Query 040458
Match_columns 732
No_of_seqs 423 out of 2996
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 13:47:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040458.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040458hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 6E-120 2E-124 1045.5 45.5 589 108-729 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 9E-108 3E-112 946.6 47.8 569 108-728 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 2.2E-78 7.6E-83 728.3 37.3 500 124-730 6-607 (926)
4 3afg_A Subtilisin-like serine 100.0 6.7E-55 2.3E-59 495.2 26.8 326 32-577 35-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 7.8E-53 2.7E-57 463.3 16.3 307 32-576 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 3E-51 1E-55 462.0 20.1 324 32-577 44-466 (471)
7 2p4e_P Proprotein convertase s 100.0 2.3E-52 7.8E-57 476.5 5.2 305 31-542 74-422 (692)
8 1y9z_A Alkaline serine proteas 100.0 2.5E-50 8.5E-55 449.6 17.3 353 113-597 4-437 (441)
9 1r6v_A Subtilisin-like serine 100.0 8.3E-50 2.8E-54 458.5 20.2 341 27-587 26-450 (671)
10 1r0r_E Subtilisin carlsberg; h 100.0 1.2E-45 4.1E-50 386.0 14.2 228 114-575 5-274 (274)
11 1gci_A Subtilisin; hydrolase, 100.0 1.5E-45 5.2E-50 383.8 14.7 227 114-575 5-269 (269)
12 4h6x_A Thiazoline oxidase/subt 100.0 2.4E-47 8.1E-52 413.8 0.7 271 124-575 20-337 (357)
13 1to2_E Subtilisin BPN'; serine 100.0 2.3E-45 8E-50 385.0 14.4 230 114-576 5-276 (281)
14 1dbi_A AK.1 serine protease; h 100.0 5.4E-45 1.9E-49 382.0 17.1 230 113-575 11-279 (280)
15 2x8j_A Intracellular subtilisi 100.0 3.2E-45 1.1E-49 392.2 13.6 238 111-575 19-310 (327)
16 1thm_A Thermitase; hydrolase(s 100.0 2.6E-44 8.7E-49 376.9 15.2 229 113-575 11-278 (279)
17 2ixt_A 36KDA protease; serine 100.0 3E-43 1E-47 375.1 18.1 253 113-570 6-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 3.3E-44 1.1E-48 377.3 10.0 228 131-575 3-274 (282)
19 3lxu_X Tripeptidyl-peptidase 2 100.0 3.3E-43 1.1E-47 419.6 19.7 322 211-730 267-654 (1354)
20 2iy9_A SUBA; toxin, shiga, pla 100.0 3.7E-44 1.3E-48 388.1 10.3 249 112-576 22-329 (347)
21 2z30_A TK-subtilisin; thermoco 100.0 6.6E-44 2.2E-48 381.4 11.4 237 113-576 8-317 (320)
22 4h6w_A N-terminal cyanobactin 100.0 1.2E-43 4E-48 377.7 10.6 235 124-575 10-287 (306)
23 1wmd_A Protease; alpha-beta hy 100.0 9.5E-43 3.3E-47 388.1 16.3 256 125-577 11-319 (434)
24 2oxa_A Extracellular serine pr 100.0 2E-41 6.9E-46 391.7 22.2 130 446-583 263-432 (600)
25 1sh7_A Extracellular subtilisi 100.0 1.4E-41 4.9E-46 356.4 18.1 216 112-543 3-257 (284)
26 3lpc_A APRB2; protease, subtil 100.0 3.6E-42 1.2E-46 371.7 12.6 262 124-577 21-338 (340)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 2.8E-41 9.5E-46 353.7 15.8 217 111-543 4-259 (276)
28 2b6n_A Proteinase K; S binding 100.0 4.1E-41 1.4E-45 352.4 15.8 217 113-543 6-261 (278)
29 2pwa_A Proteinase K; structure 100.0 3.7E-41 1.3E-45 352.3 13.0 224 111-571 4-272 (279)
30 1p8j_A Furin precursor; prohor 100.0 6.5E-40 2.2E-44 368.3 21.2 270 112-579 12-333 (471)
31 2qtw_B Proprotein convertase s 100.0 1.4E-39 4.9E-44 362.1 16.0 257 114-575 3-313 (546)
32 2id4_A Kexin; KEX2, kexin, fur 100.0 1.4E-39 4.8E-44 368.0 15.1 258 113-578 27-344 (503)
33 3f7m_A Alkaline serine proteas 100.0 1.8E-39 6.2E-44 340.5 11.7 196 127-543 25-261 (279)
34 3hjr_A Extracellular serine pr 100.0 6.1E-37 2.1E-41 355.4 25.1 126 445-579 262-428 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.8 3.6E-20 1.2E-24 210.0 5.7 68 228-295 302-383 (552)
36 1ga6_A Serine-carboxyl protein 99.7 3.1E-17 1E-21 177.2 5.3 68 228-295 121-206 (372)
