BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040458
(732 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3VTA|A Chain A, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
pdb|3VTA|B Chain B, Crystal Structure Of Cucumisin, A Subtilisin-Like
Endoprotease From Cucumis Melo L
Length = 621
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/490 (37%), Positives = 257/490 (52%), Gaps = 52/490 (10%)
Query: 247 YFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVHLG 306
YF+DAIAI +F A + G+ S SAGNGGP T +++PW+ +V A T+DR F V +G
Sbjct: 172 YFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIG 231
Query: 307 NGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSAS---LCLEGSLDPAFVRGKIVVC 363
NG+ GVS+ + +Q Y LV G+ S C + S++P ++GKIVVC
Sbjct: 232 NGQSFQGVSINT----FDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVC 287
Query: 364 DRGINSRPXXXXXXXXXXXXXMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMS 423
+ P ++ +N AD + LP++ + +YI S
Sbjct: 288 EASFG--PHEFFKSLDGAAGVLMTSN-----TRDYADSYPLPSSVLDPNDLLATLRYIYS 340
Query: 424 AEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPD 483
+SP +FK T + APVV SFS+RGPN T +++KPD+ PG+ ILAAWP
Sbjct: 341 I---RSPGAT--IFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPS 395
Query: 484 KVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVD 543
GI +R T FNI+SGTSM+CPH++G+A +K +P WSPAAI+SALMTTA ++
Sbjct: 396 VAPVGGI---RRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMN 452
Query: 544 NRGETMIDESTGNTSTALDFGAGHVHPQKAMNPGLIYDLTSYDYVNFLCNSNYTVNNIQV 603
R N +G+GHV+P KA+ PGL+YD DYV FLC Y ++
Sbjct: 453 AR---------FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRR 503
Query: 604 ITRRKADCSGATRAGHVGNLNYPSL------SAVFQQYGKHKMSTHFIRTVTNVGDPNSA 657
IT + C+ G V +LNYPS S F QY F RT+T+V S
Sbjct: 504 ITGDYSACTSG-NTGRVWDLNYPSFGLSVSPSQTFNQY--------FNRTLTSVAPQAST 554
Query: 658 YKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSMKSGKIVWSDGK 717
Y+ I P G+T++V P L F +G + +F + V + + S +VWSDG
Sbjct: 555 YRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSIKGF------VVSASLVWSDGV 608
Query: 718 HNVTSPIVVT 727
H V SPI +T
Sbjct: 609 HYVRSPITIT 618
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 70/115 (60%), Gaps = 15/115 (13%)
Query: 108 TTRSPQFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKG 167
TTRS FLG + + + S S++V+GV+DTG+WPE SF+D P P KWKG
Sbjct: 1 TTRSWDFLGFPLT------VPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKG 54
Query: 168 QCVTTNDFPATSCNRKLIGARFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTAS 222
C T+N+F CNRK+IGAR + G + G +N PRD++GHGTHTAS
Sbjct: 55 TCETSNNF---RCNRKIIGARSYHIGRPISPGDVN------GPRDTNGHGTHTAS 100
>pdb|3I6S|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I6S|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3
pdb|3I74|A Chain A, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
pdb|3I74|B Chain B, Crystal Structure Of The Plant Subtilisin-Like Protease
Sbt3 In Complex With A Chloromethylketone Inhibitor
Length = 649
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 186/490 (37%), Positives = 265/490 (54%), Gaps = 33/490 (6%)
Query: 246 PYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVHL 305
P + DAI+IA+FGA GV VSASAGN GPG ++ N +PW+ V +G DR F + L
Sbjct: 179 PLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL 238
Query: 306 GNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDR 365
GNG I G S++ +D ++Y + S D S L L +P IV+CD
Sbjct: 239 GNGLKIRGWSLFPARAFVRDS--PVIYNKTLS-DCSSEEL-LSQVENP---ENTIVICDD 291
Query: 366 GINSRPXXXXXXXXXXXXXMILAN--GVFDGEGLVADCHVLPATSVGAASGDEIRKYIMS 423
+ + ++ GVF P V G ++ Y+
Sbjct: 292 NGDFSDQMRIITRARLKAAIFISEDPGVFRSATFPN-----PGVVVNKKEGKQVINYV-- 344
Query: 424 AEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPD 483
K+ TATI F+ T ++ +PAPVVA+ SARGP+ I KPD++APG+ ILAA+P
Sbjct: 345 --KNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDILAPGVLILAAYPP 402
Query: 484 KVGPSGIPTD-KRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTV 542
V + I T+ T++ + SGTSMA PH +G+AA+LKAAHP+WSP+AIRSA+MTTA +
Sbjct: 403 NVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPL 462
Query: 543 DNRGETMIDESTGNTSTALDFGAGHVHPQKAMNPGLIYDLTSYDYVNFLCNSNYTVNNIQ 602
DN + + D +T LD GAGHV P +A++PGL+YD T DYVN LC+ N+T +
Sbjct: 463 DNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFK 522
Query: 603 VITRRKA--DCSGATRAGHVGNLNYPSLSAVFQQYGKHK-MSTHFIRTVTNVGDPNSAYK 659
I R A +CS + +LNYPS A++ G + F RTVTNVG + YK
Sbjct: 523 TIARSSASHNCSNPS-----ADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYK 577
Query: 660 VTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSMKSGKIVW--SDGK 717
++ P T++V P+ LVF+ +K ++ + + + S G I W +G
Sbjct: 578 AKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIR----YIGDEGQSRNVGSITWVEQNGN 633
Query: 718 HNVTSPIVVT 727
H+V SPIV +
Sbjct: 634 HSVRSPIVTS 643
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 6/116 (5%)
Query: 108 TTRSPQFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKG 167
TT + FL L SS L S G D+++ V+D+G+WPE SF D + +P++WKG
Sbjct: 1 TTHTSDFLKLNPSSG----LWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKG 56
Query: 168 QCVTTNDFPATSCNRKLIGARFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASI 223
C F A+ CNRKLIGA +F++G + + +N T S RD+DGHGTH ASI
Sbjct: 57 ICKPGTQFNASMCNRKLIGANYFNKGILANDPTVNIT--MNSARDTDGHGTHCASI 110
>pdb|3AFG|A Chain A, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
pdb|3AFG|B Chain B, Crystal Structure Of Pron-Tk-Sp From Thermococcus
Kodakaraensis
Length = 539
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 21/146 (14%)
Query: 429 SPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPS 488
SPA A+ V T V V+ FS+RGP + LKP+V+APG I+AA S
Sbjct: 290 SPAAASKVI--TVGAVDKYDVITDFSSRGPTADNR--LKPEVVAPGNWIIAA-----RAS 340
Query: 489 GIPTDKRKTEFNILS-GTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGE 547
G + ++ + GT+MA PHV+G+AALL AHP W+P +++AL+ TA V + +
Sbjct: 341 GTSMGQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIV--KPD 398
Query: 548 TMIDESTGNTSTALDFGAGHVHPQKA 573
+ D + +GAG V+ KA
Sbjct: 399 EIAD---------IAYGAGRVNAYKA 415
>pdb|1YJB|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 35%
Dimethylformamide
pdb|1YJA|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) (Mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (M50f,
N76d, G169a, Q206c, N218s, And K256y) In 20%
Dimethylformamide
pdb|1SBH|A Chain A, Subtilisin Bpn' 8397+1 (E.C. 3.4.21.14) Mutant (M50f,
N76d, G169a, Q206c, N218s, K256y)
pdb|1YJC|A Chain A, Subtilisin Bpn' 8397+1 (e.c. 3.4.21.14) (mutant With Met
50 Replaced By Phe, Asn 76 Replaced By Asp, Gly 169
Replaced By Ala, Gln 206 Replaced By Cys, Asn 218
Replaced By Ser And Lys 256 Replaced By Tyr) (m50f,
N76d, G169a, Q206c, N218s, And K256y) In 50%
Dimethylformamide
Length = 275
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 24/104 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIXSTLPGN-------------KYGAYSGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALM-TTAYTVDN--RGETMID 551
HV+G AAL+ + HP+W+ +RS+L TT Y D+ G+ +I+
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENTTTYLGDSFYYGKGLIN 269
>pdb|1DUI|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Crystal
Growth Mutant
Length = 266
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 21/94 (22%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGTSMA P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTLPGN-------------KYGAKSGTSMASP 216
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDN 544
HV+G AAL+ + HP+W+ +RS+L T + N
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENTTTKLGN 250
>pdb|1WSD|A Chain A, Alkaline M-Protease Form I Crystal Strcuture
pdb|1MPT|A Chain A, Crystal Structure Of A New Alkaline Serine Protease
(M-Protease) From Bacillus Sp. Ksm-K16
Length = 269
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 13/76 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GTSMA PHV+G+AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTSMATPHVAGVAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTVDN 544
IR+ L TA + N
Sbjct: 238 VQIRNHLKNTATGLGN 253
>pdb|1SBI|A Chain A, Subtilisin Bpn' 8397 (E.C. 3.4.21.14) Mutant (M50f, N76d,
G169a, Q206c, N218s)
Length = 275
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIXSTLPGN-------------KYGAYSGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|3F49|S Chain S, Anion-Triggered Engineered Subtilisin Subt_bacam
Length = 266
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
A FS+ GP + DV+APG++I + P ++ LSGTSMA P
Sbjct: 178 APFSSVGP--------ELDVMAPGVSICSTLPGG-------------KYGALSGTSMASP 216
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+W+ +RS+L TA
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENTA 245
>pdb|1SUE|A Chain A, Subtilisin Bpn' From Bacillus Amyloliquefaciens, Mutant
Length = 266
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGTSMA P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTLPGN-------------KYGAKSGTSMASP 216
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1S01|A Chain A, Large Increases In General Stability For Subtilisin
Bpn(Prime) Through Incremental Changes In The Free
Energy Of Unfolding
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSICSTLPGN-------------KYGAKSGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|2SNI|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ +GTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYNGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLQNT 253
>pdb|1AQN|A Chain A, Subtilisin Mutant 8324
pdb|1AU9|A Chain A, Subtilisin Bpn' Mutant 8324 In Citrate
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSICSTLPGN-------------KYGAKSGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|2SBT|A Chain A, A Comparison Of The Three-Dimensional Structures Of
Subtilisin Bpn And Subtilisin Novo
pdb|1SBT|A Chain A, Atomic Coordinates For Subtilisin Bpn (Or Novo)
Length = 275
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ +GTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYNGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLQNT 253
>pdb|1SPB|S Chain S, Subtilisin Bpn' Prosegment (77 Residues) Complexed With A
Mutant Subtilisin Bpn' (266 Residues). Crystal Ph 4.6.
