
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ PN + QL KA GESE A K +E + RVE Y
Sbjct: 122 IRPNHWRAQLNKAVALLGQGESEEAKKALKEAFKMTQ-RVEVY 163
>gi|425459650|ref|ZP_18839136.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
gi|389822559|emb|CCI29802.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9808]
Length = 736
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 35/225 (15%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ--LLKAQVQSYAG 197
Q L NP+ +EALQ + + ++ EA++ ++ I++ P+ WQ L + + G
Sbjct: 386 QALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDS-AWQAWLGRGEALDKLG 444
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME--------RCK 249
+++ A++ FE +L +P +A+ G Y ++ + +K +EK + K
Sbjct: 445 KNQEALESFERVLSLNPAASQAWQGKADIYL-ELQQYSAAQKALEKLLTFQQNDAKIWYK 503
Query: 250 KEKKKSDLRDFKLLIA---QIKVMES-----------------KHSEALRVYEELVKEEP 289
K +L D++ + Q +ES K + AL Y + + P
Sbjct: 504 KGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNP 563
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+ + Y QGII L + EA E F + N Y + +++
Sbjct: 564 QFSQAYYSQGIILQKLGRNSEA---LEAFTQATKANSNYYQAWLN 605
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +++L+ + N+ + K
Sbjct: 447 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGW 506
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G+ +LN++ +E + +
Sbjct: 507 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQF 561
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q ++SEAL + + K ++ +L QG + L + E
Sbjct: 562 NPQFSQAYYSQGIILQ---KLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQE 618
Query: 311 AEKQFEKFRRLVPR 324
A +EK RR+ R
Sbjct: 619 AIASYEKARRISSR 632
>gi|95929293|ref|ZP_01312037.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
gi|95134791|gb|EAT16446.1| Tetratricopeptide TPR_2 [Desulfuromonas acetoxidans DSM 684]
Length = 576
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD 213
L + + + +A D +++ + LEP+ +L+ A V G+++ AI+ F ++L +
Sbjct: 94 VLASIHLDRGQTQQAQDYLNQALVLEPHHLASELMLADVYHAQGKTDQAIQAFRQVLDRH 153
Query: 214 P------LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
P L + + + AYD +++ L + KR ++++ + +A +
Sbjct: 154 PDIEDVYLHISRLYLSLQAYDKAEQILLQWLKRQPQSVDGLME-------------LANL 200
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+ + +A+ Y + ++ P D R YL G + R+ DEA +++ R
Sbjct: 201 YRLRGDYQQAITTYRQAIELTPHDRRIYLPLGRLLEQQRQFDEALTLYDEAAR 253
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP---NEF 183
E Y E + +E + +P D+EAL L + I+ ++ EA + + + P F
Sbjct: 271 EQGRYSEALQRVESIVQHDPADVEALGKLGYIYIELERWSEAESMFRQALPYHPVSSQLF 330
Query: 184 EWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEK 243
W + Q E AI+ ++ + L+ EA + + Y+ +N ++K E
Sbjct: 331 YWLAFALEHQQ---RWEEAIQYYQLVEHPSALKKEALVRMSVTYN----HMNNLDKAAES 383
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
+ E +SD+R F L++ + ++ +AL V + ++ P+ Y QG+I+
Sbjct: 384 LVHLL--ELDQSDVRVFLQLVS-LYQRSQRYDDALSVLDRGIQRHPKVDDLYYSQGVIFE 440
Query: 304 LLRKKDEAEKQFEKFRRLVPRN 325
L +D E+ + L P++
Sbjct: 441 LRGLRDRTEQLMRETLTLNPQH 462
>gi|425466451|ref|ZP_18845749.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9809]
gi|389831011|emb|CCI26579.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9809]
Length = 707
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW--QLLKAQVQSYA 196
+Q L NP+ +EA Q + + Q+ EA+ + ++ I++ P+ W L + Q
Sbjct: 356 DQALKINPDYLEAFQGKADALLALQRYSEALIIYEKAIQINPDS-AWPAWLGRGQALDKL 414
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGL------VMAYDGSDKKLNEVEK-RIEKAMERCK 249
G+++ A++ FE +L +P +A+ G + Y + K L+++ + A K
Sbjct: 415 GKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYK 474
Query: 250 KEKKKSDLRDFKLLIA---QIKVMES-----------------KHSEALRVYEELVKEEP 289
K +L D++ + Q +ES K ++AL Y + + P
Sbjct: 475 KGWSLQNLEDYEGAVKAYDQALALESDNALIWYQKGNSLYQLNKINDALESYSKAGQFNP 534
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+ + + QGII L +K EA E F + N Y + +++
Sbjct: 535 QFSQAHYSQGIILQKLDRKSEA---LEAFTQATKANSNYYQAWLN 576
>gi|187251109|ref|YP_001875591.1| type II secretion system [rpteom [Elusimicrobium minutum Pei191]
gi|186971269|gb|ACC98254.1| Putatively involved in type II secretion system [Elusimicrobium
minutum Pei191]
Length = 563
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Query: 147 NDIEALQTLMEVR-----IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
+++ Q+L +VR + K +AV + + P E + L + ++G+ ++
Sbjct: 40 DNVMETQSLNDVRKGFYFMSVAKYEDAVTAFAKAVVKNPKEANYYLFLGRALYWSGKVDS 99
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A+ F + +P +AY L + Y G + + +K EKA E+ + D K
Sbjct: 100 AMAEFRTAMEINPKNGDAYQLLGIGY-GWKGDIRQAQKNFEKA------ERLMPNRPDVK 152
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
+ ++ + ++K AL V P+D Y G+I +L + AE+ F+ +L
Sbjct: 153 MNLSSVYASQNKLELALDYIRMAVALSPKDPLLYHQLGLISEMLGRDSSAEEAFKTSIKL 212
Query: 322 VPR 324
PR
Sbjct: 213 YPR 215
>gi|224809432|ref|NP_861448.2| transmembrane and TPR repeat-containing protein 3 [Homo sapiens]
gi|46798873|emb|CAG26973.1| SMILE protein [Homo sapiens]
gi|109658812|gb|AAI17178.1| Transmembrane and tetratricopeptide repeat containing 3 [Homo
sapiens]
gi|109658968|gb|AAI17176.1| Transmembrane and tetratricopeptide repeat containing 3 [Homo
sapiens]
gi|119617821|gb|EAW97415.1| transmembrane and tetratricopeptide repeat containing 3 [Homo
sapiens]
gi|313883880|gb|ADR83426.1| transmembrane and tetratricopeptide repeat containing 3 [synthetic
construct]
Length = 914
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|301617155|ref|XP_002938005.1| PREDICTED: intraflagellar transport protein 88 homolog [Xenopus
(Silurana) tropicalis]
Length = 826
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCYRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLV 224
++EI +K P VE LV
Sbjct: 678 YKEIHKKFPDNVECLRFLV 696
>gi|410098285|ref|ZP_11293263.1| hypothetical protein HMPREF1076_02441 [Parabacteroides goldsteinii
CL02T12C30]
gi|409222159|gb|EKN15104.1| hypothetical protein HMPREF1076_02441 [Parabacteroides goldsteinii
CL02T12C30]
Length = 273
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 11/229 (4%)
Query: 91 MRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIE 150
MRL I +A A + E E + D ++ VS EE + + NP +
Sbjct: 1 MRLLLIFITFIMATANCFAQSYEELIEKSYDFLDKKDLVSAEESLRAAMRLEPGNPMNYA 60
Query: 151 ALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEIL 210
L L ++ + KL +A+ + PN +A + S GE+E A+ ++ +L
Sbjct: 61 LLTNLGSIQRRQGKLQDALLSYTAALSGRPNNPTILENRASLYSELGETEKALNDYDALL 120
Query: 211 RKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIK 268
+P EA + GL+ K E+ +K +E +K + +L A ++
Sbjct: 121 IVEPTNEEALYCRGLIYI---QKKNYIWAEQDFDKILEMNEKSVRA------RLGHAILE 171
Query: 269 VMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
M + E+ R++ L+ + PRD+ Y + +Y ++ K A K
Sbjct: 172 KMRGNYEESERIFNYLISQMPRDWLLYEGRADVYFMMGKNARAMADINK 220
>gi|220907483|ref|YP_002482794.1| hypothetical protein Cyan7425_2070 [Cyanothece sp. PCC 7425]
gi|219864094|gb|ACL44433.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 264
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
EA+ R ++L P+ L ++ Q AGE EAAI + L++ P + + L MA
Sbjct: 80 EAIKAFQRSVKLNPDNLSGYQLLSEAQFQAGEQEAAIATLQTALKRKPNDIAMLNTLGMA 139
Query: 227 YDGSDKKLNEVEK 239
Y SD +L E E+
Sbjct: 140 YLSSD-RLTEAER 151
>gi|330506325|ref|YP_004382753.1| hypothetical protein MCON_0006 [Methanosaeta concilii GP6]
gi|328927133|gb|AEB66935.1| Tetratricopeptide repeat protein [Methanosaeta concilii GP6]
Length = 315
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 9/164 (5%)
Query: 166 VEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GL 223
+EA+D ++R IE++P + +KA G + A++ F E L DP R++A+
Sbjct: 89 IEALDSVNRSIEIDPVNADALYMKAGFYGETGRTRDALQAFNETLEVDPERIDAWFWKAD 148
Query: 224 VMAYDGS-DKKLNEVEKRIE---KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALR 279
+A GS ++ LN + IE ++M + KS + L Q K + +E
Sbjct: 149 FLASMGSYEEALNAYNRTIEIDPESMNAARSWDSKSYVLKKMGLEDQAKSAAAMAAE--- 205
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
Y++ +++ P D + +G + DEA + L P
Sbjct: 206 TYDKAIEQNPNDANAWFGKGCNLNDQGRYDEAAVALNRSVELAP 249
>gi|440680211|ref|YP_007155006.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428677330|gb|AFZ56096.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 560
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
++ Q + NPN +A Q R +S A++ ++ + + PN E + +Y
Sbjct: 323 EDFNQAIRINPNLAQAYQNRGFARCESGDFKGAIEDFNQALRINPNYAEAYYNRGLAHNY 382
Query: 196 AGESEAAIKGFEEILRKDPLRVEAY 220
+G+ +A I+ F + LR +P EAY
Sbjct: 383 SGDRQAEIEDFNQALRINPNLAEAY 407
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 105 PVAAAATVESTNESTK--DTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKS 162
P A A N +K D A ED + Q L+ NPN +EA + R++S
Sbjct: 129 PNFAEAYCNRGNARSKLGDMKGAMEDYN---------QALSINPNSVEAYLSRGFARLQS 179
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ ++ ++ I + PN E + + AG+ + AI+ + LR +P EAY
Sbjct: 180 GDMNGGMEDYNQAISINPNLAEAYCNRGNARCEAGDVQGAIEDCNQALRINPKLAEAY 237
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
++ Q L NPN +A + R +S A++ ++ I + PN + + +
Sbjct: 289 EDYNQGLRINPNLAQAYRNRGFARCESGDFKGAIEDFNQAIRINPNLAQAYQNRGFARCE 348
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE 238
+G+ + AI+ F + LR +P EAY+ +A++ S + E+E
Sbjct: 349 SGDFKGAIEDFNQALRINPNYAEAYYNRGLAHNYSGDRQAEIE 391
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
++ Q L NPN EA Q R KS A++ ++++ + PN E L + +
Sbjct: 425 EDYNQALHINPNLAEAYQNRGFARCKSGDFKGAIEDCNQVLRINPNFAEAYLNRGNARLE 484
Query: 196 AGESEAAIKGFEEILRKDPLRVEAY 220
+G+ + AI+ + LR +P AY
Sbjct: 485 SGDMKGAIEDCNQALRINPNLAIAY 509
>gi|357113001|ref|XP_003558293.1| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like [Brachypodium distachyon]
Length = 842
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 121 DTTSAREDVSYEEKE-KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELE 179
D SA V +++ +E ++ + P ++AL L + + + + V A ++ R++ +
Sbjct: 417 DLGSALHAVGDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIR 476
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
PN + QL KA GESE A K +E + RVE Y
Sbjct: 477 PNHWRAQLNKAVALLGQGESEDAKKALKEAFKMTQ-RVEVY 516
>gi|187925002|ref|YP_001896644.1| hypothetical protein Bphyt_3028 [Burkholderia phytofirmans PsJN]
gi|187716196|gb|ACD17420.1| TPR repeat-containing protein [Burkholderia phytofirmans PsJN]
Length = 620
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 7/201 (3%)
Query: 124 SAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF 183
+A D ++ E+ L NP ++AL L +R + + EA +++ R + L P +
Sbjct: 15 AAHRDGRLDDAERGYRATLDGNPAHVDALHLLGVLRHQQGQHAEAAELVRRAVNLRPEDA 74
Query: 184 EWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEK 243
QL G+ + AI+ F L P A++ L AY + + + + EK
Sbjct: 75 ALQLNLGNALKALGQIDDAIEQFRNALTLAPSFPMAHYNLGNAYAAAGRHEDAADA-FEK 133
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
++ R + + S +F + + +H+EA+ + ++ P G+
Sbjct: 134 SL-RLQPDDASSH-NNFGNALHAL----GRHTEAIAAFRRTIELRPGHAGALNNMGMSLN 187
Query: 304 LLRKKDEAEKQFEKFRRLVPR 324
L + +EA F+ PR
Sbjct: 188 ALGRAEEAIPCFQTALAAEPR 208
>gi|57999456|emb|CAI45938.1| hypothetical protein [Homo sapiens]
Length = 914
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|440782778|ref|ZP_20960698.1| hypothetical protein F502_11111 [Clostridium pasteurianum DSM 525]
gi|440219824|gb|ELP59034.1| hypothetical protein F502_11111 [Clostridium pasteurianum DSM 525]
Length = 314
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 163 QKLVEAVDVIDRLIELEPNE-FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
KL++++D+ +++ EL + + + A + G+S+ A ++E L D AY+
Sbjct: 21 NKLIKSLDLYNKVYELSSGKNLDAIINLALIYDSLGKSDKAKDYYKEALSIDDYEERAYY 80
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
GL YD + K E KA+ K +A + K A+ Y
Sbjct: 81 GLATIYD-EEGKYEEAIILYNKAIYINPNYHKAY------FFLANAYDVSGKKDLAIETY 133
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++L+ P DF L G IY + D A K F K ++ P NH
Sbjct: 134 KKLLSLNPMDFWANLNLGCIYEEQNQNDLAYKIFSKALKINPNNH 178
>gi|406892342|gb|EKD37719.1| Tetratricopeptide TPR_2 repeat protein, partial [uncultured
bacterium]
Length = 611
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ E+ +++ LA PNDI+ L L E++ KL EA D+ + +++ P LLKA
Sbjct: 136 YEKAEEYLKKALADLPNDIQLLTVLAELQFDIGKLQEAQDITEAILKTNPANAAASLLKA 195
Query: 191 QVQSYAGESEAAIKGFEEILRKDP 214
+ G+++ AI+ F + P
Sbjct: 196 RFLIKEGKNDGAIEIFTRLTADYP 219
>gi|224043184|ref|XP_002188826.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Taeniopygia guttata]
Length = 823
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A++ +R + P + +WQL+ A +G + A++
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEK 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI 241
++ I RK P VE LV +D L EV++ I
Sbjct: 678 YKVIHRKFPDNVECLRFLVRL--CTDMGLKEVQEYI 711
>gi|257093625|ref|YP_003167266.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046149|gb|ACV35337.1| PEP-CTERM system TPR-repeat lipoprotein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 925
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 15/197 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE EK++ + L NP ++ A Q L+ V +++Q+L A+ + ++ P E + A
Sbjct: 318 YELAEKDLSKVLMRNPGNLPAQQALIGVLLRTQRLERALALAQEMVARAPEEPRALSVAA 377
Query: 191 QVQSYAGESEAAIKGFEE---ILRKDPLRVEAYHGLVMA-YDGSDKKLNEVEKRIEKAME 246
V AG+++ A FE+ + K P +A GL +A G D + I ME
Sbjct: 378 MVYLKAGDAKKAQSLFEQANALGGKTP---KALTGLALARLAGGDAG-----QAINVLME 429
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
+ + +L+ V + +AL V + ++ P D R +G +
Sbjct: 430 ASAVDAAGV---EADVLLVNHFVGSKQFDKALEVLAIMARKRPGDARILTLEGEVLIAAG 486
Query: 307 KKDEAEKQFEKFRRLVP 323
++ EA FE+ L P
Sbjct: 487 RRAEARVAFERAYELRP 503
>gi|406982865|gb|EKE04132.1| hypothetical protein ACD_20C00104G0026 [uncultured bacterium]
Length = 356
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE K + L+ + +++AL + K+ EA+D + IEL P + A
Sbjct: 43 EESLKTYRELLSIDSVNVQALVNIGSTLFLMGKVDEAIDNYKKAIELNPESVSAYMNLAN 102
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ G+ + AI+G+++ + P ++AY L +A+ ++ ++AME +
Sbjct: 103 TYAEIGKYDEAIEGYKKSIEISPDNIDAYSSLGLAFQDL--------RKYDEAMENYRS- 153
Query: 252 KKKSDLRDFK--LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
K D +++ + +A + + +++ +A+ Y++ V D++ +C + L+K +
Sbjct: 154 ALKLDPENYEHYVNVASVYMQKTQFEDAIEFYKKAVNFNNNDYKSLICIANALSELKKYN 213
Query: 310 EAEKQFEKFRR 320
K FE +++
Sbjct: 214 ---KSFEYYQK 221
>gi|296134823|ref|YP_003642065.1| Tetratricopeptide TPR_4 [Thiomonas intermedia K12]
gi|295794945|gb|ADG29735.1| Tetratricopeptide TPR_4 [Thiomonas intermedia K12]
Length = 733
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 108 AAATVESTNESTKDTTSAR--------EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVR 159
AAA S + D T A+ + Y E E+ + Q +AA P +L +
Sbjct: 51 AAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVRQAIAAQPAQGAYWNSLGRLL 110
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
+ ++ EAV + ++L P E A+ Q AGE A+K +E+ LR P +A
Sbjct: 111 LLQGRMPEAVQALQEALQLSPQNAESFFNLAEAQGLAGELAEAVKNYEQALRLQPGHAQA 170
Query: 220 YHGL 223
GL
Sbjct: 171 RFGL 174
>gi|406981151|gb|EKE02662.1| TPR Domain containing protein [uncultured bacterium]
Length = 627
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 9/173 (5%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P +A L + + ++ ++ ++R++EL P+ ++ +A AG+ E A
Sbjct: 304 PGYSDAYYNLALIYKRKNDPLQEMECLNRVLELTPSNYQAFYSRAIAYYAAGDFEKAKSD 363
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR-DFKLLI 264
F +L AY L Y NE+ ++A+E K +D D L +
Sbjct: 364 FYRVLELKRDHYAAYRNLATIY------ANELNP--DQAIEYYHKALMYNDGDVDSYLNL 415
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
A I ++ K +EA+ Y + V P D+R +L G Y + A + F+K
Sbjct: 416 ASIYLVTGKSNEAIECYFKAVNANPNDYRIFLNLGKAYLASSNVENALESFKK 468
>gi|351730791|ref|ZP_08948482.1| tetratricopeptide tpr_1 repeat-containing protein [Acidovorax
radicis N35]
Length = 809
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 7/192 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE K EQ A + +D++A Q + + + + EA+ DR+I L P E K
Sbjct: 172 EEALKCYEQAFALDSDDVDACQNMGMLHADAGRQDEALKCFDRVIALRPQHAEAHNGKGA 231
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ + + AI FE ++ + V+A+ L +A S +L+ +KA + ++
Sbjct: 232 ILAQREQWTQAIAHFEAAIQGNEKLVQAHKNLGLA-QRSLFQLSNAVTAFQKAAQLSPQD 290
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ LL A +++EAL Y++ ++ P Y + ++ + ++A
Sbjct: 291 VEILSFLALSLLEA------GRYAEALAAYDQAIRLAPERPDLYYNRANLHIRFNRHEDA 344
Query: 312 EKQFEKFRRLVP 323
+ RL P
Sbjct: 345 VADYMAVYRLKP 356
>gi|113476308|ref|YP_722369.1| glycosyl transferase family protein [Trichodesmium erythraeum
IMS101]
gi|110167356|gb|ABG51896.1| glycosyl transferase, family 2 [Trichodesmium erythraeum IMS101]
Length = 1486
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 151 ALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ--LLKAQVQSYAGESEAAIKGFEE 208
A + L ++ + K EA + + + I LEP + Q L S G+ E AI +++
Sbjct: 381 AYRNLAKIYTQVNKSQEAAEYLYQAIRLEPGKATAQDFLFTGNTLSENGKLEQAIACYQQ 440
Query: 209 ILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK-KSDLRDFKLLIAQI 267
++ DP EAY L D L + ++E +++ K +K K + K I +I
Sbjct: 441 LISADPNSFEAYEKL------GDSLLKQ--GQLELSLQNYKNAQKLKPYSTEIKQKIGEI 492
Query: 268 KVMESKH-------SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
++ EA++ Y + ++ P+ PY G +++ K +EA K +EK +
Sbjct: 493 YYRYGEYFQKKEKVEEAVKAYRQAIENYPQYDIPYGKLGEVFSQQEKWEEAVKVYEKASQ 552
Query: 321 LVPRNHPY 328
+ P N Y
Sbjct: 553 IKPDNSWY 560
>gi|452209187|ref|YP_007489301.1| TPR-domain containing protein [Methanosarcina mazei Tuc01]
gi|452099089|gb|AGF96029.1| TPR-domain containing protein [Methanosarcina mazei Tuc01]
Length = 1024
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 16/169 (9%)
Query: 160 IKSQKLVE-AVDVIDRLIELEPNE-FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
I S+K E A++ D L+E+ P + WQ + + Y + A++ FE+ L DP +
Sbjct: 23 IGSEKNFEKALEAFDALLEITPKDTVAWQY-RGNILRYLDRPDEALEAFEKALAFDPENI 81
Query: 218 EA--YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD-LRDFKLLIAQIKVMESKH 274
A + GL + Y LN EK +E +++ + + L L + Q+ +H
Sbjct: 82 PARYFKGLTLGY------LNLPEKALEAFRGVIERDPENAGALYYSGLALNQL----WRH 131
Query: 275 SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+EA+ E +K P + + +G+ +LRK EA + FEK L P
Sbjct: 132 TEAVSALSEALKINPDNPGAWYYRGVSLYILRKCMEALEAFEKTLALEP 180
>gi|428310966|ref|YP_007121943.1| hypothetical protein Mic7113_2753 [Microcoleus sp. PCC 7113]
gi|428252578|gb|AFZ18537.1| tetratricopeptide repeat protein [Microcoleus sp. PCC 7113]
Length = 274
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 89/224 (39%), Gaps = 15/224 (6%)
Query: 98 IKPAIAAPVAAA----ATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQ 153
I P +A + A+ V+ NE + +A + E Q + P++
Sbjct: 23 ISPVMAQEIQASDLTEVQVQQFNELRQQAFAATNRGDFPTAEGYWTQLIELLPDNPVGWS 82
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD 213
R+ KL EA+ ++ IEL PN + L + GE E AI ++ +L D
Sbjct: 83 NRGNSRVSQNKLKEAIADFNQSIELAPNAPDPYLNRGTAYEGLGEWEDAIADYQRVLEID 142
Query: 214 PLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK 273
PL AY+ L A G K +E EKA E ++ L + Q +
Sbjct: 143 PLDAMAYNNLGNAKAGQ-GKWDEAIAGYEKAAELAPNFAFAR--ANYALALYQT----GQ 195
Query: 274 HSEALRVYEELVKEEPR--DFRPYLCQGIIYTLLRKKDEAEKQF 315
EALR ++++ P+ D R L + K+ EAE +
Sbjct: 196 KEEALRTLRNIIRKYPQFPDVRAALTAALWED--GKRGEAESNW 237
>gi|4997|emb|CAA30532.1| protein p67 [Schizosaccharomyces pombe]
Length = 665
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 29/202 (14%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL-LKAQVQSYAGESE 200
L NP E+ L ++ +A+ I+R I+L+P FE+ L+ S E E
Sbjct: 424 LETNPYSPESWCILANWFSLQREHSQALKCINRAIQLDPT-FEYAYTLQGHEHSANEEYE 482
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAY------DGSD---KKLNEVEKR-------IEKA 244
+ F + +R + A++GL M Y D +D ++ E+ I
Sbjct: 483 KSKTSFRKAIRVNVRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMI 542
Query: 245 MERCKKEKKKSDLRDFKLLI-----------AQIKVMESKHSEALRVYEELVKEEPRDFR 293
ERCK KK D D + A++ ++ H +AL E+L P +
Sbjct: 543 YERCKDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAIAPDEAN 602
Query: 294 PYLCQGIIYTLLRKKDEAEKQF 315
+ G I+ +RKK+ A K F
Sbjct: 603 VHFLLGKIFKQMRKKNLALKHF 624
>gi|110637714|ref|YP_677921.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
gi|110280395|gb|ABG58581.1| TPR repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
Length = 515
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 81/201 (40%), Gaps = 19/201 (9%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE + + +A P++ +A + + + K VEA+ ++ I L PN +
Sbjct: 283 YEESITDYSKVIALQPDNFQAYFGRGQSKAEFGKHVEAIADYNKAIVLYPNFTYAYFYRG 342
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA------YDGSDKKLNEVEKRIEKA 244
+SY AIK F + ++ DP AY Y+G+ K N
Sbjct: 343 FSKSYLDNFSDAIKDFNKAIQLDPNDHPAYFNRAYCKREEGDYEGAIKDYN--------- 393
Query: 245 MERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTL 304
+C K + + F+ A M + A++ Y+E+VK+ P + Y +G
Sbjct: 394 --KCISLKPQYEEAYFQK--ANTLYMMGDKTAAIKEYDEIVKKFPNESAAYANRGFFNMN 449
Query: 305 LRKKDEAEKQFEKFRRLVPRN 325
++K EA F K L N
Sbjct: 450 IKKDKEAMDDFNKAITLNENN 470
>gi|398345021|ref|ZP_10529724.1| hypothetical protein LinasL1_18642 [Leptospira inadai serovar Lyme
str. 10]
Length = 374
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 44/231 (19%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+++E E Q L NP D + L + Q+ +A+ ++L+ ++P+
Sbjct: 139 NFKESEVYYMQALQINPKDQYVIVGLGHLFFACQRYKDAIHWWEKLLVIQPDNI------ 192
Query: 190 AQVQSYAGESEAAIKGFEEILRK-------DPLRVEAYHGLVMAYDGSD--KKLNEVEKR 240
++ + G S IK F+E ++ DP A +GL +Y G +K NE +R
Sbjct: 193 -KILTEIGNSYRKIKDFDEAIQYYRRAADLDPRNFFALYGLAESYRGKKDFRKANEFWER 251
Query: 241 I------------------------EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHS- 275
I +KA+E C + S+ D+ L+ + ++ K S
Sbjct: 252 ILEFDPDNKLIINRYADSLRGMGEYDKALE-CFN-RILSEGEDYFALLGKASSLKLKGSR 309
Query: 276 -EALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+A +Y +L K+ P D RP + +Y + KKD+A K E+F R P N
Sbjct: 310 DKAEEIYLDLHKKFPMDPRPVIELSELYYDVSKKDDAVKILEEFHRKQPLN 360
>gi|297692556|ref|XP_002823611.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Pongo
abelii]
Length = 914
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGL-VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L ++A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|376007446|ref|ZP_09784641.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|375324082|emb|CCE20394.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
Length = 1103
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 24/209 (11%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN--EFEWQLLKAQVQSYAG 197
Q L +P+ E L + +++ ++ EA+ + IE++P+ W L +V G
Sbjct: 357 QALEIHPDFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKPDLAAVHWNL--GRVYQQLG 414
Query: 198 ESEAAIKGFEEILRKDPLRVEA-YH---GLVMAYDGSDKKLNEVEKRI---EKAMERCKK 250
+EAAI ++ L P VEA +H G ++A G E E I ++A+ R
Sbjct: 415 NTEAAINSWKIALELKPDLVEADFHFELGNILARRG------EYEPAIASYQRAISR--- 465
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
K + + I ++V + + EAL ++ + P+ YL I+T LR+ +
Sbjct: 466 ---KPNWAEPYANIGCLRVQQDRLQEALDQLQKAISLNPQMPELYLHTARIFTKLRRHQD 522
Query: 311 AEKQFEKFRRLVPRNHPYREYFVDNMVAT 339
A ++K L P N P + NM AT
Sbjct: 523 AINHYQKVIELKP-NFPDAYANLANMQAT 550
>gi|298252040|ref|ZP_06975843.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297546632|gb|EFH80500.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 1170
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 17/199 (8%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE EQ L +P D + + ++ EA+ V ++ I+L+P + +
Sbjct: 420 EEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALVVFEQSIQLDPEPVDAYAQRGD 479
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAY---HGLVMAYDGSDKKLNEVEKRIEKAMERC 248
+ S G A+ +E++L +DP R E Y L+ D + E +E+A+ C
Sbjct: 480 ILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLD----RFEEAADALEQAL--C 533
Query: 249 KKEKKKSDLRDFKLLIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
D ++ +AQ ++ + EA+ E+ + +P++ Y QG + L+
Sbjct: 534 ------LDPGLTQVYLAQAGPLQRLGRLEEAVAALEQAIHLDPKNADAYFSQGGMLITLK 587
Query: 307 KKDEAEKQFEKFRRLVPRN 325
+ EA E++ RL P +
Sbjct: 588 RYGEALNAIEQYMRLRPDD 606
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 13/208 (6%)
Query: 119 TKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL 178
T S E YEE E+ + +PN V + + EAV + I L
Sbjct: 339 TNRANSLNELGKYEEALATYEEVIRLDPNGARIYSNKGSVLFQLGRYEEAVAAFEEHIRL 398
Query: 179 EPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH---GLVMAYDGSDKKLN 235
+P E K + E A+ FE+ L DP Y+ ++MA ++ L
Sbjct: 399 DPESPEAYFNKGKTLIALDRPEEALAMFEQALWLDPYDARKYYHKGNMLMALKRYEEALV 458
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
E+ I+ E ++ D +++++ +++EAL +YE+++ +P Y
Sbjct: 459 VFEQSIQLDPEPVDAYAQRGD------ILSEL----GRYAEALAMYEQVLARDPNRAEMY 508
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ QG + +L + +EA E+ L P
Sbjct: 509 VKQGSLLYMLDRFEEAADALEQALCLDP 536
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE EQ + +P ++A ++ + + EA+ + ++++ +PN E + +
Sbjct: 453 YEEALVVFEQSIQLDPEPVDAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQG 512
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ E A E+ L DP + Y +A G ++L +E+ + +
Sbjct: 513 SLLYMLDRFEEAADALEQALCLDPGLTQVY----LAQAGPLQRLGRLEEAVAALEQAIHL 568
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ K +D + + + ++ EAL E+ ++ P D Y+ +G + L + +E
Sbjct: 569 DPKNADAYFSQ---GGMLITLKRYGEALNAIEQYMRLRPDDAFAYVARGEVLVSLNRPEE 625
Query: 311 AEKQFEKFRRLVPRN 325
A + E+ RL P +
Sbjct: 626 ALEAVEQAIRLNPND 640
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 18/205 (8%)
Query: 121 DTTSAREDV-----SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRL 175
D + R D+ Y E EQ LA +PN E + + EA D +++
Sbjct: 472 DAYAQRGDILSELGRYAEALAMYEQVLARDPNRAEMYVKQGSLLYMLDRFEEAADALEQA 531
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY---HGLVMAYDGSDK 232
+ L+P + L +A G E A+ E+ + DP +AY G+++ +
Sbjct: 532 LCLDPGLTQVYLAQAGPLQRLGRLEEAVAALEQAIHLDPKNADAYFSQGGMLITLKRYGE 591
Query: 233 KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF 292
LN +E+ + R + + + + ++L++ ++ EAL E+ ++ P D
Sbjct: 592 ALNAIEQYM-----RLRPDDAFAYVARGEVLVSL-----NRPEEALEAVEQAIRLNPNDS 641
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEK 317
R Y + I +L EA + E+
Sbjct: 642 RAYALKKKIELVLSPGKEAPAELEQ 666
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE +EQ L +P++I + ++ + EA+ V ++ + L P+ +L +
Sbjct: 859 YEEALVAVEQALRLDPDNIASHLAQGQILYSLEHYEEALVVAEQTLHLNPDTIALRLDQG 918
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAY---HGLVMAYDGSDKK--------LNEVEK 239
Q G E A+ E+ LR DP + A G+ A + +++E
Sbjct: 919 QFLYTLGRYEEALAAVEQALRLDPEDIRALLLEEGIQSARSSGTQPERRRGIPLASQIEM 978
Query: 240 RIEKAMERCKK--EKKKSDLRDFKLLIAQIKVM--ESKHSEALRVYEELVKEEPRDFRPY 295
+K +E K+ E D + L+A+ K + +++EAL V E+ + +P Y
Sbjct: 979 VPDKVLEALKRQEEAMHPDPDRIEKLVARGKDLFKRKQYNEALEVIEQAIGLDPNHAEAY 1038
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREY 331
+ + L K A + E+ RL P Y Y
Sbjct: 1039 EVKSRVLVGLSLKKAALEVLEQAIRLNPYYSDYSSY 1074
>gi|440753799|ref|ZP_20933001.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
gi|440174005|gb|ELP53374.1| kinase domain protein [Microcystis aeruginosa TAIHU98]
Length = 717
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +D+L+ + N+ + K
Sbjct: 428 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGW 487
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G+ +LN++ +E + +
Sbjct: 488 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQF 542
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q ++SEAL + + K ++ +L QG + L + E
Sbjct: 543 NPQFSQAHYSQGIILQ---KLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQE 599
Query: 311 AEKQFEKFRRLVPR 324
A +EK RR+ R
Sbjct: 600 AIASYEKARRISSR 613
>gi|384248627|gb|EIE22110.1| hypothetical protein COCSUDRAFT_42503 [Coccomyxa subellipsoidea
C-169]
Length = 408
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 41/220 (18%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLLKAQVQSY 195
E+E L+ D L+ ++ +++L +P++ WQ L +V+S
Sbjct: 204 ELEAQLSGGTADSSTLRRAAGAYAALGDSAKSGAALEKLTGQDPSDLAAWQAL-GEVRSG 262
Query: 196 AGESEAA------------------IKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV 237
AG+ + A ++G E L D + EA AY +KL E
Sbjct: 263 AGDFKGAVAAYKRAAAEAPEPDLTLMQGLAEALVADGRQQEA-----AAYLLEQRKLAES 317
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKH-SEALRVYEELVKEEPRDFRPYL 296
K + D + LL+ ++ +H +EA+ VY+ ++ + P DFR YL
Sbjct: 318 GKGL--------------DAVNLDLLLGRVYTEWDRHDAEAMEVYDRIIDKNPSDFRGYL 363
Query: 297 CQGIIYTLLRKKDEAEKQFEKFR-RLVPRNHPYREYFVDN 335
+G++ +K + ++ F + R P P + + N
Sbjct: 364 AKGVLLRREGRKGDMQRAFLQARYNASPEAMPVLDRVIGN 403
>gi|354565365|ref|ZP_08984540.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
gi|353549324|gb|EHC18766.1| Tetratricopeptide TPR_1 repeat-containing protein [Fischerella sp.
JSC-11]
Length = 373
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Query: 104 APVAAAATVESTNESTKDTTSAREDVS--YEEKEKEIEQHLAANPNDIEALQTLMEVRIK 161
A AA T++ +E + A V+ Y++ KE ++ L NPN I L ++
Sbjct: 12 AYAYAANTLDKCSEKIYSSCKAGMLVTNNYKKALKEFDRTLKINPNHISTLARRGQIYQF 71
Query: 162 SQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
+ +A+ DR+IEL+PN E ++ + + E A+K F + +P
Sbjct: 72 LLRYEDALKDFDRVIELDPNFTEALAIRGETYRLMQKYEEALKDFNRAIALNP-----NF 126
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI-AQIKVMESKHSEALRV 280
+A G +L +R E+A++ + K + D+ L Q + + +AL+
Sbjct: 127 DWALASRGQTYQL---MQRYEEALKDFNRAIKINSNLDWVLASRGQTYQLMQCYKQALKD 183
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
++ +K P + +G Y L+++ +A K F+
Sbjct: 184 FDRAIKLNPGNAWALAGRGETYRLMQRYKQALKDFD 219
>gi|377574403|ref|ZP_09803433.1| hypothetical protein MOPEL_074_00850 [Mobilicoccus pelagius NBRC
104925]
gi|377536959|dbj|GAB48598.1| hypothetical protein MOPEL_074_00850 [Mobilicoccus pelagius NBRC
104925]
Length = 301
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+ K + + +AA P + A++ L ++ +A + R++EL P++ + +L
Sbjct: 144 QAKVDRLTKKIAAEPKNTAAMKELANEYSRAGHYRKAAETQTRIVELNPDDVDARLALGV 203
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAME 246
+ AA K + E+LR+DP AY+ L Y ++ KL++ E +K +E
Sbjct: 204 AHFNMDDLPAAEKHWNEVLRRDPDNANAYYDLGFLYFATNPPKLDKAEAAWKKLVE 259
>gi|410692351|ref|YP_003622972.1| putative UDP-N-ACETYLGLUCOSAMINE--PEPTIDE
N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT [Thiomonas sp.
3As]
gi|294338775|emb|CAZ87109.1| putative UDP-N-ACETYLGLUCOSAMINE--PEPTIDE
N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT [Thiomonas sp.
3As]
Length = 753
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 108 AAATVESTNESTKDTTSAR--------EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVR 159
AAA S + D T A+ + Y E E+ + Q +AA P +L +
Sbjct: 71 AAALYRSALQLQPDLTDAQHLLGVALGQSGEYAEAERLVRQAIAAQPAQGAYWNSLGRLL 130
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
+ ++ EAV + ++L P E A+ Q AGE A+K +E+ LR P +A
Sbjct: 131 LLQGRMPEAVQALQEALQLSPQNAESFFNLAEAQGLAGELAEAVKNYEQALRLQPGHAQA 190
Query: 220 YHGL 223
GL
Sbjct: 191 RFGL 194
>gi|241723185|ref|XP_002413701.1| tetratricopeptide repeat protein 10, tpr10, putative [Ixodes
scapularis]
gi|215507517|gb|EEC17009.1| tetratricopeptide repeat protein 10, tpr10, putative [Ixodes
scapularis]
Length = 303
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 134 KEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQ 193
+++E Q P++IE ++ L I+SQ +A+ ++ ++P + +WQL+ A
Sbjct: 154 RKREFNQSYRYFPSNIEIIEWLGAYYIESQLFEKAIKYFEKAAIIQPAQVKWQLMVASCH 213
Query: 194 SYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE 236
+G + A++ ++ + RK P +E LV +D +NE
Sbjct: 214 RKSGNYQNALQTYKTVHRKFPDNIECLRFLVRL--TTDLGMNE 254
>gi|341614821|ref|ZP_08701690.1| hypothetical protein CJLT1_07688 [Citromicrobium sp. JLT1363]
Length = 376
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 79 TSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTS-AREDVSYEEKEKE 137
T +T+ A L +++P + P++ T E+ +T AR + + +
Sbjct: 3 TLITLGCIASLAIQVPAIAQAPSV------------TRETQLETAERARAAGDFAQARET 50
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E LA NP+D + L+ L V L A IDR + L P++ + QL + + + G
Sbjct: 51 LESLLAQNPDDPDLLRRLAAVSAAQGDLERAQAQIDRALALAPDDLDIQLARGNILFWRG 110
Query: 198 ESEAA 202
E +AA
Sbjct: 111 ERDAA 115
>gi|413956242|gb|AFW88891.1| hypothetical protein ZEAMMB73_647797 [Zea mays]
gi|413956243|gb|AFW88892.1| hypothetical protein ZEAMMB73_647797 [Zea mays]
gi|413956244|gb|AFW88893.1| hypothetical protein ZEAMMB73_647797 [Zea mays]
Length = 843
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 25/163 (15%)
Query: 62 PSLLRTLTPLSSPLIKITSVTVAAAAL---LFMRLPFHSIKPAIAAPVAAAATVESTNES 118
PS R L L S L + A AL +F++ E ++
Sbjct: 376 PSHARALKLLGSALFGVGEYRAAEKALEEAIFLK--------------------EDYADA 415
Query: 119 TKDTTSAREDVSYEEKE-KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
D SA V +++ +E + + P ++AL L + + + + V A ++ R++
Sbjct: 416 HCDLGSALHAVGEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLS 475
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ PN + QL KA GESE A K +E K RVE Y
Sbjct: 476 IRPNHWRAQLNKAVALLGQGESEEAKKALKEAF-KMTQRVEVY 517
>gi|404496889|ref|YP_006720995.1| lipoprotein [Geobacter metallireducens GS-15]
gi|418066276|ref|ZP_12703641.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter metallireducens
RCH3]
gi|78194494|gb|ABB32261.1| TPR domain lipoprotein [Geobacter metallireducens GS-15]
gi|373560717|gb|EHP86971.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter metallireducens
RCH3]
Length = 883
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 51/92 (55%)
Query: 123 TSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE 182
TS + ++E EK +++ L A P A+ L +V + +++ E + +++ ++ +P
Sbjct: 134 TSYGQKKMFDEAEKYLKESLQAEPARASAMLQLAKVYLATKREQEGMGLLNEIVRKDPKN 193
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
+ L A + Y G SE A++ +++I++ DP
Sbjct: 194 TKAYYLAAFYEGYRGNSEKALEYYQKIMQADP 225
>gi|218197646|gb|EEC80073.1| hypothetical protein OsI_21792 [Oryza sativa Indica Group]
Length = 805
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E + + NP D + I L E ++ D+ I L+P + L KA
Sbjct: 170 YQEAAMHYTEAMKKNPKDPRVFSNRAQCHIYLGALPEGLEDADKCIALDPTFLKGYLRKA 229
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL------VMAYDGSDKK---LNEVEKRI 241
+VQ G E A+ + E L+ DP +E GL + +G D + L E+ +
Sbjct: 230 KVQLLMGNYEIALATYVEGLKCDPNNLEVLDGLRRCAACIKRANGGDSRAEDLREILGDL 289
Query: 242 EKAMERCKKEKKKSD 256
+ C K +K D
Sbjct: 290 HLNDDLCNKLQKSMD 304
>gi|148656866|ref|YP_001277071.1| hypothetical protein RoseRS_2749 [Roseiflexus sp. RS-1]
gi|148568976|gb|ABQ91121.1| Tetratricopeptide TPR_2 repeat protein [Roseiflexus sp. RS-1]
Length = 615
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 12/170 (7%)
Query: 165 LVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV 224
L +A + I +P+ FE +AQV ++AI F + L DP VEAYH
Sbjct: 343 LGQAAERYTEAIRADPSSFEAYFGRAQVNFNLSLFQSAIDDFTKALALDPDNVEAYHQRA 402
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK-HSEALRVYEE 283
A+ +LN+ + I E +++ D L+ + +++ + EAL +++
Sbjct: 403 RAF----YRLNQYDAAIRDFTEALERDPNN----DVILMRRGVAYRDNRQYDEALADFDQ 454
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFV 333
++ P Y + +++ K D A F++ + P YR FV
Sbjct: 455 SLQLNPDVSFTYYHRALLFQATGKLDRARADFDRALTIAPE---YRLAFV 501
>gi|209524929|ref|ZP_03273474.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
gi|209494578|gb|EDZ94888.1| serine/threonine protein kinase with TPR repeats [Arthrospira
maxima CS-328]
Length = 790
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN 235
+EL+P+ + K + GE + A+ E+ + DP A+HG +A G ++ +
Sbjct: 441 LELDPDNSDVLTSKGTLLYQTGEPQKALDAHEQAIAIDPNNARAWHGKGIALIGL-QRYD 499
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIA-QIKVMESK--HSEALRVYEELVKEEPRDF 292
E E+A + + S + L + Q K+ E+ +SEAL Y+++++E+PR
Sbjct: 500 EAVSAFEQA--KTIRPSAPSVWQSKALALEYQGKMAEAAQVYSEALATYDDILREQPRRA 557
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
++ +G + + L + ++A + ++K + P++
Sbjct: 558 EIWVERGSVLSKLGRHEQALESYQKALEINPQH 590
>gi|293372856|ref|ZP_06619230.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
gi|292632145|gb|EFF50749.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CMC 3f]
Length = 571
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IE+ P + +Q A V G E AI+ ILR DP
Sbjct: 468 QAALKARQFQRALDDIAKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILNNILRTDPKY 527
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 528 GEAY-----------RLLGLCQIQLKKTDEACGNFKKAKELGD 559
>gi|254410536|ref|ZP_05024315.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182742|gb|EDX77727.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 1491
Score = 42.4 bits (98), Expect = 0.37, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE +Q ++ P+ A K + EA+ D++I L+P+++ +
Sbjct: 430 YEEALANFDQVISLQPDYYPAWDNRGAALFKLGRNEEALASFDQVISLQPDDYHAWFKRG 489
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERC 248
G +E A+ F++++ P A+ G+V+ G ++ E ++A+
Sbjct: 490 VALGELGRNEEALASFDQVISLQPDYYPAWDNRGVVLFELGRNE---EALANFDQAISLQ 546
Query: 249 KKEKKKSDLRD---FKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
+ R FKL +H EAL +++ + +P D+ + +G+ L
Sbjct: 547 PDYSSAWNNRGAALFKL---------GRHEEALTNFDQAISLQPDDYHAWFKRGVALFKL 597
Query: 306 RKKDEAEKQFEKFRRLVPRNH 326
+ +EA F++ L P ++
Sbjct: 598 GRHEEALTNFDQVISLQPDDY 618
Score = 41.2 bits (95), Expect = 0.76, Method: Composition-based stats.
Identities = 45/228 (19%), Positives = 91/228 (39%), Gaps = 13/228 (5%)
Query: 103 AAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKS 162
+ PV+ ++TV + E YEE + +Q ++ P+ V IK
Sbjct: 164 SVPVSNSSTVSGAEFWFNQGVTLYELGRYEEALAKFDQAISLQPDYYHPWDNRGGVLIKL 223
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
+ EA+ DR I L+P+ ++ + V G + A+ ++ + P + +
Sbjct: 224 GRHKEALASFDRAISLQPDYYQAWRGRGVVLGMLGRHKEALANLDQAISLQPDFYKTWDN 283
Query: 223 LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD---FKLLIAQIKVMESKHSEALR 279
A G + E ++A+ + + R FKL ++ EAL
Sbjct: 284 RGAAL-GELGRYEEALANFDQAISLQPDDSSAWNNRGVVLFKL---------GRNEEALA 333
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP 327
+++++ +P D+ + G+ L + +EA F++ L P +P
Sbjct: 334 SFDQVISLQPDDYHAWFKLGVALGELGRNEEALASFDQVISLQPDYYP 381
Score = 38.1 bits (87), Expect = 7.2, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
+EE +Q ++ P+D A V + + EA+ D+ I L+P+ ++ +
Sbjct: 634 HEEALTNFDQVISLQPDDSSAWDNRGVVLGELGRHEEALANFDQAISLQPDYYQTWDNRG 693
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERC 248
G E A+ F++++ P +A+ G+V+ G K E ++ +
Sbjct: 694 AALFKLGRYEEALANFDQVISLQPDYYQAWDNRGVVLGELGRHK---EALANFDQVISL- 749
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ S + +L+ ++ ++ EAL Y++++ +P D + +G++ L +
Sbjct: 750 -QPDDSSAWFNRGVLLGEL----GRYEEALTSYDQVISLQPDDSSAWFNRGVLLGELGRH 804
Query: 309 DEAEKQFEKFRRLVPRNHP 327
EA +++ L P +P
Sbjct: 805 KEALTSYDQVISLQPDYYP 823
>gi|116073416|ref|ZP_01470678.1| hypothetical protein RS9916_33237 [Synechococcus sp. RS9916]
gi|116068721|gb|EAU74473.1| hypothetical protein RS9916_33237 [Synechococcus sp. RS9916]
Length = 286
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 72/154 (46%), Gaps = 5/154 (3%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
E++ +++ + +P + W+LL +Q++ G S A +++ R P + L +
Sbjct: 91 ESIVLVEDQLAAQPKAWRWRLLLSQLELRNGNSRGAEVHLQQLSRLHPTNPDVLQALALL 150
Query: 227 YDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
+ + ++ A++ + K+ S LL+A ++ + A+ Y++L+K
Sbjct: 151 RLQQGRPQLAINT-VQTALKTTEPSKRVS----LGLLLADLQRQSGSGTAAVTTYQQLIK 205
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+ P D RP + + ++ ++D+A E R+
Sbjct: 206 DSPDDARPLMAKALLMQEQGQRDQALALLESARQ 239
>gi|355564558|gb|EHH21058.1| Protein SMILE [Macaca mulatta]
Length = 881
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A + +GE + A
Sbjct: 562 NNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEAR 621
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 622 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEVWMKKAI------KLQADFRSALF 673
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + SK +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 674 NLALLYSQTSKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 732
Query: 321 LVPRN 325
+ P N
Sbjct: 733 MDPSN 737
>gi|115466588|ref|NP_001056893.1| Os06g0163000 [Oryza sativa Japonica Group]
gi|55296082|dbj|BAD67644.1| putative stress-induced protein sti1 [Oryza sativa Japonica Group]
gi|113594933|dbj|BAF18807.1| Os06g0163000 [Oryza sativa Japonica Group]
gi|215697343|dbj|BAG91337.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635012|gb|EEE65144.1| hypothetical protein OsJ_20227 [Oryza sativa Japonica Group]
Length = 805
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E + + NP D + I L E ++ D+ I L+P + L KA
Sbjct: 170 YQEAAMHYTEAMKKNPKDPRVFSNRAQCHIYLGALPEGLEDADKCIALDPTFLKGYLRKA 229
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL------VMAYDGSDKK---LNEVEKRI 241
+VQ G E A+ + E L+ DP +E GL + +G D + L E+ +
Sbjct: 230 KVQLLMGNYEIALATYVEGLKCDPNNLEVLDGLRRCAACIKRANGGDSRAEDLREILGDL 289
Query: 242 EKAMERCKKEKKKSD 256
+ C K +K D
Sbjct: 290 HLNDDLCNKLQKSMD 304
>gi|145515090|ref|XP_001443450.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410828|emb|CAK76053.1| unnamed protein product [Paramecium tetraurelia]
Length = 386
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 87/199 (43%), Gaps = 12/199 (6%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E+ K+ + L+ NPND A L + + +A++ ++IE++P E + +A
Sbjct: 183 EDAVKDYDTVLSLNPNDANAYNNLAIILNTLGRDEDAINSYQKIIEIKPQEQDAYSNQAI 242
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
+ G ++ AI + +++ +P Y G ++ + L + K IE
Sbjct: 243 LLKKLGRNDEAINCYNKLIDLNPNNANPYFRRGFLLMEKNKIQSLQDFTKSIELNPSNKD 302
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
K+ LL+ ++ + AL Y+++++ +P + Y Q II L +K+
Sbjct: 303 AHYNKA------LLLTEL----GQEENALLSYQQVIQLDPENKNAYFNQAIILRKLGRKE 352
Query: 310 EAEKQFEKFRRLVPRNHPY 328
EA + K ++ P Y
Sbjct: 353 EALNSYNKMLQIHPNVEAY 371
>gi|332221054|ref|XP_003259672.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Nomascus leucogenys]
Length = 914
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALRNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|242041483|ref|XP_002468136.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor]
gi|241921990|gb|EER95134.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor]
Length = 843
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 25/166 (15%)
Query: 62 PSLLRTLTPLSSPLIKITSVTVAAAAL---LFMRLPFHSIKPAIAAPVAAAATVESTNES 118
PS R L L S L + A AL +F++ E ++
Sbjct: 376 PSHARALKLLGSALFGVGEYRAAEKALEEAIFLK--------------------EDYADA 415
Query: 119 TKDTTSAREDVSYEEKE-KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
D SA V +++ +E + + P ++AL L + + + + V A ++ R++
Sbjct: 416 HCDLGSALHAVGEDDRAIQEFQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLS 475
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
+ PN + QL KA GESE A K +E K RVE Y +
Sbjct: 476 IRPNHWRAQLNKAVALLGQGESEEAKKALKEAF-KMTQRVEVYDAI 520
>gi|384449042|ref|YP_005661644.1| hypothetical protein CPK_ORF00096 [Chlamydophila pneumoniae LPCoLN]
gi|269302480|gb|ACZ32580.1| tetratricopeptide repeat family protein [Chlamydophila pneumoniae
LPCoLN]
Length = 339
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE ++ ++A +P+D+E +L V + ++L EA+D D+++ L+P + KA
Sbjct: 93 YEAAIEQYSAYVALHPDDVECWFSLGSVYHRLKRLQEALDCFDKILALDPWNPQSLYNKA 152
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ S + +I+ E + K+PL +A+ L S KR +KA E ++
Sbjct: 153 VILSEMDDEAESIRLLEVAVAKNPLYWKAWVKLGFLLSRS--------KRWDKATEAYER 204
Query: 251 EKK-KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + DL D + + K AL+ ++E + D + G+ + L++
Sbjct: 205 VVQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNAEDADAHFYVGLAHMDLKQMR 264
Query: 310 EAEKQF 315
EA + F
Sbjct: 265 EAYEAF 270
>gi|227823431|ref|YP_002827404.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234]
gi|227342433|gb|ACP26651.1| O-linked GlcNAc transferase [Sinorhizobium fredii NGR234]
Length = 295
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 86/220 (39%), Gaps = 20/220 (9%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + +A+NP+D EA ++ + A+ D+ I+L P+ ++ +
Sbjct: 62 EENIASLSSVIASNPSDPEAYNVRGSAYGRAGEFRRALADFDQAIKLNPSFYQAYANRGL 121
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS---DKKLNEVEKRIEKAMERC 248
V G+ +AA+ + L+ + AY G Y + D N+ K I
Sbjct: 122 VHRNMGDQQAALSDYNAALQLNSSYDVAYIGRGNLYRQANQLDNAFNDFNKAI------- 174
Query: 249 KKEKKKSDLRDF--KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
+ +D R + + LI Q + + H+ A+ + + P PY +GI Y
Sbjct: 175 --QLDTTDPRAYHNRGLIYQAR---NDHAHAIEDFSTAISLSPSSAEPYNGRGISYVAQG 229
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
D A F F + N E + + + + GEK
Sbjct: 230 DDDNA---FSDFNTAINLNGKLAESWANQALIYERRGEKA 266
>gi|423067416|ref|ZP_17056206.1| serine/threonine protein kinase with TPR repeat protein
[Arthrospira platensis C1]
gi|406710990|gb|EKD06192.1| serine/threonine protein kinase with TPR repeat protein
[Arthrospira platensis C1]
Length = 790
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN 235
+EL+P+ + K + GE + A+ E+ + DP A+HG +A G ++ +
Sbjct: 441 LELDPDNSDVLTSKGTLLYQTGEPQKALDAHEQAIAIDPNNARAWHGKGIALIGL-QRYD 499
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIA-QIKVMESK--HSEALRVYEELVKEEPRDF 292
E E+A + + S + L + Q K+ E+ +SEAL Y+++++E+PR
Sbjct: 500 EAVSAFEQA--KTIRPSAPSVWQSKALALEYQGKMAEAAQVYSEALATYDDILREQPRRA 557
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
++ +G + + L + ++A + ++K + P++
Sbjct: 558 EIWVERGSVLSKLGRHEQALESYQKALEINPQH 590
>gi|125543209|gb|EAY89348.1| hypothetical protein OsI_10852 [Oryza sativa Indica Group]
Length = 848
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 62 PSLLRTLTPLSSPLIKITSVTVAAAAL---LFMRLPFHSIKPAIAAPVAAAATVESTNES 118
PS R L L S L + A AL +F+ KP A ++
Sbjct: 381 PSHARALKLLGSALFGVGEYRAAEKALEEAIFL-------KPDYA-------------DA 420
Query: 119 TKDTTSAREDVSYEEKE-KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
D SA + +++ +E ++ + P ++AL L + + + + V A ++ R++
Sbjct: 421 HCDLGSALHAIGDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLS 480
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ PN + QL KA GESE A K +E K RVE Y
Sbjct: 481 IRPNHWRAQLNKAVALLGQGESEEAKKALKEAF-KMTQRVEVY 522
>gi|432931295|ref|XP_004081644.1| PREDICTED: LOW QUALITY PROTEIN: intraflagellar transport protein 88
homolog [Oryzias latipes]
Length = 840
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I + L + +Q A+ +R ++P + +WQL+ A +G + A++
Sbjct: 616 PSNINVITWLGAYYLDTQFCENAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALET 675
Query: 206 FEEILRKDPLRVEAYHGLV-MAYDGSDKKLNEVEKRIEKA 244
++ I RK P VE LV ++ D K++ + +++KA
Sbjct: 676 YQNIHRKFPDNVECLRFLVRLSTDMGLKEVQDYATKLKKA 715
>gi|385240221|ref|YP_005808063.1| hypothetical protein G9768_03615 [Chlamydia trachomatis G/9768]
gi|385242999|ref|YP_005810838.1| hypothetical protein CTG9301_03625 [Chlamydia trachomatis G/9301]
gi|385246607|ref|YP_005815429.1| hypothetical protein G11074_03610 [Chlamydia trachomatis G/11074]
gi|296436226|gb|ADH18400.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/9768]
gi|296438086|gb|ADH20247.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/11074]
gi|297140587|gb|ADH97345.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/9301]
Length = 335
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 14/208 (6%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P DIE L +L + + EA+ DR+++L+P + KA V S + E AI
Sbjct: 107 HPEDIECLFSLGSAYHRLLRYEEAIACFDRIMQLDPWNPQGLYNKAVVLSDMEDEEGAID 166
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
E ++++PL +A+ L G N++ R +A ER + + DL D +
Sbjct: 167 LLESTVKRNPLYWKAWVKL-----GYLLSRNKIWDRATEAYERVV--QLRPDLSDGHYNL 219
Query: 265 AQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL- 321
+ K AL+ ++E L+ E D Y+ G+ + L++ ++A F +R L
Sbjct: 220 GLCYLTLDKTRLALKAFQESLLLNAEDADAHFYI--GLAHMDLKQNEQAYDAF--YRALG 275
Query: 322 VPRNHPYREYFVDNMVATKIFGEKVDRE 349
+ +H Y + + + EK ++E
Sbjct: 276 INLDHERSHYLLGYLHHMQGESEKAEKE 303
>gi|452991372|emb|CCQ97230.1| hypothetical protein CULT_60006 [Clostridium ultunense Esp]
Length = 496
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 142 LAANPNDIEALQTL-MEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
L NP+++EAL L V + + K+ EAV ++ + + L + A + + GE E
Sbjct: 307 LKTNPDEVEALHGLGWTVWLSTGKVNEAVPILKKALSLTRDHLNIGFSLAWIYLHHGEWE 366
Query: 201 AAIKGFEEILRKDP--LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
A K E +LR+DP A L+ + GS ++ R+ R + L
Sbjct: 367 GAGKVVETLLRRDPDAALPLALSTLLSSLKGSWQEAEAYANRL-----RQTAGDRNRALG 421
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+F + +I + + EA+ ++ +++ P ++ QG+ + L + D+AE E +
Sbjct: 422 EF--VYGRILLSQHHLEEAIAAFQRSIRKNPYLRESFVLQGLSFYLNGQFDKAE---EVW 476
Query: 319 RRLVPRN 325
RR++ N
Sbjct: 477 RRILKNN 483
>gi|374851942|dbj|BAL54888.1| spermine/spermidine synthase family protein [uncultured Acidobacteria
bacterium]
Length = 1100
Score = 42.0 bits (97), Expect = 0.40, Method: Composition-based stats.
