Query 040450
Match_columns 211
No_of_seqs 56 out of 58
Neff 3.3
Searched_HMMs 29240
Date Mon Mar 25 13:37:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040450.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040450hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wpn_A Manganese-dependent ino 97.2 0.001 3.4E-08 52.9 7.2 111 85-202 4-129 (188)
2 2zxr_A Single-stranded DNA spe 97.0 0.00076 2.6E-08 65.6 5.5 120 69-198 59-193 (666)
3 3dma_A Exopolyphosphatase-rela 96.7 0.0033 1.1E-07 55.7 7.3 123 72-202 11-155 (343)
4 3dev_A SH1221; alpha-beta prot 96.7 0.0025 8.4E-08 56.1 6.3 111 83-202 16-136 (320)
5 1k20_A Manganese-dependent ino 96.0 0.014 4.9E-07 50.3 7.0 112 85-202 3-130 (310)
6 2haw_A Manganese-dependent ino 95.6 0.029 1E-06 48.1 7.2 112 85-203 4-130 (309)
7 2eb0_A Manganese-dependent ino 94.4 0.056 1.9E-06 46.3 5.6 106 86-202 3-119 (307)
8 2qb7_A Exopolyphosphatase; A/B 93.0 0.057 1.9E-06 48.2 3.3 59 137-203 122-180 (397)
9 2k0z_A Uncharacterized protein 72.6 7.7 0.00026 27.7 5.5 50 80-134 53-102 (110)
10 1e0c_A Rhodanese, sulfurtransf 69.4 8.6 0.00029 31.2 5.7 50 66-118 63-114 (271)
11 3aay_A Putative thiosulfate su 67.9 11 0.00039 30.6 6.2 52 65-119 207-260 (277)
12 2jtq_A Phage shock protein E; 62.0 16 0.00054 24.6 5.1 40 75-117 33-72 (85)
13 1uar_A Rhodanese; sulfurtransf 61.7 15 0.00051 30.0 5.7 52 65-119 214-267 (285)
14 3hix_A ALR3790 protein; rhodan 59.6 12 0.00042 26.5 4.3 33 82-117 51-83 (106)
15 3hzu_A Thiosulfate sulfurtrans 54.7 16 0.00054 31.1 4.9 66 65-135 242-309 (318)
16 2hhg_A Hypothetical protein RP 54.4 15 0.00053 26.7 4.2 35 81-118 84-118 (139)
17 2wlr_A Putative thiosulfate su 54.1 24 0.00081 31.1 6.1 53 64-119 183-236 (423)
18 3ilm_A ALR3790 protein; rhodan 53.4 9.9 0.00034 28.7 3.1 35 81-118 54-88 (141)
19 3olh_A MST, 3-mercaptopyruvate 52.6 17 0.00058 30.6 4.7 41 65-108 235-276 (302)
20 1e0c_A Rhodanese, sulfurtransf 49.8 20 0.00067 29.0 4.5 51 66-119 205-256 (271)
21 1urh_A 3-mercaptopyruvate sulf 48.7 33 0.0011 27.9 5.7 52 65-119 211-263 (280)
22 2fsx_A RV0390, COG0607: rhodan 48.0 24 0.00082 26.3 4.5 36 81-119 78-113 (148)
23 3foj_A Uncharacterized protein 47.6 26 0.00091 24.2 4.4 26 82-110 55-80 (100)
24 1gmx_A GLPE protein; transfera 47.5 22 0.00074 25.0 3.9 34 81-117 56-89 (108)
25 3gk5_A Uncharacterized rhodane 44.0 34 0.0012 24.2 4.6 33 81-117 53-85 (108)
26 3g5j_A Putative ATP/GTP bindin 43.7 26 0.00088 24.8 3.9 24 84-110 90-114 (134)
27 1urh_A 3-mercaptopyruvate sulf 41.8 40 0.0014 27.4 5.3 51 65-118 67-119 (280)
28 1wv9_A Rhodanese homolog TT165 41.4 34 0.0012 23.4 4.1 24 84-110 54-77 (94)
29 3eme_A Rhodanese-like domain p 40.3 34 0.0012 23.7 4.0 33 82-118 55-87 (103)
30 3hzu_A Thiosulfate sulfurtrans 39.6 44 0.0015 28.3 5.3 50 66-118 93-144 (318)
31 3d1p_A Putative thiosulfate su 37.4 96 0.0033 22.5 6.3 43 65-110 72-115 (139)
32 3i2v_A Adenylyltransferase and 37.2 27 0.00092 24.6 3.1 23 84-109 73-95 (127)
33 1tq1_A AT5G66040, senescence-a 36.9 35 0.0012 24.8 3.8 41 66-110 66-106 (129)
34 3tp9_A Beta-lactamase and rhod 35.9 1.3E+02 0.0043 26.6 7.8 32 81-116 324-355 (474)
35 1uar_A Rhodanese; sulfurtransf 35.3 52 0.0018 26.7 4.9 51 65-118 60-112 (285)
36 3etn_A Putative phosphosugar i 35.2 1.3E+02 0.0046 23.8 7.3 77 96-176 71-154 (220)
37 1rhs_A Sulfur-substituted rhod 34.1 45 0.0016 27.5 4.4 48 68-118 76-127 (296)
38 3sho_A Transcriptional regulat 34.1 1.3E+02 0.0043 22.6 6.7 80 94-176 49-133 (187)
39 3trj_A Phosphoheptose isomeras 33.9 1.6E+02 0.0053 23.2 7.4 89 87-175 49-159 (201)
40 3utn_X Thiosulfate sulfurtrans 33.0 45 0.0015 29.2 4.4 54 62-117 91-145 (327)
41 3aay_A Putative thiosulfate su 32.4 73 0.0025 25.7 5.3 51 65-118 58-110 (277)
42 1vee_A Proline-rich protein fa 31.2 83 0.0028 22.9 5.1 49 81-132 72-122 (134)
43 1muk_A Minor core protein lamb 31.1 12 0.00042 38.8 0.5 26 177-202 575-600 (1267)
44 1qxn_A SUD, sulfide dehydrogen 30.0 41 0.0014 24.9 3.2 34 81-117 80-113 (137)
45 2eg4_A Probable thiosulfate su 29.4 71 0.0024 25.2 4.7 37 79-119 180-216 (230)
46 2wlr_A Putative thiosulfate su 28.7 1.2E+02 0.004 26.6 6.4 52 65-119 339-391 (423)
47 3p1t_A Putative histidinol-pho 27.6 2.3E+02 0.0077 22.4 8.8 110 71-191 80-199 (337)
48 1okg_A Possible 3-mercaptopyru 27.4 53 0.0018 28.8 3.9 48 67-118 78-128 (373)
49 3iwh_A Rhodanese-like domain p 27.1 53 0.0018 23.5 3.3 27 81-110 54-80 (103)
50 2d1s_A Luciferase, luciferin 4 25.0 2.6E+02 0.0089 24.7 8.0 26 80-105 74-99 (548)
51 1rhs_A Sulfur-substituted rhod 24.6 1.2E+02 0.004 25.0 5.3 52 65-119 221-273 (296)
52 3olh_A MST, 3-mercaptopyruvate 24.5 83 0.0028 26.3 4.5 48 68-118 91-142 (302)
53 2l5b_A Activator of apoptosis 24.4 15 0.00052 23.0 -0.1 17 93-109 13-29 (32)
54 3l8c_A D-alanine--poly(phospho 24.0 2.3E+02 0.0079 24.5 7.3 59 80-166 51-109 (521)
55 1uu1_A Histidinol-phosphate am 23.8 2.8E+02 0.0096 22.2 8.4 95 86-191 99-203 (335)
56 2v7b_A Benzoate-coenzyme A lig 23.6 2E+02 0.007 25.0 6.9 25 81-105 71-95 (529)
57 2eg4_A Probable thiosulfate su 23.0 1.3E+02 0.0046 23.6 5.2 32 83-118 61-93 (230)
58 3qgu_A LL-diaminopimelate amin 22.8 3E+02 0.01 23.1 7.6 35 134-169 209-252 (449)
59 3rix_A Luciferase, luciferin 4 22.2 2.8E+02 0.0096 24.4 7.6 27 79-105 71-97 (550)
60 3fce_A D-alanine--poly(phospho 21.7 2.8E+02 0.0097 24.0 7.4 58 80-165 48-105 (512)
61 3ele_A Amino transferase; RER0 21.0 2.8E+02 0.0097 22.6 6.9 101 85-191 125-249 (398)
62 3g7s_A Long-chain-fatty-acid-- 20.7 2.8E+02 0.0095 24.4 7.3 59 80-166 74-132 (549)
63 1v25_A Long-chain-fatty-acid-C 20.3 2.3E+02 0.0077 25.0 6.6 26 80-105 69-94 (541)
No 1
>1wpn_A Manganese-dependent inorganic pyrophosphatase; metal binding, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.107.1.1
Probab=97.17 E-value=0.001 Score=52.91 Aligned_cols=111 Identities=13% Similarity=0.086 Sum_probs=62.4
Q ss_pred cEEEEcc-CCCCcHHHHHHHHHhhccCCCcee-eeCCccc-------C------CccccccccCCcceEEEEecCCChhH
Q 040450 85 NLTLYNY-PSPSGSLSALFAHLFHFHLNLPCL-LLPFSSV-------E------PLRVEDLCIEGLERVYLLDFLGPKGF 149 (211)
Q Consensus 85 ~lVLYHy-pC~DGf~AAlAAhL~~~~~~~p~~-flP~s~~-------~------P~~veDlp~~~~~~VYILDFSfp~~f 149 (211)
.+++=|. |=+|+.+||++...+.+..+..+. ++|...- + +--+++++ .+...+++||.+-+...
T Consensus 4 i~I~gH~~pD~DaigSa~al~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~vi~VD~~~~~r~ 82 (188)
T 1wpn_A 4 ILIFGHQNPDTDTICSAIAYADLKNKLGFNAEPVRLGQVNGETQYALDYFKQESPRLVETAA-NEVNGVILVDHNERQQS 82 (188)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEESSCCCHHHHHHHHHTTCCCCEECSCST-TTCSEEEEESCCCGGGS
T ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCCchhhhhhhc-cCCCeEEEEeCCCcccc
Confidence 4566676 568999999998887766554433 3453211 0 00011221 22257999999876532
Q ss_pred HHHHhhhCCCcEEEeecchhhHhhhcCCCCCCeEEEEecCCCcchhhHHhhhh
Q 040450 150 ADALSRRSSCEVIGFDHRKSVLGQITSDHPDKVTFYVDLEKSSSTAAYEYFSS 202 (211)
Q Consensus 150 l~~Ls~ka~~sVIvLDHHKSA~e~L~~~~~~nl~i~FDMeKSGA~lAwdYF~~ 202 (211)
-..+ ++.. .|+++|||.+.-. .....+..+..--=|.+.|.|++|..