Crystallization Temperature 20 C Diffraction
Temperature- 160 C
Length = 266
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I++ P ++ SGT+MA P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSIVSTLPGN-------------KYGAKSGTAMASP 216
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1SUA|A Chain A, Subtilisin Bpn'
Length = 266
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I++ P ++ SGT+MA P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSIVSTLPGN-------------KYGAKSGTAMASP 216
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1AK9|A Chain A, Subtilisin Mutant 8321
Length = 275
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAKSGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution
pdb|1TM1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2
pdb|1TM3|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k Mutant
pdb|1TM4|E Chain E, Crystal Structure Of The Complex Of Subtilsin Bpn'with
Chymotrypsin Inhibitor 2 M59g Mutant
pdb|1TM5|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59a Mutant
pdb|1TM7|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59y Mutant
pdb|1TMG|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59f Mutant
pdb|1TO1|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 Y61a Mutant
pdb|1TO2|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59k, In Ph 9 Cryosoak
pdb|1Y1K|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58a Mutant
pdb|1Y33|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 T58p Mutant
pdb|1Y34|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60a Mutant
pdb|1Y3B|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 E60s Mutant
pdb|1Y3C|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R62a Mutant
pdb|1Y3D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R67a Mutant
pdb|1Y3F|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 F69a Mutant
pdb|1Y48|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 R65a Mutant
pdb|1Y4A|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59r/e60s Mutant
pdb|1Y4D|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 M59rE60S MUTANT
Length = 281
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ +GTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYNGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|2SIC|E Chain E, Refined Crystal Structure Of The Complex Of Subtilisin
Bpn' And Streptomyces Subtilisin Inhibitor At 1.8
Angstroms Resolution
pdb|1SIB|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|1SBN|E Chain E, Refined Crystal Structures Of Subtilisin Novo In Complex
With Wild-Type And Two Mutant Eglins. Comparison With
Other Serine Proteinase Inhibitor Complexes
pdb|3SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|5SIC|E Chain E, Molecular Recognition At The Active Site Of Subtilisin
Bpn': Crystallographic Studies Using Genetically
Engineered Proteinaceous Inhibitor Ssi (Streptomyces
Subtilisin Inhibitor)
pdb|1SUP|A Chain A, Subtilisin Bpn' At 1.6 Angstroms Resolution: Analysis Of
Discrete Disorder And Comparison Of Crystal Forms
pdb|2ST1|A Chain A, The Three-dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ +GTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYNGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1S02|A Chain A, Effects Of Engineered Salt Bridges On The Stability Of
Subtilisin Bpn'
Length = 275
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ +GTSMA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYNGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1ST3|A Chain A, The Crystal Structure Of The Bacillus Lentus Alkaline
Protease, Subtilisin Bl, At 1.4 Angstroms Resolution
Length = 269
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GTSMA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|3CNQ|S Chain S, Prosubtilisin Substrate Complex Of Subtilisin Subt_bacam
pdb|3BGO|S Chain S, Azide Complex Of Engineered Subtilisin Subt_bacam
pdb|3CO0|S Chain S, Substrate Complex Of Fluoride-Sensitive Engineered
Subtilisin Subt_bacam
Length = 266
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
A FS+ GP + DV+APG++I + P ++ LSGT+MA P
Sbjct: 178 APFSSVGP--------ELDVMAPGVSICSTLPGG-------------KYGALSGTAMASP 216
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+W+ +RS+L TA
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENTA 245
>pdb|1C9J|A Chain A, Bacillus Lentus Subtilisin K27rN87SV104YN123ST274A Variant
Length = 269
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GTSMA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|1AH2|A Chain A, Serine Protease Pb92 From Bacillus Alcalophilus, Nmr, 18
Structures
Length = 269
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GTSMA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|1NDU|A Chain A, Bacillus Lentus Subtilisin Variant S101gV104N
Length = 269
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GTSMA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|1NDQ|A Chain A, Bacillus Lentus Subtilisin
pdb|1TK2|A Chain A, Crystal Structure Of The Complex Formed Between Alkaline
Proteinase Savinase And Gramicidin S At 1.5a Resolution
pdb|1JEA|A Chain A, Altered Topology And Flexibility In Engineered Subtilisin
pdb|1SVN|A Chain A, Savinase
pdb|3BX1|A Chain A, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|B Chain B, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|1GCI|A Chain A, The 0.78 Angstroms Structure Of A Serine Protease-Bacillus
Lentus Subtilisin
Length = 269
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GTSMA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTSMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|1SUB|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGT MA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYSGTXMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1A2Q|A Chain A, Subtilisin Bpn' Mutant 7186
Length = 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGT MA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYSGTXMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1GNV|A Chain A, Calcium Independent Subtilisin Bpn' Mutant
Length = 266
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGT MA P
Sbjct: 178 ASFSSVGP--------ELDVMAPGVSICSTLPGN-------------KYGAKSGTXMASP 216
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 217 HVAGAAALILSKHPNWTNTQVRSSLENT 244
>pdb|1SUC|A Chain A, Calcium-Independent Subtilisin By Design
pdb|1SUD|A Chain A, Calcium-Independent Subtilisin By Design
Length = 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ SGT MA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAKSGTXMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1GNS|A Chain A, Subtilisin Bpn'
Length = 263
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I W S +P +K + SGT MA P
Sbjct: 175 ASFSSVGP--------ELDVMAPGVSI---W------STLPGNK----YGAKSGTXMASP 213
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 214 HVAGAAALILSKHPNWTNTQVRSSLENT 241
>pdb|1UBN|A Chain A, Selenosubtilisin Bpn
Length = 275
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ +GT MA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYNGTXMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1V5I|A Chain A, Crystal Structure Of Serine Protease Inhibitor Poia1 In
Complex With Subtilisin Bpn'
Length = 275
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ +GT MA P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYNGTXMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1IAV|A Chain A, Structure On Native (Asn 87) Subtilisin From Bacillus
Lentus
Length = 269
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GT MA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|1C9M|A Chain A, Bacillus Lentus Subtilsin (Ser 87) N76dS103AV104I
Length = 269
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GT MA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|1Q5P|A Chain A, S156e/s166d Variant Of Bacillus Lentus Subtilisin
Length = 269