Identities = 50/194 (25%), Positives = 78/194 (40%), Gaps = 10/194 (5%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
S+ E +E + + NP+ EAL L V + +EA + RL+ +P E +L
Sbjct: 831 SFAEAFREYRRAIERNPHAAEALAGLRRVARTREHRLEAEALYTRLVRDDPQNLEARLAL 890
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIEKAME 246
A E E +LR+ R+ G L+ Y NE+ +E+
Sbjct: 891 AAWY----EEERRYDACLALLRESVERISRARGDLRLLSQYAACLAGANEL-AMLEEVCR 945
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
R S F L A I+ + K +EAL V+ +PRDF+ +I+ L
Sbjct: 946 RWLALAPGSGRAWFHL--AVIRSQQGKWAEALTFARRSVEADPRDFQARTLLAMIHAELG 1003
Query: 307 KKDEAEKQFEKFRR 320
+ A FE+ R
Sbjct: 1004 ETARARALFEEIAR 1017
Score = 42.0 bits (97), Expect = 0.48, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
E+ + LA P A L +R + K EA+ R +E +P +F+ + L A + +
Sbjct: 941 EEVCRRWLALAPGSGRAWFHLAVIRSQQGKWAEALTFARRSVEADPRDFQARTLLAMIHA 1000
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMER 247
GE+ A FEEI R + A+ +GL + G + E ++ +KA++R
Sbjct: 1001 ELGETARARALFEEIARDHADQALAFYNYGLFLLNAG---QFREAREQFQKALDR 1052
>gi|427729657|ref|YP_007075894.1| hypothetical protein Nos7524_2456 [Nostoc sp. PCC 7524]
gi|427365576|gb|AFY48297.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 276
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 45/85 (52%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
+ Q L N ND +A + + R+ S L A+ ++ +++ PN+ + + + +
Sbjct: 105 DFNQALQINSNDADAYKNRGKARVLSGDLPGAIADFNQALQINPNDADTYYSRGVARDNS 164
Query: 197 GESEAAIKGFEEILRKDPLRVEAYH 221
G+ + +I+ F + LR +P V+AY+
Sbjct: 165 GDLKGSIEDFNQALRINPNYVDAYN 189
>gi|402887181|ref|XP_003906981.1| PREDICTED: transmembrane and TPR repeat-containing protein 3 [Papio
anubis]
Length = 914
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A + +GE + A
Sbjct: 595 NNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEVWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + SK +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTSKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|73670079|ref|YP_306094.1| TPR repeat-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72397241|gb|AAZ71514.1| TPR repeat [Methanosarcina barkeri str. Fusaro]
Length = 927
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
SYEE + + +P + A L S EA+ ++ IE++P E K
Sbjct: 269 SYEEAITAYNESIELDPQNSVAWNGLGFAVASSGNYEEAIKFYNKAIEIDPQNSEALSNK 328
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMER 247
G E AIK ++ + +P A++ G ++ K L E+ +E +
Sbjct: 329 GFALYNVGNREEAIKALDKAIEVNPQNAVAWYDKGSIL------KNLGNYEEAVEAFDKA 382
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+ + KKS + K + EA++ Y++ ++ +P+D P+ +GI + L
Sbjct: 383 TELDPKKSSAWNNK---GNALSSLGNYDEAIKAYDKAIEIDPQDPGPWNNKGIALSNLGS 439
Query: 308 KDEAEKQFEK 317
+E+ K F+K
Sbjct: 440 YEESIKAFDK 449
>gi|157135487|ref|XP_001663464.1| smile protein [Aedes aegypti]
gi|108870211|gb|EAT34436.1| AAEL013316-PA, partial [Aedes aegypti]
Length = 683
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD--KKLNEVEKRIEKAMERCKKEKKK 254
G A+ + E +R+DP V+A++ ++ YD ++ +++ EV R +
Sbjct: 543 GNHNLALATWNETVRQDPKHVKAWNNMINVYDNANMNEQVLEVTARGLIHLPNHPNLLAA 602
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
+ K+ + EA ++Y EL+ P + + G++Y RK D+AE+
Sbjct: 603 RAIALAKM---------GNYPEAEQIYSELIVRHPGEEKYLQNMGVLYHRWRKLDQAERM 653
Query: 315 FEKFRRLVPR 324
+ K ++ P+
Sbjct: 654 YRKALKINPQ 663
>gi|47221980|emb|CAG08235.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P DI + L K Q +A+ +R ++PNE EW+L A +G AA++
Sbjct: 278 PCDISVIAWLGTYYFKKQYFEKAIKYFERATLIQPNEVEWRLRVAGCYRRSGNYHAALET 337
Query: 206 FEEILRKDPLRVEAYHGLV-MAYDGSDKKLNEVEKRIEKA--MERCKKEKKKS 255
++E K P +E LV + D +++ E +++KA M ++++ KS
Sbjct: 338 YKETHGKFPEDIECLTFLVRLTNDMGLEEVQEYANKLKKAEKMREVREQRMKS 390
>gi|15896690|ref|NP_350039.1| hypothetical protein CA_C3449 [Clostridium acetobutylicum ATCC 824]
gi|337738654|ref|YP_004638101.1| hypothetical protein SMB_G3487 [Clostridium acetobutylicum DSM
1731]
gi|384460165|ref|YP_005672585.1| hypothetical protein CEA_G3453 [Clostridium acetobutylicum EA 2018]
gi|15026540|gb|AAK81379.1|AE007842_7 TPR-repeat-containing protein [Clostridium acetobutylicum ATCC 824]
gi|325510854|gb|ADZ22490.1| TPR-repeat-containing protein [Clostridium acetobutylicum EA 2018]
gi|336291719|gb|AEI32853.1| TPR repeat-containing protein [Clostridium acetobutylicum DSM 1731]
Length = 305
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 8/165 (4%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLK-AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
KLV+++D +++ EL E ++ A + G+ E A + ++E L D AY+
Sbjct: 21 NKLVKSLDYYNKVYELTNGEDVDTIINLALIYDSLGKVEKAEEYYKEALSIDDYEERAYY 80
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
GL YD + E K KA+ K +A + + + A+ Y
Sbjct: 81 GLATIYDEKED-YEEAIKLYNKAIYINPNYHKAY------FFLANAYDLSGQKNLAIETY 133
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
E+L+ + DF L G IY K D A + F K ++ P NH
Sbjct: 134 EKLLSLDDMDFWSNLNLGCIYEEQNKNDLAYRLFSKALKINPNNH 178
>gi|222624615|gb|EEE58747.1| hypothetical protein OsJ_10236 [Oryza sativa Japonica Group]
Length = 827
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 62 PSLLRTLTPLSSPLIKITSVTVAAAAL---LFMRLPFHSIKPAIAAPVAAAATVESTNES 118
PS R L L S L + A AL +F+ KP A ++
Sbjct: 360 PSHARALKLLGSALFGVGEYRAAEKALEEAIFL-------KPDYA-------------DA 399
Query: 119 TKDTTSAREDVSYEEKE-KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
D SA + +++ +E ++ + P ++AL L + + + + V A ++ R++
Sbjct: 400 HCDLGSALHAIGDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLS 459
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ PN + QL KA GESE A K +E K RVE Y
Sbjct: 460 IRPNHWRAQLNKAVALLGQGESEEAKKALKEAF-KMTQRVEVY 501
>gi|158521101|ref|YP_001528971.1| hypothetical protein Dole_1087 [Desulfococcus oleovorans Hxd3]
gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 808
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 11/139 (7%)
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAME 246
KA AG E A + ++LR++P +A H G +MA + K L E + KA+E
Sbjct: 12 KAVALHRAGSLEGAETLYRDLLRENPNHADALHLLGTIMA---AKKDLVAAEGTLRKAVE 68
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
+ K+ F + Q+ + + + EA ++ V +P + + G I
Sbjct: 69 KAPKQAA------FHNSLGQVLLKKGQTDEAAAAFQRAVSLDPGLAQAHFNLGKISKAAG 122
Query: 307 KKDEAEKQFEKFRRLVPRN 325
+ DEA+ FEK L P +
Sbjct: 123 RADEAKTFFEKTLNLAPHH 141
>gi|163846279|ref|YP_001634323.1| hypothetical protein Caur_0695 [Chloroflexus aurantiacus J-10-fl]
gi|222524035|ref|YP_002568505.1| hypothetical protein Chy400_0750 [Chloroflexus sp. Y-400-fl]
gi|163667568|gb|ABY33934.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aurantiacus
J-10-fl]
gi|222447914|gb|ACM52180.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus sp. Y-400-fl]
Length = 1766
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
+++ ++ +A+ +I ++E P+ E Q L + + AA FE++L+ DP + A
Sbjct: 17 LEANQIEQAIGLIQHILEHHPDNLEAQRLLGEAYLAKRDLPAATATFEQVLQVDPENIPA 76
Query: 220 YHGLVMAYDGS---DKKLNEVEKRIE 242
+ GL MAY+ DK + E E+ +E
Sbjct: 77 HVGLGMAYEWQGRLDKAIAEFEQALE 102
>gi|325281165|ref|YP_004253707.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324312974|gb|ADY33527.1| Tetratricopeptide TPR_1 repeat-containing protein [Odoribacter
splanchnicus DSM 20712]
Length = 317
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 79/178 (44%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D+E L+ L+ + ++ EA++ RL+++EP+ L++A + A + EAAI
Sbjct: 57 DVEVLEHLVGAYNREDRMEEAIETAGRLVDIEPDNIPVLLMRANLNFMAEKYEAAIADCN 116
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
++ D AY+ A + L + + + K D + LL A++
Sbjct: 117 RVIALDATNASAYYLAAKAKKAAGDVLGTI-------VSLSQAITIKEDFAEALLLRAEM 169
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + + L+ E+++ P + +L +G ++ L AE+ +E L P N
Sbjct: 170 MLSTRDYKDGLQDIEKVIGLMPEEENAFLIRGRLHEALGDDQAAEQDYEVVTGLNPFN 227
>gi|427723754|ref|YP_007071031.1| hypothetical protein Lepto7376_1877 [Leptolyngbya sp. PCC 7376]
gi|427355474|gb|AFY38197.1| Tetratricopeptide TPR_1 repeat-containing protein [Leptolyngbya sp.
PCC 7376]
Length = 712
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 20/140 (14%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV-EAYHGLVM 225
E + +D LIEL PN + Q KA+ +G+ +AAI+ +++ + P +H +
Sbjct: 273 EILTGLDSLIELRPNYSQAQFDKARHLEASGQIDAAIRSYKKGIELGPSEYPSVWHTI-- 330
Query: 226 AYDGSDKKLNEVEKRIEKAMER------CKKEKKKSDLRDFKLLIAQIKVMESKHSEALR 279
+L E + +IE+A+ CK +KS + +L + +EAL
Sbjct: 331 ------GELQEKQDQIEEAITSYTKAIDCKPSSEKSWEARWSILSKL-----GRETEALT 379
Query: 280 VYEELVKEEPRDFRPYLCQG 299
+YE+ V ++P D + CQG
Sbjct: 380 LYEKAVADDPNDRIAWFCQG 399
>gi|355786395|gb|EHH66578.1| Protein SMILE [Macaca fascicularis]
Length = 914
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A + +GE + A
Sbjct: 595 NNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEVWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + SK +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTSKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|237803113|ref|YP_002888307.1| hypothetical protein JALI_6881 [Chlamydia trachomatis B/Jali20/OT]
gi|231274347|emb|CAX11142.1| tetratricopeptide repeat protein [Chlamydia trachomatis
B/Jali20/OT]
Length = 335
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P DIE L +L + + EA+ DR+ +L+P + KA V S + E AI
Sbjct: 107 HPEDIECLFSLGSAYHRLLRYEEAIACFDRITQLDPWNPQGLYNKAVVLSDMEDEEGAID 166
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
E ++++PL +A+ L G N++ R +A ER + + DL D +
Sbjct: 167 LLESTVKRNPLYWKAWVKL-----GYLLSRNKIWDRATEAYERVV--QLRPDLSDGHYNL 219
Query: 265 AQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
+ K AL+ ++E L+ E D Y+ G+ + L++ ++A F + R +
Sbjct: 220 GLCYLTLDKTRLALKAFQESLLLNAEDADAHFYI--GLAHMDLKQNEQAYDAFYRALR-I 276
Query: 323 PRNHPYREYFVDNMVATKIFGEKVDRE 349
+H Y + + + EK ++E
Sbjct: 277 NLDHERSHYLLGYLHHMQGESEKAEKE 303
>gi|110597057|ref|ZP_01385346.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
gi|110341248|gb|EAT59713.1| TPR repeat [Chlorobium ferrooxidans DSM 13031]
Length = 573
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 38/205 (18%)
Query: 155 LMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
L+E++++ + A+ ++ L+E + + +L ++ G+ E+A K F +++ +P
Sbjct: 196 LLEIKLRHYQ--NAIGTLNELVEQGDGKEKLRLTLGELYLQTGQYESAFKSFRDVIDDNP 253
Query: 215 LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLL----------I 264
L V A+ L E +++ +E DL F LL +
Sbjct: 254 LYVPAWLAL-----------------FEVSVQSGNRETFLKDLHRFHLLGRIGVDQKIAV 296
Query: 265 AQIKVMESKHSEALR-----VYEELVKEEPRDFRPYLCQGIIYTLLRKKDE--AEKQFEK 317
A++ ++ S A + EL + PR+ YL +G ++L+++D AE+ F K
Sbjct: 297 ARLFLIRSLKDSAYEAPAQVMISELNRHYPRNGGVYLLRG--QSMLQRQDAQGAERYFLK 354
Query: 318 FRRLVPRNHPYREYFVDNMVATKIF 342
R VP N E V + K F
Sbjct: 355 ARSFVPGNPVIEEALVSAYIMQKEF 379
>gi|392403999|ref|YP_006440611.1| Tetratricopeptide TPR_2 repeat-containing protein [Turneriella
parva DSM 21527]
gi|390611953|gb|AFM13105.1| Tetratricopeptide TPR_2 repeat-containing protein [Turneriella
parva DSM 21527]
Length = 234
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 254 KSDLRDFKLLI--AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
K+ D +LLI I + K +AL+VYE ++ P YL GI +KK +A
Sbjct: 148 KNTFTDHRLLINAGAINLRAKKSRDALKVYERAIQSYPDLAEAYLGAGIAAQNEKKKADA 207
Query: 312 EKQFEKFRRLVP 323
+K FEK+ L P
Sbjct: 208 KKHFEKYLALSP 219
>gi|333892372|ref|YP_004466247.1| hypothetical protein ambt_04475 [Alteromonas sp. SN2]
gi|332992390|gb|AEF02445.1| hypothetical protein ambt_04475 [Alteromonas sp. SN2]
Length = 937
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP-NEFEWQLLKAQVQS 194
K+ +A++PN + A+ L + +++++LVEA +I I +EP N W+ LK Q+
Sbjct: 155 KDYNTIVASSPNFVPAINGLASIALQNEELVEANQLIQNAISIEPENAISWR-LKGQLAY 213
Query: 195 YAGESEAAIKGFEEIL---RKDPLRVEAYHGLVMAY 227
G+ +AA ++ L R DP+ A LV Y
Sbjct: 214 RQGDKDAATANLQKALTFNRNDPI---ALRNLVDLY 246
>gi|294056199|ref|YP_003549857.1| hypothetical protein [Coraliomargarita akajimensis DSM 45221]
gi|293615532|gb|ADE55687.1| TPR repeat-containing protein [Coraliomargarita akajimensis DSM
45221]
Length = 665
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
IEQ L P+D + LQ V + S A+ I R I+ EP+E + +LLKA V +
Sbjct: 58 IEQILRIAPHDSKTLQLKARVEMDSGNPAGALQAIQRAIDSEPDELQHRLLKALVLGHLE 117
Query: 198 ESEAAIKGFEEIL-RKDP 214
+ +AAI E +L + DP
Sbjct: 118 QQDAAIAEIEHVLGQSDP 135
>gi|115452075|ref|NP_001049638.1| Os03g0263900 [Oryza sativa Japonica Group]
gi|108707321|gb|ABF95116.1| calcium-binding EF hand family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113548109|dbj|BAF11552.1| Os03g0263900 [Oryza sativa Japonica Group]
Length = 848
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 62 PSLLRTLTPLSSPLIKITSVTVAAAAL---LFMRLPFHSIKPAIAAPVAAAATVESTNES 118
PS R L L S L + A AL +F+ KP A ++
Sbjct: 381 PSHARALKLLGSALFGVGEYRAAEKALEEAIFL-------KPDYA-------------DA 420
Query: 119 TKDTTSAREDVSYEEKE-KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
D SA + +++ +E ++ + P ++AL L + + + + V A ++ R++
Sbjct: 421 HCDLGSALHAIGDDDRAVQEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLS 480
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ PN + QL KA GESE A K +E + RVE Y
Sbjct: 481 IRPNHWRAQLNKAVALLGQGESEEAKKALKEAFKMTQ-RVEVY 522
>gi|113478135|ref|YP_724196.1| sulfotransferase [Trichodesmium erythraeum IMS101]
gi|110169183|gb|ABG53723.1| sulfotransferase [Trichodesmium erythraeum IMS101]
Length = 887
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ + NP+ ++A Q L ++ +K++ EA++ + IEL+P+ + +
Sbjct: 162 EEAIAYFQKAINFNPSLVDAYQNLGDISLKTKDFNEAINYYQKAIELKPDLWIVHYKLGK 221
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV--EKRIEKAMERCK 249
+ GE + A F + +P + +Y K L ++ K+ + C
Sbjct: 222 LFQEIGELDTATIEFNLAIELNPSFIYSY-----------KNLGDILHHKKDLDVAKNCY 270
Query: 250 KE--KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
K+ +SD+ D I +I + + + +EA+ + ++K P+ PY G IYT +
Sbjct: 271 KKVIAIQSDVWDAHRKINEILLAQERLNEAIIGCQLVIKINPKLSWPYKIMGNIYTQNKA 330
Query: 308 KDEA 311
D+A
Sbjct: 331 WDKA 334
>gi|402771088|ref|YP_006590625.1| hypothetical protein BN69_0523 [Methylocystis sp. SC2]
gi|401773108|emb|CCJ05974.1| Tetratricopeptide TPR_1 repeat-containing protein [Methylocystis
sp. SC2]
Length = 291
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP+ EA T + + EAV + I+LEPN +A G+S+AA
Sbjct: 74 NPSSAEAYDTRGVAYARVGRFQEAVADFTQAIKLEPNNSAAYTNRALALRQMGQSDAARA 133
Query: 205 GFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
F+ + +P AY G L+ A D+ L ++++ I E + +
Sbjct: 134 DFDRAIEVNPKHAPAYVGRANLLRAQGNLDQALADLDQAIRLNPESAQAFHARG------ 187
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
LI Q + +++ A+ ++ + +P PYL +G L K D+A + F
Sbjct: 188 -LIHQKRGDDAR---AVTDFDNAIDRDPFAAAPYLARGESLVTLGKYDKAVEDFN 238
>gi|118580646|ref|YP_901896.1| hypothetical protein Ppro_2231 [Pelobacter propionicus DSM 2379]
gi|118503356|gb|ABK99838.1| Tetratricopeptide TPR_2 repeat protein [Pelobacter propionicus DSM
2379]
Length = 265
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES 199
+ LA P+D +AL TL ++ +S + A+ R+ ELEP + + + V S
Sbjct: 65 EGLAIAPDDTDALTTLGDLLFESGQHEAAIASYTRVRELEPGDMDVLVSIGLVYSSLDRG 124
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE 238
+ AI F + L DP V A++ L A G D V+
Sbjct: 125 DEAIACFRQALESDPRNVFAWNALGDALYGGDDVQGAVD 163
>gi|423278668|ref|ZP_17257582.1| hypothetical protein HMPREF1203_01799 [Bacteroides fragilis HMW
610]
gi|404585660|gb|EKA90264.1| hypothetical protein HMPREF1203_01799 [Bacteroides fragilis HMW
610]
Length = 921
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y ++E+ +EQ +A P ++ L L+ V I + + + + IDR++ ++PN + +KA
Sbjct: 185 YADQERVLEQAIAKYPVSLDFLYNLVNVHIATNNMEKLIGAIDRILAVDPNNDKVLPIKA 244
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA-YDGSDKKLNE---VEKRIEKAME 246
++ G++ A+ ++ + P E G+ A ++ + + +N + E A+
Sbjct: 245 RILERQGKNVEALDIYKRLYALHPESFELMTGVARANFNCATEIVNNGATIANDTEYALV 304
Query: 247 RCKKEKKKSDLRDFKLLIAQ 266
R + D +D L I Q
Sbjct: 305 RQRASGYLMDAKDLFLKILQ 324
>gi|15618603|ref|NP_224889.1| hypothetical protein CPn0693 [Chlamydophila pneumoniae CWL029]
gi|15836225|ref|NP_300749.1| hypothetical protein CPj0693 [Chlamydophila pneumoniae J138]
gi|16752347|ref|NP_444605.1| type III secretion chaperone [Chlamydophila pneumoniae AR39]
gi|33242051|ref|NP_876992.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Chlamydophila pneumoniae TW-183]
gi|4376995|gb|AAD18832.1| TPR Repeats-CT683 hypothetical protein [Chlamydophila pneumoniae
CWL029]
gi|8163354|gb|AAF73621.1| type III secretion chaperone, putative [Chlamydophila pneumoniae
AR39]
gi|8979065|dbj|BAA98900.1| TPR repeats-CT683 hypothetical protein [Chlamydophila pneumoniae
J138]
gi|33236561|gb|AAP98649.1| UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
[Chlamydophila pneumoniae TW-183]
Length = 339
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE ++ ++A +P+D+E +L V + ++L EA+D D+++ L+P + KA
Sbjct: 93 YEAAIEQYSAYVALHPDDVECWFSLGSVYHRLKRLQEALDCFDKILALDPWNPQSLYNKA 152
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ S + +I+ E + K+PL +A+ L S KR +KA E ++
Sbjct: 153 VILSEMDDEAESIRLLEVAVAKNPLYWKAWVKLGFLLSRS--------KRWDKATEAYER 204
Query: 251 EKK-KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + DL D + + K AL+ ++E + D + G+ + L++
Sbjct: 205 VVQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNAEDADAHFYVGLAHLDLKQMR 264
Query: 310 EAEKQF 315
EA + F
Sbjct: 265 EAYEAF 270
>gi|425456550|ref|ZP_18836258.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9807]
gi|389802328|emb|CCI18610.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9807]
Length = 707
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW--QLLKAQVQSYA 196
+Q L NP+ +EA Q + + Q+ EA+ + ++ I++ P+ W L + Q
Sbjct: 356 DQALKINPDYLEAFQGKADALLALQRYSEALIIYEKAIQINPDS-AWPAWLGRGQALDKL 414
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGL------VMAYDGSDKKLNEVEK-RIEKAMERCK 249
G+++ A++ FE +L +P +A+ G + Y + K L+++ + A K
Sbjct: 415 GKNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYK 474
Query: 250 KEKKKSDLRDFKLLIA---QIKVMES-----------------KHSEALRVYEELVKEEP 289
K +L D++ + Q +ES K +EAL Y + + P
Sbjct: 475 KGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINEALESYSKAGQFNP 534
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFV 333
+ + + QGII L +K EA E F + N Y + ++
Sbjct: 535 QFSQAHYSQGIILQKLGRKPEA---LEAFTQATKANSNYYQAWL 575
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 100/228 (43%), Gaps = 20/228 (8%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +D+L+ + N+ + K
Sbjct: 418 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKTWYKKGW 477
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G+ +LN++ + +E + +
Sbjct: 478 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSLYQLNKINEALESYSKAGQF 532
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q K+ + EAL + + K ++ +L QG + + + E
Sbjct: 533 NPQFSQAHYSQGIILQ-KL--GRKPEALEAFTQATKANSNYYQAWLHQGALLHQMERFQE 589
Query: 311 AEKQFEKFRRLVPR---------NHPYREYFVDNMVATKIFGEKVDRE 349
A +EK RRL + N YR DN A + + + R+
Sbjct: 590 AIASYEKARRLSSQKAEVFIGIGNAWYR--LGDNYQAINAYQQAIQRQ 635
>gi|333987251|ref|YP_004519858.1| hypothetical protein MSWAN_1036 [Methanobacterium sp. SWAN-1]
gi|333825395|gb|AEG18057.1| Tetratricopeptide TPR_2 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 228
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E K E+ L +PN+ +AL + +K EA D +R +EL P F+ KA
Sbjct: 100 YHEALKSSEEALKLDPNNYKALSNKARSLSRLKKYHEAFDYCNRSLELNPEYFKAWCYKA 159
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
+ +S+ A++ FE++L +P A+ G +A
Sbjct: 160 IILLQLEKSDEALQCFEKVLILNPNNAHAWSGKGLA 195
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 36/212 (16%)
Query: 126 REDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE- 184
R+D +EE + +++ L +PN+ E + L EAV+ +D ++E+ P +
Sbjct: 28 RQD-KFEESNQCLDEVLKLDPNNDEVWFLKSIIFGLMDNLNEAVNCLDHVVEINPKNIDA 86
Query: 185 WQLLKAQVQSYAGESEAAIKGFEEILRKDP-------------LRVEAYHGLVMAYDGSD 231
WQ K ++ + G+ A+K EE L+ DP R++ YH A+D +
Sbjct: 87 WQ-RKGKLLNKLGKYHEALKSSEEALKLDPNNYKALSNKARSLSRLKKYHE---AFDYCN 142
Query: 232 KKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRD 291
+ L E+ KA C K A I + K EAL+ +E+++ P +
Sbjct: 143 RSL-ELNPEYFKAW--CYK--------------AIILLQLEKSDEALQCFEKVLILNPNN 185
Query: 292 FRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ +G+ +L + +EA K +++ L P
Sbjct: 186 AHAWSGKGLALEMLGRTEEALKCYKRALELDP 217
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ K E+ +D +++L+PN E LK+ + A+ + ++ +P ++A+
Sbjct: 28 RQDKFEESNQCLDEVLKLDPNNDEVWFLKSIIFGLMDNLNEAVNCLDHVVEINPKNIDAW 87
Query: 221 H--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVME--SKHSE 276
G ++ G K +E K E+A+ K D ++K L + + + K+ E
Sbjct: 88 QRKGKLLNKLG---KYHEALKSSEEAL--------KLDPNNYKALSNKARSLSRLKKYHE 136
Query: 277 ALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN-HPY 328
A ++ P F+ + + II L K DEA + FEK L P N H +
Sbjct: 137 AFDYCNRSLELNPEYFKAWCYKAIILLQLEKSDEALQCFEKVLILNPNNAHAW 189
>gi|119357636|ref|YP_912280.1| hypothetical protein Cpha266_1840 [Chlorobium phaeobacteroides DSM
266]
gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3560
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 94 PFHSIKPAIAAPVAAAATVESTNESTKDTTSA---REDVSYEEKEKEIEQHLAANPNDIE 150
P +++ +++ P AA ST E + A ++ +E E ++ L+ P IE
Sbjct: 2202 PLSTVERSVSRPSHAAG--RSTKEESVKLQRALKLHQEGRLDEAEVIYQEILSIQPLHIE 2259
Query: 151 ALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE-FEWQLLKAQVQSYAGESEAAIKGFEEI 209
ALQ L + + +K +AV + +R +E++P+ W L + G E A+ +E+
Sbjct: 2260 ALQFLASMATRRKKYTDAVSLFERALEIDPDHPVSWCTLGIALHE-LGRYEEALASYEKA 2318
Query: 210 LRKDPLRVEAYHG-----LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
+ P VE Y L++ K+ E EKA+ + + R LL
Sbjct: 2319 IVLYPGFVEVYSNRGNTFLIL------KRYQEALSSYEKALAINPEYTRAYFNRGSALL- 2371
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
++K ++ EAL Y+++ +P Y+ ++ L++ EA +EK L P
Sbjct: 2372 -ELK----RYEEALADYDKVTALKPDYIVAYINCAVVLQELKRYREAIGSYEKALALKPE 2426
Query: 325 NHPYREYFV 333
+ R ++
Sbjct: 2427 YNFLRGLYL 2435
>gi|78185264|ref|YP_377699.1| hypothetical protein Syncc9902_1697 [Synechococcus sp. CC9902]
gi|78169558|gb|ABB26655.1| conserved hypothetical protein [Synechococcus sp. CC9902]
Length = 269
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 21/207 (10%)
Query: 109 AATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEA 168
AA++ S + + T +D+ E+ +E PN +TL+E + + +A
Sbjct: 25 AASLSSQTSAITNRTD--DDLQAEQLLDRLEAQGELAPN---TRRTLLERLLAQGRFEDA 79
Query: 169 VDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA-- 226
+ V+ +P + LL A +Q G+++ A+ +++L PL E L++
Sbjct: 80 LRVLQPWRAEQPRSLKLALLSADLQRLTGDTDGALSELKQLLPLHPLDAEVLQLLLLVEQ 139
Query: 227 YDGSDKK-LNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELV 285
+G++K+ L +++KR + E LL+A + + A +Y +L
Sbjct: 140 TNGNEKQALKDLQKRFNSQQPGIRLE--------LGLLLADAQRQGGQPQAAADLYRQLA 191
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAE 312
E P D RP L ++ K+DE +
Sbjct: 192 NESPSDIRPPLALALL-----KRDEGK 213
>gi|344345623|ref|ZP_08776459.1| hypothetical protein MarpuDRAFT_3273 [Marichromatium purpuratum
984]
gi|343802795|gb|EGV20725.1| hypothetical protein MarpuDRAFT_3273 [Marichromatium purpuratum
984]
Length = 425
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 7/152 (4%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
++Q LA NP D E L TL + +L ++ R I L P+ E V G
Sbjct: 198 MQQALALNPKDPELLNTLGNILHDLGRLAQSQSCFSRAIALSPDYAEAHNSLGAVLKSLG 257
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+ AI + L P EAY + + Y + +L++ + E A++ K D
Sbjct: 258 RFDEAIASYRRALALKPDLSEAYSNIGIVYKDT-GELDKARRYYEMALD------KDPDN 310
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
+ + + + +H EA+R Y ++ P
Sbjct: 311 LNARNNLGGVLQDLGRHDEAIRCYSAAIQGRP 342
>gi|428174405|gb|EKX43301.1| hypothetical protein GUITHDRAFT_110718 [Guillardia theta CCMP2712]
Length = 899
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 10/166 (6%)
Query: 155 LMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
LM++ + Q AVD I+L PN E + G + AIK +E L+ +P
Sbjct: 134 LMKLGLHQQ----AVDAWQTAIQLHPNAAEAKANFGATLHQLGMYDEAIKFYEMSLQANP 189
Query: 215 LRVEAYHGLVMAY--DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES 272
Y L Y G K +V R+EK + + K K+ ++ ++ + +
Sbjct: 190 NLHAVYENLASLYREKGEQDKAQQVRNRLEKVV-KANKSSGKTYMQLQEMGLDHLNA--G 246
Query: 273 KHSEALRVY-EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
K+ EA + + E L KE ++ + G++Y LR+ D++ + K
Sbjct: 247 KYVEAEKFFLEALGKEGGDNYAIHFNLGLVYFFLRQWDKSLASYAK 292
>gi|94267014|ref|ZP_01290659.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
gi|93452288|gb|EAT02929.1| TPR repeat:Tetratricopeptide TPR_4 [delta proteobacterium MLMS-1]
Length = 585
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 85/206 (41%), Gaps = 26/206 (12%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES 199
Q L +P + ++ L + + S++ EA++ + R+ EL P E E L A + + AG+
Sbjct: 82 QALRCDPLALPVMRNLAMLLLASEQRQEAIEWLQRMAELRPGETEIHSLLANLYAAAGQP 141
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKL-------NEVEKRIEKAMERCKKEK 252
+ A + +IL +P L Y +++ N V ++ E AM +
Sbjct: 142 DKAAAIYRKILAAEPGNANVTLLLATLYARQERRQDALVMLENLVLQQPEMAMAHFYLAR 201
Query: 253 KKSDLRDFKLLI-------------------AQIKVMESKHSEALRVYEELVKEEPRDFR 293
+L D + A+ M ++ E+LR+Y ++V E P D R
Sbjct: 202 LHRELGDLPAALAAYERALALQWSAAMAREAAETYEMAGRYEESLRLYRQVVAENPADER 261
Query: 294 PYLCQGIIYTLLRKKDEAEKQFEKFR 319
IY L + DEA + + R
Sbjct: 262 TRGLLANIYLRLERVDEALDELAELR 287
>gi|73671072|ref|YP_307087.1| TPR domain-containing protein [Methanosarcina barkeri str. Fusaro]
gi|72398234|gb|AAZ72507.1| TPR-domain containing protein [Methanosarcina barkeri str. Fusaro]
Length = 1979
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K E+ NP + E L IK + E++D DR++++ P + V +Y
Sbjct: 1773 KAFEKAALFNPKNEETLYNAATTLIKLNRPQESIDYFDRILDISPENLD-------VLNY 1825
Query: 196 AGES-------EAAIKGFEEILRKDPLRVEAYHGL-VMAYDGSDKKLNEVEKR-IEKAME 246
G + A+K F+ L KDP ++A + + V+ + +K+ E R ++A+
Sbjct: 1826 KGIAFCKLEMYREALKAFDLALEKDPENIKAIYSVGVVCFK---QKMYETACRAFDEAL- 1881
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
+ L+ + +A+I+ ++ +ALR ++ L++ P D + +G+I L
Sbjct: 1882 -AINPWHEQSLKYLGISLAKIE----EYEDALRTFDRLLRIRPHDVQAMNYRGVILGKLG 1936
Query: 307 KKDEAEKQFEKFRRLVP 323
K EA F + RL P
Sbjct: 1937 KYTEAINTFNEILRLYP 1953
>gi|89095046|ref|ZP_01167974.1| Tetratricopeptide [Neptuniibacter caesariensis]
gi|89080678|gb|EAR59922.1| Tetratricopeptide [Oceanospirillum sp. MED92]
Length = 789
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 109/238 (45%), Gaps = 40/238 (16%)
Query: 122 TTSAREDVS---YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL 178
+A+E ++ YE E L NPN +EAL + +V + + + ++R+IEL
Sbjct: 31 VANAKEHIAKGDYEAAHIEFRNALQINPNHVEALYEVTKVFEQKKDWAKIHRYLERVIEL 90
Query: 179 EPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP--LRVEAYHGLVMAYDGSDKKLNE 236
+P+ + + ++ A + + A++ E+ +R P +V ++H +V+ KL +
Sbjct: 91 QPDHVDALVAIGGIELTAQQLDKALERSEKAMRVAPGSAKVRSFHSVVLF------KLGD 144
Query: 237 VEKRIEKAMERCKKEKKKSDL-------------------------RDFKLLIAQIKVM- 270
E + +A+E K + + D + +L+ +KV
Sbjct: 145 AEGGVREALESLKIDPENIDAILLLASERLKAGDSLGALDYLNEADKQDNILVQLMKVRA 204
Query: 271 --ESKH-SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
E K+ + A + +EEL+K+ P+D + YL + L ++++A++ ++ +P N
Sbjct: 205 FNEQKNLAGATQTFEELIKQYPQDEKYYLALAKQFLLFGEREKADQVLQRALTDLPDN 262
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRL--IELEPNEFEWQLL 188
Y + E IE++L NP DI AL+ +V++ +K EA + DR+ + +E +E E Q+
Sbjct: 451 YTKLESVIEKYLHLNPRDINALKISAQVKLTLRKWGEAQAIADRIDKLNIEADEAE-QIR 509
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERC 248
A + E +I+ FE +V+ LV +Y + K+I+ A+
Sbjct: 510 GAALLGQKRNLE-SIEAFERAYEASQSKVKPMRALVGSYVAA--------KQIDNAVSFL 560
Query: 249 KKE-KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
K +K +D R+ L+AQ+ + K EA ++ E + P++ Y
Sbjct: 561 KSVLEKDTDNREALSLLAQVYFLIDKREEAEKLLVEGMNNYPKEGTFY 608
>gi|380797473|gb|AFE70612.1| transmembrane and TPR repeat-containing protein 3, partial [Macaca
mulatta]
Length = 718
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A + +GE + A
Sbjct: 399 NNADLWYNLAIVYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEAR 458
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 459 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEVWMKKAI------KLQADFRSALF 510
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + SK +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 511 NLALLYSQTSKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 569
Query: 321 LVPRN 325
+ P N
Sbjct: 570 MDPSN 574
>gi|118367971|ref|XP_001017195.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89298962|gb|EAR96950.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 496
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K++ + + NP+ E+ L K + +++ +++ + L ++ E A
Sbjct: 159 KKLYECINLNPDHTESYLQLGIGYRKIKNYSKSIQYLNQYLNLTSDKSEAHYQLALTYED 218
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAY------DGSDKKLNEVEKRIEKAMERCK 249
E AIK +++ L +P +AY + MAY D ++K L++V K+++
Sbjct: 219 QNELRDAIKCYKKALEYNPNNYKAYKNITMAYIELKKFDKANKYLSKVPKQLQD------ 272
Query: 250 KEKKKSDLRDFKLLIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
DF L A ++E K+ EA YE+ ++ +D++ YL G Y + +
Sbjct: 273 ---------DFDFLSATGYMLEQDGKYEEAAAYYEQFGEKFQKDYKFYLSLGNCYLKMGQ 323
Query: 308 KDEAEKQFEKFRRLVPRNHPYREYF 332
D AE + + L P EYF
Sbjct: 324 FDLAENMYSEGLMLSP------EYF 342
>gi|410615646|ref|ZP_11326664.1| hypothetical protein GPSY_4952 [Glaciecola psychrophila 170]
gi|410164828|dbj|GAC40553.1| hypothetical protein GPSY_4952 [Glaciecola psychrophila 170]
Length = 917
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 87/191 (45%), Gaps = 16/191 (8%)
Query: 158 VRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
+ + ++L +A+ I+ L+ L+P+ E LLKAQ+ + + A+ FE+ P
Sbjct: 170 LSMSDKQLGDAIIKIETLLSLQPDLPEANLLKAQLATLNKDFAGAVTSFEKYYELLPEVP 229
Query: 218 EAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEA 277
++ L +AY +++ EK ++ ++ + + L+ ++ ++ +A
Sbjct: 230 QSRIFLAIAYI-KNQQFELAEKHLDLLLKINSTQPFLNQLKGL------VRYQDADFGQA 282
Query: 278 LRVYEELVKEEPRDFRPY-LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD-- 334
+++ EL + D P + GII T L ++A + E + VP HP R F
Sbjct: 283 -KIHMELAIQNGLDNVPNRVIAGIIATRLENYEQAYRYLESVQEEVPDEHPTRGLFAAVA 341
Query: 335 -----NMVATK 340
NMVAT
Sbjct: 342 LKLGYNMVATN 352
>gi|300871059|ref|YP_003785931.1| hypothetical protein BP951000_1446 [Brachyspira pilosicoli 95/1000]
gi|300688759|gb|ADK31430.1| TPR domain-containing protein [Brachyspira pilosicoli 95/1000]
Length = 653
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 114 STNESTKDTTSAREDVS-YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVI 172
+++E+ + +A+ D++ YEE K+ + + NPN EA + EAV+
Sbjct: 474 NSSEAYSNRGNAKSDLNQYEEAIKDYNKAIELNPNYSEAYNNRGNAKTNLSLYKEAVEDY 533
Query: 173 DRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
++ IEL PN E + ++ G +E AIK + + + +AY +V+A
Sbjct: 534 NKAIELNPNNSEVYNNRGTAKANLGNNEEAIKDYNRSIELNSNNAQAYFNMVLA 587
>gi|116072857|ref|ZP_01470122.1| hypothetical protein BL107_10122 [Synechococcus sp. BL107]
gi|116064383|gb|EAU70144.1| hypothetical protein BL107_10122 [Synechococcus sp. BL107]
Length = 265
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 19/201 (9%)
Query: 115 TNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDR 174
T +S+ +D+ EE +E PN + L+E + + +A+ V+
Sbjct: 23 TTQSSALGNQTNDDLQAEELLDRLEAQEELTPN---TRRKLLERLLARGRFEDALLVLQP 79
Query: 175 LIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSD 231
+ +P LL A +Q G + A+ +++L PL + L+ +
Sbjct: 80 WLAEQPRSLNLALLSADLQRLTGNIDGAVSELKQLLSLHPLDAQVLQLLLLVEQTNGNGE 139
Query: 232 KKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRD 291
+ LN+++KR + E LL+A ++ + A ++Y +L E P D
Sbjct: 140 QALNDLQKRFNGQQPGTRLE--------LGLLLADALRLKGQPQVAEQLYGQLANESPAD 191
Query: 292 FRPYLCQGIIYTLLRKKDEAE 312
RP L ++ K+DE E
Sbjct: 192 IRPPLALALM-----KRDEGE 207
>gi|91203787|emb|CAJ71440.1| hypothetical protein kustc0695 [Candidatus Kuenenia
stuttgartiensis]
Length = 433
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 132 EEKEKEIEQHLAANP--NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+E KE+ L NP +++ + LM +R +K EA+ ++ +E+ P E + +
Sbjct: 241 DEAIKELNTTLEINPKYSNVYVVFGLMSLR--EKKFEEALVHYNKAMEINPENIEARYQR 298
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
A V + + A++ E+LR++P A + + Y D R++KAME
Sbjct: 299 AIVYALQQRYDEALEENREVLRRNPKHANAAYNIGTIYHRMD--------RMDKAMEWYD 350
Query: 250 KEKKKSD--LRDFKLLIAQIKVMESKHSEALRVY 281
K KK D D AQI M+ HS+A Y
Sbjct: 351 KITKKIDPLYEDAYYNRAQIYSMQGDHSKAYSDY 384
>gi|406982607|gb|EKE03902.1| TPR Domain containing protein [uncultured bacterium]
Length = 666
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E ++AA P+D A L + +L +A+ + + L+P++ + A+ A
Sbjct: 292 EAYIAALPDDHAAHYNLAVLYQNKNQLDKAIAGLQTALGLKPDDINIKQELARSYHLAKN 351
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
E AI + E+L+ E Y+ + +AY SDKK ++ + EK++ + KSD
Sbjct: 352 YEKAIGLYSEVLQSKKDDPELYYNIALAYH-SDKKYDQAIENYEKSILLKDNKNVKSDFA 410
Query: 259 DFKLLIAQIK--VMESKHSEALRVYEELVKEEPRDF 292
K L A+ + ++ EAL +Y + ++ P DF
Sbjct: 411 --KALTAKGNELSINKQYDEALVLYNKALENNPDDF 444
>gi|330509117|ref|YP_004385545.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929925|gb|AEB69727.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 282
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 23/182 (12%)
Query: 139 EQHLAANPNDIEALQT-------LMEVRIKSQKLVEAVDVIDRLIELEP-NEFEWQLLKA 190
E LA NP DIEALQT L +Q L +A+DV D+ I+ P N W LKA
Sbjct: 95 ETKLAKNPQDIEALQTSAMALASLGNREESNQFLKKAIDVYDQEIKDNPKNATAW-FLKA 153
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLR-VEAY---HGLVMAYDGSDKKLNEVEKRIEKAME 246
+ S SE AI +++++ + + ++A +++ ++ ++ ++K I+ E
Sbjct: 154 GLISILNGSEEAISAYDKVIELNGSKMIDALITKGNILLNLGRYNESIDTIDKAIQLDPE 213
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
+K+ + +L K++E+L YE + K EP +L +G + L
Sbjct: 214 NPSVWYEKATY--YNVL--------GKYNESLDAYEMITKLEPEKASAWLFKGNVLKALG 263
Query: 307 KK 308
++
Sbjct: 264 RQ 265
>gi|332840993|ref|XP_001147729.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 4
[Pan troglodytes]
Length = 833
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P +IE ++ L I +Q +A+ +R ++P + +WQL+ A +G S+ A+
Sbjct: 626 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNSQKALDT 685
Query: 206 FEEILRKDPLRVEAYHGLV 224
+++ RK P VE LV
Sbjct: 686 YKDTHRKFPENVECLRFLV 704
>gi|376002852|ref|ZP_09780673.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
gi|375328758|emb|CCE16426.1| Ser/thr protein kinase [Arthrospira sp. PCC 8005]
Length = 790
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 78/153 (50%), Gaps = 6/153 (3%)
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN 235
+EL+P+ + K + GE + A+ E+ + DP A+HG +A G ++ +
Sbjct: 441 LELDPDNSDVLTSKGTLLYQMGEPQKALDAHEQAIAIDPNNARAWHGKGIALIGL-QRYD 499
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIA-QIKVMESK--HSEALRVYEELVKEEPRDF 292
E E+A + + S + L + Q K+ E+ +SEAL Y+++++E+PR
Sbjct: 500 EAVSAFEQA--KTIRPSAPSVWQSKALALEYQGKMAEAAQVYSEALATYDDILREQPRRA 557
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
++ +G + + L + ++A + ++K + P++
Sbjct: 558 EIWVERGSVLSKLGRHEQALESYQKALEINPQH 590
>gi|383115959|ref|ZP_09936712.1| hypothetical protein BSHG_3001 [Bacteroides sp. 3_2_5]
gi|251945131|gb|EES85569.1| hypothetical protein BSHG_3001 [Bacteroides sp. 3_2_5]
Length = 920
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y ++E+ +EQ +A P ++ L L+ V I + + + + IDR++ ++PN + +KA
Sbjct: 185 YADQERVLEQAIAKYPVSLDFLYNLVNVHIATNNMEKLIGAIDRILAVDPNNDKVLPIKA 244
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA-YDGSDKKLNE---VEKRIEKAME 246
++ G++ A+ ++ + P E G+ A ++ + + +N + E A+
Sbjct: 245 RILERQGKNVEALDIYKRLYALHPESFELMTGVARANFNCATEIVNNGATIANDTEYALV 304
Query: 247 RCKKEKKKSDLRDFKLLIAQ 266
R + D +D L I Q
Sbjct: 305 RQRASGYLMDAKDLFLKILQ 324
>gi|403272067|ref|XP_003927911.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Saimiri boliviensis boliviensis]
Length = 915
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A + +GE + A
Sbjct: 595 NNADLWYNLAIVFIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FEK
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFEKILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|53714922|ref|YP_100914.1| hypothetical protein BF3637 [Bacteroides fragilis YCH46]
gi|60682900|ref|YP_213044.1| hypothetical protein BF3439 [Bacteroides fragilis NCTC 9343]
gi|265766775|ref|ZP_06094604.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|336410746|ref|ZP_08591220.1| hypothetical protein HMPREF1018_03237 [Bacteroides sp. 2_1_56FAA]
gi|423251466|ref|ZP_17232479.1| hypothetical protein HMPREF1066_03489 [Bacteroides fragilis
CL03T00C08]
gi|423254790|ref|ZP_17235720.1| hypothetical protein HMPREF1067_02364 [Bacteroides fragilis
CL03T12C07]
gi|423260246|ref|ZP_17241168.1| hypothetical protein HMPREF1055_03445 [Bacteroides fragilis
CL07T00C01]
gi|423266380|ref|ZP_17245382.1| hypothetical protein HMPREF1056_03069 [Bacteroides fragilis
CL07T12C05]
gi|423270516|ref|ZP_17249487.1| hypothetical protein HMPREF1079_02569 [Bacteroides fragilis
CL05T00C42]
gi|423275252|ref|ZP_17254197.1| hypothetical protein HMPREF1080_02850 [Bacteroides fragilis
CL05T12C13]
gi|423285340|ref|ZP_17264222.1| hypothetical protein HMPREF1204_03760 [Bacteroides fragilis HMW
615]
gi|52217787|dbj|BAD50380.1| hypothetical protein [Bacteroides fragilis YCH46]
gi|60494334|emb|CAH09130.1| putative membrane protein [Bacteroides fragilis NCTC 9343]
gi|263253152|gb|EEZ24628.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|335943959|gb|EGN05787.1| hypothetical protein HMPREF1018_03237 [Bacteroides sp. 2_1_56FAA]
gi|387775392|gb|EIK37499.1| hypothetical protein HMPREF1055_03445 [Bacteroides fragilis
CL07T00C01]
gi|392650784|gb|EIY44451.1| hypothetical protein HMPREF1066_03489 [Bacteroides fragilis
CL03T00C08]
gi|392653356|gb|EIY47012.1| hypothetical protein HMPREF1067_02364 [Bacteroides fragilis
CL03T12C07]
gi|392698440|gb|EIY91622.1| hypothetical protein HMPREF1079_02569 [Bacteroides fragilis
CL05T00C42]
gi|392700957|gb|EIY94118.1| hypothetical protein HMPREF1056_03069 [Bacteroides fragilis
CL07T12C05]
gi|392702733|gb|EIY95878.1| hypothetical protein HMPREF1080_02850 [Bacteroides fragilis
CL05T12C13]
gi|404578855|gb|EKA83573.1| hypothetical protein HMPREF1204_03760 [Bacteroides fragilis HMW
615]
Length = 920
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y ++E+ +EQ +A P ++ L L+ V I + + + + IDR++ ++PN + +KA
Sbjct: 185 YADQERVLEQAIAKYPVSLDFLYNLVNVHIATNNMEKLIGAIDRILAVDPNNDKVLPIKA 244
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA-YDGSDKKLNE---VEKRIEKAME 246
++ G++ A+ ++ + P E G+ A ++ + + +N + E A+
Sbjct: 245 RILERQGKNVEALDIYKRLYALHPESFELMTGVARANFNCATEIVNNGATIANDTEYALV 304
Query: 247 RCKKEKKKSDLRDFKLLIAQ 266
R + D +D L I Q
Sbjct: 305 RQRASGYLMDAKDLFLKILQ 324
>gi|299135312|ref|ZP_07028503.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
gi|298590289|gb|EFI50493.1| Tetratricopeptide TPR_2 repeat protein [Afipia sp. 1NLS2]
Length = 700
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E K + L +P+ I+A T + + EA+ V DRL+ +P + L +A
Sbjct: 91 YSEAIKVTDDALKIDPSSIDAQLTRGNALRRLCRFDEALAVYDRLLSADPQSEDAALGRA 150
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
+ A + A FE +L ++P A+ GL A S K E ++A+E
Sbjct: 151 TALAQAQRFDEAFPIFERLLSQNPKLASAWAGLGNALVSSHKSYAEAVSAFDRAIE 206
>gi|425451529|ref|ZP_18831350.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
gi|389767119|emb|CCI07396.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 7941]
Length = 707
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +D+L+ + N+ + K
Sbjct: 418 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKKGW 477
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G+ +LN++ +E + +
Sbjct: 478 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQF 532
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q K+ ++SEAL + + K ++ +L QG + L + E
Sbjct: 533 NPQFSQAYYSQGIILQ-KL--GRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQE 589
Query: 311 AEKQFEKFRRLVPR 324
A +EK RR+ R
Sbjct: 590 AIASYEKARRISSR 603
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ--LLKAQVQSYAG 197
Q L NP+ +EALQ + + ++ EA++ ++ I++ P+ WQ L + +
Sbjct: 357 QALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDS-AWQAWLGRGEALDKLD 415
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGL------VMAYDGSDKKLNEVEK-RIEKAMERCKK 250
+++ A++ FE +L +P +A+ G + Y + K L+++ + A KK
Sbjct: 416 KNQEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALDKLLTFQQNDAKIWYKK 475
Query: 251 EKKKSDLRDFKLLIA---QIKVMES-----------------KHSEALRVYEELVKEEPR 290
+L D++ + Q +ES K + AL Y + + P+
Sbjct: 476 GWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNPQ 535
Query: 291 DFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+ Y QGII L + EA E F + N Y + +++
Sbjct: 536 FSQAYYSQGIILQKLGRNSEA---LEAFTQATKANSNYYQAWLN 576
>gi|394990127|ref|ZP_10382959.1| hypothetical protein SCD_02553 [Sulfuricella denitrificans skB26]
gi|393790392|dbj|GAB72598.1| hypothetical protein SCD_02553 [Sulfuricella denitrificans skB26]
Length = 924
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 119 TKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL 178
K ++ +E VS+ +EQ ANP+ ++ + L E + + +A+++
Sbjct: 550 VKLASNKKEAVSW------LEQAARANPSALQPRRLLAEHYLGINEAQKALNLAREAQTA 603
Query: 179 EPNEFEWQLLKAQVQSYAGESEAAIKGFEEILR---KDPLRVEAYHGLVMAYDGSDKKLN 235
P++ + L Q AGE+E A+ ++++ R K PL H + + + K L+
Sbjct: 604 NPDDPDALDLLGATQLAAGETENALTSYQKLARLAPKSPLA----HFKLASVQATAKNLD 659
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
+ + +A+E K D + + + +++ K ++AL++ +++ ++ P+ +
Sbjct: 660 AAKASLNQALEL------KPDFLEAQAALISLELRSGKPADALKIAQQVQQQNPKMSAGF 713
Query: 296 LCQGIIYTLLRKKDEAEKQFEK 317
+ +G I+ ++ D+A K +EK
Sbjct: 714 VFEGDIHIDQKQYDQAAKSYEK 735
>gi|328954592|ref|YP_004371926.1| hypothetical protein Desac_2946 [Desulfobacca acetoxidans DSM
11109]
gi|328454916|gb|AEB10745.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 668
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 80/191 (41%), Gaps = 13/191 (6%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
+I+ L NP + +A +++K K+ +A+ R +EL P + + + +
Sbjct: 439 KIQNALKINPKNADAYYQRGGLQLKRGKIDDAIADFSRSLELRPKFVKAYVDRGTAWAKK 498
Query: 197 GESEAAIKGFEEILRKDPLRVEAYH---GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
G+ + A+ L DP VE+ + G+ D+ L+++ + ++ K
Sbjct: 499 GQFDQALVDLNRALDLDPDSVESLNNRGGIYARQSMYDRALSDLNRALDLNPNYAKAYYN 558
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+ AQ+ +A+ E+ V +P+D Y +G+IY ++ D A
Sbjct: 559 R----------AQVYYFTGHLQQAVADLEKAVSLDPKDADAYYNRGLIYDKRKQYDLAIA 608
Query: 314 QFEKFRRLVPR 324
F + L PR
Sbjct: 609 DFNQALALNPR 619
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 61/157 (38%), Gaps = 41/157 (26%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
AV ++I PN E + + + G+ E AI F +LR DP R +AY
Sbjct: 280 AVSEFSQVINAHPNFPEAYFNRGMIYALKGQDELAIADFNAVLRIDPNRGDAY------- 332
Query: 228 DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
+ + M + ++ + + L DF + AL+
Sbjct: 333 -------------VNRGMAQVRRGRLEKALADF--------------NRALQF------- 358
Query: 288 EPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
P D + Y +G +Y +L K +A + F+K + L R
Sbjct: 359 NPSDAQIYRARGNVYDMLHKTQQAREDFQKAKELSGR 395
>gi|375359683|ref|YP_005112455.1| hypothetical protein BF638R_3461 [Bacteroides fragilis 638R]
gi|301164364|emb|CBW23922.1| putative membrane protein [Bacteroides fragilis 638R]
Length = 920
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y ++E+ +EQ +A P ++ L L+ V I + + + + IDR++ ++PN + +KA
Sbjct: 185 YADQERVLEQAIAKYPVSLDFLYNLVNVHIATNNMEKLIGAIDRILAVDPNNDKVLPIKA 244
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA-YDGSDKKLNE---VEKRIEKAME 246
++ G++ A+ ++ + P E G+ A ++ + + +N + E A+
Sbjct: 245 RILERQGKNVEALDIYKRLYALHPESFELMTGVARANFNCATEIVNNGATIANDTEYALV 304
Query: 247 RCKKEKKKSDLRDFKLLIAQ 266
R + D +D L I Q
Sbjct: 305 RQRASGYLMDAKDLFLKILQ 324
>gi|284106837|ref|ZP_06386280.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
gi|283830016|gb|EFC34292.1| TPR repeat-containing protein [Candidatus Poribacteria sp. WGA-A3]
Length = 351
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 16/194 (8%)
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
+K +E H PN A L V + L A V+ + IE+ P + QL A
Sbjct: 91 KKAVELH----PNFARAYFDLGLVYQHQKNLDAAATVLKKAIEIYPRFADAQLNLAFAYD 146
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
G+ E AI ++ L+ DP ++ A L YD ++ ++AM+ + +
Sbjct: 147 QLGDREQAISAYQAALKMDPSQLTALFNLATLYD--------MQGDTDQAMKELQTLTSQ 198
Query: 255 SDLRDFK--LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
D +D K LL+AQ+ +A+ YE+ + P + G + + +A
Sbjct: 199 -DPQDAKAWLLLAQLAEKSLSEKQAIEAYEKALGISPDLLEAHYALGYLMQAQDQPQQAV 257
Query: 313 KQFEKFRRLVPRNH 326
F++ RL P NH
Sbjct: 258 NHFQEVVRLNP-NH 270
>gi|223935814|ref|ZP_03627729.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
gi|223895415|gb|EEF61861.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
Length = 893
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 129 VSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL 188
+ Y + + L A PND +AL I+ + A+ +++L+ L+ N + +L
Sbjct: 753 LHYSNALAAVNKALDAAPNDPDALFFKGISLIQLKDYDGAIPPLNQLLNLQTNNYSAKLN 812
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV-MAYDGSDK 232
+A ++G+ AA K +E I P +AY+GL +AY DK
Sbjct: 813 RAIAYLHSGDLSAARKDYESITSVAPKVYQAYYGLAEIAYRNKDK 857
>gi|114648905|ref|XP_509562.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 9
[Pan troglodytes]
Length = 824
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P +IE ++ L I +Q +A+ +R ++P + +WQL+ A +G S+ A+
Sbjct: 617 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNSQKALDT 676
Query: 206 FEEILRKDPLRVEAYHGLV 224
+++ RK P VE LV
Sbjct: 677 YKDTHRKFPENVECLRFLV 695
>gi|442321562|ref|YP_007361583.1| hypothetical protein MYSTI_04607 [Myxococcus stipitatus DSM 14675]
gi|441489204|gb|AGC45899.1| hypothetical protein MYSTI_04607 [Myxococcus stipitatus DSM 14675]
Length = 460
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 83/204 (40%), Gaps = 19/204 (9%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
E+ +A +P+ E L R++S++ AV+ + R L P+ W+L A+ G
Sbjct: 130 FERAIALSPDTAEYHYRLGVARLESEQYAAAVEPLRRATTLAPDRPSWRLPLAKALHRTG 189
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK------- 250
+S A++ ++R P + + +D + K E +E +
Sbjct: 190 DSPGAVEALGVVVRGRPSPADVATARALMEQVND-PFGGIPKAAEAKLEEGLRYLNDLDA 248
Query: 251 --------EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL---VKEEPRDFRPYLCQG 299
E+ D D +L + + + + +A R +E ++ PRD + +L G
Sbjct: 249 PQHAILAFEEVLHDYPDLSVLHSLLGLAYQRLDDAGRAVDEFKQAIERAPRDGKNHLYLG 308
Query: 300 IIYTLLRKKDEAEKQFEKFRRLVP 323
+Y ++ D A FEK L P
Sbjct: 309 ELYASRQRPDAARAAFEKAVELHP 332
>gi|88602724|ref|YP_502902.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88188186|gb|ABD41183.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 1067
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE + Q + P+D++ L + IKS +L+ A+ +D++IE P E LKA
Sbjct: 862 YESASAALSQAILYRPDDMDLLFRYAQSLIKSGELLTAIPPLDQVIEQNPENAEAWKLKA 921
Query: 191 QVQSYAGESEAAIKGFEEILRKDP 214
+++ G + A + EE LR+ P
Sbjct: 922 EIEQTLGREDEAAQAVEEALRQIP 945
>gi|348583351|ref|XP_003477436.1| PREDICTED: intraflagellar transport protein 88 homolog [Cavia
porcellus]
Length = 825
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 618 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
+++I RK P + LV +D L EV++ + K ++R +K K+
Sbjct: 678 YKDIHRKFPENADCLRFLVRL--CTDIGLKEVQEYVTK-LKRLEKMKE 722
>gi|255349073|ref|ZP_05381080.1| tetratricopeptide repeat protein [Chlamydia trachomatis 70]
gi|255503611|ref|ZP_05382001.1| tetratricopeptide repeat protein [Chlamydia trachomatis 70s]
gi|255507290|ref|ZP_05382929.1| tetratricopeptide repeat protein [Chlamydia trachomatis D(s)2923]
gi|385242072|ref|YP_005809912.1| hypothetical protein E11023_03600 [Chlamydia trachomatis E/11023]
gi|385245681|ref|YP_005814504.1| hypothetical protein E150_03630 [Chlamydia trachomatis E/150]
gi|386263039|ref|YP_005816318.1| hypothetical protein SW2_6951 [Chlamydia trachomatis Sweden2]
gi|389858378|ref|YP_006360620.1| hypothetical protein FSW4_6951 [Chlamydia trachomatis F/SW4]
gi|389859254|ref|YP_006361495.1| hypothetical protein ESW3_6951 [Chlamydia trachomatis E/SW3]
gi|389860130|ref|YP_006362370.1| hypothetical protein FSW5_6951 [Chlamydia trachomatis F/SW5]
gi|289525727|emb|CBJ15208.1| tetratricopeptide repeat protein [Chlamydia trachomatis Sweden2]
gi|296435297|gb|ADH17475.1| tetratricopeptide repeat protein [Chlamydia trachomatis E/150]
gi|296439015|gb|ADH21168.1| tetratricopeptide repeat protein [Chlamydia trachomatis E/11023]
gi|380249450|emb|CCE14746.1| tetratricopeptide repeat protein [Chlamydia trachomatis F/SW5]
gi|380250325|emb|CCE13857.1| tetratricopeptide repeat protein [Chlamydia trachomatis F/SW4]
gi|380251203|emb|CCE12968.1| tetratricopeptide repeat protein [Chlamydia trachomatis E/SW3]
gi|407651107|gb|AFU23866.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|407651111|gb|AFU23869.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|440527395|emb|CCP52879.1| lipoprotein NlpI [Chlamydia trachomatis D/SotonD1]
gi|440530068|emb|CCP55552.1| lipoprotein NlpI [Chlamydia trachomatis E/SotonE4]
gi|440530967|emb|CCP56451.1| lipoprotein NlpI [Chlamydia trachomatis E/SotonE8]
gi|440531859|emb|CCP57369.1| lipoprotein NlpI [Chlamydia trachomatis F/SotonF3]
gi|440535435|emb|CCP60945.1| lipoprotein NlpI [Chlamydia trachomatis E/Bour]
Length = 335
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P DIE L +L + + EA+ DR+ +L+P + KA V S + E AI
Sbjct: 107 HPEDIECLFSLGSAYHRLLRYEEAIACFDRITQLDPWNPQGLYNKAVVLSDMEDEEGAID 166
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
E ++++PL +A+ L G N++ R +A ER + + DL D +
Sbjct: 167 LLESTVKRNPLYWKAWVKL-----GYLLSRNKIWDRATEAYERVV--QLRPDLSDGHYNL 219
Query: 265 AQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL- 321
+ K AL+ ++E L+ E D Y+ G+ + L++ ++A F +R L
Sbjct: 220 GLCYLTLDKTRLALKAFQESLLLNAEDADAHFYI--GLAHMDLKQNEQAYDAF--YRALG 275
Query: 322 VPRNHPYREYFVDNMVATKIFGEKVDRE 349
+ +H Y + + + EK ++E
Sbjct: 276 INLDHERSHYLLGYLHHMQGESEKAEKE 303
>gi|424664690|ref|ZP_18101726.1| hypothetical protein HMPREF1205_00565 [Bacteroides fragilis HMW
616]
gi|404575223|gb|EKA79966.1| hypothetical protein HMPREF1205_00565 [Bacteroides fragilis HMW
616]
Length = 921
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y ++E+ +EQ +A P ++ L L+ V I + + + + IDR++ ++PN + +KA
Sbjct: 185 YADQERVLEQAIAKYPVSLDFLYNLVNVHIATNNMEKLIGAIDRILAVDPNNDKVLPIKA 244
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA-YDGSDKKLNE---VEKRIEKAME 246
++ G++ A+ ++ + P E G+ A ++ + + +N + E A+
Sbjct: 245 RILERQGKNVEALDIYKRLYALHPESFELMTGVARANFNCATEIVNNGATIANDTEYALV 304
Query: 247 RCKKEKKKSDLRDFKLLIAQ 266
R + D +D L I Q
Sbjct: 305 RQRASGYLMDAKDLFLKILQ 324
>gi|332840996|ref|XP_003314116.1| PREDICTED: intraflagellar transport protein 88 homolog [Pan
troglodytes]
Length = 805
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P +IE ++ L I +Q +A+ +R ++P + +WQL+ A +G S+ A+
Sbjct: 598 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNSQKALDT 657
Query: 206 FEEILRKDPLRVEAYHGLV 224
+++ RK P VE LV
Sbjct: 658 YKDTHRKFPENVECLRFLV 676
>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
Length = 1129
Score = 41.6 bits (96), Expect = 0.63, Method: Composition-based stats.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 22/219 (10%)
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
++ D A E ++Y +Q L N D EALQ + EAV + L+E
Sbjct: 719 TSSDLGRAEEAIAY------YDQLLKLNSTDSEALQGKSLALASLGRYDEAVACFNPLLE 772
Query: 178 LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKK--LN 235
LEP E +A + +G EAA++ ++ I++ DP +A S+K L
Sbjct: 773 LEPENVEALEGRAFALARSGRPEAALEDYDVIMKLDPTNSKAL---------SEKASLLE 823
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES--KHSEALRVYEELVKEEPRDFR 293
E+ + E A + + + R+ ++ Q K +E+ A+ Y++++ +P++
Sbjct: 824 ELGRYDEAASTYGEILEITPENRE--IMYRQGKALEAMGDFEAAIACYDKILALDPKNID 881
Query: 294 PYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYF 332
+G + + K EA ++K P N P YF
Sbjct: 882 AINNKGFALSKMEKYQEALATYDKALEYDPDN-PAAWYF 919
>gi|456352086|dbj|BAM86531.1| putative peptidase, caspase-like domain and TPR repeats [Agromonas
oligotrophica S58]
Length = 526
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K + +AANP+D+ AL +V A+ D I + P + E + ++
Sbjct: 368 KSLTAKIAANPDDVSALYRRGQVYASKGAYALAIKDFDDTIRINPKDVEALNNRCWARTV 427
Query: 196 AGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKK 233
AGE +AA++ E LR P V+A GLV G+ K
Sbjct: 428 AGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGATKN 467
>gi|374386203|ref|ZP_09643703.1| hypothetical protein HMPREF9449_02089 [Odoribacter laneus YIT
12061]
gi|373224132|gb|EHP46472.1| hypothetical protein HMPREF9449_02089 [Odoribacter laneus YIT
12061]
Length = 316
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
+ E L L I+ + EA++ R+ L+ E + L +AQ+ ++EAAI E
Sbjct: 59 EFETLNYLALAYIQQGDVSEAIEAYSRMTLLDSEETDTFLNRAQLYLQENQAEAAIADCE 118
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE---KAMERCKKEKKKSDLRDFKLLI 264
IL K A+ + AY K LN E I+ KA+E K+D+ D LL
Sbjct: 119 YILTKKSTDYRAHFLIGQAY----KMLNRPEAAIDSLSKAIE------IKNDMADIFLLR 168
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ + ++ +AL+ ++ P + Y+ +G IY L+ A + + L P
Sbjct: 169 SGLLTELKQYDQALQDVNTAIRLAPEEENAYMQRGAIYEALKDTPSARQDYTTVVELNP 227
>gi|88602105|ref|YP_502283.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88187567|gb|ABD40564.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 452
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 118 STKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIE 177
S +DT + ++ E+ KE + L+ NP ++ ALQ + +K EA++ ++ ++
Sbjct: 18 SGEDTNQTVDTITLEDLIKENDYVLSLNPQNLTALQYRALIYYNEEKYPEAINTSEQCLK 77
Query: 178 LEPN-EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
++P F W ++ + Y + + A++ F+ ++ +P
Sbjct: 78 IDPTCSFAWHIIGSS-WGYLNQPDKAVEAFQNVVTLNP 114
>gi|386813638|ref|ZP_10100862.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403135|dbj|GAB63743.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 405
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
KE+ + L NP + ++++ +K EA+ ++ +E++P+ E + +A V +
Sbjct: 217 KELNKTLEVNPKYSNSYVIFGLIKLREKKFDEAIAQYNKAMEIDPDNLEARYQRAIVFAL 276
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
+ A+ +IL K+P A + + + Y +D R++KAME K KK
Sbjct: 277 QERYDDALAENMKILEKNPKHASAAYNIGVIYHRTD--------RLDKAMEWYDKVAKKI 328
Query: 256 D--LRDFKLLIAQIKVMESKHSEALRVY 281
D D Q+ M+ HS+A Y
Sbjct: 329 DPLYEDAYYTRGQLYSMKGDHSKAYSDY 356
>gi|295087701|emb|CBK69224.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
Length = 571
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IE+ P + +Q A V G E AI+ + IL+ DP
Sbjct: 468 QAALKARQFQRALDDIVKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILDNILKADPKY 527
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 528 AEAY-----------RLLGLCQIQLKKTDEACGNFKKAKELGD 559
>gi|334118012|ref|ZP_08492102.1| serine/threonine protein kinase with TPR repeats [Microcoleus
vaginatus FGP-2]
gi|333459997|gb|EGK88607.1| serine/threonine protein kinase with TPR repeats [Microcoleus
vaginatus FGP-2]
Length = 699
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 107/255 (41%), Gaps = 29/255 (11%)
Query: 98 IKPAIAAPVAAAATVESTNEST-KDTTSAREDVS-YEEKEKEIEQHLAANPNDIEALQTL 155
I +I A + T S N + + + ++S +EE E+ + P+ E Q
Sbjct: 315 IGISIIASIYGVNTFNSANATDLYNRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEK 374
Query: 156 MEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPL 215
+ K +K E+ D+ IEL+P E + +S+ AI F+ L+ P
Sbjct: 375 AKTLYKLKKYHESQSAYDKAIELKPEYLEAWTGRGYALDKLQQSQEAIASFDNALKIQPD 434
Query: 216 RVEAYHG---LVMAYDGSDKKLNEVEKRIE-------------KAMERCKKEKK------ 253
A+ G +++ ++ + EK +E +A ++ K+ +
Sbjct: 435 YATAWEGRGDVLLDSQRYEEAIASYEKAVEFQSNLYRAWYNRGQAYQKLKQYDRAVESYQ 494
Query: 254 -----KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
K D + + + + +K+ EA YE+ V+ +P+ ++ + +GI +R+
Sbjct: 495 KAVEIKFDNYEAWYNLGNVFLEVNKNQEAFEAYEKAVRFQPKFYQSWYSKGIALLKMRRH 554
Query: 309 DEAEKQFEKFRRLVP 323
+EA + +EK +L P
Sbjct: 555 EEAVEAYEKAVKLKP 569
>gi|189184738|ref|YP_001938523.1| TPR repeat-containing protein 01_10 [Orientia tsutsugamushi str.
