Query 040445
Match_columns 358
No_of_seqs 146 out of 1190
Neff 6.9
Searched_HMMs 46136
Date Fri Mar 29 08:32:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040445.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040445hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02229 alpha-galactosidase 100.0 8.1E-97 2E-101 730.1 28.9 315 16-356 51-421 (427)
2 PLN02692 alpha-galactosidase 100.0 2E-96 4E-101 724.5 29.2 315 16-356 44-412 (412)
3 PLN02808 alpha-galactosidase 100.0 1.9E-96 4E-101 722.8 28.4 313 16-355 20-386 (386)
4 KOG2366 Alpha-D-galactosidase 100.0 4.3E-82 9.3E-87 603.7 16.8 314 17-356 22-413 (414)
5 PLN02899 alpha-galactosidase 100.0 1.6E-77 3.5E-82 606.7 25.9 322 17-354 20-632 (633)
6 PLN03231 putative alpha-galact 100.0 2.9E-71 6.3E-76 539.1 16.2 241 28-279 1-348 (357)
7 PF02065 Melibiase: Melibiase; 99.9 2E-27 4.4E-32 236.2 14.1 246 23-302 36-374 (394)
8 PLN02219 probable galactinol-- 99.9 2.4E-21 5.2E-26 201.0 21.0 319 25-357 191-656 (775)
9 PLN02355 probable galactinol-- 99.9 7.9E-21 1.7E-25 197.5 21.1 310 27-357 197-664 (758)
10 PLN02684 Probable galactinol-- 99.8 9.3E-20 2E-24 189.1 20.8 304 29-357 203-656 (750)
11 PF05691 Raffinose_syn: Raffin 99.8 1.1E-19 2.5E-24 189.9 18.8 315 29-358 196-671 (747)
12 PLN02711 Probable galactinol-- 99.8 1.6E-18 3.4E-23 180.3 19.4 315 29-357 214-686 (777)
13 PLN02982 galactinol-raffinose 99.6 6.6E-15 1.4E-19 153.4 17.1 231 118-358 469-772 (865)
14 COG3345 GalA Alpha-galactosida 99.6 5.7E-15 1.2E-19 148.3 8.3 125 26-174 290-488 (687)
15 cd06592 GH31_glucosidase_KIAA1 99.1 2.3E-09 5.1E-14 103.9 13.8 139 26-205 12-235 (303)
16 cd06589 GH31 The enzymes of gl 98.4 1.2E-05 2.7E-10 76.4 16.9 174 89-277 54-264 (265)
17 cd06593 GH31_xylosidase_YicI Y 98.2 2.1E-05 4.5E-10 76.3 13.9 110 89-207 56-237 (308)
18 PF01055 Glyco_hydro_31: Glyco 97.7 0.00033 7.1E-09 71.2 11.6 153 89-255 73-309 (441)
19 cd06598 GH31_transferase_CtsZ 97.6 0.00095 2.1E-08 65.2 13.6 153 88-255 59-289 (317)
20 cd06604 GH31_glucosidase_II_Ma 97.6 0.0015 3.2E-08 64.4 14.8 153 88-254 53-292 (339)
21 cd06601 GH31_lyase_GLase GLase 97.6 0.0025 5.3E-08 62.8 15.7 110 88-206 53-231 (332)
22 PRK10658 putative alpha-glucos 97.6 0.0017 3.6E-08 69.6 15.2 109 89-206 315-495 (665)
23 cd06600 GH31_MGAM-like This fa 97.6 0.0022 4.7E-08 62.7 14.7 153 88-254 53-270 (317)
24 cd06595 GH31_xylosidase_XylS-l 97.4 0.0027 6E-08 61.3 13.6 108 86-205 61-223 (292)
25 cd06599 GH31_glycosidase_Aec37 97.4 0.0021 4.5E-08 62.8 12.6 109 89-206 63-250 (317)
26 COG1501 Alpha-glucosidases, fa 97.4 0.0038 8.3E-08 67.8 15.3 154 30-206 266-493 (772)
27 cd06602 GH31_MGAM_SI_GAA This 97.4 0.0042 9E-08 61.3 14.0 110 88-206 53-231 (339)
28 cd06591 GH31_xylosidase_XylS X 97.3 0.0052 1.1E-07 60.1 13.7 109 89-206 56-243 (319)
29 cd06603 GH31_GANC_GANAB_alpha 96.9 0.021 4.7E-07 56.2 14.4 153 88-254 53-292 (339)
30 cd06594 GH31_glucosidase_YihQ 96.9 0.037 7.9E-07 54.2 15.4 151 90-255 62-295 (317)
31 PLN02763 hydrolase, hydrolyzin 96.8 0.025 5.4E-07 62.7 14.6 110 88-206 230-428 (978)
32 cd06597 GH31_transferase_CtsY 96.5 0.11 2.5E-06 51.2 15.9 79 120-206 165-263 (340)
33 cd06596 GH31_CPE1046 CPE1046 i 95.7 0.18 4E-06 47.8 12.2 139 101-254 76-224 (261)
34 PF02806 Alpha-amylase_C: Alph 95.4 0.1 2.2E-06 41.3 8.0 70 281-353 9-94 (95)
35 PF08533 Glyco_hydro_42C: Beta 94.8 0.045 9.7E-07 39.8 3.9 55 284-351 3-57 (58)
36 TIGR02456 treS_nterm trehalose 93.7 0.31 6.7E-06 51.1 9.0 67 283-352 470-538 (539)
37 PRK10426 alpha-glucosidase; Pr 93.6 1.2 2.6E-05 47.8 13.5 108 89-205 259-443 (635)
38 PF10566 Glyco_hydro_97: Glyco 92.9 0.32 7E-06 46.6 7.0 65 101-168 74-155 (273)
39 TIGR02455 TreS_stutzeri trehal 91.7 1.1 2.3E-05 47.9 9.7 73 283-355 610-684 (688)
40 PF10438 Cyc-maltodext_C: Cycl 91.4 0.68 1.5E-05 36.0 6.0 64 282-352 10-78 (78)
41 PF11941 DUF3459: Domain of un 88.5 1.5 3.4E-05 33.9 6.1 54 287-350 36-89 (89)
42 smart00632 Aamy_C Aamy_C domai 85.5 6.8 0.00015 30.2 8.2 60 283-350 10-76 (81)
43 PF14509 GH97_C: Glycosyl-hydr 84.8 7.2 0.00016 31.9 8.3 73 281-354 14-103 (103)
44 PF09260 DUF1966: Domain of un 81.9 5.5 0.00012 31.8 6.3 69 284-352 9-81 (91)
45 PF06964 Alpha-L-AF_C: Alpha-L 81.5 6.2 0.00013 34.9 7.3 28 291-318 102-129 (177)
46 KOG1065 Maltase glucoamylase a 71.8 42 0.00091 36.9 11.4 27 85-112 337-363 (805)
47 PF02055 Glyco_hydro_30: O-Gly 67.3 21 0.00046 37.2 7.9 73 264-351 404-494 (496)
48 PF07302 AroM: AroM protein; 60.5 32 0.0007 32.0 6.9 46 115-168 162-209 (221)
49 PF11852 DUF3372: Domain of un 54.6 16 0.00034 32.6 3.7 54 294-352 105-166 (168)
50 smart00813 Alpha-L-AF_C Alpha- 52.2 63 0.0014 28.8 7.4 26 293-318 115-141 (189)
51 PRK10785 maltodextrin glucosid 51.1 56 0.0012 34.9 7.8 57 283-343 540-597 (598)
52 PRK10933 trehalose-6-phosphate 44.9 87 0.0019 33.1 8.0 64 283-352 487-550 (551)
53 COG4288 Uncharacterized protei 41.5 75 0.0016 26.3 5.3 43 296-354 32-76 (124)
54 TIGR02403 trehalose_treC alpha 41.4 85 0.0018 33.1 7.3 63 283-352 481-543 (543)
55 COG3534 AbfA Alpha-L-arabinofu 37.6 80 0.0017 32.6 6.0 65 290-354 413-500 (501)
56 PRK12313 glycogen branching en 36.8 1.5E+02 0.0033 31.8 8.5 74 283-356 539-631 (633)
57 KOG2366 Alpha-D-galactosidase 36.0 28 0.0006 35.0 2.5 127 127-277 37-179 (414)
58 PRK09441 cytoplasmic alpha-amy 33.8 2E+02 0.0043 29.7 8.5 43 116-161 210-254 (479)
59 PF07718 Coatamer_beta_C: Coat 30.8 1E+02 0.0022 26.7 4.8 47 295-354 73-121 (140)
60 PRK05402 glycogen branching en 28.1 1.9E+02 0.0042 31.6 7.6 68 284-353 636-724 (726)
61 PRK14705 glycogen branching en 25.1 2.8E+02 0.0061 32.4 8.4 71 283-353 1135-1223(1224)
62 cd08205 RuBisCO_IV_RLP Ribulos 24.8 1.4E+02 0.0031 29.9 5.4 49 119-167 147-202 (367)
63 cd08210 RLP_RrRLP Ribulose bis 24.0 1.8E+02 0.004 29.1 6.0 51 117-167 140-197 (364)
64 TIGR03326 rubisco_III ribulose 23.8 2E+02 0.0043 29.4 6.3 51 118-168 160-217 (412)
65 cd08148 RuBisCO_large Ribulose 23.1 1.7E+02 0.0038 29.3 5.6 52 118-169 143-201 (366)
66 PF08141 SspH: Small acid-solu 22.6 1.1E+02 0.0025 22.3 3.2 51 264-316 6-56 (58)
67 PF01791 DeoC: DeoC/LacD famil 20.9 2.9E+02 0.0064 25.3 6.4 46 121-167 149-199 (236)
68 PF07100 ASRT: Anabaena sensor 20.9 2.2E+02 0.0048 24.0 4.9 18 296-313 30-47 (121)
No 1
>PLN02229 alpha-galactosidase
Probab=100.00 E-value=8.1e-97 Score=730.11 Aligned_cols=315 Identities=58% Similarity=1.030 Sum_probs=296.2
Q ss_pred ccccccCCCCCCCceeeeCcccccCChhhhHHHhc-------------------CcccccCCCCCcccccccccccchhh
Q 040445 16 RRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRDSQISLSCSFHMFDSLT 76 (358)
Q Consensus 16 ~~~~~~~~~a~~PpmGWnSW~~~~~~i~e~~i~~~-------------------DdgW~~~~rd~~~~~~~~~~~~~~~~ 76 (358)
....++||+++||||||||||+|+|+|||+.|+++ ||||+...||..
T Consensus 51 ~~~~~~ngla~tPpmGWnSWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~-------------- 116 (427)
T PLN02229 51 GRLQLNNGLARTPQMGWNSWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSK-------------- 116 (427)
T ss_pred hhhhccCCccCCCCceEEchhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCC--------------
Confidence 44567899999999999999999999999999998 999998767665
Q ss_pred hhccCCCCCCCCCceeecCCCCCCChHHHHHHHHHH------cC-----------CchhhHHHHHHHH-hhCccEEEeec
Q 040445 77 QIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHIL------IS-----------NSLDNRIESNIAF-EQGIDYLKYDN 138 (358)
Q Consensus 77 ~~~~~~~~~d~~G~~~~~~~~FP~Glk~l~d~ih~~------Y~-----------Gs~~~~~~da~~f-~WGvDylK~D~ 138 (358)
|+++||++|||+|||+|+||||+| |+ ||++||++||++| +|||||||+|+
T Consensus 117 ------------G~l~~d~~rFP~G~k~ladyiH~~GlKfGIy~d~G~~TC~~~pGS~g~e~~DA~~fA~WGVDylK~D~ 184 (427)
T PLN02229 117 ------------GQLVPDPKTFPSGIKLLADYVHSKGLKLGIYSDAGVFTCQVRPGSLFHEVDDADIFASWGVDYLKYDN 184 (427)
T ss_pred ------------CCEEEChhhcCCcHHHHHHHHHHCCCceEEeccCCCcccCCCCCCccHHHHHHHHHHHcCCCEEEecC
Confidence 999999999999999999999999 43 9999999999999 99999999999
Q ss_pred CCCCCCchhHHHHHHHHHHHHhCCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCCC
Q 040445 139 CFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGG 218 (358)
Q Consensus 139 c~~~~~~~~~~y~~m~~AL~~~gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~ 218 (358)
|+......+++|..|++||+++||||+||+|+||...|+.|..+++|+||++.||++.|.++.++++.+..|+.+++||+
T Consensus 185 C~~~~~~~~~~y~~m~~AL~~tGRpI~~SlC~WG~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~i~~~~~~~~~~agPG~ 264 (427)
T PLN02229 185 CYNLGIKPIERYPPMRDALNATGRSIFYSLCEWGVDDPALWAGKVGNSWRTTDDINDTWASMTTIADLNNKWAAYAGPGG 264 (427)
T ss_pred CCCCCcchhHHHHHHHHHHHhhCCCcEEEecCCCCCCHHHHHHhhcCeeeccCCcccccccHHHHHHHHHHHHhhcCCCC
Confidence 99876778899999999999999999999999999889999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhcc-----------C---CCeE
Q 040445 219 WNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQA-----------I---NDQQ 284 (358)
Q Consensus 219 wnDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQd-----------~---~~~~ 284 (358)
|||||||+||+.+||.+|+||||+||||++||||+|+||++|++++++||+|+|||||||| . +..+
T Consensus 265 wnDpDML~vGn~glT~~E~rthfsLWai~~SPLiiG~DL~~m~~~tl~ILtNkEVIAINQD~lG~qg~~v~~~~~~~~~~ 344 (427)
T PLN02229 265 WNDPDMLEVGNGGMTYEEYRGHFSIWALMKAPLLIGCDVRNMTAETMEILSNKEVIAVNQDPLGVQGRKIQANGKNGCQQ 344 (427)
T ss_pred CCCCCeeeeCCCCCCHHHHHHHHHHHHHHhCceeecCCcccCCHHHHHHhcCHHHHhhcccccccCcEEEEecCCCCceE
Confidence 9999999999999999999999999999999999999999999999999999999999999 1 2379
Q ss_pred EEEEEcCCCcEEEEEEeCCCCceEEEEEcccccccccc-----ccccCcccceeecceEEEEEcCCcEEEEEEeecc
Q 040445 285 IWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNN-----TLFEHRTLETKFQGKLTAKVDGHSCKMYELTPVT 356 (358)
Q Consensus 285 vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~-----DlW~g~~~~g~~~g~~~~~l~ph~~~llrl~~~~ 356 (358)
||+++|++|++||+|||+++++++++++|++|||++.. |||+++++++.++++|+++|+||+|+|||+++..
T Consensus 345 vW~~~L~~g~~aValfN~~~~~~~v~v~~~~lGl~~~~~~~VrDLW~~~dlg~~~~~~~~~~v~~Hg~~l~rl~~~~ 421 (427)
T PLN02229 345 VWAGPLSGDRLVVALWNRCSEPATITASWDVIGLESSISVSVRDLWKHKDLSENVVGSFGAQVDAHDCHMYIFTPQT 421 (427)
T ss_pred EEEEECCCCCEEEEEEeCCCCCEEEEEEHHHcCCCCCCceEEEECCCCCccCccccceEEEEECCCeEEEEEEeccc
Confidence 99999999999999999999999999999999997752 9999999844578899999999999999999863
No 2
>PLN02692 alpha-galactosidase
Probab=100.00 E-value=2e-96 Score=724.53 Aligned_cols=315 Identities=67% Similarity=1.209 Sum_probs=296.9
Q ss_pred ccccccCCCCCCCceeeeCcccccCChhhhHHHhc-------------------CcccccCCCCCcccccccccccchhh
Q 040445 16 RRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRDSQISLSCSFHMFDSLT 76 (358)
Q Consensus 16 ~~~~~~~~~a~~PpmGWnSW~~~~~~i~e~~i~~~-------------------DdgW~~~~rd~~~~~~~~~~~~~~~~ 76 (358)
+..+++||+|+||||||||||+|+|+|||+.|+++ ||||+...||..
T Consensus 44 ~~~~~~ngla~tPpmGWnSW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~-------------- 109 (412)
T PLN02692 44 RRNLLANGLGITPPMGWNSWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEK-------------- 109 (412)
T ss_pred hhhcccCcCcCCCcceEEchhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCC--------------
Confidence 55788999999999999999999999999999997 999998766665
Q ss_pred hhccCCCCCCCCCceeecCCCCCCChHHHHHHHHHH------cC------------CchhhHHHHHHHH-hhCccEEEee
Q 040445 77 QIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHIL------IS------------NSLDNRIESNIAF-EQGIDYLKYD 137 (358)
Q Consensus 77 ~~~~~~~~~d~~G~~~~~~~~FP~Glk~l~d~ih~~------Y~------------Gs~~~~~~da~~f-~WGvDylK~D 137 (358)
|+++|||+|||+|||+|+||||+| |+ ||++||++||++| +|||||||+|
T Consensus 110 ------------G~~~~d~~kFP~G~k~ladyiH~~GLKfGIy~d~G~~tC~~~~pGS~g~e~~DA~~fA~WGvDylK~D 177 (412)
T PLN02692 110 ------------GNLVPKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKTMPGSLGHEEQDAKTFASWGIDYLKYD 177 (412)
T ss_pred ------------CCeeeChhhcCCcHHHHHHHHHHCCCceEEEecCCccccCCCCCCchHHHHHHHHHHHhcCCCEEecc
Confidence 999999999999999999999999 32 8999999999999 9999999999
Q ss_pred cCCCCCCchhHHHHHHHHHHHHhCCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCC
Q 040445 138 NCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPG 217 (358)
Q Consensus 138 ~c~~~~~~~~~~y~~m~~AL~~~gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg 217 (358)
+|+.++..+.++|..|++||+++||||+||+|+||...|+.|..+++|+||++.||++.|.++..+++.+..++.+++||
T Consensus 178 ~C~~~~~~~~~~y~~m~~AL~~tGRpI~~SlC~wg~~~p~~w~~~~~n~WR~s~DI~d~W~sv~~~~~~~~~~~~~agPG 257 (412)
T PLN02692 178 NCNNDGSKPTVRYPVMTRALMKAGRPIFFSLCEWGDMHPALWGSKVGNSWRTTNDISDTWDSMISRADMNEVYAELARPG 257 (412)
T ss_pred ccCCCCcchhHHHHHHHHHHHHhCCCeEEEecCCCcCChhhhhhhcCCccccccccccchHhHHHHHHHHHHHhhccCCC
Confidence 99987666789999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhcc-----------CCCeEEE
Q 040445 218 GWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQA-----------INDQQIW 286 (358)
Q Consensus 218 ~wnDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQd-----------~~~~~vw 286 (358)
+|||||||+||+++||.+|+||||+||||++||||||+||++|++++++||+|+|||||||| .++.+||
T Consensus 258 ~wnDpDML~VGn~glT~~E~rThfsLWai~~SPLiiG~DL~~~~~~~l~iLtN~evIAiNQD~lG~q~~~v~~~~~~~vW 337 (412)
T PLN02692 258 GWNDPDMLEVGNGGMTKDEYIVHFSIWAISKAPLLLGCDVRNMTKETMDIVANKEVIAVNQDPLGVQAKKVRMEGDLEIW 337 (412)
T ss_pred CCCCCCeEeECCCCCCHHHHHHHHHHHHHHhCcceecCCcccCCHHHHHHhcCHHHhhhccCccccCcEEEEecCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 3568999
Q ss_pred EEEcCCCcEEEEEEeCCCCceEEEEEcccccccccc-----ccccCcccceeecceEEEEEcCCcEEEEEEeecc
Q 040445 287 AGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNN-----TLFEHRTLETKFQGKLTAKVDGHSCKMYELTPVT 356 (358)
Q Consensus 287 ~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~-----DlW~g~~~~g~~~g~~~~~l~ph~~~llrl~~~~ 356 (358)
+|+|++|++||+|||+++.+++++++|++||+.... |||+|++++..+++.|+++|+||+|+|||+++.+
T Consensus 338 ~k~l~~g~~aVal~N~~~~~~~i~~~~~~lgl~~~~~~~vrDLW~~~~~g~~~~~~~~~~v~~Hg~~l~rl~~~~ 412 (412)
T PLN02692 338 AGPLSGYRVALLLLNRGPWRNSITANWDDIGIPANSIVEARDLWEHKTLKQHFVGNLTATVDSHACKMYILKPIS 412 (412)
T ss_pred EEECCCCCEEEEEEECCCCCEEEEEeHHHhCCCCCCceEEEECCCCCccCccccceEEEEECCceEEEEEEecCC
Confidence 999999999999999999999999999999997642 9999999844578999999999999999999864
No 3
>PLN02808 alpha-galactosidase
Probab=100.00 E-value=1.9e-96 Score=722.82 Aligned_cols=313 Identities=58% Similarity=1.054 Sum_probs=296.4
Q ss_pred ccccccCCCCCCCceeeeCcccccCChhhhHHHhc-------------------CcccccCCCCCcccccccccccchhh
Q 040445 16 RRNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRET-------------------DDCWGESSRDSQISLSCSFHMFDSLT 76 (358)
Q Consensus 16 ~~~~~~~~~a~~PpmGWnSW~~~~~~i~e~~i~~~-------------------DdgW~~~~rd~~~~~~~~~~~~~~~~ 76 (358)
...+++||+++||||||||||+|+|+|||++|+++ ||||+...||..
T Consensus 20 ~~~~~~ngla~tPpmGWnsW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~-------------- 85 (386)
T PLN02808 20 SRNLLDNGLGLTPQMGWNSWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQ-------------- 85 (386)
T ss_pred hhhcccCcccCCCcceEEchHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCC--------------
Confidence 34577899999999999999999999999999987 999998777766
Q ss_pred hhccCCCCCCCCCceeecCCCCCCChHHHHHHHHHH------cC------------CchhhHHHHHHHH-hhCccEEEee
Q 040445 77 QIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHIL------IS------------NSLDNRIESNIAF-EQGIDYLKYD 137 (358)
Q Consensus 77 ~~~~~~~~~d~~G~~~~~~~~FP~Glk~l~d~ih~~------Y~------------Gs~~~~~~da~~f-~WGvDylK~D 137 (358)
|+++||++|||+|||+|+||||+| |+ ||++||++||++| +|||||||+|
T Consensus 86 ------------G~~~~d~~rFP~G~~~lad~iH~~GlkfGiy~~~G~~tC~~~~pGs~~~e~~DA~~fA~WGvDylK~D 153 (386)
T PLN02808 86 ------------GNLVPKASTFPSGIKALADYVHSKGLKLGIYSDAGTLTCSKTMPGSLGHEEQDAKTFASWGIDYLKYD 153 (386)
T ss_pred ------------CCEeeChhhcCccHHHHHHHHHHCCCceEEEecCCccccCCCCCcchHHHHHHHHHHHHhCCCEEeec
Confidence 999999999999999999999999 33 8999999999999 9999999999
Q ss_pred cCCCCCCchhHHHHHHHHHHHHhCCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCC
Q 040445 138 NCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPG 217 (358)
Q Consensus 138 ~c~~~~~~~~~~y~~m~~AL~~~gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg 217 (358)
+|+..+...+++|..|++||+++||||+||+|+||..+|+.|+.+++|+||++.||++.|.++.++++.+..++.+++||
T Consensus 154 ~C~~~~~~~~~~y~~m~~AL~~tGRpi~~slc~wg~~~p~~w~~~~~n~WR~s~Di~d~W~~v~~~~~~~~~~~~~agPG 233 (386)
T PLN02808 154 NCENTGTSPQERYPKMSKALLNSGRPIFFSLCEWGQEDPATWAGDIGNSWRTTGDIQDNWDSMTSRADQNDRWASYARPG 233 (386)
T ss_pred CcCCCCccHHHHHHHHHHHHHHhCCCeEEEecCCCCCCHHHHHHhhcCcccccCCcccchhhHHHHHHhhhhhHhhcCCC
Confidence 99987667889999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhcc-----------CCCeEEE
Q 040445 218 GWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQA-----------INDQQIW 286 (358)
Q Consensus 218 ~wnDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQd-----------~~~~~vw 286 (358)
+|||||||+||+++||.+|+||||+||||++||||||+||++|+++.++||+|+|||||||| +++.+||
T Consensus 234 ~wnDpDML~vGn~glt~~E~rthfsLWam~~SPLiiG~DL~~~~~~~l~iLtNkevIAINQD~lG~~~~~v~~~~~~~vW 313 (386)
T PLN02808 234 GWNDPDMLEVGNGGMTTEEYRSHFSIWALAKAPLLIGCDIRSMDNETFELLSNKEVIAVNQDKLGVQGKKVKKDGDLEVW 313 (386)
T ss_pred CCCCCCeeeECCCCCCHHHHHHHHHHHHHHhCcceecCCcCcCCHHHHHHhcCHHHHhhcCCccccCcEEEEecCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999 4568999
Q ss_pred EEEcCCCcEEEEEEeCCCCceEEEEEcccccccccc-----ccccCcccceeecceEEEEEcCCcEEEEEEeec
Q 040445 287 AGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNN-----TLFEHRTLETKFQGKLTAKVDGHSCKMYELTPV 355 (358)
Q Consensus 287 ~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~-----DlW~g~~~~g~~~g~~~~~l~ph~~~llrl~~~ 355 (358)
+|+|++|++||+|||+++++++++++|++|||.... |||+|+++ +.++++|+++|+||+|+||||++.
T Consensus 314 ~k~L~~g~~aVal~N~~~~~~~~~~~~~~lgl~~~~~~~vrDlWs~~~~-g~~~~~~~~~v~pHg~~~~rlt~~ 386 (386)
T PLN02808 314 AGPLSKKRVAVVLWNRGSSRATITARWSDIGLNSSAVVNARDLWAHSTQ-SSVKGQLSALVESHACKMYVLTPR 386 (386)
T ss_pred EEECCCCCEEEEEEECCCCCEEEEEEHHHhCCCCCCceEEEECCCCCcc-CcccceEEEEECCceEEEEEEeCC
Confidence 999999999999999999999999999999997542 99999998 788999999999999999999973
No 4
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-82 Score=603.66 Aligned_cols=314 Identities=46% Similarity=0.835 Sum_probs=290.8
Q ss_pred cccccCCCCCCCceeeeCcccccCChh----------hhHHHhc-------------------CcccccCCCCCcccccc
Q 040445 17 RNLLSNGLGLTPPMGWNSWNHFHCQIN----------EKIIRET-------------------DDCWGESSRDSQISLSC 67 (358)
Q Consensus 17 ~~~~~~~~a~~PpmGWnSW~~~~~~i~----------e~~i~~~-------------------DdgW~~~~rd~~~~~~~ 67 (358)
+..++||||++|||||+||+.|.|+|+ |+.++++ ||||.+..||++
T Consensus 22 ~~~l~NGLg~tP~MGw~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~----- 96 (414)
T KOG2366|consen 22 RMSLNNGLGRTPQMGWNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSD----- 96 (414)
T ss_pred heeeccccccCCCcccccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCc-----
Confidence 578999999999999999999999876 9888887 999999999998
Q ss_pred cccccchhhhhccCCCCCCCCCceeecCCCCCCChHHHHHHHHHH------cC-----------CchhhHHHHHHHH-hh
Q 040445 68 SFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYVHIL------IS-----------NSLDNRIESNIAF-EQ 129 (358)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~d~~G~~~~~~~~FP~Glk~l~d~ih~~------Y~-----------Gs~~~~~~da~~f-~W 129 (358)
|+++|+|+|||+||++|+||+|++ |+ ||++|+++||++| +|
T Consensus 97 ---------------------grLva~~~rFP~Gi~~ladyvHs~GLKlGiYsD~G~~TC~g~PGS~~~e~~DA~tFA~W 155 (414)
T KOG2366|consen 97 ---------------------GRLVADPSRFPSGIKALADYVHSKGLKLGIYSDAGNFTCAGYPGSLGHEESDAKTFADW 155 (414)
T ss_pred ---------------------cccccChhhcccchhhhhhchhhcCCceeeeeccCchhhccCCcccchhhhhhhhhHhh
Confidence 999999999999999999999999 32 9999999999999 99
Q ss_pred CccEEEeecCCCCCCchhHHHHHHHHHHHHhCCCcEEeecCCCCCCcccc-------cccccCEEeecCCCCCchHHHHH
Q 040445 130 GIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALW-------GSNIRNSWRTTDDISDSWARMLT 202 (358)
Q Consensus 130 GvDylK~D~c~~~~~~~~~~y~~m~~AL~~~gr~i~ls~c~wg~~~p~~w-------~~~~~~~wRis~Di~~~W~~~~~ 202 (358)
||||+|+|+|+.......++|..|++||+++||||+||+|+||..++..| ..+++|+||+.+||.++|.+|..