T Consensus 83 ~~~~-~~~~-~vivIDHH~~~~~----~~~~~~~~~~~~~~St~~lv~~~~~~ 129 (188)
T 1wpn_A 83 IKDI-EEVQ-VLEVIDHHRIANF----ETAEPLYYRAEPVGCTATILNKMYKE 129 (188)
T ss_dssp CTTG-GGSE-EEEEEECSCCCSC----CCSSCCEEEECSSSCHHHHHHHHHHH
T ss_pred hhhh-ccCC-eEEEECCCCCCCC----CCCCCeEEEeccccHHHHHHHHHHHH
Confidence 2223 3453 7899999986321 00122333333333556799999874
No 2
>2zxr_A Single-stranded DNA specific exonuclease RECJ; DNA repair, hydrolase; 2.15A {Thermus thermophilus} PDB: 2zxo_A 2zxp_A 1ir6_A
Probab=96.95 E-value=0.00076 Score=65.58 Aligned_cols=120 Identities=16% Similarity=0.060 Sum_probs=62.6
Q ss_pred hhHHHHHHHhcccCCccEEEEccCCCCcHHHHHHHHHhhccCCCcee-eeCCccc-----CCccccccccCCcceEEEEe
Q 040450 69 DAALEAISKAGEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCL-LLPFSSV-----EPLRVEDLCIEGLERVYLLD 142 (211)
Q Consensus 69 ~aaleai~~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~-flP~s~~-----~P~~veDlp~~~~~~VYILD 142 (211)
+.|++.|..+-.+..+.+++=|| =.||.+|+.+...+.+..+..+. ++|...- .+-.++++. .+..-+++||
T Consensus 59 ~~Av~~i~~aI~~~ekI~I~GH~-D~DGi~Saa~L~~~L~~lG~~v~~~ip~r~~egygl~~~~I~~~~-~~~~LIItVD 136 (666)
T 2zxr_A 59 REAAALLEEALRQGKRIRVHGDY-DADGLTGTAILVRGLAALGADVHPFIPHRLEEGYGVLMERVPEHL-EASDLFLTVD 136 (666)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCS-SHHHHHHHHHHHHHHHHTTCEEEECCC---------------------CCEEEESC
T ss_pred HHHHHHHHHHHHcCCeEEEEecc-CCchHHHHHHHHHHHHHcCCcEEEecCCCCCccccCCHHHHHhhc-cCCCEEEEEc
Confidence 45677777776666666777777 67899999999988888766544 4454211 122334432 3457899999
Q ss_pred cCCChhH-HHHHhhhCCCcEEEeecchhhHhhhcCCCCCCeEEEEecCC--------CcchhhHH
Q 040450 143 FLGPKGF-ADALSRRSSCEVIGFDHRKSVLGQITSDHPDKVTFYVDLEK--------SSSTAAYE 198 (211)
Q Consensus 143 FSfp~~f-l~~Ls~ka~~sVIvLDHHKSA~e~L~~~~~~nl~i~FDMeK--------SGA~lAwd 198 (211)
..-+.-. +..+.+.. ..||++|||...- ..|+. .++|-+. +||.+||+
T Consensus 137 ~G~~s~~~i~~a~~~g-~~VIViDHH~~~~-----~~p~a--~iVnP~~~s~~~k~L~gaGVaf~ 193 (666)
T 2zxr_A 137 CGITNHAELRELLENG-VEVIVTDHHTPGK-----TPPPG--LVVHPALTPDLKEKPTGAGVAFL 193 (666)
T ss_dssp CC---------------CEEEEECCCC---------------CEECGGGSTTCCCCCCHHHHHHH
T ss_pred CCchhhhhHHHHHhCC-CCEEEECCcCCCC-----cCCCe--EEEcCCCCCCCCCCCCHHHHHHH
Confidence 8655422 22333334 4899999997643 23333 3567766 56666654
No 3
>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis}
Probab=96.73 E-value=0.0033 Score=55.66 Aligned_cols=123 Identities=16% Similarity=0.086 Sum_probs=70.8
Q ss_pred HHHHHHhcccCCccEEEEccC-CCCcHHHHHHHHHhhccCCCcee-eeCCcccCCcc----ccccc------c------C
Q 040450 72 LEAISKAGEERVKNLTLYNYP-SPSGSLSALFAHLFHFHLNLPCL-LLPFSSVEPLR----VEDLC------I------E 133 (211)
Q Consensus 72 leai~~~~~~~~p~lVLYHyp-C~DGf~AAlAAhL~~~~~~~p~~-flP~s~~~P~~----veDlp------~------~ 133 (211)
+++|..+-.+....+++=|++ =+|..+||++...+.+..+.++. ++|...-..++ .+++. . .
T Consensus 11 ~~~l~~~i~~~~~i~I~~H~~pD~DaiGS~~~l~~~l~~~g~~~~~~~~~~~~~~~~fl~~~~~i~~~~~~~~~~~~~~~ 90 (343)
T 3dma_A 11 IDHFTKWFERADKIVIVSHVSPDGDAIGSSLGLYHFLDSQDKIVNVIVPNAFPDFLKWMPGSKDILLYDRYQEFADKLIM 90 (343)
T ss_dssp HHHHHHHHHHCSEEEEEECSSCCHHHHHHHHHHHHHHHHTSCEEEEEESSCCCGGGTTSTTGGGCEETTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHHHHHHcCCCEEEECCCCCchHhhhccCcchhcccccChHHHhhccc
Confidence 444443333334556666763 44559999999988887776654 34432211110 01111 0 1
Q ss_pred CcceEEEEecCCChhH---HHHHhhhCCCcEEEeecchhhHhhhcCCCCCCeEEEEecCCC-cchhhHHhhhh
Q 040450 134 GLERVYLLDFLGPKGF---ADALSRRSSCEVIGFDHRKSVLGQITSDHPDKVTFYVDLEKS-SSTAAYEYFSS 202 (211)
Q Consensus 134 ~~~~VYILDFSfp~~f---l~~Ls~ka~~sVIvLDHHKSA~e~L~~~~~~nl~i~FDMeKS-GA~lAwdYF~~ 202 (211)
+...+++||.+-|.-. ...+.+... .||+||||.+.-. .+ . ...+|-+-| -+.|.|++|..
T Consensus 91 ~~~lvi~VD~~~~~r~~~~~~~l~~~~~-~~ivIDHH~~~~~-----~~-~-~~~i~~~~~ST~eiv~~l~~~ 155 (343)
T 3dma_A 91 EADVICCLDFNALKRIDEMSDIVAASPG-RKIMIDHHLYPED-----FC-R-ITISHPEISSTSELVFRLICR 155 (343)
T ss_dssp HCSEEEEESCSSGGGGTTCHHHHHHCCS-EEEEEECCSSCCS-----CS-S-EEEECTTSSCHHHHHHHHHHH
T ss_pred CCCEEEEEeCCChHHhchhHHHHHhCCC-CEEEEcCCCCCCC-----CC-c-eEEEecCcCcHHHHHHHHHHH
Confidence 3468999999987643 234555564 8999999998431 22 2 234565433 34689999864
No 4
>3dev_A SH1221; alpha-beta protein., structural genomics, PSI-2, protein STR initiative, northeast structural genomics consortium, NESG; 3.10A {Staphylococcus haemolyticus}
Probab=96.71 E-value=0.0025 Score=56.08 Aligned_cols=111 Identities=17% Similarity=0.130 Sum_probs=64.2
Q ss_pred CccEEEEcc-CCCCcHHHHHHHHHhhccC--CCceeeeCCcccCCcc----cccccc--CCcceEEEEecCCChhHHHHH
Q 040450 83 VKNLTLYNY-PSPSGSLSALFAHLFHFHL--NLPCLLLPFSSVEPLR----VEDLCI--EGLERVYLLDFLGPKGFADAL 153 (211)
Q Consensus 83 ~p~lVLYHy-pC~DGf~AAlAAhL~~~~~--~~p~~flP~s~~~P~~----veDlp~--~~~~~VYILDFSfp~~fl~~L 153 (211)
...+++=|. |=+|..+||++...+.+.. +..+.+ +...-+.+. .+++.. .+...|++||++-+.-.-..+
T Consensus 16 ~~i~I~~H~~PD~DaigSalal~~~l~~~~~~k~v~~-~~~~~~~~~fl~~~~~i~~~~~~~~lvi~VD~~~~~r~~~~~ 94 (320)
T 3dev_A 16 ETIIIHRHVRPDPDAYGSQLGLKLYLERKFPEKNIYA-TGEAEPSLSFIGDLDEIDDSVYSDALVIVCDTANAPRIDDQR 94 (320)
T ss_dssp SEEEEECBSSCCHHHHHHHHHHHHHHHHHCTTSEEEE-CCCCCGGGTTTCCCCCCCSSTTTTCEEEEESCSSGGGBSSGG
T ss_pred CeEEEEeCCCCCchHHHHHHHHHHHHHHhCCCCEEEE-eCCCcchhhhccCcccccccccCCCEEEEECCCCchhcchhh
Confidence 345666676 5677799999998776654 333333 221111010 122221 123679999999776432223
Q ss_pred hhhCCCcEEEeecchhhHhhhcCCCCCCeEEEEecCCCc-chhhHHhhhh
Q 040450 154 SRRSSCEVIGFDHRKSVLGQITSDHPDKVTFYVDLEKSS-STAAYEYFSS 202 (211)
Q Consensus 154 s~ka~~sVIvLDHHKSA~e~L~~~~~~nl~i~FDMeKSG-A~lAwdYF~~ 202 (211)
-.++. .|++||||.+.- ..+ .+ ..+|-+-|+ +.|.|++|..
T Consensus 95 ~~~~~-~vivIDHH~~~~-----~~~-~~-~~i~p~~~St~eiv~~~~~~ 136 (320)
T 3dev_A 95 YLNGQ-SLIKIDHHPATD-----QYG-DV-NFVNTEASSTSEIIFDFISH 136 (320)
T ss_dssp GGSSS-CEEEEECSCSSC-----CCS-SE-EEECTTSSCHHHHHHHHHHT
T ss_pred hhccC-CEEEEcCCCCCC-----CCC-Ce-EEEecCCCcHHHHHHHHHHH
Confidence 34564 899999998742 122 22 345654444 3699999963
No 5
>1k20_A Manganese-dependent inorganic pyrophosphatase; family II ppase, binuclear metal centre, hydrolas; 1.50A {Streptococcus gordonii} SCOP: c.107.1.1 PDB: 1wpp_A 2enx_A* 1i74_A
Probab=96.00 E-value=0.014 Score=50.30 Aligned_cols=112 Identities=14% Similarity=0.064 Sum_probs=63.1
Q ss_pred cEEEEccC-CCCcHHHHHHHHHhh-ccCCCceee-eCCccc-------C------CccccccccCCcceEEEEecCCChh
Q 040450 85 NLTLYNYP-SPSGSLSALFAHLFH-FHLNLPCLL-LPFSSV-------E------PLRVEDLCIEGLERVYLLDFLGPKG 148 (211)
Q Consensus 85 ~lVLYHyp-C~DGf~AAlAAhL~~-~~~~~p~~f-lP~s~~-------~------P~~veDlp~~~~~~VYILDFSfp~~ 148 (211)
.+|+=|.+ =+|..+||++...++ +..+..+.+ +|...- . |--++++.......|++||.+-+..
T Consensus 3 i~I~gH~~pD~DaigSalal~~~l~~~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~vilVD~~~~~r 82 (310)
T 1k20_A 3 ILVFGHQNPDSDAIGSSYAFAYLAREAYGLDTEAVALGEPNEETAFVLDYFGVAAPRVITSAKAEGAEQVILTDHNEFQQ 82 (310)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHHHHHCCCEEECBSSCCCHHHHHHHHHHTCCCCCBCSCTGGGTCSEEEEESCCCGGG
T ss_pred EEEEcCCCCChHHHHHHHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHcCCCchhhhhhhccccCceEEEEcCCCccc
Confidence 46777774 578899998887666 544333333 232110 0 0001121110114699999997754
Q ss_pred HHHHHhhhCCCcEEEeecchhhHhhhcCCCCCCeEEEEecCCCcchhhHHhhhh
Q 040450 149 FADALSRRSSCEVIGFDHRKSVLGQITSDHPDKVTFYVDLEKSSSTAAYEYFSS 202 (211)
Q Consensus 149 fl~~Ls~ka~~sVIvLDHHKSA~e~L~~~~~~nl~i~FDMeKSGA~lAwdYF~~ 202 (211)
....+ .++. .|++||||.+.- .... ......+|---|-++|.|++|..
