BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040453
(547 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=MCH1 PE=3 SV=1
Length = 486
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 341 EPSCWTTCFSPPDRGEDYTILQALFSLDMLILFFATICGVGGTLTAI-DNLGQIGGSL-- 397
E S C P G + L+ F+ LF +GG +N+G I ++
Sbjct: 248 EASTDCNCDGP---GHEGATLKEFFTDKTAWLFLLCFVFIGGPFEMFQNNMGAILDTVTV 304
Query: 398 -GYPKKSISTFVSLVSIWNYLGRVVSGFVSEIFLAKYKFPRPLMLTIILLLSCIGHLLIA 456
S ST VSL + ++ + R+V GF SE + RP++L++I L++ HL+
Sbjct: 305 ENADSPSFSTHVSLFATFSTVSRLVVGFSSEAM--ESHVSRPVLLSVIALVAACIHLM-- 360
Query: 457 FNVPGGLY----------VASIIIGFCFGAQWPLVFAIISELFGLKYYSTLY 498
VP G++ V +I+ GF +G+ + LV I+++++G+ T++
Sbjct: 361 --VPSGIFTVFDNAKYFSVVTIVNGFSYGSSFTLVPTIVTKVWGIANLGTIW 410
>sp|Q03795|YM30_YEAST Uncharacterized membrane protein YMR155W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1
SV=1
Length = 547
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 45 LIMAAAGATYMFSLYSGDIKYALGYDQTTLNLLSFFKDLGANV-GILSGLINEITPPWVV 103
++ AG Y+FS Y+ + + + LSF +G+++ GIL+G++ + +P
Sbjct: 27 VVALGAGTPYLFSFYAPQLLSKCHIPVSASSKLSFSLTIGSSLMGILAGIVVDRSPKLSC 86
Query: 104 LVLGAVLNFFGYFMIWLAVTKKIARPQVWHMCL-YICVGANSQSFANTGSLVTCVK-NFP 161
L+ G++ F Y ++ L + + + + L I G+ S +A+ V C NFP
Sbjct: 87 LI-GSMCVFIAYLILNLCYKHEWSSTFLISLSLVLIGYGSVSGFYAS----VKCANTNFP 141
Query: 162 ESRGVVLGILKGYVGLSGAIITQLYRAFYGDDTKSLILFI 201
+ RG GLSG + + L +G++ + + +F+
Sbjct: 142 QHRGTAGAFPVSLYGLSGMVFSYLCSKLFGENIEHVFIFL 181
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 408 VSLVSIWNYLGRVVSGFVSEIFLAKYKFPRPLMLTIILLL-----SCIGHLLIAFNVPG- 461
V+L+S+ ++ GR+ SG +S+ + K+K R + I LL + I H + P
Sbjct: 368 VTLLSLLSFCGRLSSGPISDFLVKKFKAQRLWNIVIASLLVFLASNKISHDFSSIEDPSL 427
Query: 462 -------GLYVASIIIGFCFGAQWPLVFAIISELFGLKYYSTLY 498
+ V S I G+ FG + +I+++ FG YSTL+
Sbjct: 428 RASKSFKNISVCSAIFGYSFGVLFGTFPSIVADRFGTNGYSTLW 471
>sp|Q96TW9|MCH1_HANAN Probable transporter MCH1 OS=Hansenula anomala GN=MCH1 PE=3 SV=1
Length = 489
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 371 ILFFATICGVGGTLTAIDNLGQIGGSLGYPKKSISTFVSLVSIWNYLGRVVSGFVSEIFL 430
+L F+ + +G + I N+G + ++ P IS V++ ++++ L R+ G +S+ +
Sbjct: 266 VLLFSLLLSIGPSEMYITNMGSLVKAIT-PNSLISDQVAIHAVFSTLSRLSLGALSDFLV 324
Query: 431 AKYKFPRPLMLTIILLLSCIGHLLIAFN--VPGGLYVASIIIGFCFGAQWPLVFAIISEL 488
Y+ R +L I++L + IA + V Y+ S + GF +G + L +I +
Sbjct: 325 TNYQISRSWLLLSIIVLGFFTQIFIATSTFVKDQYYIISALSGFSYGGLFTLYPTVIFSI 384
Query: 489 FGLKYYSTLYNFGGAASPLGSYLLNVRVAGHLYDK 523
+G + + + + A +GS + V G +YD
Sbjct: 385 WGPEIFGSAWGSFMIAPAIGSTTFGM-VFGLVYDS 418
