BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040440
(355 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q61371|IFT88_MOUSE Intraflagellar transport protein 88 homolog OS=Mus musculus
GN=Ift88 PE=1 SV=2
Length = 824
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P++IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 617 PSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 676
Query: 206 FEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVE------KRIEKAMERCKKEKKKS 255
++EI RK P VE LV +D L EV+ KR+EK M+ ++++ KS
Sbjct: 677 YKEIHRKFPENVECLRFLVRL--CTDIGLKEVQEYATKLKRLEK-MKEMREQRIKS 729
>sp|P38042|CDC27_YEAST Anaphase-promoting complex subunit CDC27 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CDC27 PE=1
SV=2
Length = 758
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 75/189 (39%), Gaps = 33/189 (17%)
Query: 168 AVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL---- 223
A+ ++ +L+PN L+ S S++A + + L DP AY+GL
Sbjct: 559 AIKAFEKATQLDPNFAYAYTLQGHEHSSNDSSDSAKTCYRKALACDPQHYNAYYGLGTSA 618
Query: 224 --------------------------VMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDL 257
+ GS +KL EK ++ C + S L
Sbjct: 619 MKLGQYEEALLYFEKARSINPVNVVLICCCGGSLEKLGYKEKALQYYELACHLQPT-SSL 677
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
+K+ Q+ ++++ AL+ +EELVK P D + G Y ++ +K +A K+
Sbjct: 678 SKYKM--GQLLYSMTRYNVALQTFEELVKLVPDDATAHYLLGQTYRIVGRKKDAIKELTV 735
Query: 318 FRRLVPRNH 326
L P+ +
Sbjct: 736 AMNLDPKGN 744
>sp|P10505|APC3_SCHPO Anaphase-promoting complex subunit 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nuc2 PE=1 SV=3
Length = 665
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 29/202 (14%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQL-LKAQVQSYAGESE 200
L NP E+ L ++ +A+ I+R I+L+P FE+ L+ S E E
Sbjct: 424 LETNPYSPESWCILANCFSLQREHSQALKCINRAIQLDPT-FEYAYTLQGHEHSANEEYE 482
Query: 201 AAIKGFEEILRKDPLRVEAYHGLVMAY------DGSD---KKLNEVEKR-------IEKA 244
+ F + +R + A++GL M Y D +D ++ E+ I
Sbjct: 483 KSKTSFRKAIRVNVRHYNAWYGLGMVYLKTGRNDQADFHFQRAAEINPNNSVLITCIGMI 542
Query: 245 MERCKKEKKKSDLRDFKLLI-----------AQIKVMESKHSEALRVYEELVKEEPRDFR 293
ERCK KK D D + A++ ++ H +AL E+L P +
Sbjct: 543 YERCKDYKKALDFYDRACKLDEKSSLARFKKAKVLILLHDHDKALVELEQLKAIAPDEAN 602
Query: 294 PYLCQGIIYTLLRKKDEAEKQF 315
+ G I+ +RKK+ A K F
Sbjct: 603 VHFLLGKIFKQMRKKNLALKHF 624
>sp|Q5QZK7|RNH2_IDILO Ribonuclease HII OS=Idiomarina loihiensis (strain ATCC BAA-735 /
DSM 15497 / L2-TR) GN=rnhB PE=3 SV=1
Length = 187
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 102 IAAPVAAAATV-------ESTNESTKDTTSAREDVSYEEKEKEIEQHLA-ANPNDIEALQ 153
IA PV AAA + E N+S K + RE +S E KEK + +A ++P++IEA+
Sbjct: 13 IAGPVVAAAVILDPDNPIEGLNDSKKLSEKKREKLSLEIKEKALYWAIAQSDPDEIEAIN 72
Query: 154 TLMEVRIKSQKLVEAVDVIDRLIELEPN 181
L Q+ VEA+ V ++ ++ N
Sbjct: 73 ILWASMKAMQRAVEALPVKPDMVLVDGN 100
>sp|Q54M21|DNJC3_DICDI DnaJ homolog subfamily C member 3 homolog OS=Dictyostelium
discoideum GN=dnajc3 PE=3 SV=1
Length = 502
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 164 KLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
K + A+ ++R IE P+ +L +A++QS G E A+ ++ +L+ P +A +
Sbjct: 84 KNILALSDLNRAIEANPDNIHARLKRAKIQSSLGRFEEAMDEYKRVLKIRPDNSQAKQQI 143
Query: 224 VMAYDGSDKKLNEVEKRIEKAMERCKKEKKK--------------SDLRDFKLLIAQIKV 269
+KL +VE+++EK + K EK SDL++ +L++ +
Sbjct: 144 --------EKLKKVEQQLEKVRDMVKVEKNYKDSIAILLDIQSVVSDLKEVRLMLCECFF 195