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GT MA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|1C9N|A Chain A, Bacillus Lentus Substilisin Variant (Ser 87)
K27rV104YN123ST274A
Length = 269
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 13/74 (17%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D++APG+N+ + +P + + L+GT MA PHV+G AAL+K +P WS
Sbjct: 191 DIVAPGVNVQSTYPG-------------STYASLNGTXMATPHVAGAAALVKQKNPSWSN 237
Query: 529 AAIRSALMTTAYTV 542
IR+ L TA ++
Sbjct: 238 VQIRNHLKNTATSL 251
>pdb|1ST2|A Chain A, The Three-Dimensional Structure Of Bacillus
Amyloliquefaciens Subtilisin At 1.8 Angstroms And An
Analysis Of The Structural Consequences Of Peroxide
Inactivation
Length = 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ GP + DV+APG++I + P ++ +GTS A P
Sbjct: 187 ASFSSVGP--------ELDVMAPGVSIQSTLPGN-------------KYGAYNGTSXASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTT 538
HV+G AAL+ + HP+W+ +RS+L T
Sbjct: 226 HVAGAAALILSKHPNWTNTQVRSSLENT 253
>pdb|1MEE|A Chain A, The Complex Between The Subtilisin From A Mesophilic
Bacterium And The Leech Inhibitor Eglin-C
Length = 275
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G + DV+APG++I + P + +GTSMA P
Sbjct: 187 ASFSSAGS--------ELDVMAPGVSIQSTLPGGT-------------YGAYNGTSMATP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP W+ A +R L +TA
Sbjct: 226 HVAGAAALILSKHPTWTNAQVRDRLESTA 254
>pdb|2IXT|A Chain A, Sphericase
pdb|2IXT|B Chain B, Sphericase
pdb|3D43|A Chain A, The Crystal Structure Of Sph At 0.8a
pdb|3D43|B Chain B, The Crystal Structure Of Sph At 0.8a
Length = 310
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 17/101 (16%)
Query: 450 VASFSARGPNPETPEIL----KPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGT 505
VA +S+RG + + ++ APG ++ + W + +N +SGT
Sbjct: 203 VADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGT 249
Query: 506 SMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRG 546
SMA PHVSGLAA + A +P S +RS L A +VD +G
Sbjct: 250 SMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKG 290
>pdb|1YU6|A Chain A, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
pdb|1YU6|B Chain B, Crystal Structure Of The Subtilisin Carlsberg:omtky3
Complex
Length = 275
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G E V+APG + + +P + L+GTSMA P
Sbjct: 187 ASFSSVGAELE--------VMAPGAGVYSTYPTNT-------------YATLNGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+ S + +R+ L +TA
Sbjct: 226 HVAGAAALILSKHPNLSASQVRNRLSSTA 254
>pdb|4GI3|A Chain A, Crystal Structure Of Greglin In Complex With Subtilisin
Length = 275
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G E V+APG + + +P + L+GTSMA P
Sbjct: 187 ASFSSVGAELE--------VMAPGAGVYSTYPTNT-------------YATLNGTSMASP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+ S + +R+ L +TA
Sbjct: 226 HVAGAAALILSKHPNLSASQVRNRLSSTA 254
>pdb|1SCJ|A Chain A, Crystal Structure Of Subtilisin-Propeptide Complex
Length = 275
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 21/94 (22%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G + DV+APG++I + P + +GT MA P
Sbjct: 187 ASFSSAGS--------ELDVMAPGVSIQSTLPGGT-------------YGAYNGTCMATP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDN 544
HV+G AAL+ + HP W+ A +R L +TA + N
Sbjct: 226 HVAGAAALILSKHPTWTNAQVRDRLESTATYLGN 259
>pdb|3QTL|A Chain A, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|B Chain B, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|3QTL|C Chain C, Structural Basis For Dual-Inhibition Mechanism Of A
Non-Classical Kazal-Type Serine Protease Inhibitor From
Horseshoe Crab In Complex With Subtilisin
pdb|4HX2|A Chain A, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
pdb|4HX2|C Chain C, Crystal Structure Of Streptomyces Caespitosus Sermetstatin
In Complex With Bacillus Licheniformis Subtilisin
Length = 274
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G E V+APG + + +P + L+GTSMA P
Sbjct: 186 ASFSSVGAELE--------VMAPGAGVYSTYPTNT-------------YATLNGTSMASP 224
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+ S + +R+ L +TA
Sbjct: 225 HVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|1CSE|E Chain E, The High-Resolution X-Ray Crystal Structure Of The Complex
Formed Between Subtilisin Carlsberg And Eglin C, An
Elastase Inhibitor From The Leech Hirudo Medicinalis.
Structural Analysis, Subtilisin Structure And Interface
Geometry
pdb|2SEC|E Chain E, Structural Comparison Of Two Serine Proteinase-Protein
Inhibitor Complexes. Eglin-C-Subtilisin Carlsberg And
Ci-2- Subtilisin Novo
pdb|1OYV|A Chain A, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1OYV|B Chain B, Crystal Structure Of Tomato Inhibitor-Ii In A Ternary
Complex With Subtilisin Carlsberg
pdb|1R0R|E Chain E, 1.1 Angstrom Resolution Structure Of The Complex Between
The Protein Inhibitor, Omtky3, And The Serine Protease,
Subtilisin Carlsberg
pdb|1AF4|A Chain A, Crystal Structure Of Subtilisin Carlsberg In Anhydrous
Dioxane
pdb|1BE6|A Chain A, Trans-Cinnamoyl-Subtilisin In Anhydrous Acetonitrile
pdb|1BE8|A Chain A, Trans-Cinnamoyl-Subtilisin In Water
pdb|1BFK|A Chain A, Crystal Structure Of Subtilisin Carlsberg In 40%
Acetonitrile
pdb|1BFU|A Chain A, Subtilisin Carlsberg In 20% Dioxane
pdb|1SBC|A Chain A, The Refined Crystal Structure Of Subtilisin Carlsberg At
2.5 Angstroms Resolution
pdb|1SCA|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCB|A Chain A, Enzyme Crystal Structure In A Neat Organic Solvent
pdb|1SCD|A Chain A, X-Ray Crystal Structure Of Cross-Linked Subtilism
Carlsberg In Water Vs. Acetonitrile
pdb|2WUV|A Chain A, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile
pdb|2WUW|E Chain E, Crystallographic Analysis Of Counter-Ion Effects On
Subtilisin Enzymatic Action In Acetonitrile (Native
Data)
Length = 274
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G E V+APG + + +P + L+GTSMA P
Sbjct: 186 ASFSSVGAELE--------VMAPGAGVYSTYPTNT-------------YATLNGTSMASP 224
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+ S + +R+ L +TA
Sbjct: 225 HVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|1C3L|A Chain A, Subtilisin-Carlsberg Complexed With Xenon (8 Bar)
pdb|3UNX|A Chain A, Bond Length Analysis Of Asp, Glu And His Residues In
Subtilisin Carlsberg At 1.26a Resolution
Length = 274
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G E V+APG + + +P + L+GTSMA P
Sbjct: 186 ASFSSVGAELE--------VMAPGAGVYSTYPTNT-------------YATLNGTSMASP 224
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+ S + +R+ L +TA
Sbjct: 225 HVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|4DWW|A Chain A, Crystal Structure Of Nattokinase From Bacillus Subtilis
Natto
Length = 275
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 21/94 (22%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G + DV+APG++I + P + +GT MA P
Sbjct: 187 ASFSSVGS--------ELDVMAPGVSIQSTLPGGT-------------YGAYNGTXMATP 225
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDN 544
HV+G AAL+ + HP W+ A +R L +TA + N
Sbjct: 226 HVAGAAALILSKHPTWTNAQVRDRLESTATYLGN 259
>pdb|1SCN|E Chain E, Inactivation Of Subtilisin Carlsberg By
N-(Tert-Butoxycarbonyl-Alanyl-
Prolyl-Phenylalanyl)-O-Benzol Hydroxylamine: Formation
Of Covalent Enzyme-Inhibitor Linkage In The Form Of A
Carbamate Derivative
Length = 276
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G E V+APG + + +P + L+GTSMA P
Sbjct: 186 ASFSSVGAELE--------VMAPGAGVYSTYPTNT-------------YATLNGTSMASP 224
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+ S + +R+ L +TA
Sbjct: 225 HVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|1R6V|A Chain A, Crystal Structure Of Fervidolysin From Fervidobacterium
Pennivorans, A Keratinolytic Enzyme Related To
Subtilisin
Length = 671
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWP--DKVGPSG----IPTDKRKTEFNILS 503
VA FS+R V APG+ IL+ P D +G G +P T ++
Sbjct: 328 VAGFSSRSDGVS--------VGAPGVTILSTVPGEDSIGYEGHNENVPATNGGT-YDYYQ 378
Query: 504 GTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTALD 562
GTSMA PHV+G+ A+L P+ P IR L TA+ + G D TG LD
Sbjct: 379 GTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG---WDHDTGYGLVKLD 434