Ikeda]
gi|189181509|dbj|BAG41289.1| TPR repeat-containing protein 01_10 [Orientia tsutsugamushi str.
Ikeda]
Length = 379
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLV 224
EA++ D I+ PN E K + G+ + AI+ F+ ++ DP ++AY+ G V
Sbjct: 194 EAIESCDIAIKYRPNYSEAYHNKGLTLAILGQFQNAIEHFDLAIKYDPNDLKAYNNKGYV 253
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALRVYEE 283
+ + KR +AME C + + D L + KH EA++ Y+
Sbjct: 254 L----------NLLKRYAEAMESCNLAIEIDPNCADAYCLKGMVFEKLGKHQEAIKNYDI 303
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+K P + YL +GI L + A++ F
Sbjct: 304 AIKYNPNFDKNYLEKGISLVNLGQYSSAKENF 335
>gi|20090792|ref|NP_616867.1| hypothetical protein MA1943 [Methanosarcina acetivorans C2A]
gi|19915855|gb|AAM05347.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 429
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 96/221 (43%), Gaps = 29/221 (13%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP-NEFEWQLLK 189
Y++ K E+ L P + L V ++ + +A+ V DRL+EL+P N+ W LK
Sbjct: 88 YKDSLKAYEKALGIEPENPAYLYEKGFVLLQLNREEDALQVFDRLLELKPDNDKAWN-LK 146
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVM-----------AYDGSDKKLNE 236
V G+ E A++ E+ L +P A+H G V+ AYD + K +
Sbjct: 147 TSVLCRLGQHEKALEASEKALTSNPKLAGAWHAKGTVLADLGRYEESIRAYDSALKINPK 206
Query: 237 VEKRIE-KAMERCKKEKKKSDL--RDFKLLI-----------AQIKVMESKHSEALRVYE 282
+ + E KA C ++ + D L I A + + K+ +AL
Sbjct: 207 LARAWEGKAFALCSLDRPVEAIIAYDSALQINPDNAKTWVGKALVHLKLGKYKKALEPCN 266
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ + +P + C+G+I L K DEA FE+ R+ P
Sbjct: 267 KAISIKPDLAEAWYCKGMILAGLEKDDEALGAFERALRIRP 307
>gi|170747494|ref|YP_001753754.1| hypothetical protein Mrad2831_1062 [Methylobacterium radiotolerans
JCM 2831]
gi|170654016|gb|ACB23071.1| TPR repeat-containing protein [Methylobacterium radiotolerans JCM
2831]
Length = 290
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 32/233 (13%)
Query: 120 KDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELE 179
KDTT A +V+ + +++ NPND A T ++ + +A+ + I+L+
Sbjct: 44 KDTTGA-TNVNIASLTEVVQR----NPNDAAAYNTRGAAYARAGQFNDAIADFTKAIQLD 98
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG---LVMAYDGSDKKLNE 236
PN +A G A++ F + + DP AY G + A D+ LN+
Sbjct: 99 PNSASAYNNRALANRQIGRDGPALQDFSKAIGIDPNYGPAYIGRANVERAQGNLDQALND 158
Query: 237 VEKRIEKAMERCK--------KEKKKSD---LRDFKLLI-------------AQIKVMES 272
+ I + E + K+K+ D + DF I Q + +
Sbjct: 159 LNVAIRLSPESAQAYHARGLVKQKQGQDTQAIADFDAAIDRDPFVAAPYAARGQSLIATN 218
Query: 273 KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
++++A+ Y + +D + +G+ Y ++ EA + +++ + P N
Sbjct: 219 QYAKAIEDYNAALNVNAKDATSWAYRGLAYEKQGQRKEAMENYQRASTIDPNN 271
>gi|407408643|gb|EKF32001.1| intraflagellar transport protein IFT88, putative [Trypanosoma cruzi
marinkellei]
Length = 846
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
+++ + L +K++ +AV +R +++P E +WQL+ A G+ A + +E
Sbjct: 674 NMDVISWLGAYFVKNEIYDKAVQFFERASQIQPLEVKWQLMVASCHRRRGDYMQAKRLYE 733
Query: 208 EILRKDPLRVEAYHGLV-MAYD-GSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
+ RK P +E LV + D G ++ NE K+I+K +R ++E + RD
Sbjct: 734 AVYRKYPENMECLRYLVHLCKDAGLIEEANEWFKKIKKLEQRQQEETDEGGYRD 787
>gi|255544492|ref|XP_002513307.1| conserved hypothetical protein [Ricinus communis]
gi|223547215|gb|EEF48710.1| conserved hypothetical protein [Ricinus communis]
Length = 348
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 124 SAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF 183
S E + + + K+ E LA +P D AL+ + + +A ++ L + +P +
Sbjct: 127 SEEEKATLQTQLKQYEATLAVSPKDPTALEGAAVTLAELGEYTQAASLLQDLAKEKPTDT 186
Query: 184 E-WQLL---KAQVQSYAGESEA--------------AIKGFEEILRKDPLRVEAYHGLVM 225
+ +LL K +++ Y G + A ++GF L EA L+
Sbjct: 187 DVLRLLGEVKYELKDYEGSAAAYRISSMVSKNVNFEVLRGFTNALLAANKPDEAVQVLLA 246
Query: 226 AYDG-SDKKLNEVE-KRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEE 283
+ + + KK +V+ K AME E +K D LL+ + S+A+ VY++
Sbjct: 247 SRERLNSKKSGDVDVKGDTNAME---TESQKVDPIQVDLLLGKAYSDWGHVSDAVSVYDQ 303
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFR 319
L+ P DFR YL +GII +AE+ F + +
Sbjct: 304 LISSHPNDFRGYLAKGIILKENGNVGDAERMFIQLK 339
>gi|336405003|ref|ZP_08585688.1| hypothetical protein HMPREF0127_03001 [Bacteroides sp. 1_1_30]
gi|335939356|gb|EGN01231.1| hypothetical protein HMPREF0127_03001 [Bacteroides sp. 1_1_30]
Length = 568
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IE+ P + +Q A V G E AI+ + IL+ DP
Sbjct: 465 QAALKARQFQRALDDIVKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILDNILKADPKY 524
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 525 AEAY-----------RLLGLCQIQLKKTDEACGNFKKAKELGD 556
>gi|337286226|ref|YP_004625699.1| hypothetical protein Thein_0858 [Thermodesulfatator indicus DSM
15286]
gi|335359054|gb|AEH44735.1| Tetratricopeptide TPR_1 repeat-containing protein
[Thermodesulfatator indicus DSM 15286]
Length = 756
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 105/217 (48%), Gaps = 16/217 (7%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E+ L P+ ++ L + ++ KL EA ++D ++ PN L++ +++ G
Sbjct: 289 EESLKKWPDSLDLKAQLAYLLVQKNKLDEAQKLVDEVLAKNPNHPIAHLVRGKIRLAKGL 348
Query: 199 SEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
A++ FE ++ P EAYH G+V G K E K +EKA+E K+
Sbjct: 349 LAEALEDFEITVKGRPRLAEAYHFIGVVNLLQG---KPAEARKALEKAIE-LNPLAWKTR 404
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L +LL+AQ + +++ EA++V ++ PR+ L Y +K EAEK ++
Sbjct: 405 LIYARLLLAQGEPDKARE-EAVKV----LRLMPRNKEAGLLLAASYMAEKKFAEAEKIYK 459
Query: 317 KFRRLVPRNHPYREYFVDNMVATKIFGEKVDRESMAS 353
+ ++ P++ V AT ++ +K +E++A
Sbjct: 460 RMIQIFPKDPT-----VHFAYATCLYAQKKIKEAVAQ 491
>gi|345508473|ref|ZP_08788104.1| tetratricopeptide repeat protein [Bacteroides sp. D1]
gi|229445014|gb|EEO50805.1| tetratricopeptide repeat protein [Bacteroides sp. D1]
Length = 568
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IE+ P + +Q A V G E AI+ + IL+ DP
Sbjct: 465 QAALKARQFQRALDDIVKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILDNILKADPKY 524
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 525 AEAY-----------RLLGLCQIQLKKTDEACGNFKKAKELGD 556
>gi|255690060|ref|ZP_05413735.1| tetratricopeptide repeat family protein [Bacteroides finegoldii DSM
17565]
gi|260624337|gb|EEX47208.1| tetratricopeptide repeat protein [Bacteroides finegoldii DSM 17565]
Length = 574
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IEL P + +Q A V G E A++ +IL+ DP
Sbjct: 469 QAALKARQYQRALDDIAKAIELNPADLTYQAEHAVVNLRVGRYEEAVRILNDILKTDPKY 528
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 529 AEAY-----------RLLGLCQIQLQKKDEACGNFKKAKELGD 560
>gi|333985873|ref|YP_004515083.1| hypothetical protein [Methylomonas methanica MC09]
gi|333809914|gb|AEG02584.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylomonas
methanica MC09]
Length = 1147
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 105 PVAAAATVESTNESTKDTTSAREDVSYE--------EKEKEIEQHLAANPNDIEALQTLM 156
P A + T ES D +A ++ E E+ + + A+PN+ AL+ L+
Sbjct: 430 PEVAEGYLRKTLESNPDNAAALASLARELLKRGALASAEEITRKQVQASPNNTVALEMLI 489
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+VR A + + +L +L + + A++ S G +++AIKG++ +L++ P
Sbjct: 490 QVRALRGDWKGAAEALAKLEKLPGAQSTTRYWAARLASLQGNTDSAIKGYQALLQQQPSY 549
Query: 217 VEAYHGLVMAYDGSDKKLNEVE 238
+A LV Y+ + ++ +E
Sbjct: 550 TKALTDLVQIYETNGRRRELIE 571
>gi|262408866|ref|ZP_06085411.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294810719|ref|ZP_06769367.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
1b]
gi|262353077|gb|EEZ02172.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294442052|gb|EFG10871.1| tetratricopeptide repeat protein [Bacteroides xylanisolvens SD CC
1b]
Length = 571
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IE+ P + +Q A V G E AI+ + IL+ DP
Sbjct: 468 QAALKARQFQRALDDIVKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILDNILKADPKY 527
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 528 AEAY-----------RLLGLCQIQLKKTDEACGNFKKAKELGD 559
>gi|193083915|gb|ACF09593.1| TPR-repeat protein [uncultured marine crenarchaeote KM3-34-D9]
Length = 272
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +P ++ AL L + +K +A+ +++ +++P + + G ++
Sbjct: 37 LKKDPQNVVALHNLGLALNQLKKYQDAITCFEKVADIDPKYIAAINNRGIALAELGNTDD 96
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A K +++ L +P A++ + YD KL + E+ I+ K + + +K
Sbjct: 97 AFKYYDKALEINPKYAAAHYNKGVLYD----KLLQHEEAIQSLDMALKCDSGNVNTVFYK 152
Query: 262 -LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+++ ++K KH EAL +E + ++ P+ + +GI T L K D+A + F+K +
Sbjct: 153 GIVLGKMK----KHEEALNCFENICRKHPKHLDAFFHKGIELTELGKHDKALEIFDKILQ 208
Query: 321 LVPRN 325
+ N
Sbjct: 209 IHGDN 213
>gi|148252588|ref|YP_001237173.1| hypothetical protein BBta_1011 [Bradyrhizobium sp. BTAi1]
gi|146404761|gb|ABQ33267.1| putative TPR repeat containing protein [Bradyrhizobium sp. BTAi1]
Length = 800
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E+ AA P+ + L+ ++S + +A ++ +++ P+E LL Q QS G
Sbjct: 538 LEEAHAAAPDAVRPATLLVAAYLRSGRPEKAEALLTDMLKRRPDESALLLLMGQTQSAKG 597
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
++ A F+ ++ + P AY L Y ++K NE +++ + K+ D
Sbjct: 598 RTDEAKTIFKRVITQQPKNEAAYRSLSELY-ANEKSFNEAASILKEGL------KENPDN 650
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
+ +L A + + + A+ YE ++K++P
Sbjct: 651 LNLRLSQASLSLARGDNDGAIAAYEAVLKDDP 682
>gi|124022409|ref|YP_001016716.1| hypothetical protein P9303_07001 [Prochlorococcus marinus str. MIT
9303]
gi|123962695|gb|ABM77451.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9303]
Length = 267
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 33/206 (16%)
Query: 102 IAAPVAAAATVESTNESTKDTTSARE--DVSYEEKEKEIEQHLAANPNDIEALQTLMEVR 159
IA A E N KD + D++ EE++K +E+ L N+
Sbjct: 22 IAPESRALGNREILNRQVKDLLDQQNNGDLNTEEQQKLLERLLVLGRNE----------- 70
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
EA+ I+ L+ +P + W+L+ A+++ G+ + A K +++ P +E
Sbjct: 71 -------EAMTQIELLMARQPKTWLWKLMLAELKREQGDRDGARKDINQLMTIQPHNLEV 123
Query: 220 YHGLVMAYD---GSDK-KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHS 275
L + D G +K + E++KR E K K LL+A ++ +
Sbjct: 124 LQ-LKILLDLEAGREKAAVAELKKRFE--------SKTKGKRIPIGLLLADLQRQTGQTK 174
Query: 276 EALRVYEELVKEEPRDFRPYLCQGII 301
A +Y L E P D RP L ++
Sbjct: 175 AAAALYRVLSNESPTDARPLLALALM 200
>gi|15605416|ref|NP_220202.1| TPR-motif-containing protein [Chlamydia trachomatis D/UW-3/CX]
gi|76789423|ref|YP_328509.1| TPR repeat-containing protein [Chlamydia trachomatis A/HAR-13]
gi|237805034|ref|YP_002889188.1| hypothetical protein CTB_6881 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311510|ref|ZP_05354080.1| tetratricopeptide repeat protein [Chlamydia trachomatis 6276]
gi|255317812|ref|ZP_05359058.1| tetratricopeptide repeat protein [Chlamydia trachomatis 6276s]
gi|385241146|ref|YP_005808987.1| hypothetical protein G11222_03630 [Chlamydia trachomatis G/11222]
gi|385243891|ref|YP_005811737.1| hypothetical protein CTDEC_0683 [Chlamydia trachomatis D-EC]
gi|385244771|ref|YP_005812615.1| hypothetical protein CTDLC_0683 [Chlamydia trachomatis D-LC]
gi|3329135|gb|AAC68278.1| TPR-motif protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167953|gb|AAX50961.1| tetratricopeptide repeat family protein [Chlamydia trachomatis
A/HAR-13]
gi|231273334|emb|CAX10249.1| tetratricopeptide repeat protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|296437154|gb|ADH19324.1| tetratricopeptide repeat protein [Chlamydia trachomatis G/11222]
gi|297748814|gb|ADI51360.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis
D-EC]
gi|297749694|gb|ADI52372.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis
D-LC]
gi|407651099|gb|AFU23860.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|407651103|gb|AFU23863.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|407651115|gb|AFU23872.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|407651119|gb|AFU23875.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|407651123|gb|AFU23878.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|407651127|gb|AFU23881.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|407651131|gb|AFU23884.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|440525611|emb|CCP50862.1| lipoprotein NlpI [Chlamydia trachomatis K/SotonK1]
gi|440528287|emb|CCP53771.1| lipoprotein NlpI [Chlamydia trachomatis D/SotonD5]
gi|440529178|emb|CCP54662.1| lipoprotein NlpI [Chlamydia trachomatis D/SotonD6]
gi|440533646|emb|CCP59156.1| lipoprotein NlpI [Chlamydia trachomatis Ia/SotonIa1]
gi|440534540|emb|CCP60050.1| lipoprotein NlpI [Chlamydia trachomatis Ia/SotonIa3]
Length = 335
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P DIE L +L + + EA+ DR+ +L+P + KA V S + E AI
Sbjct: 107 HPEDIECLFSLGSAYHRLLRYEEAIACFDRITQLDPWNPQGLYNKAVVLSDMEDEEGAID 166
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
E ++++PL +A+ L G N++ R +A ER + + DL D +
Sbjct: 167 LLESTVKRNPLYWKAWVKL-----GYLLSRNKIWDRATEAYERVV--QLRPDLSDGHYNL 219
Query: 265 AQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL- 321
+ K AL+ ++E L+ E D Y+ G+ + L++ ++A F +R L
Sbjct: 220 GLCYLTLDKTRLALKAFQESLLLNAEDADAHFYI--GLAHMDLKQNEQAYDAF--YRALG 275
Query: 322 VPRNHPYREYFVDNMVATKIFGEKVDRE 349
+ +H Y + + + EK ++E
Sbjct: 276 INLDHERSHYLLGYLHHMQGESEKAEKE 303
>gi|428203596|ref|YP_007082185.1| cytochrome c biogenesis factor [Pleurocapsa sp. PCC 7327]
gi|427981028|gb|AFY78628.1| cytochrome c biogenesis factor [Pleurocapsa sp. PCC 7327]
Length = 320
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
Query: 120 KDTTSAREDVSYEEKEKEIE---QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLI 176
K + R+ ++ +E+++EI+ + L NPND++A ++ K EA+ D +
Sbjct: 118 KSSQQTRDRIT-QERQQEIDRATEALRRNPNDVDAYLKRAQMYTWLGKDREALADYDCAV 176
Query: 177 ELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
L+P++ +L +A ++ +S+ AI+ ++ +LR +P ++ Y+
Sbjct: 177 SLKPDDISSRLNRASFRAKLEDSQGAIEDYDYVLRLEPHNIQTYY 221
>gi|34541764|ref|NP_906243.1| hypothetical protein PG2200 [Porphyromonas gingivalis W83]
gi|334148002|ref|YP_004510931.1| hypothetical protein PGTDC60_2228 [Porphyromonas gingivalis TDC60]
gi|419970700|ref|ZP_14486183.1| tetratricopeptide repeat protein [Porphyromonas gingivalis W50]
gi|34398082|gb|AAQ67142.1| TPR domain protein [Porphyromonas gingivalis W83]
gi|333805158|dbj|BAK26365.1| TPR domain-containing protein [Porphyromonas gingivalis TDC60]
gi|392610194|gb|EIW92977.1| tetratricopeptide repeat protein [Porphyromonas gingivalis W50]
Length = 695
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PND L L V S++ EA + + L++ P + + + ++ ++ AAI+
Sbjct: 124 PNDEGMLVNLTGVLTDSKRYAEAREGVAELLKFYPKSKQAHIALSAIELGEQDTVAAIRE 183
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKKKSDLRDFKLL 263
E+LR D L AY + M L+ KR +AM K E + S+L ++ +
Sbjct: 184 LNEVLRMDSLFAPAYSQMAM--------LHLKSKRNAEAMAALDKAIELEPSELSNY-IN 234
Query: 264 IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
I+ + A+ Y +V+++P D + ++ + L + A + F+ RL P
Sbjct: 235 RGVIRYQSNDLRGAMDDYSHVVRQKPNDKLARFNRALLRSYLGDVNNAIEDFDVVIRLEP 294
Query: 324 RNH 326
N+
Sbjct: 295 ENY 297
>gi|67620910|ref|XP_667732.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54658897|gb|EAL37506.1| hypothetical protein Chro.10070 [Cryptosporidium hominis]
Length = 2646
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 233 KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF 292
++N+V K I ++CK E K+ + L +I +SK+ + + YE+L+++ ++F
Sbjct: 1179 RINKVRKNIHNKYKKCKTELSKAKKSFYSFLKGEISKQKSKNKMSSQSYEDLLRKIQQEF 1238
Query: 293 RPYL-----CQGIIYTLLRKKD 309
+ Y CQGI+ LRK+D
Sbjct: 1239 KNYRRLEKKCQGIMVN-LRKED 1259
>gi|291239488|ref|XP_002739657.1| PREDICTED: OSMotic avoidance abnormal family member (osm-5)-like
[Saccoglossus kowalevskii]
Length = 826
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I SQ +A+ +R ++P + +WQL+ A +G + A++
Sbjct: 612 PSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVIQPTQSKWQLMIASCHRRSGNYQQALET 671
Query: 206 FEEILRKDPLRVEAYHGLV 224
++ I +K P +E LV
Sbjct: 672 YKHIHKKFPENIECLKFLV 690
>gi|145501226|ref|XP_001436595.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403736|emb|CAK69198.1| unnamed protein product [Paramecium tetraurelia]
Length = 610
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 30/176 (17%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES---------EAAIKGFEEILRKD 213
QKL +A+ +D I+ +PN LLKA Y G+S + A+ EE+L+ +
Sbjct: 398 QKLQDALIYMDSAIKSDPN-----LLKA----YTGKSLILCEMKKYDLALDCLEEVLKIN 448
Query: 214 PLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVME 271
P +AYH G + +K E ++++KA+ K L+ L +Q+K
Sbjct: 449 PNYEKAYHLRGNCLK---QQRKFQEAIQQLDKAIALDNKYVNAYTLKGNCL--SQLK--- 500
Query: 272 SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP 327
++S+AL+ Y++ ++ + + Y+ +GI+ L+K EA +Q++ R+ P N P
Sbjct: 501 -QYSKALQCYDQALQIDKQCIEVYINKGILLQDLKKFKEAIEQYDLALRIDP-NCP 554
>gi|188995930|ref|YP_001930182.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
gi|188595610|dbj|BAG34585.1| TPR domain protein [Porphyromonas gingivalis ATCC 33277]
Length = 695
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 11/183 (6%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PND L L V S++ EA + + L++ P + + + ++ ++ AAI+
Sbjct: 124 PNDEGMLVNLTGVLTDSKRYAEAREGVAELLKFYPKSKQAHIALSAIELGEQDTVAAIRE 183
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKKKSDLRDFKLL 263
E+LR D L AY + M L+ KR +AM K E + S+L ++ +
Sbjct: 184 LNEVLRMDSLFAPAYSQMAM--------LHLKSKRNAEAMAALDKAIELEPSELSNY-IN 234
Query: 264 IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
I+ + A+ Y +V+++P D + ++ + L + A + F+ RL P
Sbjct: 235 RGVIRYQSNDLRGAMDDYSHVVRQKPNDKLARFNRALLRSYLGDVNNAIEDFDVVIRLEP 294
Query: 324 RNH 326
N+
Sbjct: 295 ENY 297
>gi|427416785|ref|ZP_18906968.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
gi|425759498|gb|EKV00351.1| tetratricopeptide repeat protein [Leptolyngbya sp. PCC 7375]
Length = 957
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 48/188 (25%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
E +I++ L +A+ DR + ++PN E L +++ + + A+ ++++ DP R
Sbjct: 670 EGQIEAGNLEDAIATYDRALAIQPNNAELWLARSKPLTQLKRRDEALTALQKVIDLDPQR 729
Query: 217 VEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKH 274
EA++ GLV LR+ + ++
Sbjct: 730 KEAWYQRGLV--------------------------------LRELR-----------RY 746
Query: 275 SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+AL +E +++ D R +L +G++ + L+++ EK F + + N Y E +V+
Sbjct: 747 DDALTTFERVIELNDTDPRAWLNKGMVLSRLKQR---EKAIISFDKAIALNPTYHEAWVN 803
Query: 335 NMVATKIF 342
VA I
Sbjct: 804 RGVAYGIL 811
>gi|94263966|ref|ZP_01287768.1| TPR repeat [delta proteobacterium MLMS-1]
gi|93455638|gb|EAT05820.1| TPR repeat [delta proteobacterium MLMS-1]
Length = 218
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%)
Query: 128 DVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL 187
D Y E K EQ+L ANP + A + ++ +A+D DRL++ P + + +
Sbjct: 134 DQQYREAIKLYEQYLIANPQEHPARLKMALALAWAEDYPQAIDQFDRLVKALPEDRQLKR 193
Query: 188 LKAQVQSYAGESEAAIKGFEEIL 210
AQV S+AG++E AIK +E L
Sbjct: 194 KFAQVLSWAGQNERAIKLLQESL 216
>gi|423302458|ref|ZP_17280481.1| hypothetical protein HMPREF1057_03622 [Bacteroides finegoldii
CL09T03C10]
gi|408471549|gb|EKJ90081.1| hypothetical protein HMPREF1057_03622 [Bacteroides finegoldii
CL09T03C10]
Length = 568
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IEL P + +Q A V G E A++ +IL+ DP
Sbjct: 465 QAALKARQYQRALDDIAKAIELNPADLTYQAEHAVVNLRVGRYEEAVRILNDILKTDPKY 524
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 525 AEAY-----------RLLGLCQIQLQKKDEACGNFKKAKELGD 556
>gi|326680234|ref|XP_001922486.3| PREDICTED: LOW QUALITY PROTEIN: transmembrane and TPR
repeat-containing protein 3 [Danio rerio]
Length = 934
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE E + + + P AL L + +SQ+ ++A+ V++ L+ P + +LK
Sbjct: 687 EEAEHWMREAIHLQPGFRSALFNLALLYSQSQRELDALPVLEELLRYHPEHVKGLILKGD 746
Query: 192 V-QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERC 248
+ ++ ++ A FE IL DP V+A H L + Y E+R + ERC
Sbjct: 747 ILMNHRKDTRGAKTCFERILSMDPSNVQAKHNLCVVY---------FEERELQRAERC 795
>gi|91202455|emb|CAJ72094.1| similar to Tpr region of human peroxisomal targeting signal-1
receptor Pex5 [Candidatus Kuenenia stuttgartiensis]
Length = 312
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 16/183 (8%)
Query: 135 EKEIEQHLAA---NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+KEIE AA NPND L + K L EAVD + EL P+ E + +
Sbjct: 57 DKEIEAAKAAVEANPNDPAVYYNLAVLSDKKGMLDEAVDAYKKATELNPSSEEALVGLGK 116
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERC 248
V + +S+ AI FE+ L + EAY GL + + G D+ + + +
Sbjct: 117 VLNKKAKSDEAITAFEKALAININNAEAYEGLGLVHVHKGGPDEAIRLFNRAV------- 169
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
DL + + + + + EA+ + + +K P+ + GI YT L K
Sbjct: 170 ---AINPDLVESRYNLGILYAKNGQFEEAIAEWLKAIKINPKRTEFHYNLGIAYTKLGKL 226
Query: 309 DEA 311
++A
Sbjct: 227 EDA 229
>gi|31874611|emb|CAD98046.1| hypothetical protein [Homo sapiens]
gi|117646410|emb|CAL38672.1| hypothetical protein [synthetic construct]
Length = 914
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P V +GE + A
Sbjct: 595 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSVIVMQESGEVKLRPEAR 654
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 655 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 706
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 707 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 765
Query: 321 LVPRN 325
+ P N
Sbjct: 766 MDPSN 770
>gi|456824079|gb|EMF72516.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 304
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 169 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKW 228
Query: 318 FRRLVP 323
LVP
Sbjct: 229 ANSLVP 234
>gi|406605449|emb|CCH43093.1| Superkiller protein 3 [Wickerhamomyces ciferrii]
Length = 1390
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 12/120 (10%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
N D E+ L E +L AV V R +ELEPN + + L A V++ E + AI
Sbjct: 716 NAEDTESWIGLGEAYYGCGRLEAAVKVFKRALELEPNHWTAKYLLAVVETRINEFDTAIG 775
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR---------IEKAMERCKKEKKKS 255
FE++L P GL YD + NE R +EKA+ K K+S
Sbjct: 776 RFEDLLNTRPDEECIISGL---YDALYQYANEAITRGFFGKAIGLVEKAIALGPKGNKQS 832
>gi|150009279|ref|YP_001304022.1| hypothetical protein BDI_2681 [Parabacteroides distasonis ATCC
8503]
gi|149937703|gb|ABR44400.1| TPR-domain containing protein [Parabacteroides distasonis ATCC
8503]
Length = 321
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D E + L+ + +L +A DV++R++E+EP+ +L + + + I
Sbjct: 61 DFETMSYLVSAYTMANELGKAEDVLNRMVEMEPDHIATRLTRVNLLFMLDKDAEVITDCL 120
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
++ +P AY + A K N+V I + + K D D LL A+I
Sbjct: 121 HVIELEPSNHVAYFMMAKA----KKATNDVFGAI---ADLTRSISLKEDFADAYLLRAEI 173
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + EAL E+ ++ P + YL +G I+ L + A F++ L P N
Sbjct: 174 LLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMALGDIEAANSDFQQVLDLNPFN 231
>gi|440532752|emb|CCP58262.1| lipoprotein NlpI [Chlamydia trachomatis G/SotonG1]
Length = 335
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P DIE L +L + + EA+ DR+ +L+P + KA V S + E AI
Sbjct: 107 HPEDIECLFSLGSAYHRLLRYEEAIACFDRITQLDPWNPQGLYNKAVVLSDMEDEEGAID 166
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
E ++++PL +A+ L G N++ R +A ER + + DL D +
Sbjct: 167 LLESTVKRNPLYWKAWVKL-----GYLLSRNKIWDRATEAYERVV--QLRPDLSDGHYNL 219
Query: 265 AQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL- 321
+ K AL+ ++E L+ E D Y+ G+ + L++ ++A F +R L
Sbjct: 220 GLCYLTLDKTRLALKAFQESLLLNAEDADAHFYI--GLAHMDLKQNEQAYDAF--YRALG 275
Query: 322 VPRNHPYREYFVDNMVATKIFGEKVDRE 349
+ +H Y + + + EK ++E
Sbjct: 276 INLDHERSHYLLGYLHHMQGESEKAEKE 303
>gi|309792802|ref|ZP_07687245.1| protein kinase [Oscillochloris trichoides DG-6]
gi|308225166|gb|EFO78951.1| protein kinase [Oscillochloris trichoides DG6]
Length = 846
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES-E 200
LA PN+I AL E + EA+ + +++L+P FE L +A++ YA ++ +
Sbjct: 576 LAREPNNISALNLRAEANYTESRYDEALGDTNTVLKLDPRNFEALLRRARLNRYAFQNPQ 635
Query: 201 AAIKGFEEILRKDPLRVEAYHG 222
AA+ F + DP + EA G
Sbjct: 636 AALADFTAAIGVDPNQTEAREG 657
>gi|21226703|ref|NP_632625.1| hypothetical protein MM_0601 [Methanosarcina mazei Go1]
gi|20904990|gb|AAM30297.1| conserved protein [Methanosarcina mazei Go1]
Length = 1024
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 160 IKSQKLVE-AVDVIDRLIELEPNE-FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
I S+K E A++ D L+E+ P + WQ + + Y + A++ FE+ L DP +
Sbjct: 23 IGSEKNFEKALEAFDALLEINPKDTVAWQ-YRGNILRYLDRPDEALEAFEKALAFDPENI 81
Query: 218 EA--YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD-LRDFKLLIAQIKVMESKH 274
A + GL + Y LN EK +E +++ + + L L + Q+ +H
Sbjct: 82 PARYFKGLTLGY------LNLPEKALEAFRGVIERDPENAGALYYSGLALNQL----GRH 131
Query: 275 SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+EA+ E +K P + + +G+ +L K EA + FEK L P
Sbjct: 132 TEAVSALSEALKINPDNPGAWYYRGVSLYILGKCMEALEAFEKTLALEP 180
>gi|418668261|ref|ZP_13229663.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418698514|ref|ZP_13259491.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418732091|ref|ZP_13290167.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
12758]
gi|421114404|ref|ZP_15574822.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410013975|gb|EKO72048.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410755770|gb|EKR17398.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410762657|gb|EKR28818.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410773491|gb|EKR53518.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
12758]
gi|455666319|gb|EMF31755.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Pomona str. Fox 32256]
Length = 304
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 169 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKW 228
Query: 318 FRRLVP 323
LVP
Sbjct: 229 ANSLVP 234
>gi|223935078|ref|ZP_03626996.1| TPR repeat-containing protein [bacterium Ellin514]
gi|223895962|gb|EEF62405.1| TPR repeat-containing protein [bacterium Ellin514]
Length = 689
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 81/175 (46%), Gaps = 12/175 (6%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
++ + +E P+ E +LL + AG+ E A++ F +ILR +P +A +
Sbjct: 406 SIALFSHTLEASPDAQEARLLLGKAFCTAGQPEKAMEQFSQILRSNPNSADALFAI---- 461
Query: 228 DGSDKKLNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
L E ++++A++ + + S ++ +F + ++ + EA+ +++ ++
Sbjct: 462 ----GVLRTAEHKLDEAVDYLTQAVRLSPEMPNFHSQLGEVLLARGNLGEAMAQFDQTLQ 517
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKI 341
PRD + +G L K + A +F + +L P++ E F D +A +
Sbjct: 518 LAPRDAIAHRQKGCTLARLGKLENAMAEFGEASQLAPQD---AECFYDLALALAL 569
>gi|256004184|ref|ZP_05429167.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360]
gi|281419440|ref|ZP_06250454.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
gi|385777968|ref|YP_005687133.1| hypothetical protein Clo1313_0600 [Clostridium thermocellum DSM
1313]
gi|419722004|ref|ZP_14249156.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum AD2]
gi|419726971|ref|ZP_14253981.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum YS]
gi|255991774|gb|EEU01873.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360]
gi|281406846|gb|EFB37110.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
gi|316939648|gb|ADU73682.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum DSM 1313]
gi|380769557|gb|EIC03467.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum YS]
gi|380782043|gb|EIC11689.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum AD2]
Length = 591
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
K EA++ +++ IE+ PNE +K + + E A++ +++ +P L
Sbjct: 113 KFEEALETVNKFIEMSPNEPNGYTVKGSILIMIEKYEEALEVSNKVIAMNPNNQSV---L 169
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALRVYE 282
+AY L + K+ ++A+E C K + S D D + I+ + EA+ +
Sbjct: 170 SVAYSNKGYALVWL-KKPKEALEACNKSLELSGDNLDAHIAISLAHSSLGNYEEAVNWCD 228
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL-VPRNHPYREYFVDNMVATKI 341
+ +K +P PY+ + L K EA + K L VP+N Y + N A I
Sbjct: 229 KAIKIDPNAVEPYINKSNYLVNLGKSKEALECCSKASELNVPQNPVYESIILTNKSAALI 288
Query: 342 F 342
F
Sbjct: 289 F 289
>gi|254179720|ref|ZP_04886319.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
gi|184210260|gb|EDU07303.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
Length = 1454
Score = 40.8 bits (94), Expect = 0.88, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 854 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 912
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 913 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 969
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 970 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1025
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1026 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1054
>gi|53719291|ref|YP_108277.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243]
gi|52209705|emb|CAH35664.1| hypothetical protein BPSL1666 [Burkholderia pseudomallei K96243]
Length = 1454
Score = 40.8 bits (94), Expect = 0.89, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 854 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 912
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 913 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 969
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 970 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1025
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1026 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1054
>gi|406934379|gb|EKD68695.1| TPR Domain containing protein [uncultured bacterium]
Length = 498
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 7/189 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
+E+ EK ++ + +P ++A L + + A++ R+I L P+
Sbjct: 53 FEDAEKMFKKVIEFDPFYVDAYNNLGNIYMLRNNFDLALEQFTRVINLAPSNDSAYSNIG 112
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ +G AI+ F++ +P VEA++ L Y + N E I+KA+E
Sbjct: 113 LIYMKSGSLSKAIEMFQKASELNPKSVEAFYNLASCYLLFNSPQN-AETAIKKALEI--- 168
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
K D + K ++A+ M K+ EA +++EE++ + +F G+I ++ +
Sbjct: 169 ---KPDDYESKSVLAKAYSMGKKYDEARKLFEEVIGADSSNFDALNELGLICLYQKEYKK 225
Query: 311 AEKQFEKFR 319
A + FEK +
Sbjct: 226 ANEYFEKIK 234
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP +EA L + A I + +E++P+++E + + A+ S + + A K
Sbjct: 135 NPKSVEAFYNLASCYLLFNSPQNAETAIKKALEIKPDDYESKSVLAKAYSMGKKYDEARK 194
Query: 205 GFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
FEE++ D +A + GL+ Y KK NE ++I + K +KS + +
Sbjct: 195 LFEEVIGADSSNFDALNELGLICLYQKEYKKANEYFEKI-----KGNKNIEKSSKVYYNM 249
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPR 290
I K+ +EA Y E +K P
Sbjct: 250 AICHEKLKNV--TEARDAYAESIKRNPN 275
>gi|126451956|ref|YP_001066323.1| hypothetical protein BURPS1106A_2058 [Burkholderia pseudomallei
1106a]
gi|134277247|ref|ZP_01763962.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
gi|126225598|gb|ABN89138.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
gi|134250897|gb|EBA50976.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
Length = 1454
Score = 40.8 bits (94), Expect = 0.89, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 854 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 912
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 913 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 969
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 970 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1025
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1026 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1054
>gi|425447216|ref|ZP_18827207.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732284|emb|CCI03758.1| exported hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 605
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 80/187 (42%), Gaps = 14/187 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP D EA V + +A+ ++ IE+ P + L+ E + AIK
Sbjct: 415 NPQDAEAYYKRGYVYYDLKDYEKAIKDYNKAIEINPQNADSYYLRGSFYYILKEYDKAIK 474
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE---KAMERCKKEKKKSDLRDFK 261
+ + + +P AY+ Y L E +K I+ KA+E + D
Sbjct: 475 DYNKAIEINPQNAIAYNNRGYVY----HNLKEYDKAIKDYNKALEINPQ------YADAY 524
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
+ + ++ +A++ Y + ++ P+ Y +G++Y +L+ ++A K + K +
Sbjct: 525 YTRGNVYLHLKEYDKAIKDYNKAIEINPQYADAYNNRGVVYEILKDYEKAIKDYNKALEI 584
Query: 322 VPRNHPY 328
P+ HPY
Sbjct: 585 NPQ-HPY 590
>gi|167918851|ref|ZP_02505942.1| hypothetical protein BpseBC_09870 [Burkholderia pseudomallei BCC215]
Length = 1451
Score = 40.8 bits (94), Expect = 0.91, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 851 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 909
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 910 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 966
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 967 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1022
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1023 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1051
>gi|451982314|ref|ZP_21930632.1| exported hypothetical protein [Nitrospina gracilis 3/211]
gi|451760479|emb|CCQ91916.1| exported hypothetical protein [Nitrospina gracilis 3/211]
Length = 223
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
K+ + +EA+ L + PN ++ Q A + S + A+ F +++ P +
Sbjct: 78 KTGRFLEAMKAAQALADKYPNHYDVQFNLANMMSAVQRFDQAVAAFHKVVEMRPQEGLGH 137
Query: 221 HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIK 268
GL +A G+ K +E KR+ +A K++K S ++ +++I Q+K
Sbjct: 138 VGLGLALFGNGKT-DEAVKRLRQARALFKEQKNISWYQNVRIMIGQMK 184
>gi|76809563|ref|YP_333589.1| hypothetical protein BURPS1710b_2194 [Burkholderia pseudomallei
1710b]
gi|167738470|ref|ZP_02411244.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
14]
gi|217421376|ref|ZP_03452880.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|242316339|ref|ZP_04815355.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|254258508|ref|ZP_04949562.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
gi|254297570|ref|ZP_04965023.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|403518751|ref|YP_006652884.1| hypothetical protein BPC006_I2103 [Burkholderia pseudomallei BPC006]
gi|76579016|gb|ABA48491.1| Tetratricopeptide repeat family [Burkholderia pseudomallei 1710b]
gi|157807326|gb|EDO84496.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|217395118|gb|EEC35136.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|242139578|gb|EES25980.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|254217197|gb|EET06581.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
gi|403074393|gb|AFR15973.1| TPR repeat-containing protein [Burkholderia pseudomallei BPC006]
Length = 1451
Score = 40.8 bits (94), Expect = 0.92, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 851 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 909
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 910 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 966
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 967 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1022
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1023 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1051
>gi|298376932|ref|ZP_06986886.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
gi|298265916|gb|EFI07575.1| TPR-domain containing protein [Bacteroides sp. 3_1_19]
Length = 321
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D E + L+ + L +A DV++R++E+EP+ +L + + + I
Sbjct: 61 DFETMSYLVSAYTMANDLGKAEDVLNRMVEMEPDHIATRLTRVNLLFMLDKDAEVITDCL 120
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
++ +P AY + A K N+V I + + K D D LL A+I
Sbjct: 121 HVIELEPSNHVAYFMMAKA----KKATNDVFGAI---ADLTRSISLKEDFADAYLLRAEI 173
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + EAL E+ ++ P + YL +G I+ L + A F++ L P N
Sbjct: 174 LLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMALGDIEAANSDFQQVLDLNPFN 231
>gi|237812363|ref|YP_002896814.1| hypothetical protein GBP346_A2111 [Burkholderia pseudomallei MSHR346]
gi|237506629|gb|ACQ98947.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
MSHR346]
Length = 1451
Score = 40.8 bits (94), Expect = 0.92, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 851 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 909
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 910 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 966
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 967 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1022
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1023 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1051
>gi|307150632|ref|YP_003886016.1| hypothetical protein Cyan7822_0709 [Cyanothece sp. PCC 7822]
gi|306980860|gb|ADN12741.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
Length = 441
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 132 EEKEKEIEQHLAA---NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL 188
+ + EI+Q+L NP+D +AL L ++ +L +A+ +++++++ +P + +WQ
Sbjct: 306 QSSDSEIQQYLQTLNKNPDDFDALVALANRYLQLGELEQAIIILEKIVDKKPQDLQWQFN 365
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAME 246
AQ+ A ++ IL +D +A GL+ G + ++ K+ E+
Sbjct: 366 LAQLYELTQAKPKAEAIYDRILAQDQNNFKALMGKGLIRKESGDHQTAQQLFKQAEQVAP 425
Query: 247 RCKKEKKKSDL 257
++K D+
Sbjct: 426 STDLKQKIHDI 436
>gi|167910819|ref|ZP_02497910.1| hypothetical protein Bpse112_10010 [Burkholderia pseudomallei 112]
gi|254188884|ref|ZP_04895395.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
52237]
gi|386861688|ref|YP_006274637.1| hypothetical protein BP1026B_I1611 [Burkholderia pseudomallei 1026b]
gi|418533827|ref|ZP_13099680.1| TPR repeat-containing protein [Burkholderia pseudomallei 1026a]
gi|418540855|ref|ZP_13106368.1| TPR repeat-containing protein [Burkholderia pseudomallei 1258a]
gi|418547096|ref|ZP_13112271.1| TPR repeat-containing protein [Burkholderia pseudomallei 1258b]
gi|157936563|gb|EDO92233.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pasteur
52237]
gi|385360099|gb|EIF66039.1| TPR repeat-containing protein [Burkholderia pseudomallei 1258a]
gi|385360484|gb|EIF66415.1| TPR repeat-containing protein [Burkholderia pseudomallei 1026a]
gi|385362198|gb|EIF68030.1| TPR repeat-containing protein [Burkholderia pseudomallei 1258b]
gi|385658816|gb|AFI66239.1| TPR repeat-containing protein [Burkholderia pseudomallei 1026b]
Length = 1451
Score = 40.8 bits (94), Expect = 0.92, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 851 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 909
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 910 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 966
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 967 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1022
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1023 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1051
>gi|197120080|ref|YP_002140507.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197089440|gb|ACH40711.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 405
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 168 AVDVIDRLIELEP-NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
A + R I ++P N ++ L + Q+ G+++ AIK ++ L DP + + L
Sbjct: 48 ATGELKRAISMDPTNTQAYKFLASAYQA-QGKTDEAIKTYKNSLALDPTQDSIHTNLGNI 106
Query: 227 YDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
Y KK N E+ + A K L + L Q+ V ++ EA ++++ +
Sbjct: 107 YL-QQKKYNLAEREFKDA----AKLNPTDTLAPYTL--GQLYVQTERYGEAETQFKKVSR 159
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
P D PY G +Y K +A KQ + +L P+
Sbjct: 160 MAPTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPK 197
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 213 DPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD-FKLLIAQIKVME 271
DP +AY L AY + + + ++A++ K +D + I + +
Sbjct: 59 DPTNTQAYKFLASAY--------QAQGKTDEAIKTYKNSLALDPTQDSIHTNLGNIYLQQ 110
Query: 272 SKHSEALRVYEELVKEEPRD-FRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN-HPY 328
K++ A R +++ K P D PY G +Y + EAE QF+K R+ P + +PY
Sbjct: 111 KKYNLAEREFKDAAKLNPTDTLAPYTL-GQLYVQTERYGEAETQFKKVSRMAPTDPNPY 168
>gi|294645908|ref|ZP_06723581.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
gi|292638749|gb|EFF57094.1| tetratricopeptide repeat protein [Bacteroides ovatus SD CC 2a]
Length = 316
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IE+ P + +Q A V G E AI+ + IL+ DP
Sbjct: 213 QAALKARQFQRALDDIVKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILDNILKADPKY 272
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY L + + +++K E C KK +L D
Sbjct: 273 AEAYRLLGL-----------CQIQLKKTDEACGNFKKAKELGD 304
>gi|167845602|ref|ZP_02471110.1| tetratricopeptide repeat family protein [Burkholderia pseudomallei
B7210]
gi|254197877|ref|ZP_04904299.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|169654618|gb|EDS87311.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
Length = 1451
Score = 40.8 bits (94), Expect = 0.93, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 851 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 909
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 910 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 966
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 967 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1022
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1023 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1051
>gi|167815662|ref|ZP_02447342.1| hypothetical protein Bpse9_10994 [Burkholderia pseudomallei 91]
gi|226197223|ref|ZP_03792800.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan
9]
gi|418385210|ref|ZP_12967097.1| TPR repeat-containing protein [Burkholderia pseudomallei 354a]
gi|418553288|ref|ZP_13118115.1| TPR repeat-containing protein [Burkholderia pseudomallei 354e]
gi|225930602|gb|EEH26612.1| tetratricopeptide repeat protein [Burkholderia pseudomallei Pakistan
9]
gi|385371828|gb|EIF76984.1| TPR repeat-containing protein [Burkholderia pseudomallei 354e]
gi|385376590|gb|EIF81257.1| TPR repeat-containing protein [Burkholderia pseudomallei 354a]
Length = 1451
Score = 40.8 bits (94), Expect = 0.93, Method: Composition-based stats.