T Consensus 83 ~~~~~-~~~~-~~~iIDHH~~~~--~~~~--~~~~~~i~p~gSt~tiv~~~~~~ 130 (310)
T 1k20_A 83 SVADI-AEVE-VYGVVDHHRVAN--FETA--NPLYMRLEPVGSASSIVYRMFKE 130 (310)
T ss_dssp SCTTG-GGSE-EEEEEECSCCCS--CCCS--SCCEEEECSSSCHHHHHHHHHHH
T ss_pred ccccc-cccC-EEEEECCCcCCC--cCCC--CCcEEEEEEccHHHHHHHHHHHH
Confidence 33233 4453 789999999741 2211 22344566555667899999875
No 6
>2haw_A Manganese-dependent inorganic pyrophosphatase; substrate complex, hydrolase; HET: 1PE PG4; 1.75A {Bacillus subtilis} SCOP: c.107.1.1 PDB: 1k23_A* 1wpm_A* 2iw4_A*
Probab=95.60 E-value=0.029 Score=48.13 Aligned_cols=112 Identities=11% Similarity=0.048 Sum_probs=61.7
Q ss_pred cEEEEcc-CCCCcHHHHHHHHHhhccCCCceee-eCCcccC-------C--ccc----cccccCCcceEEEEecCCChhH
Q 040450 85 NLTLYNY-PSPSGSLSALFAHLFHFHLNLPCLL-LPFSSVE-------P--LRV----EDLCIEGLERVYLLDFLGPKGF 149 (211)
Q Consensus 85 ~lVLYHy-pC~DGf~AAlAAhL~~~~~~~p~~f-lP~s~~~-------P--~~v----eDlp~~~~~~VYILDFSfp~~f 149 (211)
.+|+=|. |=+|..+||++...+.+..+..+.. +|...-. - +.. ++++ .+...|++||.+-+...
T Consensus 4 i~I~gH~~pD~DaigSalal~~~l~~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~-~~~~~vilVD~~~~~r~ 82 (309)
T 2haw_A 4 ILIFGHQNPDTDTICSAIAYADLKNKLGFNAEPVRLGQVNGETQYALDYFKQESPRLVETAA-NEVNGVILVDHNERQQS 82 (309)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEESSCCCHHHHHHHHHTTCCCCEECSCST-TTCSEEEEESCCCGGGS
T ss_pred EEEEcCCCCChHHHHHHHHHHHHHHHcCCCeEEEECCCCCHHHHHHHHHcCCCcHHhhhhcc-CCCCEEEEEeCCCcccc
Confidence 5677787 4578899999887776554443333 2322110 0 001 1111 12246999999977643
Q ss_pred HHHHhhhCCCcEEEeecchhhHhhhcCCCCCCeEEEEecCCCcchhhHHhhhhh
Q 040450 150 ADALSRRSSCEVIGFDHRKSVLGQITSDHPDKVTFYVDLEKSSSTAAYEYFSSK 203 (211)
Q Consensus 150 l~~Ls~ka~~sVIvLDHHKSA~e~L~~~~~~nl~i~FDMeKSGA~lAwdYF~~k 203 (211)
...+ .++. .|++||||.+.- . .....+..+..---|-++|.|++|.+.
T Consensus 83 ~~~~-~~~~-~~~iIDHH~~~~--~--~~~~~~~~~~~~~gSt~~lv~~~~~~~ 130 (309)
T 2haw_A 83 IKDI-EEVQ-VLEVIDHHRIAN--F--ETAEPLYYRAEPVGCTATILNKMYKEN 130 (309)
T ss_dssp CTTG-GGSE-EEEEEECSCCCS--C--CCSSCCEEEECCSSCHHHHHHHHHHHT
T ss_pred hhhh-hhcC-EEEEECCCcCCC--c--CCCCCcEEEEccccHHHHHHHHHHHHc
Confidence 3222 3453 688899998631 1 112333333333335567889998753
No 7
>2eb0_A Manganese-dependent inorganic pyrophosphatase; DHH domain, DHHA2 domain, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii}
Probab=94.41 E-value=0.056 Score=46.33 Aligned_cols=106 Identities=15% Similarity=0.078 Sum_probs=57.8
Q ss_pred EEEEccC-CCCcHHHHHHHHHhhccCCCceeeeCCcccC---------Ccccccc-ccCCcceEEEEecCCChhHHHHHh
Q 040450 86 LTLYNYP-SPSGSLSALFAHLFHFHLNLPCLLLPFSSVE---------PLRVEDL-CIEGLERVYLLDFLGPKGFADALS 154 (211)
Q Consensus 86 lVLYHyp-C~DGf~AAlAAhL~~~~~~~p~~flP~s~~~---------P~~veDl-p~~~~~~VYILDFSfp~~fl~~Ls 154 (211)
+|+=|.+ =+|..+||++...++ .. .-+++...-. .+..+++ .......|++||++-+......+
T Consensus 3 ~I~gH~~pD~DaigSalal~~~l--~~--~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~vilVD~~~~~r~~~~~- 77 (307)
T 2eb0_A 3 YVVGHKNPDTDSIASAIVLAYFL--DC--YPARLGDINPETEFVLRKFGVMEPELIESAKGKEIILVDHSEKSQSFDDL- 77 (307)
T ss_dssp EEECCSSCCHHHHHHHHHHHHHH--TS--EEEESSCCCHHHHHHHHHHTCCCCEECCCCTTCEEEEESCCCGGGSCTTG-
T ss_pred EEEeCCCCChHHHHHHHHHHHHh--CC--eEEEcCCCCHHHHHHHHHcCCCchhhhhhccCCeEEEEeCCCcccchhhc-
Confidence 5666764 478899998887665 22 2222321100 0001111 11234689999999876433222
Q ss_pred hhCCCcEEEeecchhhHhhhcCCCCCCeEEEEecCCCcchhhHHhhhh
Q 040450 155 RRSSCEVIGFDHRKSVLGQITSDHPDKVTFYVDLEKSSSTAAYEYFSS 202 (211)
Q Consensus 155 ~ka~~sVIvLDHHKSA~e~L~~~~~~nl~i~FDMeKSGA~lAwdYF~~ 202 (211)
.++. .|++||||... .+.. .++..+..---|-++|.|++|.+
T Consensus 78 ~~~~-~~~iIDHH~~~---~~~~--~~~~~~~~~~gSt~tlv~~~~~~ 119 (307)
T 2eb0_A 78 EEGK-LIAIIDHHKVG---LTTT--EPILYYAKPVGSTATVIAELYFK 119 (307)
T ss_dssp GGSE-EEEEEESSCCC---CCCS--SCCEEEECSSSCHHHHHHHHHHT
T ss_pred ccCC-EEEEEcCCCCc---cCCC--CCcEEEEeecchHHHHHHHHHHh
Confidence 3453 68889999985 2211 22333333333556788999874
No 8
>2qb7_A Exopolyphosphatase; A/B/A structure, DHH family phosphatase, hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2qb6_A 2qb8_A*
Probab=92.99 E-value=0.057 Score=48.19 Aligned_cols=59 Identities=19% Similarity=0.148 Sum_probs=38.8
Q ss_pred eEEEEecCCChhHHHHHhhhCCCcEEEeecchhhHhhhcCCCCCCeEEEEecCCCcchhhHHhhhhh
Q 040450 137 RVYLLDFLGPKGFADALSRRSSCEVIGFDHRKSVLGQITSDHPDKVTFYVDLEKSSSTAAYEYFSSK 203 (211)
Q Consensus 137 ~VYILDFSfp~~fl~~Ls~ka~~sVIvLDHHKSA~e~L~~~~~~nl~i~FDMeKSGA~lAwdYF~~k 203 (211)
.|++||..-+......+ .+ ..|++||||..--. +. ..+.. .+|---|-++|.|++|...
T Consensus 122 ~vilVD~~~~~r~~~~~--~~-~~~~iIDHH~~~~~-~~---~~~~~-~i~p~gSt~tlv~~~~~~~ 180 (397)
T 2qb7_A 122 NSYLVDNNDTPKNLKNY--ID-NVVGIIDHHFDLQK-HL---DAEPR-IVKVSGSCSSLVFNYWYEK 180 (397)
T ss_dssp EEEEESCSSCCGGGTTT--CC-EEEEEEECSCCCCC-CT---TCSSE-EECCCSCHHHHHHHHHHHH
T ss_pred eEEEecCCCcccCcccc--cc-cEEEEEcCCCCCCC-CC---CCCcc-EEeecccHHHHHHHHHHHh
Confidence 69999999887665445 45 37788999986321 11 11222 5565556678999998753
No 9
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=72.55 E-value=7.7 Score=27.69 Aligned_cols=50 Identities=16% Similarity=0.024 Sum_probs=30.3
Q ss_pred ccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCCcccCCccccccccCC
Q 040450 80 EERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPFSSVEPLRVEDLCIEG 134 (211)
Q Consensus 80 ~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~s~~~P~~veDlp~~~ 134 (211)
.++..++|+| |..|.-|+.|++.....+-.. ..+-. ...-+....+|...
T Consensus 53 ~~~~~~ivvy---C~~G~rs~~aa~~L~~~G~~~-~~l~G-G~~~W~~~g~p~~~ 102 (110)
T 2k0z_A 53 QHKDKKVLLH---CRAGRRALDAAKSMHELGYTP-YYLEG-NVYDFEKYGFRMVY 102 (110)
T ss_dssp SCSSSCEEEE---CSSSHHHHHHHHHHHHTTCCC-EEEES-CGGGTTTTTCCCBC
T ss_pred cCCCCEEEEE---eCCCchHHHHHHHHHHCCCCE-EEecC-CHHHHHHCCCcEec
Confidence 3445679999 899999999998776655333 33322 22234444455443
No 10
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=69.44 E-value=8.6 Score=31.21 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=31.9
Q ss_pred ccchhHHHHH-HHhcccCCccEEEEccCCCCcH-HHHHHHHHhhccCCCceeeeC
Q 040450 66 FRSDAALEAI-SKAGEERVKNLTLYNYPSPSGS-LSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 66 ~rs~aaleai-~~~~~~~~p~lVLYHypC~DGf-~AAlAAhL~~~~~~~p~~flP 118 (211)
+-+.+.++.. .....+...++|+| |..|. .|+.++|.....+-..+.++-
T Consensus 63 ~~~~~~~~~~~~~~gi~~~~~vvvy---c~~g~~~s~~a~~~L~~~G~~~v~~L~ 114 (271)
T 1e0c_A 63 QPPREQLESLFGELGHRPEAVYVVY---DDEGGGWAGRFIWLLDVIGQQRYHYLN 114 (271)
T ss_dssp CCCHHHHHHHHHHHTCCTTCEEEEE---CSSSSHHHHHHHHHHHHTTCCCEEEET
T ss_pred CCCHHHHHHHHHHcCCCCCCeEEEE---cCCCCccHHHHHHHHHHcCCCCeEEec
Confidence 4455566554 44334556789999 88887 777888776655544566554
No 11
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=67.92 E-value=11 Score=30.57 Aligned_cols=52 Identities=19% Similarity=0.130 Sum_probs=33.4
Q ss_pred cccchhHHHHH-HHhcccCCccEEEEccCCCCcHHHHHHHHHhhc-cCCCceeeeCC
Q 040450 65 GFRSDAALEAI-SKAGEERVKNLTLYNYPSPSGSLSALFAHLFHF-HLNLPCLLLPF 119 (211)
Q Consensus 65 ~~rs~aaleai-~~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~-~~~~p~~flP~ 119 (211)
.|++.+.|++. +....+...++|+| |..|.-|+.+++.... .+-..+..+..
T Consensus 207 ~~~~~~~l~~~~~~~~~~~~~~iv~y---C~~G~rs~~a~~~L~~~~G~~~v~~l~G 260 (277)
T 3aay_A 207 TFKSDEELAKLYADAGLDNSKETIAY---CRIGERSSHTWFVLRELLGHQNVKNYDG 260 (277)
T ss_dssp CBCCHHHHHHHHHHHTCCTTSCEEEE---CSSHHHHHHHHHHHHTTSCCSCEEEESS
T ss_pred cCCCHHHHHHHHHHcCCCCCCCEEEE---cCcHHHHHHHHHHHHHHcCCCcceeeCc
Confidence 47777777765 33334455678999 9999999988876543 33223555543
No 12
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=61.99 E-value=16 Score=24.58 Aligned_cols=40 Identities=13% Similarity=0.066 Sum_probs=26.4
Q ss_pred HHHhcccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeee
Q 040450 75 ISKAGEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLL 117 (211)
Q Consensus 75 i~~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~fl 117 (211)
+.+...+...++++| |..|.-|+.+++.....+-..+..+
T Consensus 33 ~~~l~~~~~~~ivv~---C~~g~rs~~aa~~L~~~G~~~v~~l 72 (85)
T 2jtq_A 33 IATAVPDKNDTVKVY---CNAGRQSGQAKEILSEMGYTHVENA 72 (85)
T ss_dssp HHHHCCCTTSEEEEE---ESSSHHHHHHHHHHHHTTCSSEEEE
T ss_pred HHHhCCCCCCcEEEE---cCCCchHHHHHHHHHHcCCCCEEec
Confidence 344433445679999 8889999999887666544344444
No 13
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=61.68 E-value=15 Score=30.01 Aligned_cols=52 Identities=15% Similarity=0.085 Sum_probs=33.7
Q ss_pred cccchhHHHHHH-HhcccCCccEEEEccCCCCcHHHHHHHHHhh-ccCCCceeeeCC
Q 040450 65 GFRSDAALEAIS-KAGEERVKNLTLYNYPSPSGSLSALFAHLFH-FHLNLPCLLLPF 119 (211)
Q Consensus 65 ~~rs~aaleai~-~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~-~~~~~p~~flP~ 119 (211)
.|++.+.|++.- ....+...++|+| |-.|.-|+.+++... ..+-..+..+..
