Your job contains 1 sequence.
>040446
MVGWQRHLQPVLCQVGKILGHNYTASANFYSSRLQSSLLHGQLLHIQNLWTSPSTNISRP
LYQYLQQLGISSTRKLLANSSDETPVSSPLLAIESGKADDQKVVSKPAKVQAVLKGIKQS
PKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDRLLVAE
AFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRELTAEEEAQIARLRVHKFRKLTKRE
QRLVPHQLIETTPIWNRRGKSSNREPSMNA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040446
(270 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2121318 - symbol:AT4G28360 species:3702 "Arabi... 826 2.2e-82 1
TAIR|locus:2018214 - symbol:AT1G52370 species:3702 "Arabi... 818 1.5e-81 1
TIGR_CMR|SPO_0486 - symbol:SPO_0486 "ribosomal protein L2... 230 3.1e-19 1
TIGR_CMR|NSE_0271 - symbol:NSE_0271 "ribosomal protein L2... 181 4.9e-14 1
ZFIN|ZDB-GENE-080303-28 - symbol:mrpl22 "mitochondrial ri... 179 7.9e-14 1
UNIPROTKB|Q0VFH6 - symbol:mrpl22 "39S ribosomal protein L... 177 1.3e-13 1
UNIPROTKB|Q5RAH3 - symbol:MRPL22 "39S ribosomal protein L... 175 2.1e-13 1
UNIPROTKB|Q9KNY9 - symbol:rplV "50S ribosomal protein L22... 173 3.4e-13 1
TIGR_CMR|VC_2591 - symbol:VC_2591 "ribosomal protein L22"... 173 3.4e-13 1
UNIPROTKB|F1P2F4 - symbol:MRPL22 "Uncharacterized protein... 171 5.6e-13 1
TIGR_CMR|CHY_2304 - symbol:CHY_2304 "ribosomal protein L2... 171 5.6e-13 1
UNIPROTKB|P61175 - symbol:rplV "50S ribosomal subunit pro... 170 7.1e-13 1
TIGR_CMR|APH_0285 - symbol:APH_0285 "ribosomal protein L2... 170 7.1e-13 1
UNIPROTKB|E2R7W5 - symbol:MRPL22 "Uncharacterized protein... 169 9.1e-13 1
UNIPROTKB|Q3SZX5 - symbol:MRPL22 "39S ribosomal protein L... 168 1.2e-12 1
TIGR_CMR|ECH_0414 - symbol:ECH_0414 "ribosomal protein L2... 168 1.2e-12 1
UNIPROTKB|E7ESL0 - symbol:MRPL22 "39S ribosomal protein L... 167 1.5e-12 1
UNIPROTKB|Q9NWU5 - symbol:MRPL22 "39S ribosomal protein L... 167 1.5e-12 1
UNIPROTKB|O62952 - symbol:rpl22 "50S ribosomal protein L2... 165 2.4e-12 1
TIGR_CMR|CPS_0868 - symbol:CPS_0868 "ribosomal protein L2... 162 5.3e-12 1
UNIPROTKB|J3KQY1 - symbol:MRPL22 "39S ribosomal protein L... 167 6.2e-12 1
TIGR_CMR|BA_0115 - symbol:BA_0115 "ribosomal protein L22"... 161 6.9e-12 1
RGD|1309277 - symbol:Mrpl22 "mitochondrial ribosomal prot... 161 6.9e-12 1
UNIPROTKB|P61181 - symbol:rplV "50S ribosomal protein L22... 160 9.3e-12 1
TIGR_CMR|CBU_0243 - symbol:CBU_0243 "ribosomal protein L2... 160 9.3e-12 1
MGI|MGI:1333794 - symbol:Mrpl22 "mitochondrial ribosomal ... 159 1.2e-11 1
TIGR_CMR|SO_0236 - symbol:SO_0236 "ribosomal protein L22"... 154 4.9e-11 1
FB|FBgn0030786 - symbol:mRpL22 "mitochondrial ribosomal p... 161 9.7e-11 1
UNIPROTKB|Q29IK4 - symbol:mRpL22 "39S ribosomal protein L... 161 9.7e-11 1
TIGR_CMR|DET_0479 - symbol:DET_0479 "ribosomal protein L2... 140 2.1e-09 1
TIGR_CMR|GSU_2852 - symbol:GSU_2852 "ribosomal protein L2... 136 6.0e-09 1
DICTYBASE|DDB_G0279519 - symbol:mrpl22 "ribosomal protein... 138 1.7e-07 1
POMBASE|SPCC1739.02c - symbol:mrpl22 "mitochondrial ribos... 137 2.9e-07 1
TIGR_CMR|CJE_1870 - symbol:CJE_1870 "ribosomal protein L2... 117 8.5e-07 1
UNIPROTKB|P0C444 - symbol:rpl22 "50S ribosomal protein L2... 109 6.7e-06 1
UNIPROTKB|P0C445 - symbol:rpl22 "50S ribosomal protein L2... 109 6.7e-06 1
UNIPROTKB|P0C446 - symbol:rpl22 "50S ribosomal protein L2... 109 6.7e-06 1
UNIPROTKB|Q6END4 - symbol:rpl22 "50S ribosomal protein L2... 109 6.7e-06 1
SGD|S000005121 - symbol:MRPL22 "Mitochondrial ribosomal p... 120 5.7e-05 1
UNIPROTKB|F1RQC9 - symbol:LOC100739413 "Uncharacterized p... 95 0.00024 1
>TAIR|locus:2121318 [details] [associations]
symbol:AT4G28360 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237
GO:GO:0005739 EMBL:CP002687 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HSSP:P48286 HOGENOM:HOG000238072
ProtClustDB:CLSN2689658 EMBL:AY085803 EMBL:BT025797 EMBL:AK227856
IPI:IPI00540979 RefSeq:NP_567805.1 UniGene:At.32022
ProteinModelPortal:Q8LDU0 SMR:Q8LDU0 STRING:Q8LDU0 PRIDE:Q8LDU0
EnsemblPlants:AT4G28360.1 GeneID:828951 KEGG:ath:AT4G28360
TAIR:At4g28360 InParanoid:Q8LDU0 PhylomeDB:Q8LDU0
Genevestigator:Q8LDU0 Uniprot:Q8LDU0
Length = 271
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 168/268 (62%), Positives = 212/268 (79%)
Query: 1 MVGWQRHLQPVLCQVGKILGHNYTASANFYXXXXXXXXXXXXXXXIQNLWTSPSTNISRP 60
MVGW+R+LQ V+ QVG+ + +++ ++AN Y +Q+L PS + SRP
Sbjct: 1 MVGWKRNLQTVIRQVGRRVKNSHISTAN-YSSSTRNLESPFSQGYLQSL-LRPSYS-SRP 57
Query: 61 LYQYLQQLGISSTRKLLANSSD-ETPVSSPLLAIESGKADDQKVVSKPAKVQAVLKGIKQ 119
LY +LQQLGIS++R+L A+ +P+SSP L + SGK ++QK++ K KVQAVLK IKQ
Sbjct: 58 LYHHLQQLGISTSRQLQASEEPVSSPLSSPAL-LGSGKEEEQKIIPKRQKVQAVLKSIKQ 116
Query: 120 SPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDRLLVA 179
SPKK+NLVAALVRGMRVEDAL+QLQVT+KRAA+TVY+VIH+ARANATHNHGLDPDRLLVA
Sbjct: 117 SPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDPDRLLVA 176
Query: 180 EAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRELTAEEEAQIARLRVHKFRKLTKR 239
EAFVGKG F K+V+YH+KGRSGI P CRLTV+VRE T EEEA+IARL+VH F+K +KR
Sbjct: 177 EAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNFKKKSKR 236
Query: 240 EQRLVPHQLIETTPIWNRRGKSSNREPS 267
E++LVPH+LIET+PIWNRRG +N S
Sbjct: 237 ERQLVPHKLIETSPIWNRRGTKANHRSS 264
>TAIR|locus:2018214 [details] [associations]
symbol:AT1G52370 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=IEA] InterPro:IPR001063
InterPro:IPR005727 Pfam:PF00237 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 eggNOG:COG0091 EMBL:BT026039
EMBL:AK222231 EMBL:AK227361 EMBL:AK317366 IPI:IPI00543103
RefSeq:NP_001031174.1 RefSeq:NP_001117473.1 RefSeq:NP_564605.2
UniGene:At.43062 ProteinModelPortal:Q56W16 SMR:Q56W16 STRING:Q56W16
PaxDb:Q56W16 PRIDE:Q56W16 EnsemblPlants:AT1G52370.1
EnsemblPlants:AT1G52370.2 EnsemblPlants:AT1G52370.3 GeneID:841667