Identities = 43/216 (19%), Positives = 93/216 (43%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 851 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 909
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 910 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALEL--NSK 966
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
L + Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 967 HPGALNNG----VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 1022
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 1023 ASLRRALEIEPHN-------AEALFALGTVLERVDR 1051
>gi|125975528|ref|YP_001039438.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405]
gi|125715753|gb|ABN54245.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum ATCC 27405]
Length = 591
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
K EA++ +++ IE+ PNE +K + + E A++ +++ +P L
Sbjct: 113 KFEEALETVNKFIEMSPNEPNGYTVKGSILIMIEKYEEALEVSNKVIAMNPNNQSV---L 169
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALRVYE 282
+AY L + K+ ++A+E C K + S D D + I+ + EA+ +
Sbjct: 170 SVAYSNKGYALVWL-KKPKEALEACNKSLELSGDNLDAHIAISLAHSSLGNYEEAVNWCD 228
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL-VPRNHPYREYFVDNMVATKI 341
+ +K +P PY+ + L K EA + K L VP+N Y + N A I
Sbjct: 229 KAIKIDPNAVEPYINKSNYLVNLGKSKEALECCSKASELNVPQNPVYESIILTNKSAALI 288
Query: 342 F 342
F
Sbjct: 289 F 289
>gi|414079258|ref|YP_007000682.1| hypothetical protein ANA_C20168 [Anabaena sp. 90]
gi|413972537|gb|AFW96625.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 779
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
A++ +E +H +AL VYE+L+K +P + +L +GII L++ +A + + +
Sbjct: 558 AEMLFLEKRHEDALAVYEQLIKIQPENPENWLKRGIILNRLKRYKDA---IASYNQAIKI 614
Query: 325 NHPYREYFVDNMVATKIFG 343
N Y + + D VA G
Sbjct: 615 NPEYHQAWCDIGVACGNLG 633
>gi|253702403|ref|YP_003023592.1| hypothetical protein GM21_3815 [Geobacter sp. M21]
gi|251777253|gb|ACT19834.1| TPR repeat-containing protein [Geobacter sp. M21]
Length = 399
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 13/156 (8%)
Query: 172 IDRLIELEP-NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS 230
+ R I ++P N ++ L Q+ G+++ AIK ++ L DP + + L Y
Sbjct: 52 LKRAISMDPTNTQAYKYLAGAYQA-QGKTDEAIKTYKYSLALDPTQASVHTSLGNVY--- 107
Query: 231 DKKLNEVEKRIEKAMERCKKEKKKSDLRDF--KLLIAQIKVMESKHSEALRVYEELVKEE 288
++++ ER K+ K D D + Q+ V ++ EA ++++ +
Sbjct: 108 ------LQQKKYNLAEREFKDAGKLDPTDTLAPYTLGQLYVQTERYGEAEAQFKKVSRMA 161
Query: 289 PRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
P D PY G +Y K +A KQ + +L P+
Sbjct: 162 PTDPNPYYSLGAVYNKEGKYADAVKQLTQAVKLRPK 197
>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1122
Score = 40.8 bits (94), Expect = 0.95, Method: Composition-based stats.
Identities = 53/202 (26%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 131 YEEK--EKEIEQHLAAN---PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE--- 182
Y++K ++ I ++L A+ PN + L ++L EA + I+L PN
Sbjct: 778 YKQKNYDEAIREYLIADELKPNQSDLSYNLGITYYYRKELEEAKKWYLKSIQLNPNYCDA 837
Query: 183 -FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI 241
F ++ + Q+Y E AI+ +++ D +A + + YD KLN+ E+ I
Sbjct: 838 YFNLGIVYYEEQNY----EEAIQMYKKSFELDSKFADACYNTSITYD----KLNDSEQCI 889
Query: 242 EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGII 301
+ + + + K D F + QI + +AL++Y +LV P D GI
Sbjct: 890 YWSEKAIEIDPKCIDTYKF---LGQIFSKLDNNEKALKIYLKLVDLLPDDENALYNLGIT 946
Query: 302 YTLLRKKDEAEKQFEKFRRLVP 323
Y LL +EA + FEK ++ P
Sbjct: 947 YQLLHMYNEAIEVFEKGYKINP 968
>gi|183221734|ref|YP_001839730.1| hypothetical protein LEPBI_I2363 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167780156|gb|ABZ98454.1| Putative protein with TPR repeats [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 372
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 18/197 (9%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E+ L + PN+I+ L + K + +A+ +R +L+P F L +SY G+
Sbjct: 182 EKLLGSQPNNIKILTEIGNSYRKIKDFDKAILYYERAKDLDPKNF--FALYGLAESYRGK 239
Query: 199 SE--AAIKGFEEILRKDP---LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK 253
+ AI +E+IL DP L + Y + DK L K + + K
Sbjct: 240 KDFKTAITYWEKILESDPDNKLIINRYADSLRGLGNYDKALECFNKILASGDDYFALLGK 299
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+ LR LI ++ E +Y L+ + P D RP L ++ ++ KK +A K
Sbjct: 300 AAALR----LIGDLEKAEE-------IYLGLLSKSPNDPRPALELSDLWDIMGKKPQAIK 348
Query: 314 QFEKFRRLVPRNHPYRE 330
E + P N RE
Sbjct: 349 LLEDLAKKNPSNEAIRE 365
>gi|301311081|ref|ZP_07217010.1| TPR-domain containing protein [Bacteroides sp. 20_3]
gi|423339054|ref|ZP_17316795.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
distasonis CL09T03C24]
gi|300831144|gb|EFK61785.1| TPR-domain containing protein [Bacteroides sp. 20_3]
gi|409231699|gb|EKN24549.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
distasonis CL09T03C24]
Length = 321
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D E + L+ + L +A DV++R++E+EP+ +L + + + I
Sbjct: 61 DFETMSYLVSAYTMANDLGKAEDVLNRMVEMEPDHIATRLTRVNLLFMLDKDAEVITDCL 120
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
++ +P AY + A K N+V I + + K D D LL A+I
Sbjct: 121 HVIELEPSNHVAYFMMAKA----KKATNDVFGAI---ADLTRSISLKEDFADSYLLRAEI 173
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + EAL E+ ++ P + YL +G I+ L + A F++ L P N
Sbjct: 174 LLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMALGDIEAANSDFQQVLDLNPFN 231
>gi|262384168|ref|ZP_06077304.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
gi|262295066|gb|EEY82998.1| TPR repeat-containing protein [Bacteroides sp. 2_1_33B]
Length = 321
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D E + L+ + L +A DV++R++E+EP+ +L + + + I
Sbjct: 61 DFETMSYLVSAYTMANDLGKAEDVLNRMVEMEPDHIATRLTRVNLLFMLDKDAEVITDCL 120
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
++ +P AY + A K N+V I + + K D D LL A+I
Sbjct: 121 HVIELEPSNHVAYFMMAKA----KKATNDVFGAI---ADLTRSISLKEDFADAYLLRAEI 173
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + EAL E+ ++ P + YL +G I+ L + A F++ L P N
Sbjct: 174 LLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMALGDIEAANSDFQQVLDLNPFN 231
>gi|220922062|ref|YP_002497363.1| hypothetical protein Mnod_2075 [Methylobacterium nodulans ORS 2060]
gi|219946668|gb|ACL57060.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060]
Length = 292
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 39/213 (18%), Positives = 83/213 (38%), Gaps = 27/213 (12%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NPND A T ++ EA+ + I+L+PN +A +G +++A++
Sbjct: 66 NPNDAAAYNTRGAAYARAGSYNEAIADFTKAIQLDPNSASAYSNRALAYRQSGRNDSALQ 125
Query: 205 GFEEILRKDPLRVEAYHG------LVMAYDGSDKKLNE--------VEKRIEKAMERCKK 250
F + DP AY G + Y+ + L++ E + + R +
Sbjct: 126 DFTRAINADPNYSAAYIGRANLQRALGNYEAAYSDLSQAIRLTPESAEAYHARGLVRQAQ 185
Query: 251 EKKKSDLRDFKLLI-------------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
+ ++ + DF I Q + ++ +A+ Y + +D +
Sbjct: 186 GQHRAAIGDFDAAIDRNPFVNAPYAARGQSLIATNQFDKAIEDYNAALNVNNKDADSWAY 245
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE 330
+G+ Y ++ EA + +++ + P N R+
Sbjct: 246 RGLAYEKSGRRQEAMESYQRASAIDPNNAVARQ 278
>gi|56460771|ref|YP_156052.1| ribonuclease HII [Idiomarina loihiensis L2TR]
gi|81363280|sp|Q5QZK7.1|RNH2_IDILO RecName: Full=Ribonuclease HII; Short=RNase HII
gi|56179781|gb|AAV82503.1| Ribonuclease HII [Idiomarina loihiensis L2TR]
Length = 187
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 102 IAAPVAAAATV-------ESTNESTKDTTSAREDVSYEEKEKEIEQHLA-ANPNDIEALQ 153
IA PV AAA + E N+S K + RE +S E KEK + +A ++P++IEA+
Sbjct: 13 IAGPVVAAAVILDPDNPIEGLNDSKKLSEKKREKLSLEIKEKALYWAIAQSDPDEIEAIN 72
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPN 181
L Q+ VEA+ V ++ ++ N
Sbjct: 73 ILWASMKAMQRAVEALPVKPDMVLVDGN 100
>gi|406982204|gb|EKE03553.1| hypothetical protein ACD_20C00186G0002 [uncultured bacterium]
Length = 515
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/138 (20%), Positives = 59/138 (42%)
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
G+ + AI+ +++ ++ + AY+ L + YD + + L +E + + K +
Sbjct: 86 GQYDLAIQNYKQAIKYNAEDASAYYNLAVTYDRTGQTLIAIENYKKSLSLNPELNNAKRN 145
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L + + A++ Y ++ +PRD + Y G+ Y+ + D A K +
Sbjct: 146 LCAAYFDLGNNYYSHKDFNSAIQAYNNVINIDPRDAQAYSNLGLAYSYNAQPDLAIKSYN 205
Query: 317 KFRRLVPRNHPYREYFVD 334
K L P N + + D
Sbjct: 206 KAISLDPMNGDFYKALAD 223
>gi|425468819|ref|ZP_18847804.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9701]
gi|389884522|emb|CCI35187.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9701]
Length = 707
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ--LLKAQVQSYAGES 199
L NP+ +EALQ + + ++ EA++ ++ I++ P+ WQ L + + G++
Sbjct: 359 LKINPDYLEALQGQADALLALKRYSEALNTYEKAIQINPDS-AWQAWLGRGKALDKLGKN 417
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE-----KKK 254
+ A++ FE +L +P +A+ G Y ++ + +K +EK + K + KK
Sbjct: 418 QEALESFERVLSLNPAASQAWQGKADIYL-ELQQYSAAQKALEKLLTFQKNDAKIWYKKG 476
Query: 255 SDLRDFKLLIAQIKVME-----------------------SKHSEALRVYEELVKEEPRD 291
L++ + +K + +K ++AL Y + + P+
Sbjct: 477 WSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINDALESYSKAGQFNPQF 536
Query: 292 FRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+ + QGII L + EA E F + N Y + +++
Sbjct: 537 SQAHYSQGIILQKLGRNSEA---LEAFNQATKANSNYYQAWLN 576
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 99/228 (43%), Gaps = 20/228 (8%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +++L+ + N+ + K
Sbjct: 418 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQKNDAKIWYKKGW 477
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G+ +LN++ +E + +
Sbjct: 478 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSLYQLNKINDALESYSKAGQF 532
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q ++SEAL + + K ++ +L QG + L + E
Sbjct: 533 NPQFSQAHYSQGIILQ---KLGRNSEALEAFNQATKANSNYYQAWLNQGALLHQLERFQE 589
Query: 311 AEKQFEKFRRLVPR---------NHPYREYFVDNMVATKIFGEKVDRE 349
A +EK RR+ + N YR DN A + + + R+
Sbjct: 590 AITSYEKARRISSQKAEVFIGIGNACYR--LGDNSQAINAYQQAIQRQ 635
>gi|336414265|ref|ZP_08594611.1| hypothetical protein HMPREF1017_01719 [Bacteroides ovatus
3_8_47FAA]
gi|335933377|gb|EGM95379.1| hypothetical protein HMPREF1017_01719 [Bacteroides ovatus
3_8_47FAA]
Length = 568
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IE+ P + +Q A V G E AI+ IL+ DP
Sbjct: 465 QAALKARQFQRALDDIAKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILNNILKTDPKY 524
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 525 GEAY-----------RLLGLCQIQLKKTDEACSNFKKAKELGD 556
>gi|414078778|ref|YP_006998096.1| hypothetical protein ANA_C13625 [Anabaena sp. 90]
gi|413972194|gb|AFW96283.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 383
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 77/185 (41%), Gaps = 24/185 (12%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A+ ++++++ PN+ + + ++ G+ +AAI+ + + L+ +P EAY +
Sbjct: 147 AIQDYNQVLKINPNDANAYINRGNLRDALGDKQAAIQDYNQALKINPNYAEAYLNRGLTR 206
Query: 228 DGSDKKLNEVEKRIE-------KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRV 280
D K +E + A+ + + DL D K A+
Sbjct: 207 DDLGDKKGAIEDYNQALKINPNDAVSYRNRGNARDDLGDKK--------------GAIED 252
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATK 340
Y + +K P D YL +G + L K A + + + ++ P Y E +++ VA
Sbjct: 253 YNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYNQALKINPN---YAEAYLNRGVARD 309
Query: 341 IFGEK 345
G+K
Sbjct: 310 TLGDK 314
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 118 STKDTTSAREDVSYEEKEKEIE---QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDR 174
S ++ +AR+D+ +K+ IE Q L NPND + +R A+ ++
Sbjct: 232 SYRNRGNARDDLG--DKKGAIEDYNQALKINPNDAVSYLNRGNLRDALGDKQAAIQDYNQ 289
Query: 175 LIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
+++ PN E L + + G+ +A I+ F + L+ +P +AY+ AY
Sbjct: 290 ALKINPNYAEAYLNRGVARDTLGDKQAVIQDFNQALKINPNYAKAYYNRGNAY 342
>gi|404494792|ref|YP_006718898.1| TPR domain-containing protein [Pelobacter carbinolicus DSM 2380]
gi|77546775|gb|ABA90337.1| TPR domain protein [Pelobacter carbinolicus DSM 2380]
Length = 313
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 73/189 (38%), Gaps = 7/189 (3%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+Q L NP E L ++ L +A +D I L P + + S G
Sbjct: 119 FKQALQVNPASAETCYRLGLSYLRQSDLEQARAALDDAIRLNPKYTRALFILGMIYSQQG 178
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
AI+ F ++ + P EA L MA + +L+E + EK +
Sbjct: 179 NPTEAIRLFRQVEQASPDYTEACFELGMALL-RNGELDEAAAQFEKTTVNSPR------F 231
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
++ + + K SEA+ Y + +++ PRD +L L + D A + +K
Sbjct: 232 TPAHFMLGEARRRAGKLSEAISAYRQALEQNPRDTEGWLHLAECQARLGQTDAAREALDK 291
Query: 318 FRRLVPRNH 326
L P +H
Sbjct: 292 VLSLHPEHH 300
>gi|390440877|ref|ZP_10229073.1| Similar to tr|Q7NMJ3|Q7NMJ3 [Microcystis sp. T1-4]
gi|389835804|emb|CCI33199.1| Similar to tr|Q7NMJ3|Q7NMJ3 [Microcystis sp. T1-4]
Length = 251
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 165 LVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV 224
+++++ + + ++L PN + +++ Q A + AA EE ++ P + AY+ L
Sbjct: 69 FIKSIEALKKSLQLNPNHLDGRVILGWTQHLAKQPLAARTTLEETIKIAPDHLAAYNALG 128
Query: 225 MAYDGSDKKLNEVEKRIEKAM---ERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
+ Y V +EKA+ + K +++ + L +A ++ + + A+
Sbjct: 129 IVY--------LVAGDLEKAVVTHTKAANLKPDNEIAYYNLSLAYHRLKD--FNSAITNA 178
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE-YFVDNM 336
E+ VK EP + P + IIY +A+ ++K R L R YRE +F+ ++
Sbjct: 179 EKAVKLEPNNPHPLVALAIIYLDQGDSKKAQDTYKKARDLDGR---YREKWFLAHL 231
>gi|428207659|ref|YP_007092012.1| hypothetical protein Chro_2669 [Chroococcidiopsis thermalis PCC
7203]
gi|428009580|gb|AFY88143.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 179
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
+E E L P++ AL+ L+EVR++ + A+ +++LI L PNE + L+ QV +
Sbjct: 39 QEYELVLKQEPDNQAALKGLVEVRVRQRDFQGAIAPLEKLIALNPNEGLYHLVLGQVYAA 98
Query: 196 AGESEAAIKGFEEILRKD 213
S+ A F+ ++ D
Sbjct: 99 QKNSDRANAAFDRAMQID 116
>gi|73670453|ref|YP_306468.1| hypothetical protein Mbar_A2994 [Methanosarcina barkeri str.
Fusaro]
gi|72397615|gb|AAZ71888.1| hypothetical protein Mbar_A2994 [Methanosarcina barkeri str.
Fusaro]
Length = 417
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 164 KLVEAVDVIDRLIELEPN-EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
+L EA+ DR IELEP E W K V + G E A++ +++IL+K P EA+ G
Sbjct: 240 RLEEAIAAYDRTIELEPAFEIAWDN-KGVVLARLGRFEEALEIYDKILQKFPEYAEAWAG 298
Query: 223 ---LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALR 279
+ +A D ++ L + R + E ++ L L++++ ++ E+L+
Sbjct: 299 KGSIFLALDREEEALEAYSSAL-----RIRPEYLEA-LTSTGSLLSRL----GRYEESLK 348
Query: 280 VYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+Y++ ++ P+D R +G + + + K++EA
Sbjct: 349 IYDKALQLVPKDPRLLAAKGFVLSEMGKQEEA 380
>gi|434406348|ref|YP_007149233.1| TIGR03032 family protein [Cylindrospermum stagnale PCC 7417]
gi|428260603|gb|AFZ26553.1| TIGR03032 family protein [Cylindrospermum stagnale PCC 7417]
Length = 1083
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 4/159 (2%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN-EFEWQLLKA 190
+E ++ L NPN EA L VR+ + L A+ I+ +P+ F L
Sbjct: 461 DEAALAYQKALTINPNYAEAHNNLGIVRVAEKNLAAAISCFTAAIKSKPDYAFAHNNLGL 520
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
Q +EAA K F E L+ +P EAY L M + + + ++ R K
Sbjct: 521 VWQMQTKFAEAAAK-FREALQINPEYAEAYLNLGMVLEAQGNLQDAIA--CYRSAVRHKT 577
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
+ K+D R LI V + EA ++E+++K +P
Sbjct: 578 DYIKADNRLGLALIKLAMVSKGDVEEARGIFEQVLKLQP 616
>gi|421097063|ref|ZP_15557760.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200901122]
gi|410799931|gb|EKS01994.1| tetratricopeptide repeat protein [Leptospira borgpetersenii str.
200901122]
Length = 262
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 126 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGSIEKAEVSLKW 185
Query: 318 FRRLVP 323
LVP
Sbjct: 186 ANSLVP 191
>gi|20093095|ref|NP_619170.1| hypothetical protein MA4306 [Methanosarcina acetivorans C2A]
gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1079
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE +Q LAAN +D EALQ + + + EAV+ + L+ELE E +A
Sbjct: 728 EEAIAYYDQLLAANASDPEALQGKSQALVNLGRYEEAVECFNPLLELESENIEALDGRAF 787
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ +G E A++ ++ IL+ +P +A M S L E R E+A E
Sbjct: 788 SLTKSGRQEEALEDYDRILQLEPSNSKA-----MTEKAS---LFEELGRYEEAAST-YGE 838
Query: 252 KKKSDLRDFKLLIAQIKVMES--KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + +++ Q K +E+ A+ Y++++ +P++ +G Y + K
Sbjct: 839 ILRITPENREIMYRQGKALEAMGDFEAAIACYDQILALDPKNIDAINNKGFAYAKMEKYQ 898
Query: 310 EAEKQFEKFRRLVPRN 325
EA ++K P N
Sbjct: 899 EAIASYDKAIEYAPNN 914
>gi|148264413|ref|YP_001231119.1| hypothetical protein Gura_2367 [Geobacter uraniireducens Rf4]
gi|146397913|gb|ABQ26546.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 860
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 80/186 (43%), Gaps = 9/186 (4%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
I + L +D T+ ++ +K + + ++ + + +PN + A + G
Sbjct: 452 ISEGLGGTKSDAVLYNTMASIKFTERKPDDGLKLLQKAKQTDPNLYATYFNLATYFAAVG 511
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
E E A+ + +L+ DP V+A +D ++ R +++ KK K+
Sbjct: 512 EYEKALNEYRTVLQHDPANVKALMCTAALFD--------MKGRENESLAFYKKAKETKAP 563
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
F L +A + ++++ AL V E +K PR+ +G IY +K +A K F+
Sbjct: 564 VAF-LALANFHLKKNENGNALTVLNEAIKTIPRNTAALELKGRIYLQEKKYKDAIKVFDD 622
Query: 318 FRRLVP 323
+ P
Sbjct: 623 IEAISP 628
>gi|389580063|ref|ZP_10170090.1| Flp pilus assembly protein TadD [Desulfobacter postgatei 2ac9]
gi|389401698|gb|EIM63920.1| Flp pilus assembly protein TadD [Desulfobacter postgatei 2ac9]
Length = 784
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 13/197 (6%)
Query: 117 ESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLI 176
E+ K+ +A+E YE+ + E + + P + +A L E + Q V+A + +
Sbjct: 37 EAAKNYFAAQE---YEKAKIEFQNVIQLEPENDKAQCDLGETYVHLQDPVKAAAAFHQAV 93
Query: 177 ELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNE 236
L P + +L Q+ A E++ A K EIL K P +EA H L+ ++ ++
Sbjct: 94 LLNPENLQAKLRLGQILLLAKETKEARKTAGEILEKHPENIEAMH-LLATIQIQERNMDL 152
Query: 237 VEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
K +EKA++ K L +A + + ++ EA Y + ++ + +PY+
Sbjct: 153 ALKTLEKAIDIDGSNPKTH------LFLAHLLFISNRLEEAEPHYLKAIELDETQRKPYM 206
Query: 297 CQGIIYTLLRKKDEAEK 313
+Y RKK E EK
Sbjct: 207 KLAALY---RKKGEIEK 220
>gi|298481740|ref|ZP_06999930.1| tetratricopeptide repeat family protein [Bacteroides sp. D22]
gi|298271962|gb|EFI13533.1| tetratricopeptide repeat family protein [Bacteroides sp. D22]
Length = 571
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLR 216
+ +K+++ A+D I + IE+ P + +Q A V G E AI+ IL+ DP
Sbjct: 468 QAALKARQFQRALDDIVKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILNNILKADPKY 527
Query: 217 VEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
EAY + L + +++K E C KK +L D
Sbjct: 528 AEAY-----------RLLGLCQIQLKKTDEACGNFKKAKELGD 559
>gi|33862569|ref|NP_894129.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT
9313]
gi|33640682|emb|CAE20471.1| TPR repeat [Prochlorococcus marinus str. MIT 9313]
Length = 1057
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 113 ESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVI 172
+S+NES S D + K KE+ + + NPN +A + + A++
Sbjct: 435 QSSNESDGLDLSDTGDTN--GKIKELTKVIELNPNYADAYSLRGVAKFQLDDYQGALEDF 492
Query: 173 DRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA-YDGSD 231
D +E+ PN+ E ++ V+ G++E AI + + + DP +A+ +A YD D
Sbjct: 493 DYALEINPNDAETYFMRGNVKGEIGDTEGAISDYSKAIEIDPKDADAFTNRGLAKYDSKD 552
>gi|417780747|ref|ZP_12428504.1| tetratricopeptide repeat protein [Leptospira weilii str.
2006001853]
gi|410779050|gb|EKR63671.1| tetratricopeptide repeat protein [Leptospira weilii str.
2006001853]
Length = 262
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 127 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGSIEKAEVSLKW 186
Query: 318 FRRLVP 323
LVP
Sbjct: 187 ANSLVP 192
>gi|456864089|gb|EMF82514.1| tetratricopeptide repeat protein [Leptospira weilii serovar Topaz
str. LT2116]
Length = 262
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 127 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGSIEKAEVSLKW 186
Query: 318 FRRLVP 323
LVP
Sbjct: 187 ANSLVP 192
>gi|428210888|ref|YP_007084032.1| hypothetical protein Oscil6304_0361 [Oscillatoria acuminata PCC
6304]
gi|427999269|gb|AFY80112.1| tetratricopeptide repeat protein [Oscillatoria acuminata PCC 6304]
Length = 362
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 83/200 (41%), Gaps = 21/200 (10%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+ ++ + + NP+D +A E + + + A+ +R IEL P+ + +
Sbjct: 123 YQAAIADLNRVIEENPDDADAYMLRAEAQTELGEFQPAIRDYNRAIELSPDNPTFYRRRG 182
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDG---SDKKLNEVEKRIEK---- 243
Q ++ +G+ +I+ F ++ D AY AYD S+ L + EK +E
Sbjct: 183 QSRARSGDYPGSIEDFNRVIDLDANDALAYVFRGNAYDDIGESEAALADYEKALELDPTL 242
Query: 244 AMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
A + + L D++ IA Y + +K P D L +G++Y
Sbjct: 243 AQAYYNRGITRRRLEDYQGAIAD--------------YTKAIKINPTDANSLLNRGVVYA 288
Query: 304 LLRKKDEAEKQFEKFRRLVP 323
LL + +A + + R P
Sbjct: 289 LLEEFPDAIADYTQAIRFNP 308
>gi|254413092|ref|ZP_05026864.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180256|gb|EDX75248.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 1179
Score = 40.8 bits (94), Expect = 1.1, Method: Composition-based stats.
Identities = 44/227 (19%), Positives = 100/227 (44%), Gaps = 20/227 (8%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
+EE ++ + NP+D A + V K K EA+ +D+ +++ P+++ + +L+
Sbjct: 294 HEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEEAISSLDQALKINPDQYYFCILRG 353
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK--KLNEVEKRIEKAMERC 248
G+ A+ + + ++ +P + Y + DK K +E +A+E
Sbjct: 354 CALDKLGKYSEALASYNQAIQINP---DDYTAWINRGSALDKLGKYSEALASYNQALEIN 410
Query: 249 KKEKKKSDLRDFKLLIAQIKVMES--KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
E +LR K + + K+ EA+ ++++++ D+ ++ +G+ L
Sbjct: 411 SDEYSAWNLRG--------KTLNNLGKYEEAITSFDKVIEINSDDYTAWVNRGLALNELG 462
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRESMAS 353
K ++A ++K + P EY+ N +F +++AS
Sbjct: 463 KYEKALASYDKALEINP-----NEYYTWNNQGNALFNLGKYEKALAS 504
Score = 39.7 bits (91), Expect = 2.3, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 7/198 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE ++ L NP+D + K +A+ D+ IE+ PN ++ +
Sbjct: 158 YENAIASYDKALEINPDDYKIWGNRGLALNNLGKYEDAIASYDKAIEINPNNYKAWGKRG 217
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ G+ E AI +++ + +P ++ A D +K EV +++A++
Sbjct: 218 LALNNLGKYEDAIASYDKAIEINPGEYGSWILRSFALDKLEK-YEEVVTSLDQALKINSH 276
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
E + R L KH EA+ Y++ +K P D+ + +G + L K +E
Sbjct: 277 EYYAWNRRAIGL------DKLGKHEEAIASYDKAIKINPDDYTAWRNKGFVLHKLGKYEE 330
Query: 311 AEKQFEKFRRLVPRNHPY 328
A ++ ++ P + +
Sbjct: 331 AISSLDQALKINPDQYYF 348
>gi|164687116|ref|ZP_02211144.1| hypothetical protein CLOBAR_00742 [Clostridium bartlettii DSM
16795]
gi|164604001|gb|EDQ97466.1| tetratricopeptide repeat protein [Clostridium bartlettii DSM 16795]
Length = 1058
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
KE+ + L PND++ L ++ +Q+ E + V D++IE+ P E ++K +
Sbjct: 457 KELNKSLEILPNDVQFLNMKNKILFANQQYEEVIKVCDKIIEINPEVSEAYMMKIRSLY- 515
Query: 196 AGESEAAIKGFEE---ILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
E E + F+E IL KDP + AY + + L EVE+ IE A E K +
Sbjct: 516 --ELEYLKEAFDECNDILYKDPYNLFAYIYKI-------RILIEVEE-IEMAKEEIKSLR 565
Query: 253 KKS-DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRD 291
+ + ++ L A I E K EA +Y+ L+K+ D
Sbjct: 566 SEDVENQNLDFLEALILDYEDKREEATEIYKNLIKKLEED 605
>gi|160890825|ref|ZP_02071828.1| hypothetical protein BACUNI_03270 [Bacteroides uniformis ATCC 8492]
gi|317479742|ref|ZP_07938864.1| tetratricopeptide [Bacteroides sp. 4_1_36]
gi|156859824|gb|EDO53255.1| tetratricopeptide repeat protein [Bacteroides uniformis ATCC 8492]
gi|316904112|gb|EFV25944.1| tetratricopeptide [Bacteroides sp. 4_1_36]
Length = 319
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D E + L +V ++ +L EA +++R+ E+EP L A V Y E A+ G
Sbjct: 59 DFETMGYLAQVYTQTSELDEAHKLLERMTEIEPEHISTYLSLANV-CYMQEDYPAMAG-- 115
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
K + +E G MA+ K N I K K D + +LL A+
Sbjct: 116 --AAKKAIEIE--EGNAMAHYLLGKADNGQGDGIMCIAHLTKAIVLKDDFIEARLLRAEA 171
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
V ++ EA+ + ++ ++P D L +G I K++AE ++K L P N
Sbjct: 172 LVQMQQYKEAMEDIDTILAQDPEDESAILLRGKIEEATGDKEKAESSYQKVTELNPFN 229
>gi|118364085|ref|XP_001015265.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89297032|gb|EAR95020.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1052
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 94/194 (48%), Gaps = 22/194 (11%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV-QSYAG--E 198
L NPN+++A + L +V +K KL I+++PN + L Q+ Q Y
Sbjct: 171 LDINPNNVDAYERLSQVYLKVLKLA---------IQIDPNYKKAYLSMGQICQVYENVKS 221
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLV-MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+ AI+ F++IL P ++ + + + + +K +E + I+KA++ + K L
Sbjct: 222 FDQAIECFKKILEIKPNSTKSLMSIAKICF--TQQKFDEAIENIQKALQI--EPKNAETL 277
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+ +K K+ +AL Y + ++ +P + P +GIIY +K DEA + +K
Sbjct: 278 ERLGYIYQHLK----KYDDALFWYNKSLEVKPNYYFPLFNKGIIYFAQKKLDEAILELQK 333
Query: 318 FRRLVPRNHPYREY 331
++ P ++ Y Y
Sbjct: 334 VIKIKP-DYIYAHY 346
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 32/238 (13%)
Query: 76 IKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKE 135
I ++ V A + F R I P + + AT++ E++KD
Sbjct: 86 IYLSQSIVGQALICFKRAI--EIDPNYSEVYESLATIKDA-ENSKDVI------------ 130
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K +Q + NPN+ +L + + + E++ +++++++ PN V +Y
Sbjct: 131 KYFKQIIEVNPNNYYPYYSLAYLYLNLNMIDESLQCLNKVLDINPNN---------VDAY 181
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK--EKK 253
S+ +K + ++ DP +AY + G ++ E K ++A+E KK E K
Sbjct: 182 ERLSQVYLKVLKLAIQIDPNYKKAYLSM-----GQICQVYENVKSFDQAIECFKKILEIK 236
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + + IA+I + K EA+ ++ ++ EP++ G IY L+K D+A
Sbjct: 237 PNSTKSL-MSIAKICFTQQKFDEAIENIQKALQIEPKNAETLERLGYIYQHLKKYDDA 293
>gi|348523473|ref|XP_003449248.1| PREDICTED: transmembrane and TPR repeat-containing protein 3
[Oreochromis niloticus]
Length = 943
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 151 ALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV-QSYAGESEAAIKGFEEI 209
AL L + +S++ V+A+ V+D L+ P + +LK + ++ ++ A FE I
Sbjct: 704 ALFNLALLYSQSKREVDALPVLDELLHHHPEHIKGLILKGDILMNHKKDTRGAKACFERI 763
Query: 210 LRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
LR DP V+ H L + Y E+R ERC +E
Sbjct: 764 LRMDPTNVQGKHNLCVVY---------FEERDLPRAERCLEE 796
>gi|225620341|ref|YP_002721598.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
gi|225215160|gb|ACN83894.1| TPR domain-containing protein [Brachyspira hyodysenteriae WA1]
Length = 496
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 53/268 (19%), Positives = 116/268 (43%), Gaps = 32/268 (11%)
Query: 73 SPLIKITSVTVAAAALLFMRL-----------PFHSIKPAIAAPVAAAATVESTNESTKD 121
S L +S+ + + A +++++ + I P++ + + + + K+
Sbjct: 237 SELEDFSSIAIDSLAKIYIKIGKNEEASNIYKKYIEINPSLWSIITKFYDKDDGIDQYKE 296
Query: 122 TTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN 181
+A DV + NP++ + L E+ ++ +A+++ ++ IE+ PN
Sbjct: 297 IINAYNDV------------MKENPSNNQYYYYLSELYKDIKEYNKAIELYNKAIEINPN 344
Query: 182 EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR- 240
+F + + A + E +I+ ++ + KDP ++AY L Y+ KL++V+ R
Sbjct: 345 DFNYYISIAALYEDIKEYNKSIEMLKKAIEKDPNNIDAYITLGDLYE----KLDKVDDRN 400
Query: 241 --IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQ 298
KA+E E + L ++ +E +++ A + E+ E P D Q
Sbjct: 401 IIYNKAIEIYSNENDAYSFENIGNLYEKLGDIEQRNN-AYKKAIEIYNETP-DIYHLEKQ 458
Query: 299 GIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+Y L K+ A ++K + P N+
Sbjct: 459 ADLYIKLNDKNNAINSYKKLLEIDPYNN 486
>gi|219849677|ref|YP_002464110.1| hypothetical protein Cagg_2812 [Chloroflexus aggregans DSM 9485]
gi|219543936|gb|ACL25674.1| Tetratricopeptide TPR_2 repeat protein [Chloroflexus aggregans DSM
9485]
Length = 1838
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
+++ ++ +A+ + ++ P+ E Q + + + AAI FE++L+ DP + A
Sbjct: 17 LEANQIEQAIGLTQHILTYHPDNLEAQRILGEAYLAQRDLSAAIATFEQVLQADPENIPA 76
Query: 220 YHGLVMAYDGS---DKKLNEVEKRIE---------KAMERCKKEKKKSD---LRDFKLLI 264
+ GL MAY+ DK + E E+ +E + R E S+ LR + +
Sbjct: 77 HVGLGMAYEWQGRLDKAIAEFEQALEIRPDMPELRAQLVRLYTEAWGSEHAALRLSRSGL 136
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR--KKDEAEKQFEKFRRLV 322
A++ +A+ ++ + E P ++ G+I L R + DEA + K +L
Sbjct: 137 ARLYARGYMLPQAINEFKHFITEHPERLDAWV--GLIEALWRHSQLDEAAETCRKALQLS 194
Query: 323 P 323
P
Sbjct: 195 P 195
>gi|270295832|ref|ZP_06202032.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|423303906|ref|ZP_17281905.1| hypothetical protein HMPREF1072_00845 [Bacteroides uniformis
CL03T00C23]
gi|423307373|ref|ZP_17285363.1| hypothetical protein HMPREF1073_00113 [Bacteroides uniformis
CL03T12C37]
gi|270273236|gb|EFA19098.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|392686597|gb|EIY79900.1| hypothetical protein HMPREF1072_00845 [Bacteroides uniformis
CL03T00C23]
gi|392690388|gb|EIY83656.1| hypothetical protein HMPREF1073_00113 [Bacteroides uniformis
CL03T12C37]
Length = 319
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D E + L +V ++ +L EA +++R+ E+EP L A V Y E A+ G
Sbjct: 59 DFETMGYLAQVYTQTNELDEAHKLLERMTEIEPEHTSTYLSLANV-CYMQEDYPAMAG-- 115
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
K + +E G MA+ K N I K K D + +LL A+
Sbjct: 116 --AAKKAIEIE--EGNAMAHYLLGKADNGQGDGIMCIAHLTKAIVLKDDFIEARLLRAEA 171
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
V ++ EA+ + ++ ++P D L +G I K++AE ++K L P N
Sbjct: 172 LVQMQQYKEAMEDIDTILAQDPEDESAILLRGKIEEATGNKEKAESSYQKVTELNPFN 229
>gi|256841847|ref|ZP_05547353.1| TPR-domain-containing protein [Parabacteroides sp. D13]
gi|256736741|gb|EEU50069.1| TPR-domain-containing protein [Parabacteroides sp. D13]
Length = 321
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D E + L+ + L +A DV++R++E+EP+ +L + + + I
Sbjct: 61 DFETMSYLVSAYTMANDLGKAEDVLNRMVEMEPDHIATRLTRVNLLFMLDKDAEVITDCL 120
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
++ +P AY + A K N+V I + + K D D LL A+I
Sbjct: 121 HVIELEPSNHVAYFMMAKA----KKATNDVFGAI---ADLTRSIALKEDFADSYLLRAEI 173
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + EAL E+ ++ P + YL +G I+ L + A F++ L P N
Sbjct: 174 LLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMALGDIEAANSDFQQVLDLNPFN 231
>gi|428317844|ref|YP_007115726.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
nigro-viridis PCC 7112]
gi|428241524|gb|AFZ07310.1| serine/threonine protein kinase with TPR repeats [Oscillatoria
nigro-viridis PCC 7112]
Length = 710
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 102/250 (40%), Gaps = 32/250 (12%)
Query: 106 VAAAATVESTNESTKDTTSAREDVSY-----EEKEKEIEQHLAANPNDIEALQTLMEVRI 160
+A+ V + N + R + Y EE E+ + P+ E Q +
Sbjct: 332 IASIYGVNTFNSANATDLYNRGNTLYNLSRFEEALAAYERAITLRPDYAEVWQEKAKTLY 391
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
K +K E+ DR IEL+P E + +S+ AI F+ L+ P A+
Sbjct: 392 KLKKYQESQAAYDRAIELKPEYLEAWTGRGYALEKLQQSQEAIASFDNALKIQPDYAAAW 451
Query: 221 HG-------------LVMAYD----------GSDKKLNEVEKRI---EKAMERCKKEKK- 253
G + +Y+ G+ + +++ ++A+E +K +
Sbjct: 452 EGRGDVLLDSQRYEEAIASYEKAVQFQPNLYGAWYNRGQAHQKLKQYDRAVESYQKAVEI 511
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
K D + + + + +K+ EA YE+ V+ +P ++ + +GI +R+ +EA +
Sbjct: 512 KFDNYEAWYNLGNVFLELNKNQEAFEAYEKAVRFQPNFYQGWYSKGIALLKMRRHEEAVE 571
Query: 314 QFEKFRRLVP 323
+EK +L P
Sbjct: 572 AYEKAVKLKP 581
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 87/185 (47%), Gaps = 7/185 (3%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L P+ A + +V + SQ+ EA+ ++ ++ +PN + + Q + +
Sbjct: 441 LKIQPDYAAAWEGRGDVLLDSQRYEEAIASYEKAVQFQPNLYGAWYNRGQAHQKLKQYDR 500
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A++ +++ + EA++ L + +LN+ ++ E A E+ + + +
Sbjct: 501 AVESYQKAVEIKFDNYEAWYNLGNVF----LELNKNQEAFE-AYEKAVRFQPNFYQGWYS 555
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
IA +K+ +H EA+ YE+ VK +P ++ + G Y LRK ++A + + + L
Sbjct: 556 KGIALLKM--RRHEEAVEAYEKAVKLKPDYYQAWYNLGWSYHELRKYEQAIECYNRALDL 613
Query: 322 VPRNH 326
P+ +
Sbjct: 614 NPKEY 618
>gi|333982592|ref|YP_004511802.1| type 12 methyltransferase [Methylomonas methanica MC09]
gi|333806633|gb|AEF99302.1| Methyltransferase type 12 [Methylomonas methanica MC09]
Length = 449
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 7/194 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E EK +Q LA +PND + L +R + E V+ I + +++ PN + +
Sbjct: 37 ESAEKIYQQLLALSPNDADLLHFFGMLRNQLGFAEEGVEYIKKALQVAPNYIDAENSLGN 96
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ G+ E A + F + +P AY L +A L E+ + IE +
Sbjct: 97 IYLQIGQPELAEQCFRRTIELNPRFASAYANLGIA-------LKELGRAIEAEDFLLQAI 149
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ + D+ + + ++ +A+ +YE+ ++ P D Y + L+ K D
Sbjct: 150 RYEPDVAHHYQNLGNVYRNLGRYDDAVALYEKAIQMHPADAMAYQRLTRTFYLMGKLDCC 209
Query: 312 EKQFEKFRRLVPRN 325
+ +++ L P N
Sbjct: 210 VEVLKQWLDLDPDN 223
>gi|167824071|ref|ZP_02455542.1| hypothetical protein Bpseu9_10360 [Burkholderia pseudomallei 9]
Length = 1240
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 42/216 (19%), Positives = 92/216 (42%), Gaps = 15/216 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E+E +I + +A +P+ L +R + A+ R ++L P++ + LL+A++
Sbjct: 640 EREGDIIRSIACDPSFHAGWLNLARIR-RPHDAALALQCARRAVQLAPDDADAVLLRAEL 698
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
G+ + A+ FE + + P E+Y L+ A +++ + + +++A+E K
Sbjct: 699 ALDTGDFDEALSQFERLREQRPDAPESYANLIPALAALERRDDAIAA-LQRALELNSKHP 757
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
+ Q + ++ +A+ + + V + G++Y L+ D AE
Sbjct: 758 GALNNG------VQFYLRTQQYDKAMELAQRYVGAHGELASAHTMCGLVYHNLKAYDRAE 811
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDR 348
+ + P N + + A E+VDR
Sbjct: 812 ASLRRALEIEPHN-------AEALFALGTVLERVDR 840
>gi|168014093|ref|XP_001759590.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689129|gb|EDQ75502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 817
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E+ E ++ + NPN ++AL L + S + A ++ ++I+L+P ++ QL +A
Sbjct: 406 EQAISEFQKAIDLNPNHVDALYNLGGLLKDSLRYERAAEMYQKVIQLKPRDWRAQLNRAV 465
Query: 192 VQSYAGESEAAIKGFEEILR 211
AGE E A K F+E R
Sbjct: 466 SLLGAGEQEEAKKAFKEAFR 485
>gi|39996532|ref|NP_952483.1| hypothetical protein GSU1432 [Geobacter sulfurreducens PCA]
gi|409911957|ref|YP_006890422.1| hypothetical protein KN400_1459 [Geobacter sulfurreducens KN400]
gi|39983413|gb|AAR34806.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298505548|gb|ADI84271.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 573
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 29/263 (11%)
Query: 78 ITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEK--- 134
+ + TVAA LF+ +P A + V A E++ + T D +R +
Sbjct: 1 MNTTTVAALLTLFLVIP----GCATSGAVGALPVNEASFKPTVDIAGSRALYIFARARLQ 56
Query: 135 --EKEIEQHLAANPNDIEA------LQT-LMEVRIKSQKLVEAVDVIDRLIELEPNEFEW 185
E +++ L IEA L T + E+ +K+ + +A+ + I L+P+ +
Sbjct: 57 LLEGDVDGALTLLNGAIEADPGSAYLHTAVAEIYMKTGRAEDALKACENAIRLDPSYRQA 116
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAM 245
+LL + + A+ E+ + DP R EAY L ++Y KL E EK + +
Sbjct: 117 RLLAGAILASLKRDRDAVPHLEKAIELDPSREEAYIHLAVSY----LKLFEYEKAV-NTL 171
Query: 246 ERCKKEKKKSDLRDFKLLIA--QIKVMESKHSEALRVYEELVKEEPRDFRPYLCQ-GIIY 302
+ K K +S L + L A Q+K+ EA Y++ ++ +P DF + + GI+
Sbjct: 172 KSLVKVKPESSLGYYYLGKAYDQMKL----QKEAANYYKKAIELKP-DFEQAIIELGIVQ 226
Query: 303 TLLRKKDEAEKQFEKFRRLVPRN 325
+ DEA ++ + P N
Sbjct: 227 EGMGLHDEAVATYKSLLDINPYN 249
>gi|423334402|ref|ZP_17312181.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
distasonis CL03T12C09]
gi|409225593|gb|EKN18511.1| pentatricopeptide repeat domain-containing protein [Parabacteroides
distasonis CL03T12C09]
Length = 321
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 7/178 (3%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
D E + L+ + L +A DV++R++E+EP+ +L + + + I
Sbjct: 61 DFETMSYLVSAYTMANDLGKAEDVLNRMVEMEPDHIATRLTRVNLLFMLDKDAEVITDCL 120
Query: 208 EILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQI 267
++ +P AY + A K N+V I + + K D D LL A+I
Sbjct: 121 HVIELEPSNHVAYFMMAKA----KKATNDVFGAI---ADLTRSISLKEDFADSYLLRAEI 173
Query: 268 KVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + EAL E+ ++ P + YL +G I+ L + A F++ L P N
Sbjct: 174 LLGLGQAKEALPDVEKAIEIVPEEESSYLLRGRIHMALGDIEAANSDFQQVLDLNPFN 231
>gi|239905482|ref|YP_002952221.1| hypothetical protein DMR_08440 [Desulfovibrio magneticus RS-1]
gi|239795346|dbj|BAH74335.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 1619
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 121 DTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP 180
+ +SA+ D Y E + E LA +P D E L+ E ++ L + R++EL+P
Sbjct: 804 EASSAQGD--YREAIRLAEVGLARSPKDRELLRLAAEAAEFAKNLPACEGYVRRVLELDP 861
Query: 181 NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR 240
+ Q + +V + A + F+ IL K+P ++ + GL+ Y S K + +
Sbjct: 862 DSLTMQNMLGRVLLDQEKFPEAEEHFQAILAKNPHQLSSLRGLLSVYQLSGKA--DKAYK 919
Query: 241 IEKAMERCKKEKKKSDLR 258
+ KA+ + + L+
Sbjct: 920 VAKALREAAPDDASAQLK 937
>gi|428206466|ref|YP_007090819.1| hypothetical protein Chro_1425 [Chroococcidiopsis thermalis PCC
7203]
gi|428008387|gb|AFY86950.1| Tetratricopeptide TPR_1 repeat-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 306
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 100/200 (50%), Gaps = 25/200 (12%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLLKAQV-QSYAGES 199
L NPN++EA V + + +A + +++ +L PN+ WQ + V Q G+S
Sbjct: 36 LKINPNNVEAWSGKGLVHLGLNQSQQASESFEKVKQLRPNDPSIWQQIGLTVEQMKGGQS 95
Query: 200 -----EAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
E A+ ++++L + P + ++ G V+ KLN R ++A++ +K
Sbjct: 96 ARLYFEEALSSYDDLLARKPRDIISWTDRGTVLL------KLN----RPQEALDSYQK-A 144
Query: 253 KKSDLRDFKLLIAQ----IKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTL-LRK 307
D+ ++ L+ + + + E+ + +AL Y + K P+D++ + +G++ + L++
Sbjct: 145 IDIDVNFYEALMGKGNTLVLLGENNYLDALIAYNQASKIRPKDYQVWYNRGMLLSQHLKR 204
Query: 308 KDEAEKQFEKFRRLVPRNHP 327
+ EA + F++ +L HP
Sbjct: 205 QGEAIESFDQAIQLRDNFHP 224
>gi|89898762|ref|YP_515872.1| hypothetical protein CF0955 [Chlamydophila felis Fe/C-56]
gi|89332134|dbj|BAE81727.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 335
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ ++ +P+D E +L V + + +EA++ D+++EL+P + K+
Sbjct: 94 EEAVEQYRAYVVLHPDDAECWFSLGGVYHRLGQYIEAIECFDKILELDPWNPQSLYNKSV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + G + AI E + K+PL +A+ + + Y S K + R +A ER
Sbjct: 154 VLTDMGNEKDAIALLETAVSKNPLYWKAW--IKLGYLLSRHKQWD---RATEAYERVV-- 206
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ + DL D + + K AL+ ++E + EE D Y+ G+ + L++
Sbjct: 207 QLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAHMDLKQNQ 264
Query: 310 EAEKQFEK 317
+A F +
Sbjct: 265 QASDAFHR 272
>gi|166154025|ref|YP_001654143.1| hypothetical protein CTL0052 [Chlamydia trachomatis 434/Bu]
gi|166154900|ref|YP_001653155.1| tetratricopeptide repeat protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335225|ref|ZP_07223469.1| TPR repeat-containing protein [Chlamydia trachomatis L2tet1]
gi|339625428|ref|YP_004716907.1| hypothetical protein CTL2C_515 [Chlamydia trachomatis L2c]
gi|165930013|emb|CAP03496.1| tetratricopeptide repeat protein [Chlamydia trachomatis 434/Bu]
gi|165930888|emb|CAP06450.1| tetratricopeptide repeat protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339460931|gb|AEJ77434.1| tetratricopeptide repeat family protein [Chlamydia trachomatis L2c]
gi|407651135|gb|AFU23887.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|407651139|gb|AFU23890.1| TPR-motif-containing protein [Chlamydia trachomatis]
gi|440526498|emb|CCP51982.1| lipoprotein NlpI [Chlamydia trachomatis L2b/8200/07]
gi|440536322|emb|CCP61835.1| lipoprotein NlpI [Chlamydia trachomatis L2b/795]
gi|440537216|emb|CCP62730.1| lipoprotein NlpI [Chlamydia trachomatis L1/440/LN]
gi|440538105|emb|CCP63619.1| lipoprotein NlpI [Chlamydia trachomatis L1/1322/p2]
gi|440538995|emb|CCP64509.1| lipoprotein NlpI [Chlamydia trachomatis L1/115]
gi|440539884|emb|CCP65398.1| lipoprotein NlpI [Chlamydia trachomatis L1/224]
gi|440540775|emb|CCP66289.1| lipoprotein NlpI [Chlamydia trachomatis L2/25667R]
gi|440541663|emb|CCP67177.1| lipoprotein NlpI [Chlamydia trachomatis L3/404/LN]
gi|440542551|emb|CCP68065.1| lipoprotein NlpI [Chlamydia trachomatis L2b/UCH-2]
gi|440543442|emb|CCP68956.1| lipoprotein NlpI [Chlamydia trachomatis L2b/Canada2]
gi|440544333|emb|CCP69847.1| lipoprotein NlpI [Chlamydia trachomatis L2b/LST]
gi|440545223|emb|CCP70737.1| lipoprotein NlpI [Chlamydia trachomatis L2b/Ams1]
gi|440546113|emb|CCP71627.1| lipoprotein NlpI [Chlamydia trachomatis L2b/CV204]
gi|440914375|emb|CCP90792.1| lipoprotein NlpI [Chlamydia trachomatis L2b/Ams2]
gi|440915265|emb|CCP91682.1| lipoprotein NlpI [Chlamydia trachomatis L2b/Ams3]
gi|440916157|emb|CCP92574.1| lipoprotein NlpI [Chlamydia trachomatis L2b/Canada1]
gi|440917050|emb|CCP93467.1| lipoprotein NlpI [Chlamydia trachomatis L2b/Ams4]
gi|440917941|emb|CCP94358.1| lipoprotein NlpI [Chlamydia trachomatis L2b/Ams5]
Length = 335
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P DIE L +L + + EA+ DR+ +L+P + KA + S + E AI
Sbjct: 107 HPEDIECLFSLGSAYHRLLRYEEAIACFDRIAQLDPWNPQGLYNKAVILSDMEDEEGAID 166
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
E ++++PL +A+ L G N++ R +A ER + + DL D +
Sbjct: 167 LLESTVKRNPLYWKAWVKL-----GYLLSRNKIWDRATEAYERVV--QLRPDLSDGHYNL 219
Query: 265 AQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL- 321
+ K AL+ ++E L+ E D Y+ G+ + L++ ++A F +R L
Sbjct: 220 GLCYLTLDKTRLALKAFQESLLLNAEDADAHFYI--GLAHMDLKQNEQAYDAF--YRALG 275
Query: 322 VPRNHPYREYFVDNMVATKIFGEKVDRE 349
+ +H Y + + + EK ++E
Sbjct: 276 INLDHERSHYLLGYLHHMQGESEKAEKE 303
>gi|91201109|emb|CAJ74168.1| hypothetical protein kuste3406 [Candidatus Kuenenia
stuttgartiensis]
Length = 610
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P+ EA + K EA+ D+ +E++P+ K V + G+ EA++K
Sbjct: 94 PDYWEAWYMKGRASDHTGKYYEAIKAFDKALEIKPDALMVLYNKGNVHDHIGDIEASVKT 153
Query: 206 FEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLL 263
++ IL+ P EA++ GL +A + ++ A+E + + + + ++
Sbjct: 154 YDSILKLKPDEYEAWNNKGLALA---------RIPEKRGIALEAYDQAIRINPVY-YEAW 203
Query: 264 I--AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
I V ++ EA+ Y+ +K P++ + +G + K +EA F K L
Sbjct: 204 INKGNCFVRLRRYGEAIDAYDTAIKIRPKEHAAWANKGFTLADMGKHEEAVDAFNKAIEL 263
Query: 322 VPRNH 326
P ++
Sbjct: 264 SPGSY 268
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 78/185 (42%), Gaps = 7/185 (3%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
+Q + NP EA ++ ++ EA+D D I++ P E K + G+
Sbjct: 190 DQAIRINPVYYEAWINKGNCFVRLRRYGEAIDAYDTAIKIRPKEHAAWANKGFTLADMGK 249
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
E A+ F + + P A++G +A D S + + K EK +E +
Sbjct: 250 HEEAVDAFNKAIELSPGSYAAWNGKGLALD-SLSRYEDALKAYEKTIEI--QPDSYGAWT 306
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+ L ++++K +H EA+ YE+ + +P + +G L EA K F++
Sbjct: 307 NMGLTLSRLK----RHDEAVAAYEKALIIQPDSYETMTNKGCELFHLGNYVEAIKAFDRA 362
Query: 319 RRLVP 323
L P
Sbjct: 363 IELQP 367
>gi|421120024|ref|ZP_15580338.1| tetratricopeptide repeat protein [Leptospira interrogans str. Brem
329]
gi|410347110|gb|EKO98029.1| tetratricopeptide repeat protein [Leptospira interrogans str. Brem
329]
Length = 284
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 100/232 (43%), Gaps = 7/232 (3%)
Query: 86 AALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAAN 145
+ ++F+R F K + + A+ T E+ E K A E +Y +E ++L
Sbjct: 42 SVVIFIR-EFLWGKASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLV 100
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PND A V ++ +AV ++ +E++P++ L K + + AI+
Sbjct: 101 PNDASAYYNRGLVHYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIED 160
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIA 265
FE+ + + +G + K +E + KA+ KK+ F+L A
Sbjct: 161 FEKAISLGENKNAELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYA 216
Query: 266 QIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Q + K+S+++ Y ++++ P D + +G+ L K A K F++
Sbjct: 217 QYGL--KKYSDSVESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 266
>gi|329963059|ref|ZP_08300839.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328529100|gb|EGF56030.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 319
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE E + NP + +A L ++ I +KL EA+ + D IEL PN E +
Sbjct: 213 EEAENDYRNVTELNPFNEQAFLYLGQLYITQKKLAEAIALFDEAIELNPNFAEAYHERGH 272
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
+ G+ E +I+ ++ L +P V++++G
Sbjct: 273 AKLLNGDKEGSIEDMKKGLELNPKDVQSFNG 303
>gi|410938632|ref|ZP_11370476.1| tetratricopeptide repeat protein [Leptospira noguchii str.
2006001870]
gi|410786300|gb|EKR75247.1| tetratricopeptide repeat protein [Leptospira noguchii str.