T Consensus 156 gvDylKlD~C~~~~~~~~~~Yp~ms~aLN~tGrpi~ySlC~W~~~~~~~~~~pny~~i~~~~N~WR~~dDI~dtW~Sv~~ 235 (414)
T KOG2366|consen 156 GVDYLKLDGCFNNLITMPEGYPIMSRALNNTGRPIFYSLCSWPAYHPGLPHHPNYKNISTICNSWRTTDDIQDTWKSVDS 235 (414)
T ss_pred CCcEEeccccccccccccccchhHHHHHhccCCceEEEeccCcccccCccCCCcchhhhhhhccccchhhhhhHHHHHHH
Confidence 99999999999987788999999999999999999999999998887766 68899999999999999999999
Q ss_pred HHH----HhcccccccCCCCCCCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhc
Q 040445 203 IAD----MNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQ 278 (358)
Q Consensus 203 ~~~----~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQ 278 (358)
++. .+..++.+++||+|||||||++||.|||.+|+++||++||++++||++|+|++.++++.++||+|||+|+|||
T Consensus 236 I~d~~~~nqd~~~~~agPg~WNDpDmL~iGN~G~s~e~y~~qf~lWai~kAPLlms~Dlr~is~~~~~il~nk~~IaiNQ 315 (414)
T KOG2366|consen 236 IIDYICWNQDRIAPLAGPGGWNDPDMLEIGNGGMSYEEYKGQFALWAILKAPLLMSNDLRLISKQTKEILQNKEVIAINQ 315 (414)
T ss_pred HHHHHhhhhhhhccccCCCCCCChhHhhcCCCCccHHHHHHHHHHHHHhhchhhhccchhhcCHHHHHHhcChhheeccC
Confidence 998 6788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-----------CCC-eEEEEEEcCCCcEEEEEEeCC--CCceEEE-EEcccccccccc-----ccccCcccceeecceE
Q 040445 279 A-----------IND-QQIWAGPLSGNRIVVLLESRK--TFSSMMT-AHWDDIGIKSNN-----TLFEHRTLETKFQGKL 338 (358)
Q Consensus 279 d-----------~~~-~~vw~~~l~dg~~av~l~N~~--~~~~~~t-v~l~~lGl~~~~-----DlW~g~~~~g~~~g~~ 338 (358)
| +++ ++||++|+++.++||+++|+. ..+++++ +.|.++|+.... |||++....+..++++
T Consensus 316 DplgiqGr~i~~e~~~ievw~~pls~~~~Ava~lNr~~~~~~~~It~~~l~~~g~~~~~~~~~~dLw~~~~~~~~~~~~i 395 (414)
T KOG2366|consen 316 DPLGIQGRKIVLEGDSIEVWSGPLSGKSVAVAFLNRRKTGIPARITAASLRELGLTNPASYTAHDLWSGVLGFLPTKDSI 395 (414)
T ss_pred CccchhheeeeecCCceEEEeeccCCceEEEEEecccCCCCCccccHHHHhhcCCCCCceeEeeehhhccccccccCCeE
Confidence 9 233 899999999999999999998 5678888 889999985544 9999953226678899
Q ss_pred EEEEcCCcEEEEEEeecc
Q 040445 339 TAKVDGHSCKMYELTPVT 356 (358)
Q Consensus 339 ~~~l~ph~~~llrl~~~~ 356 (358)
+++|+|||++||++.+..
T Consensus 396 ~~~V~phG~~l~~l~~~~ 413 (414)
T KOG2366|consen 396 SAQVNPHGVVLFVLHPSN 413 (414)
T ss_pred EEEECCCCcEEEEEEecc
Confidence 999999999999998864
No 5
>PLN02899 alpha-galactosidase
Probab=100.00 E-value=1.6e-77 Score=606.67 Aligned_cols=322 Identities=22% Similarity=0.375 Sum_probs=271.0
Q ss_pred cccccCCCCCCCceeeeCcccccCChhhhHHHhc------------------CcccccCCCCCcccccccccccchhhhh
Q 040445 17 RNLLSNGLGLTPPMGWNSWNHFHCQINEKIIRET------------------DDCWGESSRDSQISLSCSFHMFDSLTQI 78 (358)
Q Consensus 17 ~~~~~~~~a~~PpmGWnSW~~~~~~i~e~~i~~~------------------DdgW~~~~rd~~~~~~~~~~~~~~~~~~ 78 (358)
..+.++++|+||||||||||+|+|+|||++|+++ ||||+.+.|+..+ ..
T Consensus 20 ~~~~~~glA~TPPMGWNSWn~f~~~I~E~~i~~~Ad~vs~GLk~~GY~YVnIDDcW~~~~~~g~~-------------~~ 86 (633)
T PLN02899 20 GASSQQQLASFPPRGWNSYDSFSWIVSEEEFLQNAEIVSQRLLPFGYEYVVVDYLWYRKKVEGAY-------------VD 86 (633)
T ss_pred cccccCcccCCCCCCCcchhhhccCCCHHHHHHHHHHHHcchHhhCCeEEEEccccccccccccc-------------cc
Confidence 3567899999999999999999999999999998 9999876543220 00
Q ss_pred ccCCCCCCCCCceeecCCCCCC-----ChHHHHHHHHHH------cC--C--------------c---------------
Q 040445 79 AAKPLPNQCQGNLVANKTTFPS-----GTKALADYVHIL------IS--N--------------S--------------- 116 (358)
Q Consensus 79 ~~~~~~~d~~G~~~~~~~~FP~-----Glk~l~d~ih~~------Y~--G--------------s--------------- 116 (358)
...-..+|++|+++|||+|||+ |||+|+||||+| |. | +
T Consensus 87 s~g~~~~D~~GrLvPDp~RFPSs~~g~GmK~LADYVHskGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~~s~~~~~a 166 (633)
T PLN02899 87 SLGFDVIDEWGRPIPDPGRWPSSRGGKGFTEVAEKVHAMGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEESGRQWRA 166 (633)
T ss_pred cccccccCCCCCCccCcccCCCCccCCCcHHHHHHHHhCCcceEEEecCCCcccccccCCccccccccccccccccccch
Confidence 1112368999999999999998 999999999999 42 1 1
Q ss_pred ---------------------------hhhHHHHHHHH-hhCccEEEeecCCCCCCchhHHHHHHHHHHHHhCCCcEEee
Q 040445 117 ---------------------------LDNRIESNIAF-EQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSM 168 (358)
Q Consensus 117 ---------------------------~~~~~~da~~f-~WGvDylK~D~c~~~~~~~~~~y~~m~~AL~~~gr~i~ls~ 168 (358)
++|+++++++| +|||||||+|+|+.+. ...++|..|++||+++||||+||+
T Consensus 167 ~DIa~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla~tfAsWGVDyLKyD~c~~~~-~~~~ey~~ms~AL~aTGRPIvySL 245 (633)
T PLN02899 167 KDIALKERACAWMSHGFMSVNTKLGAGKAFLRSLYDQYAEWGVDFVKHDCVFGDD-FDLEEITYVSEVLKELDRPIVYSL 245 (633)
T ss_pred hhccccccccccCCCCcccccccccchhhhhHHHHHHHHHhCCCEEEEcCCCCCC-CChHHHHHHHHHHHHhCCCeEEEe
Confidence 45666778999 9999999999997643 345789999999999999999999
Q ss_pred cCCCCCCccccc---ccccCEEeecCCCCCchHHHHHHHHHhccccccc-------CCCCCCCCCcceeCC---------
Q 040445 169 CEWGDMRPALWG---SNIRNSWRTTDDISDSWARMLTIADMNEVYADHA-------KPGGWNDPDMLEVGN--------- 229 (358)
Q Consensus 169 c~wg~~~p~~w~---~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~-------~pg~wnDpDmL~vG~--------- 229 (358)
|++ ...++.|+ .+++|||||++||++.|.++..+++.+..|+.++ +||+|||||||+||+
T Consensus 246 spG-~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~~~~~~~~~~~g~~G~~gg~WNDpDML~VG~lg~~~~n~G 324 (633)
T PLN02899 246 SPG-TSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDVSRDFAAAGLIGAKGLRGRSWPDLDMLPLGWLTDPGSNVG 324 (633)
T ss_pred cCC-cccchhhhhhhhccCccceecCCcccchHHHHHHHHHHHHHhhccccccCCCCCCCCCCcceecccCCCccccccC
Confidence 974 34444443 5678999999999999999999988765554422 345899999999993
Q ss_pred ----CCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhcc--------------------------
Q 040445 230 ----GGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQA-------------------------- 279 (358)
Q Consensus 230 ----~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQd-------------------------- 279 (358)
.+||.+|+||||+||||++||||+|+||++|++++++||+|+|||||||+
T Consensus 325 ~~r~~~LT~dE~rThfSLWAm~aSPLiiG~DLr~md~~tl~ILTNkeVIAINQds~~n~~~~~~~~~~~~~~~~~~~~~~ 404 (633)
T PLN02899 325 PHRACNLTLDEQKTQMTLWAMAKSPLMYGGDLRKLDQATYSLITNPTLLEINSHSSNNMEFPYVTSTRRNKKKSHSQHST 404 (633)
T ss_pred ccccCCCCHHHHHHHHHHHHHHhCchhhcCCcccCCHHHHHHhcCHHHeEEccCccCCeeeeeEeccccccccccccccc
Confidence 25999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q 040445 280 -------------------------------------------------------------------------------- 279 (358)
Q Consensus 280 -------------------------------------------------------------------------------- 279 (358)
T Consensus 405 ~~~~~~~~~~~l~~c~~~~~~~w~~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (633)
T PLN02899 405 GVGKSDPSVLGLTSCKDSKANGWSIRSLDKDLDQICWNEKMGRRGEEPLCLYKTKPLLASDEEIIHNSEYQGKLHLLTSD 484 (633)
T ss_pred cCCCCCcceEEEEecCCCCCCceeEEecCCCcceeeccccccccCCCCeeeecccCCcccchhhhhcccccceEEeeecc
Confidence
Q ss_pred --------------------------------------------------------------CCCeEEEEEEcCCCcEEE
Q 040445 280 --------------------------------------------------------------INDQQIWAGPLSGNRIVV 297 (358)
Q Consensus 280 --------------------------------------------------------------~~~~~vw~~~l~dg~~av 297 (358)
.+.+.+|+..-++|.+||
T Consensus 485 ~~~~c~~~~~~~~~~~~~~~~~~fs~c~~~~~q~w~l~~~g~l~~~~sglca~v~~~~~~~~~~~~r~w~a~g~~g~~y~ 564 (633)
T PLN02899 485 GGELCLDASPKQKRTSKDFRSGSFSPCRWDANQMWELNNNGTLISSYSGLCATVNSVVAEVATGGVRSWIATGRKGEIYV 564 (633)
T ss_pred ccChhhccCCCCCcCHhHhhccccCCCCCChhhceeeCCCCCEecCccccceEeeccccccccCceeEEEEcCCCccEEE
Confidence 122478998888999999
Q ss_pred EEEeCCCCceEEEEEccccc--cccc--------c--ccccCcccceeecceEEEEEcCCcEEEEEEee
Q 040445 298 LLESRKTFSSMMTAHWDDIG--IKSN--------N--TLFEHRTLETKFQGKLTAKVDGHSCKMYELTP 354 (358)
Q Consensus 298 ~l~N~~~~~~~~tv~l~~lG--l~~~--------~--DlW~g~~~~g~~~g~~~~~l~ph~~~llrl~~ 354 (358)
+|||.+.+.++|++.+++|. +++. . |||+|+++ |..+++++..|+.|||+||.|+.
T Consensus 565 ~~fnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~e~w~~~~~-~~~~~~~~~~v~~hg~~~~~~~c 632 (633)
T PLN02899 565 AFFNLNQEKTKISAKISDLAKALPGSKNLRTSSCTGHEVWSGKDF-GVIKDSISATVEIHGCALFVLHC 632 (633)
T ss_pred EEEecCccceeEEEEhhHhHhhccccccccccccceEEeccCCCc-ccccccEEEEeecCceEEEEEeC
Confidence 99999999999999999984 3221 1 99999999 89999999999999999999874
No 6
>PLN03231 putative alpha-galactosidase; Provisional
Probab=100.00 E-value=2.9e-71 Score=539.08 Aligned_cols=241 Identities=26% Similarity=0.423 Sum_probs=202.8
Q ss_pred CceeeeCcccccCChhhhHHHhc------------------CcccccCCCCCcccccccccccchhhhhccCCCCCCCCC
Q 040445 28 PPMGWNSWNHFHCQINEKIIRET------------------DDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQG 89 (358)
Q Consensus 28 PpmGWnSW~~~~~~i~e~~i~~~------------------DdgW~~~~rd~~~~~~~~~~~~~~~~~~~~~~~~~d~~G 89 (358)
|||||||||+|+|+|||++|+++ ||||+.+.|.... .+.. ....-..+|++|
T Consensus 1 PpMGWNSWn~f~~~i~E~~i~~~Ad~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~------~~~~----~~~~~~~~d~~G 70 (357)
T PLN03231 1 PPRGWNSYDSFSFTISEEQFLENAKIVSETLKPHGYEYVVIDYLWYRKLKHGWF------KTSA----KSPGYDLIDKWG 70 (357)
T ss_pred CCCCccchhccCcCcCHHHHHHHHHHHHcchHHhCCEEEEECCccccccccccc------cccc----ccccccccCCCC
Confidence 89999999999999999999998 9999975432210 0000 000112578999
Q ss_pred ceeecCCCCCC-----ChHHHHHHHHHH------cC-------------------Cc-----------------------
Q 040445 90 NLVANKTTFPS-----GTKALADYVHIL------IS-------------------NS----------------------- 116 (358)
Q Consensus 90 ~~~~~~~~FP~-----Glk~l~d~ih~~------Y~-------------------Gs----------------------- 116 (358)
+++|||+|||+ |||+|+||||+| |+ ||
T Consensus 71 ~l~pd~~rFPs~~~~~G~k~lADyvHs~GLKfGIY~~~G~~tca~~~~~pi~G~~Gs~g~~~~a~Dia~~~~~c~~~~~~ 150 (357)
T PLN03231 71 RPLPDPKRWPSTTGGKGFAPIAAKVHALGLKLGIHVMRGISTTAVKKKTPILGAFKSNGHAWNAKDIALMDQACPWMQQC 150 (357)
T ss_pred CcccCcccCCCCccccCcHHHHHHHHhCCcceEEEecCCccchhcccCCccCCCCcccccccchhhhccccccccccccc
Confidence 99999999999 999999999999 42 23
Q ss_pred -----------hhhHHHHHHHH-hhCccEEEeecCCCCCCchhHHHHHHHHHHHHhCCCcEEeecCCCCCCcccc---cc
Q 040445 117 -----------LDNRIESNIAF-EQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRPIFFSMCEWGDMRPALW---GS 181 (358)
Q Consensus 117 -----------~~~~~~da~~f-~WGvDylK~D~c~~~~~~~~~~y~~m~~AL~~~gr~i~ls~c~wg~~~p~~w---~~ 181 (358)
|+|+++++++| +|||||||+|+|+.......++|..|++||+++||||+||+|++. ..+..| ..
T Consensus 151 ~~~v~~~~~gaq~y~~~~a~~fA~WGVDylK~D~c~~~~~~~~~~y~~m~~AL~~tGRpIv~Slc~g~-~~~~~~~~~i~ 229 (357)
T PLN03231 151 FVGVNTSSEGGKLFIQSLYDQYASWGIDFIKHDCVFGAENPQLDEILTVSKAIRNSGRPMIYSLSPGD-GATPGLAARVA 229 (357)
T ss_pred cccccccchhHHHHHHHHHHHHHHhCCCEEeecccCCCCcccHHHHHHHHHHHHHhCCCeEEEecCCC-CCCchhhhhhh
Confidence 34678999999 999999999999875556678999999999999999999999743 333333 35
Q ss_pred cccCEEeecCCCCCchHHHHHHHHHhcccc--------cccCCCCCCCCCcceeC-------------CCCCCchhhHHH
Q 040445 182 NIRNSWRTTDDISDSWARMLTIADMNEVYA--------DHAKPGGWNDPDMLEVG-------------NGGMKYNEYVVH 240 (358)
Q Consensus 182 ~~~~~wRis~Di~~~W~~~~~~~~~~~~~~--------~~~~pg~wnDpDmL~vG-------------~~~lt~~E~rt~ 240 (358)
+++|+|||+.||++.|.++.++++.+..++ .+++||+|||||||+|| +.+||.+|+|||
T Consensus 230 ~~an~WR~s~DI~d~W~~v~~~~~~~~~~~~~~~~~~~~~agpG~WnD~DML~vG~~g~~~~~~g~~~~~glT~~E~rth 309 (357)
T PLN03231 230 QLVNMYRVTGDDWDDWKYLVKHFDVARDFAAAGLIAIPSVVGGKSWVDLDMLPFGRLTDPAAAYGPYRNSRLSLEEKKTQ 309 (357)
T ss_pred hhcCcccccCCcccchhhHHHHHHHHHHHhhhcccccccCCCCCCCCCccchhcCCCCCCcccccccccCCCCHHHHHHH
Confidence 679999999999999999999887654333 36789999999999999 357999999999
Q ss_pred HHHHHHhcCCeeeccCCCCCCccccccccchhhHhhhcc
Q 040445 241 FSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVNQA 279 (358)
Q Consensus 241 ~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavnQd 279 (358)
||||||++||||+|+||++|++++++||+|+||||||||
T Consensus 310 fslWam~~SPLiiG~DL~~~~~~tl~iLtN~evIAINQD 348 (357)
T PLN03231 310 MTLWAVAKSPLMFGGDLRRLDNETLSLLTNPTVLEVNSH 348 (357)
T ss_pred HHHHHHHhCchhhcCCcccCCHHHHHHhcChHHheecCC
Confidence 999999999999999999999999999999999999999
No 7
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.95 E-value=2e-27 Score=236.23 Aligned_cols=246 Identities=26% Similarity=0.419 Sum_probs=154.4
Q ss_pred CCCCCCceeeeCcccccCChhhhHHHhc--------------CcccccCCCCCcccccccccccchhhhhccCCCCCCCC
Q 040445 23 GLGLTPPMGWNSWNHFHCQINEKIIRET--------------DDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQ 88 (358)
Q Consensus 23 ~~a~~PpmGWnSW~~~~~~i~e~~i~~~--------------DdgW~~~~rd~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 88 (358)
...++||||||||++++++|||+.|++. ||||+.. |+.+. +..
T Consensus 36 ~~~~~~pv~~nsW~~~~~d~~e~~i~~~a~~~~~~G~e~fviDDGW~~~-r~~d~----------------------~~~ 92 (394)
T PF02065_consen 36 WRDKPPPVGWNSWEAYYFDITEEKILELADAAAELGYEYFVIDDGWFGG-RDDDN----------------------AGL 92 (394)
T ss_dssp TTTSS--EEEESHHHHTTG--HHHHHHHHHHHHHHT-SEEEE-SSSBCT-ESTTT----------------------STT
T ss_pred cCCCCCceEEEcccccCcCCCHHHHHHHHHHHHHhCCEEEEEcCccccc-cCCCc----------------------ccC
Confidence 3578899999999999999999999987 9999985 44331 124
Q ss_pred CceeecCCCCCCChHHHHHHHHHH---cC--------------------------------------------CchhhHH
Q 040445 89 GNLVANKTTFPSGTKALADYVHIL---IS--------------------------------------------NSLDNRI 121 (358)
Q Consensus 89 G~~~~~~~~FP~Glk~l~d~ih~~---Y~--------------------------------------------Gs~~~~~ 121 (358)
|+|++|++|||+||++|+++||++ |+ ..++|..
T Consensus 93 GdW~~~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v~~~S~l~~~hPdw~l~~~~~~~~~~r~~~vLD~~~pev~~~l~ 172 (394)
T PF02065_consen 93 GDWEPDPKKFPNGLKPLADYIHSLGMKFGLWFEPEMVSPDSDLYREHPDWVLRDPGRPPTLGRNQYVLDLSNPEVRDYLF 172 (394)
T ss_dssp SBECBBTTTSTTHHHHHHHHHHHTT-EEEEEEETTEEESSSCHCCSSBGGBTCCTTSE-ECBTTBEEB-TTSHHHHHHHH
T ss_pred CceeEChhhhCCcHHHHHHHHHHCCCeEEEEeccccccchhHHHHhCccceeecCCCCCcCcccceEEcCCCHHHHHHHH
Confidence 999999999999999999999999 21 2356665
Q ss_pred HHHH-HH-hhCccEEEeecCCCCC------C-chhHHHH----HHHHHHHHhCCCcEEeecCCCCCC--cccccccccCE
Q 040445 122 ESNI-AF-EQGIDYLKYDNCFNDD------T-RPTIRYR----AMSDALKKAGRPIFFSMCEWGDMR--PALWGSNIRNS 186 (358)
Q Consensus 122 ~da~-~f-~WGvDylK~D~c~~~~------~-~~~~~y~----~m~~AL~~~gr~i~ls~c~wg~~~--p~~w~~~~~~~ 186 (358)
..+. .+ +|||||||+|++..-. . ....+|. .+.++|++..++++++.|++|... +.+. ...-..
T Consensus 173 ~~i~~ll~~~gidYiK~D~n~~~~~~~~~~~~~~~~~~~~~~y~l~~~L~~~~P~v~iE~CssGG~R~D~g~l-~~~~~~ 251 (394)
T PF02065_consen 173 EVIDRLLREWGIDYIKWDFNRDITEAGSPSLPEGYHRYVLGLYRLLDRLRARFPDVLIENCSSGGGRFDPGML-YYTPQS 251 (394)
T ss_dssp HHHHHHHHHTT-SEEEEE-TS-TTS-SSTTS-GHHHHHHHHHHHHHHHHHHHTTTSEEEE-BTTBTTTSHHHH-CCSSEE
T ss_pred HHHHHHHHhcCCCEEEeccccCCCCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCcEEEeccCCCCccccchh-eecccc
Confidence 5554 56 9999999999986421 1 1123333 477889999999999999998543 3221 223366
Q ss_pred EeecCCCCCchHHHHHHHHHhcccccccCCCCC--CCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeeccCCCCCCccc
Q 040445 187 WRTTDDISDSWARMLTIADMNEVYADHAKPGGW--NDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLGCDVGNLTAET 264 (358)
Q Consensus 187 wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~w--nDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~ 264 (358)
| ..|..+.+.++..+......++.-. .+.| .-|.. .+| +.++-+.|+++++| +.+.++-||++++++.
T Consensus 252 w--~SD~tda~~R~~iq~g~s~~~p~~~-~~~hv~~~p~~-~~~--r~~~l~~r~~~a~~----g~~g~e~dl~~ls~~e 321 (394)
T PF02065_consen 252 W--TSDNTDALERLRIQYGTSLFYPPEY-MGAHVSASPNH-QTG--RTTPLEFRAHVAMF----GRLGLELDLTKLSEEE 321 (394)
T ss_dssp E--SBST-SHHHHHHHHHHHCTTSSGGG-EEEEEEHSS-T-TTH--HHGGHHHHHHHHTC----SEEEEESTGCGS-HHH
T ss_pred c--cCCccchHHHhhhhcccccccCHHH-hCCeEEecccc-ccC--Ccccceechhhhhc----CCceeccCcccCCHHH
Confidence 6 7777888778776665544443211 1111 11111 122 24566777776543 7788999999999988
Q ss_pred cccccc-----hhhHhhhcc----------CCCeEEEEEEcCCCcEEEEEEeC
Q 040445 265 MPIIGN-----EEVIAVNQA----------INDQQIWAGPLSGNRIVVLLESR 302 (358)
Q Consensus 265 l~iL~N-----~eviavnQd----------~~~~~vw~~~l~dg~~av~l~N~ 302 (358)
++.++. |++..+-|. .++...|.-...+++.+|+++-.
T Consensus 322 ~~~~~~~ia~YK~~r~li~~G~~yrL~~p~~~~~~~~~~v~~d~~~av~~~~~ 374 (394)
T PF02065_consen 322 LAAVKEQIAFYKSIRPLIQSGDFYRLDSPDDSNWDAWQVVSPDKSEAVVFVFR 374 (394)
T ss_dssp HHHHHHHHHHHHHCHHHHHHSEEEECCTTCCHCEEEEEEE-TTSSEEEEEEEE
T ss_pred HHHHHHHHHHHHhHHHHhcCCcEEEecCCCccceEEEEEEcCCCCEEEEEEEE
Confidence 777653 233333333 22345666555666666665554
No 8
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=99.88 E-value=2.4e-21 Score=201.05 Aligned_cols=319 Identities=15% Similarity=0.135 Sum_probs=192.0
Q ss_pred CCCCc-----eeeeCcccccCChhhhHHHhc----------------CcccccCCCCCcccccccccccchhhhhccCCC
Q 040445 25 GLTPP-----MGWNSWNHFHCQINEKIIRET----------------DDCWGESSRDSQISLSCSFHMFDSLTQIAAKPL 83 (358)
Q Consensus 25 a~~Pp-----mGWnSW~~~~~~i~e~~i~~~----------------DdgW~~~~rd~~~~~~~~~~~~~~~~~~~~~~~ 83 (358)
-.+.| .||||||+|+.+|||+.|++. |||||....+.+ +... ..++..|.++.-.
T Consensus 191 ~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viIDDGwQsi~~~~~-~~~~---~~~~g~qf~~rL~ 266 (775)
T PLN02219 191 KKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLIIDDGWQQIENKEK-DENC---VVQEGAQFATRLT 266 (775)
T ss_pred cccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEccCccccccccc-cccc---cccccchhhhhhc
Confidence 44567 999999999999999999887 999998543321 0000 0001111111111
Q ss_pred CCCCCCceeecC--CCCCCChHHHHHHHHHHcC----------------------C------------------------
Q 040445 84 PNQCQGNLVANK--TTFPSGTKALADYVHILIS----------------------N------------------------ 115 (358)
Q Consensus 84 ~~d~~G~~~~~~--~~FP~Glk~l~d~ih~~Y~----------------------G------------------------ 115 (358)
.+.++-+++-+. ..||.|||++++.|+++|+ +
T Consensus 267 ~f~en~KF~~~~~~~~fp~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~spg~~~~~pd~ 346 (775)
T PLN02219 267 GIKENAKFQKNDQKNEQVSGLKHVVDDAKQRHNVKQVYVWHALAGYWGGVKPAAAGMEHYDSALAYPVQSPGVLGNQPDI 346 (775)
T ss_pred cccccccccccccccCCCCcHHHHHHHHHhccCCcEEEEeeeccceecCcCCCCcccccccccccccccCCCccccCcch
Confidence 122222222211 2599999999999998721 0
Q ss_pred -----------------chhhHHHHHHHH-hhCccEEEeecCCC------CCCchhHHHHHHHHHHHHh------CCCcE
Q 040445 116 -----------------SLDNRIESNIAF-EQGIDYLKYDNCFN------DDTRPTIRYRAMSDALKKA------GRPIF 165 (358)
Q Consensus 116 -----------------s~~~~~~da~~f-~WGvDylK~D~c~~------~~~~~~~~y~~m~~AL~~~------gr~i~ 165 (358)
.+.+|+.....+ +-|||+||+|.+.. +.....+..++..+||+++ ++.++
T Consensus 347 a~d~l~~~G~glV~P~~~~~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~ggrv~la~~y~~ALe~S~~r~F~~ng~I 426 (775)
T PLN02219 347 VMDSLSVHGLGLVNPKKVFNFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYQQALEASIARNFTDNGCI 426 (775)
T ss_pred hhhhhhhCCccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 113333344444 67999999999763 1111234444555666543 34455
Q ss_pred EeecCCCCCCcccccccccCEEeecCCCCCchHHHH-HHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhHHHHHHH
Q 040445 166 FSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARML-TIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIW 244 (358)
Q Consensus 166 ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~-~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~~tlw 244 (358)
-++|.. +...|..+.....|.|+|.++.+..-. .++-.++.-+.+.+.--|||.||++..++ -.+.|.+..