KEGG:ath:AT1G52370 TAIR:At1g52370 HOGENOM:HOG000238072
InParanoid:Q56W16 OMA:FVGKGFF PhylomeDB:Q56W16
ProtClustDB:CLSN2689658 Genevestigator:Q56W16 Uniprot:Q56W16
Length = 269
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 167/268 (62%), Positives = 208/268 (77%)
Query: 1 MVGWQRHLQPVLCQVGKILGHNYTASANFYXXXXXXXXXXXXXXXIQNLWTSPSTNISRP 60
M GWQ++LQ V+ QVGK + ++ ++AN+ +Q+L S T SRP
Sbjct: 1 MAGWQKNLQIVIRQVGKRVKDSHISTANY--SSTRNLESPFSQGYLQSLLRS--TYSSRP 56
Query: 61 LYQYLQQLGISSTRKLLANSSD-ETPVSSPLLAIESGKADDQKVVSKPAKVQAVLKGIKQ 119
LY +LQQLGIS++R+L A +P+SSP L + SGK ++QK++ K KVQAVLK IKQ
Sbjct: 57 LYYHLQQLGISTSRQLQAGEEPVSSPLSSPAL-LGSGKEEEQKIIPKRQKVQAVLKSIKQ 115
Query: 120 SPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDRLLVA 179
SPKK+NLVAALVRGMRVEDAL+QLQVT+KRA++TVY+VIH+ARANATHNHGLDPDRLLVA
Sbjct: 116 SPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDRLLVA 175
Query: 180 EAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRELTAEEEAQIARLRVHKFRKLTKR 239
EAFVGKG F K+V+YH+KGRSGI P CRLTV+VRE TAEEEA+IARL+VH F+KL KR
Sbjct: 176 EAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKKLNKR 235
Query: 240 EQRLVPHQLIETTPIWNRRGKSSNREPS 267
+++LVPH+LIET+PIWNRRG N S
Sbjct: 236 QRQLVPHKLIETSPIWNRRGTKGNHRSS 263
>TIGR_CMR|SPO_0486 [details] [associations]
symbol:SPO_0486 "ribosomal protein L22" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 ProtClustDB:PRK00565
OMA:ASRINKR RefSeq:YP_165748.1 ProteinModelPortal:Q5LW57
GeneID:3195009 KEGG:sil:SPO0486 PATRIC:23374233 Uniprot:Q5LW57
Length = 126
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 54/128 (42%), Positives = 82/128 (64%)
Query: 96 GKADDQKVVSKPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVY 155
GK + + V++ + A L+ ++ SP+K+NLVAA++RG +V AL L + KR A+ V
Sbjct: 2 GKEKNPRRVAEN-EAMAKLRMLRTSPQKLNLVAAMIRGKKVGQALTDLTFSNKRIAQDVK 60
Query: 156 QVIHSARANATHNHGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVR 215
+ + SA ANA +NH LD D L+VAEA+VGK KR ++GR G ++P LT+ VR
Sbjct: 61 KCLQSAIANAENNHNLDVDELIVAEAWVGKNLVMKRGRPRARGRFGKIMKPFSELTITVR 120
Query: 216 ELTAEEEA 223
++ EE+A
Sbjct: 121 QV--EEQA 126
>TIGR_CMR|NSE_0271 [details] [associations]
symbol:NSE_0271 "ribosomal protein L22" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
OMA:FVKEIRV ProtClustDB:PRK00565 RefSeq:YP_506162.1
ProteinModelPortal:Q2GED4 STRING:Q2GED4 GeneID:3931467
KEGG:nse:NSE_0271 PATRIC:22680633 eggNOG:NOG120735
BioCyc:NSEN222891:GHFU-298-MONOMER Uniprot:Q2GED4
Length = 113
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 41/91 (45%), Positives = 58/91 (63%)
Query: 110 VQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNH 169
++A K +K S +K+NLVA ++RG V+ A QL K AK + +V+ S+ ANA +N
Sbjct: 1 MRAEYKNMKSSVQKVNLVADMIRGKGVDVARSQLLFLKKALAKPLSKVLMSSVANAQNNF 60
Query: 170 GLDPDRLLVAEAFVGKGFFKKRVSYHSKGRS 200
G+DPD L V E FVGKG KR + ++GRS
Sbjct: 61 GVDPDNLYVKEVFVGKGMSLKRFAARARGRS 91
>ZFIN|ZDB-GENE-080303-28 [details] [associations]
symbol:mrpl22 "mitochondrial ribosomal protein L22"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237
ZFIN:ZDB-GENE-080303-28 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843
GeneTree:ENSGT00390000002110 OMA:NRIVYPP EMBL:CR391906
IPI:IPI00961220 Ensembl:ENSDART00000086060 ArrayExpress:F1Q829
Bgee:F1Q829 Uniprot:F1Q829
Length = 209
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 39/112 (34%), Positives = 65/112 (58%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L+RGM ++ AL+QL+ K+ AK + +V+ A+ A
Sbjct: 67 RPAEICHSRRQIKYSKDKMWYLAKLIRGMTIDQALVQLEFNDKKGAKIIREVLLEAQDMA 126
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
NH ++ L +AE++ GKG + KR+ YH +G GI + C V + E
Sbjct: 127 VRNHNVEYKSNLYIAESYSGKGKYLKRIRYHGRGMFGIMEKVYCHYFVKLVE 178
>UNIPROTKB|Q0VFH6 [details] [associations]
symbol:mrpl22 "39S ribosomal protein L22, mitochondrial"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
Pfam:PF00237 PROSITE:PS00464 GO:GO:0005739 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.470.10 PANTHER:PTHR13501
SUPFAM:SSF54843 eggNOG:COG0091 CTD:29093
GeneTree:ENSGT00390000002110 HOGENOM:HOG000048027
HOVERGEN:HBG093486 OMA:NRIVYPP EMBL:BC118825 RefSeq:NP_001072914.1
UniGene:Str.12815 ProteinModelPortal:Q0VFH6 STRING:Q0VFH6
Ensembl:ENSXETT00000042033 GeneID:780376 KEGG:xtr:780376
Xenbase:XB-GENE-962521 Uniprot:Q0VFH6
Length = 204
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 42/112 (37%), Positives = 63/112 (56%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA+V K IK S K+ +A L+RGM V+ A+ QL+ K+ AK + +V+ A+ A
Sbjct: 61 RPAEVYHCRKQIKYSKDKMWYLAKLIRGMSVDQAIAQLEFNDKKGAKIMKEVLLEAQDLA 120
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
NH ++ L VAE+F KG + KR+ YH +G GI + C V + E
Sbjct: 121 VRNHNVEFKSNLYVAESFSNKGKYLKRIRYHGRGMFGIMDKVYCHYFVKLVE 172
>UNIPROTKB|Q5RAH3 [details] [associations]
symbol:MRPL22 "39S ribosomal protein L22, mitochondrial"
species:9601 "Pongo abelii" [GO:0005739 "mitochondrion"
evidence=ISS] InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237
PROSITE:PS00464 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843
HSSP:P48286 CTD:29093 HOVERGEN:HBG093486 EMBL:CR859042
EMBL:CR860157 RefSeq:NP_001126345.1 UniGene:Pab.18816
ProteinModelPortal:Q5RAH3 GeneID:100173326 KEGG:pon:100173326
Uniprot:Q5RAH3
Length = 206
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 39/112 (34%), Positives = 64/112 (57%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L+RGM ++ AL QL+ K+ AK + +V+ A+ A
Sbjct: 63 RPAEIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMA 122
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+H ++ L +AE+ G+G + KR+ YH +GR GI R C V + E
Sbjct: 123 VRDHNVEFRSNLYIAESTSGRGQYLKRIRYHGRGRFGIMERVYCHYFVKLVE 174
>UNIPROTKB|Q9KNY9 [details] [associations]