Query: 270 MESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYR 329
+ H + L ++K EP +G + + +K+ A K ++ + P N R
Sbjct: 196 QQGDHRKVLDETMTILKSEPSSVAALYWRGKTFFSMGEKEIAMKFLKEGLKFDPDNTNCR 255
>sp|Q13099|IFT88_HUMAN Intraflagellar transport protein 88 homolog OS=Homo sapiens
GN=IFT88 PE=2 SV=2
Length = 833
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 146 PNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKG 205
P +IE ++ L I +Q +A+ +R ++P + +WQL+ A +G + A+
Sbjct: 626 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 685
Query: 206 FEEILRKDPLRVEAYHGLV 224
+++ RK P VE LV
Sbjct: 686 YKDTHRKFPENVECLRFLV 704
>sp|Q6ZXV5|TMTC3_HUMAN Transmembrane and TPR repeat-containing protein 3 OS=Homo sapiens
GN=TMTC3 PE=1 SV=2
Length = 915
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 173 DRLIELEPNEFEWQLLKAQVQSYAGESEA---AIKGFEEILRKDPLRVEAYHGLVM-AYD 228
+R +EL P A V +GE + A K + ++PL Y L M A D
Sbjct: 622 NRALELNPKHKLALFNSAIVMQESGEVKLRPEARKRLLSYINEEPLDANGYFNLGMLAMD 681
Query: 229 GSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEE 288
DKK NE E ++KA+ K ++D R +A + +K +AL + EEL++
Sbjct: 682 --DKKDNEAEIWMKKAI------KLQADFRSALFNLALLYSQTAKELKALPILEELLRYY 733
Query: 289 PRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRRLVPRN 325
P + + +G I + +KKD A+K FE+ + P N
Sbjct: 734 PDHIKGLILKGDI-LMNQKKDILGAKKCFERILEMDPSN 771
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 151 ALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV-QSYAGESEAAIKGFEEI 209
AL L + ++ K ++A+ +++ L+ P+ + +LK + + + A K FE I
Sbjct: 705 ALFNLALLYSQTAKELKALPILEELLRYYPDHIKGLILKGDILMNQKKDILGAKKCFERI 764
Query: 210 LRKDPLRVEAYHGLVMAY 227
L DP V+ H L + Y
Sbjct: 765 LEMDPSNVQGKHNLCVVY 782
>sp|Q58741|Y1345_METJA TPR repeat-containing protein MJ1345 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1345 PE=4 SV=1
Length = 314
Score = 38.9 bits (89), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E K +++ N DI AL ++++ I +L +A++ + ++L P++ L K
Sbjct: 197 YGEALKCLKKVFERNNKDIRALMYIIQILIYLGRLNQALEYTKKALKLNPDDPLLYLYKG 256
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
+ + G+ AIK F+++L +P +A++G +A + KL ++ + IE
Sbjct: 257 IILNKLGKYNEAIKYFDKVLEINPNIPDAWNGKAIALE----KLGKINEAIE 304
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 168 AVDVIDRLIELEP-NEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA--YHGLV 224
A+ +ID++++ P + W K ++ G+ + +++ F+ L+ +P ++ Y G +
Sbjct: 132 ALKIIDKILKKYPKSAIAWAE-KGEILYREGKLKKSLECFDNALKINPKDCQSLLYKGEI 190
Query: 225 MAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEEL 284
+ G + E K ++K ER K D+R + I QI + + ++AL ++
Sbjct: 191 LFKLG---RYGEALKCLKKVFERNNK-----DIRAL-MYIIQILIYLGRLNQALEYTKKA 241
Query: 285 VKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+K P D YL +GII L K +EA K F+K + P
Sbjct: 242 LKLNPDDPLLYLYKGIILNKLGKYNEAIKYFDKVLEINP 280
>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus
GN=Tmtc1 PE=2 SV=2
Length = 942
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 21/183 (11%)
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEI 209
E L L + + + EA++V + L+P++ E +L AQV + G+++ A K I
Sbjct: 744 EVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHI 803
Query: 210 LRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKE---------KKKSDLRDF 260
+ ++P +E Y L+ A + + + IEKA++ K+ K + LR+
Sbjct: 804 VSEEPRCLECYR-LLSAIHSKQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQ 862