T Consensus 214 ~~~~~~~l~~~~~~~g~~~~~~ivvy---C~~G~rs~~a~~~L~~~~G~~~v~~l~G 267 (285)
T 1uar_A 214 TFKSAEELRALYEPLGITKDKDIVVY---CRIAERSSHSWFVLKYLLGYPHVKNYDG 267 (285)
T ss_dssp CBCCHHHHHHHHGGGTCCTTSEEEEE---CSSHHHHHHHHHHHHTTSCCSCEEEESS
T ss_pred cCCCHHHHHHHHHHcCCCCCCCEEEE---CCchHHHHHHHHHHHHHcCCCCcceeCc
Confidence 477777776543 3224455678998 899999998888765 444334555543
No 14
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=59.56 E-value=12 Score=26.45 Aligned_cols=33 Identities=9% Similarity=0.079 Sum_probs=23.0
Q ss_pred CCccEEEEccCCCCcHHHHHHHHHhhccCCCceeee
Q 040450 82 RVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLL 117 (211)
Q Consensus 82 ~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~fl 117 (211)
+..++|+| |..|.-|+.|++.....+-..+..+
T Consensus 51 ~~~~ivvy---c~~g~rs~~a~~~L~~~G~~~v~~l 83 (106)
T 3hix_A 51 KSRDIYVY---GAGDEQTSQAVNLLRSAGFEHVSEL 83 (106)
T ss_dssp TTSCEEEE---CSSHHHHHHHHHHHHHTTCSCEEEC
T ss_pred CCCeEEEE---ECCCChHHHHHHHHHHcCCcCEEEe
Confidence 34578999 9999999999987665543334433
No 15
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=54.68 E-value=16 Score=31.11 Aligned_cols=66 Identities=15% Similarity=-0.034 Sum_probs=39.9
Q ss_pred cccchhHHHHHHHhcccCCccEEEEccCCCCcHHHHHHHHHhhc-cCCCceeeeCCcccCCcc-ccccccCCc
Q 040450 65 GFRSDAALEAISKAGEERVKNLTLYNYPSPSGSLSALFAHLFHF-HLNLPCLLLPFSSVEPLR-VEDLCIEGL 135 (211)
Q Consensus 65 ~~rs~aaleai~~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~-~~~~p~~flP~s~~~P~~-veDlp~~~~ 135 (211)
.|++.+.|+++- ...+...++++| |..|.-|+.++..... .+-..+..+..+. .-+. ..++|.+.+
T Consensus 242 ~~~~~~~l~~~~-~~l~~~~~ivvy---C~sG~rs~~a~~~L~~~~G~~~v~~~~GG~-~~W~~~~g~Pv~~g 309 (318)
T 3hzu_A 242 RFRSREELERLY-DFINPDDQTVVY---CRIGERSSHTWFVLTHLLGKADVRNYDGSW-TEWGNAVRVPIVAG 309 (318)
T ss_dssp CBCCHHHHHHHT-TTCCTTCCCEEE---CSSSHHHHHHHHHHHHTSCCSSCEECTTHH-HHHTTSTTCCCBCS
T ss_pred cCCCHHHHHHHh-cCCCCCCcEEEE---cCChHHHHHHHHHHHHHcCCCCeeEeCCcH-HHHhcCCCCCcccC
Confidence 578877777765 233444578888 9999999998875543 3333466655432 2333 235665443
No 16
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=54.37 E-value=15 Score=26.67 Aligned_cols=35 Identities=23% Similarity=0.159 Sum_probs=24.5
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeC
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP 118 (211)
+...++|+| |..|.-|+.|++.....+-..+..+-
T Consensus 84 ~~~~~ivvy---C~~G~rs~~a~~~L~~~G~~~v~~l~ 118 (139)
T 2hhg_A 84 QEDKKFVFY---CAGGLRSALAAKTAQDMGLKPVAHIE 118 (139)
T ss_dssp GSSSEEEEE---CSSSHHHHHHHHHHHHHTCCSEEEET
T ss_pred CCCCeEEEE---CCCChHHHHHHHHHHHcCCCCeEEec
Confidence 345678999 99999999998876665433354443
No 17
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=54.08 E-value=24 Score=31.05 Aligned_cols=53 Identities=21% Similarity=0.118 Sum_probs=37.0
Q ss_pred ccccchhHHHHHHH-hcccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCC
Q 040450 64 RGFRSDAALEAISK-AGEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPF 119 (211)
Q Consensus 64 r~~rs~aaleai~~-~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~ 119 (211)
..|++.+.|+++-. ...+...++|+| |-+|..|+.+++.....+-..+..+..
T Consensus 183 ~~~~~~~~l~~~~~~~gi~~~~~ivvy---C~~G~~a~~~~~~L~~~G~~~v~~l~G 236 (423)
T 2wlr_A 183 WNKVSDEQLKAMLAKHGIRHDTTVILY---GRDVYAAARVAQIMLYAGVKDVRLLDG 236 (423)
T ss_dssp TEECCHHHHHHHHHHTTCCTTSEEEEE---CSSHHHHHHHHHHHHHHTCSCEEEETT
T ss_pred CCCCCHHHHHHHHHHcCCCCCCeEEEE---CCCchHHHHHHHHHHHcCCCCeEEECC
Confidence 35778877776643 334455689999 889999998888766655445666654
No 18
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=53.35 E-value=9.9 Score=28.71 Aligned_cols=35 Identities=11% Similarity=0.103 Sum_probs=26.0
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeC
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP 118 (211)
++..++++| |.+|..|+.|++.....+-..+..+.
T Consensus 54 ~~~~~ivvy---C~~g~rs~~aa~~L~~~G~~~v~~l~ 88 (141)
T 3ilm_A 54 EKSRDIYVY---GAGDEQTSQAVNLLRSAGFEHVSELK 88 (141)
T ss_dssp CTTSEEEEE---CSSHHHHHHHHHHHHHTTCCSEEECT
T ss_pred CCCCeEEEE---ECCChHHHHHHHHHHHcCCCCEEEec
Confidence 344578999 99999999999987666554566654
No 19
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=52.58 E-value=17 Score=30.61 Aligned_cols=41 Identities=15% Similarity=-0.015 Sum_probs=29.5
Q ss_pred cccchhHHHHHHHh-cccCCccEEEEccCCCCcHHHHHHHHHhhc
Q 040450 65 GFRSDAALEAISKA-GEERVKNLTLYNYPSPSGSLSALFAHLFHF 108 (211)
Q Consensus 65 ~~rs~aaleai~~~-~~~~~p~lVLYHypC~DGf~AAlAAhL~~~ 108 (211)
.|++.+.|+++-.. ..+...++++| |..|.-|+.++.....
T Consensus 235 ~~~~~~~l~~~~~~~~~~~~~~iv~y---C~sG~rs~~a~~~L~~ 276 (302)
T 3olh_A 235 LEKSPEEIRHLFQEKKVDLSKPLVAT---CGSGVTACHVALGAYL 276 (302)
T ss_dssp CBCCHHHHHHHHHHTTCCTTSCEEEE---CSSSSTTHHHHHHHHT
T ss_pred ccCCHHHHHHHHHhcCCCCCCCEEEE---CCChHHHHHHHHHHHH
Confidence 57888888877443 34445678888 9999999888765443
No 20
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=49.80 E-value=20 Score=29.04 Aligned_cols=51 Identities=10% Similarity=-0.102 Sum_probs=31.6
Q ss_pred ccchhHHHHH-HHhcccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCC
Q 040450 66 FRSDAALEAI-SKAGEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPF 119 (211)
Q Consensus 66 ~rs~aaleai-~~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~ 119 (211)
+++++.++++ +....+...++++| |..|.-|+.+++.....+-..+..+..
T Consensus 205 ~~~~~~l~~~~~~~~~~~~~~ivvy---C~~G~rs~~a~~~L~~~G~~~v~~l~G 256 (271)
T 1e0c_A 205 LRIRTDIAGRLEELGITPDKEIVTH---CQTHHRSGLTYLIAKALGYPRVKGYAG 256 (271)
T ss_dssp TEECTTHHHHHHHTTCCTTSEEEEE---CSSSSHHHHHHHHHHHTTCSCEEECSS
T ss_pred CCCHHHHHHHHHHcCCCCCCCEEEE---CCchHHHHHHHHHHHHcCCCCceeeCC
Confidence 4444556554 33344555689999 888988888887665544334555543
No 21
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=48.69 E-value=33 Score=27.92 Aligned_cols=52 Identities=17% Similarity=0.047 Sum_probs=33.0
Q ss_pred cccchhHHHHHHHh-cccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCC
Q 040450 65 GFRSDAALEAISKA-GEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPF 119 (211)
Q Consensus 65 ~~rs~aaleai~~~-~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~ 119 (211)
.|++.+.|+++-.. ..+...++++| |..|.-|+.++......+-..+..+..
T Consensus 211 ~~~~~~~l~~~~~~~~~~~~~~ivv~---C~~G~rs~~a~~~L~~~G~~~v~~~~G 263 (280)
T 1urh_A 211 ELKTTDELDAIFFGRGVSYDKPIIVS---CGSGVTAAVVLLALATLDVPNVKLYDG 263 (280)
T ss_dssp SBCCHHHHHHHHHTTTCCSSSCEEEE---CCSSSTHHHHHHHHHHTTCSSCEEECC
T ss_pred ccCCHHHHHHHHHHcCCCCCCCEEEE---CChHHHHHHHHHHHHHcCCCCceeeCC
Confidence 47777788765333 33445678888 778888888776655544334555554
No 22
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=48.04 E-value=24 Score=26.29 Aligned_cols=36 Identities=14% Similarity=-0.037 Sum_probs=24.1
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCC
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPF 119 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~ 119 (211)
+...++++| |..|.-|+.|++.....+-..+..+-.
