BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040442
(522 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUB8|SKI22_ARATH F-box protein SKIP22 OS=Arabidopsis thaliana GN=SKIP22 PE=1 SV=1
Length = 475
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 191/553 (34%), Positives = 268/553 (48%), Gaps = 112/553 (20%)
Query: 1 MKLRLRSLENKETLRLEVPSSCTLHELGETLSQLISSSPSSLRFSLNRKDELHASSPPES 60
MKLRLR E +ETL+LE+ + TLH+L ++ + PSS+ SLNRKDEL SP ++
Sbjct: 1 MKLRLRHHETRETLKLELADADTLHDLRRRINPTV---PSSVHLSLNRKDELITPSPEDT 57
Query: 61 LHSLGVTAGDLIFYS-----------RDPYAFVSQTLESETQSVNKACTSRDNDEIPDGK 109
L SLG+ +GDLI++S RD SQ+ ES SV+ + + D +PD
Sbjct: 58 LRSLGLISGDLIYFSLEAGESSNWKLRDSETVASQS-ESNQTSVHDSIGFAEVDVVPD-- 114
Query: 110 LDKQEIPVLESVEIGVNLQESKSEEAVISQDCGIPDAMLDKQHYPVQESEKIEVSSVDSK 169
++KS +D P+ + P E ++V +D
Sbjct: 115 -------------------QAKSNPNTSVED---PEGDISGMEGP----EPMDVEQLD-- 146
Query: 170 EHMSKKETLEFLNTDTMEIDE-GSVVMPEPYFLRRVLGEKLGDRLGPHGLVIVAVHEILL 228
ME+ GS + EP+FL+ +L EK GD L + +VH ++L
Sbjct: 147 ----------------MELAAAGSKRLSEPFFLKNILLEKSGDTSELTTLAL-SVHAVML 189
Query: 229 ESGFVGFDSESGMRIDQFDLPDHLLLKGVSMSYTLPEILNDSSKDVTESVALKYQILGHF 288
ESGFV + S D+F+ LL VS+ YTLPE++ + ESV++K+Q LG
Sbjct: 190 ESGFVLLNHGS----DKFNFSKELLT--VSLRYTLPELIKSKDTNTIESVSVKFQNLGPV 243
Query: 289 VNIYGSLAKGDSGMHKLCLNAYNFGPILSLVWANSDQNCSLLEYKSFDCGKEVFEFWKNV 348
V +YG++ +H + L+ F P++ LV S + E S +EVF FW+ V
Sbjct: 244 VVVYGTVGGSSGRVH-MNLDKRRFVPVIDLVMDTSTSD----EEGSSSIYREVFMFWRMV 298
Query: 349 KDGLALPLLIDLCDKAGLCLPACWTHLPTELKLKLLECLPGVDVAKMECVSRDMRYLASN 408
KD L +PLLI +CDKAGL P C LPTELKLK+LE LPGV + M CV +MRYLAS+
Sbjct: 299 KDRLVIPLLIGICDKAGLEPPPCLMRLPTELKLKILELLPGVSIGNMACVCTEMRYLASD 358
Query: 409 NELWRQKFVEEFGG--PADAQGKTNWKERFVFNWEYNR--------------KRKRVITP 452
N+LW+QK +EE +A NWK RF W + R+ + T
Sbjct: 359 NDLWKQKCLEEVNNFVVTEAGDSVNWKARFATFWRQKQLAAASDTFWRQNQLGRRNISTG 418
Query: 453 APWFPYTRPYFPIIRDPPAPFGGNSLIQGGDYDRYPNIHFPPFPLGQRRQVFPPCIGRRN 512
+ R II DPP + + G +I P GQ + +GRR
Sbjct: 419 RSGIRFPR----IIGDPPFTWFNGDRMHG-------SIGIHP---GQSAR----GLGRRT 460
Query: 513 ----FAPNCNLGG 521
F P CNLGG
Sbjct: 461 WGQLFTPRCNLGG 473
>sp|Q9ZUB9|FB17_ARATH Putative F-box protein At1g23770 OS=Arabidopsis thaliana
GN=At1g23770 PE=4 SV=1
Length = 350
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 163/321 (50%), Gaps = 35/321 (10%)
Query: 195 MPEPYFLRRVLGEKLGDRLGPHGLVIVAVHEILLESGFVGFDSESGMRIDQFDLPDHLLL 254
+ EP+FL+ VL EK GD L + +VH ++LESGFV D S D+F LL
Sbjct: 43 LSEPFFLKNVLLEKSGDTSDLTALAL-SVHAVMLESGFVLLDHGS----DKFSFSKKLL- 96
Query: 255 KGVSMSYTLPEILNDSSKDVTESVALKYQILGHFVNIYGSLAKGDSGMHKLCLNAYNFGP 314