37 2w2n_P Proprotein convertase s 99.2 1.9E-11 6.4E-16 108.9 5.1 79 28-106 33-113 (114)
38 3cnq_P Subtilisin BPN'; unclea 99.1 1.2E-10 4E-15 97.1 8.0 75 29-110 5-79 (80)
39 2qtw_A Proprotein convertase s 99.0 2.6E-10 9E-15 102.6 5.2 79 28-106 43-123 (124)
40 3edy_A Tripeptidyl-peptidase 1 98.9 1.5E-09 5.2E-14 122.1 7.9 66 230-295 296-374 (544)
41 1v5i_B POIA1, IA-1=serine prot 98.8 8.9E-09 3E-13 84.5 5.9 70 33-106 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.6 2.5E-07 8.5E-12 89.3 11.3 93 342-438 82-186 (194)
43 2z30_B TK-subtilisin; thermoco 98.0 8.2E-06 2.8E-10 64.5 5.9 63 33-106 2-64 (65)
44 2ek8_A Aminopeptidase; metallo 96.5 0.008 2.7E-07 65.8 10.4 88 325-422 92-182 (421)
45 2ys4_A Hydrocephalus-inducing 95.2 0.053 1.8E-06 48.1 8.0 73 640-724 41-114 (122)
46 3iib_A Peptidase M28; YP_92679 95.0 0.069 2.4E-06 58.7 9.9 101 325-438 105-226 (444)
47 3kas_A Transferrin receptor pr 94.6 0.038 1.3E-06 63.2 6.5 68 354-421 128-229 (640)
48 3fed_A Glutamate carboxypeptid 94.2 0.042 1.4E-06 63.6 5.8 69 354-422 151-267 (707)
49 3qbt_B Inositol polyphosphate 90.5 1.3 4.3E-05 40.2 9.5 88 641-730 44-139 (140)
50 3lxu_X Tripeptidyl-peptidase 2 89.6 0.25 8.4E-06 60.4 5.0 25 131-155 32-56 (1354)
51 1y9z_A Alkaline serine proteas 89.0 0.26 8.8E-06 54.0 4.3 33 444-484 180-212 (441)
52 2e6j_A Hydin protein; PAPD, st 85.3 0.64 2.2E-05 40.1 3.8 55 641-696 27-82 (112)
53 2r39_A FIXG-related protein; s 85.2 3.8 0.00013 35.7 8.9 52 643-696 34-85 (118)
54 2qsv_A Uncharacterized protein 77.6 5.8 0.0002 38.7 8.0 80 641-728 20-105 (220)
55 3qis_A Inositol polyphosphate 64.7 12 0.00041 39.5 7.4 88 641-730 47-142 (366)
56 3idu_A Uncharacterized protein 62.7 21 0.0007 31.5 7.3 50 640-693 33-83 (127)
57 2x41_A Beta-glucosidase; hydro 52.1 18 0.00063 41.8 6.6 76 621-696 596-678 (721)
58 1m1s_A WR4; structural genomic 51.3 50 0.0017 28.5 7.6 50 643-695 26-75 (116)
59 3zyz_A Beta-D-glucoside glucoh 50.4 60 0.0021 37.4 10.5 56 640-696 613-675 (713)
60 1row_A SSP-19, MSP-domain prot 50.3 58 0.002 27.7 7.9 49 644-695 19-67 (109)
61 2kq1_A BH0266 protein; solutio 49.7 4.6 0.00016 35.3 0.8 52 645-696 58-111 (119)
62 1msp_A MSP, major sperm protei 48.0 45 0.0015 29.1 7.1 50 643-695 28-77 (126)
63 1z9l_A Vesicle-associated memb 46.0 85 0.0029 27.3 8.6 52 641-695 28-79 (128)
64 1wic_A Hypothetical protein ri 45.7 54 0.0018 29.7 7.4 50 643-695 38-87 (152)
65 3isy_A Bsupi, intracellular pr 44.2 1.3E+02 0.0045 26.0 9.2 53 640-693 18-87 (120)
66 3abz_A Beta-glucosidase I; gly 43.4 1E+02 0.0034 36.3 11.1 71 620-693 715-795 (845)
67 1w8o_A Bacterial sialidase; 3D 43.1 1.2E+02 0.0041 33.7 11.6 64 624-696 363-427 (601)
68 2cri_A Vesicle-associated memb 40.0 64 0.0022 29.0 7.0 51 642-695 33-83 (147)
69 1wgl_A TOLL-interacting protei 38.0 22 0.00077 26.7 2.9 37 506-542 3-39 (59)
70 2qsv_A Uncharacterized protein 35.9 91 0.0031 29.9 7.8 52 641-696 135-187 (220)
71 3q48_A Chaperone CUPB2; IG fol 35.0 99 0.0034 30.6 8.0 52 641-695 43-104 (257)
72 4ay0_A Chaperone protein CAF1M 27.4 1.4E+02 0.0047 28.8 7.4 59 641-705 27-92 (218)
73 3sd2_A Putative member of DUF3 26.3 2.6E+02 0.0091 23.3 7.7 66 627-713 35-100 (101)
74 2xg5_A PAPD, chaperone protein 25.4 2.3E+02 0.0077 27.2 8.6 63 641-708 15-86 (218)
75 1ni7_A ER75, hypothetical prot 24.3 55 0.0019 29.8 3.6 31 502-533 79-109 (155)
76 2l0d_A Cell surface protein; s 23.4 2.5E+02 0.0085 23.9 7.4 24 640-663 19-43 (114)
77 4djm_A DRAB; chaperone, PILI; 21.5 2.9E+02 0.0098 26.9 8.5 51 642-695 38-93 (239)
78 3g0m_A Cysteine desulfuration 20.6 52 0.0018 29.4 2.6 33 500-533 70-102 (141)