2006001870]
Length = 363
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 228 KDIRLLFGTALLYNGKAKDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKW 287
Query: 318 FRRLVP 323
LVP
Sbjct: 288 ANSLVP 293
>gi|384207926|ref|YP_005593646.1| hypothetical protein Bint_0432 [Brachyspira intermedia PWS/A]
gi|343385576|gb|AEM21066.1| TPR domain-containing protein [Brachyspira intermedia PWS/A]
Length = 490
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 98 IKPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLME 157
I P++ + + ++ E ++ +A DV + NP + + L E
Sbjct: 266 INPSLWSIITKFYDKDAGIEQYREIINAYNDV------------MKENPTNNQYYYYLSE 313
Query: 158 VRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
+ ++ +A+++ + IE+ PN++ + + A + E A++ ++++ KD +
Sbjct: 314 LYKDIKEYNKAIELYNYAIEINPNDYNYYISMAALYEDIKEYNKAVEILKKVIEKDSNNI 373
Query: 218 EAYHGLVMAYDGSDKKLNEVEKRIE---KAMERCKKEKKKSDLRDFKLLIAQIKVMESK- 273
EAY L Y+ KLN+++ R E KA+E K + + L ++ +E +
Sbjct: 374 EAYIELGDLYE----KLNKIDDRNEIYKKAIEIYKNDNDAYTFENIGNLYEKLGNIEERN 429
Query: 274 --HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+ +A+ +Y E D Q +Y L K+ A ++K + P N+
Sbjct: 430 RAYKKAIEIY-----NETSDIYHLEKQADLYIKLNDKNNAINSYKKLLEIDPYNN 479
>gi|431921001|gb|ELK18770.1| Intraflagellar transport protein 88 like protein [Pteropus alecto]
Length = 787
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++I ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 617 PSNIGVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 676
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAME 246
+++I RK P E LV +D L EV+ KR+EK E
Sbjct: 677 YKDIHRKFPENAECLRFLVRL--CTDIGLKEVQEYATKLKRLEKMKE 721
>gi|376282693|ref|YP_005156519.1| tetratricopeptide repeat protein [Chlamydia trachomatis A2497]
gi|385270407|ref|YP_005813567.1| hypothetical protein [Chlamydia trachomatis A2497]
gi|347975547|gb|AEP35568.1| Tetratricopeptide repeat family protein [Chlamydia trachomatis
A2497]
gi|371908723|emb|CAX09355.1| tetratricopeptide repeat protein [Chlamydia trachomatis A2497]
gi|438690621|emb|CCP49878.1| lipoprotein NlpI [Chlamydia trachomatis A/7249]
gi|438691706|emb|CCP48980.1| lipoprotein NlpI [Chlamydia trachomatis A/5291]
gi|438693079|emb|CCP48081.1| lipoprotein NlpI [Chlamydia trachomatis A/363]
Length = 335
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P DIE L +L + + EA+ DR+ +L+P + KA V S + E AI
Sbjct: 107 HPEDIECLFSLGSAYHRLLRYEEAIACFDRITQLDPWNPQGLYNKAVVLSDMEDEEGAID 166
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
E ++++PL +A+ L G N++ R +A ER + + DL D +
Sbjct: 167 LLESTVKRNPLYWKAWVKL-----GYLLSRNKIWDRATEAYERVV--QLRPDLSDGHYNL 219
Query: 265 AQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLV 322
+ K AL+ ++E L+ E D Y+ G+ + L++ ++A ++ F R +
Sbjct: 220 GLCYLTLDKTRLALKAFQESLLLNAEDADAHFYI--GLAHMDLKQNEQA---YDAFYRAL 274
Query: 323 PRN 325
N
Sbjct: 275 GIN 277
>gi|66361898|ref|XP_627913.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46227572|gb|EAK88507.1| hypothetical protein, proline rich C-terminus, signal peptide, very
large protein [Cryptosporidium parvum Iowa II]
Length = 2527
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 233 KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF 292
K+N+V K I ++CK E K+ + LL +I +SK+ Y++L+K+ +F
Sbjct: 1186 KINKVRKNIHNKYKKCKTELSKAKKSFYSLLKGEISKQKSKNKMDSESYKDLLKKIQGEF 1245
Query: 293 RPYL-----CQGIIYTLLRKKD 309
+ Y CQGI+ LRK+D
Sbjct: 1246 KKYRRLEKKCQGIMVN-LRKED 1266
>gi|308804756|ref|XP_003079690.1| stress-induced protein sti1-like protein (ISS) [Ostreococcus tauri]
gi|116058146|emb|CAL53335.1| stress-induced protein sti1-like protein (ISS) [Ostreococcus tauri]
Length = 621
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 128 DVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL 187
D + E KE + +A NP D +A K EA+ ++ IELEP +
Sbjct: 445 DQKFPEAVKEYTEAIARNPKDHKAYSNRAASYTKLTAFNEALKDAEKCIELEPTFVKGYA 504
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD----GSDKKLNEVE--KRI 241
K VQ + E + A+ + E L+ DP E GL + G+ +L+E E R
Sbjct: 505 RKGAVQFFVKEYDDAMTTYSEGLKHDPTNEELRDGLRRCQEQISRGASGQLSEEEMKARQ 564
Query: 242 EKAM 245
E+AM
Sbjct: 565 ERAM 568
>gi|94967941|ref|YP_589989.1| hypothetical protein Acid345_0912 [Candidatus Koribacter versatilis
Ellin345]
gi|94549991|gb|ABF39915.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 748
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN--EFEWQLL 188
+++ KE +Q L NP ++A+ L +R++ + EA ++ +I+ +PN + +QL
Sbjct: 624 FDDAAKEFQQELEVNPQSVQAMYQLAYIRMQQHQAPEASSLLSEVIKQQPNNSDAHYQLG 683
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
KA ++ G++ A + E ++ P AY L AY
Sbjct: 684 KALLEQ--GDAGGATRELETSVKLHPTDY-AYFQLSHAY 719
>gi|45656241|ref|YP_000327.1| hypothetical protein LIC10337 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599475|gb|AAS68964.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 369
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 234 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKW 293
Query: 318 FRRLVP 323
LVP
Sbjct: 294 ANSLVP 299
>gi|330509113|ref|YP_004385541.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929921|gb|AEB69723.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 462
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 10/201 (4%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+YE+ + +Q + N D +A V + + EA + D + EL+P ++ K
Sbjct: 115 AYEKALEVFDQRIERNQLDADAWMGRANVLLNLGRWDEAHEAYDEVTELKPQDYNVWWRK 174
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
A+V S G+ +++ ++ + P L +AY + L V+ R E A+E
Sbjct: 175 AEVISGIGDINESVEAYDRAIGLIP--ANDTDELALAYASKSENLASVD-RWEDALEAVN 231
Query: 250 K----EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
K + S FK I + ++ K EAL + E + + P D + + + +
Sbjct: 232 KSLELNPRSSTWWHFKAFI--LTELDRKE-EALAAFNEAIGQNPEDIGNWQWKASLLVEM 288
Query: 306 RKKDEAEKQFEKFRRLVPRNH 326
++ +E+ + ++K L N+
Sbjct: 289 KRYNESLEAYDKAIELAAENN 309
>gi|223937047|ref|ZP_03628955.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
gi|223894328|gb|EEF60781.1| Tetratricopeptide TPR_2 repeat protein [bacterium Ellin514]
Length = 340
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 11/187 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y++ KE+ + + NP D A V + +A+ I L P+ +A
Sbjct: 49 YDQAVKELTREIENNPKDEWAYACRAYVFSEMTNYDKALSDYTAAIALNPHNCTNYFRRA 108
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERC 248
V G+ I F + +++DP AY GLV A + E + ++ E
Sbjct: 109 YVYLRKGDWTNEISDFNKCIQEDPEYFTAYVDRGLVYA------ERKEFDHAMDDFNEAL 162
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + + + + ++ A I + + +AL+ VK PR PY +G +Y+ + +
Sbjct: 163 RLKPRSAMVYAYR---AGIYAARTNYDDALKDCNTAVKLSPRWSMPYNRRGALYSTMGRD 219
Query: 309 DEAEKQF 315
DEA K F
Sbjct: 220 DEALKDF 226
>gi|455788572|gb|EMF40540.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Lora str. TE 1992]
Length = 369
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 234 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKW 293
Query: 318 FRRLVP 323
LVP
Sbjct: 294 ANSLVP 299
>gi|418727431|ref|ZP_13286022.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
12621]
gi|409959246|gb|EKO23020.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
12621]
Length = 369
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 234 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKW 293
Query: 318 FRRLVP 323
LVP
Sbjct: 294 ANSLVP 299
>gi|406905806|gb|EKD47161.1| hypothetical protein ACD_66C00191G0001, partial [uncultured
bacterium]
Length = 729
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
+EE + + LA +PND LQ L ++ E +DR+ + P F + A
Sbjct: 363 FEEAKAIFTKLLAIDPNDQNVLQGLAQIEFTQGNYDECRTHLDRIKAINPQHFGMHWMYA 422
Query: 191 QVQSYAGESEAAIKGFEEILRKDP 214
+ + G++E A + +++IL +P
Sbjct: 423 SLYAETGQTEKAKESYKQILTINP 446
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 119 TKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIEL 178
T + E + YE + + + NP D+ + + + + V A +D+ +++
Sbjct: 521 TMQASLCMEKMDYEAARQYLNRAEILNPIDLNTILSFAQFFMIQGDSVTAQKWLDKTLQI 580
Query: 179 EPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD-GSDKKLNEV 237
PN+ LK V + + AI ++ L +P EA+ L +AY L
Sbjct: 581 NPNQPATLALKGLVFCNTAQYDEAIATAKQALTVNPNSYEAHTTLFVAYSLLGQTDLATA 640
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLC 297
E++I +A E + R L AQ K E++ VYE ++ +P L
Sbjct: 641 EEKILRAF---SPENQWYLARLAMALKAQ-----QKFKESIEVYERILTAKPGFLFATLA 692
Query: 298 QGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
YT+ + +A+K +E+ + P N
Sbjct: 693 LADTYTVWGRTRKAKKAYERALVIEPDN 720
>gi|313680127|ref|YP_004057866.1| tetratricopeptide tpr_1 repeat-containing protein [Oceanithermus
profundus DSM 14977]
gi|313152842|gb|ADR36693.1| Tetratricopeptide TPR_1 repeat-containing protein [Oceanithermus
profundus DSM 14977]
Length = 364
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 42/209 (20%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
++ E +Q LA P+D L +V + KL EA+D++ + + L+P + QLL +
Sbjct: 166 DKAEAAFKQALAIAPDDAVVRYNLAQVYLSQGKLDEALDMLAQGVALDPASAQLQLLYGK 225
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V A+KG +L E E+ + KA E
Sbjct: 226 V--------LAVKG---------------------------RLVEAEQALAKATELAPLN 250
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF-RPYLCQGIIYTLLRKKDE 310
L + Q+ +E K +EA+ ++ ++ +P F Y G + D+
Sbjct: 251 ASTW------LNLGQVYYLEKKFAEAIDTLDKAIELDPLGFPEAYFYLGRSHLEAGHVDD 304
Query: 311 AEKQFEKFRRLVPRNHPYREYFVDNMVAT 339
A K +L P N Y + ++A
Sbjct: 305 ARLNLTKAIKLAPDNADYHYWLARALIAA 333
>gi|145347406|ref|XP_001418158.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578387|gb|ABO96451.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 565
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 128 DVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL 187
D + E KE + +A NPND +A K EA+ ++ IELEP +
Sbjct: 389 DQKFPEAVKEYSEAIARNPNDHKAYSNRSASYTKLAAFNEALKDAEKCIELEPTFAKGYT 448
Query: 188 LKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYD----GSDKKLNEVE--KRI 241
K VQ + + A++ + E L+ DP E GL ++ G+ +L+E E R
Sbjct: 449 RKGHVQFFTKSYDDAVETYTEGLKHDPNNEELKDGLRRCHEQINRGAMGQLSEEEMKARQ 508
Query: 242 EKAM 245
E+AM
Sbjct: 509 ERAM 512
>gi|428301131|ref|YP_007139437.1| hypothetical protein Cal6303_4565 [Calothrix sp. PCC 6303]
gi|428237675|gb|AFZ03465.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 6303]
Length = 520
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/88 (21%), Positives = 53/88 (60%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E +++ + ++ NP+ ++AL L R + +L A+ + + +++ P++ + +A
Sbjct: 290 YDEAIRDLVKVVSLNPHHLQALHKLGLARYQGGELENAIALFTQALQINPHDARIYVHRA 349
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVE 218
+V+S G+++ AI+ + + ++ +P+ E
Sbjct: 350 EVRSRLGDNQGAIEDYHQAMKLNPIIAE 377
>gi|406892382|gb|EKD37746.1| hypothetical protein ACD_75C01012G0001 [uncultured bacterium]
Length = 759
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 155 LMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
L ++ +K Q+ EA+ ++ EL P + + +L+A++ G+SE ++ + E+L P
Sbjct: 544 LGDLYLKKQQNEEALQAFEKAQELSPADPQGYILRARLLHLMGKSEESVAQYNELLTNQP 603
Query: 215 LRVEAYHGLVMAYDGSDKKLNEVEK 239
+ A GL AY+ K +EK
Sbjct: 604 KSIAALMGLATAYESQGKSAEAMEK 628
>gi|443669329|ref|ZP_21134557.1| kinase domain protein [Microcystis aeruginosa DIANCHI905]
gi|443330393|gb|ELS45113.1| kinase domain protein [Microcystis aeruginosa DIANCHI905]
Length = 754
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +++L+ + N+ + K
Sbjct: 465 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGW 524
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G+ +LN++ +E + +
Sbjct: 525 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQF 579
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q ++SEAL + + K ++ +L QG + L + E
Sbjct: 580 NPQFSQAHYSQGIILQ---KLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQE 636
Query: 311 AEKQFEKFRRLVPR 324
A +EK RR+ R
Sbjct: 637 AIASYEKARRISSR 650
>gi|39996268|ref|NP_952219.1| hypothetical protein GSU1166 [Geobacter sulfurreducens PCA]
gi|409911709|ref|YP_006890174.1| hypothetical protein KN400_1143 [Geobacter sulfurreducens KN400]
gi|39983148|gb|AAR34542.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298505281|gb|ADI84004.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 266
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E ++ E+ LA P D++ L ++ ++ + A+ R +EL+P + + V
Sbjct: 57 EARQQYEKGLALAPGDVDGQIALGDICLELAEHEAALAAYRRAVELDPRNADGYVNIGLV 116
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
+ E+ AI+ FE+ L DP V AY+GL A+ G L E EK I+
Sbjct: 117 YNSLEETSKAIEAFEKALEIDPANVFAYNGLGDAWYG----LGEREKAID 162
>gi|390958719|ref|YP_006422476.1| hypothetical protein Terro_2906 [Terriglobus roseus DSM 18391]
gi|390413637|gb|AFL89141.1| tetratricopeptide repeat protein [Terriglobus roseus DSM 18391]
Length = 474
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 167 EAVDVIDRLIELEPNEFEWQL-LKAQVQSYAGESEAAIKGFEEILRKDPLR--VEAYHGL 223
E+V V+ R + P++ L L S ++EAAI+ F +P + Y+G+
Sbjct: 289 ESVRVLLRGADASPSDARCYLYLSKAYLSAPSQAEAAIEHFRRYAELEPRNGLAQFYYGM 348
Query: 224 VMAYDGSDKKLNEVEK-RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYE 282
+ + G+ + V+ +E +++ K L D L + + + ++ +AL YE
Sbjct: 349 SL-WKGNRQGTTGVDYPAVEALLQKATTLNDK--LADAHLQLGILYTEQREYEKALPQYE 405
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++ +P + G Y KD+AE +F++F+RL +NH
Sbjct: 406 RALQLDPLSSDAHFRMGRYYLHAGLKDKAENEFDQFKRLQAQNH 449
>gi|260222438|emb|CBA32002.1| hypothetical protein Csp_D29940 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 598
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
EA+++ DR ++++P+ + + AG+S AI+ + + L P +++HGL +A
Sbjct: 98 EALELYDRALDIQPDFAQAWGNRGNALRDAGQSLQAIESYRKALALQPGYAQSWHGLGLA 157
Query: 227 YDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
Y+ + + V+ + C+ + + L D + +++ E EAL Y++ V
Sbjct: 158 YNDLKQWQDAVDAFTQALF--CQADMTVACL-DMGNALRELERFE----EALAAYDKAVD 210
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVDNMV-ATKIFGEK 345
P + +G++ + + EA + ++K L P F+D +V + + E
Sbjct: 211 LRPSYAEAWSNRGVLLKRMGRMQEALQSYQKAIALEPD-------FIDALVNCSTLLKEM 263
Query: 346 VDRE-SMA 352
+D + SMA
Sbjct: 264 MDLDASMA 271
>gi|119488074|ref|ZP_01621518.1| TPR repeat protein [Lyngbya sp. PCC 8106]
gi|119455363|gb|EAW36502.1| TPR repeat protein [Lyngbya sp. PCC 8106]
Length = 759
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE-FEWQLLKAQ 191
E E++ +Q LA +A + L + ++ EA+D +EL+ + ++ L
Sbjct: 20 EAEEKYQQILALENTHADAWRELGAIYFFQERYPEALDAFYSALELDSSTAIQYYYLGLG 79
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCK 249
+ + + AAI +E+ + DP +AYH G V G + N+ E KA++
Sbjct: 80 LAA-TEDFTAAISAYEQAILLDPNWSDAYHQLGGVCLELG---QFNQAETYYRKAIDL-- 133
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ KKSD F L + + + + + EA+ Y++ ++ + +++ + G +T L+K
Sbjct: 134 -DSKKSD---FYLDLGNLLIAKQQIEEAIEFYQKGLQFDSENYQIFYQLGNAFTTLKKSS 189
Query: 310 EA 311
+A
Sbjct: 190 QA 191
>gi|365899853|ref|ZP_09437735.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365419376|emb|CCE10277.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 183
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP D A I Q A+ +D + L P+ E + + + ESE AI
Sbjct: 79 NPKDASAFNNRGAAMIYVQNYERAIQDLDDAVRLNPSYSEAFMNRGLAHARLRESERAIA 138
Query: 205 GFEEILRKDPLRVEAYHGLVMAY 227
F E +R DP A+H +AY
Sbjct: 139 DFTEAIRIDPRNAVAFHNRGVAY 161
>gi|389580267|ref|ZP_10170294.1| cytochrome c biogenesis factor [Desulfobacter postgatei 2ac9]
gi|389401902|gb|EIM64124.1| cytochrome c biogenesis factor [Desulfobacter postgatei 2ac9]
Length = 763
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 7/179 (3%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P +IEAL L +KL E ID +++ +P + LK QV + E
Sbjct: 94 DPENIEALVKLSRFYFLDKKLPETQARIDNILKKDPQNLDALFLKGQVLIRKNQIEDGRI 153
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
FE+IL V A H + A KK +E E + KA+E K D + ++
Sbjct: 154 VFEKILEIQNSHVGALHAMA-AIKAGQKKFDEAEAFLLKAVESGK------DTTTPRNVL 206
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
AQ ++ + +A E P + + G Y + EAE F+K + P
Sbjct: 207 AQFYILRKQLDKAEEQLHLSAAEHPENPGHQILLGNFYLRTKNFQEAETAFKKAVEIQP 265
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 99/199 (49%), Gaps = 14/199 (7%)
Query: 132 EEKEKEIEQH---LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL 188
++K+K +E + A + D + L K +K+ EA +++ +++ P + ++L
Sbjct: 282 DQKDKALELYRKAAALDSEDSNSQMILARFLYKEKKIDEAENLVAGILKKRPKLPDARML 341
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDP--LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
K+++ + + + A+ + +++P RV+ + GL +Y G + N+ + KA+E
Sbjct: 342 KSEILIFQKKYQDALNILIALEKEEPNAHRVQYFKGL--SYIGIGEP-NQAASALVKAVE 398
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
K + +LL+++I + + + A+ ++K +P+ +R Y+ +G Y L+
Sbjct: 399 L------KPEYTQARLLMSEIYLRQHAYDLAVNQTTAVIKLDPKIYRAYMLRGNAYVALK 452
Query: 307 KKDEAEKQFEKFRRLVPRN 325
K EAE ++K + N
Sbjct: 453 KIKEAEDDYKKMIEIGSDN 471
>gi|428178573|gb|EKX47448.1| hypothetical protein GUITHDRAFT_106889 [Guillardia theta CCMP2712]
Length = 847
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P D+E + L +KS+ +A++ + +++P E +W+L+ A G + A++
Sbjct: 643 PVDMEVISWLGAYFVKSEMYEKAMEYFQKAAQIQPKEVKWRLMVASCYRRIGSYQLALRT 702
Query: 206 FEEILRKDPLRVEAYHGLV 224
+EEI + P +E + LV
Sbjct: 703 YEEIEKSHPDNLECLNYLV 721
>gi|383452367|ref|YP_005366356.1| hypothetical protein COCOR_00348 [Corallococcus coralloides DSM
2259]
gi|380727426|gb|AFE03428.1| hypothetical protein COCOR_00348 [Corallococcus coralloides DSM
2259]
Length = 395
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 118 STKDTTSAREDVSYEEKE-----KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVI 172
+T +T R +++ ++ + K + LAA PN EA + IK K +A++ +
Sbjct: 62 ATAETGLVRANIAAQKGQLDAALKAYQGVLAAEPNRAEAHFGKGMMLIKQDKAPQALEAL 121
Query: 173 DRLIELEPNE--FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS 230
+ L P F ++L QVQ AG+++A + E+L P V AY L A
Sbjct: 122 SQAARLAPQNPVFRYRL--GQVQLEAGQTDAGLATLREVLTLAPRFVPAYLSLSHALSAQ 179
Query: 231 DKKLNEVEKRIEKAME 246
D KL + K +E+ ++
Sbjct: 180 D-KLVDARKVLEQGLK 194
>gi|425457221|ref|ZP_18836927.1| Similar to tr|Q7NMJ3|Q7NMJ3 [Microcystis aeruginosa PCC 9807]
gi|389801488|emb|CCI19347.1| Similar to tr|Q7NMJ3|Q7NMJ3 [Microcystis aeruginosa PCC 9807]
Length = 251
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 165 LVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV 224
V++++ + + ++L PN + +++ Q A + AA EE ++ P V AY+ L
Sbjct: 69 FVKSIEALKKSVQLNPNHLDGRVILGWTQHLAKQPLAAQTTLEETIKIAPDHVAAYNALG 128
Query: 225 MAYDGSDKKLNEVEKRIEKAM---ERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
+ Y V +EKA+ + K +++ + L +A ++ + A+
Sbjct: 129 IVY--------LVGGHLEKAVVTHTKAANLKPDNEIAYYNLSLAYHRLKD--FDSAINNA 178
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE-YFVDNM 336
++ VK EP + P + +IY +A+ + K R L R YR+ +F+ ++
Sbjct: 179 KKAVKLEPNNPHPLVALAMIYLDQGDSKKAQDTYRKARNLDSR---YRQKWFLAHL 231
>gi|66808175|ref|XP_637810.1| DNAJ heat shock N-terminal domain-containing protein [Dictyostelium
discoideum AX4]
gi|74897000|sp|Q54M21.1|DNJC3_DICDI RecName: Full=DnaJ homolog subfamily C member 3 homolog; Flags:
Precursor
gi|60466239|gb|EAL64301.1| DNAJ heat shock N-terminal domain-containing protein [Dictyostelium
discoideum AX4]
Length = 502
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
K + A+ ++R IE P+ +L +A++QS G E A+ ++ +L+ P +A +
Sbjct: 84 KNILALSDLNRAIEANPDNIHARLKRAKIQSSLGRFEEAMDEYKRVLKIRPDNSQAKQQI 143
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKK--------------SDLRDFKLLIAQIKV 269
+KL +VE+++EK + K EK SDL++ +L++ +
Sbjct: 144 --------EKLKKVEQQLEKVRDMVKVEKNYKDSIAILLDIQSVVSDLKEVRLMLCECFF 195
Query: 270 MESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYR 329
+ H + L ++K EP +G + + +K+ A K ++ + P N R
Sbjct: 196 QQGDHRKVLDETMTILKSEPSSVAALYWRGKTFFSMGEKEIAMKFLKEGLKFDPDNTNCR 255
>gi|357406309|ref|YP_004918233.1| hypothetical protein MEALZ_2982 [Methylomicrobium alcaliphilum 20Z]
gi|351718974|emb|CCE24648.1| exported protein of unknown function [Methylomicrobium alcaliphilum
20Z]
Length = 801
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ EQ L P+ +EAL E +K + +A D+ +++ +P + ++
Sbjct: 47 YEQALAAFEQALELKPDQVEALFESAETSVKLGNVQQAADLYRQVVNADPKHLKARVKLG 106
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEA--------YHGLVMAYDGSDKKLNEVEKRIE 242
Q+ AG+ + A E L K L ++A G++ A + SD + + E +
Sbjct: 107 QIYLLAGQVQEA-----ETLMKQALAIDAESPDALVLQAGILAAQNSSDAAIVKAEAAL- 160
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
K+ D+ LL+A +K K +A+ + P D L +Y
Sbjct: 161 --------AKRPGDVPAV-LLLASLKAKSGKLDQAIEFVRGYADQNPDDTSLRLMLVNLY 211
Query: 303 TLLRKKDEAEKQFEKFRRLVPR 324
+ D+AEK E ++ P+
Sbjct: 212 VKTQAFDKAEKTLENIIKIEPK 233
>gi|441497885|ref|ZP_20980093.1| TPR repeat containing protein [Fulvivirga imtechensis AK7]
gi|441438451|gb|ELR71787.1| TPR repeat containing protein [Fulvivirga imtechensis AK7]
Length = 467
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 9/167 (5%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P E + T +V ++ EA+D++D+ +PN+ E LK + S + EAAI+
Sbjct: 62 PFSTELIITKAQVLTNLEEYEEALDLLDKAESFQPNDSEIYFLKGSIYSLQAQYEAAIET 121
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLL-I 264
+ + L E Y+ + +AY +K ++A++ K +++ D L +
Sbjct: 122 YFQALPFAEDTDEVYYSIGLAYQSMEK--------YQEAIDAYKNAIEENIFHDGALYEL 173
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
A + + ++ Y++ + +P + GI+Y L + DEA
Sbjct: 174 AYCLDICGELESSISYYKKFIDADPYSQAAWYNLGIVYNKLGRFDEA 220
>gi|421874419|ref|ZP_16306024.1| conserved hypothetical protein [Brevibacillus laterosporus GI-9]
gi|372456649|emb|CCF15573.1| conserved hypothetical protein [Brevibacillus laterosporus GI-9]
Length = 355
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
EK +++ + +P ++E L + +K+ EAV + +++ +PN FE LL
Sbjct: 67 EKNLKEASSLDPFNMELKFYLASTLVFQKKVEEAVGIYKQIVNFQPNHFEANLLYGVYSK 126
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDG 229
G+ K + + DP R A+ + A DG
Sbjct: 127 VNGDEATYQKSMAALQKIDPQRAAAFQAKLQAADG 161
>gi|339010440|ref|ZP_08643010.1| hypothetical protein BRLA_c42650 [Brevibacillus laterosporus LMG
15441]
gi|338772595|gb|EGP32128.1| hypothetical protein BRLA_c42650 [Brevibacillus laterosporus LMG
15441]
Length = 355
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
EK +++ + +P ++E L + +K+ EAV + +++ +PN FE LL
Sbjct: 67 EKNLKEASSLDPFNMELKFYLASTLVFQKKVEEAVGIYKQIVNFQPNHFEANLLYGVYSK 126
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDG 229
G+ K + + DP R A+ + A DG
Sbjct: 127 VNGDEATYQKSMAALQKIDPQRAAAFQAKLQAADG 161
>gi|296109838|ref|YP_003616787.1| TPR repeat-containing protein [methanocaldococcus infernus ME]
gi|295434652|gb|ADG13823.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
Length = 304
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E + + + + NP +I AL + +V I K+ +A + +++ +EL P + +L
Sbjct: 187 YDEAIEYLCKIIKINPCNIRALTKISKVLITIGKITKAKEFLEKALELNPKDPALYILYG 246
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
V + G+ + AI+ F++ L +P VEA++G +A + KL +E+ +E
Sbjct: 247 IVLNKLGKYDKAIEYFDKALSINPNLVEAWNGKGLALE----KLGRLEEALE 294
>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 2315
Score = 40.0 bits (92), Expect = 1.7, Method: Composition-based stats.
Identities = 52/256 (20%), Positives = 108/256 (42%), Gaps = 36/256 (14%)
Query: 108 AAATVESTNESTKDTTS-----AREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKS 162
A VE N + TS + D +++ + + + +L N + L + +K
Sbjct: 1743 AEEVVEVINPYLEQYTSIWYSLKKADQNFQTIQIKDQNNLQENTESYQYLVDKGRLYLKQ 1802
Query: 163 QKLVEAVDVIDRLIELEP-NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
KL EA ++ ++ P ++ L G+ + A++ F E L+ +PL+V+ Y+
Sbjct: 1803 GKLEEAQNLFQLALKYYPKTDYLSHHLLGFTFYQQGKFQDALQKFNESLQINPLQVDIYN 1862
Query: 222 GLVMAYDGSDKKLNEVEKRIEKAME--------------------RCKKEKKKSDLRDFK 261
+ YD + K ++ K+ +KA+E KE + +
Sbjct: 1863 TIGSIYDQQNMK-DQAIKQYQKALEIQPSYYTALLNLGNLYFWDKNMVKEANECFQKALD 1921
Query: 262 LLIAQIKVME---------SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
+ ++V++ ++ EA++ YE+ + +P+D+ + C +Y + +A
Sbjct: 1922 INPNSLQVLKRAALFYYSNNQFQEAIQNYEKALSIDPQDYEIFGCLAQVYHQIGNIQKAI 1981
Query: 313 KQFEKFRRLVPRNHPY 328
K EK + PRNH +
Sbjct: 1982 KILEKAIKQNPRNHQF 1997
>gi|421129965|ref|ZP_15590165.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
2008720114]
gi|410359340|gb|EKP06449.1| tetratricopeptide repeat protein [Leptospira kirschneri str.
2008720114]
Length = 369
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+D +LL + K +AL + E+L E+ D+RP + +G IY L ++AE +
Sbjct: 234 KDIRLLFGTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKW 293
Query: 318 FRRLVP 323
LVP
Sbjct: 294 ANSLVP 299
>gi|311744911|ref|ZP_07718696.1| hypothetical protein ALPR1_00295 [Algoriphagus sp. PR1]
gi|126577414|gb|EAZ81634.1| hypothetical protein ALPR1_00295 [Algoriphagus sp. PR1]
Length = 401
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 17/190 (8%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A N N + + ++ Q+ A++ + + +P + ++ + S G++E A
Sbjct: 146 AQNENPAQVYYHMGLSSMELQEYDNALNFFEEALRFQPGKADFYAEIGRAYSKIGDNELA 205
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSD----KKLNEVEKRIEKAMERCKKEKKKSDLR 258
+ FEE L DP + A G+ G+D K L EV I+ + + K++ R
Sbjct: 206 LAAFEEALSIDPDHLIAKQGIATVKAGNDPDLIKTLTEV---IDDSSANSQTFKQRGYYR 262
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
+ + +AL+ + E +K + D + +G +Y L+ EAEK K
Sbjct: 263 ----------MNNDELEDALKDFSEAIKLDDMDPETFFYRGKVYGKLKNWKEAEKDLSKA 312
Query: 319 RRLVPRNHPY 328
L +N Y
Sbjct: 313 IELDAQNPEY 322
>gi|355570991|ref|ZP_09042261.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354826273|gb|EHF10489.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 1104
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE + + + P++ +A + K + E+ I R+IEL P + + L + +
Sbjct: 559 EEALADFSKAIGMEPSNADAYFQRALILQKQGRFEESASDISRVIELRPADAQAYLFRGR 618
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK- 250
S G S AI F L DP +AY G G ++ RC +
Sbjct: 619 QNSELGNSSEAIADFSRALEIDPRLFDAYIGR-----GQERS-------------RCGQP 660
Query: 251 EKKKSDLRD-FKLLIAQIKVMESKHSEALRV--YEELVKE-------EPRDFRPYLCQGI 300
EK D + +L ++ + ++ +E R+ YE+ V++ P D L +G+
Sbjct: 661 EKAVEDYSNAIRLNGRSVEALTARATEYSRLGRYEDAVEDLSRALEQAPGDVSILLARGL 720
Query: 301 IYTLLRKKDEAEKQFEKFRRLVP 323
+Y L DEA + K + P
Sbjct: 721 LYERLGMIDEAIADYSKVIEIDP 743
>gi|440752107|ref|ZP_20931310.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440176600|gb|ELP55873.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 1254
Score = 40.0 bits (92), Expect = 1.8, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE----FEWQLLKAQVQSY 195
Q + +P ++ L + + +L EA+ + IE +P+ + L+ Q++
Sbjct: 1006 QAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLGLVYEQLK-- 1063
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
E+E AI + ++ D VE Y L YD E + EK RC +
Sbjct: 1064 --ETEKAIACYSHSVQLDSTNVEVYKSLAQLYD-----RQENYAKAEKYY-RCALLLQPH 1115
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+L + + + + + K +A+ ++++++ +P+D YL GI Y + +A+ F
Sbjct: 1116 NL-ELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCF 1174
Query: 316 EKFRRLVP 323
EK L P
Sbjct: 1175 EKAIELDP 1182
>gi|159028889|emb|CAO90694.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 1271
Score = 40.0 bits (92), Expect = 1.8, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE----FEWQLLKAQVQSY 195
Q + +P ++ L + + +L EA+ + IE +P+ + L+ Q++
Sbjct: 1023 QAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLGLVYEQLK-- 1080
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
E+E AI + ++ D VE Y L YD E + EK RC +
Sbjct: 1081 --ETEKAIACYSHSVQLDSTNVEVYKSLAQLYD-----RQENYAKAEKYY-RCALLLQPH 1132
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+L + + + + + K +A+ ++++++ +P+D YL GI Y + +A+ F
Sbjct: 1133 NL-ELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCF 1191
Query: 316 EKFRRLVP 323
EK L P
Sbjct: 1192 EKAIELDP 1199
>gi|159026094|emb|CAO86323.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 666
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 90/194 (46%), Gaps = 9/194 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +++L+ + N+ + K
Sbjct: 377 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGW 436
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G+ +LN++ +E + +
Sbjct: 437 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQF 491
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q K+ ++SEAL + + K ++ +L QG + L + E
Sbjct: 492 NPQFSQAHYSQGIILQ-KL--GRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQE 548
Query: 311 AEKQFEKFRRLVPR 324
A +EK RR+ R
Sbjct: 549 AIASYEKARRISSR 562
>gi|443646867|ref|ZP_21129545.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
gi|443335696|gb|ELS50160.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
DIANCHI905]
Length = 1254
Score = 40.0 bits (92), Expect = 1.8, Method: Composition-based stats.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE----FEWQLLKAQVQSY 195
Q + +P ++ L + + +L EA+ + IE +P+ + L+ Q++
Sbjct: 1006 QAIKVDPTYAKSYHNLGFLAAQQGQLEEAISYYQQAIESQPDYPSAFYNLGLVYEQLK-- 1063
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
E+E AI + ++ D VE Y L YD E + EK RC +
Sbjct: 1064 --ETEKAIACYSHSVQLDSTNVEVYKSLAQLYD-----RQENYAKAEKYY-RCALLLQPH 1115
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+L + + + + + K +A+ ++++++ +P+D YL GI Y + +A+ F
Sbjct: 1116 NL-ELRYNLGVVLYEQEKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCF 1174
Query: 316 EKFRRLVP 323
EK L P
Sbjct: 1175 EKAIELDP 1182
>gi|298248828|ref|ZP_06972633.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
gi|297551487|gb|EFH85353.1| serine/threonine protein kinase with TPR repeats [Ktedonobacter
racemifer DSM 44963]
Length = 635
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 15/196 (7%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE EQ + +P D+ + +V + EA+ V +R L+P + L+
Sbjct: 442 EEALAVYEQAIDLDPTDVSTYWSKGDVLDNLGRREEALAVYERATNLDPTDVHTHWLRGD 501
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ G E A+ FE+ + +P A G D + +L E EKA+
Sbjct: 502 MLRKLGRLEEALAAFEKAVNLEPTHFYALLGKGRVLD-NLGRLEEALVVFEKAI------ 554
Query: 252 KKKSDLRDFKLL--IAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+L +L + + +V++ + EAL VYE+++ +P D Y + L +
Sbjct: 555 ----NLEPIHILTRLEKGRVLDNLGRLEEALAVYEQIINLDPTDASAYTFKSSALLKLGR 610
Query: 308 KDEAEKQFEKFRRLVP 323
++EA +E+ + P
Sbjct: 611 REEALAVYEQIKEKSP 626
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
AAN + I +L +V ++ +L EA+ V ++ I+L+P + K V G E A
Sbjct: 419 AANLDPIGSLCGKGDVLLQLGRLEEALAVYEQAIDLDPTDVSTYWSKGDVLDNLGRREEA 478
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
+ +E DP V H L +L E EKA+ + F
Sbjct: 479 LAVYERATNLDPTDVHT-HWLRGDMLRKLGRLEEALAAFEKAV--------NLEPTHFYA 529
Query: 263 LIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
L+ + +V++ + EAL V+E+ + EP L +G + L + +EA +E+
Sbjct: 530 LLGKGRVLDNLGRLEEALVVFEKAINLEPIHILTRLEKGRVLDNLGRLEEALAVYEQIIN 589
Query: 321 LVPRN 325
L P +
Sbjct: 590 LDPTD 594
>gi|451979886|ref|ZP_21928294.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
gi|451762906|emb|CCQ89508.1| conserved hypothetical protein [Nitrospina gracilis 3/211]
Length = 504
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 9/164 (5%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
+AVD R E++P + ++ S G+ + A + FE + DP A++ L +
Sbjct: 128 QAVDAFRRAAEIDPTDPDYPFNLGNALSTLGDVKEARRQFERTVFLDPSYAHAWNNLGI- 186
Query: 227 YDGSDKKLNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALRVYEELV 285
L E + I++AM+ ++ + D + + + +AL Y++ V
Sbjct: 187 ------MLRECGE-IKEAMDAYQRALDINPQFADAHFNLGNLYEAQGNAEQALVSYQQAV 239
Query: 286 KEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYR 329
K PR + Y IY L + D A + +E + P NH R
Sbjct: 240 KANPRFAKAYNNLANIYYLQMEMDRARETYETVLEIDPANHTAR 283
>gi|383453634|ref|YP_005367623.1| serine/threonine protein kinase [Corallococcus coralloides DSM
2259]
gi|380733353|gb|AFE09355.1| serine/threonine protein kinase [Corallococcus coralloides DSM
2259]
Length = 657
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%)
Query: 267 IKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+ + + EAL + V PR+ +L QG + + + E+ + +E+F P NH
Sbjct: 578 MHLTRGRQKEALDAANQCVARLPREPDCHLLQGDVLAKMNQASESARSYERFLAFAPANH 637
Query: 327 PYREYFVDNMVATKIFG 343
P R V +V + G
Sbjct: 638 PRRPDVVQKLVELRATG 654
>gi|224073808|ref|XP_002304180.1| predicted protein [Populus trichocarpa]
gi|222841612|gb|EEE79159.1| predicted protein [Populus trichocarpa]
Length = 796
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 9/174 (5%)
Query: 126 REDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE-FE 184
R D Y E K L +P++IE L+ L ++ + + L V+ +L+ L+PN
Sbjct: 88 RSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLTGFVETRQKLLSLKPNHRMN 147
Query: 185 WQLLKA--QVQSYAGESEAAIKGFEEILRKD--PLRVEAYHGLVMAYDGSDKKLNEVEKR 240
W + S ++ ++ +E L D P HG ++ Y S L E
Sbjct: 148 WIGFAVAHHLNSDGSKAVEILEAYEGTLDDDYPPDNERWEHGEMLLYKIS---LLEECGS 204
Query: 241 IEKAMERC-KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFR 293
+E+A+E KKE K D +K + V +H E +Y+ L+ P ++R
Sbjct: 205 LERAIEELRKKESKIVDKLTYKEQEVSLLVKLGRHEEGAELYKALLSINPDNYR 258
>gi|218439885|ref|YP_002378214.1| hypothetical protein PCC7424_2942 [Cyanothece sp. PCC 7424]
gi|218172613|gb|ACK71346.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7424]
Length = 632
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 123 TSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE 182
+A+ + ++ E E+ Q + NPN+ +A + L KL EA+ + IE+ PN
Sbjct: 34 NAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIEINPNY 93
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
E Y G+ E AI + + +P E Y L A + KL E
Sbjct: 94 AEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALS-NQGKLEEAIAAYN 152
Query: 243 KAME 246
KA+E
Sbjct: 153 KAIE 156
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 12/209 (5%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NPN E L KL EA+ + IE+ PN E S G+ E AI
Sbjct: 90 NPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQGKLEEAIA 149
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
+ + + +P AY GL +A + KL E KA+E + F L
Sbjct: 150 AYNKAIEINPNYAFAYIGLGIALY-NQGKLEEAIAAYNKAIEINPNYAEVYSNLGFALY- 207
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+ K EA+ Y ++ P D Y GI + K +EA + + P
Sbjct: 208 -----NQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINP- 261
Query: 325 NHPYREYFVDNMVATKIFGEKVDRESMAS 353
+ F N + ++ + E++A+
Sbjct: 262 ----NDAFAYNNLGVALYNQGKLEEAIAA 286
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 4/149 (2%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE-FEWQLLKAQVQSYAGESEAAI 203
NPND A L KL EA+ + IE+ PN+ F + L + + G+ E AI
Sbjct: 226 NPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVALYN-QGKLEEAI 284
Query: 204 KGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK-L 262
+ + +P AY GL +A KL E K + K+ ++ +
Sbjct: 285 AAYNTAIEINPNDAFAYIGLGIALH-DQGKLEEAIAAYNKTLSLADKKADRASVHTLAHT 343
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRD 291
+ + K EA+ YE+ +K +P +
Sbjct: 344 TLGYALQQQGKLEEAIAEYEKALKIDPNN 372
>gi|427737030|ref|YP_007056574.1| hypothetical protein Riv7116_3576 [Rivularia sp. PCC 7116]
gi|427372071|gb|AFY56027.1| hypothetical protein Riv7116_3576 [Rivularia sp. PCC 7116]
Length = 956
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF-EWQLLK 189
YE+ ++ + P+D A V ++ +A+D D+ I+++P+++ W +
Sbjct: 125 YEDAVAAYDKAIEIKPDDYYAWLNRGYVLGNLERYEDAIDCYDKAIQIKPDDYYSWVNMG 184
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
A + ++E AI F++ + P +A+ +A D +K + V EKA+E
Sbjct: 185 AILCKKLQQNENAIAFFDKAIEIKPDDYDAWLYRGIALDNLEKYEDAV-TSFEKAIEI-- 241
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
K D D + + ++ +A+ Y + ++ +P ++ + +G L +
Sbjct: 242 ----KPDDYDAWFDYGNVLLSLERYEDAIAAYNKAIEIKPDNYSALINRGSALFHLERNQ 297
Query: 310 EAEKQFEKFRRLVPRNH 326
+A FEK + P N+
Sbjct: 298 DAVGSFEKAIEIKPDNY 314
>gi|196005799|ref|XP_002112766.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
gi|190584807|gb|EDV24876.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
Length = 802
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE + + I+SQ +A+ D+ ++PNE +WQL+ A G A+
Sbjct: 603 PSNIETISWIGSYYIESQFCEKAISYFDKASMIQPNEVKWQLMVASCYRIIGNYNRALDK 662
Query: 206 FEEILRKDPLRVEAYHGLV 224
+++I K P + LV
Sbjct: 663 YKQIHEKFPENTDCLKFLV 681
>gi|163858323|ref|YP_001632621.1| hypothetical protein Bpet4005 [Bordetella petrii DSM 12804]
gi|163262051|emb|CAP44353.1| conserved hypothetical protein [Bordetella petrii]
Length = 607
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 108 AAATVESTNESTKDTTSAREDVS--------YEEKEKEIEQHLAANPNDIEALQTL-MEV 158
A AT+E+ N++ DT + +++ Y+E E ++ Q +A +P+ A L +
Sbjct: 443 AVATLEAANQAQPDTVEIKYELAMLYERQGRYDELETQLRQVIALDPDHAHAYNALGYTL 502
Query: 159 RIKSQKLVEAVDVIDRLIELEPNE 182
++Q+L EA+D+I + +EL+P++
Sbjct: 503 ADRNQRLPEALDLITQALELQPDD 526
>gi|398342554|ref|ZP_10527257.1| hypothetical protein LinasL1_05659 [Leptospira inadai serovar Lyme
str. 10]
Length = 292
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 18/197 (9%)
Query: 125 AREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE 184
A E YE E +++L P+DI AL + + EA D +++EP+ F+
Sbjct: 87 AYERKDYETSILEYDRYLEKIPSDIYALYNRGLAKYNLGRFSEAKIDFDTALKIEPDNFD 146
Query: 185 WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK---KLNEVEK-- 239
L + +S + E A K + ++ EAY + Y+ S++ L + ++
Sbjct: 147 LLLYRGYCKSELEKREEAFKDVDRAIKLGAKYAEAYVNRAILYNLSEQPTAALKDAKEAV 206
Query: 240 RIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRD-FRPYLCQ 298
RI+ R +F++ A + K+++++ Y + + P+D + Y +
Sbjct: 207 RIDAGSSRA----------NFQIGYAYYSL--KKYNDSINAYSKAIALNPKDGGQSYYNR 254
Query: 299 GIIYTLLRKKDEAEKQF 315
G+ Y +RKK A + F
Sbjct: 255 GLGYLAVRKKTNACEDF 271
>gi|29839817|ref|NP_828923.1| type III secretion chaperone [Chlamydophila caviae GPIC]
gi|29834164|gb|AAP04801.1| type III secretion chaperone, putative [Chlamydophila caviae GPIC]
Length = 335
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 135 EKEIEQHLA---ANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E+ IEQ+ A +P+D E +L V + + +EA++ DR++EL+P + KA
Sbjct: 94 EEAIEQYRAYIILHPDDAECWFSLGGVYHRLGRYIEAIECFDRILELDPWNPQSMYNKAV 153
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
V + AI E + K+PL +A+ + + Y L K+ +KA E ++
Sbjct: 154 VLTDMDNELEAIALLETTVSKNPLYWKAW--IKLGY------LLSRHKQWDKATEAYERV 205
Query: 252 KK-KSDLRDFKLLIAQIKVMESKHSEALRVYEE--LVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + DL D + + K AL+ ++E + EE D Y+ G+ + L++
Sbjct: 206 VQLRPDLSDGHYNLGLCYLTLDKTRLALKAFQEALFLNEEDADAHFYV--GLAHMDLKQN 263
Query: 309 DEAEKQFEK 317
+A F +
Sbjct: 264 QQASDAFHR 272
>gi|433606636|ref|YP_007039005.1| hypothetical protein BN6_48600 [Saccharothrix espanaensis DSM
44229]
gi|407884489|emb|CCH32132.1| hypothetical protein BN6_48600 [Saccharothrix espanaensis DSM
44229]
Length = 397
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 123 TSAREDVSYEEKEKEIEQHLAANPNDIEALQTL-MEVRIKSQKLVEAVDVIDRLIELEPN 181
T+ + Y ++ + + Q L N + L +E+R ++ LV A++ +DR L+P
Sbjct: 143 TAMDDQTPYPDRVRLLRQALDLNEARADVNGALGIELRDVAEDLVPAINHLDRATRLQPE 202
Query: 182 EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
+W QS G+ EAA++ E +R DP A+ L
Sbjct: 203 APKWWRELGIAQSRKGQLEAAVRSLSEAVRLDPADAGAHSSL 244
>gi|428317970|ref|YP_007115852.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428241650|gb|AFZ07436.1| Tetratricopeptide TPR_2 repeat-containing protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 758
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 23/192 (11%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
LA NPN E + + + +A+D DR I + P+++E +A V +
Sbjct: 554 LAFNPNRYETWYNRGNMLWRLLRYSDAIDSYDRAICIRPDKYEVWYNRAAVLGKLQRYQE 613
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI---EKAME---RCKKEKKKS 255
+I+ +++ + P E +H A+D KL++ E I E A+ C
Sbjct: 614 SIESYDKAIAIKPQDFEVWHNRGAAFD----KLSQHEAAIASYESAITLNPEC------- 662
Query: 256 DLRDFKLLIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
++ A+ + + ++ EA+ YE+ + +P + + GI + L++ +EA
Sbjct: 663 ----YEAWFAKGESLAKLQRNEEAIAAYEKAIAIKPDSYDAWRHVGIALSALKRYEEAMA 718
Query: 314 QFEKFRRLVPRN 325
+++ + P N
Sbjct: 719 AYDRAIAIKPEN 730
>gi|418695429|ref|ZP_13256449.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H1]
gi|421107178|ref|ZP_15567735.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H2]
gi|409956883|gb|EKO15804.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H1]
gi|410007798|gb|EKO61482.1| tetratricopeptide repeat protein [Leptospira kirschneri str. H2]
Length = 284
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + +A T E+ E K A E +Y +E +L P D A V
Sbjct: 54 KSSYSNSAVSATTAENPQEIFKRAYRANEKGAYLNSIEEYSNYLKLVPEDASAYYNRGVV 113
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + A++ FE+ + +
Sbjct: 114 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKRAVENFEKAVSLGENKNA 173
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + DK E+ + A+ K +KK + F+L AQ + K+S+++
Sbjct: 174 ELYGHKARCENRDKNY---EEGFQDALNALKIDKKNA-YAFFELAYAQYGL--KKYSDSV 227
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 228 ESYTKVLQFNPNDGVAFHNRGLALVFLNKTSLACKDFQR 266
>gi|251800015|ref|YP_003014746.1| hypothetical protein Pjdr2_6057 [Paenibacillus sp. JDR-2]
gi|247547641|gb|ACT04660.1| Tetratricopeptide TPR_2 repeat protein [Paenibacillus sp. JDR-2]
Length = 847
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQ-VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVM 225
E ++ +D++IEL+PN E + K Q + ++A EA I+ E+L DP +AY L
Sbjct: 702 ECIEHLDKVIELDPNAIEARETKLQALFTHAQNFEACIQTGLELLELDPGNSDAYDFLAW 761
Query: 226 AYDGSDKKLNEVEKRIEKAM--ERCKKEKKKSDLRDFKLLIAQIKVMESKHS-EALRVYE 282
+Y DK K I KA E +K + KL I +ME S EAL V +
Sbjct: 762 SYYMQDK------KEIAKAYLQEGLQKHSDHVSMLHIKL----IMLMEGDQSREALAVCD 811
Query: 283 ELVKEEPR 290
++ +P+
Sbjct: 812 RILDLDPQ 819
>gi|374597535|ref|ZP_09670537.1| Tetratricopeptide TPR_2 repeat-containing protein [Myroides
odoratus DSM 2801]
gi|374601280|ref|ZP_09674282.1| Tetratricopeptide TPR_2 repeat-containing protein [Myroides
odoratus DSM 2801]
gi|423324141|ref|ZP_17301983.1| hypothetical protein HMPREF9716_01340 [Myroides odoratimimus CIP
103059]
gi|373909005|gb|EHQ40854.1| Tetratricopeptide TPR_2 repeat-containing protein [Myroides
odoratus DSM 2801]
gi|373912750|gb|EHQ44599.1| Tetratricopeptide TPR_2 repeat-containing protein [Myroides
odoratus DSM 2801]
gi|404608721|gb|EKB08173.1| hypothetical protein HMPREF9716_01340 [Myroides odoratimimus CIP
103059]
Length = 419
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y++ EK I + ANP+D + T M++ +KS + + ++ + PN+ + L
Sbjct: 245 YDQAEKAIVEARKANPDDTNLMLTQMDLYLKSNNMGKYEEIAKEALSKNPND-DLLLYNL 303
Query: 191 QVQSY-AGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
V SY AG+ E A K +E+ +R +P AY L MA+
Sbjct: 304 GVTSYQAGKIEDARKYYEQAIRINPKNENAY--LNMAF 339
>gi|145495406|ref|XP_001433696.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400815|emb|CAK66299.1| unnamed protein product [Paramecium tetraurelia]
Length = 456
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ 186
E SYE + + + P++I A V + + +EA++ ++ IE++P
Sbjct: 237 EKSSYETSYQHLSLAIQDQPDNILAYNNRGFVLFEMNQPLEALENYNKAIEIKPTIATLY 296
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAM- 245
+ + + + E AI+ + + + DP +AY Y +K +E +K IE A+
Sbjct: 297 YNRGNIAYFLNQFEKAIEDYSQTILIDPNYAKAYCNRGTIYKQLEK-FDEAKKDIEIAVK 355
Query: 246 ---ERCKKEKKKSDLRDFKL----LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQ 298
+ K DL F L +I I+ +A+ + ++ P+ + Y +
Sbjct: 356 IDPQITTKRNFSFDLSLFALPKNPIIQNIE-------KAVEAFTGAIELSPQMTQAYQQR 408
Query: 299 GIIYTLLRKKDEAEKQFEKFRRLVPRN 325
GI Y +L++ +E+ K F + L P N
Sbjct: 409 GIAYFILKQYEESLKDFSQVLLLEPNN 435
>gi|338814927|ref|ZP_08626892.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
gi|337273094|gb|EGO61766.1| peptidase C14 caspase catalytic subunit p20 [Acetonema longum DSM
6540]
Length = 525
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 7/196 (3%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+YE+ ++ + L NP + +L V ++ +A+ +R IEL+P + +
Sbjct: 150 NYEQAVRDYTKTLELNPRHVPSLFERGNVFFALEQWDQALRDYNRAIELDPRSVQVYNSR 209
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCK 249
V + G+ EAA+ + + L DP V AY+ Y K+ E KA+E
Sbjct: 210 GLVYAETGKPEAALADYNKALEIDPDYVHAYNNRGDLYQ-LQKRYGEAIADFNKALELNP 268
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
D R + + + +A+ Y + + + R Y +G Y+ +D
Sbjct: 269 SSAAAYDRR------GRCYYAQGNYDQAIADYSKALDIDSRYIHAYNNRGNAYSNRGLRD 322
Query: 310 EAEKQFEKFRRLVPRN 325
+A + + PRN
Sbjct: 323 QAIADYSLAIEINPRN 338
>gi|33863561|ref|NP_895121.1| hypothetical protein PMT1293 [Prochlorococcus marinus str. MIT
9313]
gi|33641010|emb|CAE21468.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9313]
Length = 279
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 84/206 (40%), Gaps = 33/206 (16%)
Query: 102 IAAPVAAAATVESTNESTKDTTSARE--DVSYEEKEKEIEQHLAANPNDIEALQTLMEVR 159
IA A E N KD + D++ EE++K +E+ L N+
Sbjct: 34 IAPESRALGNREILNRQVKDLLDQQNNGDLNTEEQQKLLERLLVLGRNE----------- 82
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
EA+ I+ L+ +P + W+L+ A+++ G+ + A K +++ P +E
Sbjct: 83 -------EAMTQIELLMARQPKTWLWKLMLAELKREQGDRDGAQKDINQLITIQPHNLEV 135
Query: 220 YHGLVMAYD---GSDK-KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHS 275
L + D G +K + E++KR K K LL+A ++ +
Sbjct: 136 LQ-LKILLDLEAGREKAAVAELKKRF--------GSKTKGKRIPIGLLLADLQRQTGQTK 186
Query: 276 EALRVYEELVKEEPRDFRPYLCQGII 301
A +Y L E P D RP L ++
Sbjct: 187 AAAALYRVLSNESPTDARPLLALALM 212
>gi|425434175|ref|ZP_18814646.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
gi|389677169|emb|CCH93904.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9432]
Length = 736
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 9/194 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E+ L+ NP +A Q ++ ++ Q+ A +++L+ + N+ + K
Sbjct: 447 QEALESFERVLSLNPAASQAWQGKADIYLELQQYSAAQKALEKLLTFQQNDAKIWYKKGW 506
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD-KKLNEVEKRIEKAMERCKK 250
+ E A+K +++ L +E+ + L+ G+ +LN++ +E + +
Sbjct: 507 SLQNLEDYEGAVKAYDQ-----ALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQF 561
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
+ S + +I Q ++SEAL + + K ++ +L QG + L + E
Sbjct: 562 NPQFSQAYYSQGIILQ---KLGRNSEALEAFTQATKANSNYYQAWLNQGALLHQLERFQE 618
Query: 311 AEKQFEKFRRLVPR 324
A +EK RR+ R
Sbjct: 619 AIASYEKARRISSR 632
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 35/225 (15%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ--LLKAQVQSYAG 197
Q L NP+ +EALQ + + ++ EA++ ++ I++ P+ WQ L + +
Sbjct: 386 QALKINPDYLEALQGKADALLALKRYSEALNTYEKAIQINPDS-AWQAWLGRGEALDKLD 444
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME--------RCK 249
+++ A++ FE +L +P +A+ G Y ++ + +K +EK + K
Sbjct: 445 KNQEALESFERVLSLNPAASQAWQGKADIYL-ELQQYSAAQKALEKLLTFQQNDAKIWYK 503
Query: 250 KEKKKSDLRDFKLLIA---QIKVMES-----------------KHSEALRVYEELVKEEP 289
K +L D++ + Q +ES K + AL Y + + P
Sbjct: 504 KGWSLQNLEDYEGAVKAYDQALAIESDNALIWYQKGNSLYQLNKINNALESYSKAGQFNP 563
Query: 290 RDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+ + Y QGII L + EA E F + N Y + +++
Sbjct: 564 QFSQAYYSQGIILQKLGRNSEA---LEAFTQATKANSNYYQAWLN 605
>gi|423215840|ref|ZP_17202366.1| hypothetical protein HMPREF1074_03898 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691320|gb|EIY84566.1| hypothetical protein HMPREF1074_03898 [Bacteroides xylanisolvens
CL03T12C04]
Length = 139
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
+K+++ A+D I + IE+ P + +Q A V G E AI+ IL+ DP EA
Sbjct: 39 LKARQFQRALDDIVKAIEMNPTDLTYQAEHAVVNLRVGRYEEAIQILNNILKADPKYAEA 98
Query: 220 YHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
Y L + + +++K E C KK +L D
Sbjct: 99 YRLLGLC-----------QIQLKKTDEACGNFKKAKELGD 127
>gi|367011743|ref|XP_003680372.1| hypothetical protein TDEL_0C02720 [Torulaspora delbrueckii]
gi|359748031|emb|CCE91161.1| hypothetical protein TDEL_0C02720 [Torulaspora delbrueckii]
Length = 700
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 7/160 (4%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A + R + +P + G+ + A+ FE+ +P+ V L+
Sbjct: 535 AKNCYRRALACDPQHYNAYYGLGMCYMKLGQYDKALLFFEKARNINPVNVI----LICCC 590
Query: 228 DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
+ +KL+ EK ++ + C+ + S L FK A + +++S AL +EEL K
Sbjct: 591 GVALEKLSYQEKALQYYEQACELQPS-SSLAKFK--KAHLLYSMARYSAALENFEELAKL 647
Query: 288 EPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHP 327
P + + G +Y ++ +K +A K+F L P+ +P
Sbjct: 648 APDEATVHFLLGQLYQIMGRKKDAVKEFTVAMNLDPKGNP 687
>gi|183221520|ref|YP_001839516.1| hypothetical protein LEPBI_I2138 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911604|ref|YP_001963159.1| hypothetical protein LBF_2084 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167776280|gb|ABZ94581.1| Conserved hypothetical protein containing tetratricopeptide repeat
(TPR) domains [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779942|gb|ABZ98240.1| Putative TPR-repeat-containing protein [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 700
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+++ L P+D+++L L E+ K +LVEA + R+I L P + + +
Sbjct: 377 LKKALLLKPSDVDSLFALAELYYKKGELVEAESLFRRIIRLTPGDTYSETAYVNLGIILD 436
Query: 198 ESE---AAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK-RIEKAMERCKKEKK 253
E E +I FE L +P AY+ L ++Y + K +E R +A++
Sbjct: 437 EMERYSESIAAFEGALSLNPKNQSAYYNLGLSYLHAGKPTMAIESLRKSQALDPNHVPS- 495
Query: 254 KSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
+L IA + ++EA+ YEE + +P + L +Y + AEK
Sbjct: 496 -------RLAIADYYLENRFYNEAISEYEEAIAWKPELYEARLKLADVYIQTKNYQAAEK 548
>gi|222056573|ref|YP_002538935.1| hypothetical protein Geob_3491 [Geobacter daltonii FRC-32]
gi|221565862|gb|ACM21834.1| Tetratricopeptide TPR_2 repeat protein [Geobacter daltonii FRC-32]
Length = 264
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
I+ L P DIEA +L ++ +S + EA+ ++IEL P E + + V +
Sbjct: 62 IKAGLKRAPEDIEAWTSLGDILFESGQHKEAIAAYKKVIELRPAEADGYVSLGLVYNSLE 121
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
++ A++ F + L DP V A + L Y G L ++ IE + + +
Sbjct: 122 RADDALQAFNKALELDPHNVFALNALGDLYYG----LGNNDQAIEAYRKGIALDPNDAAA 177
Query: 258 RDFKL--LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
R F L L + +ES E L E V+ +P YL G I + EA K F
Sbjct: 178 R-FNLGDLFYDLGDLESAEKETL----EAVRLDPNFTMSYLTLGNICIDQERLAEATKYF 232
Query: 316 EKFRR 320
E + +
Sbjct: 233 ELYLK 237
>gi|119357637|ref|YP_912281.1| hypothetical protein Cpha266_1841 [Chlorobium phaeobacteroides DSM
266]
gi|119354986|gb|ABL65857.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3035
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
Query: 94 PFHSIKPAIAAPVAAAATVESTNEST---KDTTSAREDVSYEEKEKEIEQHLAANPNDIE 150
P S++ ++A P AA STNE + + + ++ +E E + L+++P +
Sbjct: 788 PLSSMERSVARPSHAAG--RSTNEESVKLQRALTLHQEGRLDEAEALYREILSSSPEHFD 845
Query: 151 ALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEIL 210
ALQ + + +A+ + D+ I + P + + E A+ +E+ L
Sbjct: 846 ALQLSATIAAQRHDSEQALVLFDQAISINPGHPGSRNNRGNALRALQRYEEALDSYEKAL 905
Query: 211 RKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKK-KSDLRDFKLLIAQIKV 269
+ P V+AY L E+ KR E+A+ ++ K D +F +A + +
Sbjct: 906 QLKPDYVDAY-------TNRGSVLLEL-KRYEEALASYERAIAIKPDHTEFYSDLAVVLL 957
Query: 270 MESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYR 329
++ EAL YE +++ D Y +G + L++ +EA +EK + N Y
Sbjct: 958 ALKRYEEALATYERVLELRRDDPVVYNNRGNVLLELKRYEEALGSYEK---AIALNPDYA 1014
Query: 330 EYFVDNMVATKIFGEKVDRESMAS 353
E + + V K+ K D E++ S
Sbjct: 1015 EAYSNLGVTRKVL--KRDEEALGS 1036
>gi|260913128|ref|ZP_05919610.1| cytochrome c-type biogenesis protein CcmH [Pasteurella dagmatis
ATCC 43325]
gi|260632715|gb|EEX50884.1| cytochrome c-type biogenesis protein CcmH [Pasteurella dagmatis
ATCC 43325]
Length = 297
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL +PND + L ++ + + K A+D R +LEP+ E++L A++ ++ +
Sbjct: 159 HLQKSPNDAKGWWLLGQIAMNTNKAQLALDSYARANKLEPDNLEYKLSYARILMFSEDPT 218
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY 227
KG +E++RKD +EA L Y
Sbjct: 219 DKSKGDELLKEVIRKDHANLEALGLLAFRY 248
>gi|307152401|ref|YP_003887785.1| hypothetical protein Cyan7822_2538 [Cyanothece sp. PCC 7822]
gi|306982629|gb|ADN14510.1| hypothetical protein Cyan7822_2538 [Cyanothece sp. PCC 7822]
Length = 271
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 116 NESTKDTTSAREDVSYEEKE--KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVID 173
N+S+ TTS + + K+ + E+ L PN++ ALQ L E R+ Q A++ +
Sbjct: 37 NKSSTQTTSKVSGQAQQLKQIAQGYEEVLKREPNNVSALQGLAEARLGLQDFPGAIEPVK 96
Query: 174 RLIELEPNEFEW----QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDG 229
+L ++P ++ L ++ +G +E K E++ + DP + L Y
Sbjct: 97 KLHTIDPANLQYIGVLTQLYQKINDISGAAELQPK-VEKLAQSDPKNPQYLIILTQLY-- 153
Query: 230 SDKKLNEV--EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
++ N V K +EK +E+ + ++ + ++AQ+ + + AL V ++L K
Sbjct: 154 --RQTNNVSGSKNLEKQVEKLAQSDPENP--QYLQILAQLHLQTNDLPGALEVMKKLQKF 209
Query: 288 EPRD 291
P D
Sbjct: 210 YPDD 213
>gi|407975832|ref|ZP_11156735.1| hypothetical protein NA8A_16021 [Nitratireductor indicus C115]
gi|407428693|gb|EKF41374.1| hypothetical protein NA8A_16021 [Nitratireductor indicus C115]
Length = 705
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 242 EKAMERCKKEKKKSDLRDFKLLIAQIKVME-SKHSEALRVYEELVKEEPRDFRPYLCQGI 300
EKA+E K+ K S R L + + + +H+EA +E +K+EP D R YL G
Sbjct: 336 EKAIELYKRIKPGSPWRRLAELQTGLNLADLDRHTEAASFLDEAIKKEPDDMRAYLALGR 395
Query: 301 IYTLLRKKDEAEKQFEK 317
+Y + + A K +++
Sbjct: 396 VYAVQKDFASAAKVYDR 412
>gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE]
gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 348
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 70/158 (44%), Gaps = 7/158 (4%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
E++ + +++E +PN E +++ G+ + AIK E ++ P EA+ L +A
Sbjct: 9 ESIGKLQKMVEADPNNQEARMMLGLAYGTRGQYQEAIKELEAAVKMKPENPEAHFDLGLA 68
Query: 227 YDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVK 286
Y+ D N V+ E + + K D D L +A + +AL ++++++
Sbjct: 69 YNMMDDLDNAVK-------EYNETLRLKPDHLDAMLNLANAYLAMGNADDALGLFKDMIA 121
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+ P + G+ D+AE+ +K PR
Sbjct: 122 KNPESAEVFASFGVALASAGYLDDAEEMLKKAIAKDPR 159
>gi|406981607|gb|EKE03050.1| hypothetical protein ACD_20C00280G0003 [uncultured bacterium]
Length = 265
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 228 DGSDKKLNEVEKRIEKAMERCKKEKKKS----DLRDFKLLIAQIKVMESKHSEALRVYEE 283
D S + E +++ KA E K K+ S L D +L A+ ++ + EA+ +YE
Sbjct: 153 DTSADTIVEQTRQLSKAYEEIDKLKRNSISTDRLTDSIILQAEKLHLQGQTQEAIAIYEI 212
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
L K E R + Y +IY L EAEKQ++KF L P
Sbjct: 213 LDKLEVRKPKIYQNLAVIYQGLGMNSEAEKQYDKFYLLFP 252
>gi|15601878|ref|NP_244950.1| protein CcmH [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720212|gb|AAK02097.1| CcmH [Pasteurella multocida subsp. multocida str. Pm70]
Length = 304
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL P+D ++ L ++ + + K A+D R +LEP+ E++L A++ ++ ++
Sbjct: 163 HLQKQPSDAKSWWLLGQIAMNTNKGQLALDSYARAHQLEPDNIEYKLSYARILMFSEDTS 222
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY 227
KG +E++RKD +EA L Y
Sbjct: 223 DKTKGDTLLKEVIRKDHSNLEALGLLAFRY 252
>gi|406871192|gb|EKD22093.1| hypothetical protein ACD_87C00164G0002, partial [uncultured
bacterium]
Length = 536
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 7/188 (3%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L +PNDI+ + + + + AV R+I+L+P Q+
Sbjct: 106 LETHPNDIDIRLLRGGIYLNQKNYLSAVAEYRRVIDLDPKNLTALFYLGTSQAELKRFGE 165
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
A+ F+E++R DP A + L + L ++++ E K +
Sbjct: 166 AVASFQELIRIDPDHFMANYYLA-------RLLTDLQRYKEAEAGFRKTLTLRPQFEPVL 218
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
+ +A + + + +EA++VY++ P + + G ++ ++ DEAE F + +L
Sbjct: 219 IDLASLYERQKRITEAIQVYKDFTTAFPAKLQARIKLGELFLREKRYDEAEDTFREILKL 278
Query: 322 VPRNHPYR 329
P N R
Sbjct: 279 DPANREVR 286
>gi|289191717|ref|YP_003457658.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938167|gb|ADC68922.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 308
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E K ++ N DI AL ++++ I +L +A++ + ++L P++ L K
Sbjct: 191 YGEALKCFKKVFERNDKDIRALMYIIQILIYLGRLSQALEYTKKALKLNPDDPLLYLYKG 250
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
+ + G+ + AIK F+++L +P EA++G +A + KL ++ + IE
Sbjct: 251 IILNKLGKYKDAIKYFDKVLEINPNFPEAWNGKAVALE----KLGKINEAIE 298
>gi|440682547|ref|YP_007157342.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428679666|gb|AFZ58432.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 1409
Score = 39.7 bits (91), Expect = 2.4, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLV 224
+AV D+ +E +P+ E L++ Y GE E A+ +++ L P EA+ G+
Sbjct: 196 QAVAFFDKALEFKPDYHEVWLIRGGALDYLGEYEQAVASYDKALEIKPDYHEAWCKRGVA 255
Query: 225 MAYDGSDKKLNEVEKRI---EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
+A L E E+ + +KA+E K D + + V ++ +A+ +
Sbjct: 256 LA------NLGEYEQAVASYDKALE------IKPDYHEVGNNRGLLLVHLGEYQKAVASF 303
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
++ ++ +P D+ + +G+ L + ++A + K + P H
Sbjct: 304 DKALEIKPNDYDAWHYRGVALGYLGEYEQAVASYNKALEIKPEYH 348
>gi|422303467|ref|ZP_16390818.1| Similar to tr|Q7NMJ3|Q7NMJ3 [Microcystis aeruginosa PCC 9806]
gi|389791546|emb|CCI12637.1| Similar to tr|Q7NMJ3|Q7NMJ3 [Microcystis aeruginosa PCC 9806]
Length = 250
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 148 DIEALQTLMEVRIKSQK---LVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
DI+A ++ ++ ++ +++++ + + ++L PN + +++ Q A + AA
Sbjct: 49 DIKAANRYRQLGLQYRQQGDFIKSIEALKKSLQLNPNHLDGRVILGWTQHLAKQPLAAQT 108
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAM---ERCKKEKKKSDLRDFK 261
EE ++ P V AY+ L + Y V +EKA+ + K +++ +
Sbjct: 109 TLEETIKIAPDHVAAYNALGIVY--------LVGGHLEKAVVTHTKAANLKPDNEIAYYN 160
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRL 321
L +A ++ + + A+ E+ VK EP + P + +IY +A ++K R L
Sbjct: 161 LSLAYHRLKD--FNSAITNAEKAVKLEPNNPHPLVALAMIYLDQGDSKKARDTYKKARDL 218
Query: 322 VPRNHPYRE-YFVDNM 336
R YR+ +F+ ++
Sbjct: 219 DGR---YRQKWFLAHL 231
>gi|329964573|ref|ZP_08301627.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328524973|gb|EGF52025.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 597
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 104/229 (45%), Gaps = 33/229 (14%)
Query: 140 QH-LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
QH L+ +PN AL + + + +K+ + +++ +E +P+ F + A + E
Sbjct: 76 QHCLSIHPNASSALYEMAQYYMFLKKIPQGQAALEKAVENDPDNFWYSQGLANLYMQQNE 135
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVM------AYDGSDKKLNEVEKRIEKA----MER- 247
E A E ++ + +++ + L+ AYD LN++E+R+ K+ ME+
Sbjct: 136 KEKATALLEGMVTRFSSKLDPLYNLLEIYNRQEAYDKVIGILNKLEERMGKSEQLSMEKF 195
Query: 248 ---CKKEKKKSDLRD-------------FKLLIAQIKVMESKHSEALRVYEELVKEEPRD 291
+K+ KS R+ +++++ + + K EA R+Y++++KEEP +
Sbjct: 196 RIYLQKKDDKSAFREIESLVAEYPMDTRYQIVLGDVYMQNGKKEEAYRLYQKVLKEEPEN 255
Query: 292 FRPYLCQGIIYTLLRKKDEAEKQFEKF---RRLVPRN--HPYREYFVDN 335
Y +K+ E+Q + +++ P + R++ V N
Sbjct: 256 ALAMYSMASYYEATGQKELYERQLDTLLLNKKVAPDTKLNVMRQFIVQN 304
>gi|124008335|ref|ZP_01693030.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
23134]
gi|123986124|gb|EAY25960.1| tetratricopeptide repeat domain protein [Microscilla marina ATCC
23134]
Length = 417
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 19/192 (9%)
Query: 126 REDVSYEEKEKEIEQHLAANPN--DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEF 183
RE YEE K +E+ + PN ++ ALQ +E+ +K+ KL +A+ ++ I+ P +
Sbjct: 226 RETKQYEEGVKVVEEGVKLAPNHENLRALQ--VELYVKTNKLDDAIKNLESAIDKNPKDV 283
Query: 184 EWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL-VMAYDGSDKKLNEVEKRIE 242
+ + AG+++ A +E L+ D +A L V+ ++ + K L E++K
Sbjct: 284 GNYVNLGIIYDKAGKTDKAEATYERCLKVDSENYKANFNLAVLQFNKAAKILTEIDKLTL 343
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
+ K+ ++ + FK + + +++K S+ + V RP G IY
Sbjct: 344 PEYNKRGKKMEQEAVVAFKKALPYFEKLKTKKSDDMSV-----------LRPL---GKIY 389
Query: 303 TLLRKKDEAEKQ 314
L +K + +K+
Sbjct: 390 NFLSRKSKTDKK 401
>gi|383756263|ref|YP_005435248.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
gi|381376932|dbj|BAL93749.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
Length = 921
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 155 LMEVRIKS--QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA-GESEAAIKGFEEILR 211
L++ R+ + Q + A+ ++DR+ +P + + LLK Q++ Y + +AA+ + +
Sbjct: 166 LLKARMLASRQDVDGALALVDRMTAADPKQADAWLLKGQLEQYGRHDRDAALAAYRRAVE 225
Query: 212 KDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVME 271
D ++ A+ LV + +L+ E ++ + K D+ KLL AQI +
Sbjct: 226 ADARKMTAHQALVGLLV-AGGQLDAAEAHVQ------QLAKTLPDVAGTKLLQAQIAYLR 278
Query: 272 SKHSEALRVYEELVKEEPRDFRPYLCQ--GIIYTLLRKKDEAEKQFEKFRRLVP 323
+ ++ + LV+ P + P + Q G LR +AE K +L P
Sbjct: 279 GDYEGVRKLTQPLVQATPNN--PVVLQLAGAAEYQLRALPQAETLLAKAVQLQP 330
>gi|126179259|ref|YP_001047224.1| TPR repeat-containing protein [Methanoculleus marisnigri JR1]
gi|125862053|gb|ABN57242.1| Tetratricopeptide TPR_2 repeat protein [Methanoculleus marisnigri
JR1]
Length = 1069
Score = 39.7 bits (91), Expect = 2.4, Method: Composition-based stats.