T Consensus 78 ~~~~~ivvy---C~~G~rS~~aa~~L~~~G~~~v~~l~G 113 (148)
T 2fsx_A 78 QHERPVIFL---CRSGNRSIGAAEVATEAGITPAYNVLD 113 (148)
T ss_dssp ---CCEEEE---CSSSSTHHHHHHHHHHTTCCSEEEETT
T ss_pred CCCCEEEEE---cCCChhHHHHHHHHHHcCCcceEEEcC
Confidence 344578999 899988888888766655445666644
No 23
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=47.64 E-value=26 Score=24.23 Aligned_cols=26 Identities=12% Similarity=0.077 Sum_probs=20.4
Q ss_pred CCccEEEEccCCCCcHHHHHHHHHhhccC
Q 040450 82 RVKNLTLYNYPSPSGSLSALFAHLFHFHL 110 (211)
Q Consensus 82 ~~p~lVLYHypC~DGf~AAlAAhL~~~~~ 110 (211)
+..++++| |..|.-|+.|++.....+
T Consensus 55 ~~~~ivvy---C~~g~rs~~a~~~L~~~G 80 (100)
T 3foj_A 55 DNETYYII---CKAGGRSAQVVQYLEQNG 80 (100)
T ss_dssp TTSEEEEE---CSSSHHHHHHHHHHHTTT
T ss_pred CCCcEEEE---cCCCchHHHHHHHHHHCC
Confidence 34578999 999999999998765543
No 24
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=47.54 E-value=22 Score=24.97 Aligned_cols=34 Identities=9% Similarity=-0.122 Sum_probs=23.4
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeee
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLL 117 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~fl 117 (211)
++..++++| |..|.-|+.+++.....+-..+..+
T Consensus 56 ~~~~~ivvy---c~~g~rs~~a~~~L~~~G~~~v~~l 89 (108)
T 1gmx_A 56 DFDTPVMVM---CYHGNSSKGAAQYLLQQGYDVVYSI 89 (108)
T ss_dssp CTTSCEEEE---CSSSSHHHHHHHHHHHHTCSSEEEE
T ss_pred CCCCCEEEE---cCCCchHHHHHHHHHHcCCceEEEe
Confidence 344578999 8889999998887666543334443
No 25
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=43.96 E-value=34 Score=24.23 Aligned_cols=33 Identities=18% Similarity=0.080 Sum_probs=23.6
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeee
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLL 117 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~fl 117 (211)
++..++++| |..|.-|+.|++.....+- .+..+
T Consensus 53 ~~~~~ivvy---C~~G~rs~~aa~~L~~~G~-~v~~l 85 (108)
T 3gk5_A 53 ERDKKYAVI---CAHGNRSAAAVEFLSQLGL-NIVDV 85 (108)
T ss_dssp CTTSCEEEE---CSSSHHHHHHHHHHHTTTC-CEEEE
T ss_pred CCCCeEEEE---cCCCcHHHHHHHHHHHcCC-CEEEE
Confidence 344578999 8999999999987665543 44444
No 26
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=43.75 E-value=26 Score=24.79 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=18.8
Q ss_pred ccEEEEccCC-CCcHHHHHHHHHhhccC
Q 040450 84 KNLTLYNYPS-PSGSLSALFAHLFHFHL 110 (211)
Q Consensus 84 p~lVLYHypC-~DGf~AAlAAhL~~~~~ 110 (211)
.++++| | ..|.-|+.+++.....+
T Consensus 90 ~~ivvy---C~~~G~rs~~a~~~L~~~G 114 (134)
T 3g5j_A 90 DNIVIY---CARGGMRSGSIVNLLSSLG 114 (134)
T ss_dssp SEEEEE---CSSSSHHHHHHHHHHHHTT
T ss_pred CeEEEE---ECCCChHHHHHHHHHHHcC
Confidence 678999 8 58999999988765543
No 27
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=41.84 E-value=40 Score=27.38 Aligned_cols=51 Identities=10% Similarity=0.056 Sum_probs=32.2
Q ss_pred cccchhHHHHHH-HhcccCCccEEEEccCCCCcHH-HHHHHHHhhccCCCceeeeC
Q 040450 65 GFRSDAALEAIS-KAGEERVKNLTLYNYPSPSGSL-SALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 65 ~~rs~aaleai~-~~~~~~~p~lVLYHypC~DGf~-AAlAAhL~~~~~~~p~~flP 118 (211)
.+.+.+.++..- ....+...++|+| |..|.. |+.++|.....+-..+.++-
T Consensus 67 ~~~~~~~~~~~~~~~gi~~~~~ivvy---c~~g~~~a~~a~~~L~~~G~~~v~~l~ 119 (280)
T 1urh_A 67 MLPRPETFAVAMRELGVNQDKHLIVY---DEGNLFSAPRAWWMLRTFGVEKVSILG 119 (280)
T ss_dssp CCCCHHHHHHHHHHTTCCTTSEEEEE---CSSSCSSHHHHHHHHHHTTCSCEEEET
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEE---CCCCCccHHHHHHHHHHcCCCCEEEec
Confidence 444556665553 3334556789999 777876 77777766655544566654
No 28
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=41.40 E-value=34 Score=23.38 Aligned_cols=24 Identities=25% Similarity=0.192 Sum_probs=19.5
Q ss_pred ccEEEEccCCCCcHHHHHHHHHhhccC
Q 040450 84 KNLTLYNYPSPSGSLSALFAHLFHFHL 110 (211)
Q Consensus 84 p~lVLYHypC~DGf~AAlAAhL~~~~~ 110 (211)
.++++| |..|.-|+.+++.....+
T Consensus 54 ~~ivvy---C~~g~rs~~a~~~L~~~G 77 (94)
T 1wv9_A 54 RPLLLV---CEKGLLSQVAALYLEAEG 77 (94)
T ss_dssp SCEEEE---CSSSHHHHHHHHHHHHHT
T ss_pred CCEEEE---cCCCChHHHHHHHHHHcC
Confidence 678999 999999999988766544
No 29
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=40.26 E-value=34 Score=23.69 Aligned_cols=33 Identities=9% Similarity=0.002 Sum_probs=23.2
Q ss_pred CCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeC
Q 040450 82 RVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 82 ~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP 118 (211)
+..++++| |..|.-|+.|++.....+- .+..+.
T Consensus 55 ~~~~iv~y---C~~g~rs~~a~~~L~~~G~-~v~~l~ 87 (103)
T 3eme_A 55 KNEIYYIV---CAGGVRSAKVVEYLEANGI-DAVNVE 87 (103)
T ss_dssp TTSEEEEE---CSSSSHHHHHHHHHHTTTC-EEEEET
T ss_pred CCCeEEEE---CCCChHHHHHHHHHHHCCC-CeEEeC
Confidence 34578999 8999999998887665443 444443
No 30
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=39.58 E-value=44 Score=28.34 Aligned_cols=50 Identities=14% Similarity=0.268 Sum_probs=31.7
Q ss_pred ccchhHHHHH-HHhcccCCccEEEEccCCCCcH-HHHHHHHHhhccCCCceeeeC
Q 040450 66 FRSDAALEAI-SKAGEERVKNLTLYNYPSPSGS-LSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 66 ~rs~aaleai-~~~~~~~~p~lVLYHypC~DGf-~AAlAAhL~~~~~~~p~~flP 118 (211)
+-+.+.++.. .....++..++|+| |..|. .|+.++|+....+-..+.+|-
T Consensus 93 ~~~~~~~~~~l~~lgi~~~~~vVvy---c~~g~~~a~~a~~~L~~~G~~~V~~L~ 144 (318)
T 3hzu_A 93 YINGEQFAELMDRKGIARDDTVVIY---GDKSNWWAAYALWVFTLFGHADVRLLN 144 (318)
T ss_dssp BCCHHHHHHHHHHTTCCTTCEEEEE---CSGGGHHHHHHHHHHHHTTCSCEEEET
T ss_pred CCCHHHHHHHHHHcCCCCCCeEEEE---CCCCCccHHHHHHHHHHcCCCceEEcc
Confidence 3344444443 44345556789999 88887 788888876665554566654
No 31
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=37.43 E-value=96 Score=22.46 Aligned_cols=43 Identities=16% Similarity=0.066 Sum_probs=26.3
Q ss_pred cccchhHHHHHHHh-cccCCccEEEEccCCCCcHHHHHHHHHhhccC
Q 040450 65 GFRSDAALEAISKA-GEERVKNLTLYNYPSPSGSLSALFAHLFHFHL 110 (211)
Q Consensus 65 ~~rs~aaleai~~~-~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~ 110 (211)
.+.+...++.+-.. ..+...++++| |..|.-|+.+++.....+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~ivvy---C~~G~rs~~aa~~L~~~G 115 (139)
T 3d1p_A 72 FALDPLEFEKQIGIPKPDSAKELIFY---CASGKRGGEAQKVASSHG 115 (139)
T ss_dssp GGSCHHHHHHHHSSCCCCTTSEEEEE---CSSSHHHHHHHHHHHTTT
T ss_pred ccCCHHHHHHHHhccCCCCCCeEEEE---CCCCchHHHHHHHHHHcC
Confidence 34444455444222 22344578888 888999988887665543
No 32
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=37.22 E-value=27 Score=24.60 Aligned_cols=23 Identities=9% Similarity=0.001 Sum_probs=18.3
Q ss_pred ccEEEEccCCCCcHHHHHHHHHhhcc
Q 040450 84 KNLTLYNYPSPSGSLSALFAHLFHFH 109 (211)
Q Consensus 84 p~lVLYHypC~DGf~AAlAAhL~~~~ 109 (211)
.++++| |..|.-|+.+++.....
T Consensus 73 ~~ivv~---C~~G~rs~~a~~~L~~~ 95 (127)
T 3i2v_A 73 VPIYVI---CKLGNDSQKAVKILQSL 95 (127)
T ss_dssp EEEEEE---CSSSSHHHHHHHHHHHH
T ss_pred CeEEEE---cCCCCcHHHHHHHHHHh
Confidence 378899 99999999888765554
No 33
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=36.94 E-value=35 Score=24.82 Aligned_cols=41 Identities=17% Similarity=0.045 Sum_probs=25.1
Q ss_pred ccchhHHHHHHHhcccCCccEEEEccCCCCcHHHHHHHHHhhccC
Q 040450 66 FRSDAALEAISKAGEERVKNLTLYNYPSPSGSLSALFAHLFHFHL 110 (211)
Q Consensus 66 ~rs~aaleai~~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~ 110 (211)
+++..-++.+... .++..++++| |..|.-|+.+++.....+
T Consensus 66 ~~~~~~~~~~~~~-l~~~~~ivvy---C~~G~rs~~aa~~L~~~G 106 (129)
T 1tq1_A 66 SKNTDFLEQVSSH-FGQSDNIIVG---CQSGGRSIKATTDLLHAG 106 (129)
T ss_dssp CCTTTHHHHHTTT-CCTTSSEEEE---ESSCSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHhh-CCCCCeEEEE---CCCCcHHHHHHHHHHHcC
Confidence 3344444544322 2344578999 888998888887655543
No 34
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=35.92 E-value=1.3e+02 Score=26.57 Aligned_cols=32 Identities=3% Similarity=-0.158 Sum_probs=18.9
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccCCCceee
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLL 116 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~f 116 (211)
+...++|+| |.+|. ++-++|.....+-..+..
T Consensus 324 ~~~~~vvvy---~~~~~-~~~~~~~L~~~G~~~v~~ 355 (474)
T 3tp9_A 324 PADRPIHLL---AADAI-APDVIRALRSIGIDDVVD 355 (474)
T ss_dssp CSSSCEEEE---CCTTT-HHHHHHHHHHTTCCCEEE
T ss_pred CCCCeEEEE---ECCCc-HHHHHHHHHHcCCcceEE
Confidence 345578999 55665 555666655555444444
No 35
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=35.27 E-value=52 Score=26.71 Aligned_cols=51 Identities=16% Similarity=0.286 Sum_probs=31.8
Q ss_pred cccchhHHHHH-HHhcccCCccEEEEccCCCCcH-HHHHHHHHhhccCCCceeeeC
Q 040450 65 GFRSDAALEAI-SKAGEERVKNLTLYNYPSPSGS-LSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 65 ~~rs~aaleai-~~~~~~~~p~lVLYHypC~DGf-~AAlAAhL~~~~~~~p~~flP 118 (211)
.+.+.+.++.. .....+...++|+| |..|. .|+.++|.....+-..+.++.
T Consensus 60 ~~~~~~~~~~~~~~~gi~~~~~ivvy---c~~g~~~s~~a~~~L~~~G~~~v~~l~ 112 (285)
T 1uar_A 60 DFISEEEFAKLMERLGISNDTTVVLY---GDKNNWWAAYAFWFFKYNGHKDVRLMN 112 (285)
T ss_dssp SBCCHHHHHHHHHHTTCCTTCEEEEE---CHHHHHHHHHHHHHHHHTTCSCEEEET
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEE---CCCCCccHHHHHHHHHHcCCCCeEEec
Confidence 34455555554 33334555689999 88887 688888866655544566654
No 36
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=35.18 E-value=1.3e+02 Score=23.84 Aligned_cols=77 Identities=17% Similarity=0.192 Sum_probs=46.4
Q ss_pred cHHHHHHHHHhhccCCCceeeeCCcccCCccccccc-cCCcceEEEEecCCChhHHHHHhhhC-----CCcEEEe-ecch
Q 040450 96 GSLSALFAHLFHFHLNLPCLLLPFSSVEPLRVEDLC-IEGLERVYLLDFLGPKGFADALSRRS-----SCEVIGF-DHRK 168 (211)
Q Consensus 96 Gf~AAlAAhL~~~~~~~p~~flP~s~~~P~~veDlp-~~~~~~VYILDFSfp~~fl~~Ls~ka-----~~sVIvL-DHHK 168 (211)
+..|-+++++ +.+.+.++.+++..... ..+++ ...+.-|+++.+||....+.++.+.+ ...||.| +...