symbol:rplV "50S ribosomal protein L22" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 KO:K02890 eggNOG:COG0091
ProtClustDB:PRK00565 OMA:ASRINKR PIR:A82059 RefSeq:NP_232219.1
ProteinModelPortal:Q9KNY9 SMR:Q9KNY9 DNASU:2615608 GeneID:2615608
KEGG:vch:VC2591 PATRIC:20084208 Uniprot:Q9KNY9
Length = 110
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 42/97 (43%), Positives = 59/97 (60%)
Query: 120 SPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDRLLVA 179
SP+K LVA +RG V+ AL L + K+AA+ V +V+ SA ANA HN G D D L VA
Sbjct: 13 SPQKARLVADQIRGKSVDQALELLTFSNKKAAELVKKVLESAIANAEHNEGADIDDLRVA 72
Query: 180 EAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+ FV +G KR+ +KGR+ ++ +TVVV +
Sbjct: 73 KIFVDEGPVMKRIMPRAKGRADRILKRSSHITVVVAD 109
>TIGR_CMR|VC_2591 [details] [associations]
symbol:VC_2591 "ribosomal protein L22" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 KO:K02890 eggNOG:COG0091
ProtClustDB:PRK00565 OMA:ASRINKR PIR:A82059 RefSeq:NP_232219.1
ProteinModelPortal:Q9KNY9 SMR:Q9KNY9 DNASU:2615608 GeneID:2615608
KEGG:vch:VC2591 PATRIC:20084208 Uniprot:Q9KNY9
Length = 110
Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 42/97 (43%), Positives = 59/97 (60%)
Query: 120 SPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDRLLVA 179
SP+K LVA +RG V+ AL L + K+AA+ V +V+ SA ANA HN G D D L VA
Sbjct: 13 SPQKARLVADQIRGKSVDQALELLTFSNKKAAELVKKVLESAIANAEHNEGADIDDLRVA 72
Query: 180 EAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+ FV +G KR+ +KGR+ ++ +TVVV +
Sbjct: 73 KIFVDEGPVMKRIMPRAKGRADRILKRSSHITVVVAD 109
>UNIPROTKB|F1P2F4 [details] [associations]
symbol:MRPL22 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR001063
InterPro:IPR005727 Pfam:PF00237 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843
GeneTree:ENSGT00390000002110 OMA:NRIVYPP EMBL:AADN02028674
IPI:IPI00583987 Ensembl:ENSGALT00000006244 Uniprot:F1P2F4
Length = 186
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 38/112 (33%), Positives = 62/112 (55%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L++GM ++ AL QL+ K+ AK + +V+ A+ A
Sbjct: 43 RPAEIYHCRREIKYSKDKMWYLAKLIKGMSIDQALAQLEFNDKKGAKIIKEVLLEAQEMA 102
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
NH ++ L +AE+ GKG + KR+ H KG GI +C V + E
Sbjct: 103 VRNHNVEFKSNLHIAESLAGKGHYTKRIRLHGKGMFGIMKIVKCHYFVKLVE 154
>TIGR_CMR|CHY_2304 [details] [associations]
symbol:CHY_2304 "ribosomal protein L22" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 OMA:ASRINKR RefSeq:YP_361113.1
ProteinModelPortal:Q3A9S1 SMR:Q3A9S1 STRING:Q3A9S1 GeneID:3727499
KEGG:chy:CHY_2304 PATRIC:21277679
BioCyc:CHYD246194:GJCN-2303-MONOMER Uniprot:Q3A9S1
Length = 113
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 43/109 (39%), Positives = 68/109 (62%)
Query: 109 KVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHN 168
+ +AV K I+ SP+K V L+RG VE+AL L+ T K+A+ + +V+ SA ANA +N
Sbjct: 2 EARAVAKYIRISPRKARQVIDLIRGKDVEEALAILRYTPKKASYFIEKVLRSAIANAENN 61
Query: 169 HGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGI-KVRPECRLTVVVRE 216
H + + L VA+A+V +G KR + ++GR + +VR +T+VV E
Sbjct: 62 HDMSKENLYVAKAYVDQGPTLKRYNPRAQGRVDLWRVRTS-HITIVVAE 109
>UNIPROTKB|P61175 [details] [associations]
symbol:rplV "50S ribosomal subunit protein L22"
species:83333 "Escherichia coli K-12" [GO:0015934 "large ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0046677 "response to antibiotic" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001063
InterPro:IPR005727 InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0046677 EMBL:U18997
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 PDB:2VHM PDBsum:2VHM
PDB:2RDO PDBsum:2RDO Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 PDB:3J0T PDB:3J0W
PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T
PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14
PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8
PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V
PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG
PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN
PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D
PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22
PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT
PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB
PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85 PDBsum:1P86
PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB
PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V PDBsum:2J28
PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE
PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX
PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L
PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D
PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T
PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU PDBsum:3J01
PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC
PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0
PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU
PDB:3BBX PDBsum:3BBX EMBL:X02613 ProtClustDB:PRK00565 OMA:ASRINKR
PIR:G23129 RefSeq:NP_417774.1 RefSeq:YP_492117.1
ProteinModelPortal:P61175 SMR:P61175 DIP:DIP-35983N IntAct:P61175
MINT:MINT-1253134 PaxDb:P61175 PRIDE:P61175
EnsemblBacteria:EBESCT00000000391 EnsemblBacteria:EBESCT00000016840
GeneID:12932293 GeneID:947813 KEGG:ecj:Y75_p3861 KEGG:eco:b3315
PATRIC:32122062 EchoBASE:EB0875 EcoGene:EG10882
BioCyc:EcoCyc:EG10882-MONOMER BioCyc:ECOL316407:JW3277-MONOMER
EvolutionaryTrace:P61175 Genevestigator:P61175 Uniprot:P61175
Length = 110
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 42/99 (42%), Positives = 59/99 (59%)
Query: 118 KQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDRLL 177