Query: 261 KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRR 320
LL +A YE V +P + ++ G I + A +E+ +
Sbjct: 863 NLL-----------DKAFESYEAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERALK 911
Query: 321 LVP 323
LVP
Sbjct: 912 LVP 914
>sp|P45400|CYCH_RHIME Cytochrome c-type biogenesis protein CycH OS=Rhizobium meliloti
(strain 1021) GN=cycH PE=3 SV=2
Length = 381
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 39/158 (24%)
Query: 139 EQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGE 198
E HLA NP D L + ++ +L +AV DR I L G
Sbjct: 144 ENHLALNPQDGAGWDLLAPIYMRHGRLDDAVAAYDRAIRL-----------------LGP 186
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLR 258
+ A + G+ E L V GLV A E + ++KA+ + + +
Sbjct: 187 TPARMGGYAEAL------VAQAGGLVTA---------EAQNALQKALALDPDDPRSA--- 228
Query: 259 DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
F L + + E KH+EAL + +L + P D P+L
Sbjct: 229 -FYLALGLKQ--EGKHAEALAAFRKLAESSPADA-PWL 262
>sp|Q8VY89|APC7_ARATH Anaphase-promoting complex subunit 7 OS=Arabidopsis thaliana
GN=APC7 PE=2 SV=1
Length = 558
Score = 37.0 bits (84), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 15/148 (10%)
Query: 183 FEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIE 242
E +L A++ +G + AI ++E LR+ P +EA GL +L K I
Sbjct: 138 LEMNILMAKLHRNSGYNRGAIAFYKECLRQCPYVLEAVIGLA--------ELGVSAKDII 189
Query: 243 KAMERCKKEKKKSDLRDF-------KLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPY 295
+ + K L + + AQ V + AL ++ EL++ P +
Sbjct: 190 SSFTQTSNRSAKVSLDQIDPTRWLQRYVEAQCCVASHAYKGALELFAELLQRFPNNVHLL 249
Query: 296 LCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
+ ++ K DEA +FEK R + P
Sbjct: 250 TETAKVEAIIGKNDEAIMRFEKVRSIDP 277
>sp|P31759|FRZF_MYXXA Protein methyltransferase FrzF OS=Myxococcus xanthus GN=frzF PE=4
SV=1
Length = 593
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 119/297 (40%), Gaps = 36/297 (12%)
Query: 17 SFNHHRPSFPKSISFISLRTPPSSSPFKFSCIRASSSPASQQNPKPSLLRTLTPLSSPLI 76
+F + RP KS+ LR P + R + A + + +L PL++ L
Sbjct: 268 AFVYRRPLNDKSMRAPPLRITPYPGEPDVAARRPVPADAFTADLRKRMLPEDVPLTTRLP 327
Query: 77 KITSVTVAAAA-----------------LLFMRLPF---HSIKPAIAA---PVAAAATVE 113
+++ +VAA ++ RLP HS PAIAA A TV
Sbjct: 328 AVSASSVAAPGSPSVTLPALGASSSPRSVVPGRLPAVSPHSPLPAIAARSRVTAELPTVG 387
Query: 114 STNESTKDTTSAREDVSYEEKEKEIEQHLAANPNDIEALQTL-MEVRIKSQK-LVEAVDV 171
S + + T+ V+ + +E + A P + + L M VR +Q A+
Sbjct: 388 SVDSARPRITTELPAVATTPRAPTVE--VPAWPTLLPPAERLAMAVRKMAQGDFSAAIAG 445
Query: 172 IDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEA-YHGLVMAYDGS 230
+ RL+ EP++ + L + S G A + F + ++++PL VEA G V A
Sbjct: 446 VQRLLADEPSDLDGLLTLGNLFSLTGRIPEAREAFAQAIQREPLCVEARVFGGVAALQAG 505
Query: 231 DKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKE 287
+ L+E + KA+ + L L+AQ+ H A R Y + +
Sbjct: 506 E--LSEARSELSKAL------FLEPTLAIGHYLLAQVHERTQDHEAARRSYRNAIAQ 554
>sp|Q9HGM9|DNJC7_SCHPO DnaJ homolog subfamily C member 7 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC543.02c PE=4 SV=1
Length = 476
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 157 EVRIKSQKLVEAVDVIDRLIE-----LEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILR 211
EV +K+++ A++ +DRL +P W LKAQV + + + A K ++LR
Sbjct: 113 EVYLKNKQAGLALNALDRLQRRIDSTTQP-PMSWMYLKAQVYIFQNDMDRAQKIAHDVLR 171
Query: 212 KDPLRVEA--YHGLVMAYDGSDKK 233
+P VEA G VM Y G + K
Sbjct: 172 LNPKNVEALVLRGKVMYYSGENAK 195