VS+ YTLPE++ + ESV +++Q +G + +YG+L +H L+ F P
Sbjct: 97 -SVSLRYTLPELITRKDTNTVESVTVRFQNIGPRLVVYGTLGGSCKRVHMTSLDKSRFLP 155
Query: 315 ILSLVWANSDQNCSLLEYKSFDCGKEVFEFWKNVKDGLALPLLIDLCDKAGLCLPACWTH 374
++ LV + S +EVF W+ VKD L +PLLI LCDKAGL P C
Sbjct: 156 VIDLVV----DTLKFEKQGSSSYYREVFMLWRMVKDELVIPLLIGLCDKAGLESPPCLML 211
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEFGGP--ADAQGKTNW 432
LPTELKLK+LE LPGV + M CV +MRYLAS+N+LW K +EE G G +W
Sbjct: 212 LPTELKLKILELLPGVSIGYMACVCTEMRYLASDNDLWEHKCLEEGKGCLWKLYTGDVDW 271
Query: 433 KERFVFNWEYNRKRKRVITPA---PWFPYTRPYFPII----RDPPAPFGGNSLIQGGDYD 485
K +F W +RKR+ A P + P FP + RD PF D
Sbjct: 272 KRKFASFW----RRKRLDLLARRNPPIKKSNPRFPTLFPDRRDRREPF-----------D 316
Query: 486 RYPNIHFPPFPLGQRRQVFPP 506
R+ F F L R F P
Sbjct: 317 RFGPSDFYRFGLRDPRDRFGP 337
>sp|O64600|FB81_ARATH F-box protein At1g70360 OS=Arabidopsis thaliana GN=At1g70360 PE=2
SV=1
Length = 174
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 31/192 (16%)
Query: 218 LVIVAVHEILLESGFVGFDSESGMRIDQFDLPDHLLLKGVSMSYTLPEILNDSSKDVTES 277
+VI+ VH ++LESGFV FD +S MR F L VS++YTLP S K +
Sbjct: 12 IVIMTVHAVMLESGFVLFDPDSSMR---FSFSKKTL---VSLNYTLP-----SVKGIVGL 60
Query: 278 VALKYQILGHFVNIYGSLAKGDSGMHKLCLNAYNFGPILSLVWAN--SDQNCSLLEYKSF 335
K I+G FV + ++ ++ I+ L+ SD+ L S
Sbjct: 61 NFEKEAIVGSFVRVVS-------------IDKRSYVHIVDLLMETLKSDEEEDTL---SI 104
Query: 336 DCGKEVFEFWKNVKDGLALPLLIDLCDKAGLCLPACWTHLPTELKLKLLECLPGVDVAKM 395
DC +V +W+ +KDG+ PLL+DLC K GL LP C+ LP ELK K+LE LPGVD+ +
Sbjct: 105 DC--KVLVWWRMIKDGIVTPLLVDLCYKTGLELPPCFISLPRELKHKILESLPGVDIGTL 162
Query: 396 ECVSRDMRYLAS 407
CVS ++R +AS
Sbjct: 163 ACVSSELRDMAS 174
>sp|Q2T9S7|FBX7_BOVIN F-box only protein 7 OS=Bos taurus GN=FBXO7 PE=2 SV=1
Length = 522
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 143/549 (26%), Positives = 232/549 (42%), Gaps = 87/549 (15%)
Query: 1 MKLRLRSLENKETLRLEVPS-SCTLHELGETLSQLIS----SSPSSLRFSLNRKDELHAS 55
MKLR+R K T L++P TL +L LSQ + SS + +LN KD L
Sbjct: 1 MKLRVRL--QKRTWPLDMPEVEPTLGQLRAYLSQALPTWGYSSDARFAITLNNKDALTGD 58
Query: 56 SPPESLHSLGVTAGDLIFYSRDPYAFVSQTLESETQSVNKACTSRDNDEIPDGKLDKQEI 115
E+L S G+ +GDL+ + A + L S T V++ + ++ND+
Sbjct: 59 E--ETLASYGIVSGDLLCLILED-AIAAPNLPSST--VSEHSSVQNNDQ----------- 102
Query: 116 PVLESVEIGVNLQESKSEEAVISQDCGIPDAMLDKQHYPVQESEKIEVSSV-DSKEHMSK 174
P L + N+Q+++ +++ Q D P Q E V V D +E
Sbjct: 103 PSLATSSSQSNIQDAQLHDSLQGQATQSEVWNDDSVSGPGQHFEAEAVPDVVDVEEGTGY 162
Query: 175 KETLEFLNTDTMEIDEGSVVMPEPYFLRRVLGEKLGDRLGPHGLVIVAVHEILLESGFVG 234
L ++++E G V P+ L + + D L P +IV++H ++LESG++
Sbjct: 163 YLAEPMLCSESVE---GQV----PHSLEILY--QSADCLNPCDALIVSIHLLMLESGYI- 212