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Query: 49 AAGATYMFSLYSGDIKYALGYDQTTLNLLSFFKDLGANVGI-LSGLINEITPPWVVLVLG 107
AG+ +F+L++ +++ L Y Q +N++ F +G + + + G + + P ++ V+
Sbjct: 41 CAGSVLLFALFTPVLQHQLHYTQFQINIIGSFTSIGMYLPLPVLGYLADCHGPVLLSVIS 100
Query: 108 AVLNFFGYFMIWLAVTKKIARPQVWHMCLYICVGANSQSFANTGSLVTCVKNFPESRGVV 167
+ GY LA T W++ + + + S +L+TC K +P+S+G+
Sbjct: 101 VLFFSPGY---TLAATVVQNDWSFWYLAISFGLIGCATSALYFTALLTCAKIYPKSKGLT 157
Query: 168 LGILKGYVGLSGAI 181
+ GLS I
Sbjct: 158 ISAPVTCYGLSSLI 171
>sp|P37662|YHJX_ECOLI Inner membrane protein YhjX OS=Escherichia coli (strain K12)
GN=yhjX PE=1 SV=1
Length = 402
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 49/234 (20%)
Query: 283 EEFKLWKSKQMALNNPSVEIITEKPSQEVHSPSSNLEQTVSVAAAPEEVSSGSTSSSKEP 342
+ F +W + + + ++ + P QEV + + +E+ ++A S ++P
Sbjct: 166 KTFVIWGAIALLMIVFGATLMKDAPKQEVKTSNGVVEKDYTLA-----------ESMRKP 214
Query: 343 SCWTTCFSPPDRGEDYTILQALFSLDMLILFFATICGVGGTLTAIDNLGQIGGSLGYPKK 402
W ML + F T C G L I I SL +
Sbjct: 215 QYW-----------------------MLAVMFLTACMSG--LYVIGVAKDIAQSLAHLDV 249
Query: 403 -SISTFVSLVSIWNYLGRVVSGFVSEIFLAKYKFPRPLMLTIILLLSCIGHLLIAFNVPG 461
S + V+++SI N GR+V G +S+ K R ++TI ++S +G + F
Sbjct: 250 VSAANAVTVISIANLSGRLVLGILSD------KIARIRVITIGQVISLVGMAALLFAPLN 303
Query: 462 GL--YVASIIIGFCFGAQWPLVFAIISELFGL----KYYSTLYNFGGAASPLGS 509
+ + A + F FG + +++SE FGL K Y +Y G S GS
Sbjct: 304 AVTFFAAIACVAFNFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGS 357
>sp|Q7RTY0|MOT13_HUMAN Monocarboxylate transporter 13 OS=Homo sapiens GN=SLC16A13 PE=2
SV=1
Length = 426
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 407 FVSLVSIWNYLGRVVSGFVSEIFLAKYKFPRPLMLTIILLLSCIGHLLIAFNV---PGGL 463
+S+V+I + +GRVVSG++ + P P+ ++L + G L F V P L
Sbjct: 254 LLSVVAISDLVGRVVSGWLGD------AVPGPVTRLLMLWTTLTGVSLALFPVAQAPTAL 307
Query: 464 YVASIIIGFCFGAQWPLVFAIISELF-------GLKYYSTLYNFGG-AASPLGSYLLNV 514
++ GF GA PL F+++ EL GL + + GG PL YL +V
Sbjct: 308 VALAVAYGFTSGALAPLAFSVLPELIGTRRIYCGLGLLQMIESIGGLLGPPLSGYLRDV 366
>sp|Q17QR6|MOT13_BOVIN Monocarboxylate transporter 13 OS=Bos taurus GN=SLC16A13 PE=2 SV=1
Length = 426
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 396 SLGYPKKSISTFVSLVSIWNYLGRVVSGFVSEIFLAKYKFPRPLMLTIILLLSCIGHLLI 455
LG+ + +S+ +I + +GRV SG++ + P P+ ++L + G +L
Sbjct: 243 DLGWDPLPAAFLLSVAAISDLVGRVASGWLGD------AVPGPVARLLMLWTTLTGVILA 296
Query: 456 AFNV---PGGLYVASIIIGFCFGAQWPLVFAIISELF-------GLKYYSTLYNFGG-AA 504
+ V P GL ++ GF GA P+ F+++ EL GL + + GG
Sbjct: 297 LYPVAEAPTGLVALTMAYGFTSGALTPVAFSVLPELVGTGKIYCGLGLVQMVESIGGLLG 356
Query: 505 SPLGSYLLNV 514
+PL YL +V
Sbjct: 357 APLSGYLRDV 366