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 157 EVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDP 214
+V I + A + ++ L P E +L+ +V Y+GE+ AI F+E L+ DP
Sbjct: 151 QVYIFQNDMDRAQKIAHDVLRLNPKNVEALVLRGKVMYYSGENAKAITHFQEALKLDP 208
>sp|Q8BRH0|TMTC3_MOUSE Transmembrane and TPR repeat-containing protein 3 OS=Mus musculus
GN=Tmtc3 PE=2 SV=2
Length = 920
Score = 35.8 bits (81), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 125 AREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFE 184
A +D E E +++ + P+ AL L + ++ K ++A+ +++ L++ P+ +
Sbjct: 683 AMDDKKDSEAESWMKKAIKLQPDFRSALFNLALLYSQTAKELKALPILEELLKYYPDHTK 742
Query: 185 WQLLKAQV-QSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEK 243
+LK + + + A K FE+IL DP V+ H L + Y EK + K
Sbjct: 743 GLILKGDILMNQKKDIPGAKKCFEKILEMDPSNVQGKHNLCVVYFE--------EKELLK 794
Query: 244 AMERCKKE 251
A ERC E
Sbjct: 795 A-ERCLVE 801
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 96/234 (41%), Gaps = 49/234 (20%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQ 191
EE ++ Q ++ P+ +A + E+ +K K ++A + + +EL+ N + A
Sbjct: 551 EEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNLAI 610
Query: 192 VQSYAGESEAAIKGFEEILRKDP--------------------LRVEA------------ 219
V E A+K F L +P LR EA
Sbjct: 611 VYIELKEPNEALKNFNRALELNPKHKLALFNSAILMQESGEVKLRPEARKRLLNYVNEEP 670
Query: 220 -----YHGLVM-AYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLIAQIKVMESK 273
Y L M A D DKK +E E ++KA+ K + D R +A + +K
Sbjct: 671 QDANGYFNLGMLAMD--DKKDSEAESWMKKAI------KLQPDFRSALFNLALLYSQTAK 722
Query: 274 HSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKD--EAEKQFEKFRRLVPRN 325
+AL + EEL+K P + + +G I + +KKD A+K FEK + P N
Sbjct: 723 ELKALPILEELLKYYPDHTKGLILKGDI-LMNQKKDIPGAKKCFEKILEMDPSN 775
>sp|Q58208|Y798_METJA TPR repeat-containing protein MJ0798 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0798 PE=4 SV=1
Length = 334
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLL---KAQVQSYAGE 198
L P+DI+ + + K +K A+ ++ ++L PN FE + + ++ Y GE
Sbjct: 229 LELKPDDIDLILKVAFTYFKLKKYKHALKYFEKALKLNPNVFELEQIYESMGRIYIYLGE 288
Query: 199 SEAAIKGFEEILRKDPLRVEAYHGLVMAYD--GSDKKLNEVEKRI 241
E AI+ FE++ + E Y + + Y+ G+ +K E K++
Sbjct: 289 DEKAIECFEKLKEINLYHYEIYEIIALTYEEVGNIEKAKEFYKKL 333
>sp|O94826|TOM70_HUMAN Mitochondrial import receptor subunit TOM70 OS=Homo sapiens
GN=TOMM70A PE=1 SV=1
Length = 608
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQV------QSYAGE 198
+P + + +++I ++ EAV D I L P E L +AQ Q+Y G
Sbjct: 397 DPQNADVYHHRGQLKILLDQVEEAVADFDECIRLRP---ESALAQAQKCFALYRQAYTGN 453
Query: 199 S----EAAIKGFEEILRKDPLRVEAY 220
+ +AA+KGFEE+++K P E Y
Sbjct: 454 NSSQIQAAMKGFEEVIKKFPRCAEGY 479
>sp|Q5R8D8|DNJC7_PONAB DnaJ homolog subfamily C member 7 OS=Pongo abelii GN=DNAJC7 PE=2
SV=1
Length = 494
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 39/191 (20%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
N N + + + E + + + V +DR +E P +++LKA+ + G A
Sbjct: 138 NANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQS 197
Query: 205 GFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRI-------------EKAMERCK 249
+ILR D +A + GL + Y+ +EK + EKA C+
Sbjct: 198 VASDILRMDSTNADALYVRGLCLYYEDC------IEKAVQFFVQALRMAPDHEKACIACR 251
Query: 250 -----KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRP----YLCQGI 300
K KK+ + FK E + A +Y E + +P + + Y +G
Sbjct: 252 NAKALKAKKEDGNKAFK---------EGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGT 302
Query: 301 IYTLLRKKDEA 311