Query: 235 FDSESGMRIDQFDLPDHLLLKGV-SMSYTLPEILNDSSKDVTESVALKYQILGHFVNIYG 293
G +P + L GV + YT P S+ AL LG+ + I
Sbjct: 213 ---PQGTEAKAVSMPQNWRLGGVYKLQYTHPLCEGGSA-------ALTCVPLGNLIVINA 262
Query: 294 SLAKGDS--GMHKLCLNAYNFGPILSLVWANSDQNCSLLEYKSFDCGKEVFEFWKNVKDG 351
+L + +L L +F + S +N +++ YK +F KD
Sbjct: 263 TLKINSEVRSVKRLQLLPESF-----ICKEESGENVAMI-YKDLQKLSRLF------KDQ 310
Query: 352 LALPLL------IDLCDKAGLCLPACWTHLPTELKLKLLECLPGVDVAKMECVSRDMRYL 405
L PLL ++L D GL + LP ELKL++ L V + V RD+
Sbjct: 311 LVYPLLAFTRQALNLPDVFGLVV------LPLELKLRIFRLLDVRSVLSLSAVCRDLCIT 364
Query: 406 ASNNELWRQKFVEEFGGPADAQGKTNWKERFVFNWEYNR--KRKRVITPAPWFPYTRPYF 463
+++ LWR ++ +F + T+WKE + ++ + +R R + P P+ P++
Sbjct: 365 SNDQLLWRCLYLRDFRDGSIRGRDTDWKELYKKRYKQRKEAQRGRHVMFLPSSPHPIPFY 424
Query: 464 PIIRDPPAPFGGNSL----IQGGDYDRYPNIHFPPFPL-------GQRRQVFPPCIGRRN 512
P P PF +SL I GG+YD+ + + P+ G+ FPP R
Sbjct: 425 PSPLH-PRPFPPSSLHPPGIIGGEYDQRLTLPYVGDPINSLIPGPGETPSQFPPL--RPR 481
Query: 513 FAPNCNLGG 521
F P L G
Sbjct: 482 FDPVGPLPG 490
>sp|Q68FS3|FBX7_RAT F-box only protein 7 OS=Rattus norvegicus GN=Fbxo7 PE=2 SV=1
Length = 522
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 135/528 (25%), Positives = 203/528 (38%), Gaps = 116/528 (21%)
Query: 1 MKLRLRSLENKETLRLEVPSS------CTLHELGETLSQLISSSPSSLRFSLNRKDELHA 54
MKLR+R K T LEVP S H + + L L SS + +LN KD L
Sbjct: 1 MKLRVRL--QKRTQPLEVPESEPTLGQLRAHLIQDLLPTLGFSSDTRFAITLNNKDALTG 58
Query: 55 SSPPESLHSLGVTAGDLIFYSRDPYAFVSQTLESETQSVNKACTSRDNDEIPDGKLDKQE 114
E+L S G+ +GDLI LE E + N +S D++ L +
Sbjct: 59 DE--ETLASYGIVSGDLICL----------VLEDEMPAPNLP-SSTDSEH---SSLQNND 102
Query: 115 IPVLESVEIGVNLQESKSEEAVISQDCGIPDAM-LDKQHYPVQESEKIEVSSVDSKEHMS 173
P L A S IPD D H V + + S++ H +
Sbjct: 103 QPPL----------------AATSSQANIPDEQGSDSSHGQVTQYDAWTDDSMEGPSHSA 146
Query: 174 KKETLEFLNTDTMEIDEGSVVMPEPYFLRRVLGEKLGDRLGPHGL--------------- 218
+ +++ D M ++E S P L +L + D PH L
Sbjct: 147 EAVSIQ----DAMSVEEASGFHP----LEPMLCSETEDGQVPHSLEALYQSAGCSTVSDA 198
Query: 219 VIVAVHEILLESGFVGFDSESGMRIDQFDLPDHLLLKGV-SMSYTLPEILNDSSKDVTES 277
+IV VH ++LESG++ G +P+ GV + YT P L + V
Sbjct: 199 LIVLVHLLMLESGYI----PQGTEAKAASMPEKWKSSGVYKLQYTHP--LCEGGSAVLTC 252
Query: 278 VALKYQILGHFVNIYGSLAKGDSGMHKLCLNAYNFGPILSLVWANSDQNCSLLEYKSFDC 337
V L G + I ++ K + G+ + + P + A ++ + + YK
Sbjct: 253 VPL-----GKLIMINATI-KVNGGIKNV--KSVQLKPGAYVRRAEPGESAAKV-YKDLKK 303
Query: 338 GKEVFEFWKNVKDGLALPLL------IDLCDKAGLCLPACWTHLPTELKLKLLECLPGVD 391
+F KD L PLL ++L D GL + LP ELKL++ L
Sbjct: 304 LSRLF------KDQLVYPLLAFTRQVLNLPDVFGLVV------LPLELKLRIFRLLDVHS 351