+ S +K+ LVA L+RG +V AL L T K+AA V +V+ SA ANA HN G D D L
Sbjct: 11 RSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLK 70
Query: 178 VAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
V + FV +G KR+ +KGR+ ++ +TVVV +
Sbjct: 71 VTKIFVDEGPSMKRIMPRAKGRADRILKRTSHITVVVSD 109
>TIGR_CMR|APH_0285 [details] [associations]
symbol:APH_0285 "ribosomal protein L22" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
GO:GO:0006412 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 RefSeq:YP_504897.1
ProteinModelPortal:Q2GL54 STRING:Q2GL54 GeneID:3930326
KEGG:aph:APH_0285 PATRIC:20949144 OMA:FVKEIRV ProtClustDB:PRK00565
BioCyc:APHA212042:GHPM-315-MONOMER Uniprot:Q2GL54
Length = 112
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 37/85 (43%), Positives = 54/85 (63%)
Query: 116 GIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDR 175
G++ +P K+NLVA L+RG V A + L+ K+AA + +V+ SA ANA N+G+D D
Sbjct: 11 GLRSTPAKLNLVADLIRGKDVAVAAMYLKFCKKKAALLIDKVLKSAIANARANYGVDADN 70
Query: 176 LLVAEAFVGKGFFKKRVSYHSKGRS 200
L V E VGK F +RV ++GR+
Sbjct: 71 LYVKEVLVGKAFTLRRVQPRARGRA 95
>UNIPROTKB|E2R7W5 [details] [associations]
symbol:MRPL22 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.470.10 PANTHER:PTHR13501
SUPFAM:SSF54843 GeneTree:ENSGT00390000002110 OMA:NRIVYPP
EMBL:AAEX03003072 Ensembl:ENSCAFT00000035767 Uniprot:E2R7W5
Length = 180
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 42/145 (28%), Positives = 76/145 (52%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L+RGM ++ AL QL+ + K+ A+ + +++ A+ A
Sbjct: 37 RPAEIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFSDKKGAQIIKEILLEAQDMA 96
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTV-VVRELTAEEEA 223
+H ++ L +AE+ G+G + KR+ YH +GR GI + C V +V EA
Sbjct: 97 VRDHNVEFRSNLYIAESTSGRGQYLKRIRYHGRGRFGIMEKVYCHYFVKLVEGPPPPPEA 156
Query: 224 QIARLRVHKFRKLTKREQRLVPHQL 248
+ + H + + R + H L
Sbjct: 157 RKTAV-THAKEYIQELRNRTIIHTL 180
>UNIPROTKB|Q3SZX5 [details] [associations]
symbol:MRPL22 "39S ribosomal protein L22, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001063 InterPro:IPR005727
Pfam:PF00237 PROSITE:PS00464 GO:GO:0005739 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 Gene3D:3.90.470.10 PANTHER:PTHR13501
SUPFAM:SSF54843 eggNOG:COG0091 PDB:2FTC PDBsum:2FTC EMBL:BC102665
IPI:IPI00698858 RefSeq:NP_001030531.1 RefSeq:XP_003585162.1
UniGene:Bt.9758 ProteinModelPortal:Q3SZX5 STRING:Q3SZX5
Ensembl:ENSBTAT00000042844 GeneID:100851134 GeneID:614639
KEGG:bta:100851134 KEGG:bta:614639 CTD:29093
GeneTree:ENSGT00390000002110 HOGENOM:HOG000048027
HOVERGEN:HBG093486 InParanoid:Q3SZX5 OMA:NRIVYPP OrthoDB:EOG45490K
EvolutionaryTrace:Q3SZX5 NextBio:20899205 Uniprot:Q3SZX5
Length = 204
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 37/112 (33%), Positives = 65/112 (58%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L+RGM ++ AL QL+ + K+ A+ + +V+ A+ A
Sbjct: 61 RPAEIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFSDKKGAQIIKEVLLEAQDMA 120
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+H ++ L +AE+ G+G + KR+ YH +GR GI + C V + E
Sbjct: 121 VRDHNVEFRSNLYIAESTSGRGQYLKRIRYHGRGRFGIMEKVFCHYFVKLVE 172
>TIGR_CMR|ECH_0414 [details] [associations]
symbol:ECH_0414 "ribosomal protein L22" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 RefSeq:YP_507232.1
STRING:Q2GH51 GeneID:3927011 KEGG:ech:ECH_0414 PATRIC:20576305
BioCyc:ECHA205920:GJNR-415-MONOMER Uniprot:Q2GH51
Length = 114
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 38/95 (40%), Positives = 59/95 (62%)
Query: 108 AKVQAVLKG--IKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+KV V KG +K +P K+NLVA L+RG V A++ L+ K++A + +V+ SA ANA
Sbjct: 2 SKVLIVAKGMGLKSTPSKLNLVADLIRGKDVSVAMMYLKFCRKKSAGYISKVLKSAVANA 61
Query: 166 THNHGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRS 200
N+ +D D L V E VGK F +R+ ++G++
Sbjct: 62 QANYNIDLDNLYVKEVLVGKSFSLRRIHARARGKA 96
>UNIPROTKB|E7ESL0 [details] [associations]
symbol:MRPL22 "39S ribosomal protein L22, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 EMBL:AC008421 Gene3D:3.90.470.10
PANTHER:PTHR13501 SUPFAM:SSF54843 EMBL:AC008410 HGNC:HGNC:14480
ChiTaRS:MRPL22 IPI:IPI00977335 ProteinModelPortal:E7ESL0 SMR:E7ESL0
Ensembl:ENST00000522038 ArrayExpress:E7ESL0 Bgee:E7ESL0
Uniprot:E7ESL0
Length = 212
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/112 (33%), Positives = 63/112 (56%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L+RGM ++ AL QL+ K+ AK + +V+ A+ A
Sbjct: 69 RPAEIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMA 128
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+H ++ L +AE+ G+G KR+ YH +GR GI + C V + E
Sbjct: 129 VRDHNVEFRSNLYIAESTSGRGQCLKRIRYHGRGRFGIMEKVYCHYFVKLVE 180
>UNIPROTKB|Q9NWU5 [details] [associations]
symbol:MRPL22 "39S ribosomal protein L22, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
Pfam:PF00237 PROSITE:PS00464 GO:GO:0005739 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 EMBL:AC008421 Gene3D:3.90.470.10
PANTHER:PTHR13501 SUPFAM:SSF54843 eggNOG:COG0091 HSSP:P48286
CTD:29093 HOGENOM:HOG000048027 HOVERGEN:HBG093486 OrthoDB:EOG45490K
EMBL:AF161507 EMBL:AK000601 EMBL:AK302784 EMBL:CR933679
EMBL:AC008410 EMBL:BC012565 EMBL:AB051622 IPI:IPI00556611
IPI:IPI00977524 RefSeq:NP_001014990.1 RefSeq:NP_054899.2
UniGene:Hs.483924 ProteinModelPortal:Q9NWU5 SMR:Q9NWU5
IntAct:Q9NWU5 STRING:Q9NWU5 PhosphoSite:Q9NWU5 DMDM:74753031
PaxDb:Q9NWU5 PRIDE:Q9NWU5 DNASU:29093 Ensembl:ENST00000523037
GeneID:29093 KEGG:hsa:29093 UCSC:uc003lvy.4 GeneCards:GC05P154300
HGNC:HGNC:14480 MIM:611835 neXtProt:NX_Q9NWU5 PharmGKB:PA30952
InParanoid:Q9NWU5 ChiTaRS:MRPL22 GenomeRNAi:29093 NextBio:52107
ArrayExpress:Q9NWU5 Bgee:Q9NWU5 CleanEx:HS_MRPL22