T Consensus 427 ~CMsh~---~d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~nAyNSLllg~~v~PDWDMFqS~Hp-----~A~~HAaaR 498 (775)
T PLN02219 427 SCMCHN---TDGLYSAKQTAVVRASDDFYPRDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHP-----AAEYHGAAR 498 (775)
T ss_pred EecccC---chhhhcccccceeecccccccCCCccCcchhhhhhhhhHHhccccccCchhceecCc-----cHHHHHHHH
Confidence 444432 123455677899999999998765311 11212222223345558999999997764 459999999
Q ss_pred HHhcCCeeeccCCCCCCccccccccch--hhHhhhcc--------------CC--CeEEEEEEcCCCcEEEEEEeCCCCc
Q 040445 245 AISKAPLLLGCDVGNLTAETMPIIGNE--EVIAVNQA--------------IN--DQQIWAGPLSGNRIVVLLESRKTFS 306 (358)
Q Consensus 245 ai~~sPLiig~Dl~~l~~~~l~iL~N~--eviavnQd--------------~~--~~~vw~~~l~dg~~av~l~N~~~~~ 306 (358)
||+|+|++|+|-+.+-+-+.+.-|.-+ .|++...- ++ -+-||... .+.-+|++||-....
T Consensus 499 AiSGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDclF~Dp~~dg~slLKIwn~n--~~~gviG~FNcqGag 576 (775)
T PLN02219 499 AVGGCAIYVSDKPGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKIWNVN--KCTGVVGVFNCQGAG 576 (775)
T ss_pred hhcCCcEEEecCCCCccHHHHHHhhCCCCceeccccCCCcchhhhccccCCCCceEEEEEEcc--cccceEEEEeccCCC
Confidence 999999999999887665554443322 33333311 11 15677743 344589999985432
Q ss_pred -----------------eEEEEEcccc-cccccc-ccccCcccc-----ee-----ecceEEEEEcCCcEEEEEEeeccC
Q 040445 307 -----------------SMMTAHWDDI-GIKSNN-TLFEHRTLE-----TK-----FQGKLTAKVDGHSCKMYELTPVTK 357 (358)
Q Consensus 307 -----------------~~~tv~l~~l-Gl~~~~-DlW~g~~~~-----g~-----~~g~~~~~l~ph~~~llrl~~~~~ 357 (358)
.+-.|...++ |+.... +-|+++.+. +. ....++++|+|-+.-+|.+.|...
T Consensus 577 W~~~~~~~~~~~~~~~~~s~~v~~~Dv~~i~~~a~~~w~~~~~vy~~~sg~l~~l~~~~~~~vtL~~~~~Ei~tv~Pv~~ 656 (775)
T PLN02219 577 WCKIEKKTRIHDTSPGTLTGSVCADDVDQIAQVAGEDWSGDSVVYAYKSGEVVRLPKGASIPVTLKVLEYELFHFCPLKE 656 (775)
T ss_pred CCchhhccccccCCCcceEEEEcchhccchhhccccCcCCCEEEEEeccCeEEEcCCCCceEEEecCCcEEEEEEeeEEE
Confidence 4555666666 443222 457666531 11 233567899999999999988754
No 9
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=99.87 E-value=7.9e-21 Score=197.53 Aligned_cols=310 Identities=15% Similarity=0.152 Sum_probs=187.0
Q ss_pred CCc-----eeeeCcccccCChhhhHHHhc----------------CcccccCCCCCcccccccccccchhhhhccCCCCC
Q 040445 27 TPP-----MGWNSWNHFHCQINEKIIRET----------------DDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPN 85 (358)
Q Consensus 27 ~Pp-----mGWnSW~~~~~~i~e~~i~~~----------------DdgW~~~~rd~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (358)
+.| .||||||+|+.+|||+.|+++ |||||....|..- ..+ ..++..|.++.-
T Consensus 197 ~~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~viIDDGwQs~~~d~~~-~~~---~~~~~~q~~~rL--- 269 (758)
T PLN02355 197 KMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKFVIIDDGWQSVGMDPTG-IEC---LADNSANFANRL--- 269 (758)
T ss_pred cCCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCCccEEEEecccccccccccc-ccc---cccccchhhhhh---
Confidence 567 999999999999999999987 9999985433320 000 001111111111
Q ss_pred CCCCceeecCCCCC-------------CChHHHHHHHHHHcC---------------C----------------------
Q 040445 86 QCQGNLVANKTTFP-------------SGTKALADYVHILIS---------------N---------------------- 115 (358)
Q Consensus 86 d~~G~~~~~~~~FP-------------~Glk~l~d~ih~~Y~---------------G---------------------- 115 (358)
-++.+|+ ||| .|||++++.|+++|+ |
T Consensus 270 ---~~f~~n~-KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~~~~~~p~~sp 345 (758)
T PLN02355 270 ---THIKENH-KFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYVWHAITGYWGGVKPGVAGMEHYESKMSYPVSSP 345 (758)
T ss_pred ---ccccccc-cccccccccccccCCCCcHHHHHHHHHhhcCCcEEEEeeeecceecCcCCCCcccccccccccccccCC
Confidence 2344444 555 699999999998711 0
Q ss_pred --------------------------chhhHHHHHHHH-hhCccEEEeecCCCC-----CC-chhHHHHHHHHHHHHh--
Q 040445 116 --------------------------SLDNRIESNIAF-EQGIDYLKYDNCFND-----DT-RPTIRYRAMSDALKKA-- 160 (358)
Q Consensus 116 --------------------------s~~~~~~da~~f-~WGvDylK~D~c~~~-----~~-~~~~~y~~m~~AL~~~-- 160 (358)
...+|+.....+ +-|||+||+|.+..- +. ...+..++..+||+++
T Consensus 346 Gv~~~~~~~a~d~i~~~G~glv~Pe~~~~FY~~~hsyL~s~GVDgVKVD~Q~~le~l~~g~ggrv~la~~y~~ALe~S~~ 425 (758)
T PLN02355 346 GVQSNEPCDALESITTNGLGLVNPEKVFSFYNELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASIA 425 (758)
T ss_pred cccccCcchhhhhcccCceeccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHHHhhcCCCcHHHHHHHHHHHHHHHHH
Confidence 012233333444 669999999997641 11 2233444555666543
Q ss_pred ----CCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHH-HHHHHhcccccccCCCCCCCCCcceeCCCCCCch
Q 040445 161 ----GRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARML-TIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYN 235 (358)
Q Consensus 161 ----gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~-~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~ 235 (358)
++.++-++|..+ ...+..+.....|.|+|.++.+.... -++-.++.-+.+.+..-|||.||+...++
T Consensus 426 r~F~~ngvI~CMs~~~---d~i~~~k~sav~R~SDDF~P~dP~sh~~Hi~~~AyNSLllg~~v~PDWDMF~S~hp----- 497 (758)
T PLN02355 426 RNFPDNGIISCMSHNT---DGLYSAKRTAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHP----- 497 (758)
T ss_pred HhCCCCceEEecccCc---hhhcccccceeeeeccccccCCCccCchhhhhhhhhhhhhccccccCcccceecCc-----
Confidence 455554444321 23455677899999999998776321 11222222233445568999999997664
Q ss_pred hhHHHHHHHHHhcCCeeeccCCCCCCccccccccch--hhHhhhcc--------------CCC--eEEEEEEcCCCcEEE
Q 040445 236 EYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNE--EVIAVNQA--------------IND--QQIWAGPLSGNRIVV 297 (358)
Q Consensus 236 E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~--eviavnQd--------------~~~--~~vw~~~l~dg~~av 297 (358)
-.+.|.+..||+|+|++|+|-+.+-+-+.+.-|.-+ .|++...- ++. +-||- +..+.-+|
T Consensus 498 ~A~~HAaaRAisGGPIYvSD~PG~hdf~LLk~LvlpdGsIlR~~~pg~PtrDclF~Dp~~dg~slLKIwn--~nk~sGvi 575 (758)
T PLN02355 498 MAEYHAAARAVGGCAIYVSDKPGQHDFNLLKKLVLPDGSILRAKLPGRPTRDCLFSDPARDGKSLLKIWN--LNEFTGVI 575 (758)
T ss_pred cHHHHHHHHhccCCcEEEecCCCCccHHHHHhhhCCCCceeccccCCCcchhhhccccccCCceEEEEEE--cCCcccEE
Confidence 468999999999999999999887665554444332 33333321 111 34665 44556689
Q ss_pred EEEeCCCCc-----------------eEEEEEcccccc-cccc-ccccCcccc-----ee-----ecceEEEEEcCCcEE
Q 040445 298 LLESRKTFS-----------------SMMTAHWDDIGI-KSNN-TLFEHRTLE-----TK-----FQGKLTAKVDGHSCK 348 (358)
Q Consensus 298 ~l~N~~~~~-----------------~~~tv~l~~lGl-~~~~-DlW~g~~~~-----g~-----~~g~~~~~l~ph~~~ 348 (358)
++||..... .+-.+.++++.. .... +-|.++.+. +. .+..++++|++-+..
T Consensus 576 G~FNcqGagw~~~~~~~~~~~~~~~~l~~~v~~~Dv~~~~~~a~~~w~~~~~vy~~~sg~l~~~~~~~~~~vtL~~~~~e 655 (758)
T PLN02355 576 GVFNCQGAGWCRVGKKNLIHDEQPGTITGVIRAKDVDYLPKVADDEWTGDSIVYSHLGGEVVYLPKDASLPVTLKSREYE 655 (758)
T ss_pred EEEeccCCcccchhccccccCCCCceeEEEEccccccchhhccccCCCCCeEEEEecCceEEecCCCCceEEEecCCceE
Confidence 999974322 223455555521 1111 346655431 11 144567999999999
Q ss_pred EEEEeeccC
Q 040445 349 MYELTPVTK 357 (358)
Q Consensus 349 llrl~~~~~ 357 (358)
||.+.|..+
T Consensus 656 iftv~Pi~~ 664 (758)
T PLN02355 656 VFTVVPVKE 664 (758)
T ss_pred EEEEeeEEE
Confidence 999998764
No 10
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=99.84 E-value=9.3e-20 Score=189.12 Aligned_cols=304 Identities=16% Similarity=0.136 Sum_probs=181.5
Q ss_pred ceeeeCcccccCChhhhHHHhc----------------CcccccCCCCCccc--ccccccccchhhhhccCCCCCCCCCc
Q 040445 29 PMGWNSWNHFHCQINEKIIRET----------------DDCWGESSRDSQIS--LSCSFHMFDSLTQIAAKPLPNQCQGN 90 (358)
Q Consensus 29 pmGWnSW~~~~~~i~e~~i~~~----------------DdgW~~~~rd~~~~--~~~~~~~~~~~~~~~~~~~~~d~~G~ 90 (358)
..|||||++||.+|||+.|++. |||||....+.+-. ...+..|.-.| -+
T Consensus 203 ~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vIIDDGwQs~~~d~~~~~~~~~~~q~~~rL-------------~~ 269 (750)
T PLN02684 203 YFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDDGWQSVGGDPTVEAGDEKKEQPLLRL-------------TG 269 (750)
T ss_pred eeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEecccccccccccccccccccchhhhhh-------------cc
Confidence 4799999999999999999987 99999865433200 00000111111 33
Q ss_pred eeecCCCCC------CChHHHHHHHHHHcC---------------C----------------------------------
Q 040445 91 LVANKTTFP------SGTKALADYVHILIS---------------N---------------------------------- 115 (358)
Q Consensus 91 ~~~~~~~FP------~Glk~l~d~ih~~Y~---------------G---------------------------------- 115 (358)
+..| .||| .|||++++.|+++|+ |
T Consensus 270 f~en-~KF~~~~~p~~Glk~~V~~iK~~~~vk~V~VWHAL~GYWGGv~P~~~~~~~Y~s~~~~p~~s~gv~~~~p~~~~d 348 (750)
T PLN02684 270 IKEN-EKFKKKDDPNVGIKNIVNIAKEKHGLKYVYVWHAITGYWGGVRPGVKEMEEYGSVMKYPNVSKGVVENDPTWKTD 348 (750)
T ss_pred Cccc-cccccccCCCccHHHHHHHHHhhcCCcEEEEEeeecccccccCCCCcchhhccccccccccCccccccCcccccc
Confidence 4555 5676 499999999998821 0
Q ss_pred --------------chhhHHHHHHHH-hhCccEEEeecCCC----C-CC-chhHHHHHHHHHHHHh------CCCcEEee
Q 040445 116 --------------SLDNRIESNIAF-EQGIDYLKYDNCFN----D-DT-RPTIRYRAMSDALKKA------GRPIFFSM 168 (358)
Q Consensus 116 --------------s~~~~~~da~~f-~WGvDylK~D~c~~----~-~~-~~~~~y~~m~~AL~~~------gr~i~ls~ 168 (358)
...+|+.....+ +-|||+||+|.+.. . +. ...+..++..+||+++ ++-++-++
T Consensus 349 ~l~~~g~glv~P~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~le~l~~~~ggrv~l~~ay~~ALe~S~~r~F~~ngvI~CM 428 (750)
T PLN02684 349 VMTLQGLGLVNPKKVYKFYNELHSYLADAGIDGVKVDVQCILETLGAGLGGRVELTRQYHQALDASVARNFPDNGCIACM 428 (750)
T ss_pred ccccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEChhhhHHHhhcccCcHHHHHHHHHHHHHHHHHHhCCCCCeEEec
Confidence 122333333444 66999999999763 1 11 1223334455666543 23344444
Q ss_pred cCCCCCCc-ccccccccCEEeecCCCCCchHHHH-HHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhHHHHHHHHH
Q 040445 169 CEWGDMRP-ALWGSNIRNSWRTTDDISDSWARML-TIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAI 246 (358)
Q Consensus 169 c~wg~~~p-~~w~~~~~~~wRis~Di~~~W~~~~-~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~~tlwai 246 (358)
|. .| ..|..+.....|.|+|.++.+..-. .++-.++.-+.+.+.--|||.||++..++ -.+.|.+..||
T Consensus 429 s~----~~d~i~~sk~sav~R~SDDF~p~dP~sh~~Hi~~~AyNSLllg~~v~PDWDMFqS~hp-----~A~~HAaaRAi 499 (750)
T PLN02684 429 SH----NTDALYCSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEFMQPDWDMFHSLHP-----AAEYHASARAI 499 (750)
T ss_pred cc----CchhhhcccccceeeeccccccCCCccchhhhhhhhhhhhhhccccccCcccceecCc-----cHHHHHHHHhh
Confidence 33 23 3466677899999999998765321 11222222233445568999999998765 45999999999
Q ss_pred hcCCeeeccCCCCCCccccccccch--hhHhhhcc--------------CC--CeEEEEEEcCCCcEEEEEEeCCCCceE
Q 040445 247 SKAPLLLGCDVGNLTAETMPIIGNE--EVIAVNQA--------------IN--DQQIWAGPLSGNRIVVLLESRKTFSSM 308 (358)
Q Consensus 247 ~~sPLiig~Dl~~l~~~~l~iL~N~--eviavnQd--------------~~--~~~vw~~~l~dg~~av~l~N~~~~~~~ 308 (358)
+|+|++|+|.+.+-+-+.+.-|.-+ .|++...- ++ -+-||-.. .+.-+|++||.......
T Consensus 500 sGGPIYvSD~PG~Hdf~LLk~LvlpDGsIlR~~~pg~PTrDcLF~DP~~dg~slLKIwn~n--~~tGViG~FNcqGagw~ 577 (750)
T PLN02684 500 SGGPLYVSDAPGKHNFELLKKLVLPDGSILRARLPGRPTRDCLFSDPARDGVSLLKIWNMN--KYTGVLGVYNCQGAAWS 577 (750)
T ss_pred cCCceEEecCCCCccHHHHHhhhCCCCcccccccCCccchhhhccCcccCCccEEEEEEec--CCCceEEEEeccCCccC
Confidence 9999999998887665554443322 23332211 11 14677654 34458999998542211
Q ss_pred -----------------EEEEccccc-ccccc--ccccCcccc-----ee-----ecceEEEEEcCCcEEEEEEeeccC
Q 040445 309 -----------------MTAHWDDIG-IKSNN--TLFEHRTLE-----TK-----FQGKLTAKVDGHSCKMYELTPVTK 357 (358)
Q Consensus 309 -----------------~tv~l~~lG-l~~~~--DlW~g~~~~-----g~-----~~g~~~~~l~ph~~~llrl~~~~~ 357 (358)
-++..+++- +.... +-|+++... +. ....++++|+|-+.-+|.+.|..+
T Consensus 578 ~~~~~~~~~~~~~~~~s~~v~~~Dv~~~~~~a~~~~w~~~~~vy~h~s~~l~~l~~~~~~~vtL~~~~~Ei~t~~Pv~~ 656 (750)
T PLN02684 578 STERKNIFHQTKTDSLTGSIRGRDVHLIAEAATDPNWNGDCAVYCHSRGELITMPYNASLPVSLKVLEHEIFTVTPIKH 656 (750)
T ss_pred ccccccccCCCCCccceeeecccccchhhhhccCCCCCCCEEEEEecCCeEEecCCCCceEEEecCCcEEEEEEeeEEE
Confidence 112222221 11000 238776542 11 233567899999999999988764
No 11
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=99.83 E-value=1.1e-19 Score=189.94 Aligned_cols=315 Identities=18% Similarity=0.217 Sum_probs=185.3
Q ss_pred ceeeeCcccccCChhhhHHHhc----------------CcccccCCCCCcc---cccccccccchhhhhccCCCCCCCCC
Q 040445 29 PMGWNSWNHFHCQINEKIIRET----------------DDCWGESSRDSQI---SLSCSFHMFDSLTQIAAKPLPNQCQG 89 (358)
Q Consensus 29 pmGWnSW~~~~~~i~e~~i~~~----------------DdgW~~~~rd~~~---~~~~~~~~~~~~~~~~~~~~~~d~~G 89 (358)
..|||||++|+.+|||+.|++. |||||.-.++.+- +.. ....+..|..+.-..++|+.
T Consensus 196 ~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viIDDGWQ~~~~~~~~~~~~~~---~~~~~g~q~~~rl~~~~en~ 272 (747)
T PF05691_consen 196 GLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIIDDGWQSVDNDGDDPSKDGM---NLVQEGAQFPRRLTDFKENS 272 (747)
T ss_pred hhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEecchhcccccCcccccccc---cccccccccchhhhhhhhhh
Confidence 4699999999999999999886 9999985544330 000 00000011111112233344
Q ss_pred ceeecC-----CCCCCChHHHHHHHHHHc-C------------------------------------C------------
Q 040445 90 NLVANK-----TTFPSGTKALADYVHILI-S------------------------------------N------------ 115 (358)
Q Consensus 90 ~~~~~~-----~~FP~Glk~l~d~ih~~Y-~------------------------------------G------------ 115 (358)
++..+. +.||+|||.+++.|+++| + |
T Consensus 273 kF~~~~~~~~~~~~~~GL~~~V~~ik~~~~~Ik~V~VWHAL~GYWgGi~P~~~~~~~~k~~~~~~spg~~~~~~d~~~d~ 352 (747)
T PF05691_consen 273 KFRAYKSGKSPEAFPSGLKHFVSDIKEKFPGIKYVYVWHALCGYWGGISPDGMLAYNYKLVYPKLSPGLQGNMPDLAVDS 352 (747)
T ss_pred hhhhccCCCcccCCcccHHHHHHHHHhhCCCCCEEEEeehhcceecCcCCCCccccccceeecccCCcccccCccccccc
Confidence 444333 469999999999999994 1 0
Q ss_pred -------------chhhHHHHHHHH-hhCccEEEeecCCCC-----CC-chhHHHHHHHHHHHH----h--CCCcEEeec
Q 040445 116 -------------SLDNRIESNIAF-EQGIDYLKYDNCFND-----DT-RPTIRYRAMSDALKK----A--GRPIFFSMC 169 (358)
Q Consensus 116 -------------s~~~~~~da~~f-~WGvDylK~D~c~~~-----~~-~~~~~y~~m~~AL~~----~--gr~i~ls~c 169 (358)
.+.+|+.....+ +-|||+||+|.+..- +. ...+..+++.+||++ . ++.++-++|
T Consensus 353 ~~~~g~glv~p~~~~~FYd~~hsyL~s~GVDgVKVD~Q~~l~~l~~~~ggrv~la~ay~~AL~~S~~r~F~~~~vI~CMs 432 (747)
T PF05691_consen 353 IVKGGLGLVDPEDAFRFYDDFHSYLASAGVDGVKVDVQAILETLGEGYGGRVELARAYQDALEASVARHFSGNGVINCMS 432 (747)
T ss_pred cccCcccccCHHHHHHHHHHHHHHHHHcCCCEEEEchhhhhhhhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEEecC
Confidence 122344444444 679999999997641 11 123333444555543 2 445666555
Q ss_pred CCCCCCccccc-ccccCEEeecCCCCCchH----------HHHHHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhH
Q 040445 170 EWGDMRPALWG-SNIRNSWRTTDDISDSWA----------RMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYV 238 (358)
Q Consensus 170 ~wg~~~p~~w~-~~~~~~wRis~Di~~~W~----------~~~~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~r 238 (358)
..+ ...|. .+.....|+|+|..+.+. ....++ .++.-+.+.+...|+|.||+..-++ -.+
T Consensus 433 h~~---~~l~~~~~~~av~R~SDDF~P~~p~s~p~g~~w~h~~Hi~-~nAyNsL~~g~~~~PDwDMF~S~h~-----~A~ 503 (747)
T PF05691_consen 433 HNP---DNLYHSTKQSAVVRNSDDFFPRDPASDPNGVFWLHTWHIA-HNAYNSLLLGQFVWPDWDMFQSSHP-----AAE 503 (747)
T ss_pred CCc---cchhcccccccceeccccccCCCCCCCccccchhhHHHHH-HHHHHHHHHHhhcCCCcccccccCc-----cHH
Confidence 421 12344 455678999999987644 222233 2222223345568999999997653 578
Q ss_pred HHHHHHHHhcCCeeeccCCCCCCccccccc--cchhhHhhhcc--------------CC--CeEEEEEEcCCCcEEEEEE
Q 040445 239 VHFSIWAISKAPLLLGCDVGNLTAETMPII--GNEEVIAVNQA--------------IN--DQQIWAGPLSGNRIVVLLE 300 (358)
Q Consensus 239 t~~tlwai~~sPLiig~Dl~~l~~~~l~iL--~N~eviavnQd--------------~~--~~~vw~~~l~dg~~av~l~ 300 (358)
.|.++.||+|+|++|+|.+.+-+-+.++-| .+-.|++...- ++ -+-||...-. .-+|++|
T Consensus 504 ~HAaaRaiSGGPVYiSD~pG~hd~~LLk~LvlpDG~ilR~~~pg~Pt~d~Lf~dp~~d~~~lLKi~n~n~~--~gvig~F 581 (747)
T PF05691_consen 504 FHAAARAISGGPVYISDKPGKHDFDLLKKLVLPDGSILRADHPGRPTRDCLFEDPLRDGKSLLKIWNLNKF--TGVIGVF 581 (747)
T ss_pred HHHHHHhhcCCCEEEeeCCCCCCHHHHHHhhCCCCceeccccCCCCChhhhcccCCCCCceeEEEEecCCc--cceEEEE
Confidence 899999999999999999987665554433 33345544433 11 1456664333 3479999
Q ss_pred eCCC---------------CceEEE--EEccccc-cc---cccccccCc---------ccceee---cceEEEEEcCCcE
Q 040445 301 SRKT---------------FSSMMT--AHWDDIG-IK---SNNTLFEHR---------TLETKF---QGKLTAKVDGHSC 347 (358)
Q Consensus 301 N~~~---------------~~~~~t--v~l~~lG-l~---~~~DlW~g~---------~~~g~~---~g~~~~~l~ph~~ 347 (358)
|... .+.++| +.-.++- +. +..+-|.++ ++ ... ...+.++|+|-..
T Consensus 582 N~qgagw~~~~~~~~~~~~~~~~~t~~v~~~Dv~~~~~~~~~~~~~~~~~avY~~~~~~l-~~l~~k~~~~~vtL~~~~~ 660 (747)
T PF05691_consen 582 NCQGAGWCREERKNKSHDECPGTLTGSVRPSDVEWISEVAGADDGWNGDFAVYSHRSGEL-VLLPPKSESLPVTLKPLEF 660 (747)
T ss_pred ecCCCcccchhhhccccCCCCcceEeeccccccceeccccccCcCCCccEEEEEcCCCeE-EEecCCCCCceEEEcCcce
Confidence 9742 122233 3333431 11 101223332 22 112 3467899999999
Q ss_pred EEEEEeeccCC
Q 040445 348 KMYELTPVTKL 358 (358)
Q Consensus 348 ~llrl~~~~~~ 358 (358)
-||.++|..+|
T Consensus 661 El~tv~Pv~~~ 671 (747)
T PF05691_consen 661 ELFTVSPVKVL 671 (747)
T ss_pred EEEEEeeEEEe
Confidence 99999997653
No 12
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=99.80 E-value=1.6e-18 Score=180.27 Aligned_cols=315 Identities=17% Similarity=0.117 Sum_probs=179.1
Q ss_pred ceeeeCcccccCChhhhHHHhc----------------CcccccCCCCCcc----cccccccccchhhhhccCCCCCCCC
Q 040445 29 PMGWNSWNHFHCQINEKIIRET----------------DDCWGESSRDSQI----SLSCSFHMFDSLTQIAAKPLPNQCQ 88 (358)
Q Consensus 29 pmGWnSW~~~~~~i~e~~i~~~----------------DdgW~~~~rd~~~----~~~~~~~~~~~~~~~~~~~~~~d~~ 88 (358)
..|||||++||.+|||+.|++. |||||.-..+.+- ++.. -..+..|.+..-..+.|+
T Consensus 214 ~fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~vIIDDGWQsi~~d~~~~~~~~~~~---~~~~g~q~~~rL~~f~en 290 (777)
T PLN02711 214 KFGWCTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLVLIDDGWQSICHDEDPISDQEGMN---RTVAGEQMPCRLLKFEEN 290 (777)
T ss_pred cceEEehhHhcccCCHHHHHHHHHHHHhCCCCccEEEEcCCcccccccCcccccccccc---cccccchhhhhhcccccc
Confidence 4699999999999999999886 9999974322110 0000 000000111000111111
Q ss_pred Cce---eecCCCCCCChHHHHHHHHHHcC----------------C----------------------------------
Q 040445 89 GNL---VANKTTFPSGTKALADYVHILIS----------------N---------------------------------- 115 (358)
Q Consensus 89 G~~---~~~~~~FP~Glk~l~d~ih~~Y~----------------G---------------------------------- 115 (358)
.++ ..++..||.|||.+++.|+++|. |
T Consensus 291 ~KF~~~~~~~~~~p~Glk~~v~~iK~~~~~vk~VyVWHAL~GYWGGv~P~~~~~~~~~~~~p~~spg~~~~~~d~~~d~~ 370 (777)
T PLN02711 291 YKFRDYVSPKSLSNKGMGAFIRDLKEEFKTVDYVYVWHALCGYWGGLRPNVPGLPESKVVAPKLSPGLKMTMEDLAVDKI 370 (777)
T ss_pred ccccccccccCCCCCcHHHHHHHHHhhCCCCCEEEEeeeccCcccCcCCCCCCCccceeeccccCccccccccccccccc
Confidence 111 11255689999999999999831 1
Q ss_pred ------------chhhHHHHHHHH-hhCccEEEeecCCC----C-CC-chhHHHHHHHHHHHHh------CCCcEEeecC
Q 040445 116 ------------SLDNRIESNIAF-EQGIDYLKYDNCFN----D-DT-RPTIRYRAMSDALKKA------GRPIFFSMCE 170 (358)
Q Consensus 116 ------------s~~~~~~da~~f-~WGvDylK~D~c~~----~-~~-~~~~~y~~m~~AL~~~------gr~i~ls~c~ 170 (358)
...+|+.....+ +-|||+||+|.+.. . .. ...+..++..+||+++ ++-++-++|.