Query: 392 VAKMECVSRDMRYLASNNELWRQKFVEEFGGPADAQGKTNWKE----RFVFNWEYNRKRK 447
V + V D+ +++ LWR ++ +F T+WKE + + E R R
Sbjct: 352 VLALSAVCHDLLIASNDPLLWRCLYLRDFRDSTIRGPDTDWKELYRKKHIQRKEAQRMRH 411
Query: 448 RV----ITPAPWFP---YTRPYFPIIRDPPAPFGGNSLIQGGDYDRYP 488
+ + P P+ P Y RPY P PP I GG+YD P
Sbjct: 412 VMYLPSVHPIPFCPIPVYPRPYLPTTLLPPG-------IIGGEYDERP 452
>sp|Q3U7U3|FBX7_MOUSE F-box only protein 7 OS=Mus musculus GN=Fbxo7 PE=2 SV=2
Length = 523
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 204/515 (39%), Gaps = 89/515 (17%)
Query: 1 MKLRLRSLENKETLRLEVPSS-CTLHELGETLSQLIS-----SSPSSLRFSLNRKDELHA 54
MKLR+R K T LEVP S TL +L LSQ++ SS + +LN KD L
Sbjct: 1 MKLRVRL--QKRTQPLEVPESEPTLGQLRAHLSQVLLPTLGFSSDTRFAITLNNKDALTG 58
Query: 55 SSPPESLHSLGVTAGDLIFYSRD---PYAFVSQTLESETQSVNKACTSRDNDEIPDGKLD 111
E+L S G+ +GDLI + P + + ++E S+ +DND+
Sbjct: 59 DE--ETLASYGIVSGDLICLVLEDDMPAPNLPSSTDTEHSSL------QDNDQ------- 103
Query: 112 KQEIPVLESVEIGVNLQESKSEEAVISQDCGIPDAMLDKQHYPVQESEKIEVSSVDSKEH 171
P L + N+ + + ++ Q D P Q E + S E
Sbjct: 104 ----PSLAATPSQTNIPDEQGTDSSQGQATPFDAWTDDSMEGPSQNVEAESIQDAMSMEE 159
Query: 172 MSKKETLEFLNTDTMEIDEGSVVMPEPYFLRRVLGEKLGDRLGPHGLVIVAVHEILLESG 231
+S LE + + E ++G V + + D L IV VH ++LESG
Sbjct: 160 VSGFHPLEPMLCN--ETEDGQVPHSLETLYQSAGCSNISDAL------IVLVHLLMLESG 211
Query: 232 FVGFDSESGMRIDQFDLPDHLLLKGV-SMSYTLPEILNDSSKDVTESVALKYQILGHFVN 290
++ G +P+ GV + YT P L + V V LG+ +
Sbjct: 212 YI----PQGTETKAVTMPEKWKSSGVYKLQYTHP--LCEGGFAVLTCVP-----LGNLII 260
Query: 291 IYGSLAKGDSGMHKLCLNAYNFGPILSLVWANSDQNCSLLEYKSFDCGKEVFEFWKNVKD 350
I ++ K + G+ + G S V A + S + K++ + + KD
Sbjct: 261 INATI-KVNGGIKNVKSVQLQPG---SYVAAGVEPGES-----AAKVYKDLKKLSRLFKD 311
Query: 351 GLALPLL------IDLCDKAGLCLPACWTHLPTELKLKLLECLPGVDVAKMECVSRDMRY 404
L PLL ++L D GL + LP ELKL++ L V + V D+
Sbjct: 312 QLVYPLLAFTRQVLNLPDVFGLVV------LPLELKLRIFRLLDVHSVLALSAVCHDLLI 365
Query: 405 LASNNELWRQKFVEEFGGPADAQGKTNWKE----RFVFNWEYNRKRKRVITPA----PWF 456
+++ LWR ++ +F T+WKE + + E R R + P+ P+
Sbjct: 366 ASNDPLLWRCLYLRDFRDGTVRGPDTDWKELYRKKHIQRKEAQRMRHAMFLPSAHPIPFC 425
Query: 457 P---YTRPYFPIIRDPPAPFGGNSLIQGGDYDRYP 488
P Y R Y P PP I GG+YD P
Sbjct: 426 PIPVYPRAYLPTSLLPPG-------IIGGEYDERP 453
>sp|Q9Y3I1|FBX7_HUMAN F-box only protein 7 OS=Homo sapiens GN=FBXO7 PE=1 SV=1
Length = 522
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 229/568 (40%), Gaps = 125/568 (22%)
Query: 1 MKLRLRSLENKETLRLEVPSS-CTLHELGETLSQLI-----SSSPSSLRFSLNRKDELHA 54
M+LR+R L K T LEVP + TL L L Q + SS + +LN KD L
Sbjct: 1 MRLRVRLL--KRTWPLEVPETEPTLGHLRSHLRQSLLCTWGYSSNTRFTITLNYKDPLTG 58
Query: 55 SSPPESLHSLGVTAGDLIFYSRDPYAFVSQTLESETQSVNKACTSRDNDEIPDGKLDKQE 114