Genevestigator:Q9NWU5 GermOnline:ENSG00000082515 Uniprot:Q9NWU5
Length = 206
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/112 (33%), Positives = 63/112 (56%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L+RGM ++ AL QL+ K+ AK + +V+ A+ A
Sbjct: 63 RPAEIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMA 122
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+H ++ L +AE+ G+G KR+ YH +GR GI + C V + E
Sbjct: 123 VRDHNVEFRSNLYIAESTSGRGQCLKRIRYHGRGRFGIMEKVYCHYFVKLVE 174
>UNIPROTKB|O62952 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:3329 "Picea abies" [GO:0043253 "chloroplast ribosome"
evidence=NAS] InterPro:IPR000048 InterPro:IPR001063
InterPro:IPR005727 InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 EMBL:U92462 PIR:T11808
ProteinModelPortal:O62952 SMR:O62952 GO:GO:0043253 Uniprot:O62952
Length = 142
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 38/114 (33%), Positives = 62/114 (54%)
Query: 109 KVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHN 168
+++A+ + I+ S K V +RG AL+ L++ A + Q+IHSA ANA HN
Sbjct: 12 EIRALARNIRMSAHKARKVINQIRGCSYGQALMILELMPYGACYPISQLIHSAAANANHN 71
Query: 169 HGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRELTAEEE 222
GL+ LLV+ V +G KRV ++GR +P C +T+V+ E++ +
Sbjct: 72 MGLNKANLLVSRVEVNEGAVFKRVQPRAQGRGYPIQKPTCHITIVLEEISRSND 125
>TIGR_CMR|CPS_0868 [details] [associations]
symbol:CPS_0868 "ribosomal protein L22" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 OMA:ASRINKR RefSeq:YP_267617.1
ProteinModelPortal:Q487Z8 SMR:Q487Z8 STRING:Q487Z8 GeneID:3521574
KEGG:cps:CPS_0868 PATRIC:21465029
BioCyc:CPSY167879:GI48-954-MONOMER Uniprot:Q487Z8
Length = 110
Score = 162 (62.1 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 112 AVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGL 171
A+ K + S +K LVA +RG+ VE AL L + K+AA+ V +V++SA ANA HN G
Sbjct: 5 AIHKFARGSAQKARLVADQIRGVNVEKALEILTFSNKKAAELVKKVLNSAIANAEHNEGA 64
Query: 172 DPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
D D L V + G KR+ +KGR+ ++ +TV+V +
Sbjct: 65 DIDELFVKTILIDDGPTMKRIMPRAKGRADRIIKRTSHITVIVSD 109
>UNIPROTKB|J3KQY1 [details] [associations]
symbol:MRPL22 "39S ribosomal protein L22, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 GO:GO:0006412
GO:GO:0003735 GO:GO:0015934 EMBL:AC008421 Gene3D:3.90.470.10
PANTHER:PTHR13501 SUPFAM:SSF54843 OMA:NRIVYPP EMBL:AC008410
HGNC:HGNC:14480 ChiTaRS:MRPL22 Ensembl:ENST00000439747
Uniprot:J3KQY1
Length = 232
Score = 167 (63.8 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 38/112 (33%), Positives = 63/112 (56%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L+RGM ++ AL QL+ K+ AK + +V+ A+ A
Sbjct: 89 RPAEIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMA 148
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+H ++ L +AE+ G+G KR+ YH +GR GI + C V + E
Sbjct: 149 VRDHNVEFRSNLYIAESTSGRGQCLKRIRYHGRGRFGIMEKVYCHYFVKLVE 200
>TIGR_CMR|BA_0115 [details] [associations]
symbol:BA_0115 "ribosomal protein L22" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10
HAMAP:MF_01331_B PANTHER:PTHR13501 SUPFAM:SSF54843
TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091
ProtClustDB:PRK00565 RefSeq:NP_842683.1 RefSeq:YP_016720.1
RefSeq:YP_026401.1 ProteinModelPortal:Q81VS5 SMR:Q81VS5
DNASU:1086393 EnsemblBacteria:EBBACT00000012430
EnsemblBacteria:EBBACT00000015593 EnsemblBacteria:EBBACT00000023495
GeneID:1086393 GeneID:2818196 GeneID:2852427 KEGG:ban:BA_0115
KEGG:bar:GBAA_0115 KEGG:bat:BAS0115 OMA:ASRINKR
BioCyc:BANT260799:GJAJ-126-MONOMER
BioCyc:BANT261594:GJ7F-128-MONOMER Uniprot:Q81VS5
Length = 113
Score = 161 (61.7 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 39/108 (36%), Positives = 64/108 (59%)
Query: 109 KVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHN 168
+ +AV + ++ +P+K+ LV L+RG +V +A+ L T K A+ V +V+ SA ANA HN
Sbjct: 2 QAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHN 61
Query: 169 HGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+ +D + L+V + FV +G KR + GR+ + +TVVV E
Sbjct: 62 YEMDINSLVVEKVFVDEGPTLKRFRPRAMGRASQINKRTSHITVVVSE 109
>RGD|1309277 [details] [associations]
symbol:Mrpl22 "mitochondrial ribosomal protein L22"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
RGD:1309277 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843 eggNOG:COG0091
CTD:29093 GeneTree:ENSGT00390000002110 HOGENOM:HOG000048027
HOVERGEN:HBG093486 OMA:NRIVYPP OrthoDB:EOG45490K EMBL:AABR03075027
IPI:IPI00369532 RefSeq:NP_001099251.1 UniGene:Rn.13421
ProteinModelPortal:P0C2C0 STRING:P0C2C0 PRIDE:P0C2C0
Ensembl:ENSRNOT00000029238 GeneID:287302 KEGG:rno:287302
UCSC:RGD:1309277 InParanoid:P0C2C0 NextBio:625813
Genevestigator:P0C2C0 Uniprot:P0C2C0
Length = 206
Score = 161 (61.7 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 37/112 (33%), Positives = 63/112 (56%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A L+RGM ++ AL QL+ K+ A+ + +V+ A+ A
Sbjct: 63 RPAEIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAQIIKEVLLEAQDMA 122
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+H ++ L +AE+ G+G KR+ YH +GR GI + C V + E
Sbjct: 123 VRDHNVEFRSNLHIAESTSGRGQCLKRIRYHGRGRFGIMEKVYCHYFVKLVE 174
>UNIPROTKB|P61181 [details] [associations]
symbol:rplV "50S ribosomal protein L22" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001063
InterPro:IPR005727 InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 EMBL:BX842574 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 ProtClustDB:PRK00565
OMA:TVYADEG PIR:E70642 RefSeq:NP_215220.1 RefSeq:NP_335150.1
RefSeq:YP_006514050.1 ProteinModelPortal:P61181 SMR:P61181
PRIDE:P61181 EnsemblBacteria:EBMYCT00000003193
EnsemblBacteria:EBMYCT00000071963 GeneID:13318595 GeneID:888359