T Consensus 371 ~~~g~glv~Pe~~~~FY~~~hs~Las~GVDgVKVDvQ~~Le~l~~~~Ggrv~la~ay~~ALe~S~~r~F~~ng~I~CMs~ 450 (777)
T PLN02711 371 VNNGVGLVPPELAYQMYEGLHSHLQSVGIDGVKVDVIHLLEMLCEEYGGRVELAKAYYKALTASVRKHFNGNGVIASMEH 450 (777)
T ss_pred ccCcccccCHHHHHHHHHHHHHHHHHcCCCeEEEchhhhHhhhcccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeeccc
Confidence 122333344444 67999999998754 1 11 1233444555555442 3445544443
Q ss_pred CCCCCcc-cc-cccccCEEeecCCCCCchHHH---------HHHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhHH
Q 040445 171 WGDMRPA-LW-GSNIRNSWRTTDDISDSWARM---------LTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVV 239 (358)
Q Consensus 171 wg~~~p~-~w-~~~~~~~wRis~Di~~~W~~~---------~~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt 239 (358)
.+. .+ ..+....-|.|+|.++.-..- ..++..++.-+.+.+.--|||.||+...++ -.+.
T Consensus 451 ----~~d~~~~~tk~~av~R~SDDF~p~dP~sh~~g~~W~~~~Hi~~~AyNSLllg~~v~PDWDMF~S~Hp-----~A~~ 521 (777)
T PLN02711 451 ----CNDFMFLGTEAISLGRVGDDFWCTDPSGDPNGTFWLQGCHMVHCAYNSLWMGNFIHPDWDMFQSTHP-----CAEF 521 (777)
T ss_pred ----CchhhhccCcccceeeecccccCCCCccccccccccccceeeeehhhhhhhcccccCCchhhhccCc-----hHHH
Confidence 221 11 234557889999988542210 011111222223345568999999997764 6689
Q ss_pred HHHHHHHhcCCeeeccCCCCCCccccccccch--hhHhhhcc--------------CCC--eEEEEEEcCCCcEEEEEEe
Q 040445 240 HFSIWAISKAPLLLGCDVGNLTAETMPIIGNE--EVIAVNQA--------------IND--QQIWAGPLSGNRIVVLLES 301 (358)
Q Consensus 240 ~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~--eviavnQd--------------~~~--~~vw~~~l~dg~~av~l~N 301 (358)
|.+..||+|+|++|+|-+.+-+-+.+.-|.-+ .|++...- ++. +-||-..- +.-+|++||
T Consensus 522 HAaaRAisGGPIYVSD~pG~Hdf~LLk~LvlpdGsIlR~~~pg~PtrDcLF~DP~~dg~slLKIwn~nk--~tGviG~FN 599 (777)
T PLN02711 522 HAASRAISGGPIYVSDSVGKHNFPLLKRLVLPDGSILRCQYYALPTRDCLFEDPLHDGKTMLKIWNLNK--FTGVIGAFN 599 (777)
T ss_pred HHHHHhhcCCCEEEecCCCCccHHHHHhhhCCCCcEecccCCCCccchhhccccccCCceEEEEEeecC--CcceEEEEE
Confidence 99999999999999999877655544433322 34443321 111 45666543 334899999
Q ss_pred CCCC-----------------ceEEEEEcccccccccc-----------ccccCcc--cc-eeecceEEEEEcCCcEEEE
Q 040445 302 RKTF-----------------SSMMTAHWDDIGIKSNN-----------TLFEHRT--LE-TKFQGKLTAKVDGHSCKMY 350 (358)
Q Consensus 302 ~~~~-----------------~~~~tv~l~~lGl~~~~-----------DlW~g~~--~~-g~~~g~~~~~l~ph~~~ll 350 (358)
-... +.+-.|...++...+.. .|..++. +. ......++++|+|-+..||
T Consensus 600 cqgagW~~~~~~~~~~~~~~~~vt~~v~~~Dv~w~~~~~~~~~~~~~~y~vy~~~s~~l~~l~~~~~l~vtL~~~~~Eif 679 (777)
T PLN02711 600 CQGGGWCRETRRNKCASQFSHTVTAKASPKDIEWNSGKSPISIEGVQVFAVYLFQSKKLVLSKPSENLEISLEPFNFELI 679 (777)
T ss_pred ecCCcccchhhhcccccCCCCceEEEEchHHhcccCCCCCcCccCceeEEEEEecCCeEEECCCCCceEEEecCcceEEE
Confidence 7422 24555666666321111 2332222 20 1124578899999999999
Q ss_pred EEeeccC
Q 040445 351 ELTPVTK 357 (358)
Q Consensus 351 rl~~~~~ 357 (358)
.+.|+.+
T Consensus 680 tv~Pv~~ 686 (777)
T PLN02711 680 TVSPVTT 686 (777)
T ss_pred EEeeeEE
Confidence 9998765
No 13
>PLN02982 galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds
Probab=99.63 E-value=6.6e-15 Score=153.42 Aligned_cols=231 Identities=17% Similarity=0.074 Sum_probs=126.4
Q ss_pred hhHHHHHHHH-hhCccEEEeecCCC-C----CC-chhHHHHHHHHHH----HHh--CCCcEEeecCCCCCCcccc-cccc
Q 040445 118 DNRIESNIAF-EQGIDYLKYDNCFN-D----DT-RPTIRYRAMSDAL----KKA--GRPIFFSMCEWGDMRPALW-GSNI 183 (358)
Q Consensus 118 ~~~~~da~~f-~WGvDylK~D~c~~-~----~~-~~~~~y~~m~~AL----~~~--gr~i~ls~c~wg~~~p~~w-~~~~ 183 (358)
.+|+..-..+ +-|||+||+|.+.. + .. ..++..++..+|| .+. ++-++-++|..+ ...+ ..+.
T Consensus 469 ~FYd~~hsyLas~GVDgVKVDvQ~~Le~L~~~~ggRv~La~ay~~al~~Sv~r~F~~ng~I~CM~~~~---~~~~~~tk~ 545 (865)
T PLN02982 469 DFYDSMHSYLASVGITGVKVDVIHTLEYVCEEYGGRVELAKAYYDGLSESLAKNFNGTGIIASMQQCN---DFFFLGTKQ 545 (865)
T ss_pred HHHHHHHHHHHHcCCCeEEEchhhhHHHhhccCCcHHHHHHHHHHHHHHHHHHhCCCCCeEeecccCc---hhhhccCCc
Confidence 3444455555 77999999998763 1 11 1223333344444 443 334544444321 1123 2455
Q ss_pred cCEEeecCCCCCc------hHHHH---HHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeec
Q 040445 184 RNSWRTTDDISDS------WARML---TIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLG 254 (358)
Q Consensus 184 ~~~wRis~Di~~~------W~~~~---~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig 254 (358)
.-+-|+|+|.++. |.... .++..++.-+.+.+.--|+|.||+...++ -.+.|.+..||+|+|++|+
T Consensus 546 sav~R~SDDF~p~dP~shp~g~~wlq~~Hi~~~AyNSLl~G~~v~PDWDMFqS~H~-----~A~fHAaaRAIsGGPIYvS 620 (865)
T PLN02982 546 ISMGRVGDDFWFQDPNGDPMGVYWLQGVHMIHCAYNSMWMGQIIQPDWDMFQSDHL-----CAEFHAGSRAICGGPVYVS 620 (865)
T ss_pred ceeeeccccccCCCCCcCccccccccceeeeehhhhhHhhccccccCchhccccCc-----hHHHHHHHHhhcCCCEEEe
Confidence 6778999998863 32110 11112222233456668999999997654 6689999999999999999
Q ss_pred cCCCCCCccccccccch--hhHhhhcc--------------CC--CeEEEEEEcCCCcEEEEEEeCCC------------
Q 040445 255 CDVGNLTAETMPIIGNE--EVIAVNQA--------------IN--DQQIWAGPLSGNRIVVLLESRKT------------ 304 (358)
Q Consensus 255 ~Dl~~l~~~~l~iL~N~--eviavnQd--------------~~--~~~vw~~~l~dg~~av~l~N~~~------------ 304 (358)
|-+.+-+-+.+.=|.-+ .|++.... ++ -+-||=..--.| +|++||--+
T Consensus 621 D~pG~Hdf~lLk~LvlpDG~IlR~~~pg~PTrDcLF~DPl~DGks~LKIWN~Nk~~G--ViG~FNCQGagW~~~~~~~~~ 698 (865)
T PLN02982 621 DSVGGHDFDLLKKLVFPDGTIPRCQHYALPTRDCLFKNPLFDKKTILKIWNFNKFGG--VIGAFNCQGAGWDPKEHRIKG 698 (865)
T ss_pred eCCCCccHHHHHhhhcCCCceeccCCCCCCCcchhccCcccCCceEEEEEeccCcCc--eEEEEEeccCCCCchhccccc
Confidence 99887665554444332 23332222 00 023443221222 466677321
Q ss_pred -----CceEEEEEccccccccc----cccccCcccc-----e-----ee-cceEEEEEcCCcEEEEEEeeccCC
Q 040445 305 -----FSSMMTAHWDDIGIKSN----NTLFEHRTLE-----T-----KF-QGKLTAKVDGHSCKMYELTPVTKL 358 (358)
Q Consensus 305 -----~~~~~tv~l~~lGl~~~----~DlW~g~~~~-----g-----~~-~g~~~~~l~ph~~~llrl~~~~~~ 358 (358)
.+.+-+|..+|+-.... ..-|+++... + .. ...++++|.|-...||.+.|+.+|
T Consensus 699 ~~~~~~~vtg~v~~~Dve~~~~~~~a~~~~~~~~~vY~~~~~el~~~~~~~~~~~vtL~~~e~elftv~PI~~~ 772 (865)
T PLN02982 699 YSECYKPVSGSVHVSDIEWDQKPEASQMGEAEEYAVYLNQAEELLLMTPKSEAIQITLQPSSFELFSFVPVTKL 772 (865)
T ss_pred cCCCCcceEEEEcHHHcccccccccccCCCcccEEEEEecCceEEEecCCCCcceEEeccceeEEEEEeeeEEc
Confidence 22344455566532211 1223332210 1 12 245788999999999999998654
No 14
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=99.56 E-value=5.7e-15 Score=148.28 Aligned_cols=125 Identities=24% Similarity=0.374 Sum_probs=95.6
Q ss_pred CCCceeeeCcccccCChhhhHHHhc--------------CcccccCCCCCcccccccccccchhhhhccCCCCCCCCCce
Q 040445 26 LTPPMGWNSWNHFHCQINEKIIRET--------------DDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNL 91 (358)
Q Consensus 26 ~~PpmGWnSW~~~~~~i~e~~i~~~--------------DdgW~~~~rd~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~~ 91 (358)
...|||||||++|+.+++|+.|+++ ||||+. +|+.++ .++ |+|
T Consensus 290 kprPi~~nsWea~Yfd~t~e~ile~vk~akk~gvE~FvlDDGwfg-~rndd~-~sl---------------------GDW 346 (687)
T COG3345 290 KPRPIGWNSWEAYYFDFTEEEILENVKEAKKFGVELFVLDDGWFG-GRNDDL-KSL---------------------GDW 346 (687)
T ss_pred CCCcceeeceeeeeecCCHHHHHHHHHHHhhcCeEEEEEcccccc-ccCcch-hhh---------------------hce
Confidence 4459999999999999999999998 999997 565552 222 999
Q ss_pred eecCCCCCCChHHHHHHHHHH---cC-----------------------------------------------------C
Q 040445 92 VANKTTFPSGTKALADYVHIL---IS-----------------------------------------------------N 115 (358)
Q Consensus 92 ~~~~~~FP~Glk~l~d~ih~~---Y~-----------------------------------------------------G 115 (358)
.+|..|||+||..|+..||+. |+ -
T Consensus 347 lv~seKfPsgiE~li~~I~e~Gl~fGIWlePemvs~dSdlfrqHPDWvvk~~G~p~~~~Rnqyvl~~s~p~vv~~l~~~l 426 (687)
T COG3345 347 LVNSEKFPSGIEELIEAIAENGLIFGIWLEPEMVSEDSDLFRQHPDWVVKVNGYPLMAGRNQYVLWLSNPIVVLDLSEDL 426 (687)
T ss_pred ecchhhccccHHHHHHHHHHcCCccceeecchhcccchHHHhhCCCeEEecCCccccccccchhhhccChHHHHHhhhHH
Confidence 999999999999999999999 22 1
Q ss_pred chhhHHHHHHHH--hhCccEEEeecCCCCCCchhH--HHHHHHHHHHHhCCCcEEeecCCCCC
Q 040445 116 SLDNRIESNIAF--EQGIDYLKYDNCFNDDTRPTI--RYRAMSDALKKAGRPIFFSMCEWGDM 174 (358)
Q Consensus 116 s~~~~~~da~~f--~WGvDylK~D~c~~~~~~~~~--~y~~m~~AL~~~gr~i~ls~c~wg~~ 174 (358)
++.+..+++..+ +||..++|+|+.+++....++ .|+.+.+ |+.....|.|.-|..|..
T Consensus 427 ~qll~~~~v~ylkwdmnr~l~klg~~~~~~l~qqry~ly~l~~~-l~~k~~~i~FeScasGg~ 488 (687)
T COG3345 427 VQLLLFHLVSYLKWDMNRELFKLGFLFWGALPQQRYQLYRLFDQ-LNLKFPHILFESCASGGE 488 (687)
T ss_pred HHHHHhhhHHHHHHHhCcceeecCCCCCccccchHHHHHHHHHH-hhhcCCCchhhhhccccc
Confidence 234556777888 899999999998886554332 2443333 566667788888887643
No 15
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=99.06 E-value=2.3e-09 Score=103.86 Aligned_cols=139 Identities=20% Similarity=0.388 Sum_probs=96.9
Q ss_pred CCCceeeeCcccccCChhhhHHHhc----------------CcccccCCCCCcccccccccccchhhhhccCCCCCCCCC
Q 040445 26 LTPPMGWNSWNHFHCQINEKIIRET----------------DDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQG 89 (358)
Q Consensus 26 ~~PpmGWnSW~~~~~~i~e~~i~~~----------------DdgW~~~~rd~~~~~~~~~~~~~~~~~~~~~~~~~d~~G 89 (358)
.++|+ ||||+.+.+.+||++|++. |++|+.. +|
T Consensus 12 ~~~p~-W~~W~~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~------------------------------~g 60 (303)
T cd06592 12 FRSPI-WSTWARYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETC------------------------------YG 60 (303)
T ss_pred hCCCc-cCChhhhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCcccc------------------------------CC
Confidence 56777 9999999999999999987 7777652 38
Q ss_pred ceeecCCCCCCChHHHHHHHHHH------------------cC-------------C----------------------c
Q 040445 90 NLVANKTTFPSGTKALADYVHIL------------------IS-------------N----------------------S 116 (358)
Q Consensus 90 ~~~~~~~~FP~Glk~l~d~ih~~------------------Y~-------------G----------------------s 116 (358)
.+..|++|||+ ++.++++||++ |. | +
T Consensus 61 ~f~~d~~~FPd-p~~mi~~l~~~G~k~~l~i~P~i~~~s~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a 139 (303)
T cd06592 61 DFDFDPTKFPD-PKGMIDQLHDLGFRVTLWVHPFINTDSENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEA 139 (303)
T ss_pred ccccChhhCCC-HHHHHHHHHHCCCeEEEEECCeeCCCCHHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHH
Confidence 99999999997 99999999998 10 2 1
Q ss_pred hhhHHHHHHHH--hhCccEEEeecCCCCC----------CchhHHHH-HHHHHHHHhCCCcEEeecCCCCCCcccccccc
Q 040445 117 LDNRIESNIAF--EQGIDYLKYDNCFNDD----------TRPTIRYR-AMSDALKKAGRPIFFSMCEWGDMRPALWGSNI 183 (358)
Q Consensus 117 ~~~~~~da~~f--~WGvDylK~D~c~~~~----------~~~~~~y~-~m~~AL~~~gr~i~ls~c~wg~~~p~~w~~~~ 183 (358)
+.+....++.+ ++|||++|+|++.... ......|. .+.++..+.+ +++++-+.|..+ ..+
T Consensus 140 ~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~~p~~~~~~~~~~~~n~y~~~~~~~~~~~~-~~~~~Rsg~~g~------~~~ 212 (303)
T cd06592 140 VDWFLSRLKSLQEKYGIDSFKFDAGEASYLPQDYVTEDPLLNPDEYTRLYAEMVAEFG-DLIEVRAGWRSQ------GLP 212 (303)
T ss_pred HHHHHHHHHHHHHHhCCcEEEeCCCCcccCCcccccCCcccCHHHHHHHHHHHHHhhc-cceEEEeeeecC------CCC
Confidence 23444555555 9999999999986421 01122343 4555555444 777776555422 233
Q ss_pred cCEEeecCCCCCchHHH---HHHHH
Q 040445 184 RNSWRTTDDISDSWARM---LTIAD 205 (358)
Q Consensus 184 ~~~wRis~Di~~~W~~~---~~~~~ 205 (358)
+-.| ++|....|+.+ ..++.
T Consensus 213 ~~~w--~GD~~s~W~~~~gl~~~i~ 235 (303)
T cd06592 213 LFVR--MMDKDSSWGGDNGLKSLIP 235 (303)
T ss_pred eeEE--cCCCCCCCCCCcCHHHHHH
Confidence 4566 89999999876 55554
No 16
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=98.43 E-value=1.2e-05 Score=76.40 Aligned_cols=174 Identities=19% Similarity=0.211 Sum_probs=99.7
Q ss_pred Cce--eecCCCCCCChHHHHHHHHHH---cC-----CchhhHHHHHHHH--hhCccEEEeecCCCCCC------------
Q 040445 89 GNL--VANKTTFPSGTKALADYVHIL---IS-----NSLDNRIESNIAF--EQGIDYLKYDNCFNDDT------------ 144 (358)
Q Consensus 89 G~~--~~~~~~FP~Glk~l~d~ih~~---Y~-----Gs~~~~~~da~~f--~WGvDylK~D~c~~~~~------------ 144 (358)
|.+ ..|+++||+ .+.++++||++ .. ...++.....+.+ +.|||++|+|++-....
T Consensus 54 ~~f~~~~d~~~Fpd-p~~~i~~l~~~g~~~~~~~~P~v~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~~~~~~ 132 (265)
T cd06589 54 GDFTFDWDAGKFPN-PKSMIDELHDNGVKLVLWIDPYIREWWAEVVKKLLVSLGVDGFWTDMGEPSPGDGNIFTGGVVGR 132 (265)
T ss_pred ceeeeecChhhCCC-HHHHHHHHHHCCCEEEEEeChhHHHHHHHHHHHhhccCCCCEEeccCCCCCcCCCccccCCcCCC
Confidence 566 899999999 99999999998 11 4456666666554 99999999999754211
Q ss_pred -ch---hHHH-----HHHHHHHHHh---CCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhccccc
Q 040445 145 -RP---TIRY-----RAMSDALKKA---GRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYAD 212 (358)
Q Consensus 145 -~~---~~~y-----~~m~~AL~~~---gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~ 212 (358)
.. +..| +...+++++. .|+++++-|.+... ..++-.| +.|...+|+.+..++.......
T Consensus 133 ~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~sRs~~~Gs------qry~~~W--~GD~~stW~~l~~~i~~~l~~~- 203 (265)
T cd06589 133 VKHEEMHNAYPLLYAEATYEALRKNSKNKRPFILSRSGYAGS------QRYAGMW--SGDNTSTWGYLRSQIPAGLTMS- 203 (265)
T ss_pred ccHHHHcchhHHHHHHHHHHHHHHhcCCCCeEEEEcCCcccc------cCcCcee--CCcccCCHHHHHHHHHHHHhhh-
Confidence 00 1122 2334555443 46888887665322 3567777 9999999999877776533221
Q ss_pred ccCCCCCCCCCcceeCCCC-CCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccchhhHhhh
Q 040445 213 HAKPGGWNDPDMLEVGNGG-MKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGNEEVIAVN 277 (358)
Q Consensus 213 ~~~pg~wnDpDmL~vG~~~-lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N~eviavn 277 (358)
..|...| =+|+- |-.+ -...|-.++-.-++++ .|++-...-... .......-.++++++.
T Consensus 204 l~G~~~~-g~Dig--Gf~~~~~~~EL~~RW~Q~g~F-~P~~R~H~~~~~-~~~epw~~~~~~~~~~ 264 (265)
T cd06589 204 MSGIPFV-GSDIG--GFTGGDPSAELYVRWFQFGAF-TPIMRFHSWNSP-KDTEPWAFDEEVTAII 264 (265)
T ss_pred ccCCccc-CCCcC--CCCCCCCCHHHHHHHHHHhcC-CcceecCCCCCC-CCcCCCCcCHHHHHhh
Confidence 1221111 12221 2112 3455666664444555 465544332221 1112334445555543
No 17
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=98.24 E-value=2.1e-05 Score=76.31 Aligned_cols=110 Identities=14% Similarity=0.241 Sum_probs=75.8
Q ss_pred CceeecCCCCCCChHHHHHHHHHH------------------cC----------------------------------Cc
Q 040445 89 GNLVANKTTFPSGTKALADYVHIL------------------IS----------------------------------NS 116 (358)
Q Consensus 89 G~~~~~~~~FP~Glk~l~d~ih~~------------------Y~----------------------------------Gs 116 (358)
|.+..|++|||+ ++.+++.||++ |. .+
T Consensus 56 ~~f~~d~~~FPd-~~~~i~~l~~~G~~~~~~~~P~i~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a 134 (308)
T cd06593 56 CDFEFDPDRFPD-PEGMLSRLKEKGFKVCLWINPYIAQKSPLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDA 134 (308)
T ss_pred eeeEECcccCCC-HHHHHHHHHHCCCeEEEEecCCCCCCchhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHH
Confidence 589999999998 89999999998 10 12
Q ss_pred hhhHHHHHHHH-hhCccEEEeecCCCC--------CCch---hHHH-----HHHHHHHHHh---CCCcEEeecCCCCCCc
Q 040445 117 LDNRIESNIAF-EQGIDYLKYDNCFND--------DTRP---TIRY-----RAMSDALKKA---GRPIFFSMCEWGDMRP 176 (358)
Q Consensus 117 ~~~~~~da~~f-~WGvDylK~D~c~~~--------~~~~---~~~y-----~~m~~AL~~~---gr~i~ls~c~wg~~~p 176 (358)
.++.....+.+ ++|||++|+|++..- +..+ +..| +.+.+++++. .|+++++-+.+...
T Consensus 135 ~~w~~~~~~~~~~~Gid~~~~D~~e~~p~~~~~~~g~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~~~~Rs~~~Gs-- 212 (308)
T cd06593 135 CKWYKDKLKPLLDMGVDCFKTDFGERIPTDVVYYDGSDGEKMHNYYALLYNKAVYEATKEVKGEGEAVVWARSAWAGS-- 212 (308)
T ss_pred HHHHHHHHHHHHHhCCcEEecCCCCCCCccccccCCCCcceeeeHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCcccc--
Confidence 35566777888 999999999998531 1111 1112 2344555443 36888886655321
Q ss_pred ccccccccCEEeecCCCCCchHHHHHHHHHh
Q 040445 177 ALWGSNIRNSWRTTDDISDSWARMLTIADMN 207 (358)
Q Consensus 177 ~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~ 207 (358)
..|+-.| +.|...+|+.+..++...
T Consensus 213 ----qry~~~w--~GD~~s~w~~L~~~i~~~ 237 (308)
T cd06593 213 ----QKYPVHW--GGDCESTFEGMAESLRGG 237 (308)
T ss_pred ----ccCCCEE--CCCcccCHHHHHHHHHHH
Confidence 2455678 999999999888777653
No 18
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=97.70 E-value=0.00033 Score=71.19 Aligned_cols=153 Identities=21% Similarity=0.288 Sum_probs=87.4
Q ss_pred CceeecCCCCCCChHHHHHHHHHH---cC-------------------------------C-------------------
Q 040445 89 GNLVANKTTFPSGTKALADYVHIL---IS-------------------------------N------------------- 115 (358)
Q Consensus 89 G~~~~~~~~FP~Glk~l~d~ih~~---Y~-------------------------------G------------------- 115 (358)
+.+..|+++||+ ++.+++.||++ +. |
T Consensus 73 ~~f~~d~~~FPd-~~~~~~~l~~~G~~~~~~~~P~v~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftn 151 (441)
T PF01055_consen 73 GDFTWDPERFPD-PKQMIDELHDQGIKVVLWVHPFVSNDSPDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTN 151 (441)
T ss_dssp BTT-B-TTTTTT-HHHHHHHHHHTT-EEEEEEESEEETTTTB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTS
T ss_pred cccccccccccc-hHHHHHhHhhCCcEEEEEeecccCCCCCcchhhhhHhhcCceeecccCCcccccccCCcccccCCCC
Confidence 788999999995 99999999998 00 1
Q ss_pred --chhhHHHHHHHH-hh-CccEEEeecCCCCC----------------Cc---hhHHHH-----HHHHHHHH---hCCCc
Q 040445 116 --SLDNRIESNIAF-EQ-GIDYLKYDNCFNDD----------------TR---PTIRYR-----AMSDALKK---AGRPI 164 (358)
Q Consensus 116 --s~~~~~~da~~f-~W-GvDylK~D~c~~~~----------------~~---~~~~y~-----~m~~AL~~---~gr~i 164 (358)
+..+.....+.+ +. |||++|+|++-... .. .+..|. ...+++++ ..|++
T Consensus 152 p~a~~w~~~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~~~~~~~~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~ 231 (441)
T PF01055_consen 152 PEARDWWKEQLKELLDDYGVDGWWLDFGEPSSFDSNNTLPEDAVHHDGYSGYEMHNLYGLLYAKATYEALREIDPNKRPF 231 (441)
T ss_dssp HHHHHHHHHHHHHHHTTST-SEEEEESTTTBSSTTTBSBCTTEECTTECEHHHHGGGHHHHHHHHHHHHHHHHSTTSC-E
T ss_pred hhHHHHHHHHHHHHHhccCCceEEeecCCcccccccccCcccceecCCCCchheeccccccchhhhhhhhhhccCCCCcc
Confidence 234556666777 77 99999999964432 00 122333 23445544 45788
Q ss_pred EEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhHHHHHHH
Q 040445 165 FFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIW 244 (358)
Q Consensus 165 ~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~~tlw 244 (358)
+++-+.|... ..++..| ++|+..+|+.+...+....... ..|...| =+| +-|..+...+|--.+-.-+
T Consensus 232 ~~sRs~~~G~------qr~~~~w--~GD~~s~w~~L~~~i~~~l~~~-~~G~~~~-g~D--igG~~~~~~~eL~~RW~q~ 299 (441)
T PF01055_consen 232 IFSRSGWAGS------QRYGGHW--SGDNSSSWDGLRSSIPAMLNMG-LSGYPFW-GSD--IGGFSGDPDEELYIRWYQF 299 (441)
T ss_dssp EEESSEETTG------GGTCEEE--ECSSBSSHHHHHHHHHHHHHHH-CTT-SSE-EEE--ET-SBSTSSHHHHHHHHHH
T ss_pred eeecccCCCC------Cccceee--cccccccHHHHHHHHHHHHHHh-hhhccee-cCc--ccccCCCCCHHHHHHHHHh
Confidence 8875544321 3566667 9999999999877766432221 1222111 011 1122222455666665555
Q ss_pred HHhcCCeeecc
Q 040445 245 AISKAPLLLGC 255 (358)
Q Consensus 245 ai~~sPLiig~ 255 (358)
+++ +|++-..