E+L S G+ +GDLI L+ + + N +S D++ L E
Sbjct: 59 DE--ETLASYGIVSGDLICL----------ILQDDIPAPNIP-SSTDSEH---SSLQNNE 102
Query: 115 IPVLESVEIGVNLQESKSEEAVISQ--DCGI--PDAMLDKQHYPVQESEKIEVSSVDSKE 170
P L + ++Q+ + ++ Q G+ D+ML S+ E S+
Sbjct: 103 QPSLATSSNQTSMQDEQPSDSFQGQAAQSGVWNDDSMLGP-------SQNFEAESIQDNA 155
Query: 171 HMSKKETLEFLNTDTMEIDEGSVVMPEPYFLRRVLGEKLGDRLGPHGLVIVAVHEILLES 230
HM+ E F ++ M E SV P+ L + + D + +IV +H ++LES
Sbjct: 156 HMA--EGTGFYPSEPMLCSE-SVEGQVPHSLETLY--QSADCSDANDALIVLIHLLMLES 210
Query: 231 GFVGFDSESGMRIDQFDLPDHLLLKGV-SMSYTLPEILNDSSKDVTESVALKYQILGHFV 289
G++ G +P+ L GV + Y P L + S S L LG+ +
Sbjct: 211 GYI----PQGTEAKALSMPEKWKLSGVYKLQYMHP--LCEGS-----SATLTCVPLGNLI 259
Query: 290 NIYGSLAKGDSGMHKLCLNAYNFGPILSLVWANSDQNCSLLEYKSFDC----GKEVFEFW 345
+ +L + S + LL +SF C G+ V +
Sbjct: 260 VVNATLKINNE--------------------IRSVKRLQLLP-ESFICKEKLGENVANIY 298
Query: 346 KNV-------KDGLALPLL------IDLCDKAGLCLPACWTHLPTELKLKLLECLPGVDV 392
K++ KD L PLL ++L D GL + LP ELKL++ L V
Sbjct: 299 KDLQKLSRLFKDQLVYPLLAFTRQALNLPDVFGLVV------LPLELKLRIFRLLDVRSV 352
Query: 393 AKMECVSRDMRYLASNNELWRQKFVEEFGGPADAQGKTNWKE----RFVFNWEYNRKRKR 448
+ V RD+ +++ LWR ++ +F T+WKE R + E + R
Sbjct: 353 LSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVRVQDTDWKELYRKRHIQRKESPKGRFV 412
Query: 449 VITPA-----PWFP---YTRPYFPIIRDPPAPFGGNSLIQGGDYDRYPNIHFPPFPL--- 497
++ P+ P++P + RP FP R PP I GG+YD+ P + + P+
Sbjct: 413 MLLPSSTHTIPFYPNPLHPRP-FPSSRLPPG-------IIGGEYDQRPTLPYVGDPISSL 464
Query: 498 ----GQRRQVFPPCIGRRNFAPNCNLGG 521
G+ FPP R F P L G
Sbjct: 465 IPGPGETPSQFPPL--RPRFDPVGPLPG 490
>sp|Q93794|SEL10_CAEEL F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans
GN=sel-10 PE=1 SV=3
Length = 587
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEF 420
LP EL +K+L L G D+ K+ VS++ + ++ +++W+ VEEF
Sbjct: 127 LPVELGMKILHNLTGYDLLKVAQVSKNWKLISEIDKIWKSLGVEEF 172
>sp|Q0D2D2|FBX31_XENTR F-box only protein 31 OS=Xenopus tropicalis GN=fbxo31 PE=2 SV=1
Length = 551
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 369 PACWTHLPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEFG 421
P HLP E+ +++ LPG ++ + V R R + + + +W+++ +E+G
Sbjct: 58 PRSLLHLPPEILVEIFSSLPGTELPSLAQVCRKFRQILTTDTIWKRRCKQEYG 110
>sp|Q9QZN0|FBX15_MOUSE F-box only protein 15 OS=Mus musculus GN=Fbxo15 PE=1 SV=2
Length = 433
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEF 420
+P+E+ +K+L L V + + CVSR +LA +N +W +K+ F
Sbjct: 1 MPSEILVKILSYLDAVTLVCIGCVSRRFYHLADDNLIWVRKYAAAF 46
>sp|Q9VZF4|FBXW7_DROME F-box/WD repeat-containing protein 7 OS=Drosophila melanogaster
GN=ago PE=1 SV=1
Length = 1326