GeneID:926023 KEGG:mtc:MT0733 KEGG:mtu:Rv0706 KEGG:mtv:RVBD_0706
PATRIC:18123343 TubercuList:Rv0706 Uniprot:P61181
Length = 197
Score = 160 (61.4 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 48/130 (36%), Positives = 71/130 (54%)
Query: 102 KVVSKPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSA 161
K P+ V A + ++ SP+K V LVRG V DAL L+ + A+ V +VI SA
Sbjct: 6 KATEYPSAV-AKARFVRVSPRKARRVIDLVRGRSVSDALDILRWAPQAASGPVAKVIASA 64
Query: 162 RANATHNHGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRELTAEE 221
ANA +N GLDP L+VA + +G KR+ ++GR+ R +TVVV A++
Sbjct: 65 AANAQNNGGLDPATLVVATVYADQGPTAKRIRPRAQGRAFRIRRRTSHITVVVESRPAKD 124
Query: 222 E--AQIARLR 229
+ A+ +R R
Sbjct: 125 QRSAKSSRAR 134
>TIGR_CMR|CBU_0243 [details] [associations]
symbol:CBU_0243 "ribosomal protein L22" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 OMA:ASRINKR EMBL:AF064946
RefSeq:NP_819287.1 ProteinModelPortal:O85387 SMR:O85387
PRIDE:O85387 GeneID:1208124 KEGG:cbu:CBU_0243 PATRIC:17929179
BioCyc:CBUR227377:GJ7S-249-MONOMER Uniprot:O85387
Length = 115
Score = 160 (61.4 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 41/114 (35%), Positives = 63/114 (55%)
Query: 109 KVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHN 168
+V A LK + S +K LVA VRG+ E A+ L+ + K+AA + +V+ SA ANA HN
Sbjct: 2 EVAAKLKYARISAQKARLVADQVRGLGAEQAVNLLRFSNKKAAALMKKVLDSAIANAEHN 61
Query: 169 HGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRELTAEEE 222
G D D L V+ V +G +R ++GR+ ++ C +TV V + E +
Sbjct: 62 EGADIDELKVSTVMVDEGPSARRFHARARGRANQILKRTCHITVKVSDSQVEND 115
>MGI|MGI:1333794 [details] [associations]
symbol:Mrpl22 "mitochondrial ribosomal protein L22"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001063
InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464 MGI:MGI:1333794
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843 eggNOG:COG0091
HSSP:P48286 CTD:29093 GeneTree:ENSGT00390000002110
HOGENOM:HOG000048027 HOVERGEN:HBG093486 OMA:NRIVYPP
OrthoDB:EOG45490K EMBL:AK077615 EMBL:AK086913 EMBL:AK164417
EMBL:AL928857 EMBL:BC061191 IPI:IPI00225318 RefSeq:NP_778166.2
UniGene:Mm.259907 ProteinModelPortal:Q8BU88 SMR:Q8BU88
STRING:Q8BU88 PhosphoSite:Q8BU88 PaxDb:Q8BU88 PRIDE:Q8BU88
Ensembl:ENSMUST00000020820 GeneID:216767 KEGG:mmu:216767
UCSC:uc007jap.2 InParanoid:Q8BU88 NextBio:375302 Bgee:Q8BU88
CleanEx:MM_MRPL22 Genevestigator:Q8BU88
GermOnline:ENSMUSG00000020514 Uniprot:Q8BU88
Length = 206
Score = 159 (61.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 36/112 (32%), Positives = 63/112 (56%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+PA++ + IK S K+ +A ++RGM ++ AL QL+ K+ A+ + +V+ A+ A
Sbjct: 63 RPAEIYHCRRQIKYSKDKMWYLAKMIRGMSIDQALAQLEFNDKKGAQIIKEVLLEAQDMA 122
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
+H ++ L +AE+ G+G KR+ YH +GR GI + C V + E
Sbjct: 123 VRDHNVEFRSNLHIAESTSGRGQCLKRIRYHGRGRFGIMEKVYCHYFVKLVE 174
>TIGR_CMR|SO_0236 [details] [associations]
symbol:SO_0236 "ribosomal protein L22" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 OMA:ASRINKR RefSeq:NP_715876.1
ProteinModelPortal:Q8EK63 SMR:Q8EK63 PRIDE:Q8EK63 GeneID:1168119
KEGG:son:SO_0236 PATRIC:23520165 Uniprot:Q8EK63
Length = 110
Score = 154 (59.3 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 40/99 (40%), Positives = 56/99 (56%)
Query: 118 KQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDRLL 177
+ S +K LVA +RG+ V AL L + K+AA V +V+ SA ANA HN G D D L
Sbjct: 11 RTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELK 70
Query: 178 VAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
V FV +G KR+ +KGR+ ++ +TVVV +
Sbjct: 71 VGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSD 109
>FB|FBgn0030786 [details] [associations]
symbol:mRpL22 "mitochondrial ribosomal protein L22"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237
PROSITE:PS00464 GO:GO:0006412 EMBL:AE014298 GO:GO:0005762
GO:GO:0003735 Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843
eggNOG:COG0091 CTD:29093 GeneTree:ENSGT00390000002110 OMA:NRIVYPP
EMBL:AY070969 RefSeq:NP_523379.2 UniGene:Dm.2751
ProteinModelPortal:Q9VXB5 SMR:Q9VXB5 IntAct:Q9VXB5 MINT:MINT-319934
STRING:Q9VXB5 PaxDb:Q9VXB5 PRIDE:Q9VXB5 EnsemblMetazoa:FBtr0074330
GeneID:32662 KEGG:dme:Dmel_CG4742 FlyBase:FBgn0030786
InParanoid:Q9VXB5 OrthoDB:EOG469P9T PhylomeDB:Q9VXB5
GenomeRNAi:32662 NextBio:779717 Bgee:Q9VXB5 Uniprot:Q9VXB5
Length = 233
Score = 161 (61.7 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 40/101 (39%), Positives = 55/101 (54%)
Query: 117 IKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLD-PDR 175
IK SP K+ +AA VRGM V++AL QL +K+ A V + I A+ A H ++
Sbjct: 99 IKYSPDKMWYIAAFVRGMSVDEALKQLNFVLKKGATDVKETILEAQQIAVERHNVEYKSN 158
Query: 176 LLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
L +AE+FVGKG K V H++GR G C V + E
Sbjct: 159 LWIAESFVGKGRVFKGVRRHARGRFGKVEYKHCHYFVRLEE 199
>UNIPROTKB|Q29IK4 [details] [associations]
symbol:mRpL22 "39S ribosomal protein L22, mitochondrial"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 EMBL:CH379063
GO:GO:0015934 Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843
eggNOG:COG0091 OrthoDB:EOG469P9T RefSeq:XP_001355590.2
GeneID:4815928 KEGG:dpo:Dpse_GA18397 FlyBase:FBgn0078399
InParanoid:Q29IK4 Uniprot:Q29IK4
Length = 233
Score = 161 (61.7 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 42/112 (37%), Positives = 59/112 (52%)
Query: 106 KPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANA 165
+ A V + IK SP K+ +AA VRGM V++AL QL +K+ A V + I A+ A
Sbjct: 88 RKAYVCHMRSNIKYSPDKMWYIAAFVRGMSVDEALKQLNFVLKKGATDVKETILEAQEMA 147
Query: 166 THNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
H ++ L VAE+FVGKG K + H++GR G C V + E