Identities = 44/223 (19%), Positives = 88/223 (39%), Gaps = 29/223 (13%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE + + + A+P A Q E+ + + +AV+ +++I+ +P +
Sbjct: 811 YEEALECSDSIVEASPESWAAWQRRGEIFMWLGRYADAVECFEKVIKADPADVLTLRRLG 870
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEK------- 243
+ AG E A+ + ++L ++P +E H A + NE K I+K
Sbjct: 871 EAHEKAGRYEDALAAYTQVLDREPTSIETLHARSSALIHLGR-YNEAVKSIDKIIVLQDE 929
Query: 244 ----------AMERCKKEKKKSDLRDFKLLI-----------AQIKVMESKHSEALRVYE 282
+E+ + + L I ++K +H +A++ ++
Sbjct: 930 NPAALFMRGTVLEKAGRHDDALASYEKALSIDPKNAAVWNAAGRLKDALGRHEDAVKAFD 989
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ + + D +L +G+ L K D A FEK PR+
Sbjct: 990 KAIDLDGGDIHAWLAKGLALGHLGKPDRATTCFEKVLEGDPRH 1032
Score = 38.5 bits (88), Expect = 4.7, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 14/184 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE ++ L+A P D AL + + EA++ IDRL + P + L KA
Sbjct: 540 YEEALACYDRALSAVPADRAALLGRSTALERLGRYEEALESIDRLTQAGPGDTGTLLRKA 599
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYH-GLVMAYDGSDKKLNEVEKRIEKAMERCK 249
+ G +AA++ +E +L DP + G V+A G R E+A R
Sbjct: 600 WILEALGRYDAAVECYEALLAADPKTGYPVNLGFVLAMLG----------RYEEAAGRF- 648
Query: 250 KEKKKSDLRDFKLLIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+E ++D +F + + +E ++++A Y ++ + P D + + L +
Sbjct: 649 EEATRADPDNFFAWFNRGRALERMGQYADAAGCYAKVAEGRPEDTGACFALAVTFARLGR 708
Query: 308 KDEA 311
+A
Sbjct: 709 HQKA 712
Score = 37.7 bits (86), Expect = 8.0, Method: Composition-based stats.
Identities = 51/252 (20%), Positives = 100/252 (39%), Gaps = 35/252 (13%)
Query: 101 AIAAPVAAAATVESTNESTKDTTSAR--------EDVSYEEKEKEIEQHLAANPNDIEAL 152
A+ AA E +++ D AR D + + K+ L + D EA
Sbjct: 739 AVGKHEEAAEAYEQYLKNSPDDRDARMAFGMALERDGKFGDAIKQYALVLEGDERDTEAW 798
Query: 153 QTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRK 212
TL + + EA++ D ++E P + + ++ + G A++ FE++++
Sbjct: 799 YTLESALVHMGRYEEALECSDSIVEASPESWAAWQRRGEIFMWLGRYADAVECFEKVIKA 858
Query: 213 DPLRVEAYHGLVMAYDGS--------------DKKLNEVEK---------RIEKAMERCK 249
DP V L A++ + D++ +E + + E K
Sbjct: 859 DPADVLTLRRLGEAHEKAGRYEDALAAYTQVLDREPTSIETLHARSSALIHLGRYNEAVK 918
Query: 250 KEKKKSDLRDFK--LLIAQIKVMES--KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLL 305
K L+D L + V+E +H +AL YE+ + +P++ + G + L
Sbjct: 919 SIDKIIVLQDENPAALFMRGTVLEKAGRHDDALASYEKALSIDPKNAAVWNAAGRLKDAL 978
Query: 306 RKKDEAEKQFEK 317
+ ++A K F+K
Sbjct: 979 GRHEDAVKAFDK 990
>gi|427739904|ref|YP_007059448.1| hypothetical protein Riv7116_6574 [Rivularia sp. PCC 7116]
gi|427374945|gb|AFY58901.1| tetratricopeptide repeat protein [Rivularia sp. PCC 7116]
Length = 586
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 89 LFMRLPFHSIKPAI--AAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANP 146
F LPF + P + P A + ++ + T+A + Y++ E ++L P
Sbjct: 4 FFKSLPFLLVLPVALHSQPAIAQCNEINVDKWFDEGTNAHRQLEYQKAETIWRKYLQCKP 63
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE-FEWQLLKAQVQSYAGESEAAIKG 205
N EA L +L EA+ + IEL+PN + + L V S + E AI
Sbjct: 64 NTAEARYRLGRALRDQDRLDEAIVEFKKAIELDPNHSYAYNGL-GMVYSEQNKLEKAINA 122
Query: 206 FEEILRKDPLRVEAYHGLVMAY 227
+E+ + +P ++A L Y
Sbjct: 123 YEKAVELNPKNIQASGNLGNVY 144
>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
Length = 470
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 13/175 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLLK 189
+EE + +E+ LA P++ E L L + K +K EAV+ +E P+ E W L
Sbjct: 122 FEEAVESLEKALAIEPHNEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEAWYELG 181
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMER 247
+S GE + A+ +E L DP ++ G+V +L E EK I A E
Sbjct: 182 YCYES-MGELKDALAAYEMYLNGDPENYAGWYNKGIVHL------RLEEFEKAI-NAFEL 233
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
K F A K K+ +A+ Y++ +K +P D Y G Y
Sbjct: 234 SIALKDDFSSSWFNCGYAYYKT--GKYKQAMTAYKKALKIDPDDETIYYNLGQTY 286
>gi|422302483|ref|ZP_16389846.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
gi|389788307|emb|CCI16150.1| Serine/threonine protein kinase [Microcystis aeruginosa PCC 9806]
Length = 707
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEW--QLL 188
Y + Q L NP+ +EALQ + + Q+ EA++ ++ I++ P+ W L
Sbjct: 348 YTDALNSYGQALKINPDYLEALQGKADALLALQRYSEALNTYEKAIQINPDS-AWAAWLG 406
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERC 248
+ + G+++ A+ F+ +L +P +A+ G Y ++ + +K ++K +
Sbjct: 407 RGEALDKLGKNQEALASFDRVLSFNPAASQAWQGKADIYL-ELQQYSAAQKALDKLLTFQ 465
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ + K + + L + +E + A++ YE+ + EP + + +G + L K
Sbjct: 466 QNDAKIWYKKGWSL-----QNLED-YEGAVKAYEQALAIEPDNALIWYQKGNSFYQLNKI 519
Query: 309 DEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVDRESMA 352
++A + + K + P+ F + I +K+ R+S A
Sbjct: 520 NDALESYSKAGQFNPQ-------FSQAHYSQGIILQKLGRKSEA 556
>gi|45657105|ref|YP_001191.1| hypothetical protein LIC11222 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421084205|ref|ZP_15545069.1| tetratricopeptide repeat protein [Leptospira santarosai str.
HAI1594]
gi|421105006|ref|ZP_15565599.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600342|gb|AAS69828.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410365316|gb|EKP20711.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410433377|gb|EKP77724.1| tetratricopeptide repeat protein [Leptospira santarosai str.
HAI1594]
Length = 312
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + A+ T E+ E K A E +Y +E ++L PND A V
Sbjct: 54 KASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLVPNDASAYYNRGLV 113
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + AI+ FE+ + +
Sbjct: 114 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIEDFEKAISLGENKNA 173
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + K +E + KA+ KK+ F+L AQ + K+S+++
Sbjct: 174 ELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYAQYGL--KKYSDSV 227
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 228 ESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 266
>gi|282164262|ref|YP_003356647.1| hypothetical protein MCP_1592 [Methanocella paludicola SANAE]
gi|282156576|dbj|BAI61664.1| hypothetical protein [Methanocella paludicola SANAE]
Length = 383
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
D +LL+A I E H+EA++ Y+E++K + +++ + G+ Y L+K D+A +K
Sbjct: 26 DLRLLLASIYRGEEMHNEAVKEYKEILKLDNQNYDAWYNLGMEYFALKKDDKAVDALKKA 85
Query: 319 RRLVP-RNHPYREYFVDNMVATK 340
P R P +F+ MV+ K
Sbjct: 86 AESSPDRQEP---WFLIGMVSYK 105
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 176 IELEPNEFEWQLLKAQVQSYAGES--EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
I +P + +LL A + Y GE A+K ++EIL+ D +A++ L M Y
Sbjct: 18 ITADPTNIDLRLLLASI--YRGEEMHNEAVKEYKEILKLDNQNYDAWYNLGMEYFAL--- 72
Query: 234 LNEVEKRIEKAMERCKKEKKKS-DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF 292
K+ +KA++ KK + S D ++ LI + + + EA+ ++ ++ P +
Sbjct: 73 -----KKDDKAVDALKKAAESSPDRQEPWFLIGMVSYKKKRIKEAIDAFKNTIERAPDNA 127
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
+ G Y K EA ++F++ VP +
Sbjct: 128 FAHYGLGSAYVETGKYAEANEEFKRNLHFVPHD 160
>gi|383310894|ref|YP_005363704.1| cytochrome c-type biogenesis protein CcmI [Pasteurella multocida
subsp. multocida str. HN06]
gi|386834940|ref|YP_006240257.1| protein CcmH [Pasteurella multocida subsp. multocida str. 3480]
gi|380872166|gb|AFF24533.1| cytochrome c-type biogenesis protein CcmI [Pasteurella multocida
subsp. multocida str. HN06]
gi|385201643|gb|AFI46498.1| CcmH [Pasteurella multocida subsp. multocida str. 3480]
Length = 304
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL P+D ++ L ++ + + K A+D R +LEP+ E++L A++ ++ ++
Sbjct: 163 HLQKQPSDAKSWWLLGQIAMNTNKGQLALDSYARAHQLEPDNIEYKLSYARILMFSEDTS 222
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY 227
KG +E++RKD +EA L Y
Sbjct: 223 DKTKGDTLLKEVIRKDHSNLEALGLLAFRY 252
>gi|189183309|ref|YP_001937094.1| TPR repeat-containing protein 01_03 [Orientia tsutsugamushi str.
Ikeda]
gi|189180080|dbj|BAG39860.1| TPR repeat-containing protein 01_03 [Orientia tsutsugamushi str.
Ikeda]
Length = 379
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 9/195 (4%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ + + + PN+ EA + + EA++ D I PN E K
Sbjct: 158 YEDAMENYDIAIKYEPNNPEAYYNKGIALMNLGYIQEAIENYDIAIRYRPNYSEAYHNKG 217
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ G+ ++AI+ F+ ++ DP + AY + + + KR +AME C
Sbjct: 218 LTLAILGQLQSAIEHFDLAIKYDPNDLNAY--------CNKSYVLNLLKRYSEAMESCNI 269
Query: 251 EKKKS-DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
K + D + I KH +A++ Y+ K P + YL +GI L +
Sbjct: 270 AIKIDPNCADSYYIKGMIFEKLGKHQDAIKNYDIAAKYNPNFAKNYLEKGISLVSLGQYS 329
Query: 310 EAEKQFEKFRRLVPR 324
+A++ F+ + +P
Sbjct: 330 KAKENFKLAIKYMPN 344
>gi|407686366|ref|YP_006801539.1| hypothetical protein AMBAS45_02890 [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407289746|gb|AFT94058.1| TPR domain-containing protein [Alteromonas macleodii str. 'Balearic
Sea AD45']
Length = 924
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 144 ANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAI 203
A PN AL + + + +K +A +++ ++ N+ +L A+ Q + AAI
Sbjct: 739 ATPNSDNALLLIAALEMSGKK-AQAFTFLEKHVQAHSNDIPSAMLLAERQ-IGKDRAAAI 796
Query: 204 KGFEEILRKDPLRVEAYHGLV-MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K +E++L K P + L +A++ DK L E+ +KA+ + +++ +D D
Sbjct: 797 KTYEQVLTKTPDNFVVLNNLAYLAFE--DKNLTRAEELAKKAVSQ---QRENADAVD--- 848
Query: 263 LIAQIKVMESKHSEALRVYEEL 284
+AQI V + + AL++YEE+
Sbjct: 849 TLAQIYVAKGDKAAALKLYEEV 870
>gi|60219539|emb|CAI56780.1| hypothetical protein [Homo sapiens]
Length = 430
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA---AI 203
N+ + L V I+ ++ EA+ +R +EL P A V +GE + A
Sbjct: 111 NNADLWYNLAIVHIELKEPNEALKNFNRALELNPKHKLALFNSAIVMQESGEVKLRPEAR 170
Query: 204 KGFEEILRKDPLRVEAYHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K + ++PL Y L M A D DKK NE E ++KA+ K ++D R
Sbjct: 171 KRLLSYINEEPLDANGYFNLGMLAMD--DKKDNEAEIWMKKAI------KLQADFRSALF 222
Query: 263 LIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRR 320
+A + +K +AL + EEL++ P + + +G I + +KKD A+K FE+
Sbjct: 223 NLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDI-LMNQKKDILGAKKCFERILE 281
Query: 321 LVPRN 325
+ P N
Sbjct: 282 MDPSN 286
>gi|418703849|ref|ZP_13264732.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|421125967|ref|ZP_15586211.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421136860|ref|ZP_15596957.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410019042|gb|EKO85870.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410436619|gb|EKP85731.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410766546|gb|EKR37230.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Hebdomadis str. R499]
Length = 284
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + A+ T E+ E K A E +Y +E ++L PND A V
Sbjct: 54 KASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLVPNDASAYYNRGLV 113
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + AI+ FE+ + +
Sbjct: 114 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIEDFEKAISLGENKNA 173
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + K +E + KA+ KK+ F+L AQ + K+S+++
Sbjct: 174 ELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYAQYGL--KKYSDSV 227
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 228 ESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 266
>gi|367001246|ref|XP_003685358.1| hypothetical protein TPHA_0D02880 [Tetrapisispora phaffii CBS 4417]
gi|357523656|emb|CCE62924.1| hypothetical protein TPHA_0D02880 [Tetrapisispora phaffii CBS 4417]
Length = 585
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 53/267 (19%)
Query: 71 LSSPLIKITSVTVAAAALLFMRLPFHSIKPAIAAPVAAAATVESTNESTKDTTSAREDVS 130
LS+ L + A LL + L + + + P A T E+ +TK+T + +
Sbjct: 174 LSTELFSDPRLMTIMATLLGVDLNMGDLNGSNSMPPTAEKTPEAPVAATKET---KTETV 230
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRI------------KSQKLVEAVDVIDRLIEL 178
E KEKE +AANP ++E ++ ++ K+ K EA++ D+ EL
Sbjct: 231 PESKEKE---PVAANPENMEVDDADVQKKLADAEKDEGNKLYKAHKFDEAIEHYDKAWEL 287
Query: 179 EPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKD-PLRVE------AYHGLVMAYDGSD 231
N+ + KA Q G+ E IK E+ + K LR + A+ + AY+
Sbjct: 288 H-NDITYLNNKAAAQYEKGDYETTIKTLEDAIEKGRELRADYKIIAKAFTRMGNAYE--- 343
Query: 232 KKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES------------------- 272
KLN+++K E + + + + L + L +IKV E+
Sbjct: 344 -KLNDLKKAAEFFNKSLTEFRTPATLTKLRSLEKKIKVQEAEAYINPEKAEEARIQGKDF 402
Query: 273 ----KHSEALRVYEELVKEEPRDFRPY 295
+ +A++ Y E++ P D R Y
Sbjct: 403 FNKGQWPDAVKAYTEMIARAPDDARAY 429
>gi|417853266|ref|ZP_12498677.1| CcmH [Pasteurella multocida subsp. multocida str. Anand1_goat]
gi|338219962|gb|EGP05550.1| CcmH [Pasteurella multocida subsp. multocida str. Anand1_goat]
Length = 304
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL P+D ++ L ++ + + K A+D R +LEP+ E++L A++ ++ ++
Sbjct: 163 HLQKQPSDAKSWWLLGQIAMNTNKGQLALDSYARAHQLEPDNIEYKLSYARILMFSEDTS 222
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY 227
KG +E++RKD +EA L Y
Sbjct: 223 DKTKGDMLLKEVIRKDHSNLEALGLLAFRY 252
>gi|378774922|ref|YP_005177165.1| cytochrome c-type biogenesis protein CcmI [Pasteurella multocida
36950]
gi|356597470|gb|AET16196.1| cytochrome c-type biogenesis protein CcmI [Pasteurella multocida
36950]
Length = 304
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL P+D ++ L ++ + + K A+D R +LEP+ E++L A++ ++ ++
Sbjct: 163 HLQKQPSDAKSWWLLGQIAMNTNKGQLALDSYARAHQLEPDNIEYKLSYARILMFSEDTS 222
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY 227
KG +E++RKD +EA L Y
Sbjct: 223 DKTKGDTLLKEVIRKDHSNLEALGLLAFRY 252
>gi|38569925|gb|AAR24495.1| TPR-repeat protein [uncultured crenarchaeote DeepAnt-EC39]
Length = 275
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P +I+AL + +K +A+ D++I++ P F + + G ++ A +
Sbjct: 44 PKNIDALYNQGLALNQLKKYQDAITCFDKVIKISPEYFAAINNRGIALAELGNTDGAFEY 103
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK-LLI 264
+ + ++ +P A++ + YD KL + E+ I+ E K + + ++ +++
Sbjct: 104 YNKAIKINPKYAAAHYNKGVLYD----KLLQHEEAIQSLDEAIKCDSGNVNTAFYRGVVL 159
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
++K KH EAL +E + ++ P+ + +G+ L K + A + F+K R+
Sbjct: 160 GKMK----KHEEALNCFENIYRKHPKHMDAFFHKGMELAELGKHERALEIFDKLLRVHEG 215
Query: 325 N 325
N
Sbjct: 216 N 216
>gi|412988935|emb|CCO15526.1| TPR repeat-containing protein [Bathycoccus prasinos]
Length = 732
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 185 WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR--IE 242
W+LL + + + AI E R DPL E L +++ NE+EK I+
Sbjct: 497 WRLL-GEAHAENDDDVRAIAAMREAHRLDPLDAEVALQLAVSH------TNELEKTEAIQ 549
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
A+ ++++ S L + K ++ +EA + E + +P++ + G++
Sbjct: 550 HAVSWLRQQQGVSHLVESKNIM--------DENEARDAFREASRLQPQNANIHAVVGVLA 601
Query: 303 TLLRKKDEAEKQFEKFRRLVPRNH 326
L R DEA + FE RL P++H
Sbjct: 602 HLTRDYDEAVRAFETAARLNPQDH 625
>gi|425062693|ref|ZP_18465818.1| Cytochrome c heme lyase subunitcmH [Pasteurella multocida subsp.
gallicida X73]
gi|404383708|gb|EJZ80154.1| Cytochrome c heme lyase subunitcmH [Pasteurella multocida subsp.
gallicida X73]
Length = 304
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL P+D ++ L ++ + + K A+D R +LEP+ E++L A++ ++ ++
Sbjct: 163 HLQKQPSDAKSWWLLGQIAMNTNKGQLALDSYARAHQLEPDNIEYKLSYARILMFSEDTS 222
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY 227
KG +E++RKD +EA L Y
Sbjct: 223 DKTKGDTLLKEVIRKDHSNLEALGLLAFRY 252
>gi|425460197|ref|ZP_18839679.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
gi|389827192|emb|CCI21792.1| Similar to tr|Q96301|Q96301 [Microcystis aeruginosa PCC 9808]
Length = 1271
Score = 39.3 bits (90), Expect = 2.7, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 15/188 (7%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE----FEWQLLKAQVQSY 195
Q + +P ++ L + + +L EA+ + I+ +P+ + L+ Q++
Sbjct: 1023 QAIKVDPTYAKSYHNLGFLAAQQGQLQEAISYYQQAIQSQPDYPTAFYNLGLVYEQLE-- 1080
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
E+E AI + ++ D VE Y L YD E + EK RC +
Sbjct: 1081 --ETEKAIACYSHSVQLDSTNVEVYKSLAQLYD-----RQENYAKAEKYY-RCALLLQPD 1132
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
+L + + + + + K +A+ ++++++ +P+D YL GI Y + +A+ F
Sbjct: 1133 NL-ELRYNLGVVLYEQKKFDKAVSCFQKIIQAKPQDAIAYLHLGISYKQQKLLTKAKSCF 1191
Query: 316 EKFRRLVP 323
EK L P
Sbjct: 1192 EKAIELDP 1199
>gi|440754069|ref|ZP_20933271.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440174275|gb|ELP53644.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 583
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 136 KEIEQHLAANPNDIEALQTLME--VRIKSQ-----KLVEAVDVIDRLIELEPN---EFEW 185
K+ EQ+ P D L L E RI SQ EA++V+++ +EL PN W
Sbjct: 149 KQAEQN---KPQDTPTLAILAEGLSRIGSQYCRSRNYTEALEVLNKALELNPNAALALGW 205
Query: 186 QLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAM 245
K G +E AIK ++ + DP AY L + ++ E EK ++
Sbjct: 206 ---KGMALRNLGCNEEAIKSLQQAITLDPSLAWAYAELGKTW----SEMGEYEKAVQNLQ 258
Query: 246 ERCKKEKKKSDL-RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRD 291
E K+E + +D + Q++ ++ EAL V +E +K EP++
Sbjct: 259 EAVKREPTLYGVYKDLGDNLCQLE----RYQEALDVLDEALKFEPQN 301
>gi|456861541|gb|EMF80191.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira weilii
serovar Topaz str. LT2116]
Length = 688
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 95/219 (43%), Gaps = 8/219 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+ E Q A +PN+ + L L V K+ EA+ ++ + N+ E L A
Sbjct: 292 YKGAEYYFRQASALSPNEAKYLYNLAVVLQKNGNKEEALKYLELARDAGANDPEIYRLIA 351
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKL--NEVEKRIEKAMERC 248
+ S + E +I ++ L+ +P +++ L AY L E +RI +
Sbjct: 352 EGFSNLNQGEMSISALQKSLKYNPTDIDSLFQLAEAYYNKGDLLAAEETYRRIVSSTP-- 409
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
++ L + +++ Q++ ++SEA+ +++ P++ + Y G++Y
Sbjct: 410 GDSFTETALINLGVVLDQME----RYSEAITALNRVIELNPKNAKAYHTLGLVYKHSGNG 465
Query: 309 DEAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVD 347
A + + K + P N RE D ++ K F E VD
Sbjct: 466 TLAIENWRKSTAIEPENVQSREALGDYLLENKFFREAVD 504
>gi|397691233|ref|YP_006528487.1| tetratricopeptide TPR_2 [Melioribacter roseus P3M]
gi|395812725|gb|AFN75474.1| tetratricopeptide TPR_2 [Melioribacter roseus P3M]
Length = 1052
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 129 VSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLV-------EAVDVIDRLIELEPN 181
+ Y++ + + ++LA P D + ++VR + A+ +D+LIEL+P
Sbjct: 357 IEYDDAIEVLSEYLADKPEDSD-----LDVRYAYARYCAWNYEWERAIAQLDKLIELDPE 411
Query: 182 EFEWQLLKAQVQSYAG-ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKR 240
+++LL+AQ+ + + + A K E++ K P ++AY LV Y K +E +K
Sbjct: 412 NTDYKLLRAQIAVWTVLDLDLAEKYLLEVIDKKPRELQAYLSLVSLYSWK-KNFDEAKKY 470
Query: 241 IEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR 290
++ A + + L+A + ES + L YEEL E R
Sbjct: 471 LDIAKQLAPNSQ----------LVASV---ESTYELHLSAYEELKALEIR 507
>gi|406982126|gb|EKE03486.1| SLEI family protein [uncultured bacterium]
Length = 266
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 135 EKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS 194
+KE+ + + +PN IEA L V S ++ ++ + ++IE P+ +
Sbjct: 119 QKELHKAIKIDPNYIEAQFQLAVVHELSNEIDMSMKIYQKIIEERPSYIAAYNNLGSLYI 178
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKK 233
G AA++ F+E++R +P V AY G+ +AYD + K
Sbjct: 179 RLGMLTAAVEIFKELIRINPDFVRAYLGIAVAYDKMNAK 217
>gi|421262710|ref|ZP_15713807.1| CcmH [Pasteurella multocida subsp. multocida str. P52VAC]
gi|401690581|gb|EJS85820.1| CcmH [Pasteurella multocida subsp. multocida str. P52VAC]
Length = 304
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL P+D ++ L ++ + + K A+D R +LEP+ E++L A++ ++ ++
Sbjct: 163 HLQKQPSDAKSWWLLGQIAMNTNKGQLALDSYARAHQLEPDNIEYKLSYARILMFSEDTS 222
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY 227
KG +E++RKD +EA L Y
Sbjct: 223 DKTKGDTLLKEVIRKDHSNLEALGLLAFRY 252
>gi|220909066|ref|YP_002484377.1| hypothetical protein Cyan7425_3697 [Cyanothece sp. PCC 7425]
gi|219865677|gb|ACL46016.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7425]
Length = 293
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 86/194 (44%), Gaps = 7/194 (3%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E K +Q L +P ++A Q L +V I+ QK A+ + +EL+P++ + L
Sbjct: 92 EGAMKTYQQALKIDPQLVDAHQGLCQVLIEQQKAALAIASCKKAVELKPSDAQTHLFLGV 151
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ + A F + L DP V+AY+ L A + +KL+E E A R
Sbjct: 152 AFLAQRQWQRAEMSFRKTLALDPNHVDAYYQLGYALL-AQEKLSEA----EAAFRRSIAM 206
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ +++L L V + + A+ Y + ++ P YL G +YT + EA
Sbjct: 207 EPQANLTYIGL--GDALVAQEQFEAAISAYRQSIQRVPAYPLAYLRLGNLYTRQNRWAEA 264
Query: 312 EKQFEKFRRLVPRN 325
+++ ++ P +
Sbjct: 265 IAIYQQVVKIYPND 278
>gi|406910680|gb|EKD50637.1| hypothetical protein ACD_62C00471G0002 [uncultured bacterium]
Length = 330
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 35/208 (16%)
Query: 147 NDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE----FEWQLLKAQVQSYAGESEAA 202
N E L + + + EAV + + EL PN+ ++ L +Q YA E+E+
Sbjct: 80 NQAEMYYYLGKAHTQQGQASEAVAALLKATELNPNDANVWYQLGLSYGVLQDYAKEAES- 138
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV--------------EKRIEKAMERC 248
+++ + P AY+ L +AY G K + E I +
Sbjct: 139 ---YQKSIALKPDAPNAYYNLGLAYQGLGKFAESIDAFKRALVISPKHEEAMISSGLANV 195
Query: 249 KKEKKKSDLRDFKLLI-------------AQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
+ ++ L F+ +I + + K+ EA Y+ VK +P+ + Y
Sbjct: 196 RLQRYSEALLSFQRVIEINANNAQAHFYQGYVLIKMGKNHEAYLAYQAAVKADPKFTKAY 255
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
G++ L+K DE + ++K L P
Sbjct: 256 FQLGLLCFDLKKYDEEIENYKKVIELDP 283
>gi|407465851|ref|YP_006776733.1| hypothetical protein NSED_10025 [Candidatus Nitrosopumilus sp. AR2]
gi|407049039|gb|AFS83791.1| hypothetical protein NSED_10025 [Candidatus Nitrosopumilus sp. AR2]
Length = 303
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%)
Query: 120 KDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELE 179
K T +E+++Y+E K +Q L +PN++EAL + I+ A D+ +E+
Sbjct: 33 KGTYYFKEEINYQESMKYFDQVLLLDPNNVEALNGKGAIFIRYGNFTAAEYFFDKALEIN 92
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA 219
PN + K + + + E + F++IL +P A
Sbjct: 93 PNHIKTLNNKGTLVGHLEKYEESRVYFDKILLMEPNNTNA 132
>gi|336323913|ref|YP_004603880.1| hypothetical protein Flexsi_1664 [Flexistipes sinusarabici DSM
4947]
gi|336107494|gb|AEI15312.1| Tetratricopeptide TPR_1 repeat-containing protein [Flexistipes
sinusarabici DSM 4947]
Length = 248
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
+E E+ L PND + + +K KL++A ++R IEL+P+ ++ A +
Sbjct: 46 REFEKALKYKPNDAKTHYAIATFYLKHNKLLKAQKYLERAIELDPSNSDYHNAYASTLAS 105
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLV---MAYDGSDKKLNEVEKRIEKAMERCKK 250
G E A+K ++ +L +DP HG++ M Y K R ++A+E K+
Sbjct: 106 LGNVEKAVKQWKIVL-EDPGYPN--HGMIYYNMGYSLYGK------GRYDRALEYFKR 154
>gi|148264943|ref|YP_001231649.1| hypothetical protein Gura_2904 [Geobacter uraniireducens Rf4]
gi|146398443|gb|ABQ27076.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 265
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 11/211 (5%)
Query: 116 NESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRL 175
+E + S E Y + E + P++ E L E +S K EA+ I
Sbjct: 6 DERLAEGISLLETGEYGKAATEFSACIEIEPDNPEGYFCLGEALAESGKQDEAIKTITAG 65
Query: 176 IELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLN 235
+EL P++ E + G + AI ++++ P + Y + + Y+ S ++++
Sbjct: 66 LELAPDDVEALTALGDLYFEGGRHKDAIACYKKVTDLRPKEADGYVSIGLVYN-SLERVD 124
Query: 236 EVEKRIEKAMERCKKEKKKSDLRDFKLL--IAQIKVMESKHSEALRVYEELVKEEPRDFR 293
+ +K A+E D + L + + K+ EA+ Y + ++ +P D
Sbjct: 125 DAQKAFNSALE--------VDPHNVFALNALGDLYYGLGKNDEAVAAYRKGIEIDPDDAT 176
Query: 294 PYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
Y G +Y L D AEK+ + RL P
Sbjct: 177 AYFNLGDLYYDLGDLDAAEKETLEAIRLDPN 207
>gi|329961601|ref|ZP_08299660.1| caspase domain protein [Bacteroides fluxus YIT 12057]
gi|328531593|gb|EGF58427.1| caspase domain protein [Bacteroides fluxus YIT 12057]
Length = 919
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 52/97 (53%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+Y+E+EK +E+ +A P ++ L L+ V I + + + + IDR++ ++PN + +K
Sbjct: 184 NYDEQEKILEKAIAKYPVSLDFLYNLVNVHIATNNMPKLLAAIDRILTVDPNNDKVLPIK 243
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
A++ G++ A+ ++ + P E G+ A
Sbjct: 244 ARILERQGKNLEALDIYKRLYALYPNSFELLTGVARA 280
>gi|212550540|ref|YP_002308857.1| hypothetical protein CFPG_183 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548778|dbj|BAG83446.1| conserved hypothetical protein [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 580
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
PN FE++L A + G + AI +EE+++ +P +E Y+ L SD L ++
Sbjct: 103 PNNFEYKLALANLSRELGNNNLAIILYEELIKGNPQNLELYYCL------SD--LYVKQQ 154
Query: 240 RIEKAMERCKKEKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQ 298
+ KA+ K + + D L +Q+ + K +ALR + L ++ P + + +
Sbjct: 155 NVNKAIRVLNKIENSIGINEDIALKKSQLYKLIGKKKQALRALKYLAEKFPTEAKYQIFI 214
Query: 299 GIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFV--DNMVATK 340
G Y + +EA +E+ + + P N YFV N ATK
Sbjct: 215 GDFYLDENEIEEALLYYERSKIMDPNN---LYYFVAMSNYYATK 255
>gi|386346743|ref|YP_006044992.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339411710|gb|AEJ61275.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 654
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
++E E+E + L + N +EA L +V + EA+D +D + P+ E LK
Sbjct: 208 WDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDGFLGARPDSREGWYLKG 267
Query: 191 QVQSYAGESEAAIKGFEEILRKDP 214
V E +++ F E+L + P
Sbjct: 268 VVLDRLDRPEESLRAFREVLERYP 291
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 10/193 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE E+ L+ P ++EA + E+ + ++ A+ +R + + P + + A
Sbjct: 107 EEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRMFPEHKKILTILAF 166
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ Y GE + A EE LR P E H L + ++ +E E+ +A+ +
Sbjct: 167 LYEYRGERDKAASYLEEALRLYPSDPEV-HLLAASSHLRKEEWDEAEREARRALTLDENA 225
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ S L+AQ+ + + EAL + + P + +G++ L + D
Sbjct: 226 VEAS------YLLAQVATGKGRFQEALDHLDGFLGARPDSREGWYLKGVV---LDRLDRP 276
Query: 312 EKQFEKFRRLVPR 324
E+ FR ++ R
Sbjct: 277 EESLRAFREVLER 289
>gi|407462460|ref|YP_006773777.1| O-linked GlcNAc transferase [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046082|gb|AFS80835.1| O-linked GlcNAc transferase [Candidatus Nitrosopumilus koreensis
AR1]
Length = 366
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 5/110 (4%)
Query: 118 STKDTTSAREDVSYEEKEKE-----IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVI 172
S D + + + +E E E L + P +IEAL L E+ + K +++ +
Sbjct: 186 SNTDALNGKGKIFFELDEYEKSRIAFTAVLESEPENIEALLGLSELNLHEHKNIKSQQMY 245
Query: 173 DRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
++++ ++P+ E + KA V G+ + A++ F+E L DP +A +G
Sbjct: 246 EKILSIDPDNIEALIGKASVLVELGKFDEALEYFDEALEVDPDNPDALNG 295
>gi|255528197|ref|ZP_05395020.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
P7]
gi|296184633|ref|ZP_06853044.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
gi|255508112|gb|EET84529.1| Tetratricopeptide TPR_2 repeat protein [Clostridium carboxidivorans
P7]
gi|296050415|gb|EFG89838.1| tetratricopeptide repeat protein [Clostridium carboxidivorans P7]
Length = 698
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y++ +K + + P + A L + + ++ EA+D+I+++I ++PN++ + A
Sbjct: 300 YDDAKKMYNKEIELYPESVNAYYGLALLYEELEEFKEALDIIEKIIVIDPNDYNAYKMIA 359
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERC 248
+Q + A K ++ + +P +AY +G+++ KL KR E++ E C
Sbjct: 360 NIQVNMRNYDIAEKQYKNAININPNYGDAYNDYGVLLY------KL----KRYEESKELC 409
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKH-----SEALRVYEELVKEEPRDFRPYLCQGIIYT 303
KK DL ++ + + S + EA++VYE ++ P + Y C + T
Sbjct: 410 ---KKAIDLNPYECIYYN-NLANSLNELGLLGEAMQVYETAIRFNPNNSELY-CN--LAT 462
Query: 304 LLRKKDEAE---KQFEKFRRLVPR 324
L+K + E K +EK L P+
Sbjct: 463 ALQKSNNIEDAIKNYEKSIELNPK 486
>gi|148252153|ref|YP_001236738.1| caspase-like domain-containing protein [Bradyrhizobium sp. BTAi1]
gi|146404326|gb|ABQ32832.1| putative Peptidase, Caspase-like domain and TPR repeats
[Bradyrhizobium sp. BTAi1]
Length = 518
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K + +AANP D AL +V +A+ D I L P + E + ++
Sbjct: 360 KSLTAKIAANPEDAGALYRRGQVYASKGAYAQAIRDFDDTIRLNPKDVEALNNRCWARTV 419
Query: 196 AGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKK 233
GE +AA++ E LR P V+A GLV G+ K
Sbjct: 420 VGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGATKN 459
>gi|383755905|ref|YP_005434890.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
gi|381376574|dbj|BAL93391.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
Length = 946
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 82/188 (43%), Gaps = 11/188 (5%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E A+P + A L ++R+++ A+ V+ L++ P + L ++ +G
Sbjct: 449 LEASFKADPKQLAAGTALAQIRLQAGDNKRAIQVLQTLLQSHPKQAGLLNLLGSAKARSG 508
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
++ A + FE+ L DP V L D KL+ ++R+++A+ + K + +
Sbjct: 509 DTAGARQAFEQALALDPGFVSPQVQLAR-LDADAGKLDAAQQRLQQALAKDDKALEPT-- 565
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVK-EEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
L +A + + EA R YE+ P P L + L ++D+ E E
Sbjct: 566 ----LEVAHLAERRGRIDEARRWYEKADDLAGPNVIDPALE---LVDFLLRQDQPEAARE 618
Query: 317 KFRRLVPR 324
+RL R
Sbjct: 619 AGKRLSNR 626
>gi|301060056|ref|ZP_07200929.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300445819|gb|EFK09711.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 751
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
A D++ LI+ P + ++L A G+ +A ++ E ++++P + L +AY
Sbjct: 252 AEDILTELIKAHPEKISYRLALAAFLKSKGQRQAMLEVLERCIKENPEAYKPCEMLSLAY 311
Query: 228 DGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
+ +E + ++ MER K + KL+ A I E K EAL++ E++ E
Sbjct: 312 -LEEGHYDEALQVMDGFMERVKT---GPEFLQAKLVKATIYFKEKKMDEALKLVREVLDE 367
Query: 288 EPRDFRPYLCQGII 301
PRD + + + I
Sbjct: 368 NPRDVKAHALKADI 381
>gi|254447897|ref|ZP_05061362.1| hypothetical protein GP5015_186 [gamma proteobacterium HTCC5015]
gi|198262677|gb|EDY86957.1| hypothetical protein GP5015_186 [gamma proteobacterium HTCC5015]
Length = 585
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 109/258 (42%), Gaps = 49/258 (18%)
Query: 102 IAAP-VAAAATV----ESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPN--------- 147
+A P +AAAA V E ++ K A+E YE+ + E+ LA NPN
Sbjct: 81 VAVPRLAAAAEVMQDEEVAQQAAKAALYAKE---YEKTQAAAERWLAINPNSSAAYRYAA 137
Query: 148 -------DIEALQTLMEVRIK-----SQKLVE-------------AVDVIDRLIELEPNE 182
D EA T + RI+ L+E ++ V +L EL P E
Sbjct: 138 VAALRQGDAEAATTYFDARIQLATSARAGLLETIALLVSEDTSETSIAVARQLPELYPEE 197
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
+ KA V++ +SEAA+ E+L++ P + A VM + L +E+ E
Sbjct: 198 DKAYFAKATVEARFEQSEAALDSINELLQRAPDDLSA----VML---KAQILESLERGDE 250
Query: 243 KAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIY 302
+ D + +L A++ + E ++ +A Y+++ +E+P + + G +
Sbjct: 251 ALTLLSDTLEVHPDHNELRLTYARLLIQEHRYFDARAEYQKMFQEQPHNVDLAMRLGFLS 310
Query: 303 TLLRKKDEAEKQFEKFRR 320
L + DEA+ F R
Sbjct: 311 LELMELDEADNYFSHVLR 328
>gi|193216010|ref|YP_001997209.1| hypothetical protein Ctha_2311 [Chloroherpeton thalassium ATCC
35110]
gi|193089487|gb|ACF14762.1| TPR repeat-containing protein [Chloroherpeton thalassium ATCC
35110]
Length = 595
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 89/225 (39%), Gaps = 40/225 (17%)
Query: 132 EEKEKEIEQHLAA---NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL 188
+E EK IE + AA PN ++AL L + ++ EA+ V+ I+ +P+
Sbjct: 293 QEYEKAIEFYKAALEIKPNTVDALNALGVCYLNLERYNEAISVLKLAIDYDPS------- 345
Query: 189 KAQVQSYAGES-------EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEV---- 237
K Q+ S G + + AI FE+ + + Y+G+ ++Y + K+N +
Sbjct: 346 KPQIYSNLGTAYFSSDRFQDAIAAFEKAVSLNDKLAYPYYGIGISYYSLESKMNMLSSLN 405
Query: 238 ------EKRIEKAMERCKKE-------------KKKSDLRDFKLLIAQIKVMESKHSEAL 278
+ K K E K + DL + + +A+
Sbjct: 406 ASIYVRSGSLGKNANAAKNERFQNIIEPLEHAVKLRPDLASAHFGLGMAYLETGLFGKAI 465
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ + V+ P + + G +Y L K EA+K E+ +L P
Sbjct: 466 EAFNQAVRFNPEFAQAFAGLGSVYMKLGYKGEAKKALEEAIKLKP 510
>gi|145479265|ref|XP_001425655.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392727|emb|CAK58257.1| unnamed protein product [Paramecium tetraurelia]
Length = 1062
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
K +K +A+ D I+ P E E+ KA + A+K ++ ++K+P + Y
Sbjct: 308 KMKKYKQALKWFDLAIKKNPEESEYYCNKAMTLDKLARHKEALKYYDLAIKKNPNESDYY 367
Query: 221 HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRV 280
+ M D K+N ++ +E +K +DL + K ++ EAL
Sbjct: 368 NNKAMTLD----KMNRFKEALECYDLAIQKNPDDADLYNNK---GDTLDRLGRYEEALEN 420
Query: 281 YEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFE 316
Y+ +++ P D YL +GI+ +L + EA K ++
Sbjct: 421 YDLAIQKNPEDSVYYLNKGIVLNMLDRHQEALKYYD 456
>gi|425446305|ref|ZP_18826313.1| Similar to tr|Q7NMJ3|Q7NMJ3 [Microcystis aeruginosa PCC 9443]
gi|389733534|emb|CCI02718.1| Similar to tr|Q7NMJ3|Q7NMJ3 [Microcystis aeruginosa PCC 9443]
Length = 251
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 81/176 (46%), Gaps = 17/176 (9%)
Query: 165 LVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLV 224
V++++ + + ++L PN + +++ Q A + AA EE ++ P V AY+ L
Sbjct: 69 FVKSIEALKKSVQLNPNHLDGRVILGWTQHLAKQPLAAQTTLEETIKIAPDHVAAYNALG 128
Query: 225 MAYDGSDKKLNEVEKRIEKAM---ERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVY 281
+ Y V +EKA+ + K +++ + L +A ++ + A+
Sbjct: 129 IVY--------LVGGHLEKAVVTHTKAANLKPDNEIAYYNLSLAYHRLKD--FDSAINNA 178
Query: 282 EELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE-YFVDNM 336
++ VK EP + P + +IY +A+ + K R L R YR+ +F+ ++
Sbjct: 179 KKAVKLEPNNPHPLVALAMIYLDQGDSKKAQDTYRKARDLDGR---YRQKWFLAHL 231
>gi|118369961|ref|XP_001018183.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89299950|gb|EAR97938.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 3418
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 44/208 (21%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ 186
+D Y E ++ NP + E L + ++I +A +ID+LIEL+P ++
Sbjct: 2903 QDQQYLEALIHYQKQTQINPENTEILFKMALIQISYDNFNQAKQLIDKLIELKPQDYLVY 2962
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
+A + G + AIK F++ L P L + + +
Sbjct: 2963 SAQAYLYKRQGNLQEAIKSFDQSLSIQPTNTFTLFNLALCHG---------------ELG 3007
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
K+EKK +Y+E+ K P D + GIIY R
Sbjct: 3008 NIKQEKK--------------------------MYKEIQKISPNDRKMLNNLGIIY---R 3038
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVD 334
+K + EK + F + + + + +YF +
Sbjct: 3039 QKGKYEKAIQLFSQCIKLDQYFCDYFTN 3066
>gi|145515363|ref|XP_001443581.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410970|emb|CAK76184.1| unnamed protein product [Paramecium tetraurelia]
Length = 1153
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%), Gaps = 25/202 (12%)
Query: 122 TTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN 181
T + E + + +K EIE PN I+AL + K EA+DVI++++ + PN
Sbjct: 288 TENYDEALVWADKVLEIE------PNHIKALDCKIYCLSILGKYKEALDVIEKVLHINPN 341
Query: 182 EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA----YHGLVMAYDGSDKKLNEV 237
+ K G+ + +I+ + +L++DP + +GLVM
Sbjct: 342 HLNSMINKVNCLRELGQYQKSIQLADVVLKQDPKNINILFCKLYGLVMV----------- 390
Query: 238 EKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES--KHSEALRVYEELVKEEPRDFRPY 295
+ ++A+E C + + + K+L +I+ + K+ EA+++ ++ + E+
Sbjct: 391 -GKCQEALE-CAENALVENPNNSKILYCKIQSLFGLQKYEEAIQLIDKTLSEDSNQVNLL 448
Query: 296 LCQGIIYTLLRKKDEAEKQFEK 317
+ I + +K EA+K +K
Sbjct: 449 SVKAKILFVQKKTSEAQKVVDK 470
>gi|423223567|ref|ZP_17210036.1| hypothetical protein HMPREF1062_02222 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392638192|gb|EIY32039.1| hypothetical protein HMPREF1062_02222 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 583
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 29/221 (13%)
Query: 112 VESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
+E++ KD SA D+ ++ L NPN AL + + + +++ +
Sbjct: 51 LEASRLKMKDDYSAAFDL--------LQHCLTINPNASSALYEISQYYMYLKQVPQGQAA 102
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEIL-----RKDPLR--VEAYHGLV 224
+++ +E +P+ + + A + E + A E + R DPL ++ Y+ L
Sbjct: 103 LEKAVENDPDNYWYSQGLASLYQQQNEMQKATNLLESMATRFSDRMDPLYSLLDIYNRLE 162
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
YD LN +E+++ K E+ EK + I + + + A R E L
Sbjct: 163 -EYDNVITTLNRLEEKMGKN-EQLSMEKFR------------IYLQKKDNQSAFREIESL 208
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
V+E P D R + G +Y KKDEA ++K P N
Sbjct: 209 VEEYPMDMRYQVILGDVYMQNDKKDEAYNIYKKVLATEPDN 249
>gi|363729328|ref|XP_003640630.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Gallus gallus]
Length = 817
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A++ +R + P + +WQL+ A +G + A++
Sbjct: 618 PSNIEVIEWLGAYCIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEK 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI 241
++ I +K P VE LV +D L EV++ +
Sbjct: 678 YKVIHQKFPENVECLRFLVRL--CTDMGLKEVQEYM 711
>gi|118400640|ref|XP_001032642.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89286985|gb|EAR84979.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1356
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 91/177 (51%), Gaps = 8/177 (4%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQS-YAGESE 200
L +PN+ E L + + + + +++ ++++ + E +L AQ+Q+ + +
Sbjct: 1009 LKIDPNNHECKLKLGLLLQQIHDYENSYNYLEQYLQIKEDSIEARLAIAQLQAIFKKNNL 1068
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDF 260
+AIK ++ IL K P +A L ++ +++ E++I + ++ ++K L+
Sbjct: 1069 SAIKQYQIILEKQPENQQALLELSCLFE-KNQQFELAEQQISEYIKIYPNDEKGFILK-- 1125
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
A++ + K++EA +++++ P++F Y G I +L+K DE+E +EK
Sbjct: 1126 ----AKLNMRNQKYNEAYLNFQKIISINPQNFMAYTNLGDICKILKKFDESEIYYEK 1178
>gi|398344171|ref|ZP_10528874.1| hypothetical protein LinasL1_14212 [Leptospira inadai serovar Lyme
str. 10]
Length = 1195
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRI-----------KSQKLVEAVDVIDRLIELE 179
Y+E EK E+ A +P A Q+ R+ KS+ EA+ + +
Sbjct: 205 YDEAEKYFEKARATDPELASAKQSASATRVASMLEKGNSALKSKNYREAIAHFTSATQTD 264
Query: 180 PNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSD---KKLNE 236
P + + AG+ + A+K FE LR EAY GL AY+ S K ++
Sbjct: 265 PKNASPLVFLGNAKILAGDLDGAVKAFESSLRLKADYWEAYSGLAAAYNKSGNYPKAIST 324
Query: 237 VEKRI 241
+EK I
Sbjct: 325 LEKAI 329
>gi|359780687|ref|ZP_09283913.1| cellulose synthase operon protein C [Pseudomonas psychrotolerans
L19]
gi|359371999|gb|EHK72564.1| cellulose synthase operon protein C [Pseudomonas psychrotolerans
L19]
Length = 1005
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 163 QKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
++L +A D+ I L+P E QL A +QS + E A + ++L ++P V+AY+G
Sbjct: 106 RELDQARDLSVEAIRLKPEAVEAQLFLAGIQSQKRQWELAEATYRQVLMREPANVDAYYG 165
Query: 223 LVMAYD--GSDKKLNEVEK----------------RIEKAMERCKKEKKKSDLRDFKLLI 264
+ A + G ++ ++ K R +AM+ + + + DL+ L+
Sbjct: 166 RIAALNELGRTEEALQLTKNLQPSAKNQVKGLDRLRAGQAMQEAEAAEARGDLQGASRLL 225
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEK 313
Q + ES LR+ + + E R RP + ++ +L+ KD A++
Sbjct: 226 EQAR-QESPEDPWLRLAQ--ARLEVRQGRPRAARDLVDSLV--KDGAQR 269
>gi|88603055|ref|YP_503233.1| hypothetical protein Mhun_1793 [Methanospirillum hungatei JF-1]
gi|88188517|gb|ABD41514.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 213
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 114 STNESTKDTTSAREDVSYEEKEKE-----IEQHLAANPNDIEALQTLMEVRIKSQKLVEA 168
S S D +A+ ++ Y++ + + ++Q LA +P +EAL +V + EA
Sbjct: 23 SVVASPADELAAQGNMLYDQDQYDEALIILDQALAIDPEHLEALNGKGKVLKSLGRYEEA 82
Query: 169 VDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
+ D++I ++P + K +Y G E AI F+E LR DP +AY
Sbjct: 83 IQQYDKIIAVDPTYKKAWNNKGIALTYLGRYEEAIAMFDESLRLDPEYGKAY 134
>gi|417763192|ref|ZP_12411172.1| tetratricopeptide repeat protein [Leptospira interrogans str.