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 22/90 (24%)
Query: 342 FEFWKNVKDGLALPLLIDLCDKAGLCLPACWTH----------------LPTELKLKLLE 385
F+ W +V+ LAL LID CD P+ H LP EL L +L
Sbjct: 852 FQRWSHVERLLALDRLIDHCD------PSQVRHMMKVIEPQFQRDFISLLPRELALFVLS 905
Query: 386 CLPGVDVAKMECVSRDMRYLASNNELWRQK 415
L D+ + R R+L +N LW++K
Sbjct: 906 YLEPKDLLRAAQTCRSWRFLCDDNLLWKEK 935
>sp|Q8NCQ5|FBX15_HUMAN F-box only protein 15 OS=Homo sapiens GN=FBXO15 PE=2 SV=2
Length = 510
Score = 36.2 bits (82), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEFGGPADAQGKTNWK 433
+P+E+ LK+ L V + CVSR +LA++N +W + F PA ++NWK
Sbjct: 77 MPSEILLKIFSYLDAVSLLCTGCVSRRFYHLANDNFIWIGIYSTAF-SPA----RSNWK 130
>sp|Q9GKV7|FBX15_MACFA F-box only protein 15 OS=Macaca fascicularis GN=FBXO15 PE=2 SV=1
Length = 434
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEFGGPADAQGKTNWK 433
+P+E+ LK+ L V + CVSR +LA++N +W + + F + ++NWK
Sbjct: 1 MPSEILLKIFSYLDAVSLLCAGCVSRRFYHLANDNFIWIRIYSTAF-----SPTRSNWK 54
>sp|A2BD94|FB31B_XENLA F-box only protein 31-B OS=Xenopus laevis GN=fbxo31-b PE=2 SV=1
Length = 523
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 29/53 (54%)
Query: 369 PACWTHLPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEFG 421
P LP E+ +++ LPG ++ + V R R + + + +W+++ +E+G
Sbjct: 59 PRSLLQLPPEILVEIFSSLPGTELPSLAQVCRKFRQILTTDTIWKRRCKQEYG 111
>sp|Q94AD8|FBW3_ARATH F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis
thaliana GN=At5g21040 PE=2 SV=1
Length = 539
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEFGGP----ADAQG-- 428
LP L ++L CL ++ + CVS + LAS + W++ + E +G P A + G
Sbjct: 71 LPQALISEILNCLDPKELGLVSCVSTYLHRLASEHHAWKEFYRERWGLPVVFGAASSGLS 130
Query: 429 -KTNWKERFV 437
+ +WK+ FV
Sbjct: 131 DERSWKDLFV 140
>sp|Q969H0|FBXW7_HUMAN F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1
SV=1
Length = 707
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 22/96 (22%)
Query: 340 EVFEFWKNVKDGLALPLLIDLCDKAGLCLPACWTH----------------LPTELKLKL 383
++F+ W + LAL LID C+ P H LP EL L +
Sbjct: 239 KMFQSWSGPEKLLALDELIDSCE------PTQVKHMMQVIEPQFQRDFISLLPKELALYV 292
Query: 384 LECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEE 419
L L D+ + R R LA +N LWR+K EE
Sbjct: 293 LSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 328
>sp|Q86I31|GACFF_DICDI Rho GTPase-activating protein gacFF OS=Dictyostelium discoideum
GN=gacFF PE=2 SV=1
Length = 885
Score = 34.3 bits (77), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEFGGPADAQGKT-NWK 433
LPT L L + L ++ + VS + LA +N LW +FV F PA K+ NWK
Sbjct: 354 LPTHLTLYVFSYLEPKELLILAQVSSQWQKLAGDNLLWV-RFVTHFITPASIFDKSHNWK 412
Query: 434 ERFVFN 439