Sbjct: 148 VQRHNVEYKSNLWVAESFVGKGRVFKGMRRHARGRFGQVEYKHCHYFVRLEE 199
>TIGR_CMR|DET_0479 [details] [associations]
symbol:DET_0479 "ribosomal protein L22" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
GO:GO:0006412 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 ProtClustDB:PRK00565
OMA:ASRINKR RefSeq:YP_181223.1 ProteinModelPortal:Q3Z976
STRING:Q3Z976 GeneID:3230150 KEGG:det:DET0479 PATRIC:21608027
BioCyc:DETH243164:GJNF-479-MONOMER Uniprot:Q3Z976
Length = 109
Score = 140 (54.3 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 33/108 (30%), Positives = 59/108 (54%)
Query: 109 KVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHN 168
+V+A++K S K+ L +VRG +V +A+ L+ AK V +VI SA ANA +N
Sbjct: 2 EVKAIVKDTGYSALKVRLCVDMVRGKKVSEAITMLRFMTSPTAKVVSKVIKSAAANAENN 61
Query: 169 HGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRE 216
++P L +++ + + KR+ ++GR ++ +TVVV +
Sbjct: 62 FQMNPADLKISQIYADEARMLKRMRPQARGRVSPILKRSSHITVVVAD 109
>TIGR_CMR|GSU_2852 [details] [associations]
symbol:GSU_2852 "ribosomal protein L22" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR001063
InterPro:IPR005727 InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464
GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 ProtClustDB:PRK00565
OMA:ASRINKR RefSeq:NP_953895.1 ProteinModelPortal:Q748Z3 SMR:Q748Z3
GeneID:2688710 KEGG:gsu:GSU2852 PATRIC:22028551
BioCyc:GSUL243231:GH27-2826-MONOMER Uniprot:Q748Z3
Length = 111
Score = 136 (52.9 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 39/109 (35%), Positives = 58/109 (53%)
Query: 109 KVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHN 168
+ A L + SP+K LV +VRG ++DAL L+ + + +AK V +++ SA ANA
Sbjct: 2 EASAKLTFARLSPRKTRLVVDMVRGKGIQDALTILRFSPQASAKLVSKLLRSAVANAEQK 61
Query: 169 HGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVR-PECRLTVVVRE 216
D DRL V V G KR + GR+ K+R P +TVV+ +
Sbjct: 62 GASDVDRLYVKSISVDGGPVLKRFVPRAMGRAS-KIRKPTSHITVVLAD 109
>DICTYBASE|DDB_G0279519 [details] [associations]
symbol:mrpl22 "ribosomal protein L22, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237
PROSITE:PS00464 dictyBase:DDB_G0279519 GO:GO:0005739
GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0003735
EMBL:AAFI02000031 GO:GO:0015934 Gene3D:3.90.470.10
PANTHER:PTHR13501 SUPFAM:SSF54843 RefSeq:XP_641674.1
ProteinModelPortal:Q54WP3 STRING:Q54WP3 EnsemblProtists:DDB0267022
GeneID:8622082 KEGG:ddi:DDB_G0279519 eggNOG:NOG263456 OMA:AASTNIF
Uniprot:Q54WP3
Length = 237
Score = 138 (53.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 35/140 (25%), Positives = 73/140 (52%)
Query: 100 DQKVVSKPAKVQAV-LKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVI 158
++KV + K+ V L+ + S K+ + + G+ + +A+ QL T +K + +I
Sbjct: 87 EEKVKVEDNKIVRVSLQKLGYSEWKLMALFKALSGLSLREAMAQLSFTEHSPSKKLRGLI 146
Query: 159 HSARANATHNHGLDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRELT 218
A A + G+DP+RL++++ + G+ F+K+ + + +G+ +P C ++V ++E
Sbjct: 147 KHAAHVAENIKGMDPERLIISQIWAGRSFYKRSIMWKGRGQGSTIRKPFCHVSVEIKE-- 204
Query: 219 AEEEAQIARLRVHKFRKLTK 238
E + +V KF K K
Sbjct: 205 --SEFKDGEKKVGKFGKTNK 222
>POMBASE|SPCC1739.02c [details] [associations]
symbol:mrpl22 "mitochondrial ribosomal protein subunit
L22 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=NAS]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
PomBase:SPCC1739.02c EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005762 GO:GO:0003735 GO:GO:0032543 Gene3D:3.90.470.10
PANTHER:PTHR13501 SUPFAM:SSF54843 eggNOG:COG0091 PIR:T41110
RefSeq:NP_588410.1 ProteinModelPortal:O74464 STRING:O74464
EnsemblFungi:SPCC1739.02c.1 GeneID:2538941 KEGG:spo:SPCC1739.02c
OrthoDB:EOG4350GJ NextBio:20800117 Uniprot:O74464
Length = 249
Score = 137 (53.3 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 43/141 (30%), Positives = 72/141 (51%)
Query: 117 IKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPDRL 176
++ S KK+ + + ALLQ++++ K+ +K + + SAR NA GLD L
Sbjct: 112 LRSSLKKVGALCRQIAHKPFYHALLQMKMSDKKISKYIATALVSARENAVREAGLDESTL 171
Query: 177 LVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVVRELTAEEEAQIARLRVHKFRKL 236
V + +VGK + K++ +G I+ P R+TVV+R+ E A + R L
Sbjct: 172 YVDQIWVGKAKYLKKLITMGRGGRAIERSPRVRVTVVLRD----ERALL--------RDL 219
Query: 237 TKREQRLVPHQLIETTPIWNR 257
+R+QRL ++ TP+ NR
Sbjct: 220 QRRQQRLERKKV--WTPLPNR 238
>TIGR_CMR|CJE_1870 [details] [associations]
symbol:CJE_1870 "ribosomal protein L22" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0009292 "genetic transfer"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 RefSeq:YP_179840.1
ProteinModelPortal:Q5HS95 STRING:Q5HS95 GeneID:3232497
KEGG:cjr:CJE1870 PATRIC:20045572 OMA:TVYADEG
BioCyc:CJEJ195099:GJC0-1909-MONOMER Uniprot:Q5HS95
Length = 141
Score = 117 (46.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 111 QAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHG 170
+A++K I+ SP K L+A VRGM E A+ L+ + AK + I SA AN G
Sbjct: 3 KALIKFIRLSPTKARLIAREVRGMNAELAMASLKFMPNKGAKYIANAISSAVANG----G 58
Query: 171 LDPDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVR-PECRLTVVVR--ELTAEEEAQIAR 227
+ + ++V V KR ++G S ++R P + V V E+ AEE+ +A+
Sbjct: 59 FEANEVIVKSCRVDAAAVLKRFRPRARG-SASRIRKPTSHILVEVAKAEVKAEEKKTVAK 117
>UNIPROTKB|P0C444 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 EMBL:AY522331 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 ProtClustDB:CHL00034 Gene3D:3.90.470.10
HAMAP:MF_01331_B PANTHER:PTHR13501 SUPFAM:SSF54843
TIGRFAMs:TIGR01044 RefSeq:NP_001175475.1 RefSeq:NP_039425.1
UniGene:Os.81075 ProteinModelPortal:P0C444 SMR:P0C444 PRIDE:P0C444
GeneID:3131426 GeneID:9272040 KEGG:osa:3131426 KEGG:osa:9272040
Gramene:P0C444 HOGENOM:HOG000205046 KO:K02890 Genevestigator:P0C444
Uniprot:P0C444
Length = 149