2002000624]
gi|417774022|ref|ZP_12421897.1| tetratricopeptide repeat protein [Leptospira interrogans str.
2002000621]
gi|417784075|ref|ZP_12431787.1| tetratricopeptide repeat protein [Leptospira interrogans str.
C10069]
gi|418669062|ref|ZP_13230461.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418673442|ref|ZP_13234761.1| tetratricopeptide repeat protein [Leptospira interrogans str.
2002000623]
gi|418690256|ref|ZP_13251372.1| tetratricopeptide repeat protein [Leptospira interrogans str.
FPW2026]
gi|418710732|ref|ZP_13271500.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418714279|ref|ZP_13274839.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
08452]
gi|418734748|ref|ZP_13291179.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
12758]
gi|421115462|ref|ZP_15575868.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|400360441|gb|EJP16413.1| tetratricopeptide repeat protein [Leptospira interrogans str.
FPW2026]
gi|409940892|gb|EKN86529.1| tetratricopeptide repeat protein [Leptospira interrogans str.
2002000624]
gi|409952906|gb|EKO07413.1| tetratricopeptide repeat protein [Leptospira interrogans str.
C10069]
gi|410012946|gb|EKO71031.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410576493|gb|EKQ39500.1| tetratricopeptide repeat protein [Leptospira interrogans str.
2002000621]
gi|410579497|gb|EKQ47339.1| tetratricopeptide repeat protein [Leptospira interrogans str.
2002000623]
gi|410755268|gb|EKR16899.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410768954|gb|EKR44199.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410772620|gb|EKR52661.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
12758]
gi|410789222|gb|EKR82924.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
08452]
Length = 284
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + A+ T E+ E K A E +Y +E ++L PND A V
Sbjct: 54 KASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLVPNDASAYYNRGLV 113
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + AI+ FE+ + +
Sbjct: 114 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIEDFEKAISLGENKNA 173
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + K +E + KA+ KK+ F+L AQ + K+S+++
Sbjct: 174 ELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYAQYGL--KKYSDSV 227
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 228 ESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 266
>gi|403373486|gb|EJY86662.1| TPR Domain containing protein [Oxytricha trifallax]
Length = 890
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
NP I+ + L K + +A+ +R +++P E +WQL+ A A+K
Sbjct: 710 NPAKIDVISCLGMHHAKQDQFEKAIIYFERAYQIQPKEVKWQLMIASCYRRMNLFNEALK 769
Query: 205 GFEEILRKDPLRVEAYHGLV 224
+E+I ++P ++ GLV
Sbjct: 770 VYEDIHAENPDNIDCLRGLV 789
>gi|326914341|ref|XP_003203484.1| PREDICTED: intraflagellar transport protein 88 homolog [Meleagris
gallopavo]
Length = 818
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A++ +R + P + +WQL+ A +G + A++
Sbjct: 618 PSNIEVIEWLGAYCIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEK 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI 241
++ I +K P VE LV +D L EV++ +
Sbjct: 678 YKVIHQKFPENVECLRFLVRL--CTDMGLKEVQEYM 711
>gi|386393125|ref|ZP_10077906.1| Tfp pilus assembly protein PilF [Desulfovibrio sp. U5L]
gi|385734003|gb|EIG54201.1| Tfp pilus assembly protein PilF [Desulfovibrio sp. U5L]
Length = 865
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
+++ E E + + P + TL V+++ Q + A ++ + +E+EP +L
Sbjct: 662 WDQAEAEAAKFIELAPGAADGYITLASVKLQRQDVPGAESLLRQALEVEPASIGARLDLG 721
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK 232
+ AG+ E A + F+E + K P EAY MA+ + K
Sbjct: 722 ALLMRAGKVEEACRHFDEAIAKSPKPAEAYAARGMAWQAAGK 763
>gi|417766834|ref|ZP_12414783.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|418723829|ref|ZP_13282663.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
12621]
gi|400350640|gb|EJP02898.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|409962627|gb|EKO26361.1| tetratricopeptide repeat protein [Leptospira interrogans str. UI
12621]
Length = 284
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + A+ T E+ E K A E +Y +E ++L PND A V
Sbjct: 54 KASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLVPNDASAYYNRGLV 113
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + AI+ FE+ + +
Sbjct: 114 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIEDFEKAISLGENKNA 173
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + K +E + KA+ KK+ F+L AQ + K+S+++
Sbjct: 174 ELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYAQYGL--KKYSDSV 227
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 228 ESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 266
>gi|224536558|ref|ZP_03677097.1| hypothetical protein BACCELL_01433 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521814|gb|EEF90919.1| hypothetical protein BACCELL_01433 [Bacteroides cellulosilyticus
DSM 14838]
Length = 585
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 29/221 (13%)
Query: 112 VESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDV 171
+E++ KD SA D+ ++ L NPN AL + + + +++ +
Sbjct: 53 LEASRLKMKDDYSAAFDL--------LQHCLTINPNASSALYEISQYYMYLKQVPQGQAA 104
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEIL-----RKDPLR--VEAYHGLV 224
+++ +E +P+ + + A + E + A E + R DPL ++ Y+ L
Sbjct: 105 LEKAVENDPDNYWYSQGLASLYQQQNEMQKATNLLESMATRFSDRMDPLYSLLDIYNRLE 164
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
YD LN +E+++ K E+ EK + I + + + A R E L
Sbjct: 165 -EYDNVITTLNRLEEKMGKN-EQLSMEKFR------------IYLQKKDNQSAFREIESL 210
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
V+E P D R + G +Y KKDEA ++K P N
Sbjct: 211 VEEYPMDMRYQVILGDVYMQNDKKDEAYNIYKKVLATEPDN 251
>gi|284039246|ref|YP_003389176.1| hypothetical protein Slin_4396 [Spirosoma linguale DSM 74]
gi|283818539|gb|ADB40377.1| Tetratricopeptide TPR_2 repeat protein [Spirosoma linguale DSM 74]
Length = 602
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME-RCKKEKKKSDLRDF 260
AI F ++L+KDP A + AY S K + +A+ K D + +
Sbjct: 87 AITQFAKVLQKDPNNAAAQYSTASAYLKSGK--------VTEALPFAAKAHALDVDNKFY 138
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
LL+A++ V + ++ EA +YE L+K+ P + + IY K D+A + + K R
Sbjct: 139 SLLLAELYVKQKRYGEAEDLYEALLKKGPENAEYGVELAAIYLFNEKPDKALEAYNKVER 198
Query: 321 LVPRN 325
+ N
Sbjct: 199 ELGLN 203
>gi|118085018|ref|XP_417145.2| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Gallus gallus]
Length = 821
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A++ +R + P + +WQL+ A +G + A++
Sbjct: 618 PSNIEVIEWLGAYCIDTQFCEKAIEYFERAALILPTQVKWQLMVASCYRRSGNYQKALEK 677
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI 241
++ I +K P VE LV +D L EV++ +
Sbjct: 678 YKVIHQKFPENVECLRFLVRL--CTDMGLKEVQEYM 711
>gi|222053755|ref|YP_002536117.1| family 2 glycosyl transferase [Geobacter daltonii FRC-32]
gi|221563044|gb|ACM19016.1| glycosyl transferase family 2 [Geobacter daltonii FRC-32]
Length = 3011
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 81/218 (37%), Gaps = 39/218 (17%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL-------------- 187
LA +P D+E L L ++ + K +A R +E+EP W L
Sbjct: 1197 LAMHPKDLEVLAGLGKICVSVGKHDDARHFFTRALEIEP----WNLEIRKSLEALEEFRR 1252
Query: 188 -------------LKAQVQSYAGE--SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDK 232
+ + AG + AI E +L+ P A++ L + Y +
Sbjct: 1253 QPEQIGPAATVEEMYGKAVDLAGRNLTAEAIAALENLLQHFPQFALAHNDLGVLYGQQGQ 1312
Query: 233 KLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF 292
+ V E A +L DF ++ + +AL++Y +L+ +P+D
Sbjct: 1313 QDQAVAHHEEAARLEPGNGTFLKNLADFYHMVM------GRTEQALQIYVKLLAVQPKDL 1366
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE 330
+ G + + K D+ E F + + P N RE
Sbjct: 1367 EVLMALGNLCVAIGKLDDGECFFTRAMEIEPWNREVRE 1404
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 36/215 (16%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY------ 195
LA P D+E L L + + KL + R +E+EP E + A V+ Y
Sbjct: 1359 LAVQPKDLEVLMALGNLCVAIGKLDDGECFFTRAMEIEPWNREVRESLAAVKEYRETAQA 1418
Query: 196 -AGESEAA---------------IKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK 239
G +E+A I E++L + P A++ L + Y +EK
Sbjct: 1419 DMGVAESAYAEIQALPEDQVEQKIAALEKLLCRHPNFATAHNDLGVLYTNQ----GAMEK 1474
Query: 240 RIEKAMERCKKEKKKS----DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
+E E + E + +L DF ++ + EAL++Y +L+ +P+D
Sbjct: 1475 ALEHQEEATRLEPTNAVFQKNLADF------YHIVLGRTEEALQIYVKLLAVKPKDLEVL 1528
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE 330
G + L + D+A F + + P N R+
Sbjct: 1529 TALGNLCLSLDRLDDAACFFTRALEVEPWNAEIRQ 1563
>gi|406595507|ref|YP_006746637.1| hypothetical protein MASE_02615 [Alteromonas macleodii ATCC 27126]
gi|406372828|gb|AFS36083.1| TPR domain-containing protein [Alteromonas macleodii ATCC 27126]
Length = 924
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 144 ANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAI 203
A PN AL + + + +K +A +++ ++ N+ +L A+ Q + AAI
Sbjct: 739 ATPNSDNALLLIAALEMSGKK-AQAFTFLEKHVQAHSNDIPSAMLLAERQ-IGNDRAAAI 796
Query: 204 KGFEEILRKDPLRVEAYHGLV-MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKL 262
K +E++L K P + L +A++ DK L E+ +KA+ +++ +D D
Sbjct: 797 KTYEQVLTKTPDNFVVLNNLAYLAFE--DKNLTRAEELAKKAVSL---QRENADAVD--- 848
Query: 263 LIAQIKVMESKHSEALRVYEEL 284
+AQI V + + AL++YEE+
Sbjct: 849 TLAQIYVAKGDKAAALKLYEEV 870
>gi|24215503|ref|NP_712984.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|386074738|ref|YP_005989056.1| hypothetical protein LIF_A2287 [Leptospira interrogans serovar Lai
str. IPAV]
gi|24196638|gb|AAN50002.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. 56601]
gi|353458528|gb|AER03073.1| TPR-repeat-containing protein [Leptospira interrogans serovar Lai
str. IPAV]
Length = 284
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + A+ T E+ E K A E +Y +E ++L PND A V
Sbjct: 54 KASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLVPNDASAYYNRGLV 113
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + AI+ FE+ + +
Sbjct: 114 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIEDFEKAISLGENKNA 173
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + K +E + KA+ KK+ F+L AQ + K+S+++
Sbjct: 174 ELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYAQYGL--KKYSDSV 227
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 228 ESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 266
>gi|384109750|ref|ZP_10010615.1| Tetratricopeptide repeat-containing protein [Treponema sp. JC4]
gi|383868693|gb|EID84327.1| Tetratricopeptide repeat-containing protein [Treponema sp. JC4]
Length = 1005
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E L PN EA++ + IK QK VEA ++ + I++ PN+ E QV +
Sbjct: 197 EAALKTRPNWPEAIRHFSNLLIKCQKSVEAARIVKQSIKIHPNDPELLYTLGQVYLNQFD 256
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
+ A K F++ V L AY +K +E +K ++ + E +D+R
Sbjct: 257 YDNAKKTFKQANAVKANDVRILTALASAY----EKADESDKALDTILNAIDLEPLNNDVR 312
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKE-EPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
L + + ++ A E + + + +D + G Y + ++AE+ F+K
Sbjct: 313 ---LQYVDTLLSVNDYNSAFETIESMNDDSDGKDVKVMDLYGQYYITQGQDEKAEEYFDK 369
Query: 318 FRRLVPRNHPYREYFV 333
++ +H Y++Y +
Sbjct: 370 IKK---TDHHYKDYML 382
>gi|258405282|ref|YP_003198024.1| hypothetical protein Dret_1158 [Desulfohalobium retbaense DSM 5692]
gi|257797509|gb|ACV68446.1| TPR repeat-containing protein [Desulfohalobium retbaense DSM 5692]
Length = 315
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Query: 155 LMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
L +V + +KL A+ D ++ +P + + + V G+ + A++ F+ ++ DP
Sbjct: 68 LGDVLMAQEKLQLALLQYDDSLKKDPANIDAKYKRGLVLLQGGDDKEALQAFQAVVEMDP 127
Query: 215 LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKH 274
+AY GL Y ++EKR + + K + +L + + I + KH
Sbjct: 128 EYAKAYEGLGRVY-------VQMEKRDQARAQFLKALELDPELWRARAELGLIYHFQEKH 180
Query: 275 SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+A Y + ++ +P Y G Y +L+K D A + F K
Sbjct: 181 EQAAAQYTQAIELKPDKGSLYNNLGATYNMLKKYDLALQAFRK 223
>gi|455793222|gb|EMF44934.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Lora str. TE 1992]
Length = 281
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + A+ T E+ E K A E +Y +E ++L PND A V
Sbjct: 4 KASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLVPNDASAYYNRGLV 63
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + AI+ FE+ + +
Sbjct: 64 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIEDFEKAISLGENKNA 123
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + K +E + KA+ KK+ F+L AQ + K+S+++
Sbjct: 124 ELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYAQYGL--KKYSDSV 177
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 178 ESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 216
>gi|425064767|ref|ZP_18467887.1| Cytochrome c heme lyase subunitcmH [Pasteurella multocida subsp.
gallicida P1059]
gi|404384758|gb|EJZ81185.1| Cytochrome c heme lyase subunitcmH [Pasteurella multocida subsp.
gallicida P1059]
Length = 303
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL P+D ++ L ++ + + K A+D R +LEP+ E++L A++ ++ ++
Sbjct: 162 HLQKQPSDAKSWWLLGQIAMNTNKGQLALDSYARAHQLEPDNIEYKLSYARILMFSEDTS 221
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY-DGSDKKLNEV 237
KG +E++RKD +EA L Y + D K+ V
Sbjct: 222 DKAKGDTLLKEVIRKDHSNLEALGLLAFRYFETEDYKMAAV 262
>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1075
Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Query: 195 YAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
YAG + AI FE+ L DP A++GL + + +E EKA+E KE
Sbjct: 194 YAGNLKGAIAAFEKALEIDPKFHHAWNGLGAPLNDLGRN-SEAIAAFEKALEIDPKEHIA 252
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
+ L + + ++SEA+ +E+ ++ +P++ + GI L + EA
Sbjct: 253 -----WHGLGITLNAL-GRNSEAIAAFEKALEIDPKEHIAWHGLGITLNALGRNSEAIAA 306
Query: 315 FEKFRRLVPRNH 326
FEK + P+ H
Sbjct: 307 FEKALEIDPKAH 318
>gi|113475197|ref|YP_721258.1| hypothetical protein Tery_1499 [Trichodesmium erythraeum IMS101]
gi|110166245|gb|ABG50785.1| TPR repeat [Trichodesmium erythraeum IMS101]
Length = 486
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 91/219 (41%), Gaps = 35/219 (15%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+PN I Q L EV ++ EA++ ++ I + P E+ L A+V AG+ E AI
Sbjct: 141 DPNAILTYQYLGEVLACKKQYDEAIESFNQAIGINPYLSEYHLGLAKVLQNAGQIEKAIN 200
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDK------------KLN----EVEKRIEKAMERC 248
L +P EAY+ + + + K LN EV + A+ +
Sbjct: 201 SCHHALELNPNLAEAYYYIGLGFTKLQKWEEAIDSLLQAISLNFKNAEVYHHLGAALAQL 260
Query: 249 KKEKK-----KSDL----------RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFR 293
++ ++ K+ L +AQIK E EA++ Y E++ P
Sbjct: 261 QRWEEAVAAYKNGLEFNPNSAIIHHQLAYALAQIKQWE----EAVKEYREVLIINPNSAV 316
Query: 294 PYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYF 332
Y G T ++K +EA ++K ++ P N + ++
Sbjct: 317 VYDQLGEALTEIQKWEEAIDCYQKAVKIKPDNQKFNQHL 355
>gi|451947425|ref|YP_007468020.1| lipid A core-O-antigen ligase-like enyme [Desulfocapsa sulfexigens
DSM 10523]
gi|451906773|gb|AGF78367.1| lipid A core-O-antigen ligase-like enyme [Desulfocapsa sulfexigens
DSM 10523]
Length = 776
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 22/171 (12%)
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEI 209
+A Q + ++ +Q L E + ID+ I+L+P E + K + SY +++ A+ +
Sbjct: 501 KASQIYLNPQLSTQLLQEQLVTIDKAIQLDPLEGLYSSYKGNLLSYLEQNKEALDNYILA 560
Query: 210 LRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKV 269
RKDPL AY L EK+ + ++ + KK + ++A+ +
Sbjct: 561 SRKDPLE--------GAYLQRIALLLPPEKKEQASLLMAEGYKKGLNKEQLVFVLAEWYL 612
Query: 270 MESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
+ EAL V ++ ++ P + K+ A QF KFRR
Sbjct: 613 QQGDREEALTVLKQGTEQFPN--------------IAKRIPAFFQFYKFRR 649
>gi|383756227|ref|YP_005435212.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
gi|381376896|dbj|BAL93713.1| TPR repeat protein [Rubrivivax gelatinosus IL144]
Length = 927
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E E + Q L A+P++ A + + +A+ ++ L++ +P E LLKA+
Sbjct: 150 ERSEAALNQALTADPSNPSARLLMARLTAGKGDTRDALAQVEALLKDDPKRREAWLLKAE 209
Query: 192 VQSYA-GESEAAIKGFEEILRKDPLRVEAYHGLV 224
+ G+++A K FE+ L DP V+A+ GL
Sbjct: 210 LLWVGQGDADAGRKAFEQALVVDPRYVQAHSGLA 243
>gi|373110756|ref|ZP_09525019.1| hypothetical protein HMPREF9712_02612 [Myroides odoratimimus CCUG
10230]
gi|423130163|ref|ZP_17117838.1| hypothetical protein HMPREF9714_01238 [Myroides odoratimimus CCUG
12901]
gi|423133846|ref|ZP_17121493.1| hypothetical protein HMPREF9715_01268 [Myroides odoratimimus CIP
101113]
gi|371642110|gb|EHO07687.1| hypothetical protein HMPREF9712_02612 [Myroides odoratimimus CCUG
10230]
gi|371646202|gb|EHO11717.1| hypothetical protein HMPREF9714_01238 [Myroides odoratimimus CCUG
12901]
gi|371647900|gb|EHO13394.1| hypothetical protein HMPREF9715_01268 [Myroides odoratimimus CIP
101113]
Length = 424
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE EK I ANP+DI L T M++ +KS + + ++ + + PN+ + L
Sbjct: 248 EEAEKAIVAAREANPDDINLLLTHMDLYLKSNNMGKYEELAKQALAKNPND-DVLLYNLG 306
Query: 192 VQSY-AGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
V S+ AG E A K +EE +R +P AY L MA+
Sbjct: 307 VTSFDAGRFEDARKYYEEAIRINPKSENAY--LNMAF 341
>gi|307718665|ref|YP_003874197.1| hypothetical protein STHERM_c09780 [Spirochaeta thermophila DSM
6192]
gi|306532390|gb|ADN01924.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 654
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
++E E+E + L + N +EA L +V + EA+D +D + P+ E LK
Sbjct: 208 WDEAEREARRALTLDENAVEASYLLAQVATGKGRFQEALDHLDGFLGARPDSREGWYLKG 267
Query: 191 QVQSYAGESEAAIKGFEEILRKDP 214
+ E +++ F E+L + P
Sbjct: 268 VILDRLDRPEESLRAFREVLERYP 291
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 10/193 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE E+ L+ P ++EA + E+ + ++ A+ +R + + P + + A
Sbjct: 107 EEAERIYRDILSREPQNVEAGMGIAELSLARGQVASALREYERTLRMFPEHKKILTILAF 166
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
+ Y GE + A EE LR P E H L + ++ +E E+ +A+ +
Sbjct: 167 LYEYRGERDKAASYLEEALRLYPSDPEV-HLLAASSHLRKEEWDEAEREARRALTLDENA 225
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+ S L+AQ+ + + EAL + + P + +G+I L + D
Sbjct: 226 VEAS------YLLAQVATGKGRFQEALDHLDGFLGARPDSREGWYLKGVI---LDRLDRP 276
Query: 312 EKQFEKFRRLVPR 324
E+ FR ++ R
Sbjct: 277 EESLRAFREVLER 289
>gi|218245568|ref|YP_002370939.1| hypothetical protein PCC8801_0698 [Cyanothece sp. PCC 8801]
gi|218166046|gb|ACK64783.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8801]
Length = 784
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
PN I+ + L + + + EA+ +D++I ++PN+ L+ S G E A++
Sbjct: 273 PNYIQVWERLGFILFRIYQYEEAIFCLDKVINIKPNDDSSWHLRGLCLSSLGRLEEALES 332
Query: 206 FEEILRKDP-------------LRVEAYHGLVMAYDGS---DKKLNEVEKRIEKAMERCK 249
++ L +P ++E Y +++++ S D + +E+ K + K
Sbjct: 333 LDQALEVNPNDSFIWGNKGKLLNQLEEYQQALLSFNRSLELDPENDEIWYLKGKVLSELK 392
Query: 250 KEKKKSDLRDFKLLI-----------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQ 298
K ++ + D L I I V + +AL +++L++ P D++ +L +
Sbjct: 393 KYEEALNSFDKALEIHSNYYEAWGMRGVILVNLQYYKQALISFDKLIEINPNDYQGWLNR 452
Query: 299 GIIYTLLRKKDEAEKQFEK 317
GI L++ EA K K
Sbjct: 453 GIALIYLKRHQEALKSLNK 471
>gi|392961934|ref|ZP_10327381.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans DSM 17108]
gi|421056211|ref|ZP_15519138.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans B4]
gi|421058034|ref|ZP_15520773.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans B3]
gi|421065646|ref|ZP_15527366.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans A12]
gi|421072810|ref|ZP_15533914.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans A11]
gi|392438627|gb|EIW16450.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans B4]
gi|392445237|gb|EIW22569.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans A11]
gi|392452692|gb|EIW29597.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans DSM 17108]
gi|392458442|gb|EIW34976.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans A12]
gi|392461636|gb|EIW37808.1| Tetratricopeptide TPR_1 repeat-containing protein [Pelosinus
fermentans B3]
Length = 199
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 13/160 (8%)
Query: 174 RLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGS--- 230
+ IEL P++ + + + GE + AI + + + DPL +AY + YD
Sbjct: 37 KAIELNPHDPDAYTNRGVIYDIQGEYDLAIMDYTKAIELDPLDADAYTNRGVIYDSKGEY 96
Query: 231 DKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPR 290
D + + K IE + + + D K ++ A+ Y + ++ P+
Sbjct: 97 DLAMVDYTKAIELNPQGADSYANRGVIYDNK----------GEYELAIMDYTKAIELNPQ 146
Query: 291 DFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE 330
D Y + I +L + EA + F R P P RE
Sbjct: 147 DADTYFNKATICRMLGRNSEALDAYNLFIRYAPAADPNRE 186
>gi|88602067|ref|YP_502245.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88187529|gb|ABD40526.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 519
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE K ++ L + + A + + IK ++ EA+ RL+ L+P + +
Sbjct: 220 EEALKNVDHLLELDDRFVHAWELKSRILIKLERYSEALSSTKRLLWLKPKAYAGLWISCF 279
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
E A+ I PL ++ + +AY G +K + K +E+A++ +
Sbjct: 280 SLLKMNRYEEALNTSRLITTYYPLHSTGWNLMGLAYMGLNK-FQDALKPLERALQINPHD 338
Query: 252 KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
R +IA K+ ++ + L+ YE L +EEP + + + +G+ LL +
Sbjct: 339 SASQAYR----IIALRKL--KRYGDLLQYYEYLTEEEPDNLKAWFNRGV---LLHRAGRF 389
Query: 312 EKQFEKFRRLVPRN 325
+ E +++++ +N
Sbjct: 390 LEAIESYQKVLNKN 403
>gi|209522682|ref|ZP_03271240.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
gi|209496731|gb|EDZ97028.1| TPR repeat-containing protein [Arthrospira maxima CS-328]
Length = 1103
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 26/214 (12%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN--EFEWQLLKAQVQSYAG 197
Q L +P+ E L + +++ ++ EA+ + IE++P+ W L +V G
Sbjct: 357 QALEIHPDFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKPDLAAVHWNL--GRVYQQLG 414
Query: 198 ESEAAIKGFEEILRKDPLRVEA-YH---GLVMAYDGSDKKLNEVEKRI---EKAMERCKK 250
+EAAI ++ L P VEA +H G ++A G E E I ++A+ R
Sbjct: 415 NTEAAINSWKIALELKPDLVEADFHFELGNILARRG------EYEPAIASYQRAISR--- 465
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
K + + I ++V + + EAL ++ + P+ YL I+T LR+ +
Sbjct: 466 ---KPNWAEPYANIGCLRVQQDRLKEALDQLQKAIALSPKMPELYLHTARIFTKLRRHQD 522
Query: 311 AEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGE 344
A ++K L P N P + NM A I G+
Sbjct: 523 AINHYQKVIELQP-NFPDAYANLANMQA--ILGQ 553
>gi|148555287|ref|YP_001262869.1| hypothetical protein Swit_2372 [Sphingomonas wittichii RW1]
gi|148500477|gb|ABQ68731.1| Tetratricopeptide TPR_2 repeat protein [Sphingomonas wittichii RW1]
Length = 553
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 126 REDVSYEEKE-----KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP 180
R DV Y ++ EI++ LAA + E L V + S +L+EA + RL+EL+P
Sbjct: 53 RYDVYYARRDFTSARIEIKRALAAQDDIPEYWARLARVELASGRLLEAYEAYARLVELDP 112
Query: 181 NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP--LRVEAYHGLVMA 226
N+ E A++ G + A + +++L K P LR+ G V A
Sbjct: 113 NDAEAIQAMAELSYSGGSYDDAERLADQMLEKQPRSLRMLLVKGSVAA 160
>gi|134035047|sp|Q6ZXV5.2|TMTC3_HUMAN RecName: Full=Transmembrane and TPR repeat-containing protein 3;
AltName: Full=Protein SMILE
Length = 915
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 173 DRLIELEPNEFEWQLLKAQVQSYAGESEA---AIKGFEEILRKDPLRVEAYHGLVM-AYD 228
+R +EL P A V +GE + A K + ++PL Y L M A D
Sbjct: 622 NRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMD 681
Query: 229 GSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEE 288
DKK NE E ++KA+ K ++D R +A + +K +AL + EEL++
Sbjct: 682 --DKKDNEAEIWMKKAI------KLQADFRSALFNLALLYSQTAKELKALPILEELLRYY 733
Query: 289 PRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRRLVPRN 325
P + + +G I + +KKD A+K FE+ + P N
Sbjct: 734 PDHIKGLILKGDI-LMNQKKDILGAKKCFERILEMDPSN 771
>gi|145478081|ref|XP_001425063.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392131|emb|CAK57665.1| unnamed protein product [Paramecium tetraurelia]
Length = 1339
Score = 38.9 bits (89), Expect = 3.7, Method: Composition-based stats.
Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 27/221 (12%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
+YE+ + + P +A+ IK ++ EA++ +D+ +LE N++E LK
Sbjct: 635 NYEQALIQFTRSFDIQPTFKDAVFNEAAAYIKLKRYAEAINSLDKYNQLESNDYESFFLK 694
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAY---------HGL----VMAYDGSDKKLNE 236
+ + E A++ F + ++ P E GL V+ +D + K ++
Sbjct: 695 GCLLKSLMKYEEALECFSKAVQLKPNFFEGQFNKGVAQLESGLSKDAVITFDAAFKLKSD 754
Query: 237 VEKRI-------------EKAMERCKKEKKKSDLRDFKLLIAQIKVMESK-HSEALRVYE 282
EK + E+A++ +K K S L + +++ K EAL + +
Sbjct: 755 SEKSLNNKAVSLLNLSKPEEAIKELEKAIKLSPNNPTLLNNKAVTLIDLKRQDEALTILD 814
Query: 283 ELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
E++ +P F+ Y +G IY + +A++ F + + P
Sbjct: 815 EVINIDPNFFKAYNNKGTIYFNQKNLTQAQQYFSRAVEINP 855
>gi|417852876|ref|ZP_12498332.1| CcmH [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
gi|338215962|gb|EGP02168.1| CcmH [Pasteurella multocida subsp. gallicida str. Anand1_poultry]
Length = 269
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 141 HLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
HL P+D ++ L ++ + + K A+D R +LEP+ E++L A++ ++ ++
Sbjct: 128 HLQKQPSDAKSWWLLGQIAMNTNKGQLALDSYARAHQLEPDNIEYKLSYARILMFSEDTS 187
Query: 201 AAIKG---FEEILRKDPLRVEAYHGLVMAY 227
KG +E++RKD +EA L Y
Sbjct: 188 DKTKGDTLLKEVIRKDHSNLEALGLLAFRY 217
>gi|407847902|gb|EKG03465.1| intraflagellar transport protein IFT88, putative [Trypanosoma
cruzi]
Length = 784
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFE 207
+++ + L +K++ +A+ +R +++P E +WQL+ A G+ A + +E
Sbjct: 612 NMDVISWLGAYFVKNEIYDKAIQFFERASQIQPLEVKWQLMVASCHRRRGDYIQAKRLYE 671
Query: 208 EILRKDPLRVEAYHGLV-MAYD-GSDKKLNEVEKRIEKAMERCKKEKKKSDLRD 259
+ RK P +E LV + D G ++ NE K+I+K +R ++E + RD
Sbjct: 672 AVHRKYPENMECLRYLVHLCKDAGLIEEANEWFKKIKKLEQRQQEETDEGGYRD 725
>gi|407462901|ref|YP_006774218.1| hypothetical protein NKOR_07025 [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046523|gb|AFS81276.1| hypothetical protein NKOR_07025 [Candidatus Nitrosopumilus
koreensis AR1]
Length = 134
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+E K ++L PN+ +AL T+ + +K AV D+ +E+ + + LLKA
Sbjct: 36 YDEALKSGTEYLRMVPNNHDALFTVGGIYYLKKKYKTAVSYFDKALEIASYDVDVLLLKA 95
Query: 191 QVQSYAGESEAAIKGFEEILRKDP 214
GE++ AI+ E+I DP
Sbjct: 96 YSHQKLGENKRAIQCCEKIQEVDP 119
>gi|291567437|dbj|BAI89709.1| TPR domain protein [Arthrospira platensis NIES-39]
Length = 672
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFE-WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
+K KL EA+ + +E++P+ + +++L Q GE E A+ + + L P
Sbjct: 17 HLKEGKLEEAIACCNLALEMQPDWADTYKILGLAYQK-QGEFEPALIAYTKALEIKPDFG 75
Query: 218 EAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEA 277
E Y L Y ++ KL E + R DL +AQ+ +M K+ +A
Sbjct: 76 EVYGNLGSLY--AEHKLWEDAVQAYDVALRL-----NPDLVGLYRNLAQLLIMFGKYEDA 128
Query: 278 LRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+ ++ + ++P F+ Y G + L K AE +++ L P+
Sbjct: 129 ISYCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAEAAYQRGVELNPQ 175
>gi|449109744|ref|ZP_21746377.1| hypothetical protein HMPREF9722_02073 [Treponema denticola ATCC
33520]
gi|449125901|ref|ZP_21762203.1| hypothetical protein HMPREF9723_02247 [Treponema denticola OTK]
gi|448939870|gb|EMB20787.1| hypothetical protein HMPREF9723_02247 [Treponema denticola OTK]
gi|448958197|gb|EMB38930.1| hypothetical protein HMPREF9722_02073 [Treponema denticola ATCC
33520]
Length = 457
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE-KAMERCKKEKKK 254
+G+ AAIK + IL K+P EA + L AY +DKK++ IE K + +
Sbjct: 42 SGKYGAAIKDAKSILSKNPRDSEARYLLGKAY-LADKKVDLA--FIEFKTLNKTAVFNNP 98
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
+ +F+ +IA + + + EAL+ + L K +P++ +PY G IY D+A
Sbjct: 99 ATEIEFRTIIADLYLKFQQPDEALKEFMLLNKRDPKNPKPYFQAGQIYESKNMSDQAIAY 158
Query: 315 FEK 317
F+K
Sbjct: 159 FQK 161
>gi|428216783|ref|YP_007101248.1| sulfotransferase [Pseudanabaena sp. PCC 7367]
gi|427988565|gb|AFY68820.1| sulfotransferase [Pseudanabaena sp. PCC 7367]
Length = 830
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 92/229 (40%), Gaps = 36/229 (15%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN--EFEWQLL 188
Y+ EQ LA P EA L V L +A+D + I + PN + ++
Sbjct: 88 YDHALASYEQALAIRPKMAEAYLGLGNVHKLQGDLAKAIDNYQKAIAVNPNYEQAYTEMA 147
Query: 189 KAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKK----------LNEVE 238
Q+Q Y ++ AA+ + L+ +P AY L AY D+ + + E
Sbjct: 148 LVQIQQY--DAPAAVAASNQALQLNPNSAPAYRALAKAYLLQDRTEEAIAQYEQAIAQYE 205
Query: 239 KRIEKAMERCKKEKKKSDLRDFKLLIAQIKVM---------------------ESKHSEA 277
+ I K E + + S + KL + Q+K + + K +EA
Sbjct: 206 QAIAKDPELAEAHWELSVALNAKLSLHQLKAIQLNPTLIDYQSQLQLAKSLSKQGKTNEA 265
Query: 278 LRVYEELVKEEPRDFRPYLCQGIIYT-LLRKKDEAEKQFEKFRRLVPRN 325
+ E +++ +P ++ GI ++ +L ++ +A K L PRN
Sbjct: 266 ISCLENIIEIKPDCVPAHINLGITFSEILDRQTDAIAHLRKAIELSPRN 314
>gi|282895612|ref|ZP_06303746.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9]
gi|281199452|gb|EFA74316.1| hypothetical protein CRD_00245 [Raphidiopsis brookii D9]
Length = 461
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ 186
E +Y+E +++Q + +P EA ++ EA+ +++I L+PN +
Sbjct: 308 EQFNYKESLADLDQAIKIDPKYAEAYFKRGYALSWLRRYEEALLDFNQVIALDPNYLDGY 367
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
L + + +AA++ F ++R +P EAY MAY KL + + +E + +
Sbjct: 368 LNRGWTYIWLQNDQAALEDFNRVIRINPNYAEAYAHQGMAY----IKLGKYQAALESSKQ 423
Query: 247 RCKKEKKKS 255
+ + KS
Sbjct: 424 AIRLDPNKS 432
>gi|42526635|ref|NP_971733.1| TPR [Treponema denticola ATCC 35405]
gi|422342959|ref|ZP_16423898.1| TPR domain-containing protein [Treponema denticola F0402]
gi|449102959|ref|ZP_21739706.1| hypothetical protein HMPREF9730_00603 [Treponema denticola AL-2]
gi|449107027|ref|ZP_21743687.1| hypothetical protein HMPREF9729_01952 [Treponema denticola ASLM]
gi|449112255|ref|ZP_21748809.1| hypothetical protein HMPREF9735_01858 [Treponema denticola ATCC
33521]
gi|449115526|ref|ZP_21751990.1| hypothetical protein HMPREF9721_02508 [Treponema denticola ATCC
35404]
gi|449118094|ref|ZP_21754509.1| hypothetical protein HMPREF9726_02494 [Treponema denticola H-22]
gi|449120470|ref|ZP_21756855.1| hypothetical protein HMPREF9725_02320 [Treponema denticola H1-T]
gi|449122877|ref|ZP_21759208.1| hypothetical protein HMPREF9727_01968 [Treponema denticola MYR-T]
gi|449130883|ref|ZP_21767102.1| hypothetical protein HMPREF9724_01767 [Treponema denticola SP37]
gi|451968724|ref|ZP_21921953.1| hypothetical protein HMPREF9728_01132 [Treponema denticola US-Trep]
gi|41816828|gb|AAS11614.1| TPR domain protein [Treponema denticola ATCC 35405]
gi|325473176|gb|EGC76372.1| TPR domain-containing protein [Treponema denticola F0402]
gi|448941923|gb|EMB22823.1| hypothetical protein HMPREF9724_01767 [Treponema denticola SP37]
gi|448946973|gb|EMB27823.1| hypothetical protein HMPREF9727_01968 [Treponema denticola MYR-T]
gi|448947865|gb|EMB28708.1| hypothetical protein HMPREF9725_02320 [Treponema denticola H1-T]
gi|448949985|gb|EMB30809.1| hypothetical protein HMPREF9726_02494 [Treponema denticola H-22]
gi|448953303|gb|EMB34098.1| hypothetical protein HMPREF9721_02508 [Treponema denticola ATCC
35404]
gi|448955717|gb|EMB36481.1| hypothetical protein HMPREF9735_01858 [Treponema denticola ATCC
33521]
gi|448963652|gb|EMB44329.1| hypothetical protein HMPREF9729_01952 [Treponema denticola ASLM]
gi|448965761|gb|EMB46422.1| hypothetical protein HMPREF9730_00603 [Treponema denticola AL-2]
gi|451702737|gb|EMD57139.1| hypothetical protein HMPREF9728_01132 [Treponema denticola US-Trep]
Length = 457
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE-KAMERCKKEKKK 254
+G+ AAIK + IL K+P EA + L AY +DKK++ IE K + +
Sbjct: 42 SGKYGAAIKDAKSILSKNPRDSEARYLLGKAY-LADKKVDLA--FIEFKTLNKTAVFNNP 98
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
+ +F+ +IA + + + EAL+ + L K +P++ +PY G IY D+A
Sbjct: 99 ATEIEFRTIIADLYLKFQQPDEALKEFMLLNKRDPKNPKPYFQAGQIYESKNMSDQAIAY 158
Query: 315 FEK 317
F+K
Sbjct: 159 FQK 161
>gi|21229432|ref|NP_635354.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
gi|452211843|ref|YP_007491957.1| TPR repeat-containing protein [Methanosarcina mazei Tuc01]
gi|20908028|gb|AAM33026.1| O-linked N-acetylglucosamine transferase [Methanosarcina mazei Go1]
gi|452101745|gb|AGF98685.1| TPR repeat-containing protein [Methanosarcina mazei Tuc01]
Length = 350
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE KE ++ L +NP D + L+ + EA++ ++ +EL P + + LK
Sbjct: 212 YEEAVKEFDRCLESNPKDADILRNKGSALYMLGRYEEAIEAFNKSLELNPRDADAWNLKG 271
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAY 220
G E A++ ++ L+++P EA+
Sbjct: 272 STLYMIGRPEEALRALDKALQRNPNIFEAW 301
>gi|15669536|ref|NP_248347.1| O-linked GlnNAc transferase [Methanocaldococcus jannaschii DSM
2661]
gi|2842595|sp|Q58741.1|Y1345_METJA RecName: Full=TPR repeat-containing protein MJ1345
gi|1591987|gb|AAB99354.1| O-linked GlnNAc transferase [Methanocaldococcus jannaschii DSM
2661]
Length = 314
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E K +++ N DI AL ++++ I +L +A++ + ++L P++ L K
Sbjct: 197 YGEALKCLKKVFERNNKDIRALMYIIQILIYLGRLNQALEYTKKALKLNPDDPLLYLYKG 256
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
+ + G+ AIK F+++L +P +A++G +A + KL ++ + IE
Sbjct: 257 IILNKLGKYNEAIKYFDKVLEINPNIPDAWNGKAIALE----KLGKINEAIE 304
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 168 AVDVIDRLIELEP-NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLV 224
A+ +ID++++ P + W K ++ G+ + +++ F+ L+ +P ++ Y G +
Sbjct: 132 ALKIIDKILKKYPKSAIAWAE-KGEILYREGKLKKSLECFDNALKINPKDCQSLLYKGEI 190
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
+ G + E K ++K ER K D+R + I QI + + ++AL ++
Sbjct: 191 LFKLG---RYGEALKCLKKVFERNNK-----DIRAL-MYIIQILIYLGRLNQALEYTKKA 241
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+K P D YL +GII L K +EA K F+K + P
Sbjct: 242 LKLNPDDPLLYLYKGIILNKLGKYNEAIKYFDKVLEINP 280
>gi|406954142|gb|EKD83120.1| hypothetical protein ACD_39C00873G0002 [uncultured bacterium]
Length = 862
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 40/235 (17%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
++ E + E + ANP ++A L + +L E D++ RL + PN F
Sbjct: 548 NFAESQNAFESAIQANPQSLKAHYGLALCLEQQNRLDETQDILKRLDAMVPNVFNTNFEL 607
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPL-RVEAYHGLVMAYDGSDKKLNEVEKRIEKAM--- 245
A++ + A K + L+ D + +V G ++ +G K NE EK E+ +
Sbjct: 608 ARILFERRQVLEAHKYALKSLQWDHVPKVYELLGRILLMEG---KQNEAEKIFEEGLMLI 664
Query: 246 ---------------------------ERCKK--EKKKSDLR---DFKLLIAQIKVMESK 273
E+C+ E+ KS+LR D+ L + + K
Sbjct: 665 PPDHNERDAADRIRLNLAALMAGRGNFEKCQSYLEQIKSELRENIDYVYLQGMLLSRDQK 724
Query: 274 HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE-AEKQFEKFRRLVPRNHP 327
+++AL ++E+ +++ P++ R G I T L + E A E +++ RN P
Sbjct: 725 YTQALELFEKALEKAPQNSRLMNAVGYILTQLNQDLERATNLLEDAYQIIRRNEP 779
>gi|409992948|ref|ZP_11276111.1| hypothetical protein APPUASWS_17660 [Arthrospira platensis str.
Paraca]
gi|409936194|gb|EKN77695.1| hypothetical protein APPUASWS_17660 [Arthrospira platensis str.
Paraca]
Length = 672
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 74/167 (44%), Gaps = 9/167 (5%)
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFE-WQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
+K KL EA+ + +E++P+ + +++L Q GE E A+ + + L P
Sbjct: 17 HLKEGKLEEAIACCNLALEMQPDWADTYKILGLAYQK-QGEFEPALIAYTKALEIKPDFG 75
Query: 218 EAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEA 277
E Y L Y ++ KL E + R DL +AQ+ +M K+ +A
Sbjct: 76 EVYGNLGSLY--AEHKLWEDAVQAYDVALRL-----NPDLVGLYRNLAQLLIMFGKYEDA 128
Query: 278 LRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+ ++ + ++P F+ Y G + L K AE +++ L P+
Sbjct: 129 ISYCQQAIAKQPDSFKAYYLLGNALSNLEKWSAAEAAYQRGVELNPQ 175
>gi|413963735|ref|ZP_11402962.1| hypothetical protein BURK_027535 [Burkholderia sp. SJ98]
gi|413929567|gb|EKS68855.1| hypothetical protein BURK_027535 [Burkholderia sp. SJ98]
Length = 619
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 149 IEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEE 208
I +LQTL+ + V ++V+ L + + N E QL A+ Q A + A E+
Sbjct: 196 ILSLQTLL---ARGPNRVGGLNVLKDLTQNDQNRPEAQLALARQQLVADDPPGAKASLEK 252
Query: 209 ILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIK 268
L+ P + A L +A G +++ E EK +++ K D +L +AQ+
Sbjct: 253 ALQLKPDYLPA--ALTLARMGPEER-KEGIASFEKYVDKNPKS------HDARLALAQLY 303
Query: 269 VMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE---KQFEKFRRLVPRN 325
+ + +A + +E + K +P+D P + +I ++ D+A+ Q+ K P
Sbjct: 304 LSADRLDDAQKQFEIMRKNDPKDLTPLMALALINIQKKQFDKAQDFLNQYAKAAENTPGA 363
Query: 326 HPYREYF 332
P + Y
Sbjct: 364 DPGQAYI 370
>gi|440684109|ref|YP_007158904.1| serine/threonine protein kinase with TPR repeats [Anabaena
cylindrica PCC 7122]
gi|428681228|gb|AFZ59994.1| serine/threonine protein kinase with TPR repeats [Anabaena
cylindrica PCC 7122]
Length = 706
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 31/214 (14%)
Query: 143 AAN--PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESE 200
AAN PN +A + K QK E++ D+ I+L+PN E + V S+
Sbjct: 359 AANIKPNYFQAWYGQGKALFKLQKYQESLLAYDKAIQLQPNYLEAWTDRGFVLSHLQRYS 418
Query: 201 AAIKGFEEIL--RKD-----PLRVEAYHGLVMAYDGSDKKLNE-VEKRIEKAMERCKKEK 252
AI F++ L ++D + +A+ L YD + K N+ +E + + KK
Sbjct: 419 EAIFAFDKGLQIKEDYPALWDAKGDAFKNL-KQYDNAIKSYNQAIELQPDNYEIWYKKGF 477
Query: 253 KKSDLRDFK-LLIAQIKVME-------------------SKHSEALRVYEELVKEEPRDF 292
L+ + + A IK +E +++ +AL+ Y +LV+ +P +
Sbjct: 478 LLQSLKQYDDAITAYIKAVELKPDYEAALYNWGNSLVNLNRYEDALKAYSQLVQYKPNHY 537
Query: 293 RPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNH 326
+ + +G LR+ EA F++ + P N+
Sbjct: 538 QAWFSRGNSLITLRRYSEAIDSFKEVIKYNPSNY 571
>gi|51476348|emb|CAH18164.1| hypothetical protein [Homo sapiens]
Length = 915
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 173 DRLIELEPNEFEWQLLKAQVQSYAGESEA---AIKGFEEILRKDPLRVEAYHGLVM-AYD 228
+R +EL P A V +GE + A K + ++PL Y L M A D
Sbjct: 622 NRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMD 681
Query: 229 GSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEE 288
DKK NE E ++KA+ K ++D R +A + +K +AL + EEL++
Sbjct: 682 --DKKDNEAEIWMKKAI------KLQADFRSALFNLALLYSQTAKELKALPILEELLRYY 733
Query: 289 PRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRRLVPRN 325
P + + +G I + +KKD A+K FE+ + P N
Sbjct: 734 PDHIKGLILKGDI-LMNQKKDILGAKKCFERILEMDPSN 771
>gi|337288211|ref|YP_004627683.1| hypothetical protein TOPB45_0653 [Thermodesulfobacterium sp. OPB45]
gi|334901949|gb|AEH22755.1| Tetratricopeptide TPR_2 repeat-containing protein
[Thermodesulfobacterium geofontis OPF15]
Length = 202
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE K +E+ NP+ + A L K EA + R+++L+P FE +
Sbjct: 4 EEALKALEKEAMENPHSVFAQHKLAIAYFNLGKFQEAKEAFKRVLKLDPFHFEAMINLGI 63
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
+ + GE E A K F L+ P VEA++ L + + L+E EK KA+E
Sbjct: 64 LLAQEGELEEAKKAFTFTLKYYPNSVEAWNNLGLI-EFELGNLDEAEKCYRKALE 117
>gi|115522933|ref|YP_779844.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris BisA53]
gi|115516880|gb|ABJ04864.1| peptidase C14, caspase catalytic subunit p20 [Rhodopseudomonas
palustris BisA53]
Length = 491
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
KE+ + LA NPND AL +V A+ D I L P + E + V++
Sbjct: 333 KELSRKLADNPNDAAALYRRGQVYASKGAYPLALKDFDATIRLNPRDVEAYNNRCWVRTV 392
Query: 196 AGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKK 233
G+ + A++ E LR P V+A GL+ +G K
Sbjct: 393 TGDLQKALRDCNEALRLRPNFVDALDSRGLLNLMNGQSKN 432
>gi|124007593|ref|ZP_01692297.1| tetratricopeptide repeat family protein, putative [Microscilla
marina ATCC 23134]
gi|123986891|gb|EAY26656.1| tetratricopeptide repeat family protein, putative [Microscilla
marina ATCC 23134]
Length = 495
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 22/185 (11%)
Query: 158 VRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRV 217
+ ++ ++L EA +D+++ L E L K + + + A+ F + +R D
Sbjct: 250 IHLQMKQLDEAEKALDKVLRLNDRYVEAYLAKGNIHLFRKNYDLALIDFTKAIRLDSSNH 309
Query: 218 EAYHGLVMAYDGSDKKLNEVEKRI---EKAMERCKKEKKKSDLRDFKLLIAQIKVMESKH 274
A+ G +AY +KL + K + KA+ K+ ++ D L+ KH
Sbjct: 310 HAFSGSGVAY----QKLGKYTKALTEFNKAIALNKEAYLYAERGDIYRLLG-------KH 358
Query: 275 SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYFVD 334
EALR Y++ + +F P+ +G +TLL K E +K F+ + + P D
Sbjct: 359 EEALRDYDQSIALGNNNFTPF--EGKAFTLLSLK-EYDKALAMFKLTLTKKIP-----AD 410
Query: 335 NMVAT 339
N + T
Sbjct: 411 NKIYT 415
>gi|423063206|ref|ZP_17051996.1| TPR repeat-containing protein [Arthrospira platensis C1]
gi|406715328|gb|EKD10484.1| TPR repeat-containing protein [Arthrospira platensis C1]
Length = 1103
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN--EFEWQLLKAQVQSYAG 197
Q L +P+ E L + +++ ++ EA+ + IE++P+ W L +V G
Sbjct: 357 QALEIHPDFAEVHANLATMYLQNGQVNEAIAAYQKSIEIKPDLAAVHWNL--GRVYQQLG 414
Query: 198 ESEAAIKGFEEILRKDPLRVEA-YH---GLVMAYDGSDKKLNEVEKRIEKAMERCKKE-K 252
+EAAI ++ L P VEA +H G ++A G E A+ K+
Sbjct: 415 NTEAAINSWKIALELKPDLVEADFHFELGNILARRG----------EYEPAIASYKRAIS 464
Query: 253 KKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
+K + + I ++V + + EAL ++ + P+ YL I+T LR+ +A
Sbjct: 465 RKPNWAEPYANIGCLRVQQDRLKEALDQLQKAIALSPKMPELYLHTARIFTKLRRHQDAI 524
Query: 313 KQFEKFRRLVPRNHPYREYFVDNMVATKIFGE 344
++K L P N P + NM A I G+
Sbjct: 525 NHYQKVIELQP-NFPDAYANLANMQA--ILGQ 553
>gi|354569207|ref|ZP_08988363.1| serine/threonine protein kinase with TPR repeats [Fischerella sp.