T Consensus 300 ~~f-~p~~r~h 309 (441)
T PF01055_consen 300 GAF-SPLFRNH 309 (441)
T ss_dssp HTT-SSSEEEE
T ss_pred hcC-Ccceeec
Confidence 665 4666554
No 19
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=97.64 E-value=0.00095 Score=65.21 Aligned_cols=153 Identities=12% Similarity=0.191 Sum_probs=91.2
Q ss_pred CCceeecCCCCCCChHHHHHHHHHH------------------cC-----------------------------------
Q 040445 88 QGNLVANKTTFPSGTKALADYVHIL------------------IS----------------------------------- 114 (358)
Q Consensus 88 ~G~~~~~~~~FP~Glk~l~d~ih~~------------------Y~----------------------------------- 114 (358)
+|.+..|+++||+ .+.+++.||++ |.
T Consensus 59 ~~~f~wd~~~FPd-p~~mi~~L~~~G~k~~~~v~P~v~~~~~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp 137 (317)
T cd06598 59 MGNLDWDRKAFPD-PAGMIADLAKKGVKTIVITEPFVLKNSKNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDP 137 (317)
T ss_pred eeeeEeccccCCC-HHHHHHHHHHcCCcEEEEEcCcccCCchhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCH
Confidence 4899999999998 99999999998 10
Q ss_pred CchhhHHHHHHHH-hhCccEEEeecCCCCCC---------ch---hHHHH-----HHHHHHHH---hCCCcEEeecCCCC
Q 040445 115 NSLDNRIESNIAF-EQGIDYLKYDNCFNDDT---------RP---TIRYR-----AMSDALKK---AGRPIFFSMCEWGD 173 (358)
Q Consensus 115 Gs~~~~~~da~~f-~WGvDylK~D~c~~~~~---------~~---~~~y~-----~m~~AL~~---~gr~i~ls~c~wg~ 173 (358)
.+.++..+..+.+ +.|||.+|.|+|-.... .+ +..|. +..+++++ ..||++++-+.+..
T Consensus 138 ~a~~w~~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~~~~~~g~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~~~~~Rs~~~G 217 (317)
T cd06598 138 AAQAWFHDNYKKLIDQGVTGWWGDLGEPEVHPPDMCHHKGKAAEVHNIYGHLWAKSIYEGYQQNYPNERPFILMRAGFAG 217 (317)
T ss_pred HHHHHHHHHHHHhhhCCccEEEecCCCccccCCccccCCCcHhHHhhHHHHHHHHHHHHHHHHhcCCCCeEEEEecCcCc
Confidence 1235556667778 89999999999863100 11 12232 22334443 24788887655421
Q ss_pred CCccccccccc-CEEeecCCCCCchHHHHHHHHHhcccccccCCCCCCCCCcceeCC-CC--CCchhhHHHHHHHHHhcC
Q 040445 174 MRPALWGSNIR-NSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGN-GG--MKYNEYVVHFSIWAISKA 249 (358)
Q Consensus 174 ~~p~~w~~~~~-~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~wnDpDmL~vG~-~~--lt~~E~rt~~tlwai~~s 249 (358)
. ..|+ -.| ++|+..+|+.+..++....... ..|-..| =+| +|. .+ ....|--.+-.-++++ +
T Consensus 218 s------qry~~~~W--sGD~~s~W~~L~~~i~~~l~~~-l~G~~~~-g~D---IGGf~~~~~~~~EL~~RW~q~g~f-~ 283 (317)
T cd06598 218 S------QRYGVIPW--SGDVGRTWDGLKSQPNAALQMS-MSGIDYY-HSD---IGGFAGGDELDPELYTRWFQYGAF-D 283 (317)
T ss_pred c------ccCcCCcc--CCCCcCCHHHHHHHHHHHHhhh-ccCCccc-CCC---cCCcCCCCCCCHHHHHHHHHhccC-C
Confidence 1 3454 357 8999999999887776533221 1222222 012 231 11 2455766664444443 4
Q ss_pred Ceeecc
Q 040445 250 PLLLGC 255 (358)
Q Consensus 250 PLiig~ 255 (358)
|++-..
T Consensus 284 P~~R~H 289 (317)
T cd06598 284 PPFRPH 289 (317)
T ss_pred cccccC
Confidence 666643
No 20
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=97.63 E-value=0.0015 Score=64.42 Aligned_cols=153 Identities=20% Similarity=0.185 Sum_probs=89.5
Q ss_pred CCceeecCCCCCCChHHHHHHHHHH----------c-------C----------------C-------------------
Q 040445 88 QGNLVANKTTFPSGTKALADYVHIL----------I-------S----------------N------------------- 115 (358)
Q Consensus 88 ~G~~~~~~~~FP~Glk~l~d~ih~~----------Y-------~----------------G------------------- 115 (358)
++.+..|+++||+ .+.+++.+|++ | . |
T Consensus 53 ~~~f~~d~~~fPd-p~~m~~~l~~~g~~~~~~~~P~v~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftn 131 (339)
T cd06604 53 YRVFTWDKERFPD-PKELIKELHEQGFKVVTIIDPGVKVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTN 131 (339)
T ss_pred CCceeeccccCCC-HHHHHHHHHHCCCEEEEEEeCceeCCCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCC
Confidence 3789999999997 99999999998 1 0 1
Q ss_pred --chhhHHHHHHHH-hhCccEEEeecCCCCCC---------------------ch---hHHHH-----HHHHHHHHh---
Q 040445 116 --SLDNRIESNIAF-EQGIDYLKYDNCFNDDT---------------------RP---TIRYR-----AMSDALKKA--- 160 (358)
Q Consensus 116 --s~~~~~~da~~f-~WGvDylK~D~c~~~~~---------------------~~---~~~y~-----~m~~AL~~~--- 160 (358)
+.++..+..+.+ +.|||++|+|++..... ++ +..|. +..+++++.
T Consensus 132 p~a~~ww~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~~~~~~p~~~~~~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~~~ 211 (339)
T cd06604 132 PKVREWWGSLYKKFVDLGVDGIWNDMNEPAVFNTPGKTTMPRDAVHRLDGGGGTHEEVHNVYGLLMARATYEGLKKARPN 211 (339)
T ss_pred hHHHHHHHHHHHHHhhCCCceEeecCCCccccCCcccccCCccceeeCCCCCCcHhHhcchhhHHHHHHHHHHHHHhCCC
Confidence 124556667778 99999999998753100 10 11222 233444443
Q ss_pred CCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhHHH
Q 040445 161 GRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVH 240 (358)
Q Consensus 161 gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~ 240 (358)
.|+++++-+.+... ..++-.| ++|...+|+.+..++....... ..|-..|. +| +-|-.+-..+|-.++
T Consensus 212 ~r~~~~sRs~~~G~------qry~~~W--~GD~~ssW~~L~~~i~~~l~~~-l~G~~~~g-~D--IGGf~~~~~~EL~~R 279 (339)
T cd06604 212 ERPFILTRAGYAGI------QRYAAVW--TGDNRSSWEHLRLSIPMLLNLG-LSGVPFVG-AD--IGGFGGDPSPELLVR 279 (339)
T ss_pred CCcEEEEecccccc------ccccccc--CCcccCCHHHHHHHHHHHHHHH-hcCCcccc-cc--cCCCCCCCCHHHHHH
Confidence 47888876554322 2455577 9999999998877765432221 12222221 22 111111234566666
Q ss_pred HHHHHHhcCCeeec
Q 040445 241 FSIWAISKAPLLLG 254 (358)
Q Consensus 241 ~tlwai~~sPLiig 254 (358)
-.=++++ +|++-.
T Consensus 280 W~Q~g~f-~P~~R~ 292 (339)
T cd06604 280 WMQLGAF-FPFFRN 292 (339)
T ss_pred HHHHHhc-cchhhc
Confidence 5555555 466644
No 21
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=97.59 E-value=0.0025 Score=62.82 Aligned_cols=110 Identities=17% Similarity=0.207 Sum_probs=74.7
Q ss_pred CCceeecCCCCCCChHHHHHHHHHH-------------cC---------------CchhhHHHHHHHH-hhCccEEEeec
Q 040445 88 QGNLVANKTTFPSGTKALADYVHIL-------------IS---------------NSLDNRIESNIAF-EQGIDYLKYDN 138 (358)
Q Consensus 88 ~G~~~~~~~~FP~Glk~l~d~ih~~-------------Y~---------------Gs~~~~~~da~~f-~WGvDylK~D~ 138 (358)
++.++.|+++||+ .+.+++.||++ |+ -+.++.....+.+ +-|||+++.|.
T Consensus 53 ~~~Ft~d~~~FPd-p~~mv~~L~~~G~klv~~i~P~i~~g~~~~~~~~~pDftnp~ar~wW~~~~~~l~~~Gv~~~W~Dm 131 (332)
T cd06601 53 YRTFTTNGGGFPN-PKEMFDNLHNKGLKCSTNITPVISYGGGLGSPGLYPDLGRPDVREWWGNQYKYLFDIGLEFVWQDM 131 (332)
T ss_pred CCceeecCCCCCC-HHHHHHHHHHCCCeEEEEecCceecCccCCCCceeeCCCCHHHHHHHHHHHHHHHhCCCceeecCC
Confidence 4899999999998 99999999998 11 1345666666778 89999999997
Q ss_pred CCCCC-------------------C--------c---hhHHHH-----HHHHHHHH-----hCCCcEEeecCCCCCCccc
Q 040445 139 CFNDD-------------------T--------R---PTIRYR-----AMSDALKK-----AGRPIFFSMCEWGDMRPAL 178 (358)
Q Consensus 139 c~~~~-------------------~--------~---~~~~y~-----~m~~AL~~-----~gr~i~ls~c~wg~~~p~~ 178 (358)
+-... . . .+-.|. +..+++++ ..||++++-|.+...
T Consensus 132 nEp~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~hN~Y~~~~~~a~~e~~~~~~~~~~~RpfiltRS~~aGs---- 207 (332)
T cd06601 132 TTPAIMPSYGDMKGFPPRLLVTDDSYENNVKRKPAIELWNLYSYNLHKATWHGLNNLNARKNKRNFIIGRGSYAGM---- 207 (332)
T ss_pred CCcccccCCCccCCCCCcccccCCccccccCCchHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCcEEEEecCcCcc----
Confidence 53210 0 0 011121 22334433 248999987665322
Q ss_pred ccccccCEEeecCCCCCchHHHHHHHHH
Q 040445 179 WGSNIRNSWRTTDDISDSWARMLTIADM 206 (358)
Q Consensus 179 w~~~~~~~wRis~Di~~~W~~~~~~~~~ 206 (358)
..|+-.| ++|+..+|+.+...+..
T Consensus 208 --qrY~~~W--sGDn~stW~~L~~si~~ 231 (332)
T cd06601 208 --QRFAGLW--TGDNSSSWDFLQINIAQ 231 (332)
T ss_pred --CCcCcee--CCCcccCHHHHHHHHHH
Confidence 3667788 99999999988766653
No 22
>PRK10658 putative alpha-glucosidase; Provisional
Probab=97.57 E-value=0.0017 Score=69.59 Aligned_cols=109 Identities=17% Similarity=0.253 Sum_probs=74.6
Q ss_pred CceeecCCCCCCChHHHHHHHHHH----------c--------C-------------C---------------------c
Q 040445 89 GNLVANKTTFPSGTKALADYVHIL----------I--------S-------------N---------------------S 116 (358)
Q Consensus 89 G~~~~~~~~FP~Glk~l~d~ih~~----------Y--------~-------------G---------------------s 116 (358)
+.+..|+++||+ .+.+++.||++ | . | +
T Consensus 315 ~~f~wd~~~FPd-p~~mi~~L~~~G~k~~~~i~P~i~~~s~~f~e~~~~gy~vk~~~G~~~~~~~W~g~~~~~Dftnp~a 393 (665)
T PRK10658 315 CDFEWDPRTFPD-PEGMLKRLKAKGLKICVWINPYIAQKSPLFKEGKEKGYLLKRPDGSVWQWDKWQPGMAIVDFTNPDA 393 (665)
T ss_pred eeeEEChhhCCC-HHHHHHHHHHCCCEEEEeccCCcCCCchHHHHHHHCCeEEECCCCCEeeeeecCCCceeecCCCHHH
Confidence 789999999997 99999999999 1 0 1 2
Q ss_pred hhhHHHHHHHH-hhCccEEEeecCCC--------CCCch---hHHH-----HHHHHHHHHh---CCCcEEeecCCCCCCc
Q 040445 117 LDNRIESNIAF-EQGIDYLKYDNCFN--------DDTRP---TIRY-----RAMSDALKKA---GRPIFFSMCEWGDMRP 176 (358)
Q Consensus 117 ~~~~~~da~~f-~WGvDylK~D~c~~--------~~~~~---~~~y-----~~m~~AL~~~---gr~i~ls~c~wg~~~p 176 (358)
..++....+.+ +.|||.+|.|+... ++..+ +-.| ++..+++++. .|+++++-|.|...
T Consensus 394 r~W~~~~~~~l~d~Gvdgfw~D~gE~~p~d~~~~~G~~~~~~hN~Y~~l~~ka~~e~l~~~~~~~r~~i~tRs~~aGs-- 471 (665)
T PRK10658 394 CKWYADKLKGLLDMGVDCFKTDFGERIPTDVVWFDGSDPQKMHNYYTYLYNKTVFDVLKETRGEGEAVLFARSATVGG-- 471 (665)
T ss_pred HHHHHHHHHHHHhcCCcEEEecCCceeeccceecCCCcHHHhcchhHHHHHHHHHHHHHHhcCCCceEEEEecccCCC--
Confidence 35556667778 99999999998532 11221 1122 2333455552 47888887665322
Q ss_pred ccccccccCEEeecCCCCCchHHHHHHHHH
Q 040445 177 ALWGSNIRNSWRTTDDISDSWARMLTIADM 206 (358)
Q Consensus 177 ~~w~~~~~~~wRis~Di~~~W~~~~~~~~~ 206 (358)
..|+-.| ++|+..+|+.+...+..
T Consensus 472 ----Qry~~~W--sGD~~stw~~l~~si~~ 495 (665)
T PRK10658 472 ----QQFPVHW--GGDCYSNYESMAESLRG 495 (665)
T ss_pred ----CCCCCEE--CCCCCCCHHHHHHHHHH
Confidence 2555668 99999999998877654
No 23
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=97.56 E-value=0.0022 Score=62.72 Aligned_cols=153 Identities=17% Similarity=0.147 Sum_probs=90.0
Q ss_pred CCceeecCCCCCCChHHHHHHHHHH----------c-------C--------------------------C---------
Q 040445 88 QGNLVANKTTFPSGTKALADYVHIL----------I-------S--------------------------N--------- 115 (358)
Q Consensus 88 ~G~~~~~~~~FP~Glk~l~d~ih~~----------Y-------~--------------------------G--------- 115 (358)
++.+..|+++||+ .+.+++.||++ | . |
T Consensus 53 ~~~f~~d~~~FPd-p~~~i~~l~~~g~k~~~~~~P~i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftn 131 (317)
T cd06600 53 YRLFTWDPYRFPE-PKKLIDELHKRNVKLVTIVDPGIRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTN 131 (317)
T ss_pred CCceeechhcCCC-HHHHHHHHHHCCCEEEEEeeccccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCC
Confidence 4788999999997 99999999998 1 0 1
Q ss_pred --chhhHHHHHHHH--hhCccEEEeecCCCCCC-chhHHHH-----HHHHHHHH---hCCCcEEeecCCCCCCccccccc
Q 040445 116 --SLDNRIESNIAF--EQGIDYLKYDNCFNDDT-RPTIRYR-----AMSDALKK---AGRPIFFSMCEWGDMRPALWGSN 182 (358)
Q Consensus 116 --s~~~~~~da~~f--~WGvDylK~D~c~~~~~-~~~~~y~-----~m~~AL~~---~gr~i~ls~c~wg~~~p~~w~~~ 182 (358)
+..+.....+.+ +.|||.+|.|++-.... ..+..|. +..+++++ ..|+++++-+.|... ..
T Consensus 132 p~a~~ww~~~~~~~~~~~gvdg~w~D~~Ep~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~~sRs~~~G~------qr 205 (317)
T cd06600 132 PDTREWWAGLFSEWLNSQGVDGIWLDMNEPSDFEKVHNLYGLYEAMATAEGFRTSHPRNRIFILTRSGFAGS------QK 205 (317)
T ss_pred hHHHHHHHHHHHHHhhcCCCceEEeeCCCCccHHHhcchhhHHHHHHHHHHHHHhcCCCCceEEEecccccc------CC
Confidence 123334444454 78999999999865311 0111222 22344444 357999987765432 24
Q ss_pred ccCEEeecCCCCCchHHHHHHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhHHHHHHHHHhcCCeeec
Q 040445 183 IRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVHFSIWAISKAPLLLG 254 (358)
Q Consensus 183 ~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~~tlwai~~sPLiig 254 (358)
++-.| ++|+..+|+.+...+....... ..|-..| =+|+ -|..+-+..|-..+-.-++++ +|++-.
T Consensus 206 y~~~W--~GD~~s~W~~L~~~i~~~l~~g-l~G~p~~-g~Di--GGf~~~~~~EL~~RW~Q~gaf-~P~~R~ 270 (317)
T cd06600 206 YAAIW--TGDNTASWDDLKLSIPLVLGLS-ISGIPFV-GCDI--GGFQGDNSMELLVRWYQLGAF-FPFYRS 270 (317)
T ss_pred ccceE--CCcccccHHHHHHHHHHHHHHH-hcCCCcc-Cccc--CCCCCCCCHHHHHHHHHHhhc-Cceeec
Confidence 55677 9999999998877665432221 1222222 1221 111123455666664555555 487753
No 24
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=97.44 E-value=0.0027 Score=61.25 Aligned_cols=108 Identities=18% Similarity=0.210 Sum_probs=70.8
Q ss_pred CCCCceeecCCCCCCChHHHHHHHHHH----------cCC---------------------------------ch-hhHH
Q 040445 86 QCQGNLVANKTTFPSGTKALADYVHIL----------ISN---------------------------------SL-DNRI 121 (358)
Q Consensus 86 d~~G~~~~~~~~FP~Glk~l~d~ih~~----------Y~G---------------------------------s~-~~~~ 121 (358)
+.++.+..|+++||+ .+.++++||++ +-+ .. -|.+
T Consensus 61 ~~~~~ft~d~~~FPd-p~~mi~~Lh~~G~k~v~~v~P~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~D~tnp~a~~~w~~ 139 (292)
T cd06595 61 SGWTGYSWNRKLFPD-PEKLLQDLHDRGLKVTLNLHPADGIRAHEDQYPEMAKALGVDPATEGPILFDLTNPKFMDAYFD 139 (292)
T ss_pred CCcceeEEChhcCCC-HHHHHHHHHHCCCEEEEEeCCCcccCCCcHHHHHHHHhcCCCcccCCeEEecCCCHHHHHHHHH
Confidence 345899999999997 99999999998 100 01 1234
Q ss_pred HHHHHH-hhCccEEEeecCCCC-----CCchh-----HHHHHHHHHHHHhCCCcEEeecCCCCCCcccccccccCEEeec
Q 040445 122 ESNIAF-EQGIDYLKYDNCFND-----DTRPT-----IRYRAMSDALKKAGRPIFFSMCEWGDMRPALWGSNIRNSWRTT 190 (358)
Q Consensus 122 ~da~~f-~WGvDylK~D~c~~~-----~~~~~-----~~y~~m~~AL~~~gr~i~ls~c~wg~~~p~~w~~~~~~~wRis 190 (358)
...+.+ +.|||.+|.|++-.. +..+. ..|..++ +...|+++++-+.+... ..|+-.| +
T Consensus 140 ~~~~~~~~~Gidg~W~D~~E~~~~~~~~~~~~~~~~~~~y~~~~---~~~~r~f~lsRs~~~G~------qry~~~W--s 208 (292)
T cd06595 140 NVHRPLEKQGVDFWWLDWQQGNRTRTPGLDPLWWLNHVHYLDSA---RNGRRPLIFSRWAGLGS------HRYPIGF--S 208 (292)
T ss_pred HHHHHHHhcCCcEEEecCCCCcccccCCcchHHHHHHHHHHHhh---ccCCCcEEEEeecccCC------CcCCCcc--C
Confidence 444556 889999999986431 11111 1122221 13478999986654322 3666778 9
Q ss_pred CCCCCchHHHHHHHH
Q 040445 191 DDISDSWARMLTIAD 205 (358)
Q Consensus 191 ~Di~~~W~~~~~~~~ 205 (358)
+|+..+|+.+...+.
T Consensus 209 GD~~s~W~~l~~~i~ 223 (292)
T cd06595 209 GDTIISWASLAFQPY 223 (292)
T ss_pred CCcccCHHHHHHHHH
Confidence 999999998876553
No 25
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=97.42 E-value=0.0021 Score=62.84 Aligned_cols=109 Identities=22% Similarity=0.224 Sum_probs=72.2
Q ss_pred CceeecCCCCCCChHHHHHHHHHH----------c--------C-------------C----------------------
Q 040445 89 GNLVANKTTFPSGTKALADYVHIL----------I--------S-------------N---------------------- 115 (358)
Q Consensus 89 G~~~~~~~~FP~Glk~l~d~ih~~----------Y--------~-------------G---------------------- 115 (358)
+.+.-|+++||+ .+.+++.||++ | . |
T Consensus 63 ~~f~~d~~~FPd-p~~mi~~L~~~g~k~~~~i~P~i~~~~~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~ 141 (317)
T cd06599 63 YVFNWNKDRFPD-PAAFVAKFHERGIRLAPNIKPGLLQDHPRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPE 141 (317)
T ss_pred eeeecCcccCCC-HHHHHHHHHHCCCEEEEEeCCcccCCCHHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChH
Confidence 468889999997 99999999998 1 0 1
Q ss_pred chhhHHHHH-HHH-hhCccEEEeecCCCC-----------CC--c---hhHHH-----HHHHHHHHHh---CCCcEEeec
Q 040445 116 SLDNRIESN-IAF-EQGIDYLKYDNCFND-----------DT--R---PTIRY-----RAMSDALKKA---GRPIFFSMC 169 (358)
Q Consensus 116 s~~~~~~da-~~f-~WGvDylK~D~c~~~-----------~~--~---~~~~y-----~~m~~AL~~~---gr~i~ls~c 169 (358)
+..+..... +.+ +.|||.+|.|++-.. +. . .+..| ++..+++++. .||++++-+
T Consensus 142 a~~ww~~~~~~~~~~~Gvdg~w~D~~E~~~~~~~~~~~~~g~~~~~~~~~n~y~~l~~~a~~~~~~~~~~~~r~f~ltRs 221 (317)
T cd06599 142 GREWWKEGVKEALLDLGIDSTWNDNNEYEIWDDDAVCDGFGKPGTIGELRPVQPNLMARASHEAQAEHYPNRRPYIVSRS 221 (317)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEecCCCCccCCCcceecCCCCccchhhcccchHHHHHHHHHHHHHHhCCCCCcEEEEcC
Confidence 124444555 556 889999999998541 00 0 01122 2233455443 468888765
Q ss_pred CCCCCCcccccccccCEEeecCCCCCchHHHHHHHHH
Q 040445 170 EWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADM 206 (358)
Q Consensus 170 ~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~ 206 (358)
.+... ..|+-.| ++|+..+|+.+..++..
T Consensus 222 ~~~G~------qry~~~W--sGD~~s~W~~L~~~i~~ 250 (317)
T cd06599 222 GFAGI------QRYAQTW--SGDNRTSWKTLRYNIAM 250 (317)
T ss_pred Ccccc------cCCcCee--CCCcccCHHHHHHHHHH
Confidence 54322 3557778 99999999988777764
No 26
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=97.39 E-value=0.0038 Score=67.79 Aligned_cols=154 Identities=19% Similarity=0.245 Sum_probs=97.4
Q ss_pred eeeeCcccccCChhhhHHHhcCcccccCCCCCcccccccccccchhhhhccCCCCCCCCCceeecCCCCCCChHHHHHHH
Q 040445 30 MGWNSWNHFHCQINEKIIRETDDCWGESSRDSQISLSCSFHMFDSLTQIAAKPLPNQCQGNLVANKTTFPSGTKALADYV 109 (358)
Q Consensus 30 mGWnSW~~~~~~i~e~~i~~~DdgW~~~~rd~~~~~~~~~~~~~~~~~~~~~~~~~d~~G~~~~~~~~FP~Glk~l~d~i 109 (358)
+| +.|-+....-+|+++.+..+...+ |+ +.|+..++|..-. .|.++.+..|+.+||+ -|.|++++
T Consensus 266 ~G-~~~~~~~~~~~e~~v~~~i~~~~~--~~----IP~d~~~lD~~~~-------~~~~~~F~wd~~~FP~-pk~mi~~l 330 (772)
T COG1501 266 LG-WLWTSRYTYYDEDEVLEFIDEMRE--RD----IPLDVFVLDIDFW-------MDNWGDFTWDPDRFPD-PKQMIAEL 330 (772)
T ss_pred cC-CCceeccccccHHHHHHHHhhccc--cc----CcceEEEEeehhh-------hccccceEECcccCCC-HHHHHHHH
Confidence 47 233333334568888877555543 22 3333333333200 1134889999999998 99999999
Q ss_pred HHH----------cC------------------------------------------CchhhHHH-HHHHH-hhCccEEE
Q 040445 110 HIL----------IS------------------------------------------NSLDNRIE-SNIAF-EQGIDYLK 135 (358)
Q Consensus 110 h~~----------Y~------------------------------------------Gs~~~~~~-da~~f-~WGvDylK 135 (358)
|++ |- ..+.+... ..+.+ +-|||.+|
T Consensus 331 ~~~Gikl~~~i~P~i~~d~~~~~e~~~~Gy~~k~~~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g~W 410 (772)
T COG1501 331 HEKGIKLIVIINPYIKQDSPLFKEAIEKGYFVKDPDGEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGVDGFW 410 (772)
T ss_pred HhcCceEEEEeccccccCCchHHHHHHCCeEEECCCCCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCccEEE
Confidence 999 10 12455563 44556 99999999
Q ss_pred eecCCCCCC---------c---hhHHH-----HHHHHHHHHh---CCCcEEeecCCCCCCcccccccccCEEeecCCCCC
Q 040445 136 YDNCFNDDT---------R---PTIRY-----RAMSDALKKA---GRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISD 195 (358)
Q Consensus 136 ~D~c~~~~~---------~---~~~~y-----~~m~~AL~~~---gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~ 195 (358)
.|++-.... . .+..| ++..+|+++. .|+++|+-|-|... ..++-.| ++|+..
T Consensus 411 ~D~nEp~~~~~~~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~~~~r~~~lsRsg~aG~------Q~~~~~W--sGD~~s 482 (772)
T COG1501 411 NDMNEPEPFDGDGFGNGIDHEEMHNLYPLLYAKAVYEALKELGGNERPFILSRSGYAGS------QRYAAHW--SGDNRS 482 (772)
T ss_pred ccCCCCccccccccccccCHHHHhcchhHHHHHHHHHHHHhhcCCCceEEEEecccccc------eecccee--CCcccc
Confidence 999755211 1 11122 2344566655 58999997765322 2567888 999999
Q ss_pred chHHHHHHHHH
Q 040445 196 SWARMLTIADM 206 (358)
Q Consensus 196 ~W~~~~~~~~~ 206 (358)
.|+++..++..