++ N
Sbjct: 413 SVYLAN 418
>sp|P0C6P0|BCL8_HUMAN Putative protein BCL8 OS=Homo sapiens GN=NBEAP1 PE=5 SV=1
Length = 100
Score = 33.9 bits (76), Expect = 3.5, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 350 DGLA--LPLLIDLCDKAGLCLPACWTHLPTELKLKL 383
DGL+ +PLL LCD PA W H P +++L L
Sbjct: 27 DGLSHGVPLLKQLCDHILFINPAIWIHTPAKVQLSL 62
>sp|Q9M9E8|FB92_ARATH F-box protein At1g78280 OS=Arabidopsis thaliana GN=At1g78280 PE=2
SV=3
Length = 943
Score = 33.9 bits (76), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEEFGGPADAQGKTNWKE 434
LP E LLE L D+A + CVS M L + LW + GP + +G +WK+
Sbjct: 20 LPDETICVLLEYLAPRDIAHLACVSSVMYILCNEEPLWMSLCLRRAKGPLEYKG--SWKK 77
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD repeat-containing protein 7 OS=Mus musculus GN=Fbxw7 PE=1
SV=1
Length = 629
Score = 33.5 bits (75), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 22/96 (22%)
Query: 340 EVFEFWKNVKDGLALPLLIDLCDKAGLCLPACWTH----------------LPTELKLKL 383
++F+ W + LAL LID C+ P H LP EL L +
Sbjct: 161 KMFQSWSGPEKLLALDELIDSCE------PTQVKHMMQVIEPQFQRDFISLLPKELALYV 214
Query: 384 LECLPGVDVAKMECVSRDMRYLASNNELWRQKFVEE 419
L L D+ + R R LA +N LWR+K EE
Sbjct: 215 LSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 250
>sp|Q2G0L4|SDRD_STAA8 Serine-aspartate repeat-containing protein D OS=Staphylococcus
aureus (strain NCTC 8325) GN=sdrD PE=1 SV=1
Length = 1349
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 83 SQTLESETQSVNKACTSRDNDEIPDGKLDKQEIPVLESVEIGVNLQESKSEEAVISQ--- 139
++ ES + +N+A TS +++ D K+D Q++ + N + +E V SQ
Sbjct: 50 AKAAESTNKELNEATTSASDNQSSD-KVDMQQLNQED------NTKNDNQKEMVSSQGNE 102
Query: 140 DCGIPDAMLDKQHYPVQESEKIEVSSVDSKEHMSKKETLEFLNT 183
+ +++K+ K+EVS+ S E S K T E LNT
Sbjct: 103 TTSNGNKLIEKESVQSTTGNKVEVSTAKSDEQASPKSTNEDLNT 146
>sp|O86488|SDRD_STAAE Serine-aspartate repeat-containing protein D OS=Staphylococcus
aureus (strain Newman) GN=sdrD PE=1 SV=1
Length = 1315
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 83 SQTLESETQSVNKACTSRDNDEIPDGKLDKQEIPVLESVEIGVNLQESKSEEAVISQ--- 139
++ ES + +N+A TS +++ D K+D Q++ + N + +E V SQ
Sbjct: 50 AKAAESTNKELNEATTSASDNQSSD-KVDMQQLNQED------NTKNDNQKEMVSSQGNE 102
Query: 140 DCGIPDAMLDKQHYPVQESEKIEVSSVDSKEHMSKKETLEFLNT 183
+ +++K+ K+EVS+ S E S K T E LNT
Sbjct: 103 TTSNGNKLIEKESVQSTTGNKVEVSTAKSDEQASPKSTNEDLNT 146
>sp|Q5HIB3|SDRD_STAAC Serine-aspartate repeat-containing protein D OS=Staphylococcus
aureus (strain COL) GN=sdrD PE=3 SV=1
Length = 1381
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 83 SQTLESETQSVNKACTSRDNDEIPDGKLDKQEIPVLESVEIGVNLQESKSEEAVISQ--- 139
++ ES + +N+A TS +++ D K+D Q++ + N + +E V SQ