>sp|Q66HE2|MOT13_RAT Monocarboxylate transporter 13 OS=Rattus norvegicus GN=Slc16a13
PE=2 SV=1
Length = 428
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 396 SLGYPKKSISTFVSLVSIWNYLGRVVSGFVSEIFLAKYKFPRPLMLTIILLLSCIGHLLI 455
LG+ + +S+ +I + +GRV SG++ + P P+ ++L + G L
Sbjct: 243 DLGWDPLPAAFLLSVAAISDLVGRVASGWLGD------AVPGPVARLLMLWTTLTGVSLA 296
Query: 456 AFNVPGG---LYVASIIIGFCFGAQWPLVFAIISELF-------GLKYYSTLYNFGG-AA 504
F V L V ++ GF GA P+ F++I EL GL + + GG
Sbjct: 297 LFPVAQASTTLVVLAVAYGFTSGALTPVAFSVIPELVGTGRIYCGLGLVQMIESVGGLLG 356
Query: 505 SPLGSYLLNV 514
+PL YL +V
Sbjct: 357 APLSGYLRDV 366
>sp|Q08777|MCH5_YEAST Riboflavin transporter MCH5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MCH5 PE=1 SV=2
Length = 521
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 367 LDMLILF--FATICGVGGTLTAIDNLGQIGGSLGYPKKSISTFVSLVSIWNYLGRVVSGF 424
LDM LF T+ +A+ G S G T + ++++ GR V G+
Sbjct: 328 LDMKYLFCVLGTVFSELSINSALTYYGSYATSHGISANDAYTLIMIINVCGIPGRWVPGY 387
Query: 425 VSEIFLAKYKFPRPLMLTIILLLSCIGHLLIAFNVPGGLYVASIIIGFCFGAQW---PLV 481
+S+ F ++ +LT+ +++ +G L N+ +YV S + GFC G+ + P+
Sbjct: 388 LSDKF-GRFNVAIATLLTLFIVMF-VGWLPFGTNLTN-MYVISALYGFCSGSVFSLLPVC 444
Query: 482 FAIIS--ELFGLKYYSTLY 498
IS E FG K YST+Y
Sbjct: 445 CGQISKTEEFG-KRYSTMY 462
>sp|Q6CPY8|MCH1_KLULA Probable transporter MCH1 OS=Kluyveromyces lactis (strain ATCC 8585
/ CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=MCH1 PE=3 SV=1
Length = 479
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 418 GRVVSGFVSEIFLAKYKFPRPLMLTIILLLSCIGHLLI--AFNVPGGLYVA--SIIIGFC 473
R++SG ++F K+ +PR ++ ++LL + + ++I A NV Y+A S I GF
Sbjct: 320 SRLLSGLFIDLF-TKWNWPRIPLIILMLLSAILAQVIIIHAMNVVNISYIAIASAISGFT 378
Query: 474 FGAQWPLVFAIISELFGLKYYSTLYNFGGAASPLGSYLLNVRVAGHLYDKEAKRQMAAS 532
+G + + A+ L+G + + T Y GS V A ++D K + A+
Sbjct: 379 YGGLFTIFPALTLNLWGDEVFGTAYGTFMLGPAFGSSFFGVMYA-QVHDSNCKSVIPAA 436
>sp|Q10185|ABC2_SCHPO ATP-binding cassette transporter abc2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=abc2 PE=1 SV=1
Length = 1478
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 197 LILFIGWLPAAISFAFLRTIRILKVIRQPNELKVFYNFLYISLA----LAGFLMMII--- 249
++L + W I+ + +++R+ RQ + N++ + L FL +I+
Sbjct: 336 MVLGMRWRSELITAIYRKSLRLSSAARQSRSVGDIVNYMSVDTQKVCDLTMFLFVIVSGP 395
Query: 250 --IVEKQTD-FTRSEYG-VSAAIVMFLLFFPLVVVVIEEFKLWKSKQMALNNPSVEIITE 305
IV T+ + YG +S A V FLLF P VV+ FK ++++QM + + +TE
Sbjct: 396 FQIVLALTNLYHLVGYGALSGAFVTFLLF-PCNVVIASIFKRFQNRQMKNKDARSQFMTE 454
>sp|Q8CE94|MOT13_MOUSE Monocarboxylate transporter 13 OS=Mus musculus GN=Slc16a13 PE=2
SV=1
Length = 428