T Consensus 71 ~~~A~~~~~~-l~~lg~~~~~~~~~~~~---~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~ 146 (220)
T 3etn_A 71 GQIAMNIATT-FCSTGIPSVFLHPSEAQ---HGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPD 146 (220)
T ss_dssp HHHHHHHHHH-HHHTTCCEEECCTTGGG---BTGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTT
T ss_pred HHHHHHHHHH-HHhcCCcEEEeCCHHHH---HhhhccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCC
Confidence 4444444444 44566788877654321 12222 34567888999999876665433322 2356666 6788
Q ss_pred hhHhhhcC
Q 040450 169 SVLGQITS 176 (211)
Q Consensus 169 SA~e~L~~ 176 (211)
|.+.++++
T Consensus 147 s~La~~aD 154 (220)
T 3etn_A 147 SPLASESD 154 (220)
T ss_dssp SHHHHHSS
T ss_pred ChhHHhCC
Confidence 99998886
No 37
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=34.06 E-value=45 Score=27.53 Aligned_cols=48 Identities=17% Similarity=0.273 Sum_probs=28.1
Q ss_pred chhHHHH-HHHhcccCCccEEEEccCCCC--cHH-HHHHHHHhhccCCCceeeeC
Q 040450 68 SDAALEA-ISKAGEERVKNLTLYNYPSPS--GSL-SALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 68 s~aalea-i~~~~~~~~p~lVLYHypC~D--Gf~-AAlAAhL~~~~~~~p~~flP 118 (211)
+.+.+++ +.....++..++|+| |.. |.. |+.++|+....+-..+.+|-
T Consensus 76 ~~~~~~~~l~~lgi~~~~~vVvy---c~~~~g~~~a~~a~~~L~~~G~~~V~~L~ 127 (296)
T 1rhs_A 76 SEAGFADYVGSLGISNDTHVVVY---DGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127 (296)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEE---CCCSSSCSSHHHHHHHHHHTTCCCEEEET
T ss_pred CHHHHHHHHHHcCCCCCCeEEEE---cCCCCCcchHHHHHHHHHHcCCCcEEEcC
Confidence 3344443 333344555689999 665 554 77788776655544566653
No 38
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=34.06 E-value=1.3e+02 Score=22.58 Aligned_cols=80 Identities=13% Similarity=0.059 Sum_probs=45.6
Q ss_pred CCcHHHHHHHHHhhccCCCceeeeCCcccCCcccccc-ccCCcceEEEEecCCChhHHHH---HhhhCCCcEEEe-ecch
Q 040450 94 PSGSLSALFAHLFHFHLNLPCLLLPFSSVEPLRVEDL-CIEGLERVYLLDFLGPKGFADA---LSRRSSCEVIGF-DHRK 168 (211)
Q Consensus 94 ~DGf~AAlAAhL~~~~~~~p~~flP~s~~~P~~veDl-p~~~~~~VYILDFSfp~~fl~~---Ls~ka~~sVIvL-DHHK 168 (211)
.++..|-++++.+ .+.+.++.+++..... +. +.+ ...++.-|+++.+||-...+.+ .+++....||+| |...
T Consensus 49 ~S~~~a~~~~~~l-~~~g~~~~~~~~~~~~-~~-~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 125 (187)
T 3sho_A 49 FSAAVAVFLGHGL-NSLGIRTTVLTEGGST-LT-ITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSV 125 (187)
T ss_dssp GGHHHHHHHHHHH-HHTTCCEEEECCCTHH-HH-HHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred chHHHHHHHHHHH-HhcCCCEEEecCCchh-HH-HHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3555555555544 4567788887722111 00 111 1344567788888886655543 333323456555 6788
Q ss_pred hhHhhhcC
Q 040450 169 SVLGQITS 176 (211)
Q Consensus 169 SA~e~L~~ 176 (211)
|.+.++++
T Consensus 126 s~l~~~ad 133 (187)
T 3sho_A 126 SPPARIAD 133 (187)
T ss_dssp SHHHHHCS
T ss_pred CcchhhCc
Confidence 99998887
No 39
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=33.87 E-value=1.6e+02 Score=23.23 Aligned_cols=89 Identities=12% Similarity=0.103 Sum_probs=50.6
Q ss_pred EEEccCCCCcHHHHHHHHHhhc-----cCCCceeeeC-Cccc----------CCccccccc--cCCcceEEEEecCCChh
Q 040450 87 TLYNYPSPSGSLSALFAHLFHF-----HLNLPCLLLP-FSSV----------EPLRVEDLC--IEGLERVYLLDFLGPKG 148 (211)
Q Consensus 87 VLYHypC~DGf~AAlAAhL~~~-----~~~~p~~flP-~s~~----------~P~~veDlp--~~~~~~VYILDFSfp~~ 148 (211)
+++-+.=.+|..|-.+++.+.. +.+.|+..+. ..+. .-.-.+.+. ...+.-|+++-+||...
T Consensus 49 I~i~G~G~S~~~A~~~~~~l~~~~~~~r~g~~~~~~~~d~~~~~a~~~d~~~~~~~~~~l~~~~~~~Dvvi~iS~SG~t~ 128 (201)
T 3trj_A 49 VLVCGNGSSGVIAQHFTSKLLNHFEMERPPLPAIALTGDVATITAVGNHYGFSQIFAKQVAALGNEDDILLVITTSGDSE 128 (201)
T ss_dssp EEEEESTHHHHHHHHHHHHHHC-------CCCEEETTSCHHHHHHHHHHTCGGGTTHHHHHHHCCTTCEEEEECSSSCCH
T ss_pred EEEEeCcHhHHHHHHHHHHhcCccCCCCCCCceEEccCChHHHHHhccCCCHHHHHHHHHHhhCCCCCEEEEEeCCCCCH
Confidence 4444555567777777776654 4566777665 2210 000001111 34567788899999876
Q ss_pred HHHHH---hhhCCCcEEEe-ecchhhHhhhc
Q 040450 149 FADAL---SRRSSCEVIGF-DHRKSVLGQIT 175 (211)
Q Consensus 149 fl~~L---s~ka~~sVIvL-DHHKSA~e~L~ 175 (211)
.+.++ +++....||.| +...|.+.+++
T Consensus 129 ~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a 159 (201)
T 3trj_A 129 NILSAVEEAHDLEMKVIALTGGSGGALQNMY 159 (201)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTCCGGGGTC
T ss_pred HHHHHHHHHHHCCCcEEEEECCCCCHHHHhh
Confidence 65433 33333467766 77888888877
No 40
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=32.96 E-value=45 Score=29.22 Aligned_cols=54 Identities=17% Similarity=0.125 Sum_probs=38.9
Q ss_pred ccccccchhHHHHH-HHhcccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeee
Q 040450 62 RGRGFRSDAALEAI-SKAGEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLL 117 (211)
Q Consensus 62 ~~r~~rs~aaleai-~~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~fl 117 (211)
.+.-+=+.+.+++. .+...+...++|+|=. ..|++||-+.|++..-+...+.+|
T Consensus 91 ~ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~--~~~~~AaR~wW~Lr~~Gh~~V~vL 145 (327)
T 3utn_X 91 YPHMFPTKKVFDDAMSNLGVQKDDILVVYDR--VGNFSSPRCAWTLGVMGHPKVYLL 145 (327)
T ss_dssp STTCCCCHHHHHHHHHHTTCCTTCEEEEECS--SSSSSHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCcCHHHHHHHHHHcCCCCCCEEEEEeC--CCCcHHHHHHHHHHHcCCCceeec
Confidence 34455566666554 6667777789999943 457889999998777776678887
No 41
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=32.39 E-value=73 Score=25.71 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=31.0
Q ss_pred cccchhHHHHH-HHhcccCCccEEEEccCCCCcH-HHHHHHHHhhccCCCceeeeC
Q 040450 65 GFRSDAALEAI-SKAGEERVKNLTLYNYPSPSGS-LSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 65 ~~rs~aaleai-~~~~~~~~p~lVLYHypC~DGf-~AAlAAhL~~~~~~~p~~flP 118 (211)
.+.+.+.++.. .....+...++|+| |..|. .|+.++|+....+-..+.++-
T Consensus 58 ~~~~~~~~~~~~~~~gi~~~~~vvvy---c~~g~~~s~~a~~~L~~~G~~~v~~l~ 110 (277)
T 3aay_A 58 DFVDAQQFSKLLSERGIANEDTVILY---GGNNNWFAAYAYWYFKLYGHEKVKLLD 110 (277)
T ss_dssp SBCCHHHHHHHHHHHTCCTTSEEEEE---CSGGGHHHHHHHHHHHHTTCCSEEEET
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEE---CCCCCchHHHHHHHHHHcCCCcEEEec
Confidence 34455555543 33334555679999 87764 577888876655544566553
No 42
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=31.20 E-value=83 Score=22.94 Aligned_cols=49 Identities=12% Similarity=-0.036 Sum_probs=30.1
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCCccc--CCcccccccc
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPFSSV--EPLRVEDLCI 132 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~s~~--~P~~veDlp~ 132 (211)
++..++++| |..|.-|+.||.+....+-..+..+..-.. .-+....+|.
T Consensus 72 ~~~~~ivv~---C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~ 122 (134)
T 1vee_A 72 PENTTLYIL---DKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPW 122 (134)
T ss_dssp GGGCEEEEE---CSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCE
T ss_pred CCCCEEEEE---eCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCC
Confidence 334578888 999998888887766555444555543221 2355555554
No 43
>1muk_A Minor core protein lambda 3; single subunit polymerase fold, fingers, PALM, thumb, right hand configuration, viral protein; 2.50A {Reovirus SP} SCOP: e.8.1.4 PDB: 1mwh_A* 1n1h_A* 1n35_A* 1n38_A* 1uon_A* 2cse_1
Probab=31.06 E-value=12 Score=38.84 Aligned_cols=26 Identities=15% Similarity=0.514 Sum_probs=24.1
Q ss_pred CCCCCeEEEEecCCCcchhhHHhhhh
Q 040450 177 DHPDKVTFYVDLEKSSSTAAYEYFSS 202 (211)
Q Consensus 177 ~~~~nl~i~FDMeKSGA~lAwdYF~~ 202 (211)
.+|+|-.|++|..-+-|+|+|+||-.
T Consensus 575 S~PPn~~iNiDIKACDASIT~~yFLS 600 (1267)
T 1muk_A 575 SSPPNQSINIDISACDASITWDFFLS 600 (1267)
T ss_dssp HSTTCEEEEEEEETHHHHSCTTTHHH
T ss_pred cCCCCceEeeeeecccccccHHHHHH
Confidence 57999999999999999999999964
No 44
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=30.03 E-value=41 Score=24.93 Aligned_cols=34 Identities=9% Similarity=-0.026 Sum_probs=23.2
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeee
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLL 117 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~fl 117 (211)
++..++++| |..|.-|+.|++.....+-..+..+
T Consensus 80 ~~~~~ivvy---C~~G~rS~~aa~~L~~~G~~~v~~l 113 (137)
T 1qxn_A 80 DPEKPVVVF---CKTAARAALAGKTLREYGFKTIYNS 113 (137)
T ss_dssp CTTSCEEEE---CCSSSCHHHHHHHHHHHTCSCEEEE
T ss_pred CCCCeEEEE---cCCCcHHHHHHHHHHHcCCcceEEE
Confidence 445578999 8899888888887655443334444
No 45
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=29.40 E-value=71 Score=25.23 Aligned_cols=37 Identities=16% Similarity=0.060 Sum_probs=25.8
Q ss_pred cccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCC
Q 040450 79 GEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPF 119 (211)
Q Consensus 79 ~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~ 119 (211)
..+...++++| |..|.-|+.++......+ ..+..+..