>pdb|1V6C|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1V6C|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like
Protease Apa1 From Antarctic Psychrotroph
Pseudoalteromonas Sp. As-11
pdb|1WVM|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1WVM|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-Like Serine
Protease Apa1 From Antarctic Psychrotroph
Pseudoaleromonas Sp. As-11, Complexed With Inhibitor
Chymostatin
pdb|1Y9Z|A Chain A, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
pdb|1Y9Z|B Chain B, Crystal Structure Of Psychrophilic Subtilisin-like Serine
Protease From Antarctic Psychrotroph Pseudoalteromonas
Sp. As-11 At 0.14 Nm Resolution
Length = 441
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 484 KVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTA 539
K+G S +++ ++ +GTSMA PHVSG+A L+ + HP+ S + +R+AL TA
Sbjct: 347 KLGQSTTVSNQGNQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATA 402
>pdb|1EA7|A Chain A, Sphericase
Length = 310
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 17/101 (16%)
Query: 450 VASFSARGPNPETPEIL----KPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGT 505
VA +S+RG + + ++ APG ++ + W + +N +SGT
Sbjct: 203 VADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGT 249
Query: 506 SMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRG 546
MA PHVSGLAA + A +P S +RS L A +VD +G
Sbjct: 250 XMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKG 290
>pdb|1BH6|A Chain A, Subtilisin Dy In Complex With The Synthetic Inhibitor N-
Benzyloxycarbonyl-Ala-Pro-Phe-Chloromethyl Ketone
Length = 274
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G E V+APG+++ + +P + L+GTSMA P
Sbjct: 186 ASFSSVGSELE--------VMAPGVSVYSTYPSNT-------------YTSLNGTSMASP 224
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + +P S + +R+ L +TA
Sbjct: 225 HVAGAAALILSKYPTLSASQVRNRLSSTA 253
>pdb|2Z30|A Chain A, Crystal Structure Of Complex Form Between
Mat-Tk-Subtilisin And Tk- Propeptide
Length = 320
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 213 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 249
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 250 PHVSGVVALIQAAY 263
>pdb|2Z56|A Chain A, Crystal Structure Of G56s-Propeptide:s324a-Subtilisin
Complex
pdb|2Z57|A Chain A, Crystal Structure Of G56e-Propeptide:s324a-Subtilisin
Complex
pdb|2Z58|A Chain A, Crystal Structure Of G56w-Propeptide:s324a-Subtilisin
Complex
Length = 318
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 211 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 247
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 248 PHVSGVVALIQAAY 261
>pdb|2ZRQ|A Chain A, Crystal Structure Of S324a-Subtilisin
pdb|3A3N|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Two C-Terminal Residues
pdb|3A3O|A Chain A, Crystal Structure Of Complex Between Sa-Subtilisin And Tk-
Propeptide With Deletion Of The Five C-Terminal Residues
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 222 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 258
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 259 PHVSGVVALIQAAY 272
>pdb|1SEL|A Chain A, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1SEL|B Chain B, Crystal Structure Of Selenosubtilisin At 2.0-Angstroms
Resolution
pdb|1AV7|A Chain A, Subtilisin Carlsberg L-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
pdb|1AVT|A Chain A, Subtilisin Carlsberg D-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|1VSB|A Chain A, Subtilisin Carlsberg L-Para-Chlorophenyl-1-Acetamido
Boronic Acid Inhibitor Complex
pdb|3VSB|A Chain A, Subtilisin Carlsberg D-Naphthyl-1-Acetamido Boronic Acid
Inhibitor Complex
Length = 274
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 21/89 (23%)
Query: 451 ASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACP 510
ASFS+ G E V+APG + + +P + L+GT MA P
Sbjct: 186 ASFSSVGAELE--------VMAPGAGVYSTYPTNT-------------YATLNGTXMASP 224
Query: 511 HVSGLAALLKAAHPDWSPAAIRSALMTTA 539
HV+G AAL+ + HP+ S + +R+ L +TA
Sbjct: 225 HVAGAAALILSKHPNLSASQVRNRLSSTA 253
>pdb|2E1P|A Chain A, Crystal Structure Of Pro-Tk-Subtilisin
Length = 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 327
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 328 PHVSGVVALIQAAY 341
>pdb|3A3P|A Chain A, Crystal Structure Of Complex Between E201aSA-Subtilisin
And Tk-Propeptide
Length = 329
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 222 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 258
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 259 PHVSGVVALIQAAY 272
>pdb|2Z2Z|A Chain A, Crystal Structure Of Unautoprocessed Form Of Tk-subtilisin
Soaked By 10mm Cacl2
Length = 395
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 288 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 324
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 325 PHVSGVVALIQAAY 338
>pdb|3VHQ|A Chain A, Crystal Structure Of The Ca6 Site Mutant Of
Pro-Sa-Subtilisin
Length = 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 327
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 328 PHVSGVVALIQAAY 341
>pdb|2ZWP|A Chain A, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
pdb|2ZWP|B Chain B, Crystal Structure Of Ca3 Site Mutant Of Pro-S324a
Length = 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 327
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 328 PHVSGVVALIQAAY 341
>pdb|2ZWO|A Chain A, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|B Chain B, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
pdb|2ZWO|C Chain C, Crystal Structure Of Ca2 Site Mutant Of Pro-S324a
Length = 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT+MA
Sbjct: 291 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTAMAT 327
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 328 PHVSGVVALIQAAY 341
>pdb|2B6N|A Chain A, The 1.8 A Crystal Structure Of A Proteinase K Like Enzyme
From A Psychrotroph Serratia Species
Length = 278
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D+ APG +I ++W + N +SGTSMA PHV+G+AAL +P+ SP
Sbjct: 198 DIYAPGSSITSSWY-----------TSNSATNTISGTSMASPHVAGVAALYLDENPNLSP 246
Query: 529 AAIRSALMTTA 539
A + + L T A
Sbjct: 247 AQVTNLLKTRA 257
>pdb|2Z2X|A Chain A, Crystal Structure Of Mature Form Of Tk-Subtilisin
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT MA
Sbjct: 211 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTXMAT 247
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 248 PHVSGVVALIQAAY 261
>pdb|2Z2Y|A Chain A, Crystal Structure Of Autoprocessed Form Of Tk-Subtilisin
pdb|2Z2Y|C Chain C, Crystal Structure Of Autoprocessed Form Of Tk-Subtilisin
Length = 318
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 23/74 (31%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
+ASFS R +P+V APG++IL+ +PD + L GT MA
Sbjct: 211 IASFSNR----------QPEVSAPGVDILSTYPDD-------------SYETLMGTCMAT 247
Query: 510 PHVSGLAALLKAAH 523
PHVSG+ AL++AA+
Sbjct: 248 PHVSGVVALIQAAY 261
>pdb|4DZT|A Chain A, Aqualysin I: The Crystal Structure Of A Serine Protease
From An Extreme Thermophile, Thermus Aquaticus Yt-1
Length = 276
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D+ APG +I +AW T L+GTSMA PHV+G+AAL +P +P
Sbjct: 196 DLFAPGASIPSAWYTS-----------DTATQTLNGTSMATPHVAGVAALYLEQNPSATP 244
Query: 529 AAIRSALMTTAYT 541
A++ SA++ A T
Sbjct: 245 ASVASAILNGATT 257
>pdb|2GKO|A Chain A, S41 Psychrophilic Protease
Length = 309
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 17/98 (17%)
Query: 450 VASFSARGPNPETPE--ILKPDV--IAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGT 505
VA FS+RG + I K DV APG + + W D + +SGT
Sbjct: 202 VADFSSRGHKRTAGDYVIQKGDVEISAPGAAVYSTWFDG-------------GYATISGT 248
Query: 506 SMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVD 543
SMA PH +GLAA + A P S +R L T A D
Sbjct: 249 SMASPHAAGLAAKIWAQSPAASNVDVRGELQTRASVND 286
>pdb|1WMD|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-Kp43 (1.30 Angstrom, 100 K)