+ + LRK D+A
Sbjct: 303 VNSKLRKLDDA 313
>sp|Q99615|DNJC7_HUMAN DnaJ homolog subfamily C member 7 OS=Homo sapiens GN=DNAJC7 PE=1
SV=2
Length = 494
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 39/191 (20%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
N N + + + E + + + V +DR +E P +++LKA+ + G A
Sbjct: 138 NANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQS 197
Query: 205 GFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRI-------------EKAMERCK 249
+ILR D +A + GL + Y+ +EK + EKA C+
Sbjct: 198 VASDILRMDSTNADALYVRGLCLYYEDC------IEKAVQFFVQALRMAPDHEKACIACR 251
Query: 250 -----KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRP----YLCQGI 300
K KK+ + FK E + A +Y E + +P + + Y +G
Sbjct: 252 NAKALKAKKEDGNKAFK---------EGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGT 302
Query: 301 IYTLLRKKDEA 311
+ + LRK D+A
Sbjct: 303 VNSKLRKLDDA 313
>sp|Q43468|STIP_SOYBN Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1
Length = 569
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%)
Query: 131 YEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKA 190
Y E K + + NP D +A K + E + ++ IEL+P + K
Sbjct: 397 YPEATKHYTEAIKRNPKDAKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFSKGYTRKG 456
Query: 191 QVQSYAGESEAAIKGFEEILRKDPLRVEAYHGL 223
VQ E + A++ + E L+ DP E G+
Sbjct: 457 AVQFSMKEYDKALETYREGLKHDPNNQELLDGI 489
Score = 33.1 bits (74), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Query: 232 KKLNEVEKRIEKAMERCKKEKKKSDLRDFKLLI-AQIKVME----SKHSEALRVYEELVK 286
KKLNE EK KKE ++ + D KL A+ K E K+ EA + Y E +K
Sbjct: 358 KKLNEAEK--------AKKELEQQEYFDPKLADEAREKGNELFKQQKYPEATKHYTEAIK 409
Query: 287 EEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVP 323
P+D + Y + YT L E K EK L P
Sbjct: 410 RNPKDAKAYSNRAACYTKLGAMPEGLKDAEKCIELDP 446
>sp|Q84JR9|TTL4_ARATH TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana
GN=TTL4 PE=2 SV=1
Length = 682
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 143 AANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAA 202
AA +D E ++ V + EA+ + DR I L P ++ +A + +G E A
Sbjct: 205 AAEMSDSEEVKKAGNVMYRKGNYAEALALYDRAISLSPENPAYRSNRAAALAASGRLEEA 264
Query: 203 IKGFEEILRKDPLRVEAYHGLVMAY 227
+K E +R DP A+ L Y
Sbjct: 265 VKECLEAVRCDPSYARAHQRLASLY 289
>sp|Q6C8L8|RNA14_YARLI mRNA 3'-end-processing protein RNA14 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RNA14 PE=3 SV=1
Length = 806
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 138 IEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEP 180
+E +AANP D+ A L+ ++ +KL E+ D+ +R + L P
Sbjct: 196 LEDRIAANPRDMPAWLDLISTIVRKEKLDESRDIYERFLALYP 238
>sp|Q96EQ0|SGTB_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein
beta OS=Homo sapiens GN=SGTB PE=1 SV=1
Length = 304
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 159 RIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVE 218
+K + AVD + IEL+PN + +A QS G AIK E+ + D +
Sbjct: 95 HMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSK 154
Query: 219 AYHGLVMAYDGSDKKLNEVEKRIEKAME 246
AY + +A + K E +KA++
Sbjct: 155 AYGRMGLALTALN-KFEEAVTSYQKALD 181
>sp|Q4V8A2|CDC27_RAT Cell division cycle protein 27 homolog OS=Rattus norvegicus
GN=Cdc27 PE=2 SV=1
Length = 824
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 168 AVDVIDRLIELEPN-EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
A+ R I+++PN + + LL + E + A+ F +R +P A++GL M