T Consensus 483 ~wd~l~~si~~ 493 (772)
T COG1501 483 SWDSLRESIPA 493 (772)
T ss_pred chHHHHhhHHh
Confidence 99998877764
No 27
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=97.36 E-value=0.0042 Score=61.34 Aligned_cols=110 Identities=16% Similarity=0.198 Sum_probs=71.4
Q ss_pred CCceeecCCCCCCCh--HHHHHHHHHH----------cC------------------------------------C----
Q 040445 88 QGNLVANKTTFPSGT--KALADYVHIL----------IS------------------------------------N---- 115 (358)
Q Consensus 88 ~G~~~~~~~~FP~Gl--k~l~d~ih~~----------Y~------------------------------------G---- 115 (358)
++.+..|+++||+ . +.+++.||++ |- |
T Consensus 53 ~~~f~~d~~~FPd-p~~~~mi~~L~~~G~k~~~~i~P~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~ 131 (339)
T cd06602 53 RRDFTLDPVRFPG-LKMPEFVDELHANGQHYVPILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVF 131 (339)
T ss_pred ccceecccccCCC-ccHHHHHHHHHHCCCEEEEEEeCccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcC
Confidence 3899999999998 6 9999999998 10 1
Q ss_pred -------chhhHHHHHHHH--hhCccEEEeecCCCCCC-chhHHHH-----HHHHHHHH-h-CCCcEEeecCCCCCCccc
Q 040445 116 -------SLDNRIESNIAF--EQGIDYLKYDNCFNDDT-RPTIRYR-----AMSDALKK-A-GRPIFFSMCEWGDMRPAL 178 (358)
Q Consensus 116 -------s~~~~~~da~~f--~WGvDylK~D~c~~~~~-~~~~~y~-----~m~~AL~~-~-gr~i~ls~c~wg~~~p~~ 178 (358)
+..+.....+.+ +.|||.+|.|++-.... ..+..|. ...+++++ . .|+++++-+.|...
T Consensus 132 ~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~hN~y~~~~~~~~~~~~~~~~~~r~~~~sRs~~~G~---- 207 (339)
T cd06602 132 PDFLNPNTQEWWTDEIKDFHDQVPFDGLWIDMNEPSNFYDVHNLYGLSEAIATYKALQSIPGKRPFVISRSTFPGS---- 207 (339)
T ss_pred cCCCCHHHHHHHHHHHHHHHhcCCCcEEEecCCCCchHhhhcchhhHHHHHHHHHHHHhcCCCCCEEEEecCcccc----
Confidence 113334455555 68999999998764211 1111222 22334443 3 36888876655322
Q ss_pred ccccccCEEeecCCCCCchHHHHHHHHH
Q 040445 179 WGSNIRNSWRTTDDISDSWARMLTIADM 206 (358)
Q Consensus 179 w~~~~~~~wRis~Di~~~W~~~~~~~~~ 206 (358)
..++-.| ++|+..+|+.+..++..
T Consensus 208 --qry~~~w--~GD~~s~W~~L~~~i~~ 231 (339)
T cd06602 208 --GRYAGHW--LGDNASTWEDLRYSIIG 231 (339)
T ss_pred --cccceeE--CCCccCCHHHHHHHHHH
Confidence 2455577 99999999988776654
No 28
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=97.29 E-value=0.0052 Score=60.10 Aligned_cols=109 Identities=17% Similarity=0.324 Sum_probs=70.5
Q ss_pred CceeecCCCCCCChHHHHHHHHHH----------c--------C-------------C--------------------ch
Q 040445 89 GNLVANKTTFPSGTKALADYVHIL----------I--------S-------------N--------------------SL 117 (358)
Q Consensus 89 G~~~~~~~~FP~Glk~l~d~ih~~----------Y--------~-------------G--------------------s~ 117 (358)
|.+..|+++||+ .+.++++||++ | . | +.
T Consensus 56 ~~f~~d~~~FPd-p~~mi~~L~~~G~kv~~~i~P~v~~~~~~y~e~~~~g~~v~~~~g~~~~~~w~g~~~~~Dftnp~a~ 134 (319)
T cd06591 56 GEWKFDPERFPD-PKAMVRELHEMNAELMISIWPTFGPETENYKEMDEKGYLIKTDRGPRVTMQFGGNTRFYDATNPEAR 134 (319)
T ss_pred eeEEEChhhCCC-HHHHHHHHHHCCCEEEEEecCCcCCCChhHHHHHHCCEEEEcCCCCeeeeeCCCCccccCCCCHHHH
Confidence 499999999998 99999999998 1 0 1 12
Q ss_pred hhHHHHH-HHH-hhCccEEEeecCCCCCC--------------c---hhHHHH-----HHHHHHHHh---CCCcEEeecC
Q 040445 118 DNRIESN-IAF-EQGIDYLKYDNCFNDDT--------------R---PTIRYR-----AMSDALKKA---GRPIFFSMCE 170 (358)
Q Consensus 118 ~~~~~da-~~f-~WGvDylK~D~c~~~~~--------------~---~~~~y~-----~m~~AL~~~---gr~i~ls~c~ 170 (358)
.+....+ +.+ +.|||.+|.|++-.... . .+..|. +..+++++. .||++++-+.
T Consensus 135 ~w~~~~~~~~~~~~Gvdg~w~D~~Ep~~~~~~~~~~~~~~~~~~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~f~~sRs~ 214 (319)
T cd06591 135 EYYWKQLKKNYYDKGVDAWWLDAAEPEYSVYDFGLDNYRYHLGPGLEVGNAYPLMHAKGIYEGQRAAGDEKRVVILTRSA 214 (319)
T ss_pred HHHHHHHHHHhhcCCCcEEEecCCCCCccCCcccccCcccCCCCchhhhhhhHHHHHHHHHHHHHHhCCCCCceEEEecc
Confidence 3333333 446 89999999999753210 0 112232 233444444 4788887554
Q ss_pred CCCCCccccccccc-CEEeecCCCCCchHHHHHHHHH
Q 040445 171 WGDMRPALWGSNIR-NSWRTTDDISDSWARMLTIADM 206 (358)
Q Consensus 171 wg~~~p~~w~~~~~-~~wRis~Di~~~W~~~~~~~~~ 206 (358)
+... ..|+ -.| ++|...+|+.+...+..
T Consensus 215 ~~Gs------qry~~~~W--~GD~~s~w~~L~~~i~~ 243 (319)
T cd06591 215 WAGS------QRYGALVW--SGDIDSSWETLRRQIAA 243 (319)
T ss_pred cccc------ccccCcee--CCCccccHHHHHHHHHH
Confidence 4211 2555 367 89999999988777654
No 29
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=96.94 E-value=0.021 Score=56.21 Aligned_cols=153 Identities=16% Similarity=0.080 Sum_probs=86.6
Q ss_pred CCceeecCCCCCCChHHHHHHHHHH----------c----------C---------------------------------
Q 040445 88 QGNLVANKTTFPSGTKALADYVHIL----------I----------S--------------------------------- 114 (358)
Q Consensus 88 ~G~~~~~~~~FP~Glk~l~d~ih~~----------Y----------~--------------------------------- 114 (358)
++.+..|+++||+ .+.+++.||++ | .
T Consensus 53 ~~~f~~d~~~FPd-p~~mi~~L~~~G~k~~~~~~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftn 131 (339)
T cd06603 53 KRYFTWDKKKFPD-PEKMQEKLASKGRKLVTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLN 131 (339)
T ss_pred CCceEeCcccCCC-HHHHHHHHHHCCCEEEEEecCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCC
Confidence 3789999999997 99999999998 1 0
Q ss_pred -CchhhHHHHHHHH-h---hCccEEEeecCCCCC-----------------Cch---hHHHH-----HHHHHHHHh----
Q 040445 115 -NSLDNRIESNIAF-E---QGIDYLKYDNCFNDD-----------------TRP---TIRYR-----AMSDALKKA---- 160 (358)
Q Consensus 115 -Gs~~~~~~da~~f-~---WGvDylK~D~c~~~~-----------------~~~---~~~y~-----~m~~AL~~~---- 160 (358)
.+.++.....+.+ . -|++++++|.+-... ..+ +..|. +..+++++.
T Consensus 132 p~a~~ww~~~~~~~~~~~~~g~~g~w~D~~Ep~~f~~~~~~~p~d~~~~~~~~~~~~hN~y~~~~~~a~~e~~~~~~~~~ 211 (339)
T cd06603 132 PEVRDWWASLFSYDKYKGSTENLYIWNDMNEPSVFNGPELTMPKDAIHYGGIEHREVHNIYGLYMHMATFDGLLKRSEGN 211 (339)
T ss_pred hhHHHHHHHHHHHHhhcccCCCceEEeccCCccccCCCCCcCCCcceecCCCcHHHHhhHhHHHHHHHHHHHHHHhhccC
Confidence 1123333344444 2 589999999864310 011 12232 233445432
Q ss_pred CCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCCCCCCCCcceeCCCCCCchhhHHH
Q 040445 161 GRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGWNDPDMLEVGNGGMKYNEYVVH 240 (358)
Q Consensus 161 gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~wnDpDmL~vG~~~lt~~E~rt~ 240 (358)
.|+++++-+.|... ..++-.| ++|+..+|+.+..++....... ..|-..|. +| +-|..+-...|-..+
T Consensus 212 ~r~~~~sRs~~~G~------qry~~~W--~GD~~s~W~~L~~~i~~~L~~~-l~G~~~~g-~D--iGGf~~~~~~EL~~R 279 (339)
T cd06603 212 KRPFVLTRSFFAGS------QRYAAIW--TGDNTATWEHLKISIPMLLSLN-ICGIPFCG-AD--VGGFFGNPDEELLVR 279 (339)
T ss_pred CceEEEEecccccc------cceeeee--CCCccCCHHHHHHHHHHHHHHh-hcCccccC-Cc--cCCcCCCCCHHHHHH
Confidence 47888886655322 3555678 9999999998877765422221 12222221 11 111112234566666
Q ss_pred HHHHHHhcCCeeec
Q 040445 241 FSIWAISKAPLLLG 254 (358)
Q Consensus 241 ~tlwai~~sPLiig 254 (358)
-.-++++ +|++-.
T Consensus 280 W~Q~gaf-~P~~R~ 292 (339)
T cd06603 280 WYQAGAF-YPFFRA 292 (339)
T ss_pred HHHHhhc-Cceeec
Confidence 5555665 577654
No 30
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=96.90 E-value=0.037 Score=54.17 Aligned_cols=151 Identities=15% Similarity=0.185 Sum_probs=85.2
Q ss_pred ceeecCCCCCCChHHHHHHHHHH------------------c-C-------------C---------------------c
Q 040445 90 NLVANKTTFPSGTKALADYVHIL------------------I-S-------------N---------------------S 116 (358)
Q Consensus 90 ~~~~~~~~FP~Glk~l~d~ih~~------------------Y-~-------------G---------------------s 116 (358)
.+..|+++||+ .+.|+++||++ | . | +
T Consensus 62 ~f~~d~~~FPd-p~~mi~~Lh~~G~~~~~~i~P~v~~~~~~~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a 140 (317)
T cd06594 62 NWEWDPERYPG-LDELIEELKARGIRVLTYINPYLADDGPLYYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAA 140 (317)
T ss_pred eeEEChhhCCC-HHHHHHHHHHCCCEEEEEecCceecCCchhHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHH
Confidence 47999999998 99999999998 1 1 1 1
Q ss_pred hhhHHHHHHH-H-hhCccEEEeecCCCC--------CCc---hhHHHHH-H----HHHHHHh---CCCcEEeecCCCCCC
Q 040445 117 LDNRIESNIA-F-EQGIDYLKYDNCFND--------DTR---PTIRYRA-M----SDALKKA---GRPIFFSMCEWGDMR 175 (358)
Q Consensus 117 ~~~~~~da~~-f-~WGvDylK~D~c~~~--------~~~---~~~~y~~-m----~~AL~~~---gr~i~ls~c~wg~~~ 175 (358)
..+....++. + +.|||.+|.|+.-.. +.+ .+..|.. | .+++++. +|+++++-+.+...
T Consensus 141 ~~ww~~~~~~~~~~~Gvdg~w~D~~E~~p~d~~~~~g~~~~~~hN~y~~~~~~~~~~~~~~~~~~~r~fvltRs~~~Gs- 219 (317)
T cd06594 141 RDWFKQVIKEMLLDLGLSGWMADFGEYLPFDAVLHSGEDAATMHNRYPELWAKLNREAVEEAGKTGDILFFMRSGFTGS- 219 (317)
T ss_pred HHHHHHHHHHHhhhcCCcEEEecCCCCCCCcceecCCCCHHHHhhHHHHHHHHHHHHHHHHhccCCCeEEEEccccccc-
Confidence 2333334443 4 889999999985431 111 1222332 2 3344443 57888886654321
Q ss_pred cccccccccC-EEeecCCCCCchH---HHHHHHHHhcccccccCCCCCCCCCcceeCC-----CCCCchhhHHHHHHHHH
Q 040445 176 PALWGSNIRN-SWRTTDDISDSWA---RMLTIADMNEVYADHAKPGGWNDPDMLEVGN-----GGMKYNEYVVHFSIWAI 246 (358)
Q Consensus 176 p~~w~~~~~~-~wRis~Di~~~W~---~~~~~~~~~~~~~~~~~pg~wnDpDmL~vG~-----~~lt~~E~rt~~tlwai 246 (358)
..|+. .| +.|+..+|+ .+..++....... ..|-..| =+| ||. .+.+.+|--++-.-+++
T Consensus 220 -----qry~~~~W--sGD~~s~W~~~~~L~~~i~~~L~~~-lsG~~~~-g~D---IGGF~~~~~~~~~~EL~~RW~Q~ga 287 (317)
T cd06594 220 -----QKYSTLFW--AGDQMVSWDAHDGLKSVVPGALSSG-LSGYALH-HSD---IGGYTSLNGYVRTEELLLRWAEMAA 287 (317)
T ss_pred -----cccccccc--CCCCCCCCcCcccHHHHHHHHhhcc-ccCCCcc-cCc---cCCCcCCCCCCCCHHHHHHHHHHhc
Confidence 35654 47 899999998 4665554322221 1121122 112 121 12356677777555555
Q ss_pred hcCCeeecc
Q 040445 247 SKAPLLLGC 255 (358)
Q Consensus 247 ~~sPLiig~ 255 (358)
+ .|++=..
T Consensus 288 F-~P~~R~H 295 (317)
T cd06594 288 F-TPVMRTH 295 (317)
T ss_pred c-ccceecC
Confidence 5 4666543
No 31
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=96.79 E-value=0.025 Score=62.71 Aligned_cols=110 Identities=20% Similarity=0.252 Sum_probs=73.8
Q ss_pred CCceeecCCCCCCChHHHHHHHHHH-----------------cC--------------------------C---------
Q 040445 88 QGNLVANKTTFPSGTKALADYVHIL-----------------IS--------------------------N--------- 115 (358)
Q Consensus 88 ~G~~~~~~~~FP~Glk~l~d~ih~~-----------------Y~--------------------------G--------- 115 (358)
++.+..|+++||+ .+.|++.||++ |. |
T Consensus 230 ~~~FTwD~~rFPd-P~~mv~~Lh~~G~kvv~iidPgI~~d~gY~~y~eg~~~~~fvk~~~G~~y~G~vWpG~~~fpDFTn 308 (978)
T PLN02763 230 FRCFTFDKERFPD-PKGLADDLHSIGFKAIWMLDPGIKAEEGYFVYDSGCENDVWIQTADGKPFVGEVWPGPCVFPDFTN 308 (978)
T ss_pred CCceeECcccCCC-HHHHHHHHHHCCCEEEEEEcCCCccCCCCHHHHhHhhcCeeEECCCCCeeEeeecCCCccccCCCC
Confidence 4789999999997 99999999998 10 1
Q ss_pred --chhhHHHHHHHH-hhCccEEEeecCCCCC----------------------C-c---hhHHHH-HHH----HHHHHh-
Q 040445 116 --SLDNRIESNIAF-EQGIDYLKYDNCFNDD----------------------T-R---PTIRYR-AMS----DALKKA- 160 (358)
Q Consensus 116 --s~~~~~~da~~f-~WGvDylK~D~c~~~~----------------------~-~---~~~~y~-~m~----~AL~~~- 160 (358)
+..|.....+.| +.|||.++.|++-+.. . . .+..|. .|. +++++.
T Consensus 309 P~ar~WW~~~~k~l~d~GVDG~W~DmnEPa~f~~~~~t~P~~~~h~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~ 388 (978)
T PLN02763 309 KKTRSWWANLVKDFVSNGVDGIWNDMNEPAVFKTVTKTMPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLAN 388 (978)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEccCCCCccccCCcCCCCccccccCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhC
Confidence 234555666778 8999999999964310 0 0 012222 122 334332
Q ss_pred --CCCcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHHHHH
Q 040445 161 --GRPIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTIADM 206 (358)
Q Consensus 161 --gr~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~ 206 (358)
.||++++-+.+... ..|+-.| ++|...+|+.+...+..
T Consensus 389 ~~kRPFilTRSgfaGs------QRYaa~W--tGDn~SsWe~L~~sI~~ 428 (978)
T PLN02763 389 KNKRPFVLTRAGFIGS------QRYAATW--TGDNLSNWEHLHMSIPM 428 (978)
T ss_pred CCCCcEEEEccccCcC------CCCceEE--CCCccCCHHHHHHHHHH
Confidence 48999986665322 3566788 99999999988766643
No 32
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=96.52 E-value=0.11 Score=51.21 Aligned_cols=79 Identities=23% Similarity=0.242 Sum_probs=48.1
Q ss_pred HHHHHHHH--hhCccEEEeecCCCC---------CCc--------hhHHHHHHHHHHHHhC-CCcEEeecCCCCCCcccc
Q 040445 120 RIESNIAF--EQGIDYLKYDNCFND---------DTR--------PTIRYRAMSDALKKAG-RPIFFSMCEWGDMRPALW 179 (358)
Q Consensus 120 ~~~da~~f--~WGvDylK~D~c~~~---------~~~--------~~~~y~~m~~AL~~~g-r~i~ls~c~wg~~~p~~w 179 (358)
.....+.+ +.|||.+|.|+.-.. +.. +..-.+++.+++++.+ |+++++-+.|...
T Consensus 165 w~~~~~~~~~~~Gidg~w~D~~E~~~~~~~~~~~g~~~~~~hN~y~~~~~~~~~e~~~~~~~r~filtRs~~~Gs----- 239 (340)
T cd06597 165 WMEKRRYLVDELGIDGFKTDGGEHVWGRDLHFRDGRRGDEMRNTYPNHYVRAYNDFLRRAKKDGVTFSRAGYTGA----- 239 (340)
T ss_pred HHHHHHHHHHhcCCcEEEecCCCccCCCCceecCCCcHHHhhcccHHHHHHHHHHHHHhccCCcEEEEecccCcc-----
Confidence 34445555 699999999975321 111 1111123444555544 7888886665322
Q ss_pred cccccCEEeecCCCCCchHHHHHHHHH
Q 040445 180 GSNIRNSWRTTDDISDSWARMLTIADM 206 (358)
Q Consensus 180 ~~~~~~~wRis~Di~~~W~~~~~~~~~ 206 (358)
..++-.| ++|+..+|+.+..++..
T Consensus 240 -qry~~~W--sGD~~s~W~~L~~~i~~ 263 (340)
T cd06597 240 -QAHGIFW--AGDENSTFGAFRWSVFA 263 (340)
T ss_pred -CCCccee--cCCCCCCHHHHHHHHHH
Confidence 2445567 99999999988777654
No 33
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=95.71 E-value=0.18 Score=47.84 Aligned_cols=139 Identities=19% Similarity=0.260 Sum_probs=83.7
Q ss_pred ChHHHHHHHHHH--cCC--chhhHHHHHHHH-hhCccEEEeecCCCCCCc--hhHHHHHHHHHHHH--hCCCcEEeecCC
Q 040445 101 GTKALADYVHIL--ISN--SLDNRIESNIAF-EQGIDYLKYDNCFNDDTR--PTIRYRAMSDALKK--AGRPIFFSMCEW 171 (358)
Q Consensus 101 Glk~l~d~ih~~--Y~G--s~~~~~~da~~f-~WGvDylK~D~c~~~~~~--~~~~y~~m~~AL~~--~gr~i~ls~c~w 171 (358)
-|+.++||++++ ..| .+.-.+...+.. .=|+.++|+|--..+..+ +....++..+++++ ..||++++-|.|
T Consensus 76 ~l~~~~~~~~~~g~~~glwt~~~l~~~~~ev~~~g~~~~k~Dv~w~g~gy~~~l~~~ka~yeg~~~~~~~RpfiltRsg~ 155 (261)
T cd06596 76 NLKEVVDYLHANGVETGLWTQSGLRDIAKEVGAAGVRARKTDVAWVGAGYSFALNGVKAAADGIESNSNARPFIVTVDGW 155 (261)
T ss_pred HHHHHHHHHHHcCCccccccccchhhhhhhhccCCceEEeccchhhccchhHHHHHHHHHHHHHHhCCCCCCEEEEecCc
Confidence 389999999988 445 455556666667 789999999976443221 11222223334433 358999998877
Q ss_pred CCCCcccccccccCEEeecCCCCCchHHHHHHHHHhcccccccCCCCC-CCCCcceeCCCCCCchhhHHHHHHHHHhcCC
Q 040445 172 GDMRPALWGSNIRNSWRTTDDISDSWARMLTIADMNEVYADHAKPGGW-NDPDMLEVGNGGMKYNEYVVHFSIWAISKAP 250 (358)
Q Consensus 172 g~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~~~~~~~~~~~~~pg~w-nDpDmL~vG~~~lt~~E~rt~~tlwai~~sP 250 (358)
... ..++-.| ++|+..+|+.+...+...... ...|...| .|.+=+ .| + ..|--++-.-|+++ .|
T Consensus 156 aGs------QRy~~~W--sGD~~stWe~Lr~sI~~~L~~-gLsG~p~~G~DIGGF-~g--~--~~EL~vRW~Q~gaF-~P 220 (261)
T cd06596 156 AGT------QRYAGIW--TGDQSGSWEYIRFHIPTYIGS-GLSGQPNTTSDVDGI-FG--G--SPETYTRDLQWKAF-TP 220 (261)
T ss_pred ccc------CCCCCcc--CCCCcCcHHHHHHHHHHHHHH-HhcCCCcCccccCcC-CC--C--CHHHHHHHHHHHHh-hh
Confidence 432 2556678 999999999987776543322 12222222 232211 12 2 45777776666766 57
Q ss_pred eeec
Q 040445 251 LLLG 254 (358)
Q Consensus 251 Liig 254 (358)
++..
T Consensus 221 ~~R~ 224 (261)
T cd06596 221 VLMT 224 (261)
T ss_pred hhhh
Confidence 7754
No 34
>PF02806 Alpha-amylase_C: Alpha amylase, C-terminal all-beta domain; InterPro: IPR006048 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This entry represents the all-beta domain that is found in several alpha-amylases, usually at the C terminus, and which forms a Greek key beta-barrel fold in these enzymes []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 1TCM_A 1CXL_A 1PJ9_A 1OT2_A 2DIJ_A 1CGV_A 1CXK_A 1PEZ_A 1CGX_A 2CXG_A ....
Probab=95.35 E-value=0.1 Score=41.28 Aligned_cols=70 Identities=13% Similarity=0.157 Sum_probs=43.6
Q ss_pred CCeEEEEEEcCCCcEEEEEEeCCCCceEEEEEccccccc-ccc--ccccCccc--ce-----------eecceEEEEEcC
Q 040445 281 NDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIK-SNN--TLFEHRTL--ET-----------KFQGKLTAKVDG 344 (358)
Q Consensus 281 ~~~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~-~~~--DlW~g~~~--~g-----------~~~g~~~~~l~p 344 (358)
..+-+|.|.-.++...|+++|.+++....++ .+|++ ++. ++.+..+. +| ...|.++++|||
T Consensus 9 ~~v~af~R~~~~~~~~lvv~Nf~~~~~~~~~---~~~~p~~g~y~~vlnsd~~~~~g~~~~~~~~v~~~~~g~~~~~lp~ 85 (95)
T PF02806_consen 9 NNVIAFERKDKGDDRVLVVFNFSPEAVYEDY---RIGVPEAGRYKEVLNSDDEEYGGSGKGNSGEVTVDSNGRITVTLPP 85 (95)
T ss_dssp SSEEEEEETTTETTEEEEEEESSSS-EEEEE---EECSSSSEEEEETTTTTCEEEEESSCSETSEEEEETTSEEEEEEST
T ss_pred CCEEEEEEcCCCCCEEEEEEECCCcccceeE---EeCCCCcceeeEEeCCCccEECCcccccCceEEEeeCCEEEEEECC
Confidence 4466777764332378999999887444333 34544 222 55554321 11 125678999999
Q ss_pred CcEEEEEEe
Q 040445 345 HSCKMYELT 353 (358)
Q Consensus 345 h~~~llrl~ 353 (358)
.++++||++
T Consensus 86 ~s~~vl~~~ 94 (95)
T PF02806_consen 86 YSALVLKLK 94 (95)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEc
Confidence 999999986
No 35
>PF08533 Glyco_hydro_42C: Beta-galactosidase C-terminal domain; InterPro: IPR013739 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found at the C terminus of beta-galactosidase enzymes that belong to the glycosyl hydrolase 42 family []. ; GO: 0004565 beta-galactosidase activity; PDB: 1KWK_A 1KWG_A.
Probab=94.77 E-value=0.045 Score=39.82 Aligned_cols=55 Identities=11% Similarity=0.100 Sum_probs=28.4
Q ss_pred EEEEEEcCCCcEEEEEEeCCCCceEEEEEccccccccccccccCcccceeecceEEEEEcCCcEEEEE
Q 040445 284 QIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYE 351 (358)
Q Consensus 284 ~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~DlW~g~~~~g~~~g~~~~~l~ph~~~llr 351 (358)
+|=.| -.++..++.++|.++++++++++ . ...||.+++.. ++. ++|+|++++++|
T Consensus 3 ev~~R-~~~~~~y~F~~N~s~~~~~v~l~--~----~~~dll~g~~~----~~~--~~L~p~~v~Vl~ 57 (58)
T PF08533_consen 3 EVTVR-ENDGGRYLFLLNFSDEPQTVTLP--E----SYTDLLTGETV----SGG--LTLPPYGVRVLK 57 (58)
T ss_dssp EEEE-----ETTEEEEEE-SSS-EE------T----T-EEEES-------------SEE-TTEEEEEE
T ss_pred EEEEE-EcCCCEEEEEEECCCCCEEEEcC--C----CceecccCcce----eeE--EEECCCEEEEEE
Confidence 34344 33445689999999999998862 1 22399999854 333 799999999997
No 36
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=93.66 E-value=0.31 Score=51.14 Aligned_cols=67 Identities=6% Similarity=-0.004 Sum_probs=47.9
Q ss_pred eEEEEEEcCCCcEEEEEEeCCCCceEEEEEccccccccc--cccccCcccceeecceEEEEEcCCcEEEEEE
Q 040445 283 QQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSN--NTLFEHRTLETKFQGKLTAKVDGHSCKMYEL 352 (358)
Q Consensus 283 ~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~--~DlW~g~~~~g~~~g~~~~~l~ph~~~llrl 352 (358)
+-++.+... +..+|+++|.+++++++++++..+ .+. .|+.+++.......+.++++|+|+++.+|||
T Consensus 470 v~~f~R~~~-~~~vlVv~N~s~~~~~v~l~~~~~--~~~~~~dl~~~~~~~~~~~~~~~~~l~p~~~~~~~~ 538 (539)
T TIGR02456 470 VLAFLREYE-GERVLCVFNFSRNPQAVELDLSEF--AGRVPVELIGGAPFPPVGGDGYLLTLGPHGFYWFRL 538 (539)
T ss_pred EEEEEEEcC-CcEEEEEEeCCCCCEEeecccccc--ccCcceecccCCccccccCCcceEEECCceEEEEEe
Confidence 455556655 457899999999999988877653 222 2898888541122235889999999999995
No 37
>PRK10426 alpha-glucosidase; Provisional
Probab=93.62 E-value=1.2 Score=47.76 Aligned_cols=108 Identities=12% Similarity=0.154 Sum_probs=68.8
Q ss_pred CceeecCCCCCCChHHHHHHHHHH------------------cC-------------C---------------------c
Q 040445 89 GNLVANKTTFPSGTKALADYVHIL------------------IS-------------N---------------------S 116 (358)
Q Consensus 89 G~~~~~~~~FP~Glk~l~d~ih~~------------------Y~-------------G---------------------s 116 (358)
+++..|+++||+ .+.+++.||++ |. | +
T Consensus 259 ~~~~~d~~~FPd-p~~mi~~L~~~G~k~v~~i~P~v~~~~~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~a 337 (635)
T PRK10426 259 WNWKWDSERYPQ-LDSRIKQLNEEGIQFLGYINPYLASDGDLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEA 337 (635)
T ss_pred ccceEChhhCCC-HHHHHHHHHHCCCEEEEEEcCccCCCCHHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHH
Confidence 467889999998 99999999998 10 1 2
Q ss_pred hhhHHHHH-HHH-hhCccEEEeecCCC--------CCCch---hHHHH-----HHHHHHHHh---CCCcEEeecCCCCCC
Q 040445 117 LDNRIESN-IAF-EQGIDYLKYDNCFN--------DDTRP---TIRYR-----AMSDALKKA---GRPIFFSMCEWGDMR 175 (358)
Q Consensus 117 ~~~~~~da-~~f-~WGvDylK~D~c~~--------~~~~~---~~~y~-----~m~~AL~~~---gr~i~ls~c~wg~~~ 175 (358)
..+....+ +.+ +.|||.+|.|+.-. .+..+ +-.|. ...+++++. +|+++++-+.+...