pdb|1WME|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (1.50 Angstrom, 293 K)
Length = 434
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
VA FS+RGP + +KPDV+APG IL+A + P +++ + GTSMA
Sbjct: 202 VAQFSSRGPTKDGR--IKPDVMAPGTFILSA-RSSLAPDSSFWANHDSKYAYMGGTSMAT 258
Query: 510 PHVSGLAALLK 520
P V+G A L+
Sbjct: 259 PIVAGNVAQLR 269
>pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The
C5a Peptidase From Streptococcus Pyogenes (Scpa)
Length = 936
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 28/116 (24%)
Query: 466 LKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLK----A 521
+KPD+ APG +IL S + +K + LSGTSM+ P V+G+ LL+
Sbjct: 389 IKPDIAAPGQDIL---------SSVANNK----YAKLSGTSMSAPLVAGIMGLLQKQYET 435
Query: 522 AHPDWSPAA----IRSALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKA 573
+PD +P+ + LM++A + DE + GAG V +KA
Sbjct: 436 QYPDMTPSERLDLAKKVLMSSA-------TALYDEDEKAYFSPRQQGAGAVDAKKA 484
>pdb|1THM|A Chain A, Crystal Structure Of Thermitase At 1.4 Angstroms
Resolution
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 15/78 (19%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
DV APG +I + +P + + LSGTSMA PHV+G+A LL A S
Sbjct: 201 DVAAPGSSIYSTYP-------------TSTYASLSGTSMATPHVAGVAGLL--ASQGRSA 245
Query: 529 AAIRSALMTTAYTVDNRG 546
+ IR+A+ TA + G
Sbjct: 246 SNIRAAIENTADKISGTG 263
>pdb|1DBI|A Chain A, Crystal Structure Of A Thermostable Serine Protease
Length = 280
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 15/71 (21%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
DV+APG++I++ T R + +SGTSMA PHV+GLAALL A +
Sbjct: 202 DVVAPGVDIVST----------ITGNR---YAYMSGTSMASPHVAGLAALL--ASQGRNN 246
Query: 529 AAIRSALMTTA 539
IR A+ TA
Sbjct: 247 IEIRQAIEQTA 257
>pdb|3LPD|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 339
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 24/97 (24%)
Query: 449 VVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRK---TEFNILSGT 505
+ ASFS G + D+ APG +IL S + + R+ ++ ++GT
Sbjct: 233 IRASFSNYG--------VDVDLAAPGQDIL---------STVDSGTRRPVSDAYSFMAGT 275
Query: 506 SMACPHVSGLAALLKAA----HPDWSPAAIRSALMTT 538
SMA PHVSG+AAL+ +A + + +PA ++ L++T
Sbjct: 276 SMATPHVSGVAALVISAANSVNKNLTPAELKDVLVST 312
>pdb|3LPA|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 24/104 (23%)
Query: 449 VVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRK---TEFNILSGT 505
+ ASFS G + D+ APG +IL S + + R+ ++ ++GT
Sbjct: 233 IRASFSNYG--------VDVDLAAPGQDIL---------STVDSGTRRPVSDAYSFMAGT 275
Query: 506 SMACPHVSGLAALLKAA----HPDWSPAAIRSALMTTAYTVDNR 545
SMA PHVSG+AAL+ +A + + +PA ++ L++T + R
Sbjct: 276 SMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGR 319
>pdb|3LPC|A Chain A, Crystal Structure Of A Subtilisin-Like Protease
Length = 340
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 24/104 (23%)
Query: 449 VVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRK---TEFNILSGT 505
+ ASFS G + D+ APG +IL S + + R+ ++ ++GT
Sbjct: 233 IRASFSNYG--------VDVDLAAPGQDIL---------STVDSGTRRPVSDAYSFMAGT 275
Query: 506 SMACPHVSGLAALLKAA----HPDWSPAAIRSALMTTAYTVDNR 545
SMA PHVSG+AAL+ +A + + +PA ++ L++T + R
Sbjct: 276 SMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGR 319
>pdb|1WMF|A Chain A, Crystal Structure Of Alkaline Serine Protease Kp-43 From
Bacillus Sp. Ksm-kp43 (oxidized Form, 1.73 Angstrom)
Length = 434
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 450 VASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMAC 509
VA FS+RGP + +KPDV+APG IL+A + P +++ GTS A
Sbjct: 202 VAQFSSRGPTKDGR--IKPDVMAPGTFILSA-RSSLAPDSSFWANHDSKYAYXGGTSXAT 258
Query: 510 PHVSGLAALLK 520
P V+G A L+
Sbjct: 259 PIVAGNVAQLR 269
>pdb|1TEC|E Chain E, Crystallographic Refinement By Incorporation Of Molecular
Dynamics. The Thermostable Serine Protease Thermitase
Complexed With Eglin-C
pdb|2TEC|E Chain E, Molecular Dynamics Refinement Of A Thermitase-Eglin-C
Complex At 1.98 Angstroms Resolution And Comparison Of
Two Crystal Forms That Differ In Calcium Content
pdb|3TEC|E Chain E, Calcium Binding To Thermitase. Crystallographic Studies Of
Thermitase At 0, 5 And 100 Mm Calcium
Length = 279
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 15/78 (19%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
DV APG I + +P + + LSGTSMA PHV+G+A LL A S
Sbjct: 201 DVAAPGSWIYSTYP-------------TSTYASLSGTSMATPHVAGVAGLL--ASQGRSA 245
Query: 529 AAIRSALMTTAYTVDNRG 546
+ IR+A+ TA + G
Sbjct: 246 SNIRAAIENTADKISGTG 263
>pdb|1S2N|A Chain A, Crystal Strucure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1S2N|B Chain B, Crystal Strucure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1SH7|A Chain A, Crystal Structure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
pdb|1SH7|B Chain B, Crystal Structure Of A Cold Adapted Subtilisin-Like Serine
Proteinase
Length = 284
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 16/83 (19%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D+ APG I +AW D + +SGTSMA PHV+G+AAL + +P
Sbjct: 196 DLFAPGSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTP 242
Query: 529 AAIRSALMTTAY---TVDNRGET 548
+ L + A D RG T
Sbjct: 243 LQLTGLLNSRASENKVSDTRGTT 265
>pdb|3F7O|A Chain A, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
pdb|3F7O|B Chain B, Crystal Structure Of Cuticle-degrading Protease From
Paecilomyces Lilacinus (pl646)
Length = 284
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 13/51 (25%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL 519
D+ APG NIL+ W +G + N +SGTSMA PH+ GL A L
Sbjct: 203 DIFAPGSNILSTW---IGGT----------TNTISGTSMATPHIVGLGAYL 240
>pdb|1IC6|A Chain A, Structure Of A Serine Protease Proteinase K From
Tritirachium Album Limber At 0.98 A Resolution
pdb|1P7V|A Chain A, Structure Of A Complex Formed Between Proteinase K And A
Designed Heptapeptide Inhibitor Pro-Ala-Pro-Phe-Ala-Ala-
Ala At Atomic Resolution
pdb|1P7W|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Designed Heptapeptide Inhibitor
Pro-Ala-Pro-Phe-Ala-Ser-Ala At Atomic Resolution
pdb|2HD4|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Octapeptide Gly-Asp-Glu-Gln-Gly-Glu-Asn-Lys
At 2.15 A Resolution
pdb|2DQK|A Chain A, Crystal Structure Of The Complex Of Proteinase K With A
Specific Lactoferrin Peptide Val-Leu-Leu-His At 1.93 A
Resolution
pdb|2HPZ|A Chain A, Crystal Structure Of Proteinase K Complex With A Synthetic
Peptide Klkllvvirlk At 1.69 A Resolution
pdb|2DUJ|A Chain A, Crystal Structure Of The Complex Formed Between Proteinase
K And A Synthetic Peptide Leu-Leu-Phe-Asn-Asp At 1.67 A
Resolution
pdb|2ID8|A Chain A, Crystal Structure Of Proteinase K
pdb|2G4V|A Chain A, Anomalous Substructure Of Proteinase K
pdb|2PQ2|A Chain A, Structure Of Serine Proteinase K Complex With A Highly
Flexible Hydrophobic Peptide At 1.8a Resolution
pdb|2PWA|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Alanine Boronic Acid At 0.83a Resolution
pdb|2PWB|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Coumarin At 1.9 A Resolution
pdb|2PYZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With
Auramine At 1.8a Resolution
pdb|2V8B|A Chain A, Sad Structure Solution Of Proteinase K Grown In Selenate
Solution
pdb|3DYB|A Chain A, Proteinase K- Digalacturonic Acid Complex
pdb|3GT3|A Chain A, Structure Of Proteinase K With The Mad Triangle B3c
pdb|3GT4|A Chain A, Structure Of Proteinase K With The Magic Triangle I3c
pdb|3OSZ|A Chain A, Crystal Structure Of The Complex Of Proteinase K With An
Antimicrobial Nonapeptide, At 2.26 A Resolution
pdb|3L1K|A Chain A, Sad Structure Solution Of Proteinase K Grown In Potassium
Tellurate Solution
pdb|3AJ8|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
H2o Solution Using Peg 8000
pdb|3AJ9|A Chain A, X-Ray Analysis Of Crystal Of Proteinase K Obtained From
D2o Solution Using Peg 8000
pdb|3Q40|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution.
pdb|3Q5G|A Chain A, Sulphur Sad Structure Solution Of Proteinase K Grown In
So4 Solution
pdb|3QMP|A Chain A, Selenium Sad Structure Solution Of Proteinase K Grown In
So4-Less Solution And Soaked In Selenate.