Sbjct: 586 AIKFFQRAIQVDPNYAYAYTLLGHEF-VLTEELDKALACFRNAIRVNPRHYNAWYGLGMI 644
Query: 227 YDGSDKKLNEVEKRIEKAME--------RC---------KKEKKKSDLRDFKLLI----- 264
Y +K + E +KA++ C KK +K D + ++I
Sbjct: 645 YY-KQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNP 703
Query: 265 ------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
A + K+ AL+ EEL + P++ Y G +Y L + A F
Sbjct: 704 LCKFHRASVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWA 763
Query: 319 RRLVPRN 325
L P+
Sbjct: 764 MDLDPKG 770
>sp|Q57711|Y941_METJA TPR repeat-containing protein MJ0941 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0941 PE=4 SV=3
Length = 338
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 142 LAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEA 201
L A N + A + L E L++A+ +D+ +ELEP+ + LK S GE +
Sbjct: 27 LEAVANVLRAYRELFE-----GNLIKALYYVDKALELEPDFYLALFLKGLALSAKGEIKE 81
Query: 202 AIKGFEEIL 210
AI FEE+L
Sbjct: 82 AITTFEELL 90
>sp|A2A6Q5|CDC27_MOUSE Cell division cycle protein 27 homolog OS=Mus musculus GN=Cdc27
PE=1 SV=1
Length = 825
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 168 AVDVIDRLIELEPN-EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
A+ R I+++PN + + LL + E + A+ F +R +P A++GL M
Sbjct: 587 AIKFFQRAIQVDPNYAYAYTLLGHEF-VLTEELDKALACFRNAIRVNPRHYNAWYGLGMI 645
Query: 227 YDGSDKKLNEVEKRIEKAME--------RC---------KKEKKKSDLRDFKLLI----- 264
Y +K + E +KA++ C KK +K D + ++I
Sbjct: 646 YY-KQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNP 704
Query: 265 ------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
A + K+ AL+ EEL + P++ Y G +Y L + A F
Sbjct: 705 LCKFHRASVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWA 764
Query: 319 RRLVPRN 325
L P+
Sbjct: 765 MDLDPKG 771
>sp|A7Z061|CDC27_BOVIN Cell division cycle protein 27 homolog OS=Bos taurus GN=CDC27 PE=2
SV=1
Length = 825
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 168 AVDVIDRLIELEPN-EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
A+ R I+++PN + + LL + E + A+ F +R +P A++GL M
Sbjct: 587 AIKFFQRAIQVDPNYAYAYTLLGHEF-VLTEELDKALACFRNAIRVNPRHYNAWYGLGMI 645
Query: 227 YDGSDKKLNEVEKRIEKAME--------RC---------KKEKKKSDLRDFKLLI----- 264
Y +K + E +KA++ C KK +K D + ++I
Sbjct: 646 YY-KQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNP 704
Query: 265 ------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
A + K+ AL+ EEL + P++ Y G +Y L + A F
Sbjct: 705 LCKFHRASVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWA 764
Query: 319 RRLVPRN 325
L P+
Sbjct: 765 MDLDPKG 771
>sp|P30260|CDC27_HUMAN Cell division cycle protein 27 homolog OS=Homo sapiens GN=CDC27
PE=1 SV=2
Length = 824
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 168 AVDVIDRLIELEPN-EFEWQLLKAQVQSYAGESEAAIKGFEEILRKDPLRVEAYHGLVMA 226
A+ R I+++PN + + LL + E + A+ F +R +P A++GL M
Sbjct: 586 AIKFFQRAIQVDPNYAYAYTLLGHEF-VLTEELDKALACFRNAIRVNPRHYNAWYGLGMI 644
Query: 227 YDGSDKKLNEVEKRIEKAME--------RC---------KKEKKKSDLRDFKLLI----- 264
Y +K + E +KA++ C KK +K D + ++I
Sbjct: 645 YY-KQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNP 703
Query: 265 ------AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKF 318
A + K+ AL+ EEL + P++ Y G +Y L + A F
Sbjct: 704 LCKFHRASVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWA 763
Query: 319 RRLVPRN 325
L P+
Sbjct: 764 MDLDPKG 770
>sp|P54493|GLUP_BACSU Rhomboid protease GluP OS=Bacillus subtilis (strain 168) GN=gluP
PE=1 SV=2
Length = 507