T Consensus 180 ~~~~~~~iv~~---C~~G~rs~~a~~~L~~~G-~~v~~~~G 216 (230)
T 2eg4_A 180 GLQPGQEVGVY---CHSGARSAVAFFVLRSLG-VRARNYLG 216 (230)
T ss_dssp TCCTTCEEEEE---CSSSHHHHHHHHHHHHTT-CEEEECSS
T ss_pred CCCCCCCEEEE---cCChHHHHHHHHHHHHcC-CCcEEecC
Confidence 34455678888 999999999887665544 44555543
No 46
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=28.67 E-value=1.2e+02 Score=26.59 Aligned_cols=52 Identities=12% Similarity=-0.036 Sum_probs=34.8
Q ss_pred cccchhHHHHHHH-hcccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCC
Q 040450 65 GFRSDAALEAISK-AGEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPF 119 (211)
Q Consensus 65 ~~rs~aaleai~~-~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~ 119 (211)
.|++.+.|+++-. ...+...++++| |..|.-|+.++......+-..+..+..
T Consensus 339 ~~~~~~~l~~~~~~~~~~~~~~ivvy---C~sG~rs~~aa~~L~~~G~~~v~~~~G 391 (423)
T 2wlr_A 339 TMRSADDITAMWKAWNIKPEQQVSFY---CGTGWRASETFMYARAMGWKNVSVYDG 391 (423)
T ss_dssp SBCCHHHHHHHHHTTTCCTTSEEEEE---CSSSHHHHHHHHHHHHTTCSSEEEESS
T ss_pred cCCCHHHHHHHHHHcCCCCCCcEEEE---CCcHHHHHHHHHHHHHcCCCCcceeCc
Confidence 4778777776643 334455678888 999999999987654444334655554
No 47
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=27.65 E-value=2.3e+02 Score=22.40 Aligned_cols=110 Identities=14% Similarity=0.088 Sum_probs=55.9
Q ss_pred HHHHHHHhcccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCCcccCCccccccccCCcceEEE-EecC-----
Q 040450 71 ALEAISKAGEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPFSSVEPLRVEDLCIEGLERVYL-LDFL----- 144 (211)
Q Consensus 71 aleai~~~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~s~~~P~~veDlp~~~~~~VYI-LDFS----- 144 (211)
+++++.++. +..-||.-.||..++..++. ..+..+..+|......+..+++.......+++ ....
T Consensus 80 ~l~~~~~~~---~gd~vl~~~p~~~~~~~~~~------~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~v~i~~p~nptG~ 150 (337)
T 3p1t_A 80 CFDRISAEF---SSMRFVTAWPGFDGYRARIA------VSGLRHFEIGLTDDLLLDPNDLAQVSRDDCVVLANPSNPTGQ 150 (337)
T ss_dssp HHHHHHHHS---TTSEEEEESSSCSHHHHHHT------TSCCEEEEECBCTTSSBCHHHHTTCCTTEEEEEESSCTTTCC
T ss_pred HHHHHHHhc---CCCeEEEeCCCcHHHHHHHH------HcCCEEEEecCCCCCCCCHHHHHhhcCCCEEEEeCCCCCCCC
Confidence 444444443 23456777788887654332 22335666665432233344443222233444 4443
Q ss_pred -CChhHHHHHhhhCCCcEEEeecchhhHhhhcC---CCCCCeEEEEecCCC
Q 040450 145 -GPKGFADALSRRSSCEVIGFDHRKSVLGQITS---DHPDKVTFYVDLEKS 191 (211)
Q Consensus 145 -fp~~fl~~Ls~ka~~sVIvLDHHKSA~e~L~~---~~~~nl~i~FDMeKS 191 (211)
.|.+.+.+|+++.. ++++|==-+.+..-.. ...+++.++.-+.|.
T Consensus 151 ~~~~~~l~~l~~~~~--~~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~ 199 (337)
T 3p1t_A 151 ALSAGELDQLRQRAG--KLLIDETYVDYSSFRARGLAYGENELVFRSFSKS 199 (337)
T ss_dssp CCCHHHHHHHHHHCS--EEEEECTTGGGSSCSSSCCCCBTTEEEEEESSST
T ss_pred CCCHHHHHHHHHhCC--cEEEECCChhhccccccccccCCCEEEEeeCchh
Confidence 45677889998874 4555742222111111 234566677777774
No 48
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=27.41 E-value=53 Score=28.82 Aligned_cols=48 Identities=8% Similarity=0.072 Sum_probs=28.5
Q ss_pred cchhHHHHH-HHhcccCCccEEEEccCC-CCcHHHH-HHHHHhhccCCCceeeeC
Q 040450 67 RSDAALEAI-SKAGEERVKNLTLYNYPS-PSGSLSA-LFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 67 rs~aaleai-~~~~~~~~p~lVLYHypC-~DGf~AA-lAAhL~~~~~~~p~~flP 118 (211)
-+.+.+++. .....+...++|+| | ..|..+| .++|++...+- .+..|-
T Consensus 78 p~~~~f~~~l~~~gi~~d~~VVvY---c~~~G~rsa~ra~~~L~~~G~-~V~~L~ 128 (373)
T 1okg_A 78 PPXAEFIDWCMANGMAGELPVLCY---DDECGAMGGCRLWWMLNSLGA-DAYVIN 128 (373)
T ss_dssp CCHHHHHHHHHHTTCSSSSCEEEE---CSSTTTTTHHHHHHHHHHHTC-CEEEET
T ss_pred CCHHHHHHHHHHcCCCCCCeEEEE---eCCCCchHHHHHHHHHHHcCC-eEEEeC
Confidence 344444433 33444556689999 6 5676665 77776655554 565553
No 49
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=27.07 E-value=53 Score=23.52 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=20.1
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHHhhccC
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHLFHFHL 110 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL~~~~~ 110 (211)
++..++++| |.+|.-|+.||......+
T Consensus 54 ~~~~~ivv~---C~~G~rS~~aa~~L~~~G 80 (103)
T 3iwh_A 54 NKNEIYYIV---CAGGVRSAKVVEYLEANG 80 (103)
T ss_dssp CTTSEEEEE---CSSSSHHHHHHHHHHTTT
T ss_pred cCCCeEEEE---CCCCHHHHHHHHHHHHcC
Confidence 344578888 999999999988655543
No 50
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=24.98 E-value=2.6e+02 Score=24.72 Aligned_cols=26 Identities=4% Similarity=-0.125 Sum_probs=20.2
Q ss_pred ccCCccEEEEccCCCCcHHHHHHHHH
Q 040450 80 EERVKNLTLYNYPSPSGSLSALFAHL 105 (211)
Q Consensus 80 ~~~~p~lVLYHypC~DGf~AAlAAhL 105 (211)
......++|+=.||++=..+-||+++
T Consensus 74 v~~gd~V~i~~~n~~e~~~~~la~~~ 99 (548)
T 2d1s_A 74 LVVDGRIALCSENCEEFFIPVIAGLF 99 (548)
T ss_dssp CCTTCEEEEECSSCTTTHHHHHHHHH
T ss_pred CCCCCEEEEEeCCchhHHHHHHHHHh
Confidence 34445788888899998888888865
No 51
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=24.56 E-value=1.2e+02 Score=25.02 Aligned_cols=52 Identities=13% Similarity=-0.052 Sum_probs=31.5
Q ss_pred cccchhHHHHHHH-hcccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCC
Q 040450 65 GFRSDAALEAISK-AGEERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPF 119 (211)
Q Consensus 65 ~~rs~aaleai~~-~~~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~ 119 (211)
.|++.+.|+++-. ...+...++++| |..|.-|+.++......+-..+..+..
T Consensus 221 ~~~~~~~l~~~~~~~~~~~~~~ivv~---C~sG~rs~~a~~~L~~~G~~~v~~~~G 273 (296)
T 1rhs_A 221 FEKSPEELRAMFEAKKVDLTKPLIAT---CRKGVTACHIALAAYLCGKPDVAIYDG 273 (296)
T ss_dssp CBCCHHHHHHHHHHTTCCTTSCEEEE---CSSSSTHHHHHHHHHHTTCCCCEEESS
T ss_pred cCCCHHHHHHHHHHcCCCCCCCEEEE---CCcHHHHHHHHHHHHHcCCCCceeeCC
Confidence 3777777766533 233445678888 888988888776544433223544443
No 52
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=24.46 E-value=83 Score=26.34 Aligned_cols=48 Identities=10% Similarity=0.111 Sum_probs=29.0
Q ss_pred chhHHHHH-HHhcccCCccEEEEccCCC---CcHHHHHHHHHhhccCCCceeeeC
Q 040450 68 SDAALEAI-SKAGEERVKNLTLYNYPSP---SGSLSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 68 s~aaleai-~~~~~~~~p~lVLYHypC~---DGf~AAlAAhL~~~~~~~p~~flP 118 (211)
+...++.. .....++..++|+| |. .|..|+-++|+....+-..+.+|-
T Consensus 91 ~~~~~~~~~~~lgi~~~~~VVvy---c~~~~g~~~a~ra~~~L~~~G~~~V~~L~ 142 (302)
T 3olh_A 91 GAEHFAEYAGRLGVGAATHVVIY---DASDQGLYSAPRVWWMFRAFGHHAVSLLD 142 (302)
T ss_dssp CHHHHHHHHHHTTCCSSCEEEEE---CCCTTSCSSHHHHHHHHHHTTCCCEEEET
T ss_pred CHHHHHHHHHHcCCCCCCEEEEE---eCCCCCcchHHHHHHHHHHcCCCcEEECC
Confidence 34444443 44444566789999 53 345588888876665544566653
No 53
>2l5b_A Activator of apoptosis harakiri; BCL-2, BH3-only, transmembrane domain; NMR {Synthetic}
Probab=24.44 E-value=15 Score=23.04 Aligned_cols=17 Identities=24% Similarity=0.253 Sum_probs=13.5
Q ss_pred CCCcHHHHHHHHHhhcc
Q 040450 93 SPSGSLSALFAHLFHFH 109 (211)
Q Consensus 93 C~DGf~AAlAAhL~~~~ 109 (211)
|...-.||+||||..++
T Consensus 13 caaa~vaalaawll~rr 29 (32)
T 2l5b_A 13 CAAAQVAALAAWLLGRR 29 (32)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 77778899999996553
No 54
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=24.01 E-value=2.3e+02 Score=24.53 Aligned_cols=59 Identities=5% Similarity=-0.187 Sum_probs=38.8
Q ss_pred ccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCCcccCCccccccccCCcceEEEEecCCChhHHHHHhhhCCC
Q 040450 80 EERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPFSSVEPLRVEDLCIEGLERVYLLDFLGPKGFADALSRRSSC 159 (211)
Q Consensus 80 ~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~s~~~P~~veDlp~~~~~~VYILDFSfp~~fl~~Ls~ka~~ 159 (211)
......++||=.||++=..+-||+++ . |..+..||...|++-+..+.+.+.+
T Consensus 51 ~~~gd~V~i~~~n~~~~~~~~lA~~~-~---------------------------G~v~vpl~~~~~~~~l~~il~~~~~ 102 (521)
T 3l8c_A 51 LLAKSPVLVFGAQTYDMLATFVALTK-S---------------------------GHAYIPVDVHSAPERILAIIEIAKP 102 (521)
T ss_dssp CCTTCCEEEEECSSHHHHHHHHHHHH-T---------------------------TCCEEEEETTSCHHHHHHHHHHSCC
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHH-h---------------------------CCEEEecCccccHHHHHHHHHhCCC
Confidence 33445788888899988888888864 1 1233345666677777766666666
Q ss_pred cEEEeec
Q 040450 160 EVIGFDH 166 (211)
Q Consensus 160 sVIvLDH 166 (211)
++|+.|.