pdb|4B5L|A Chain A, The 1.6 A High Energy Room Temperature Structure Of
Proteinase K At 38.4 Kev And 0.04 Mgy
pdb|4FON|A Chain A, High Energy Remote Sad Structure Solution Of Proteinase K
From The 37.8 Kev Tellurium K Edge
Length = 279
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D+ PG +IL+ W I R +SGTSMA PHV+GLAA L +
Sbjct: 200 DIFGPGTDILSTW--------IGGSTRS-----ISGTSMATPHVAGLAAYLMTLGKTTAA 246
Query: 529 AAIR 532
+A R
Sbjct: 247 SACR 250
>pdb|1PEK|E Chain E, Structure Of The Complex Of Proteinase K With A
Substrate-analogue Hexa-peptide Inhibitor At 2.2
Angstroms Resolution
pdb|1HT3|A Chain A, Mercury Induced Modifications In The Stereochemistry Of
The Active Site Through Cys-73 In A Serine Protease:
Crystal Structure Of The Complex Of A Partially Modified
Proteinase K With Mercury At 1.8 A Resolution
pdb|1PFG|A Chain A, Strategy To Design Inhibitors: Structure Of A Complex Of
Proteinase K With A Designed Octapeptide Inhibitor
N-Ac-Pro-Ala-Pro-Phe-Dala-Ala- Ala-Ala-Nh2 At 2.5a
Resolution
Length = 279
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D+ PG +IL+ W I R +SGTSMA PHV+GLAA L +
Sbjct: 200 DIFGPGTSILSTW--------IGGSTRS-----ISGTSMATPHVAGLAAYLMTLGKTTAA 246
Query: 529 AAIR 532
+A R
Sbjct: 247 SACR 250
>pdb|3PRK|E Chain E, Inhibition Of Proteinase K By
Methoxysuccinyl-Ala-Ala-Pro-Ala- Chloromethyl Ketone. An
X-Ray Study At 2.2-Angstroms Resolution
pdb|1BJR|E Chain E, Complex Formed Between Proteolytically Generated
Lactoferrin Fragment And Proteinase K
pdb|1CNM|A Chain A, Enhancement Of Catalytic Efficiency Of Proteinase K
Through Exposure To Anhydrous Organic Solvent At 70
Degrees Celsius
pdb|1EGQ|A Chain A, Enhancement Of Enzyme Activity Through Three-Phase
Partitioning: Crystal Structure Of A Modified Serine
Proteinase At 1.5 A Resolution
pdb|1OYO|A Chain A, Regulation Of Protease Activity By Melanin: Crystal
Structure Of The Complex Formed Between Proteinase K And
Melanin Monomers At 2.0 Resolution
pdb|1PJ8|A Chain A, Structure Of A Ternary Complex Of Proteinase K, Mercury
And A Substrate-Analogue Hexapeptide At 2.2 A Resolution
pdb|2DP4|E Chain E, Crystal Structure Of The Complex Formed Between Proteinase
K And A Human Lactoferrin Fragment At 2.9 A Resolution
pdb|1PTK|A Chain A, Studies On The Inhibitory Action Of Mercury Upon
Proteinase K
pdb|2PKC|A Chain A, Crystal Structure Of Calcium-Free Proteinase K At 1.5
Angstroms Resolution
pdb|2PRK|A Chain A, Synchrotron X-Ray Data Collection And Restrained Least-
Squares Refinement Of The Crystal Structure Of
Proteinase K At 1.5 Angstroms Resolution
pdb|3D9Q|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dose On Esrf Id23-1 Beamline
pdb|3DDZ|X Chain X, Proteinase K By Lb Nanotemplate Method After The First
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE0|X Chain X, Proteinase K By Lb Nanotemplate Method After The Second
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE1|X Chain X, Proteinase K By Lb Nanotemplate Method After The Third
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE2|X Chain X, Proteinase K By Lb Nanotemplate Method After The Fourth
Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE3|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X- Ray Dose On Esrf Id23-1 Beamline
pdb|3DE4|X Chain X, Proteinase K By Classical Hanging Drop Method After The
First Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE5|X Chain X, Roteinase K By Classical Hanging Drop Method After The
Second Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE6|X Chain X, Proteinase K By Classical Hanging Drop Method After The
Third Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DE7|X Chain X, Proteinase K By Classical Hanging Drop Method After The
Fourth Step Of High X-Ray Dose On Esrf Id23-1 Beamline
pdb|3DVQ|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dose On Esrf Id14-2 Beamline
pdb|3DVR|X Chain X, Proteinase K By Lb Nanotemplate Method After The First
Step Of High X-Ray Dose On Esrf Id14-2 Beamline
pdb|3DVS|X Chain X, Proteinase K By Lb Nanotmplate Method After The Second
Step Of High Dose On Esrf Id14-2 Beamline
pdb|3DW1|X Chain X, Proteinase K By Lb Nanotemplate Method After The Third
Step High X-Ray Dose On Esrf Id14-2 Beamline
pdb|3DW3|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X Ray Dose On Esrf Id 14-2 Beamline
pdb|3DWE|X Chain X, Proteinase K By Classical Hanging Drop Method After High
X- Ray Dose On Esrf Id14-2 Beamline
pdb|3I2Y|X Chain X, Proteinase K By Classical Hanging Drop Method Before High
X- On Id14-2 Beamline At Esrf
pdb|3I30|X Chain X, Proteinase K By Classical Hanging Drop Method After High
X-R Id14-2 Beamline At Esrf
pdb|3I37|X Chain X, Proteinase K By Lb Nanotemplate Method Before High X-Ray
Dos 2 Beamline At Esrf
pdb|3I34|X Chain X, Proteinase K By Lb Nanotemplate Method After High X-Ray
Dose On Id14-2 Beamline At Esrf
pdb|3PTL|A Chain A, Crystal Structure Of Proteinase K Inhibited By A
Lactoferrin Nonapeptide,
Lys-Gly-Glu-Ala-Asp-Ala-Leu-Ser-Leu-Asp At 1.3 A
Resolution.
pdb|4DJ5|X Chain X, Proteinase K By Langmuir-Blodgett Hanging Drop Method At
1.8a Resolution For Unique Water Distribution
Length = 279
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 13/64 (20%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSP 528
D+ PG +IL+ W I R +SGTSMA PHV+GLAA L +
Sbjct: 200 DIFGPGTSILSTW--------IGGSTRS-----ISGTSMATPHVAGLAAYLMTLGKTTAA 246
Query: 529 AAIR 532
+A R
Sbjct: 247 SACR 250
>pdb|1XF1|A Chain A, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
pdb|1XF1|B Chain B, Structure Of C5a Peptidase- A Key Virulence Factor From
Streptococcus
Length = 926
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 48/109 (44%), Gaps = 14/109 (12%)
Query: 466 LKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPD 525
+KPD+ APG +IL S + +K + LSGTS + P V+G+ LL+ +
Sbjct: 380 IKPDIAAPGQDIL---------SSVANNK----YAKLSGTSXSAPLVAGIXGLLQKQYET 426
Query: 526 WSPAAIRSALMTTAYTVDNRGET-MIDESTGNTSTALDFGAGHVHPQKA 573
P S + A V T + DE + GAG V +KA
Sbjct: 427 QYPDXTPSERLDLAKKVLXSSATALYDEDEKAYFSPRQQGAGAVDAKKA 475
>pdb|3HJR|A Chain A, Crystal Structure Of Serine Protease Of Aeromonas Sobria
Length = 600
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 501 ILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTA 560
+++GTS A P SG ALL +A+PD S +R L +A VD + + ++ T +T
Sbjct: 331 VMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKV 390
Query: 561 LD 562
D
Sbjct: 391 RD 392
>pdb|3F7M|A Chain A, Crystal Structure Of Apo Cuticle-Degrading Protease
(Ver112) From Verticillium Psalliotae
Length = 279
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 13/51 (25%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL 519
D+ APG +I + W +G N +SGTSMA PH++GLAA L
Sbjct: 201 DIFAPGTSITSTW---IGG----------RTNTISGTSMATPHIAGLAAYL 238
>pdb|3TI9|A Chain A, Crystal Structure Of The Basic Protease Bprb From The
Ovine Footrot Pathogen, Dichelobacter Nodosus
Length = 352
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 470 VIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAA 522
+ APG NIL+ VG +G P ++ + + +GTSMA PHVSG+AAL+ +A
Sbjct: 247 LAAPGTNILSTI--DVGQAG-PV---RSSYGMKAGTSMAAPHVSGVAALVISA 293
>pdb|3TI7|A Chain A, Crystal Structure Of The Basic Protease Bprv From The
Ovine Footrot Pathogen, Dichelobacter Nodosus
Length = 352
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 6/53 (11%)
Query: 470 VIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAA 522
+ APG NIL+ VG +G P ++ + + +GTSMA PHVSG+AAL+ +A
Sbjct: 247 LAAPGTNILSTI--DVGQAG-PV---RSSYGMKAGTSMAAPHVSGVAALVISA 293
>pdb|4H6V|A Chain A, Structure Of Patellamide Maturation Protease Pata
Length = 306