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 238 EKRIEKAMERCKKEKKKSDLR-DFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYL 296
E + E+ E E + D D ++A + ++ +A+ + E VK+EP+D Y
Sbjct: 403 EGKYEEVTELLNGEAAQKDASADLLKILAVSDIQIGEYDQAVSLLERAVKKEPKDHASYY 462
Query: 297 CQGIIYTLLRKKDEAEKQFEKFRRLVPRNHPYRE 330
++Y + +AEK + +L P+ Y+E
Sbjct: 463 NLALLYAEKNELAQAEKAIQTAVKLKPKEQRYKE 496
>sp|Q9QYI3|DNJC7_MOUSE DnaJ homolog subfamily C member 7 OS=Mus musculus GN=Dnajc7 PE=1
SV=2
Length = 494
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 78/191 (40%), Gaps = 39/191 (20%)
Query: 145 NPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIK 204
N N + + + EV + + + V +DR +E P +++LKA+ + G A
Sbjct: 138 NANAVMEYEKIAEVDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQF 197
Query: 205 GFEEILRKDPLRVEAYH--GLVMAYDGSDKKLNEVEKRI-------------EKAMERCK 249
+ILR D +A + GL + Y+ +EK + EKA C+
Sbjct: 198 VASDILRMDSTNADALYVRGLCLYYEDC------IEKAVQFFVQALRMAPDHEKACVACR 251
Query: 250 -----KEKKKSDLRDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRP----YLCQGI 300
K KK+ + FK E + A +Y E + +P + + Y +G
Sbjct: 252 NAKALKAKKEDGNKAFK---------EGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGT 302
Query: 301 IYTLLRKKDEA 311
+ + LR+ ++A
Sbjct: 303 VNSKLRQLEDA 313
>sp|O67178|Y1088_AQUAE Uncharacterized protein aq_1088 OS=Aquifex aeolicus (strain VF5)
GN=aq_1088 PE=3 SV=1
Length = 761
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVIDRLIELEPN 181
EE + E+ L+ NPN +E L L + + +L +A+D+ +R + L+P+
Sbjct: 120 EEAQHYWERALSLNPNKVEILYNLGVLHLNKGELEKALDLFERALRLKPD 169
>sp|O24734|THSA_SULTO Thermosome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=thsA PE=1 SV=1
Length = 559
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 95 FHSIKPAIAAP--VAAAATVES-----TNESTKDTTSAREDVSYEEKEKEIEQ--HLAAN 145
HS++ + P VA VE+ E + + +E ++ E+ + +E+ + A
Sbjct: 401 LHSLRNVLMKPMIVAGGGAVETELALRLREYAR-SVGGKEQLAIEKFAEALEEIPMILAE 459
Query: 146 PNDIEALQTLMEVRIKSQK-LVEA-VDVIDRLIE---LEPNEFEWQLLKAQVQSYAGESE 200
+E +QTLM++R K K L+ A VDV++ I L N E +KAQV A E+
Sbjct: 460 TAGMEPIQTLMDLRAKHAKGLINAGVDVMNGKIADDMLALNVLEPVRVKAQVLKSAVEAA 519
Query: 201 AAIKGFEEILRKDPL 215
AI ++++ PL
Sbjct: 520 TAILKIDDLIAAAPL 534
>sp|Q9H6T3|RPAP3_HUMAN RNA polymerase II-associated protein 3 OS=Homo sapiens GN=RPAP3
PE=1 SV=2
Length = 665
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%), Gaps = 20/181 (11%)
Query: 158 VRIKSQKLVEAVDVIDRLIELEPNEFEW--------QLLKAQVQSYAGESEAAIKGFEEI 209
R QKL EA +R++ELEPN FE Q L ++ SY E++ IK E
Sbjct: 210 ARFALQKLEEAKKDYERVLELEPNNFEATNELRKISQALASKENSYPKEADIVIKSTEGE 269
Query: 210 LRKDPLRVEAYHGLVMAYDGSDKKLNEV-EKRIEKAMERCKKEKKKSDLRDFKL----LI 264
+ ++EA A D+ E + E+A+E C +D + L +
Sbjct: 270 RK----QIEAQQNKQQAISEKDRGNGFFKEGKYERAIE-CYTRGIAADGANALLPANRAM 324
Query: 265 AQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEKFRRLVPR 324
A +K+ K+ EA + + + + + + +G T L K +EA++ FE L P
Sbjct: 325 AYLKIQ--KYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPG 382
Query: 325 N 325
N
Sbjct: 383 N 383
>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens
GN=TMTC1 PE=1 SV=3
Length = 882
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 78/186 (41%), Gaps = 27/186 (14%)
Query: 150 EALQTLMEVRIKSQKLVEAVDVIDRLIELEPNEFEWQLLKAQVQSYAGESEAAIKGFEEI 209
E L L + + + EA+ + L+P++ E +L AQV + G+++ A K I
Sbjct: 684 EILSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 743