JSC-11]
gi|353538862|gb|EHC08372.1| serine/threonine protein kinase with TPR repeats [Fischerella sp.
JSC-11]
Length = 673
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 13/205 (6%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE-WQLL 188
+Y+E + E+ L ++ N+ EAL + + EA+ +D+L ++ P++ WQ +
Sbjct: 408 NYQEALEIYEKALKSDNNNPEALSGKSLSLLALGQKQEALQYLDQLKQIRPDDPRIWQEI 467
Query: 189 KAQVQSYAGESEAAIKGFEEILRK--DPLRVEAYHGLVMAYDGSDK-KLNEVEKRIEKAM 245
++ G +AA + F+E L D LRV+ + + GS KLN R + A+
Sbjct: 468 GFAIEQSQGR-QAAKEYFQEALSSYDDILRVKKNNPIYWTDRGSILLKLN----RPQDAL 522
Query: 246 ERCKKEKKKSDLRDFKLLIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
+ ++ K D ++ LI + + K SEAL + + K P+D+ + Q I+ T
Sbjct: 523 D-SYEQALKLDNNFYEALIGKGNALNLLGKPSEALFAFRQASKVRPQDYLVWFNQAILLT 581
Query: 304 -LLRKKDEAEKQFEKFRRLVPRNHP 327
LR +EA K F++ L HP
Sbjct: 582 QTLRNHEEAIKAFDQTIALKDDFHP 606
>gi|428306906|ref|YP_007143731.1| hypothetical protein Cri9333_3393 [Crinalium epipsammum PCC 9333]
gi|428248441|gb|AFZ14221.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 1015
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 80/183 (43%), Gaps = 12/183 (6%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
+ NP +A L + IK+ K+ EA + + + PN F L V E
Sbjct: 355 IVINPEFHDAYNNLGNLLIKTDKIAEAEVIYRQAVAANPNHFGGYLNLGNVLMSLDRVEE 414
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL---- 257
AI+ +++ L +P + + L +A+ ++++ ++ + A R K +K +
Sbjct: 415 AIETYQKALSLNPCNPDIINNLAIAFAANNEQ-SQSDIHFAYAAYRQGKYQKAINYFQKF 473
Query: 258 -------RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
F L A+ + +++ ++++E+ + + P +F P+L ++ L +E
Sbjct: 474 FVQEPGELQFYLDFAECYLKTNQYELGIKIFEQAIIQYPNEFVPHLKLIVLRQWLNHIEE 533
Query: 311 AEK 313
A K
Sbjct: 534 AIK 536
>gi|86609622|ref|YP_478384.1| hypothetical protein CYB_2176 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558164|gb|ABD03121.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 895
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE E Q L A P D E + + K EA V R IEL P + +
Sbjct: 223 YEENEALFRQALLAYPEDAEIYSNFSALLQEIGKWPEAQAVALRAIELNPTYADAWVNYG 282
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL----VMAYD 228
+GE E A ++ L+ +P RVEA + L V YD
Sbjct: 283 SALLGSGERERAASAYQAALQFNPQRVEALYCLGRLAVANYD 324
>gi|167625756|ref|YP_001676050.1| hypothetical protein Shal_3851 [Shewanella halifaxensis HAW-EB4]
gi|167355778|gb|ABZ78391.1| TPR repeat-containing protein [Shewanella halifaxensis HAW-EB4]
Length = 430
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E LA NP +A + + KL +A ++++ L P E+E+ LL A+VQ AG+
Sbjct: 268 EAALAYNPALHQARRLAAALYYGQNKLAQAAKLLEQGQLLFPQEYEFSLLLARVQQAAGQ 327
Query: 199 SEAAIKGFEEILRKDPLRVEAYH 221
+E A+K I L ++ +H
Sbjct: 328 NEQALKSLAMIPDASELAIKKWH 350
>gi|456825351|gb|EMF73747.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 331
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + A+ T E+ E K A E +Y +E ++L PND A V
Sbjct: 54 KASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLVPNDASAYYNRGLV 113
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + AI+ FE+ + +
Sbjct: 114 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIEDFEKAISLGENKNA 173
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + K +E + KA+ KK+ F+L AQ + K+S+++
Sbjct: 174 ELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYAQYGL--KKYSDSV 227
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 228 ESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 266
>gi|418745393|ref|ZP_13301733.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
santarosai str. CBC379]
gi|418753707|ref|ZP_13309949.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
santarosai str. MOR084]
gi|409965978|gb|EKO33833.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
santarosai str. MOR084]
gi|410793855|gb|EKR91770.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
santarosai str. CBC379]
Length = 686
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 4/217 (1%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+ E Q A +PN+ + L L V K+ EA+ ++ + N+ E L A
Sbjct: 290 YKNAEYYFRQASALSPNEAKYLYNLSVVLQKNGNKEEALKYLELARDAGANDPEIYRLIA 349
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ S + E +I ++ L+ +P +++ L AY L+ E
Sbjct: 350 EGFSNLNQGEMSISALQKSLKYNPTDIDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGD 409
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
++ L + +++ Q++ ++SEA+ + +V P++ + Y G++Y
Sbjct: 410 SFTETALINLGVVLDQME----RYSEAITALDRVVDLNPKNAKAYHTLGLVYKHSGNGTL 465
Query: 311 AEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVD 347
A + + K + P N RE D ++ K F E V+
Sbjct: 466 AIENWRKSVAIEPENVQSREALGDYLLENKFFREAVE 502
>gi|406861070|gb|EKD14126.1| tetratricopeptide repeat domain-containing protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 350
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 10/133 (7%)
Query: 125 AREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE 184
A +DV + KE + LA NP ++ + + + +K+ EA+ +++ ++ P + E
Sbjct: 128 ATDDVELRKVLKEYDNILAQNPENMPISKRRIALLKSLEKIPEAITALNQFLDSSPTDAE 187
Query: 185 -WQLLKAQVQSYAGESEAAIKGFEEILRKDP--LRVEA------YHGLVMAYDGSDKKLN 235
W L A + G + AI EE+L P + A Y V GSDK L
Sbjct: 188 AWAEL-ADLYVAQGLYQQAIFALEEVLLVTPYAWNIHARLGEIQYMAAVAGETGSDKYLA 246
Query: 236 EVEKRIEKAMERC 248
E +R +++E C
Sbjct: 247 EAFRRFCRSIELC 259
>gi|397567523|gb|EJK45637.1| hypothetical protein THAOC_35736 [Thalassiosira oceanica]
Length = 536
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 95/233 (40%), Gaps = 31/233 (13%)
Query: 140 QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGES 199
Q + P + L V + + L +A+ + + +ELEP W++LK ++ G+
Sbjct: 80 QAIDMEPENARNWYQLYNVHKRMRSLNDALTDLTKAVELEPKP-AWRVLKGKLLMNLGQC 138
Query: 200 EAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS---- 255
+ A F + KD +A G+ K+ NE + AM +KE K+
Sbjct: 139 DQAALEF-SLANKDKQSADASSGV--------KEANECAGLLRSAMSSYQKEDWKATVTM 189
Query: 256 ---------DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
D D L AQ + + + +++K P+ Y +G Y L
Sbjct: 190 LERALAFTLDTPDLLFLKAQSEYHTEDYYGTVSDTGKILKNYPKHIEAYQLRGEAYVRLN 249
Query: 307 KKDEAEKQFEKFRRLVPRNHPYREYFVDNMV-----ATKIFGEKVDRESMASK 354
+ D A K F + +L P + ++ FV + AT+ F +K D E+ +K
Sbjct: 250 EMDAAVKHFREGLKLDPEHKGHK--FVKTITKKDKKATEAF-DKGDYETAINK 299
>gi|193215137|ref|YP_001996336.1| tetratricopeptide domain-containing protein [Chloroherpeton
thalassium ATCC 35110]
gi|193088614|gb|ACF13889.1| Tetratricopeptide TPR_2 repeat protein [Chloroherpeton thalassium
ATCC 35110]
Length = 640
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 106/254 (41%), Gaps = 44/254 (17%)
Query: 109 AATVESTNESTKDTTSAREDVSYEEKEKEIEQHL---AANPNDIEALQTLMEVRIKSQKL 165
A ++STN+ D + E EK EQ+L +PNDI AL L + +
Sbjct: 163 ATELDSTNKWYSDLL-GQLYFDTREFEKAAEQYLRITNKDPNDISALYMLANSYNAANQA 221
Query: 166 VEAVDVIDRLIELEPNEFEWQ----LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH 221
+A++V +++I++ E + LL Q++ Y ++AI ++++ DP +E Y
Sbjct: 222 QKAIEVYNKIIDIVGFEMDVLSQKFLLHVQLKQY----DSAIMTLQDMIIVDPENLELYR 277
Query: 222 GLVMAYDGSDKKLNEVEK-----RIE----KAMERCKKEKKK-SDLRDFKLLIAQIKVME 271
L Y S + + + IE KA+ + K D +F ++I ++ +
Sbjct: 278 TLGDMYIRSGRYQDAIRAYQDVLNIEPTDFKALVALGETYLKLQDFVNFSVIIKKVFSLH 337
Query: 272 SKHSE----------------------ALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
S E L V EE+ +E P +++ YL +G + +
Sbjct: 338 SFEVEDKLGVAEMYFRRIETDTNMVKPTLLVLEEIQRENPTEWKVYLLKGALALGQKNFS 397
Query: 310 EAEKQFEKFRRLVP 323
EA F+K L P
Sbjct: 398 EAISNFKKVTELQP 411
>gi|304314872|ref|YP_003850019.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
gi|302588331|gb|ADL58706.1| tetratricopeptide repeat domain-containing protein
[Methanothermobacter marburgensis str. Marburg]
Length = 406
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 98/193 (50%), Gaps = 17/193 (8%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVE-AVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
E+ + NP + A T + + + K+ E A+ D++++L P + + K V +
Sbjct: 175 FEKAIELNPKNYRAWGT-KGITLHNLKIYEEALKCYDKVLQLNPQDDKAWNNKGLVFNEL 233
Query: 197 GESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKK 254
G + +++ +E+ L+ +P EA++ G+V++ G R E+A+E C ++ +
Sbjct: 234 GRYDESLECYEKALQINPKLAEAWNNKGVVLSELG----------RYEEALE-CYEKALE 282
Query: 255 SDLRDFKLLIAQIKVME--SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
D D K + V+E K+ +AL +++ ++ P + +GII L++ +E+
Sbjct: 283 IDPEDDKTWNNKGLVLEELGKYEDALECFQKALEINPEFADAWKWKGIILEDLKEPEESL 342
Query: 313 KQFEKFRRLVPRN 325
K ++K +L P+N
Sbjct: 343 KCYKKALKLNPQN 355
>gi|300869518|ref|ZP_07114100.1| hypothetical protein OSCI_4110033 [Oscillatoria sp. PCC 6506]
gi|300332491|emb|CBN59298.1| hypothetical protein OSCI_4110033 [Oscillatoria sp. PCC 6506]
Length = 361
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 85/198 (42%), Gaps = 24/198 (12%)
Query: 66 RTLTPLSSPL----IKITSVTVAAAALLFMRLPFHSIKPAIAAPV------------AAA 109
RT P +SPL +K +T+A A L + +P ++ AP+ AA
Sbjct: 39 RTFCPQASPLRVYLLKPLLITIALLAPLTLPVPANADSKLAIAPLLPNRQLAGEFQQAAR 98
Query: 110 ATVE--STNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVE 167
+E N+ + + ++ K++ + + +P D A +R +
Sbjct: 99 KDIELLDVNDYRRQAVEKLSNEDFQGALKDLNEVIRLDPTDAYAYFLRGTIRYILKDYQG 158
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY--HGLVM 225
++ +++++L+PN + + S GE +AAI+ + ++++ DP Y GL+
Sbjct: 159 TIEDYNQVLKLDPNNILVYGFRGDLYSQLGEYQAAIEDYSQVIKLDPNNSSVYLNRGLIR 218
Query: 226 ----AYDGSDKKLNEVEK 239
Y G+ + N++ K
Sbjct: 219 DTIKDYQGAIEDYNQLLK 236
>gi|428319215|ref|YP_007117097.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
gi|428242895|gb|AFZ08681.1| glycosyl transferase group 1 [Oscillatoria nigro-viridis PCC 7112]
Length = 3281
Score = 38.5 bits (88), Expect = 4.7, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 82/196 (41%), Gaps = 13/196 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E E Q + P L L + K+ EA+D ++ I + E L KA +
Sbjct: 34 EAENLYRQIIEVQPESANVLCLLGIAARQQGKIAEAIDFYEKAIAQNRDFVEAHLNKANL 93
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRI---EKAMERCK 249
GE + AI +EE+++ P V AY+ L A ++L E++ I + A++
Sbjct: 94 LLDVGEYQRAIASYEEVIKIQPNSVLAYNNLGWA----KQQLGEIDAAILYYQTALQL-- 147
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
S+L + + + +++ +EA+ Y +K P + G + K
Sbjct: 148 ----DSNLHETAHNLGHLYKQKNQLNEAIAYYLHALKVNPNLTYSLMGLGTVLQQQGKFA 203
Query: 310 EAEKQFEKFRRLVPRN 325
EA +++ +L P N
Sbjct: 204 EAFNCYQQAVKLDPNN 219
Score = 38.5 bits (88), Expect = 5.0, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 17/232 (7%)
Query: 101 AIAAPVAAAATVESTNESTKDTTSA-REDVSYEEKEKEIEQHLAANPNDIEALQTLMEVR 159
AIA A A + E+ + SA E EE E E+ L+ NPN EAL L +R
Sbjct: 1258 AIAHYRQALAIDRNLAETASNLGSALAEAGETEEAIAEYERALSLNPNCPEALINLGLLR 1317
Query: 160 IKSQKLVEAVDVIDRLIELEPNEFEWQL-----LKAQVQSYAGES--EAAIKGFEEILRK 212
+ + EA+ ++ I++ PN L L+ Q + A + E AI +E +
Sbjct: 1318 EEQGDVAEAISCYEQAIQVNPNCAAAYLNLGIALEEQGEEAAAGANYERAIANYERAIAI 1377
Query: 213 DPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE-KKKSDLRDFKLLIAQIKVME 271
+P ++A H L A + + R+ A+ + + DL + L + +
Sbjct: 1378 EPNYLDALHNLAYA--------SIRQGRVADAIAYYDRALALQPDLAETDLALGSWLSNQ 1429
Query: 272 SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
K EAL ++ +++ P + + GI+ K ++A +++ L P
Sbjct: 1430 DKLDEALAFCQQAIQKLPASAQAHCNLGIVLQKQGKIEDAIGCYQQALSLKP 1481
>gi|224369129|ref|YP_002603293.1| hypothetical protein HRM2_20280 [Desulfobacterium autotrophicum
HRM2]
gi|223691846|gb|ACN15129.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
autotrophicum HRM2]
Length = 761
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 91/222 (40%), Gaps = 42/222 (18%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
++E H +P++ +AL L I + L +A + I+ +++L+P+ + LKAQ+ +
Sbjct: 87 KVETH---DPDNKDALVKLASFFILGKDLEKAKEKIEHVLKLDPDNTDALFLKAQILTQE 143
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGL-----------------VMAYDG---------- 229
+ + A E I+ K P + A L V A D
Sbjct: 144 KDVDTASTLLERIIDKKPDHINALQALARIKMFKQEFEQAEALLVKAVDVDTAAIQPRLA 203
Query: 230 ------SDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEE 283
+ K+ + E ++ A+E K S+ D ++++ + + A Y +
Sbjct: 204 LVTFLIAKKRFKDAEAQLLAAVE------KNSENSDVRIILGNFYFRKRNNPSAEAAYLK 257
Query: 284 LVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
V+ P+ +PY+ Y + +D+A ++K + P N
Sbjct: 258 AVELAPKAMKPYMTAAGFYDITNSRDKALDMYQKALAIQPDN 299
>gi|337286267|ref|YP_004625740.1| hypothetical protein Thein_0899 [Thermodesulfatator indicus DSM
15286]
gi|335359095|gb|AEH44776.1| Tetratricopeptide TPR_1 repeat-containing protein
[Thermodesulfatator indicus DSM 15286]
Length = 561
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E+ L +PN+ EAL L + ++ KL +A+ V++RL + P L A+V G
Sbjct: 126 LEKLLEKDPNNAEALSILTSIYLEQNKLEKAIKVLERLAKKNPENPVIYLELARVYRKKG 185
Query: 198 ESEAAIKGFEEILRKDP--LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS 255
+ + A K + + L+ +P L++ +G + G+ K E +K E+A+ + ++
Sbjct: 186 DFDQARKYYSKALKLEPDNLKILLEYGDFLEKIGAFK---EAQKIYEEALAQNPEQ---- 238
Query: 256 DLRDFKLLIAQIKVMES-----KHSEALRVYEELVKEEPR-DFRPYLCQGIIYTLLRKKD 309
F L A +K+ + K E + EELV E P+ FR + ++ L ++
Sbjct: 239 ----FHLYEALLKLYVNSNEFEKALELINKLEELVGERPQLLFR----KALLLMDLNREK 290
Query: 310 EAEKQFEK 317
EAEK EK
Sbjct: 291 EAEKALEK 298
>gi|418730129|ref|ZP_13288646.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans str. UI 12758]
gi|421124774|ref|ZP_15585031.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421134791|ref|ZP_15594922.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410021017|gb|EKO87811.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410437905|gb|EKP87004.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|410775143|gb|EKR55142.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans str. UI 12758]
Length = 688
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 4/217 (1%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+ E Q +PN+ + L L V K+ EA+ ++ + N+ E L A
Sbjct: 292 YKNAEYHFRQASNLSPNEAKYLYNLAIVLQKNGNKEEALKYLELARDAGANDPEIYRLIA 351
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ S + E +I ++ L+ +P+ V++ L AY L+ E
Sbjct: 352 EGFSNLNQGEMSISALQKSLKYNPMDVDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGD 411
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
++ L + +++ Q++ ++ EA+ +++ P++ + Y GI+Y
Sbjct: 412 SFTETALINLGVVLDQME----RYGEAVTTLNRVIELNPKNAKAYHTLGIVYKHSGNGTL 467
Query: 311 AEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVD 347
A + + K + P N RE D ++ K F E V+
Sbjct: 468 AIENWRKSTAIEPENIQSREALGDYLLENKFFREAVE 504
>gi|410721444|ref|ZP_11360779.1| tetratricopeptide repeat protein [Methanobacterium sp. Maddingley
MBC34]
gi|410598901|gb|EKQ53464.1| tetratricopeptide repeat protein [Methanobacterium sp. Maddingley
MBC34]
Length = 296
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 63/171 (36%), Gaps = 45/171 (26%)
Query: 156 MEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPL 215
+E + + EA+D+ R +E EP+ + LL+ V G+ A+K + + L +P
Sbjct: 14 IETWLDHKNYFEAIDLFSRALEFEPHNPDAHLLRGAVYVDVGDLHLALKDYNKALEYNPE 73
Query: 216 RVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK 273
+ + G V+ Y G +
Sbjct: 74 NIGLFFDKGTVLFYLG-------------------------------------------E 90
Query: 274 HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
+++A+ YE+ + EEP D G+ Y L + A+K + L+ +
Sbjct: 91 YNKAIHSYEKFLSEEPHDVDALYFNGLAYHFLGQNKNAQKLIDDALSLIEK 141
>gi|222054003|ref|YP_002536365.1| hypothetical protein Geob_0902 [Geobacter daltonii FRC-32]
gi|221563292|gb|ACM19264.1| Tetratricopeptide TPR_2 repeat protein [Geobacter daltonii FRC-32]
Length = 627
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 137 EIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYA 196
E Q+L+ ++++A + L ++ + +A++ L++L+ ++ L A+V +
Sbjct: 360 EYRQYLSTAADNLDARRRLADIYTQRGSYPQAIEQYHALLKLKNDDAATHLKLARVYVSS 419
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSD 256
+ AI + + +P +EA+ L Y +K N+ E E A E K K D
Sbjct: 420 KDYTTAISEYLATTKLEPDNIEAHRELAQLY----RKKNQNE---EAAKEYQAVLKVKKD 472
Query: 257 LRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
D + + I V K+ E + + +E V++ P+D + G++Y KKD
Sbjct: 473 DNDARTALTSIYVKNKKYDELIGLLKEGVEQNPKDPNSHYKLGLMYEF--KKD 523
>gi|357406150|ref|YP_004918074.1| hypothetical protein MEALZ_2823 [Methylomicrobium alcaliphilum 20Z]
gi|351718815|emb|CCE24489.1| exported protein of unknown function [Methylomicrobium alcaliphilum
20Z]
Length = 564
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 153 QTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRK 212
Q ++E+ IK +KL EA ++ L++ PNE E+ L+A +++ + +AA+ F+E L
Sbjct: 75 QLVLEL-IKQKKLDEAQTKLNDLLKQFPNEAEYHNLQALIKTLQKDKKAAVTSFQEALNL 133
Query: 213 DPLRVEAYHG 222
+P + A G
Sbjct: 134 NPHNLNALQG 143
>gi|428305223|ref|YP_007142048.1| hypothetical protein Cri9333_1649 [Crinalium epipsammum PCC 9333]
gi|428246758|gb|AFZ12538.1| Tetratricopeptide TPR_1 repeat-containing protein [Crinalium
epipsammum PCC 9333]
Length = 832
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 130 SYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLK 189
Y+E +Q L PND E V + + EA+ D+ ++++P+++E K
Sbjct: 611 CYQEALVAFDQALKVKPNDHEPWSNKGIVLVNLGRYQEALIAFDQTLKVKPDQYEVWNNK 670
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMER 247
V G + AI F++ L+ P + E ++ G+ + KL ++ + +
Sbjct: 671 GIVLVNLGRYQEAITAFDQTLKVKPDQYEVWNNKGIALG------KLGRYQEALAAFDQT 724
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
K + + ++ + K IA + + ++ EA+ +++ +K +P D + + + Y L
Sbjct: 725 LKVKPDQYEVWNNK-GIALVNL--GRYQEAITAFDQTLKVKPDDDKIFYNKACCYALQGN 781
Query: 308 KDEAEKQFEKFRRLVPRNHPYRE 330
++A ++ L P+ YR+
Sbjct: 782 VEQAINNLQQAINLDPK---YRD 801
>gi|417770044|ref|ZP_12417955.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Pomona str. Pomona]
gi|417785099|ref|ZP_12432804.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans str. C10069]
gi|418681647|ref|ZP_13242871.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418709279|ref|ZP_13270070.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|421115934|ref|ZP_15576328.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|400326620|gb|EJO78885.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|409947933|gb|EKN97926.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Pomona str. Pomona]
gi|409951888|gb|EKO06402.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans str. C10069]
gi|410012515|gb|EKO70612.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410770225|gb|EKR45447.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|455665696|gb|EMF31204.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Pomona str. Fox 32256]
gi|456970322|gb|EMG11144.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 688
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 4/217 (1%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y+ E Q +PN+ + L L V K+ EA+ ++ + N+ E L A
Sbjct: 292 YKNAEYHFRQASNLSPNEAKYLYNLAIVLQKNGNKEEALKYLELARDAGANDPEIYRLIA 351
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
+ S + E +I ++ L+ +P+ V++ L AY L+ E
Sbjct: 352 EGFSNLNQGEMSISALQKSLKYNPMDVDSLFQLAEAYYNKGDLLSAEETYRRIVSSTPGD 411
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDE 310
++ L + +++ Q++ ++ EA+ +++ P++ + Y GI+Y
Sbjct: 412 SFTETALINLGVVLDQME----RYGEAVTTLNRVIELNPKNAKAYHTLGIVYKHSGNGTL 467
Query: 311 AEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKVD 347
A + + K + P N RE D ++ K F E V+
Sbjct: 468 AIENWRKSTAIEPENIQSREALGDYLLENKFFREAVE 504
>gi|381204936|ref|ZP_09912007.1| TPR domain-containing protein [SAR324 cluster bacterium JCVI-SC
AAA005]
Length = 632
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YE+ +++ L + N +EA + ++IK Q A++ ++ L+ LEP+ + QLL+
Sbjct: 141 YEKAVVSLDEALQRDGNYVEAYFHMARIQIKRQNYESALEAVENLLVLEPSNKDVQLLRL 200
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
++ G A E+L +DP VE +L ++++ + A+ R K+
Sbjct: 201 RIFVAQGNYYPASVLATELLAQDPQWVEVLR--------EQLRLFYLQQKPDDALSRIKE 252
Query: 251 EKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEP 289
+ L + +L+ A + + + + A +V E+L++ +P
Sbjct: 253 LARMGKLEPEDQLIYALLLNKQGRQATANQVLEDLLRRDP 292
>gi|365886216|ref|ZP_09425168.1| putative Peptidase, Caspase-like domain and TPR repeats
[Bradyrhizobium sp. STM 3809]
gi|365338296|emb|CCD97699.1| putative Peptidase, Caspase-like domain and TPR repeats
[Bradyrhizobium sp. STM 3809]
Length = 534
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K + +AANP+D AL +V +A+ D I + P + E + ++
Sbjct: 376 KGLTAKIAANPDDAAALYRRGQVYASKGAYPQAIRDFDESIRINPKDVEALNNRCWARTV 435
Query: 196 AGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKK 233
GE +AA++ E LR P V+A GLV G+ K
Sbjct: 436 VGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGATKN 475
>gi|408419692|ref|YP_006761106.1| hypothetical protein TOL2_C22410 [Desulfobacula toluolica Tol2]
gi|405106905|emb|CCK80402.1| tetratricopeptide domain protein [Desulfobacula toluolica Tol2]
Length = 760
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
++L ++I V + K ++ALR+ EL EEP+ RP +G+ + K D+A+ K +
Sbjct: 336 RMLKSEILVYKKKFTDALRLLNELENEEPKAPRPLYFKGVCFIATGKYDQAKSSVAKAIK 395
Query: 321 LVPRNHPYREYFVDNMVATKIF 342
L P YF M+ I+
Sbjct: 396 LNPN------YFKARMLLADIY 411
>gi|410940814|ref|ZP_11372615.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
noguchii str. 2006001870]
gi|410784140|gb|EKR73130.1| anaphase-promoting complex, cyclosome, subunit 3 [Leptospira
noguchii str. 2006001870]
Length = 688
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNE-------FEWQLLKA 190
+++ L NP D++AL L EV L+ A + R++ P + ++
Sbjct: 367 LQKSLKYNPTDVDALFQLAEVYYNKGDLLSAEETYRRIVSSTPGDSFTETALINLGVVLD 426
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEK-RIEKAMERCK 249
Q++ Y GE A+ ++ +P +AYH L + Y S +E R A+E
Sbjct: 427 QMERY-GE---AVATLNRVIELNPKNAKAYHTLGIVYKHSGNGTLAIENWRKSTAIEPEN 482
Query: 250 KEKKKSDLRDFKLLIAQIKVMESKH-SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+ +++ L D+ ++E+K EA+ Y LVK + ++ YL Y ++
Sbjct: 483 IQSREA-LGDY--------LLENKFFREAVEEYTGLVKHKDDAYKVYLKMAEAYMGMQDD 533
Query: 309 DEAEK 313
AEK
Sbjct: 534 SNAEK 538
>gi|317969206|ref|ZP_07970596.1| hypothetical protein SCB02_06707 [Synechococcus sp. CB0205]
Length = 278
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 153 QTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRK 212
Q L+++ I+ + EA V++RL + +P ++ +LL A+++ + A + +IL
Sbjct: 71 QRLIDLLIQQGQSQEASLVLERLADQQPQNWQLRLLLAELRRTNNDRSGAERELRQILNL 130
Query: 213 DPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES 272
P R+EA L+ + E E +++ +E K + LL+ ++ +
Sbjct: 131 KPDRIEALQ-LLTLIQLEQGRGAEAEAQLKTLLEASSKPTPQPQKLGLGLLLGDLRQRQG 189
Query: 273 KHSEALRVYEELVKEEPRDFRPYLC 297
K ++AL +Y +L K+ PRD RP L
Sbjct: 190 KSADALALYGQLAKDFPRDPRPLLA 214
>gi|451948937|ref|YP_007469532.1| tetratricopeptide repeat protein [Desulfocapsa sulfexigens DSM
10523]
gi|451908285|gb|AGF79879.1| tetratricopeptide repeat protein [Desulfocapsa sulfexigens DSM
10523]
Length = 581
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
R EK + +D +LL+A++ + ++ EA+ +Y EL+ P D YL G +Y+
Sbjct: 115 RTAIEKYPDETQD-RLLLARLDIQNNEIDEAINLYNELISLSPEDETLYLRLGFLYSEQH 173
Query: 307 KKDEAEKQFEK 317
+ EAEK ++K
Sbjct: 174 RYMEAEKTYQK 184
>gi|88602246|ref|YP_502424.1| tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
gi|88187708|gb|ABD40705.1| Tetratricopeptide TPR_2 [Methanospirillum hungatei JF-1]
Length = 635
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 160 IKSQKLVEAVDVIDRLIELEPN-EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
+++ + +A I++ + ++P W L K + E E AI F+++L KDP ++
Sbjct: 195 VQAGEFEKAYPFIEKSLTIQPELTLSW-LYKGFIHHNRKEYEEAITCFDKVLAKDPFQIR 253
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMES--KHSE 276
A+ L Y S L++ +K +E C K D + + +I + +++ ++ E
Sbjct: 254 AW--LFKGY--SLFHLHQDDKALE-----CFDRVIKEDRKQLRAIIYKGYCLKNLKRYKE 304
Query: 277 ALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRN 325
A ++ ++ PRD L +GI ++ EA F+K L RN
Sbjct: 305 AGNAFDNAIQLSPRDLNLRLNRGICLFEDKQFYEALNAFDKVLELDKRN 353
>gi|451848295|gb|EMD61601.1| hypothetical protein COCSADRAFT_173919 [Cochliobolus sativus
ND90Pr]
Length = 1326
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 16/173 (9%)
Query: 167 EAVDVIDRLIELEPNEF----EWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHG 222
EA+ + LEP + LL+ QV+ Y G E+ K ++++ P + +
Sbjct: 95 EAIKSYKMALRLEPGSLNILRDLALLQCQVRDYEGYIESRRK----MMQERPQLRQNWTA 150
Query: 223 LVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK-LLIAQIKVMESKHSE-ALRV 280
L +AY S E E ++ E K+ KSDL + L + + ES E AL+
Sbjct: 151 LAVAYHLSGN-FAEAENILKTYEETLKQPPPKSDLEHSEATLYKNMIIYESGDVERALKH 209
Query: 281 YEELVKEEPRDFRPYLCQGIIYTL-LRKKDEAEKQFEKFRRLVPRNHPYREYF 332
+E+V+ D R L Y L L +K+EAEK +R L+ RN+ YR YF
Sbjct: 210 IDEVVRVS-LDRRAALELRAKYLLELGRKEEAEK---AYRVLLTRNNEYRGYF 258
>gi|327401541|ref|YP_004342380.1| hypothetical protein Arcve_1665 [Archaeoglobus veneficus SNP6]
gi|327317049|gb|AEA47665.1| Tetratricopeptide TPR_1 repeat-containing protein [Archaeoglobus
veneficus SNP6]
Length = 222
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 135 EKEIE---QHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
E+E+E + L P +I L L + ++ EA+ IDR +EL P+ + +
Sbjct: 19 EEEVEFFSKCLEMEPENIYVLNNLGIALYELGRIDEAISYIDRALELNPDYADAWYNRGI 78
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAY 227
V S AG+ + AI FE+ + +P A++ + +AY
Sbjct: 79 VLSDAGKYDEAIACFEKAIALNPDDAAAWNNMGLAY 114
>gi|449128256|ref|ZP_21764503.1| hypothetical protein HMPREF9733_01906 [Treponema denticola SP33]
gi|448941589|gb|EMB22490.1| hypothetical protein HMPREF9733_01906 [Treponema denticola SP33]
Length = 457
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
Query: 196 AGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE-KAMERCKKEKKK 254
+G+ AAIK + IL K+P EA + L AY +DKK + IE K + +
Sbjct: 42 SGKYGAAIKDAKSILSKNPRDSEARYLLGKAY-LADKKTDLA--FIEFKTLNKTAVFNNP 98
Query: 255 SDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQ 314
+ +F+ +IA + + + EAL+ + L K++P++ +PY G IY K ++A
Sbjct: 99 ATEIEFRTIIADLYLKFQQPDEALKEFMLLNKKDPKNPKPYFQAGQIYENKNKSEQAIAY 158
Query: 315 FEK 317
F+K
Sbjct: 159 FQK 161
>gi|338534525|ref|YP_004667859.1| hypothetical protein LILAB_24430 [Myxococcus fulvus HW-1]
gi|337260621|gb|AEI66781.1| TPR repeat-containing protein [Myxococcus fulvus HW-1]
Length = 459
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 79/196 (40%), Gaps = 17/196 (8%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P+ E L R++S++ EA+ + R L P+ W+L A+ G++ A++
Sbjct: 136 SPDTAEFHYRLGLARLESEQYTEALGPLRRATTLAPDRTAWRLPLAKALHRTGDAPGAVE 195
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLN---EVEKRIEKAMERCKK----------- 250
++R P E + +D E ++E+ +
Sbjct: 196 ALGAVVRGQPTPAEVTTARALMEQIADPFSGFPKAAEAKLEEGLRYLNDLDAPQHAILAF 255
Query: 251 EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL---VKEEPRDFRPYLCQGIIYTLLRK 307
E+ D D ++ A + + + +A R +E ++ PRD + +L G +Y ++
Sbjct: 256 EEILLDYPDVAVVHALLGLAYQRLDDAGRAVDEFKQAIERAPRDGKNHLYLGELYLSRQR 315
Query: 308 KDEAEKQFEKFRRLVP 323
D A FEK L P
Sbjct: 316 PDAARTSFEKAVSLHP 331
>gi|196231815|ref|ZP_03130671.1| hypothetical protein CfE428DRAFT_3836 [Chthoniobacter flavus
Ellin428]
gi|196223937|gb|EDY18451.1| hypothetical protein CfE428DRAFT_3836 [Chthoniobacter flavus
Ellin428]
Length = 1575
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E E+++ LAANP +E + L + +AV R +EL PN+ QL
Sbjct: 1009 EYTDELKRQLAANPQSLETVLRLADAF--ENDAAQAVTYARRAVELRPNDLSLQLRLGGA 1066
Query: 193 QSYAGESEAAIKGFEEILRKDPLRV--EAYHGLVMAYD--GSDKKLNEVEKRIEKAMERC 248
+ + A++ +E + KDP + E ++G + + G + + + +
Sbjct: 1067 LAANRQPADAVRVWEAVFAKDPQAIFSEGFNGYLATFKAAGQLDQFSTILLKTPPGNLLA 1126
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDF-----RPYLCQGIIYT 303
D + +A+ + K +EA+++++ + R L Q +I
Sbjct: 1127 ALAFFSRDTTFYYQQVAEAMNQDGKPAEAIQLWQAALARARRGTTSSFQETNLLQSLIPA 1186
Query: 304 LLR--KKDEAEKQFEKF 318
LL+ +KDEA ++FE +
Sbjct: 1187 LLKAGRKDEAIQEFESY 1203
>gi|418700611|ref|ZP_13261553.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410760512|gb|EKR26708.1| tetratricopeptide repeat protein [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 234
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 6/219 (2%)
Query: 99 KPAIAAPVAAAATVESTNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEV 158
K + + A+ T E+ E K A E +Y +E ++L PND A V
Sbjct: 4 KASHSNAAASVTTAENPQEIFKRAYRANEKKAYLNAVEEYSKYLKLVPNDASAYYNRGLV 63
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
++ +AV ++ +E++P++ L K + + AI+ FE+ + +
Sbjct: 64 HYTLKRYNDAVRDFEKAVEIDPSKTYAFLYKGYAYEMISDCKQAIEDFEKAISLGENKNA 123
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
+G + K +E + KA+ KK+ F+L AQ + K+S+++
Sbjct: 124 ELYGHKARCENRSKNYDEGFQDALKALNI----DKKNAYAFFELAYAQYGL--KKYSDSV 177
Query: 279 RVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
Y ++++ P D + +G+ L K A K F++
Sbjct: 178 ESYTKVLQFSPNDGVAFHNRGLALVFLNKIPSACKDFQR 216
>gi|330509099|ref|YP_004385527.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929907|gb|AEB69709.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 492
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 162 SQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAY- 220
+++ EA++ +D+ +EL P W KA G ++ A+ F+E LR+ P ++
Sbjct: 250 AERWEEALEAVDKSLELNPKSSVWWHFKASTLMEIGRNDEALAAFDEALRQSPGDAHSWL 309
Query: 221 --HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEAL 278
GL++ ++ + ++ +E E KE L L + E+K EA
Sbjct: 310 RKAGLLVEMKCYNESIKAYDRTLELIAESNTKELAGIWLVKGTALNRIGRRKEAK--EAF 367
Query: 279 RVYEEL----VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPY 328
R+ EL + E+P D +G+ L + +E+ + +++ PR PY
Sbjct: 368 RMSLELHVKAILEDPGDLSLKRMKGLTLYNLGRYEESLEVYDQVLEASPRIEPY 421
>gi|381186319|ref|ZP_09893891.1| secreted TPR-repeat containing protein [Flavobacterium frigoris
PS1]
gi|379651754|gb|EIA10317.1| secreted TPR-repeat containing protein [Flavobacterium frigoris
PS1]
Length = 217
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 127 EDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQ 186
+D YE+ + E L +NP++++ ++ L ++ ++ E++ +LIEL+P+E ++
Sbjct: 15 DDGKYEQSKPIFESLLKSNPSNLKIIENLGDIAGNNKSWEESISYYKKLIELKPSEADY- 73
Query: 187 LLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAME 246
Y G KG L V + L M ++E+++ EKA+E
Sbjct: 74 -----FYKYGG-----AKGMH------ALEVNKFRALGM--------IDEIKEAFEKAIE 109
Query: 247 RCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLR 306
S +L + ++ ++A+R EL+K D YL +G I +
Sbjct: 110 -LDSGHIDSRWALIELYLKLPGIVGGSETKAIRYSNELLKLSAVD--GYLSRGHIEEYFK 166
Query: 307 KKDEAEKQFEK 317
+ AE+Q++K
Sbjct: 167 RYATAEQQYKK 177
>gi|376260962|ref|YP_005147682.1| Tfp pilus assembly protein PilF [Clostridium sp. BNL1100]
gi|373944956|gb|AEY65877.1| Tfp pilus assembly protein PilF [Clostridium sp. BNL1100]
Length = 587
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 91/217 (41%), Gaps = 11/217 (5%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
+E + E + NP +A L ++ + + EA+ V I + ++ A+
Sbjct: 309 DEAKVRFETCIKNNPQQADAYILLGKLFMTVGQYSEAIKVFKTYITINDVDYIGHYNLAE 368
Query: 192 VQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE 251
E + AI + + + + E+ + L + YD +++E+EK I+ C +
Sbjct: 369 CYFQNKEYKNAIAEYMQTISHNQKSHESLYKLGLIYD----EIDEIEKAID-----CYRA 419
Query: 252 --KKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD 309
+ KSD D + + +H E+L Y +K P +FR Y G++ L++ +
Sbjct: 420 AIQLKSDFIDAYNNLGIVFAKSQRHVESLAAYTAGIKLNPDNFRLYFNMGVVLFELKRYE 479
Query: 310 EAEKQFEKFRRLVPRNHPYREYFVDNMVATKIFGEKV 346
++ F + L P + Y ++ K + E +
Sbjct: 480 DSADAFVRAVELNPEDKDVYYYLGASLTELKQYDEAI 516
>gi|365879991|ref|ZP_09419382.1| putative Peptidase, Caspase-like domain and TPR repeats (fragment)
[Bradyrhizobium sp. ORS 375]
gi|365291987|emb|CCD91913.1| putative Peptidase, Caspase-like domain and TPR repeats (fragment)
[Bradyrhizobium sp. ORS 375]
Length = 211
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 136 KEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSY 195
K + +AANP+D AL +V +A+ D I + P + E + ++
Sbjct: 53 KSLTAKIAANPDDAAALYRRGQVYASKGAYPQAIHDFDESIRINPKDVEALNNRCWARTV 112
Query: 196 AGESEAAIKGFEEILRKDPLRVEAY--HGLVMAYDGSDKK 233
GE +AA++ E LR P V+A GLV G+ K
Sbjct: 113 VGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGATKN 152
>gi|357024249|ref|ZP_09086410.1| adenylate class-3/4/guanylyl cyclase [Mesorhizobium amorphae
CCNWGS0123]
gi|355543935|gb|EHH13050.1| adenylate class-3/4/guanylyl cyclase [Mesorhizobium amorphae
CCNWGS0123]
Length = 631
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 73/150 (48%), Gaps = 10/150 (6%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L+ + +++ A TL + + Q+ +A I+R I + PN+ + + + G+++A
Sbjct: 452 LSLDDSEVRARITLGHIHLFRQRYNQAEAEIERAIAINPNDAHGLAGRGTILLWLGQTDA 511
Query: 202 AIKGFEEILRKDP-LRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDF 260
AI+ E+ R DP L L MAY +++R A+E+ + + + +F
Sbjct: 512 AIEALEQAQRIDPDLNAIDRFALSMAY--------YLKRRYGAAIEQAELSLRTTAGANF 563
Query: 261 -KLLIAQIKVMESKHSEALRVYEELVKEEP 289
++L+A +++ +A RV + + +P
Sbjct: 564 SRILLAAAYAQDNRAEDAARVVTMIRRIDP 593
>gi|347541179|ref|YP_004848605.1| hypothetical protein NH8B_3438, partial [Pseudogulbenkiania sp.
NH8B]
gi|345644358|dbj|BAK78191.1| TPR repeat-containing protein [Pseudogulbenkiania sp. NH8B]
Length = 592
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E ++ + NP +A + S EA+ ++DR IEL P E L +
Sbjct: 126 EAVEDFNHAITLNPTYADAYCNMGGALADSDAFAEALSMLDRAIELAPAMAEAHLNRGNA 185
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAY----HGLVMAYDGSDKKLNEVEKRIEKAMERC 248
+ E A+ +E+ L+ P EA H LV +LN E + +
Sbjct: 186 LNGLRRFEEAVVSYEQALKLRPNYSEALCNRGHSLV--------ELNRYEDALHSYNQAI 237
Query: 249 KKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
K EK + + K A+ V K EAL YE ++ +P D + ++ L
Sbjct: 238 KLEKNYASAFNGK---AKSLVGLKKIDEALVCYERAIELKPEDALYEWGKALLLILQGNY 294
Query: 309 DEAEKQFEKFRR 320
+E + +E +R
Sbjct: 295 EEGWRLYESRKR 306
>gi|254410362|ref|ZP_05024141.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182568|gb|EDX77553.1| Tetratricopeptide repeat family [Coleofasciculus chthonoplastes PCC
7420]
Length = 560
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 167 EAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLV 224
EA+ D+ +E++P+++ + SY G E AI +++ L P A++ G+
Sbjct: 349 EAIASYDKALEIQPDDYYAWYFRGIALSYLGRYEEAIASYDKALEIQPDDYYAWYFRGIA 408
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
++Y G + E +KA+E + R L ++ EA+ Y++
Sbjct: 409 LSYLG---RYEEAIASYDKALEIQPDDYYAWYFRGIAL------SYLGRYEEAIASYDKA 459
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYREYF 332
++ +P + +G + L++ +EA +EK + P H Y YF
Sbjct: 460 LEIKPDYQSGWSHRGNALSFLKRYEEAITSYEKALKFKPDYH-YAWYF 506
>gi|39998281|ref|NP_954232.1| hypothetical protein GSU3191 [Geobacter sulfurreducens PCA]
gi|409913632|ref|YP_006892097.1| hypothetical protein KN400_3128 [Geobacter sulfurreducens KN400]
gi|39985227|gb|AAR36582.1| TPR domain protein [Geobacter sulfurreducens PCA]
gi|298507217|gb|ADI85940.1| TPR domain protein [Geobacter sulfurreducens KN400]
Length = 638
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
AI + E L+ DP +EA+ L Y +KLN+++ ++ E + +K ++ R+
Sbjct: 420 AIASYNEALKLDPDNLEAHRELAAVY----RKLNQMDDASKQYREVLRIKKDDAEARN-- 473
Query: 262 LLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
++ I V E K+ E + + +E V+ P D + G+I+ + D AE + K
Sbjct: 474 -ILTAIYVKEKKYDELVPLLQEGVELAPNDAMSHYKLGLIHEFRKDYDSAEVSYRK 528
>gi|149277491|ref|ZP_01883632.1| TPR-repeat-containing protein [Pedobacter sp. BAL39]
gi|149231724|gb|EDM37102.1| TPR-repeat-containing protein [Pedobacter sp. BAL39]
Length = 562
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 77/187 (41%), Gaps = 24/187 (12%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E E I + L + +I + L E+ + + V V D +I L P + K
Sbjct: 82 EAEFSIRKALGIDKENIWYWKMLAELYKRKGDMPGLVKVFDEMIRLSPENDAYYFDKCNA 141
Query: 193 QSYAGESEAAIKGFEEILRK-------DPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAM 245
Q G++ +A+KG+E IL+K D R G +G++ + ++++ I +
Sbjct: 142 QLLMGDTASAMKGYELILQKFGPSAELDEARQRVASG-----NGAETSIQQIDQIISGTV 196
Query: 246 ERCKKEKKKSDLRDFKLLIAQIKVME-SKHSEALRVYEELVKEEPRDFRPYLCQGIIYTL 304
K KS+L +ME H+ AL + ++ + P + L Y
Sbjct: 197 SDLKGALNKSEL-----------LMEKGDHAAALLLLKKTEEAYPESYEVELALADHYKA 245
Query: 305 LRKKDEA 311
L+ DEA
Sbjct: 246 LKNSDEA 252
>gi|145541086|ref|XP_001456232.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424042|emb|CAK88835.1| unnamed protein product [Paramecium tetraurelia]
Length = 1162
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 26/176 (14%)
Query: 161 KSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP-----L 215
K + EA+ D+ I++ P ++ KA + + A++ FE + KDP +
Sbjct: 556 KMNRFEEALQYFDKAIQINPENSQYYYNKASTLNNLNRYKEALEQFEVSISKDPETLQSI 615
Query: 216 RVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE--KKKSDLRDFKLLIAQIKVME-S 272
+ +AY L M KR+E+A+E C ++ SD + + +ME +
Sbjct: 616 KGKAYTLLKM-------------KRLEEALE-CYSSIIQENSDTEK----LEAMTLMEMN 657
Query: 273 KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPY 328
+ EAL+ Y+ ++ P + Y C+ I ++K DEA ++ + P+N Y
Sbjct: 658 RFEEALKYYDFAIQIGPENSECYHCKAITLFKMKKFDEALNYYDLAIQKQPQNSVY 713
>gi|145525386|ref|XP_001448515.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416059|emb|CAK81118.1| unnamed protein product [Paramecium tetraurelia]
Length = 539
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 13/204 (6%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
YEE K +Q + +P + + K L EA++ D I+ P + KA
Sbjct: 262 YEEALKNYDQAIQKDPENSYYYNGKADTLQKMNSLDEALENYDLAIQKNPENSYYYNGKA 321
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKK 250
E A++ ++ ++K+P + Y+G + +K+N R E+A+E
Sbjct: 322 DTLQKMNRFEEALENYDSAIQKNPENSDYYNGKA----DTLQKMN----RFEEALENYDS 373
Query: 251 --EKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
+K D R + + M ++ EA+ Y+ +++ P D R Y + I + +
Sbjct: 374 AIQKNPEDSRYYFNKAITLNNM-NRFEEAVENYDSAIQKNPEDSRYYFNKAITLNNMNRF 432
Query: 309 DEAEKQFEKFRRLVPRNHPYREYF 332
+EA ++ + P N Y YF
Sbjct: 433 EEALNNYDSATQKNPENSDY--YF 454
>gi|85716815|ref|ZP_01047781.1| Tetratricopeptide [Nitrobacter sp. Nb-311A]
gi|85696313|gb|EAQ34205.1| Tetratricopeptide [Nitrobacter sp. Nb-311A]
Length = 736
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
A PN E L ++ I+ + A V+ ++ P + QLL A +Q G+ +AA
Sbjct: 607 AKQPNSPEGYAALSDLYIRQKNYDAAESVLQAGLKQMPADLNLQLLYAGLQILKGDHDAA 666
Query: 203 IKGFEEILRKDPLRVEAYHGLV 224
I +E ILR P A + LV
Sbjct: 667 ISQYESILRARPNAAVAVNNLV 688
>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 949
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN-EFEWQLLK 189
Y+ + + +A P D + + +L EAV+ D +IE++P+ E W+ LK
Sbjct: 517 YDRAVEAYDGAIALYPGDPAVWYNRGLLLYNASRLEEAVESFDEVIEIDPSYEGVWR-LK 575
Query: 190 AQVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMER 247
G S+ AI ++E L P V ++ G+V+ S + E + ++ +E
Sbjct: 576 GLALYALGRSDEAIDCYDEALEISPSEVSLWYNRGVVLF---SLGRYGEAIESYDRVIEL 632
Query: 248 CKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+ EK ++ + L ++ EA+ YE++++ P + + + +G+ + +L
Sbjct: 633 DRYEKGEA---LYSL---------GRYDEAIECYEKVLEVSPLEAKAWYQKGLAHQIL-- 678
Query: 308 KDEAEKQFEKFRRLVPRNHPYRE 330
+ E+ E + R+V + Y E
Sbjct: 679 -GDYERSAECYDRVVEIDPGYEE 700
>gi|220928615|ref|YP_002505524.1| hypothetical protein Ccel_1187 [Clostridium cellulolyticum H10]
gi|219998943|gb|ACL75544.1| Tetratricopeptide TPR_2 repeat protein [Clostridium cellulolyticum
H10]
Length = 293
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKS- 255
G+ E A+K + ++L D AY+GL + YD K +KA+E KK + +
Sbjct: 44 GKQEDAVKTYNKVLEMDSNEARAYYGLAIIYDE--------RKEFDKAIEMYKKAIEINP 95
Query: 256 DLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQF 315
D +A + EA YE+ + EP F Y +Y + K D+A
Sbjct: 96 DYSKAYFFLANSCDESGRKDEAAEYYEKAAELEPYHFWAYNNLAAVYEEIGKYDKALIAI 155
Query: 316 EKFRRLVPRNH 326
K L P NH
Sbjct: 156 RKGLELEP-NH 165
>gi|333984282|ref|YP_004513492.1| hypothetical protein [Methylomonas methanica MC09]
gi|333808323|gb|AEG00993.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylomonas
methanica MC09]
Length = 799
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAG 197
+E+ L NP D A+ +++KS +L +AV ++ + IE +P+ + + + +
Sbjct: 155 VEKALQKNPEDASAILMSASIKVKSNQLDDAVTLLKQAIEKQPDSVPLRTMLVGIYARNK 214
Query: 198 ESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERC-KKEKKKSD 256
+ A + E I++ P V+ Y L + G+ K+L++ E + A+ + + + K++
Sbjct: 215 QIPEAEELLESIVKIQPNEVQHYKNLALFQVGT-KQLDKAEATLRDAVAKLPENDSAKTN 273
Query: 257 LRDF 260
L DF
Sbjct: 274 LIDF 277
>gi|218128555|ref|ZP_03457359.1| hypothetical protein BACEGG_00125 [Bacteroides eggerthii DSM 20697]
gi|217989279|gb|EEC55593.1| tetratricopeptide repeat protein [Bacteroides eggerthii DSM 20697]
Length = 319
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 15/182 (8%)
Query: 148 DIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV----QSYAGESEAAI 203
D E + L +V I+S +L EA +++R+I +EP L A V + Y +EAA
Sbjct: 59 DFETMGYLAQVYIQSNELDEAHQLLERMIRIEPEHTSTLLTLANVCYMQEDYTAMAEAAQ 118
Query: 204 KGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLL 263
K + +E G MA+ K N I K K D + +LL
Sbjct: 119 K---------AIAIE--EGNAMAHYLLGKAGNGQNNGIMCIAHLTKAIVLKDDFTEARLL 167
Query: 264 IAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
A+ ++ EA+ + ++ ++P D L +G I + EAE + L P
Sbjct: 168 RAEALTKMHQYKEAMEDIDAILAQDPDDESAILLRGKIKEATGTEGEAEADYLHITELNP 227
Query: 324 RN 325
N
Sbjct: 228 FN 229
>gi|407784334|ref|ZP_11131501.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein, partial [Oceanibaculum indicum P24]
gi|407197118|gb|EKE67205.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
protein, partial [Oceanibaculum indicum P24]
Length = 1043
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 15/199 (7%)
Query: 133 EKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV 192
E E + + + NP + A L +L EA++ + + ++P + A +
Sbjct: 842 EAESWMRKSTSLNPGNAAAHYNLGNNLKAQGRLTEALESFETAVSIQPAYIDALHQVAAM 901
Query: 193 QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEK 252
Q G+ E A++G+ +L P +E + + V +R+++ E +
Sbjct: 902 QQAQGKLELALQGYRRVLDIQPQHIETLN-----------NIGVVLERLDRHPEATPFLR 950
Query: 253 KKSDLR-DFKLLIAQIKVMESKH---SEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKK 308
K ++LR D + + V+ S +EALR + V+ +P Y + L ++
Sbjct: 951 KAAELRPDIAEVQCNLGVVLSHSGSLTEALRCLQRAVELKPAFVGAYGNMAAVLDKLGQE 1010
Query: 309 DEAEKQFEKFRRLVPRNHP 327
DEA F++ P + P
Sbjct: 1011 DEAAAVFQQGLAAAPDDAP 1029
>gi|436735950|ref|YP_007318078.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428267551|gb|AFZ33495.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 222
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 11/171 (6%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
AA E L T +++ A+ ++IEL P+ E + ++ G+ + A
Sbjct: 30 AAESTQAENLFTQASTQLERGNFQGAIQDFSQVIELNPDYMEAYCERGLAYAFLGDYQEA 89
Query: 203 IKGFEEILRKDPLRVEAY--HGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDF 260
I+GF + + DP V+AY G +A + +++ IEK E + D +
Sbjct: 90 IEGFRQAIEIDPNHVDAYARWGTALA------SVGDLQGAIEKFDETLRLAPNFLDAY-Y 142
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEA 311
+A + + H +A+ + ++++ EP + Y +G+ Y L + A
Sbjct: 143 NRGLAHYSL--NNHEQAVEDFTQVIQLEPALAQAYGRRGLAYYALSNRSAA 191
>gi|427731479|ref|YP_007077716.1| hypothetical protein Nos7524_4360 [Nostoc sp. PCC 7524]
gi|427367398|gb|AFY50119.1| tetratricopeptide repeat protein [Nostoc sp. PCC 7524]
Length = 379
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 13/198 (6%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
++ E Q L +PN A L + + +L AV I + PN E
Sbjct: 76 WQGAEYAFRQALQRDPNLGMARNYLGNIFLMQNRLDIAVQEYGEAIRINPNLGEAYYNLG 135
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRIEKAMERC 248
G+ EAAI + + L DP R A++ GLV+ G ++ + I +
Sbjct: 136 LALQRQGQKEAAITAYRQALVIDPTRTAAHYNLGLVLYEQG------QLPEAIAAYQQAT 189
Query: 249 KKEKKKSDLRDFKLLIAQIKVMES-KHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRK 307
+ ++ + L IA + ES K EA+ Y++++K +P++ Y G + L +
Sbjct: 190 NFDPSNANAY-YNLAIA---LQESGKMEEAIVAYQQVLKLDPKNAAAYSNLGSLMALQGQ 245
Query: 308 KDEAEKQFEKFRRLVPRN 325
EA + + R P+N
Sbjct: 246 TAEAIAVYTQAVRQDPKN 263
>gi|218246665|ref|YP_002372036.1| hypothetical protein PCC8801_1837 [Cyanothece sp. PCC 8801]
gi|257059707|ref|YP_003137595.1| hypothetical protein Cyan8802_1863 [Cyanothece sp. PCC 8802]
gi|218167143|gb|ACK65880.1| TPR repeat-containing protein [Cyanothece sp. PCC 8801]
gi|256589873|gb|ACV00760.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 8802]
Length = 344
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
+P+D + V IK ++ +A + + + + L P +LL AQ+ G+ + AI
Sbjct: 115 DPSDATGYLGIGRVLIKQKQYPQAKEQLQKALVLNPQLILARLLMAQIYQEQGDIDQAIT 174
Query: 205 GFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI 264
E +L+ +P AY GL Y +K K E+A + K + L ++L
Sbjct: 175 EIESVLKLNPTLSNAYQGLGNLY-LKQEKYALARKNFEQAQQLNPKIPAAAKLPYLEVL- 232
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYT 303
V ++ EA + +E+ ++P + R G IY
Sbjct: 233 ----VQDNALDEATAILKEMPNQKPLEVRKQKLWGDIYV 267
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,100,273,015
Number of Sequences: 23463169
Number of extensions: 206880314
Number of successful extensions: 1159268
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 4687
Number of HSP's that attempted gapping in prelim test: 1140750
Number of HSP's gapped (non-prelim): 19020
length of query: 355
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 212
effective length of database: 9,003,962,200
effective search space: 1908839986400
effective search space used: 1908839986400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)