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 21/81 (25%)
Query: 470 VIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL------KAAH 523
++APG +IL A P G T++ LSGTS A P VSG+AALL +
Sbjct: 198 ILAPGEDILGAKP------GGGTER-------LSGTSFATPIVSGVAALLLSEQVRRGET 244
Query: 524 PDWSPAAIRSALMTTAYTVDN 544
PD P +R L+ +A D+
Sbjct: 245 PD--PQKVRQLLLQSALPCDD 263
>pdb|3ZXX|A Chain A, Structure Of Self-cleaved Protease Domain Of Pata
Length = 307
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 21/81 (25%)
Query: 470 VIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL------KAAH 523
++APG +IL A P G T++ LSGTS A P VSG+AALL +
Sbjct: 207 ILAPGEDILGAKP------GGGTER-------LSGTSFATPIVSGVAALLLSEQVRRGET 253
Query: 524 PDWSPAAIRSALMTTAYTVDN 544
PD P +R L+ +A D+
Sbjct: 254 PD--PQKVRQLLLQSALPCDD 272
>pdb|4AKS|A Chain A, Patg Macrocyclase Domain
pdb|4AKS|B Chain B, Patg Macrocyclase Domain
Length = 360
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 467 KPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDW 526
K ++APG IL A P P L+GTSMA P ++G++ALL +
Sbjct: 265 KEGILAPGEEILGAQPCTEEPVR------------LTGTSMAAPVMTGISALLMSLQVQQ 312
Query: 527 ----SPAAIRSALMTTAYTVD 543
A+R+AL+ TA D
Sbjct: 313 GKPVDAEAVRTALLKTAIPCD 333
>pdb|4AKT|A Chain A, Patg Macrocyclase In Complex With Peptide
pdb|4AKT|B Chain B, Patg Macrocyclase In Complex With Peptide
Length = 360
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 467 KPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDW 526
K ++APG IL A P P L+GTSMA P ++G++ALL +
Sbjct: 265 KEGILAPGEEILGAQPCTEEPVR------------LTGTSMAAPVMTGISALLMSLQVQQ 312
Query: 527 ----SPAAIRSALMTTAYTVD 543
A+R+AL+ TA D
Sbjct: 313 GKPVDAEAVRTALLKTAIPCD 333
>pdb|4H6X|A Chain A, Structure Of Patellamide Maturation Protease Patg
pdb|4H6X|B Chain B, Structure Of Patellamide Maturation Protease Patg
Length = 357
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 467 KPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDW 526
K ++APG IL A P P L+GTSMA P ++G++ALL +
Sbjct: 247 KEGILAPGEEILGAQPCTEEPVR------------LTGTSMAAPVMTGISALLMSLQVQQ 294
Query: 527 ----SPAAIRSALMTTAYTVD 543
A+R+AL+ TA D
Sbjct: 295 GKPVDAEAVRTALLKTAIPCD 315
>pdb|3ZXY|A Chain A, Structure Of S218a Mutant Of The Protease Domain Of Pata
Length = 282
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 21/81 (25%)
Query: 470 VIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL------KAAH 523
++APG +IL A P G T++ LSGT+ A P VSG+AALL +
Sbjct: 188 ILAPGEDILGAKP------GGGTER-------LSGTAFATPIVSGVAALLLSEQVRRGET 234
Query: 524 PDWSPAAIRSALMTTAYTVDN 544
PD P +R L+ +A D+
Sbjct: 235 PD--PQKVRQLLLQSALPCDD 253
>pdb|3LXU|X Chain X, Crystal Structure Of Tripeptidyl Peptidase 2 (Tpp Ii)
Length = 1354
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 500 NILSGTSMACPHVSGLAAL----LKAAHPDWSPAAIRSALMTTA 539
+ +GTS A PHV+G AL LK + ++SP +I+ A+ TA
Sbjct: 456 QLXNGTSXAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTA 499
>pdb|2X8J|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 13/51 (25%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL 519
D++APG+ I + + D + + LSGT+MA PHV+G AL+
Sbjct: 226 DIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALI 263
>pdb|2X8J|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2X8J|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 327
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 13/51 (25%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL 519
D++APG+ I + + D + + LSGT+MA PHV+G AL+
Sbjct: 226 DIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALI 263
>pdb|2WV7|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WV7|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|A Chain A, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|B Chain B, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|C Chain C, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|D Chain D, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|E Chain E, Intracellular Subtilisin Precursor From B. Clausii
pdb|2WWT|F Chain F, Intracellular Subtilisin Precursor From B. Clausii
Length = 329
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 13/51 (25%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL 519
D++APG+ I + + D + + LSGT+MA PHV+G AL+
Sbjct: 226 DIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALI 263
>pdb|2XRM|A Chain A, Processed Intracellular Subtilisin From B. Clausii
Length = 311
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 13/51 (25%)
Query: 469 DVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL 519
D++APG+ I + + D + + LSGT+MA PHV+G AL+
Sbjct: 208 DIVAPGVGIKSTYLD-------------SGYAELSGTAMAAPHVAGALALI 245
>pdb|1SFD|A Chain A, Oxidized Form Of Amicyanin Mutant P94f
pdb|1SFD|B Chain B, Oxidized Form Of Amicyanin Mutant P94f
pdb|1SFH|A Chain A, Reduced State Of Amicyanin Mutant P94f
pdb|1SFH|B Chain B, Reduced State Of Amicyanin Mutant P94f
Length = 105
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 295 IDRD-FPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDP 353
I+R+ P +VH G + G + GP +KK+Q YSL + + + D + + P
Sbjct: 46 INREAMPHNVHFVAG--VLGEAALKGPMMKKEQAYSLTFTEAGTYDYHC-------TFHP 96
Query: 354 AFVRGKIVV 362
F+RGK+VV
Sbjct: 97 -FMRGKVVV 104
>pdb|4H6W|A Chain A, Structure Of Prenylagaramide Maturation Protease Paga
pdb|4H6W|B Chain B, Structure Of Prenylagaramide Maturation Protease Paga
Length = 306
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 21/79 (26%)
Query: 467 KPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALL------K 520
K ++APG +IL A P+ G LSGTS A P VSG+AALL +
Sbjct: 198 KQGILAPGKDILGAKPN----GGTIR---------LSGTSFATPIVSGVAALLLSLQIKR 244
Query: 521 AAHPDWSPAAIRSALMTTA 539
PD P +++AL+ +A
Sbjct: 245 GEKPD--PQKVKNALLASA 261
>pdb|1SF3|A Chain A, Structure Of The Reduced Form Of The P94a Mutant Of
Amicyanin
Length = 105
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 295 IDRD-FPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDP 353
I+R+ P +VH G + G + GP +KK+Q YSL + + + D + +
Sbjct: 46 INREAMPHNVHFVAG--VLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTA--------H 95
Query: 354 AFVRGKIVV 362
F+RGK+VV
Sbjct: 96 PFMRGKVVV 104
>pdb|3PLY|A Chain A, Structure Of Oxidized P96g Mutant Of Amicyanin
pdb|3PLY|B Chain B, Structure Of Oxidized P96g Mutant Of Amicyanin
pdb|3PLY|C Chain C, Structure Of Oxidized P96g Mutant Of Amicyanin
pdb|3PLY|D Chain D, Structure Of Oxidized P96g Mutant Of Amicyanin
Length = 105
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 11/69 (15%)
Query: 295 IDRD-FPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDP 353
I+R+ P +VH G + G + GP +KK+Q YSL + +E+G Y G
Sbjct: 46 INREAMPHNVHFVAG--VLGEAALKGPMMKKEQAYSLTF--TEAGT-YDYHCTPHG---- 96
Query: 354 AFVRGKIVV 362
F+RGK+VV
Sbjct: 97 -FMRGKVVV 104
>pdb|1SF5|A Chain A, Structure Of Oxidized State Of The P94a Mutant Of
Amicyanin
Length = 105
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 11/69 (15%)
Query: 295 IDRD-FPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDP 353
I+R+ P +VH G + G + GP +KK+Q YSL + + + D + +
Sbjct: 46 INREAXPHNVHFVAG--VLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTA--------H 95
Query: 354 AFVRGKIVV 362
F+RGK+VV
Sbjct: 96 PFMRGKVVV 104
>pdb|3IE9|A Chain A, Structure Of Oxidized M98l Mutant Of Amicyanin
pdb|3IEA|A Chain A, Structure Of Reduced M98l Mutant Of Amicyanin
Length = 105
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 295 IDRD-FPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDP 353
I+R+ P +VH G + G + GP +KK+Q YSL + + + D +
Sbjct: 46 INREAMPHNVHFVAG--VLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPH-------- 95
Query: 354 AFVRGKIVV 362
F+RGK+VV
Sbjct: 96 PFLRGKVVV 104