Score = 32.7 bits (73), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 396 SLGYPKKSISTFVSLVSIWNYLGRVVSGFVSEIFLAKYKFPRPLMLTIILLLSCIGHLLI 455
LG+ + +S+ ++ + +GRV SG++ + P P+ ++L + G L
Sbjct: 243 DLGWDPLPAAFLLSVAAVSDLVGRVASGWLGD------AVPGPVARLLMLWTTLTGVSLA 296
Query: 456 AFNVPGG---LYVASIIIGFCFGAQWPLVFAIISELF-------GLKYYSTLYNFGG-AA 504
F V L V ++ GF GA P+ F+++ EL G+ + + GG
Sbjct: 297 LFPVAQASSTLVVLAVAYGFTSGALTPVAFSVLPELVGTGRIYCGMGLVQMIESIGGLLG 356
Query: 505 SPLGSYLLNV 514
+PL YL +V
Sbjct: 357 APLSGYLRDV 366
>sp|Q6BN11|MCH1_DEBHA Probable transporter MCH1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=MCH1 PE=3 SV=2
Length = 486
Score = 32.7 bits (73), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 9/157 (5%)
Query: 41 FASFLIMAAAGATYMFSLYSGDIKYALGYDQTTLNLLSFFKDLGANVGI-LSGLINEITP 99
F S +G+ +FSL+S + G + +N ++ +G + + + G + +
Sbjct: 34 FISLFSCLTSGSIMLFSLFSSSLHELYGINYLHINFIASLSAIGMYLCLPVLGYLADCYG 93
Query: 100 PWVVLVLGAVLNFFGYFMIWLAVTKKIARPQVWHMCLY---IC---VGANSQSFANTGSL 153
P +L L ++ F + + V K + V + LY IC +G + S + SL
Sbjct: 94 P-SLLSLISIWFFVPSYFVNSQVIKSLEYNNVMKIHLYAFGICFFFIGLATSSLYFS-SL 151
Query: 154 VTCVKNFPESRGVVLGILKGYVGLSGAIITQLYRAFY 190
+TC K +PE +G+ + + GLS + +QL + Y
Sbjct: 152 LTCAKIYPEHKGLAISLPVTCYGLSTLLGSQLMKLSY 188
>sp|Q59MJ2|MCH1_CANAL Probable transporter MCH1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=MCH1 PE=3 SV=1
Length = 436
Score = 32.3 bits (72), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 20/174 (11%)
Query: 43 SFLIMAAAGATYMFSLYSGDIKYALGYDQTTLNLLSFFKDLGA--NVGILSGLINEITPP 100
S L AG+ +F+LY+ LG +N++S LG + +L L + P
Sbjct: 33 SLLSCLVAGSILLFTLYTSSFHEVLGLSYLQINMISSLSALGMYFCLPVLGYLADSYGP- 91
Query: 101 WVVLVLGAVLNFFG--YFMIWLAVTKKIARPQ---VWHMCLYICVGANSQSFANTGSLVT 155
A+L+ F +F V + Q V C+ C + S SL+T
Sbjct: 92 -------ALLSLFSIWFFCPSYFVNSYLVSTQSGSVIGFCVCFCFIGLATSSLYFSSLIT 144
Query: 156 CVKNFPESRGVVLGILKGYVGLSGAIITQLYRA--FYGDDTKSLIL---FIGWL 204
C + P+ +G+ + + GLS + Q+ + F+ D L + F WL
Sbjct: 145 CARICPDHKGLAISLPITCYGLSALLGAQILKLPYFHRHDVLDLEVVFSFFAWL 198
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,863,277
Number of Sequences: 539616
Number of extensions: 8337848
Number of successful extensions: 39185
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 39095
Number of HSP's gapped (non-prelim): 134
length of query: 547
length of database: 191,569,459
effective HSP length: 123
effective length of query: 424
effective length of database: 125,196,691
effective search space: 53083396984
effective search space used: 53083396984
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)