T Consensus 338 r~Ww~~~~~~~~~~~Gvdg~w~D~~E~~p~d~~~~~g~~~~~~hN~Y~~l~~~~~~e~~~~~~~~~r~f~ltRsg~aGs- 416 (635)
T PRK10426 338 YEWFKEVIKKNMIGLGCSGWMADFGEYLPTDAYLHNGVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGYTGS- 416 (635)
T ss_pred HHHHHHHHHHHHhhcCCCEEeeeCCCCCCCcceeeCCCCHHHhccHHHHHHHHHHHHHHHHhcCCCCcEEEEccccCCc-
Confidence 34454555 456 99999999998542 11111 12232 223444443 58888876554221
Q ss_pred cccccccccC-EEeecCCCCCchH---HHHHHHH
Q 040445 176 PALWGSNIRN-SWRTTDDISDSWA---RMLTIAD 205 (358)
Q Consensus 176 p~~w~~~~~~-~wRis~Di~~~W~---~~~~~~~ 205 (358)
..|+. .| ++|...+|+ .+...+.
T Consensus 417 -----Qry~~~~W--sGD~~ssW~~~d~L~~~I~ 443 (635)
T PRK10426 417 -----QKYSTLFW--AGDQNVDWSLDDGLASVVP 443 (635)
T ss_pred -----CCcccccc--CCCCCCcCcChhHHHHHHH
Confidence 35654 58 999999995 5555544
No 38
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=92.86 E-value=0.32 Score=46.64 Aligned_cols=65 Identities=18% Similarity=0.121 Sum_probs=40.3
Q ss_pred ChHHHHHHHHHH------cC---C------chhhHHHHHHHH-hhCccEEEeecCCCCCCchhHHHHHHHHHHHH-hCCC
Q 040445 101 GTKALADYVHIL------IS---N------SLDNRIESNIAF-EQGIDYLKYDNCFNDDTRPTIRYRAMSDALKK-AGRP 163 (358)
Q Consensus 101 Glk~l~d~ih~~------Y~---G------s~~~~~~da~~f-~WGvDylK~D~c~~~~~~~~~~y~~m~~AL~~-~gr~ 163 (358)
-|+.|++|-++| +. + -....+.-++++ +|||.=||+||...++ ++..+-..+.+++ +.+.
T Consensus 74 dl~elv~Ya~~KgVgi~lw~~~~~~~~~~~~~~~~~~~f~~~~~~Gv~GvKidF~~~d~---Q~~v~~y~~i~~~AA~~~ 150 (273)
T PF10566_consen 74 DLPELVDYAKEKGVGIWLWYHSETGGNVANLEKQLDEAFKLYAKWGVKGVKIDFMDRDD---QEMVNWYEDILEDAAEYK 150 (273)
T ss_dssp -HHHHHHHHHHTT-EEEEEEECCHTTBHHHHHCCHHHHHHHHHHCTEEEEEEE--SSTS---HHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCEEEEEeCCcchhhHhHHHHHHHHHHHHHHcCCCEEeeCcCCCCC---HHHHHHHHHHHHHHHHcC
Confidence 499999999999 11 1 112247778889 9999999999998754 4444444444443 3445
Q ss_pred cEEee
Q 040445 164 IFFSM 168 (358)
Q Consensus 164 i~ls~ 168 (358)
+++..
T Consensus 151 Lmvnf 155 (273)
T PF10566_consen 151 LMVNF 155 (273)
T ss_dssp -EEEE
T ss_pred cEEEe
Confidence 55553
No 39
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type. Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits.
Probab=91.70 E-value=1.1 Score=47.92 Aligned_cols=73 Identities=5% Similarity=-0.078 Sum_probs=56.2
Q ss_pred eEEEEEEcCC-CcEEEEEEeCCCCceEEEEEccccccccccccccCccccee-ecceEEEEEcCCcEEEEEEeec
Q 040445 283 QQIWAGPLSG-NRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETK-FQGKLTAKVDGHSCKMYELTPV 355 (358)
Q Consensus 283 ~~vw~~~l~d-g~~av~l~N~~~~~~~~tv~l~~lGl~~~~DlW~g~~~~g~-~~g~~~~~l~ph~~~llrl~~~ 355 (358)
+-+.+..+.+ +...|++.|++.+++.++|++..+--....|+..+...+.. ..+.++++|+||+-.-|++...
T Consensus 610 vLa~v~~l~~~~~~~L~v~Nfs~~~~~~~l~l~~~~~~~~~dl~~~~~~~~~~~~~~~~i~L~~y~~~wl~~~~~ 684 (688)
T TIGR02455 610 LLVMVHELPAGKGIQITALNFGADAIAEEICLPGFAPGPVVDIIHESVEGDLTDDCELMINLDPYEALALRIVNA 684 (688)
T ss_pred EEEEEEEcCCCCceEEEeeccCCCCeeeEEeccccCCCCceeccCCCccCCcCCCceeEEEecCcceEEEEeccc
Confidence 4466677764 47899999999999999999987632222399999986322 4568999999999999998654
No 40
>PF10438 Cyc-maltodext_C: Cyclo-malto-dextrinase C-terminal domain; InterPro: IPR019492 This domain is at the very C terminus of cyclo-malto-dextrinase proteins and consists of 8 beta strands, is largely globular and appears to help stabilise the active sites created by upstream domains, IPR015171 from INTERPRO, and IPR006047 from INTERPRO. Cyclo-malto-dextrinases hydrolyse cyclodextrans to maltose and glucose and catalyse trans-glycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. ; PDB: 3EDK_B 3EDD_A 3EDJ_B 3EDE_A 1H3G_B 3EDF_B.
Probab=91.35 E-value=0.68 Score=35.98 Aligned_cols=64 Identities=14% Similarity=0.249 Sum_probs=40.4
Q ss_pred CeEEEEEEcCCCcEEEEEEeCCCCceEEEEEcccc----c-cccccccccCcccceeecceEEEEEcCCcEEEEEE
Q 040445 282 DQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDI----G-IKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYEL 352 (358)
Q Consensus 282 ~~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~l----G-l~~~~DlW~g~~~~g~~~g~~~~~l~ph~~~llrl 352 (358)
++-|+.|...+ ..++++.|-++++ .++++++. + .....|+-+|+.+ ..+. +++|+|.++.++.+
T Consensus 10 gvYvYfR~~~~-~tVmVilN~n~~~--~~ldl~ry~E~l~~~~~~~diltg~~i--~l~~--~l~l~~~~~~ILel 78 (78)
T PF10438_consen 10 GVYVYFRYYDG-KTVMVILNKNDKE--QTLDLKRYAEVLGGFTSAKDILTGKTI--DLSK--NLTLPPKSVLILEL 78 (78)
T ss_dssp TEEEEEEEESS-EEEEEEEE-SSS---EEEEGGGGHHHHTT--EEEETTT--EE--E-SS--EEEE-TTEEEEEEE
T ss_pred CEEEEEEEcCC-CEEEEEEcCCCCC--eEEcHHHHHHhhCCCcceEECCCCCEE--ecCC--cEEECCCceEEEEC
Confidence 56788887655 4789999988766 45566554 2 2333399999976 4444 67999999999875
No 41
>PF11941 DUF3459: Domain of unknown function (DUF3459); InterPro: IPR022567 This functionally uncharacterised domain is found in bacteria. It is about 110 amino acids in length and is found C-terminal to PF00128 from PFAM, PF02922 from PFAM. ; GO: 0033942 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase activity; PDB: 2WC7_A 2WCS_A 2WKG_A 3M07_A 2PWD_A 1ZJB_A 2PWF_C 2PWE_A 2PWG_A 2PWH_A ....
Probab=88.50 E-value=1.5 Score=33.91 Aligned_cols=54 Identities=9% Similarity=0.039 Sum_probs=31.1
Q ss_pred EEEcCCCcEEEEEEeCCCCceEEEEEccccccccccccccCcccceeecceEEEEEcCCcEEEE
Q 040445 287 AGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMY 350 (358)
Q Consensus 287 ~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~DlW~g~~~~g~~~g~~~~~l~ph~~~ll 350 (358)
.....++...++++|.+++++++. +-....-+|+.... ...+ .++|+||+++++
T Consensus 36 ~~r~~~~~~l~v~~Nls~~~~~~~------~~~~~~~l~~s~~~--~~~~--~~~L~p~~~~v~ 89 (89)
T PF11941_consen 36 FRRTGGGERLLVAFNLSDEPVTVP------EGPWGEVLFSSEPA--RAGG--AGTLPPWSVVVL 89 (89)
T ss_dssp EEEEETTEEEEEEEE-SSS-EEEE------TSCCEEEEEECSCS--SE----EEEE-TTEEEEE
T ss_pred EEEEcCCceEEEEEecCCCcEEcc------CCCCCeEEEcCCCc--cccc--CceECCCEEEEC
Confidence 344456678999999999888877 11111134443321 2222 789999999875
No 42
>smart00632 Aamy_C Aamy_C domain.
Probab=85.55 E-value=6.8 Score=30.17 Aligned_cols=60 Identities=10% Similarity=0.061 Sum_probs=38.6
Q ss_pred eEEEEEEcCCCcEEEEEEeCCCCceEEEEEcccccccccc--cccc----Ccccceee-cceEEEEEcCCcEEEE
Q 040445 283 QQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNN--TLFE----HRTLETKF-QGKLTAKVDGHSCKMY 350 (358)
Q Consensus 283 ~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~--DlW~----g~~~~g~~-~g~~~~~l~ph~~~ll 350 (358)
.-+|.| |+..++++|.+...+++++. -+|+.+. |+-+ ++.+ ... .|..+++|||++++++
T Consensus 10 ~laF~R----g~~g~VaiN~~~~~~~~~~~---t~lp~G~Y~d~l~g~~~g~~v-~V~~~G~~~~~l~~~~~v~i 76 (81)
T smart00632 10 QIAFER----GSKGFVAINRSDSDLTITLQ---TSLPAGTYCDVISGLCTGKSV-TVGSNGIATFTLPAGGAVAI 76 (81)
T ss_pred EEEEEC----CCeEEEEEECCCCceEEEEe---ecCCCcceEEEecCcccCCEE-EECCCCEEEEEECCCCeEEE
Confidence 455555 45678888998776666653 2354343 7777 4444 233 5788899999995443
No 43
>PF14509 GH97_C: Glycosyl-hydrolase 97 C-terminal, oligomerisation; PDB: 3A24_A 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A.
Probab=84.84 E-value=7.2 Score=31.87 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=42.8
Q ss_pred CCeEEEEEEcC-CCcEEEEEEeCCCCceEEEEEcccccccccc--ccccCcc---------cc-----eeecceEEEEEc
Q 040445 281 NDQQIWAGPLS-GNRIVVLLESRKTFSSMMTAHWDDIGIKSNN--TLFEHRT---------LE-----TKFQGKLTAKVD 343 (358)
Q Consensus 281 ~~~~vw~~~l~-dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~--DlW~g~~---------~~-----g~~~g~~~~~l~ 343 (358)
+..-|..|.-. +++++|+..|-.+ +++++|+|+.|+-.... .+++... +. ....+++++.|.
T Consensus 14 GeyvviARr~~~G~~Wyvg~in~~~-~r~i~l~L~FL~~g~~y~a~i~~D~~~a~~~~~~~~~~~~~~v~~~~~l~i~l~ 92 (103)
T PF14509_consen 14 GEYVVIARRKRDGDDWYVGGINGED-ARTITLPLSFLDKGKKYTATIYTDGPDADYTNPEAYKIETRKVTSGDKLTITLA 92 (103)
T ss_dssp TTEEEEEEEETTTTEEEEEEEE-TT--EEEEEEGCCS-TT--EEEEEEEE-TTTCTTCTT-EEEEEEEE-TT-EEEEEE-
T ss_pred ceEEEEEEEcCCCCCEEEEEeeCCC-ceEEEEECcccCCCCcEEEEEEEeCCcccccCCcceEEEEEEECCCCEEEEEEe
Confidence 34456666653 5689999999765 45599999998643111 2222111 10 122468999999
Q ss_pred CCcEEEEEEee
Q 040445 344 GHSCKMYELTP 354 (358)
Q Consensus 344 ph~~~llrl~~ 354 (358)
|+|-.+++|+|
T Consensus 93 ~~GG~vi~~~p 103 (103)
T PF14509_consen 93 PGGGFVIRITP 103 (103)
T ss_dssp TT-EEEEEEEE
T ss_pred CCCcEEEEEEC
Confidence 99999999986
No 44
>PF09260 DUF1966: Domain of unknown function (DUF1966); InterPro: IPR015340 Alpha-amylase is classified as family 13 of the glycosyl hydrolases and is present in archaea, bacteria, plants and animals. Alpha-amylase is an essential enzyme in alpha-glucan metabolism, acting to catalyse the hydrolysis of alpha-1,4-glucosidic bonds of glycogen, starch and related polysaccharides. Although all alpha-amylases possess the same catalytic function, they can vary with respect to sequence. In general, they are composed of three domains: a TIM barrel containing the active site residues and chloride ion-binding site (domain A), a long loop region inserted between the third beta strand and the alpha-helix of domain A that contains calcium-binding site(s) (domain B), and a C-terminal beta-sheet domain that appears to show some variability in sequence and length between amylases (domain C) []. Amylases have at least one conserved calcium-binding site, as calcium is essential for the stability of the enzyme. The chloride-binding functions to activate the enzyme, which acts by a two-step mechanism involving a catalytic nucleophile base (usually an Asp) and a catalytic proton donor (usually a Glu) that are responsible for the formation of the beta-linked glycosyl-enzyme intermediate. This domain is found in various fungal alpha-amylase proteins. Its exact function has not, as yet, been defined []. ; GO: 0004556 alpha-amylase activity, 0005509 calcium ion binding, 0016052 carbohydrate catabolic process; PDB: 2AAA_A 2GUY_A 2TAA_B 6TAA_A 2GVY_B 7TAA_A 3KWX_A.
Probab=81.94 E-value=5.5 Score=31.81 Aligned_cols=69 Identities=12% Similarity=0.199 Sum_probs=39.2
Q ss_pred EEEEEEcCCCcEEEEEEeCCC-CceEEEEEcccccccccc---ccccCcccceeecceEEEEEcCCcEEEEEE
Q 040445 284 QIWAGPLSGNRIVVLLESRKT-FSSMMTAHWDDIGIKSNN---TLFEHRTLETKFQGKLTAKVDGHSCKMYEL 352 (358)
Q Consensus 284 ~vw~~~l~dg~~av~l~N~~~-~~~~~tv~l~~lGl~~~~---DlW~g~~~~g~~~g~~~~~l~ph~~~llrl 352 (358)
-++.|.-.+....+++.|.++ .....+++++..|+++.. ||++.+..-.-..|.+++++....-++|--
T Consensus 9 ~a~rKG~~g~qvi~vltN~Gs~~~~~~~~~v~~~~f~~g~~v~dVlsc~~~tv~~~G~l~v~m~~G~P~Vl~P 81 (91)
T PF09260_consen 9 IAFRKGPDGSQVIVVLTNQGSNSGGSYTLTVPNTGFSAGTEVTDVLSCTSYTVDSNGTLTVPMSNGEPRVLYP 81 (91)
T ss_dssp EEEEESSTTT-EEEEEE-S-T-T---EEEEESS----TT-EEEETTTTEEEE--TTS-EEEEESTT--EEEEE
T ss_pred EEEEeCCCCCEEEEEEeCCCcCCCCcEEEEEcCCCCCCCCEEEEEecCCEEEECCCCEEEEEEcCCceEEEEE
Confidence 455555445557777778887 578899999988887665 999999862224778999988877777643
No 45
>PF06964 Alpha-L-AF_C: Alpha-L-arabinofuranosidase C-terminus; InterPro: IPR010720 This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (3.2.1.55 from EC). This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides [].; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process; PDB: 3FW6_A 3II1_A 3S2C_K 1QW9_A 1PZ3_B 1PZ2_B 1QW8_A 3UG4_A 3UG3_A 4ATW_B ....
Probab=81.54 E-value=6.2 Score=34.90 Aligned_cols=28 Identities=14% Similarity=0.208 Sum_probs=22.5
Q ss_pred CCCcEEEEEEeCCCCceEEEEEcccccc
Q 040445 291 SGNRIVVLLESRKTFSSMMTAHWDDIGI 318 (358)
Q Consensus 291 ~dg~~av~l~N~~~~~~~~tv~l~~lGl 318 (358)
.++.++|.++|++.++++++|++..++.
T Consensus 102 ~~~~l~v~vVN~~~~~~~v~l~l~g~~~ 129 (177)
T PF06964_consen 102 DGGELYVKVVNRSSEPQTVTLNLQGFSP 129 (177)
T ss_dssp TTTEEEEEEEE-SSSBEEEEEEETTSTS
T ss_pred CCCEEEEEEEECCCCCEEEEEEEcCCCC
Confidence 3447999999999889999999987654
No 46
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=71.80 E-value=42 Score=36.94 Aligned_cols=27 Identities=22% Similarity=0.318 Sum_probs=24.6
Q ss_pred CCCCCceeecCCCCCCChHHHHHHHHHH
Q 040445 85 NQCQGNLVANKTTFPSGTKALADYVHIL 112 (358)
Q Consensus 85 ~d~~G~~~~~~~~FP~Glk~l~d~ih~~ 112 (358)
+|+|++++.|+.+||. ++.+.|-||++
T Consensus 337 Md~ykDFTvd~~~fp~-~~~fv~~Lh~~ 363 (805)
T KOG1065|consen 337 MDGYKDFTVDKVWFPD-LKDFVDDLHAR 363 (805)
T ss_pred hhcccceeeccccCcc-hHHHHHHHHhC
Confidence 3557999999999998 99999999999
No 47
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=67.33 E-value=21 Score=37.24 Aligned_cols=73 Identities=15% Similarity=-0.000 Sum_probs=43.4
Q ss_pred ccccccchhhHhhhcc------------------CCCeEEEEEEcCCCcEEEEEEeCCCCceEEEEEccccccccccccc
Q 040445 264 TMPIIGNEEVIAVNQA------------------INDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLF 325 (358)
Q Consensus 264 ~l~iL~N~eviavnQd------------------~~~~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~DlW 325 (358)
.-++.++++.-.+-|- ..++++-.=...||+++|+++|.+++++.++|.+.+-.
T Consensus 404 ~~~~~~~p~yY~~gHfSKFV~PGa~RI~st~~~~~~~l~~vAF~nPDGs~vvVv~N~~~~~~~~~v~v~~~~-------- 475 (496)
T PF02055_consen 404 TGEFYKQPEYYAMGHFSKFVRPGAVRIGSTSSSSDSGLEAVAFLNPDGSIVVVVLNRGDSDQNFSVTVKDGS-------- 475 (496)
T ss_dssp GTEEEE-HHHHHHHHHHTTS-TT-EEEEEEESSSTTTEEEEEEEETTSEEEEEEEE-SSS-EEEEEEEECTT--------
T ss_pred CCeEEEcHHHHHHHHHhcccCCCCEEEEeeccCCCCceeEEEEECCCCCEEEEEEcCCCCccceEEEEecCC--------
Confidence 3455667766665554 11244333334789999999999999998777776621
Q ss_pred cCcccceeecceEEEEEcCCcEEEEE
Q 040445 326 EHRTLETKFQGKLTAKVDGHSCKMYE 351 (358)
Q Consensus 326 ~g~~~~g~~~g~~~~~l~ph~~~llr 351 (358)
.....|.++||||.++=+-
T Consensus 476 -------~~~~~~~~~lp~~s~~t~~ 494 (496)
T PF02055_consen 476 -------KGNNHFNVTLPPRSIVTTY 494 (496)
T ss_dssp -------TEE--EEEEEE-TTEEEEE
T ss_pred -------cceeEEEEEeCCCceEEEE
Confidence 1123588999999887543
No 48
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=60.46 E-value=32 Score=32.04 Aligned_cols=46 Identities=22% Similarity=0.359 Sum_probs=35.7
Q ss_pred CchhhHHHHHHHH-hhCccEEEeecCCCCCCchhHHHHHHHHHHHH-hCCCcEEee
Q 040445 115 NSLDNRIESNIAF-EQGIDYLKYDNCFNDDTRPTIRYRAMSDALKK-AGRPIFFSM 168 (358)
Q Consensus 115 Gs~~~~~~da~~f-~WGvDylK~D~c~~~~~~~~~~y~~m~~AL~~-~gr~i~ls~ 168 (358)
|+.+-...-++.+ ++|.|+|=+|.++. ...|++.+++ +|.|++++.
T Consensus 162 ~~~~~l~~Aa~~L~~~gadlIvLDCmGY--------t~~~r~~~~~~~g~PVlLsr 209 (221)
T PF07302_consen 162 GDEEELAAAARELAEQGADLIVLDCMGY--------TQEMRDIVQRALGKPVLLSR 209 (221)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCC--------CHHHHHHHHHHhCCCEEeHH
Confidence 6666667778888 99999999999975 2466666654 799999873
No 49
>PF11852 DUF3372: Domain of unknown function (DUF3372); InterPro: IPR024561 This entry represents the uncharacterised C-terminal domain of secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyse alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. ; PDB: 2Y4S_A 2FH8_A 2FH6_A 2Y5E_A 2FHC_A 2FHB_A 2FHF_A 2FGZ_A.
Probab=54.63 E-value=16 Score=32.62 Aligned_cols=54 Identities=11% Similarity=0.215 Sum_probs=29.9
Q ss_pred cEEEEEEeCCCCceEEEEEcccc-ccccc-------cccccCcccceeecceEEEEEcCCcEEEEEE
Q 040445 294 RIVVLLESRKTFSSMMTAHWDDI-GIKSN-------NTLFEHRTLETKFQGKLTAKVDGHSCKMYEL 352 (358)
Q Consensus 294 ~~av~l~N~~~~~~~~tv~l~~l-Gl~~~-------~DlW~g~~~~g~~~g~~~~~l~ph~~~llrl 352 (358)
+..|++||.+.+++++++. .+ |+.-. .++-..... ...+| +++||++.++||.-
T Consensus 105 ~~iVVvfNat~~~~t~~~~--~~~g~~Lhpvq~~~~D~~v~~a~~-~~~~G--~~tVPa~T~aVFv~ 166 (168)
T PF11852_consen 105 DGIVVVFNATPEEQTFTVP--GLAGFQLHPVQAESSDPVVKQASF-DAANG--TFTVPARTVAVFVQ 166 (168)
T ss_dssp EEEEEEEE-SSS-EEEETG--GGSS-EE-HHHHTGSGTTGGGTEE-ETTTT--EEEE-TTEEEEEEE
T ss_pred CeEEEEEeCCCCeEEEEcC--CcCceEechHHhcccchhhhceeE-ecCCC--eEEECCceEEEEEe
Confidence 4589999999887776654 32 33211 144443322 12245 46899999999863
No 50
>smart00813 Alpha-L-AF_C Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
Probab=52.17 E-value=63 Score=28.84 Aligned_cols=26 Identities=12% Similarity=0.114 Sum_probs=20.4
Q ss_pred CcEEEEEEeCCCC-ceEEEEEcccccc
Q 040445 293 NRIVVLLESRKTF-SSMMTAHWDDIGI 318 (358)
Q Consensus 293 g~~av~l~N~~~~-~~~~tv~l~~lGl 318 (358)
+.+.|.++|++.+ +++++|.+..++.