>pdb|1MDA|A Chain A, Crystal Structure Of An Electron-Transfer Complex Between
Methylamine Dehydrogenase And Amicyanin
pdb|1MDA|B Chain B, Crystal Structure Of An Electron-Transfer Complex Between
Methylamine Dehydrogenase And Amicyanin
Length = 103
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 295 IDRD-FPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDP 353
I+R+ P +VH G + G + GP +KK+Q YSL + + + D +
Sbjct: 44 INREAMPHNVHFVAGVL--GEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPH-------- 93
Query: 354 AFVRGKIVV 362
F+RGK+VV
Sbjct: 94 PFMRGKVVV 102
>pdb|2MTA|A Chain A, Crystal Structure Of A Ternary Electron Transfer Complex
Between Methylamine Dehydrogenase, Amicyanin And A
C-Type Cytochrome
pdb|1BXA|A Chain A, Amicyanin Reduced, Ph 4.4, 1.3 Angstroms
pdb|2RAC|A Chain A, Amicyanin Reduced, Ph 7.7, 1.3 Angstroms
pdb|1MG2|C Chain C, Mutation Of Alpha Phe55 Of Methylamine Dehydrogenase
Alters The Reorganization Energy And Electronic Coupling
For Its Electron Transfer Reaction With Amicyanin
pdb|1MG2|G Chain G, Mutation Of Alpha Phe55 Of Methylamine Dehydrogenase
Alters The Reorganization Energy And Electronic Coupling
For Its Electron Transfer Reaction With Amicyanin
pdb|1MG2|K Chain K, Mutation Of Alpha Phe55 Of Methylamine Dehydrogenase
Alters The Reorganization Energy And Electronic Coupling
For Its Electron Transfer Reaction With Amicyanin
pdb|1MG2|O Chain O, Mutation Of Alpha Phe55 Of Methylamine Dehydrogenase
Alters The Reorganization Energy And Electronic Coupling
For Its Electron Transfer Reaction With Amicyanin
pdb|1MG3|C Chain C, Mutation Of Alpha Phe55 Of Methylamine Dehydrogenase
Alters The Reorganization Energy And Electronic Coupling
For Its Electron Transfer Reaction With Amicyanin
pdb|1MG3|G Chain G, Mutation Of Alpha Phe55 Of Methylamine Dehydrogenase
Alters The Reorganization Energy And Electronic Coupling
For Its Electron Transfer Reaction With Amicyanin
pdb|1MG3|K Chain K, Mutation Of Alpha Phe55 Of Methylamine Dehydrogenase
Alters The Reorganization Energy And Electronic Coupling
For Its Electron Transfer Reaction With Amicyanin
pdb|1MG3|O Chain O, Mutation Of Alpha Phe55 Of Methylamine Dehydrogenase
Alters The Reorganization Energy And Electronic Coupling
For Its Electron Transfer Reaction With Amicyanin
pdb|1T5K|A Chain A, Crystal Structure Of Amicyanin Substituted With Cobalt
pdb|1T5K|B Chain B, Crystal Structure Of Amicyanin Substituted With Cobalt
pdb|1T5K|C Chain C, Crystal Structure Of Amicyanin Substituted With Cobalt
pdb|1T5K|D Chain D, Crystal Structure Of Amicyanin Substituted With Cobalt
pdb|2GC4|C Chain C, Structural Comparison Of The Oxidized Ternary Electron
Transfer Complex Of Methylamine Dehydrogenase, Amicyanin
And Cytochrome C551i From Paracoccus Denitrificans With
The Substrate-Reduced, Copper Free Complex At 1.9 A
Resolution.
pdb|2GC4|G Chain G, Structural Comparison Of The Oxidized Ternary Electron
Transfer Complex Of Methylamine Dehydrogenase, Amicyanin
And Cytochrome C551i From Paracoccus Denitrificans With
The Substrate-Reduced, Copper Free Complex At 1.9 A
Resolution.
pdb|2GC4|K Chain K, Structural Comparison Of The Oxidized Ternary Electron
Transfer Complex Of Methylamine Dehydrogenase, Amicyanin
And Cytochrome C551i From Paracoccus Denitrificans With
The Substrate-Reduced, Copper Free Complex At 1.9 A
Resolution.
pdb|2GC4|O Chain O, Structural Comparison Of The Oxidized Ternary Electron
Transfer Complex Of Methylamine Dehydrogenase, Amicyanin
And Cytochrome C551i From Paracoccus Denitrificans With
The Substrate-Reduced, Copper Free Complex At 1.9 A
Resolution.
pdb|2GC7|C Chain C, Substrate Reduced, Copper Free Complex Of Methylamine
Dehydrogenase, Amicyanin And Cytochrome C551i From
Paracoccus Denitrificans.
pdb|2GC7|G Chain G, Substrate Reduced, Copper Free Complex Of Methylamine
Dehydrogenase, Amicyanin And Cytochrome C551i From
Paracoccus Denitrificans.
pdb|2GC7|K Chain K, Substrate Reduced, Copper Free Complex Of Methylamine
Dehydrogenase, Amicyanin And Cytochrome C551i From
Paracoccus Denitrificans.
pdb|2GC7|O Chain O, Substrate Reduced, Copper Free Complex Of Methylamine
Dehydrogenase, Amicyanin And Cytochrome C551i From
Paracoccus Denitrificans.
pdb|2J55|A Chain A, X-Ray Reduced Paraccocus Denitrificans Methylamine
Dehydrogenase O-Quinone In Complex With Amicyanin.
pdb|2J55|B Chain B, X-Ray Reduced Paraccocus Denitrificans Methylamine
Dehydrogenase O-Quinone In Complex With Amicyanin.
pdb|2J56|A Chain A, X-Ray Reduced Paraccocus Denitrificans Methylamine
Dehydrogenase N-Semiquinone In Complex With Amicyanin.
pdb|2J56|B Chain B, X-Ray Reduced Paraccocus Denitrificans Methylamine
Dehydrogenase N-Semiquinone In Complex With Amicyanin.
pdb|2J57|A Chain A, X-Ray Reduced Paraccocus Denitrificans Methylamine
Dehydrogenase N-Quinol In Complex With Amicyanin.
pdb|2J57|B Chain B, X-Ray Reduced Paraccocus Denitrificans Methylamine
Dehydrogenase N-Quinol In Complex With Amicyanin.
pdb|2J57|C Chain C, X-Ray Reduced Paraccocus Denitrificans Methylamine
Dehydrogenase N-Quinol In Complex With Amicyanin.
pdb|2J57|D Chain D, X-Ray Reduced Paraccocus Denitrificans Methylamine
Dehydrogenase N-Quinol In Complex With Amicyanin.
pdb|1AAC|A Chain A, Amicyanin Oxidized, 1.31 Angstroms
pdb|1AAJ|A Chain A, Crystal Structure Analysis Of Amicyanin And Apoamicyanin
From Paracoccus Denitrificans At 2.0 Angstroms And 1.8
Angstroms Resolution
pdb|1AAN|A Chain A, Crystal Structure Analysis Of Amicyanin And Apoamicyanin
From Paracoccus Denitrificans At 2.0 Angstroms And 1.8
Angstroms Resolution
pdb|2OV0|A Chain A, Structure Of The Blue Copper Protein Amicyanin To 0.75 A
Resolution
pdb|3L45|A Chain A, A Joint Neutron And X-Ray Structure Of Oxidized Amicyanin
Length = 105
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 11/69 (15%)
Query: 295 IDRD-FPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDP 353
I+R+ P +VH G + G + GP +KK+Q YSL + + + D +
Sbjct: 46 INREAMPHNVHFVAG--VLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPH-------- 95
Query: 354 AFVRGKIVV 362
F+RGK+VV
Sbjct: 96 PFMRGKVVV 104
>pdb|2IDQ|A Chain A, Structure Of M98a Mutant Of Amicyanin, Cu(Ii)
pdb|2IDS|A Chain A, Structure Of M98a Mutant Of Amicyanin, Cu(I)
Length = 105
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 295 IDRD-FPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDP 353
I+R+ P +VH G + G + GP +KK+Q YSL + + + D +
Sbjct: 46 INREAMPHNVHFVAG--VLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPH-------- 95
Query: 354 AFVRGKIVV 362
F RGK+VV
Sbjct: 96 PFARGKVVV 104
>pdb|2QDV|A Chain A, Structure Of The Cu(Ii) Form Of The M51a Mutant Of
Amicyanin
pdb|2QDW|A Chain A, Structure Of Cu(I) Form Of The M51a Mutant Of Amicyanin
Length = 106
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 300 PADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGK 359
P +VH G + G + GP +KK+Q YSL + + + D + F+RGK
Sbjct: 53 PHNVHFVAG--VLGEAALKGPMMKKEQAYSLTFTEAGTYDYHCTPH--------PFMRGK 102
Query: 360 IVV 362
+VV
Sbjct: 103 VVV 105
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,002,419
Number of Sequences: 62578
Number of extensions: 867621
Number of successful extensions: 1913
Number of sequences better than 100.0: 120
Number of HSP's better than 100.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1642
Number of HSP's gapped (non-prelim): 248
length of query: 732
length of database: 14,973,337
effective HSP length: 106
effective length of query: 626
effective length of database: 8,340,069
effective search space: 5220883194
effective search space used: 5220883194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)