Query: 210 LRKDPLRVEAYHGLVMAY---DGSDKKLNEVEKRIEKAMERCKKE---------KKKSDL 257
+ ++ +E Y L Y + DK L+ I+KA++ K+ K + L
Sbjct: 744 VSEETGCLECYRLLSAIYSKQENHDKALDA----IDKALQLKPKDPKVISELFFTKGNQL 799
Query: 258 RDFKLLIAQIKVMESKHSEALRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFEK 317
R+ LL +A Y V+ P + ++ G I + K A +E+
Sbjct: 800 REQNLL-----------DKAFESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYER 848
Query: 318 FRRLVP 323
+LVP
Sbjct: 849 ALQLVP 854
>sp|Q8BSY0|ASPH_MOUSE Aspartyl/asparaginyl beta-hydroxylase OS=Mus musculus GN=Asph PE=2
SV=1
Length = 741
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 4/133 (3%)
Query: 197 GESEAAIKGFEEILRKDPLRVEAYHGLVMAYD--GSDKKLNEVEKR-IEKAMERCKKEKK 253
G+ E A+ FEE++RK P A +G D ++ NEV +R IE E
Sbjct: 338 GKIEEAVNAFEELVRKYPQSPRARYGKAQCEDDLAEKQRSNEVLRRAIETYQEAADLPDA 397
Query: 254 KSDLRDFKLLIAQIKVMESKHSEA-LRVYEELVKEEPRDFRPYLCQGIIYTLLRKKDEAE 312
+DL L + H L + LV+ P D G+ Y LL D A+
Sbjct: 398 PTDLVKLSLKRRSERQQFLGHMRGSLLTLQRLVQLFPSDTTLKNDLGVGYLLLGDNDSAK 457
Query: 313 KQFEKFRRLVPRN 325
K +E+ + P +
Sbjct: 458 KVYEEVLNVTPND 470
>sp|P54389|YPIA_BACSU TPR repeat-containing protein YpiA OS=Bacillus subtilis (strain
168) GN=ypiA PE=4 SV=1
Length = 423
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 19/135 (14%)
Query: 132 EEKEKEIEQHLAANPNDIEALQTLMEVRIKSQKLVEAVDVID--RLIELEPNEFEWQLLK 189
EE +K +++ LA +P +EAL TL+ V K + + +D+I R E ++ W L
Sbjct: 289 EEGKKLLQEALALDPGFVEALHTLLAVYHKEEDYDQIIDLIQEVRSYGEEDPKYNWYLAS 348
Query: 190 A--QVQSY--AGES-EAAIKGFEE----------ILRKDPLRVEAYHGL--VMAYDGSDK 232
A +++ Y A +S EAA + E L ++ L+ EA L V+ DG+++
Sbjct: 349 AYTELEQYEEAKQSFEAAYLHYREDRDFLYEYASFLLEEGLQKEALPLLKKVLEMDGANE 408
Query: 233 KLNEVEKRIEKAMER 247
+L E RIE R
Sbjct: 409 ELEETILRIEDEFSR 423
>sp|Q7Z572|SPT21_HUMAN Spermatogenesis-associated protein 21 OS=Homo sapiens GN=SPATA21
PE=2 SV=3
Length = 469
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 66 RTLTPL--SSPLIKITSVTVAAAALLFMRLPFHSIKPA-IAAPVAAAATVESTNESTKDT 122
RTLTP+ S+P + T +V A+ + RLP +PA + APV + D
Sbjct: 115 RTLTPVPTSAPSLPQTPASVPASGPSWARLPAPGPEPAPMGAPVPTSMPCPVLLGPALDL 174
Query: 123 TSAREDVSYEEKEKEIEQHLAANPNDIEALQTLMEVRIKSQK 164
R ++ ++ E+ + A + ++LQ L + R KS++
Sbjct: 175 GWRRMELLHQSSERTLSYAKARQEPEEQSLQKLYQNREKSEE 216
>sp|P89105|CTR9_YEAST RNA polymerase-associated protein CTR9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CTR9 PE=1 SV=3
Length = 1077
Score = 31.6 bits (70), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 202 AIKGFEEILRKDPLRVEAYHGLVMAYDGSDKKLNEVEKRIEKAMERCKKEKKKSDLRDFK 261
AI+ ++++L+ DP + A GL + + S KR+ A+E +K + D D +
Sbjct: 683 AIQLYQKVLQVDPFNIFAAQGLAIIFAES--------KRLGPALEILRKVRDSLDNEDVQ 734
Query: 262 LLIAQIKVMESKHSEALRVYEELVKE-EPRDFRPYL 296
L +A + ++ +A+ YE ++K+ + RP++
Sbjct: 735 LNLAHCYLEMREYGKAIENYELVLKKFDNEKTRPHI 770
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,312,768
Number of Sequences: 539616
Number of extensions: 5072918
Number of successful extensions: 27897
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 464
Number of HSP's that attempted gapping in prelim test: 27208
Number of HSP's gapped (non-prelim): 1094
length of query: 355
length of database: 191,569,459
effective HSP length: 118
effective length of query: 237
effective length of database: 127,894,771
effective search space: 30311060727
effective search space used: 30311060727
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)