T Consensus 103 ~~ii~~~ 109 (521)
T 3l8c_A 103 SLIIAIE 109 (521)
T ss_dssp SEEEESS
T ss_pred CEEEecC
Confidence 7776653
No 55
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=23.78 E-value=2.8e+02 Score=22.17 Aligned_cols=95 Identities=8% Similarity=0.082 Sum_probs=52.2
Q ss_pred EEEEccCCCCcHHHHHHHHHhhccCCCceeeeCCcccCCccccccccCCcceEEEEe------cCCChhHHHHHhhhCCC
Q 040450 86 LTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPFSSVEPLRVEDLCIEGLERVYLLD------FLGPKGFADALSRRSSC 159 (211)
Q Consensus 86 lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~s~~~P~~veDlp~~~~~~VYILD------FSfp~~fl~~Ls~ka~~ 159 (211)
-||.- ||..|+..++.. . +..+..+|....-.+..+++ ...+-|||.. ...|.+.+.+|++.+ .
T Consensus 99 ~Vl~~-p~y~~~~~~~~~---~---g~~~~~v~~~~~~~~d~~~l--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~-~ 168 (335)
T 1uu1_A 99 SVFFP-PTYSCYRIFAKA---V---GAKFLEVPLTKDLRIPEVNV--GEGDVVFIPNPNNPTGHVFEREEIERILKTG-A 168 (335)
T ss_dssp EEECS-SSCHHHHHHHHH---H---TCEEEECCCCTTSCCCCCCC--CTTEEEEEESSCTTTCCCCCHHHHHHHHHTT-C
T ss_pred cEEEC-CCcHHHHHHHHH---c---CCeEEEeccCCCCCCCHHHc--CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhC-C
Confidence 35555 777666543321 1 22455566432212345555 3445666643 456778889999888 4
Q ss_pred cEEEeecchhhHhh---hcC-CCCCCeEEEEecCCC
Q 040450 160 EVIGFDHRKSVLGQ---ITS-DHPDKVTFYVDLEKS 191 (211)
Q Consensus 160 sVIvLDHHKSA~e~---L~~-~~~~nl~i~FDMeKS 191 (211)
++++|=-.+-... +.. ...+++.+..-+.|+
T Consensus 169 -~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 203 (335)
T 1uu1_A 169 -FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKA 203 (335)
T ss_dssp -EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTT
T ss_pred -EEEEECcchhhcchhHHHHhhhCCCEEEEecchhh
Confidence 8999954432211 110 123566677788886
No 56
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=23.57 E-value=2e+02 Score=25.01 Aligned_cols=25 Identities=12% Similarity=-0.033 Sum_probs=19.4
Q ss_pred cCCccEEEEccCCCCcHHHHHHHHH
Q 040450 81 ERVKNLTLYNYPSPSGSLSALFAHL 105 (211)
Q Consensus 81 ~~~p~lVLYHypC~DGf~AAlAAhL 105 (211)
.....++|+-.||++-..+-||+++
T Consensus 71 ~~gd~V~i~~~n~~~~~~~~lA~~~ 95 (529)
T 2v7b_A 71 HPEERILLVMLDTVALPVAFLGALY 95 (529)
T ss_dssp CTTCEEEEECCSSTHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHH
Confidence 3445788888899998888888864
No 57
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=22.97 E-value=1.3e+02 Score=23.60 Aligned_cols=32 Identities=16% Similarity=0.048 Sum_probs=22.7
Q ss_pred CccEEEEccCCCCcH-HHHHHHHHhhccCCCceeeeC
Q 040450 83 VKNLTLYNYPSPSGS-LSALFAHLFHFHLNLPCLLLP 118 (211)
Q Consensus 83 ~p~lVLYHypC~DGf-~AAlAAhL~~~~~~~p~~flP 118 (211)
..++|+| |..|. .|+.++|... .+-..+.++-
T Consensus 61 ~~~ivvy---c~~g~~~s~~a~~~L~-~G~~~v~~l~ 93 (230)
T 2eg4_A 61 RSPVVLY---DEGLTSRLCRTAFFLG-LGGLEVQLWT 93 (230)
T ss_dssp CSSEEEE---CSSSCHHHHHHHHHHH-HTTCCEEEEC
T ss_pred CCEEEEE---cCCCCccHHHHHHHHH-cCCceEEEeC
Confidence 4578999 88887 7888888766 5544566653
No 58
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=22.77 E-value=3e+02 Score=23.11 Aligned_cols=35 Identities=9% Similarity=0.244 Sum_probs=22.0
Q ss_pred CcceEEE------EecCCChhHHHHHh---hhCCCcEEEeecchh
Q 040450 134 GLERVYL------LDFLGPKGFADALS---RRSSCEVIGFDHRKS 169 (211)
Q Consensus 134 ~~~~VYI------LDFSfp~~fl~~Ls---~ka~~sVIvLDHHKS 169 (211)
+.+-||| ....++.+.+.+|. ++.. -++++|=--+
T Consensus 209 ~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~-~~li~Dea~~ 252 (449)
T 3qgu_A 209 RTDIIFFCSPNNPTGAAATRAQLTELVNFARKNG-SILVYDAAYA 252 (449)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHT-CEEEEECTTG
T ss_pred CCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCC-cEEEEEcchH
Confidence 4466776 45566777777664 4553 5788885433
No 59
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=22.23 E-value=2.8e+02 Score=24.39 Aligned_cols=27 Identities=15% Similarity=0.018 Sum_probs=21.2
Q ss_pred cccCCccEEEEccCCCCcHHHHHHHHH
Q 040450 79 GEERVKNLTLYNYPSPSGSLSALFAHL 105 (211)
Q Consensus 79 ~~~~~p~lVLYHypC~DGf~AAlAAhL 105 (211)
.......++|+=.||++=..+-||+++
T Consensus 71 Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 97 (550)
T 3rix_A 71 GLNTNHRIVVCSENSLQFFMPVLGALF 97 (550)
T ss_dssp TCCTTCEEEEECSSCTTTHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcccHHHHHHHHHH
Confidence 344455789999999998888888865
No 60
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=21.71 E-value=2.8e+02 Score=23.97 Aligned_cols=58 Identities=10% Similarity=0.053 Sum_probs=39.3
Q ss_pred ccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCCcccCCccccccccCCcceEEEEecCCChhHHHHHhhhCCC
Q 040450 80 EERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPFSSVEPLRVEDLCIEGLERVYLLDFLGPKGFADALSRRSSC 159 (211)
Q Consensus 80 ~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~s~~~P~~veDlp~~~~~~VYILDFSfp~~fl~~Ls~ka~~ 159 (211)
......++||-.||++=..+-||+++ - |..+..+|...|.+-+..+.+.+.+
T Consensus 48 ~~~gd~V~i~~~n~~e~~~~~la~~~-~---------------------------G~v~vpl~~~~~~~~l~~il~~~~~ 99 (512)
T 3fce_A 48 PDDRSPIMVYGHMQPEMIINFLGCVK-A---------------------------GHAYIPVDLSIPADRVQRIAENSGA 99 (512)
T ss_dssp TTCCCCEEEEESSCHHHHHHHHHHHH-T---------------------------TCCEEEEETTSCHHHHHHHHHHSCC
T ss_pred CCCCCEEEEEeCCCHHHHHHHHHHHH-h---------------------------CCEEEeeCCCCcHHHHHHHHHhcCC
Confidence 34445788888899988888888764 1 1233445666777777777777766
Q ss_pred cEEEee
Q 040450 160 EVIGFD 165 (211)
Q Consensus 160 sVIvLD 165 (211)
++|+.|
T Consensus 100 ~~~i~~ 105 (512)
T 3fce_A 100 KLLLSA 105 (512)
T ss_dssp CEEEES
T ss_pred CEEEec
Confidence 777765
No 61
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=20.99 E-value=2.8e+02 Score=22.57 Aligned_cols=101 Identities=12% Similarity=-0.065 Sum_probs=49.3
Q ss_pred cEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCCcc-cCCccccccc---cCCcceEEEEec------CCChhHHHHHh
Q 040450 85 NLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPFSS-VEPLRVEDLC---IEGLERVYLLDF------LGPKGFADALS 154 (211)
Q Consensus 85 ~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~s~-~~P~~veDlp---~~~~~~VYILDF------Sfp~~fl~~Ls 154 (211)
.-||.-.||..|+..++.. .+..+..+|... ...+..+++. ....+.|||... ..|.+.+.+|.
T Consensus 125 d~vl~~~p~~~~~~~~~~~------~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~ 198 (398)
T 3ele_A 125 DEFITIAPYFPEYKVFVNA------AGARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLS 198 (398)
T ss_dssp CEEEEESSCCTHHHHHHHH------TTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred CEEEEeCCCchhhHHHHHH------cCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHH
Confidence 4677788888886654432 233566666542 1123334432 123455665344 34555666544
Q ss_pred hhCC--------CcEEEeecchhhHh----hhcC--CCCCCeEEEEecCCC
Q 040450 155 RRSS--------CEVIGFDHRKSVLG----QITS--DHPDKVTFYVDLEKS 191 (211)
Q Consensus 155 ~ka~--------~sVIvLDHHKSA~e----~L~~--~~~~nl~i~FDMeKS 191 (211)
+.++ .-+|+.|==-+.+. .++. ...+++.+..-+.|+
T Consensus 199 ~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 249 (398)
T 3ele_A 199 DLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKS 249 (398)
T ss_dssp HHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTT
T ss_pred HHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhc
Confidence 4331 14778882211110 1111 223566666677774
No 62
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=20.65 E-value=2.8e+02 Score=24.40 Aligned_cols=59 Identities=3% Similarity=-0.153 Sum_probs=38.4
Q ss_pred ccCCccEEEEccCCCCcHHHHHHHHHhhccCCCceeeeCCcccCCccccccccCCcceEEEEecCCChhHHHHHhhhCCC
Q 040450 80 EERVKNLTLYNYPSPSGSLSALFAHLFHFHLNLPCLLLPFSSVEPLRVEDLCIEGLERVYLLDFLGPKGFADALSRRSSC 159 (211)
Q Consensus 80 ~~~~p~lVLYHypC~DGf~AAlAAhL~~~~~~~p~~flP~s~~~P~~veDlp~~~~~~VYILDFSfp~~fl~~Ls~ka~~ 159 (211)
......++|+=.||++=..+-||+++ -+ ..+..||-.+|.+-+..+-+.+.+
T Consensus 74 v~~gd~V~i~~~~~~~~~~~~lA~~~-~G---------------------------~~~vpl~~~~~~~~l~~il~~~~~ 125 (549)
T 3g7s_A 74 VRKGEHVGVCIPNSIDYVMTIYALWR-VA---------------------------ATPVPINPMYKSFELEHILNDSEA 125 (549)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHH-TT---------------------------CEEEECCTTCCHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH-hC---------------------------CEEEccCCCCCHHHHHHHHHhcCC
Confidence 34445788888899998888888864 11 223334555666666666666666
Q ss_pred cEEEeec
Q 040450 160 EVIGFDH 166 (211)
Q Consensus 160 sVIvLDH 166 (211)
++|+.|.
T Consensus 126 ~~~i~~~ 132 (549)
T 3g7s_A 126 TTLVVHS 132 (549)
T ss_dssp SEEEEEG
T ss_pred CEEEECh
Confidence 7776664
No 63
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=20.32 E-value=2.3e+02 Score=25.01 Aligned_cols=26 Identities=0% Similarity=-0.238 Sum_probs=19.8
Q ss_pred ccCCccEEEEccCCCCcHHHHHHHHH
Q 040450 80 EERVKNLTLYNYPSPSGSLSALFAHL 105 (211)
Q Consensus 80 ~~~~p~lVLYHypC~DGf~AAlAAhL 105 (211)
......++|+=.||++=..+-||+++
T Consensus 69 v~~gd~V~i~~~n~~e~~~~~lA~~~ 94 (541)
T 1v25_A 69 VGVGDRVATLGFNHFRHLEAYFAVPG 94 (541)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHh
Confidence 33445788888899998888888864
Done!