T Consensus 115 ~~~~v~vvN~~~~~~~~~~l~l~g~~~ 141 (189)
T smart00813 115 GSLTVKVVNRSPEEAVTVTISLRGLKA 141 (189)
T ss_pred CEEEEEEEeCCCCcCEEEEEEecCCcc
Confidence 4678999999754 7899998887653
No 51
>PRK10785 maltodextrin glucosidase; Provisional
Probab=51.09 E-value=56 Score=34.89 Aligned_cols=57 Identities=12% Similarity=0.009 Sum_probs=33.4
Q ss_pred eEEEEEEcCCCcEEEEEEeCCCCceEEEEEcccccccccc-ccccCcccceeecceEEEEEc
Q 040445 283 QQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNN-TLFEHRTLETKFQGKLTAKVD 343 (358)
Q Consensus 283 ~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~-DlW~g~~~~g~~~g~~~~~l~ 343 (358)
+-++.+... +..+++++|.+ +.++++++..+++-...- ++.++... ...+++.++|+
T Consensus 540 v~af~R~~~-~~~vlVviN~s-~~~~v~lp~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 597 (598)
T PRK10785 540 VVVFARVLQ-QQRVLVAINRG-EACEVVLPASPLLNVAQWQRKEGHGDL--TDGGGVILTLP 597 (598)
T ss_pred EEEEEEECC-CCEEEEEEECC-CCeEEecccccccCCcceeeccCceeE--EecCeeEEecC
Confidence 345556554 45789999998 678888887776542222 44444332 23344555554
No 52
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=44.86 E-value=87 Score=33.11 Aligned_cols=64 Identities=3% Similarity=-0.035 Sum_probs=37.9
Q ss_pred eEEEEEEcCCCcEEEEEEeCCCCceEEEEEccccccccccccccCcccceeecceEEEEEcCCcEEEEEE
Q 040445 283 QQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYEL 352 (358)
Q Consensus 283 ~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~DlW~g~~~~g~~~g~~~~~l~ph~~~llrl 352 (358)
+-++.+...+ ..+++++|.++.+++++++ .+ .....++.++... ......+++|+|+++++++-
T Consensus 487 v~af~R~~~~-~~~lvv~N~s~~~~~~~~~--~~-~~~~~~~l~~~~~--~~~~~~~~~L~p~~~~~~~~ 550 (551)
T PRK10933 487 LWCYRREWQG-QTLLVIANLSREPQPWQPG--QM-RGNWQLLMHNYEE--ASPQPCAMTLRPFEAVWWLQ 550 (551)
T ss_pred EEEEEEEcCC-cEEEEEEECCCCCeeeecC--cc-cCCceEEeecCcc--ccCCCCcEEECCCeEEEEEe
Confidence 3455666655 4789999999888777654 11 0111155544211 11111357899999999873
No 53
>COG4288 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=41.47 E-value=75 Score=26.30 Aligned_cols=43 Identities=9% Similarity=0.071 Sum_probs=31.1
Q ss_pred EEEEEeCCCCceEEEEEc--cccccccccccccCcccceeecceEEEEEcCCcEEEEEEee
Q 040445 296 VVLLESRKTFSSMMTAHW--DDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYELTP 354 (358)
Q Consensus 296 av~l~N~~~~~~~~tv~l--~~lGl~~~~DlW~g~~~~g~~~g~~~~~l~ph~~~llrl~~ 354 (358)
-+++.|.+++++++.|.+ ++ + ..-|.+.++|++.-++=+|+.+
T Consensus 32 s~cilN~gDe~AkvrI~i~fsD------------r----~pvgpyevevaarrt~hlRfnd 76 (124)
T COG4288 32 SLCILNTGDEPAKVRITILFSD------------R----EPVGPYEVEVAARRTLHLRFND 76 (124)
T ss_pred eEEEEecCCCCceEEEEEEecc------------C----CCCCceEEEeecceeEEEEecc
Confidence 489999999998766544 44 1 3346778888888888887754
No 54
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=41.40 E-value=85 Score=33.05 Aligned_cols=63 Identities=5% Similarity=-0.007 Sum_probs=37.6
Q ss_pred eEEEEEEcCCCcEEEEEEeCCCCceEEEEEccccccccccccccCcccceeecceEEEEEcCCcEEEEEE
Q 040445 283 QQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDIGIKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYEL 352 (358)
Q Consensus 283 ~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~lGl~~~~DlW~g~~~~g~~~g~~~~~l~ph~~~llrl 352 (358)
+-++.+...+ ..+++++|.++++++++++... .....+.+.... ... .-+++|+|++++++.|
T Consensus 481 v~a~~R~~~~-~~~lVv~N~s~~~~~~~l~~~~---~~~~~~~~~~~~-~~~--~~~~~L~p~~~~i~~~ 543 (543)
T TIGR02403 481 VWAYTRTYKN-QKLLVINNFYGEEKTIELPLDL---LSGKILLSNYEE-AEK--DAKLELKPYEAIVLLI 543 (543)
T ss_pred EEEEEEEcCC-cEEEEEEECCCCCeEeeCCccC---cCceEEEecCCC-cCC--CCcEEECCceEEEEeC
Confidence 4455566554 5789999999887777664321 111133333211 111 1357899999999875
No 55
>COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]
Probab=37.60 E-value=80 Score=32.65 Aligned_cols=65 Identities=12% Similarity=0.150 Sum_probs=42.7
Q ss_pred cCC-CcEEEEEEeCCCCc-eEEEEEcccccc-cccc-ccccCcccc------------------eeec-ceEEEEEcCCc
Q 040445 290 LSG-NRIVVLLESRKTFS-SMMTAHWDDIGI-KSNN-TLFEHRTLE------------------TKFQ-GKLTAKVDGHS 346 (358)
Q Consensus 290 l~d-g~~av~l~N~~~~~-~~~tv~l~~lGl-~~~~-DlW~g~~~~------------------g~~~-g~~~~~l~ph~ 346 (358)
.++ |...+.+.|+..+. .+++|++.-+.- +... -+-+|.++. ...+ +.|+++++|++
T Consensus 413 ~~~~~~l~i~vvN~~~~d~~~~~i~l~G~~~a~~~~~~~lt~~~~~a~Nt~d~p~~V~p~~~~~~~vs~~~l~~~~~~~S 492 (501)
T COG3534 413 DEEGGELTIFVVNRALEDALKLNISLNGLKKAKSAEHQVLTGDDLNATNTFDAPENVVPVPGKGATVSKNELTLDLPPLS 492 (501)
T ss_pred cccCCeEEEEEEeccccccccceEEeccccccceeeEEEEecCccccccCCCCCCceecccCCCccccCCceeEecCCce
Confidence 344 78999999997654 888888877642 1111 222222221 1233 38999999999
Q ss_pred EEEEEEee
Q 040445 347 CKMYELTP 354 (358)
Q Consensus 347 ~~llrl~~ 354 (358)
+.++||..
T Consensus 493 ~~virl~~ 500 (501)
T COG3534 493 VSVIRLKL 500 (501)
T ss_pred EEEEEEec
Confidence 99999975
No 56
>PRK12313 glycogen branching enzyme; Provisional
Probab=36.79 E-value=1.5e+02 Score=31.80 Aligned_cols=74 Identities=8% Similarity=-0.037 Sum_probs=41.5
Q ss_pred eEEEEEEc-CCCcEEEEEEeCCCCceE-EEEEccccc-----cccccccccCcccc---ee---------ecceEEEEEc
Q 040445 283 QQIWAGPL-SGNRIVVLLESRKTFSSM-MTAHWDDIG-----IKSNNTLFEHRTLE---TK---------FQGKLTAKVD 343 (358)
Q Consensus 283 ~~vw~~~l-~dg~~av~l~N~~~~~~~-~tv~l~~lG-----l~~~~DlW~g~~~~---g~---------~~g~~~~~l~ 343 (358)
+-++.+.. .++..+|+++|.++.+.+ ..|.+..-| |.+..+-|.|...+ .. ....+.+.||
T Consensus 539 vlaf~R~~~~~~~~llvv~N~s~~~~~~y~i~~p~~g~~~~ilnsd~~~ygG~~~~~~~~~~~~~~~~~g~~~~~~i~ip 618 (633)
T PRK12313 539 VLSFIRKGKNKGDFLVVVFNFTPVEREDYRIGVPVAGIYEEILNTDSEEFGGSGKGNNGTVKAQEGPWHGRPQSLTLTLP 618 (633)
T ss_pred EEEEEEeCCCCCceEEEEEeCCCCcccceeECCCCCCeEEEEEcCCchhcCCCCcCCCCceeecccccCCCCCEEEEEeC
Confidence 34555654 245568899999876543 555443322 11111233333110 00 1235778999
Q ss_pred CCcEEEEEEeecc
Q 040445 344 GHSCKMYELTPVT 356 (358)
Q Consensus 344 ph~~~llrl~~~~ 356 (358)
|.++++|+..++-
T Consensus 619 ~~s~~v~~~~~~~ 631 (633)
T PRK12313 619 PLGALVLKPKRRL 631 (633)
T ss_pred CCEEEEEEEcccc
Confidence 9999999998764
No 57
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=35.99 E-value=28 Score=35.04 Aligned_cols=127 Identities=17% Similarity=0.087 Sum_probs=70.0
Q ss_pred H-hhCccEEEeecCCC-CCCchhHHHHHHHHHHHHhCC-CcEEeecCCCCCCcccccccccCEEeecCCCCCchHHHHHH
Q 040445 127 F-EQGIDYLKYDNCFN-DDTRPTIRYRAMSDALKKAGR-PIFFSMCEWGDMRPALWGSNIRNSWRTTDDISDSWARMLTI 203 (358)
Q Consensus 127 f-~WGvDylK~D~c~~-~~~~~~~~y~~m~~AL~~~gr-~i~ls~c~wg~~~p~~w~~~~~~~wRis~Di~~~W~~~~~~ 203 (358)
+ +|++.+.|+|.... +.--....|..|.+++.+.|- ++-| -||..| +.|..+.+-
T Consensus 37 w~sW~~f~cniDCv~~pd~cIsE~l~~~~ad~mvseG~~~vGY--------------------~yi~iD--DCW~e~~Rd 94 (414)
T KOG2366|consen 37 WNSWERFRCNIDCVFGPDFCISEQLFKEMADAMVSEGLADVGY--------------------EYINID--DCWSEVTRD 94 (414)
T ss_pred cccccceeeecccccCCccchhHHHHHHHHHHHHHhHHHhcCc--------------------EEEech--hhhhhhccC
Confidence 6 99999999997654 222357789999999876652 2212 233333 334333222
Q ss_pred HHH--hcccccc-cC---CCCCCCCCcceeCC----CC---CCchhhHHHHHHHHHhcCCeeeccCCCCCCccccccccc
Q 040445 204 ADM--NEVYADH-AK---PGGWNDPDMLEVGN----GG---MKYNEYVVHFSIWAISKAPLLLGCDVGNLTAETMPIIGN 270 (358)
Q Consensus 204 ~~~--~~~~~~~-~~---pg~wnDpDmL~vG~----~~---lt~~E~rt~~tlwai~~sPLiig~Dl~~l~~~~l~iL~N 270 (358)
... ...-..+ +| .-.|.+-++|-+|- +. +...+ +.+..|..+.++..-|-|+.+++.-.-.+.++
T Consensus 95 ~~grLva~~~rFP~Gi~~ladyvHs~GLKlGiYsD~G~~TC~g~PG--S~~~e~~DA~tFA~WgvDylKlD~C~~~~~~~ 172 (414)
T KOG2366|consen 95 SDGRLVADPSRFPSGIKALADYVHSKGLKLGIYSDAGNFTCAGYPG--SLGHEESDAKTFADWGVDYLKLDGCFNNLITM 172 (414)
T ss_pred CccccccChhhcccchhhhhhchhhcCCceeeeeccCchhhccCCc--ccchhhhhhhhhHhhCCcEEeccccccccccc
Confidence 111 0000001 00 01355566665552 00 12223 67778888888888899988887655555666
Q ss_pred hhhHhhh
Q 040445 271 EEVIAVN 277 (358)
Q Consensus 271 ~eviavn 277 (358)
++...+.
T Consensus 173 ~~~Yp~m 179 (414)
T KOG2366|consen 173 PEGYPIM 179 (414)
T ss_pred cccchhH
Confidence 6544333
No 58
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=33.85 E-value=2e+02 Score=29.67 Aligned_cols=43 Identities=9% Similarity=0.054 Sum_probs=29.6
Q ss_pred chhhHHHHHHHH-h-hCccEEEeecCCCCCCchhHHHHHHHHHHHHhC
Q 040445 116 SLDNRIESNIAF-E-QGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAG 161 (358)
Q Consensus 116 s~~~~~~da~~f-~-WGvDylK~D~c~~~~~~~~~~y~~m~~AL~~~g 161 (358)
.+.+....++.+ + -|||=+.+|....- ...-...+.+++++..
T Consensus 210 V~~~l~~~~~~w~~~~giDGfRlDavk~v---~~~f~~~~~~~~~~~~ 254 (479)
T PRK09441 210 VREELKYWAKWYMETTGFDGFRLDAVKHI---DAWFIKEWIEHVREVA 254 (479)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEhhhcCC---CHHHHHHHHHHHHHhc
Confidence 456666677777 5 99999999987652 2344566777776554
No 59
>PF07718 Coatamer_beta_C: Coatomer beta C-terminal region; InterPro: IPR011710 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the C-terminal domain of the beta subunit from coatomer proteins (Beta-coat proteins). The C-terminal domain probably adapts the function of the N-terminal IPR002553 from INTERPRO domain. Coatomer protein complex I (COPI)-coated vesicles are involved in transport between the endoplasmic reticulum and the Golgi but also participate in transport from early to late endosomes within the endocytic pathway []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030126 COPI vesicle coat
Probab=30.76 E-value=1e+02 Score=26.69 Aligned_cols=47 Identities=17% Similarity=0.191 Sum_probs=32.5
Q ss_pred EEEEEEeCCCCc-eEEEEEccccc-cccccccccCcccceeecceEEEEEcCCcEEEEEEee
Q 040445 295 IVVLLESRKTFS-SMMTAHWDDIG-IKSNNTLFEHRTLETKFQGKLTAKVDGHSCKMYELTP 354 (358)
Q Consensus 295 ~av~l~N~~~~~-~~~tv~l~~lG-l~~~~DlW~g~~~~g~~~g~~~~~l~ph~~~llrl~~ 354 (358)
.=|.++|..+.. +.++|.|+-+| |+ ..+..-.++|.||+.+-+|.+-
T Consensus 73 LDvllvNqT~~tLqNl~vElat~gdLk-------------lve~p~~~tL~P~~~~~i~~~i 121 (140)
T PF07718_consen 73 LDVLLVNQTNETLQNLTVELATLGDLK-------------LVERPQPITLAPHGFARIKATI 121 (140)
T ss_pred EEEEEEeCChhhhhcEEEEEEecCCcE-------------EccCCCceeeCCCcEEEEEEEE
Confidence 347889987765 78999888775 31 2222225689999999888764
No 60
>PRK05402 glycogen branching enzyme; Provisional
Probab=28.09 E-value=1.9e+02 Score=31.62 Aligned_cols=68 Identities=3% Similarity=-0.093 Sum_probs=38.0
Q ss_pred EEEEEEcCC-CcEEEEEEeCCCCce-EEEEEccccccccccccccCccc--ce--------e---------ecceEEEEE
Q 040445 284 QIWAGPLSG-NRIVVLLESRKTFSS-MMTAHWDDIGIKSNNTLFEHRTL--ET--------K---------FQGKLTAKV 342 (358)
Q Consensus 284 ~vw~~~l~d-g~~av~l~N~~~~~~-~~tv~l~~lGl~~~~DlW~g~~~--~g--------~---------~~g~~~~~l 342 (358)
-++.+...+ ++..|+++|.++.+. .++|.+..-|. -.++++.... +| . ....+.+.|
T Consensus 636 laf~R~~~~~~~~vlvv~N~~~~~~~~y~i~~p~~g~--~~~ilnsd~~~~gg~~~~~~~~~~~~~~~~~g~~~~~~i~l 713 (726)
T PRK05402 636 LSFLRRGKDDGEPLLVVCNFTPVPRHDYRLGVPQAGR--WREVLNTDAEHYGGSNVGNGGGVHAEEVPWHGRPHSLSLTL 713 (726)
T ss_pred EEEEEecCCCCCeEEEEEeCCCCcccceEECCCCCCe--EEEEEcCcchhhCCCCCCCCCceeccccccCCCCCEEEEEe
Confidence 344454433 467899999987654 45555543220 0022222211 00 0 112567899
Q ss_pred cCCcEEEEEEe
Q 040445 343 DGHSCKMYELT 353 (358)
Q Consensus 343 ~ph~~~llrl~ 353 (358)
||-++++||..
T Consensus 714 p~~~~~v~~~~ 724 (726)
T PRK05402 714 PPLATLILKPE 724 (726)
T ss_pred CCCEEEEEEEc
Confidence 99999999874
No 61
>PRK14705 glycogen branching enzyme; Provisional
Probab=25.09 E-value=2.8e+02 Score=32.44 Aligned_cols=71 Identities=7% Similarity=-0.051 Sum_probs=40.2
Q ss_pred eEEEEEEcCCCcEEEEEEeCCCCceE-EEEEcccccc-----ccccccccCcccc--e----------eecceEEEEEcC
Q 040445 283 QQIWAGPLSGNRIVVLLESRKTFSSM-MTAHWDDIGI-----KSNNTLFEHRTLE--T----------KFQGKLTAKVDG 344 (358)
Q Consensus 283 ~~vw~~~l~dg~~av~l~N~~~~~~~-~tv~l~~lGl-----~~~~DlW~g~~~~--g----------~~~g~~~~~l~p 344 (358)
+-.|.+.-.+++..|+|+|.+..+.+ ..|.+..-|. .+....|.|...+ + -...+++++|||
T Consensus 1135 vlaf~R~~~~~~~vlvv~Nftp~~~~~y~igvp~~G~y~eilnsd~~~ygGsg~~n~~~~~~~~~~~~g~~~s~~i~lPp 1214 (1224)
T PRK14705 1135 VLSFIRWDGDGNPLVCAINFSGGPHKGYTLGVPAAGAWTEVLNTDHETYGGSGVLNPGSLKATTEGQDGQPATLTVTLPP 1214 (1224)
T ss_pred EEEEEEeCCCCCEEEEEEcCCCCCccCceECCCCCCeEEEEEeCchhhcCCCCcCCCCceeecccccCCCCceEEEEecC
Confidence 34555665556678999999887765 5543332221 1111223332210 0 012267889999
Q ss_pred CcEEEEEEe
Q 040445 345 HSCKMYELT 353 (358)
Q Consensus 345 h~~~llrl~ 353 (358)
-++++|+..
T Consensus 1215 l~~~~~~~~ 1223 (1224)
T PRK14705 1215 LGASFFAPA 1223 (1224)
T ss_pred CEEEEEEEC
Confidence 999999864
No 62
>cd08205 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase like proteins, Rubisco-Form IV. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions, like for example 2,3-diketo-5-methylthiopentyl-1-phosphate enolase or 5-methyl
Probab=24.76 E-value=1.4e+02 Score=29.86 Aligned_cols=49 Identities=27% Similarity=0.394 Sum_probs=34.5
Q ss_pred hHHHHHHHH-hhCccEEEeecCCCCC--CchhHHHHHHHHHHH----HhCCCcEEe
Q 040445 119 NRIESNIAF-EQGIDYLKYDNCFNDD--TRPTIRYRAMSDALK----KAGRPIFFS 167 (358)
Q Consensus 119 ~~~~da~~f-~WGvDylK~D~c~~~~--~~~~~~y~~m~~AL~----~~gr~i~ls 167 (358)
-....+..+ +=|||+||.|....+. .+..++....++|++ ++|+..+|.
T Consensus 147 ~la~~~~~l~~gGvD~Ikdde~~ge~~~~~~eER~~~v~~av~~a~~~TG~~~~y~ 202 (367)
T cd08205 147 ELAELAYELALGGIDLIKDDELLADQPYAPFEERVRACMEAVRRANEETGRKTLYA 202 (367)
T ss_pred HHHHHHHHHHhcCCCeeeccccccCcccCCHHHHHHHHHHHHHHHHHhhCCcceEE
Confidence 345667777 8899999999876543 356788888777774 456755554
No 63
>cd08210 RLP_RrRLP Ribulose bisphosphate carboxylase like proteins (RLPs) similar to R.rubrum RLP. RLP from Rhodospirillum rubrum plays a role in an uncharacterized sulfur salvage pathway and has been shown to catalyze a novel isomerization reaction that converts 5-methylthio-d-ribulose 1-phosphate to a 3:1 mixture of 1-methylthioxylulose 5-phosphate and 1-methylthioribulose 5-phosphate.
Probab=23.98 E-value=1.8e+02 Score=29.07 Aligned_cols=51 Identities=25% Similarity=0.349 Sum_probs=34.7
Q ss_pred hhhHHHHHHHH-hhCccEEEeecCCCCC--CchhHHHHHHHHHHH----HhCCCcEEe
Q 040445 117 LDNRIESNIAF-EQGIDYLKYDNCFNDD--TRPTIRYRAMSDALK----KAGRPIFFS 167 (358)
Q Consensus 117 ~~~~~~da~~f-~WGvDylK~D~c~~~~--~~~~~~y~~m~~AL~----~~gr~i~ls 167 (358)
.+-+...+..+ .=|||+||-|..-.+. .+..+|.....+|++ ++|+...|.
T Consensus 140 ~~~~a~~~~~~~~gGvD~IKdDe~l~~~~~~p~~eRv~~v~~av~~a~~eTG~~~~y~ 197 (364)
T cd08210 140 AAELAELAYAFALGGIDIIKDDHGLADQPFAPFEERVKACQEAVAEANAETGGRTLYA 197 (364)
T ss_pred HHHHHHHHHHHHhcCCCeeecCccccCccCCCHHHHHHHHHHHHHHHHhhcCCcceEE
Confidence 34456667777 8899999999754432 245778777777775 456766555
No 64
>TIGR03326 rubisco_III ribulose bisphosphate carboxylase, type III. Members of this protein family are the archaeal, single chain, type III form of ribulose bisphosphate carboxylase, or RuBisCO. Members act is a three-step pathway for conversion of the sugar moiety of AMP to two molecules of 3-phosphoglycerate. Many of these species use ADP-dependent sugar kinases, which form AMP, for glycolysis.
Probab=23.84 E-value=2e+02 Score=29.44 Aligned_cols=51 Identities=16% Similarity=0.232 Sum_probs=34.3
Q ss_pred hhHHHHHHHH-hhCccEEEeecCCCCCC--chhHHHHHHHHHH----HHhCCCcEEee
Q 040445 118 DNRIESNIAF-EQGIDYLKYDNCFNDDT--RPTIRYRAMSDAL----KKAGRPIFFSM 168 (358)
Q Consensus 118 ~~~~~da~~f-~WGvDylK~D~c~~~~~--~~~~~y~~m~~AL----~~~gr~i~ls~ 168 (358)
+-....+..+ .=||||||=|-.-.+.. ...+|.....+|+ +++|+..+|..
T Consensus 160 ~~~a~~~~~~~~GGvD~IKDDE~l~~q~~~p~~eRv~~~~~a~~~a~~eTG~~~~ya~ 217 (412)
T TIGR03326 160 EEHAKVAYELWSGGVDLLKDDENLTSQPFNRFEERVEKLYKVRDKVEAETGERKEYLA 217 (412)
T ss_pred HHHHHHHHHHHhcCCceeecCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCCcceEEE
Confidence 3455566667 77999999997654322 3456666655555 56899887774
No 65
>cd08148 RuBisCO_large Ribulose bisphosphate carboxylase large chain. Ribulose bisphosphate carboxylase (Rubisco) plays an important role in the Calvin reductive pentose phosphate pathway. It catalyzes the primary CO2 fixation step. Rubisco is activated by carbamylation of an active site lysine, stabilized by a divalent cation, which then catalyzes the proton abstraction from the substrate ribulose 1,5 bisphosphate (RuBP) and leads to the formation of two molecules of 3-phosphoglycerate. Members of the Rubisco family can be divided into 4 subgroups, Form I-IV, which differ in their taxonomic distribution and subunit composition. Form I-III have Rubisco activity, while Form IV, also called Rubisco-like proteins (RLP), are missing critical active site residues and therefore do not catalyze CO2 fixation. They are believed to utilize a related enzymatic mechanism, but have divergent functions.
Probab=23.08 E-value=1.7e+02 Score=29.32 Aligned_cols=52 Identities=21% Similarity=0.318 Sum_probs=34.7
Q ss_pred hhHHHHHHHH-hhCccEEEeecCCCCCC--chhHHHHHHHHHH----HHhCCCcEEeec
Q 040445 118 DNRIESNIAF-EQGIDYLKYDNCFNDDT--RPTIRYRAMSDAL----KKAGRPIFFSMC 169 (358)
Q Consensus 118 ~~~~~da~~f-~WGvDylK~D~c~~~~~--~~~~~y~~m~~AL----~~~gr~i~ls~c 169 (358)
+.....+..+ .=|+||||=|-.-.+.. ...+|.....+|+ +++|+..+|...
T Consensus 143 ~~~a~~~y~~~~GG~D~IKDDE~l~~q~~~p~~eRv~~~~~a~~~a~~eTG~~~~y~~N 201 (366)
T cd08148 143 KYTAEAAYAAALGGLDLIKDDETLTDQPFCPLRDRITEVAAALDRVQEETGEKKLYAVN 201 (366)
T ss_pred HHHHHHHHHHHhCCCCccccccccCCCCCCcHHHHHHHHHHHHHHHHHhhCCcceEEEE
Confidence 4455566667 77999999997554322 3466766655555 568998887754
No 66
>PF08141 SspH: Small acid-soluble spore protein H family; InterPro: IPR012610 This family consists of the small acid-soluble spore proteins (SASP) of the H type (sspH). SspH are unique to spores of Bacillus subtilis and are expressed only in the forespore compartment during sporulation of this organism. The sspH genes are monocistronic and are recognised by the forespore-specific sigma factor for RNA polymerase - sigma-G. The specific role of this protein is unclear but is thought to play a role in sporulation under conditions different from that of the common laboratory tests of spore properties [].; GO: 0030436 asexual sporulation, 0042601 endospore-forming forespore
Probab=22.58 E-value=1.1e+02 Score=22.30 Aligned_cols=51 Identities=10% Similarity=0.145 Sum_probs=33.1
Q ss_pred ccccccchhhHhhhccCCCeEEEEEEcCCCcEEEEEEeCCCCceEEEEEcccc
Q 040445 264 TMPIIGNEEVIAVNQAINDQQIWAGPLSGNRIVVLLESRKTFSSMMTAHWDDI 316 (358)
Q Consensus 264 ~l~iL~N~eviavnQd~~~~~vw~~~l~dg~~av~l~N~~~~~~~~tv~l~~l 316 (358)
.++|+.-++++.|-=. +.+||+..+...+-..-++-.++...+.+|++.+|
T Consensus 6 AkeI~~S~~~i~V~y~--G~pV~Ie~vde~~~tA~V~~l~~p~~~~~Vpv~~L 56 (58)
T PF08141_consen 6 AKEIAESPDMIEVTYN--GVPVWIEHVDEENGTARVHPLDNPEEEQEVPVNDL 56 (58)
T ss_pred HHHHHcCCceEEEEEC--CEEEEEEEEcCCCCeEEEEECCCCCcEEEEEHHHc
Confidence 4556666665544432 57999988855544556666666667777877765
No 67
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism. 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde The family also includes a group of related bacterial proteins of unknown function, see examples Q57843 from SWISSPROT and P76143 from SWISSPROT.; GO: 0016829 lyase activity; PDB: 2A4A_A 1VCV_B 1P1X_A 1KTN_B 1JCL_A 1JCJ_A 1MZH_A 3GKF_D 3GLC_L 3GND_N ....
Probab=20.87 E-value=2.9e+02 Score=25.30 Aligned_cols=46 Identities=20% Similarity=0.124 Sum_probs=33.1
Q ss_pred HHHHHHH-hhCccEEEeecCCCCCCchhHHHHHHHHHHHHhCCC----cEEe
Q 040445 121 IESNIAF-EQGIDYLKYDNCFNDDTRPTIRYRAMSDALKKAGRP----IFFS 167 (358)
Q Consensus 121 ~~da~~f-~WGvDylK~D~c~~~~~~~~~~y~~m~~AL~~~gr~----i~ls 167 (358)
..-++.. +-|.||||.-.-.. .....+....|++++.+...| +..+
T Consensus 149 ~~a~ria~e~GaD~vKt~tg~~-~~~t~~~~~~~~~~~~~~~~p~~~~Vk~s 199 (236)
T PF01791_consen 149 ARAARIAAELGADFVKTSTGKP-VGATPEDVELMRKAVEAAPVPGKVGVKAS 199 (236)
T ss_dssp HHHHHHHHHTT-SEEEEE-SSS-SCSHHHHHHHHHHHHHTHSSTTTSEEEEE
T ss_pred HHHHHHHHHhCCCEEEecCCcc-ccccHHHHHHHHHHHHhcCCCcceEEEEe
Confidence 4455566 99999999998754 444567788899998888777 7665
No 68
>PF07100 ASRT: Anabaena sensory rhodopsin transducer; InterPro: IPR009794 This family consists of several hypothetical bacterial proteins of around 125 resides in length, including the hypothetical protein TM1070 from Thermotoga maritima, which has a beta-sandwich structure with a jelly-roll fold. The function of these proteins is unknown. ; PDB: 1NC7_A 2II9_D 2IIA_A 2II8_B 2II7_G.
Probab=20.85 E-value=2.2e+02 Score=24.00 Aligned_cols=18 Identities=0% Similarity=0.006 Sum_probs=12.8
Q ss_pred EEEEEeCCCCceEEEEEc
Q 040445 296 VVLLESRKTFSSMMTAHW 313 (358)
Q Consensus 296 av~l~N~~~~~~~~tv~l 313 (358)
.+++.|.++..+.++|++
T Consensus 30 ~~CiLN~~d~dA~i~it~ 47 (121)
T PF07100_consen 30 SLCILNTGDEDAHIEITF 47 (121)
T ss_dssp EEEEEE-SSS-EEEEEEE
T ss_pred eEEEEecCCCceEEEEEE
Confidence 699999999988766554
Done!