Sbjct: 50 AKAAESTNKELNEATTSASDNQSSD-KVDMQQLNQED------NTKNDNQKEMVSSQGNE 102
Query: 140 DCGIPDAMLDKQHYPVQESEKIEVSSVDSKEHMSKKETLEFLNT 183
+ +++K+ K+EVS+ S E S K T E LNT
Sbjct: 103 TTSNGNKLIEKESVQSTTGNKVEVSTAKSDEQASPKSTNEDLNT 146
>sp|Q2FJ78|SDRD_STAA3 Serine-aspartate repeat-containing protein D OS=Staphylococcus
aureus (strain USA300) GN=sdrD PE=3 SV=1
Length = 1381
Score = 33.1 bits (74), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 83 SQTLESETQSVNKACTSRDNDEIPDGKLDKQEIPVLESVEIGVNLQESKSEEAVISQ--- 139
++ ES + +N+A TS +++ D K+D Q++ + N + +E V SQ
Sbjct: 50 AKAAESTNKELNEATTSASDNQSSD-KVDMQQLNQED------NTKNDNQKEMVSSQGNE 102
Query: 140 DCGIPDAMLDKQHYPVQESEKIEVSSVDSKEHMSKKETLEFLNT 183
+ +++K+ K+EVS+ S E S K T E LNT
Sbjct: 103 TTSNGNKLIEKESVQSTTGNKVEVSTAKSDEQASPKSTNEDLNT 146
>sp|O81414|FBK79_ARATH Putative F-box/kelch-repeat protein At4g02310 OS=Arabidopsis
thaliana GN=At4g02310 PE=4 SV=1
Length = 349
Score = 33.1 bits (74), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLASNNEL-WRQKFVEEFGGPADAQGKTNWK 433
LP ++ L +L +P + CVS+++R+L S++EL + +E+ Q +N
Sbjct: 16 LPNDIVLNILARVPRWYHPILSCVSKNLRFLVSSSELKITRSLLEKDRFYVCFQEHSNSP 75
Query: 434 ERFVFNWEYNRKRKRVITPAPWFPYTRPYFPIIR-DPPAPFGGNS 477
++W + +R + P+ PYF + P F G S
Sbjct: 76 SLTTYHWFSFTENRRCLVSIPFTSPVEPYFATLTLGPEIYFVGKS 120
>sp|Q9WUW3|CFAI_RAT Complement factor I OS=Rattus norvegicus GN=Cfi PE=2 SV=1
Length = 604
Score = 32.7 bits (73), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 324 DQNCSLLEYKSFDCGKEVFEFWKNVKDGLALPLLIDLCDKAGLCLPACWTH---LPTELK 380
+Q C L Y C K + W+ +G L C KAG P C T+ PT
Sbjct: 33 EQKCLLKNYTHHSCDKVFCQPWQKCIEGTCACKLPYQCPKAG--TPVCATNGRGYPTYCH 90
Query: 381 LKLLECL 387
LK ECL
Sbjct: 91 LKSFECL 97
>sp|Q5XGG5|CCNF_XENTR Cyclin-F OS=Xenopus tropicalis GN=ccnf PE=2 SV=1
Length = 763
Score = 32.3 bits (72), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 375 LPTELKLKLLECLPGVDVAKMECVSRDMRYLA-SNNELW-RQKFVEEFGGP 423
LP ++ L +LECLP VD+ M V +R L S++ +W R F + + P
Sbjct: 34 LPEDVLLYVLECLPAVDILSMREVHPHLRSLVDSHSSVWARASFQDVWPSP 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,298,282
Number of Sequences: 539616
Number of extensions: 9569092
Number of successful extensions: 22185
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 22134
Number of HSP's gapped (non-prelim): 72
length of query: 522
length of database: 191,569,459
effective HSP length: 122
effective length of query: 400
effective length of database: 125,736,307
effective search space: 50294522800
effective search space used: 50294522800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)