Score = 109 (43.4 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 115 KGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPD 174
K I S K+ V +R E+ ++ L + RA+ + ++++SA ANATH D
Sbjct: 43 KRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKA 102
Query: 175 RLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVV 214
L + +A V + + ++GRS + C +T+V+
Sbjct: 103 NLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVL 142
>UNIPROTKB|P0C445 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 EMBL:AY522329 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 ProtClustDB:CHL00034 Gene3D:3.90.470.10
HAMAP:MF_01331_B PANTHER:PTHR13501 SUPFAM:SSF54843
TIGRFAMs:TIGR01044 UniGene:Os.81075 RefSeq:YP_654243.1
ProteinModelPortal:P0C445 SMR:P0C445 PRIDE:P0C445 GeneID:4126901
Gramene:P0C445 Uniprot:P0C445
Length = 149
Score = 109 (43.4 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 115 KGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPD 174
K I S K+ V +R E+ ++ L + RA+ + ++++SA ANATH D
Sbjct: 43 KRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKA 102
Query: 175 RLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVV 214
L + +A V + + ++GRS + C +T+V+
Sbjct: 103 NLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVL 142
>UNIPROTKB|P0C446 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 EMBL:X15901 EMBL:AY522330
GenomeReviews:AY522330_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
ProtClustDB:CHL00034 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
RefSeq:NP_001175475.1 RefSeq:NP_039425.1 UniGene:Os.81075
GeneID:3131426 GeneID:9272040 KEGG:osa:3131426 KEGG:osa:9272040
KO:K02890 EMBL:AP005161 EMBL:AP003825 EMBL:AP005452 EMBL:AP005683
EMBL:AP005707 EMBL:M22826 PIR:JQ0266 ProteinModelPortal:P0C446
SMR:P0C446 STRING:P0C446 EnsemblPlants:LOC_Os04g16822.1
EnsemblPlants:LOC_Os08g15268.1 EnsemblPlants:LOC_Os09g24414.1
EnsemblPlants:LOC_Osp1g00740.1 Gramene:P0C446 eggNOG:COG0091
OMA:MCHITIV Uniprot:P0C446
Length = 149
Score = 109 (43.4 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 115 KGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPD 174
K I S K+ V +R E+ ++ L + RA+ + ++++SA ANATH D
Sbjct: 43 KRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKA 102
Query: 175 RLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVV 214
L + +A V + + ++GRS + C +T+V+
Sbjct: 103 NLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVL 142
>UNIPROTKB|Q6END4 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 EMBL:AP006728
GO:GO:0015934 RefSeq:YP_052789.1 ProteinModelPortal:Q6END4
SMR:Q6END4 GeneID:2885899 Gramene:Q6END4 ProtClustDB:CHL00034
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 Uniprot:Q6END4
Length = 149
Score = 109 (43.4 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 115 KGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARANATHNHGLDPD 174
K I S K+ V +R E+ ++ L + RA+ + ++++SA ANATH D
Sbjct: 43 KRIHMSVFKVQRVLDEIRWRYYEETVMILNLMPYRASYPILKLVYSAAANATHYRDFDKA 102
Query: 175 RLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLTVVV 214
L + +A V + + ++GRS + C +T+V+
Sbjct: 103 NLFITKAEVSRSTIMNKFRPRARGRSSPIKKTMCHITIVL 142
>SGD|S000005121 [details] [associations]
symbol:MRPL22 "Mitochondrial ribosomal protein of the large
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=IPI] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
SGD:S000005121 EMBL:BK006947 GO:GO:0005762 GO:GO:0003735
GO:GO:0032543 Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843
eggNOG:COG0091 EMBL:Z71453 PIR:S63132 RefSeq:NP_014222.2
ProteinModelPortal:P53881 SMR:P53881 IntAct:P53881
MINT:MINT-2787576 STRING:P53881 PaxDb:P53881 PeptideAtlas:P53881
EnsemblFungi:YNL177C GeneID:855544 KEGG:sce:YNL177C CYGD:YNL177c
HOGENOM:HOG000248157 OMA:LNNEPLN OrthoDB:EOG4BCHX8 NextBio:979613
Genevestigator:P53881 GermOnline:YNL177C Uniprot:P53881
Length = 309
Score = 120 (47.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 38/132 (28%), Positives = 66/132 (50%)
Query: 104 VSKPAKVQAVLKGIKQSPKKINLVAALVRGMRVEDALLQLQVTIKRAAKTVYQVIHSARA 163
V +P+ V A IK S KK L+ L+ G+ V A+ Q + K+ A+ V +++
Sbjct: 158 VLEPS-VYAQSYRIKSSMKKATLLLRLLGGLDVMKAISQCHFSNKKIAREVAELLQKGVK 216
Query: 164 NATHNHGLDPDRLLVAEAFVGK-GFFKKRVSYHSKGRSGIKVRPECRLTVVVR--ELTAE 220
+ GL P+ L +++ + G GF++KRV + ++ R GI P + ++R +T
Sbjct: 217 DG-QKLGLKPEDLYISQIWTGSDGFWRKRVEFKARTRIGIISHPYIHVRCILRTKSVTKR 275
Query: 221 EEAQIARLRVHK 232
A A L+ K
Sbjct: 276 RLAYEAHLKEQK 287
>UNIPROTKB|F1RQC9 [details] [associations]
symbol:LOC100739413 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001063
InterPro:IPR005727 Pfam:PF00237 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 Gene3D:3.90.470.10 PANTHER:PTHR13501 SUPFAM:SSF54843
GeneTree:ENSGT00390000002110 EMBL:CU856697
Ensembl:ENSSSCT00000018580 OMA:PFFSLFK Uniprot:F1RQC9
Length = 101
Score = 95 (38.5 bits), Expect = 0.00024, P = 0.00024
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 153 TVYQVIHSARANATHNHGLD-PDRLLVAEAFVGKGFFKKRVSYHSKGRSGIKVRPECRLT 211
++++V+ A+ A +H ++ L VAE+ G+G + KR+ YH +GR GI + C
Sbjct: 5 SLFKVLLEAQDMAVRDHNVEFRSNLYVAESTSGRGQYLKRIRYHGRGRFGIMEKVFCHYF 64
Query: 212 V-VVRELTAEEEAQIARLRVHKFRKLTKREQRLVPHQL 248
V +V EA + H + + R + H L
Sbjct: 65 VKLVEGPPPPREAPKTAV-AHAREYIQELRNRTITHAL 101
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.373 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 270 255 0.00085 114 3 11 22 0.45 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 604 (64 KB)
Total size of DFA: 181 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.49u 0.08s 23.57t Elapsed: 00:00:02
Total cpu time: 23.49u 0.08s 23.57t Elapsed: 00:00:02
Start: Mon May 20 19:26:50 2013 End: Mon May 20 19:26:52 2013