79 4ep8_B Urease subunit beta; al 20.3 1.5E+02 0.0052 24.6 5.0 50 641-691 19-82 (101)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=5.6e-120 Score=1045.46 Aligned_cols=589 Identities=40% Similarity=0.698 Sum_probs=529.4
Q ss_pred cCCCCcccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEee
Q 040458 108 TTRSPQFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGA 187 (732)
Q Consensus 108 ~~~s~~~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~ 187 (732)
|+++|+|+||....+ +|..+.+|+||+|||||||||++||+|.+.+++|+|.+|+|.|+.|.+|+...||+|++++
T Consensus 1 Tt~s~~flgl~~~~~----~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~ 76 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSG----LWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGA 76 (649)
T ss_dssp CCSHHHHTTCCSSSS----HHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEE
T ss_pred CCCChHHcCCCCchh----hHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeee
Confidence 578999999986555 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc----------------------------------------
Q 040458 188 RFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------------- 227 (732)
Q Consensus 188 ~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------------- 227 (732)
++|.++++... ++...+..+++|.+||||||||||||+
T Consensus 77 ~~f~~~~~~~~--~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i 154 (649)
T 3i6s_A 77 NYFNKGILAND--PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDL 154 (649)
T ss_dssp EECCHHHHHHC--TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHH
T ss_pred EeccCcccccc--cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHH
Confidence 99998765433 233445677899999999999999964
Q ss_pred ------cccCCCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCcccce
Q 040458 228 ------AVSDGVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPA 301 (732)
Q Consensus 228 ------Ai~dgvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~~ 301 (732)
|+++||||||||||+...++..+++.+++++|+++||+||+||||+|+...++.+.+||+++|||+++||.|+.
T Consensus 155 ~~Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~ 234 (649)
T 3i6s_A 155 IAAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAG 234 (649)
T ss_dssp HHHHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceee
Confidence 78899999999999877777889999999999999999999999999999999999999999999999999999
Q ss_pred eEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCc--cceEEEEecCCCCcchhhHHHHH
Q 040458 302 DVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFV--RGKIVVCDRGINSRPAKGEVVKK 379 (732)
Q Consensus 302 ~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~--~gkivl~~~g~~~~~~~~~~~~~ 379 (732)
.+.+++++++.+.+++..... ...+|+++.. ....|.+..++..++ +|||++|+||.|.+.+|..++++
T Consensus 235 ~~~lgng~~~~g~sl~~~~~~--~~~~plv~~~-------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~ 305 (649)
T 3i6s_A 235 TLTLGNGLKIRGWSLFPARAF--VRDSPVIYNK-------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRA 305 (649)
T ss_dssp EEEETTSCEEEEECCCSSCBC--EEEEEEECCT-------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHH
T ss_pred EEEeCCCcEEeeeecccCccc--CcceeeEecc-------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHh
Confidence 999999999999999876543 5789999865 357899988888877 99999999999999999999999
Q ss_pred cCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCC
Q 040458 380 AGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPN 459 (732)
Q Consensus 380 ~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~ 459 (732)
+|+.|+|++|+. .....+.+.+|+++|+..+|+.|+.|++++.+ ++++|.+..+..+..+.+.++.||||||+
T Consensus 306 ~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~----~~a~i~~~~t~~~~~~~~~va~FSSrGP~ 378 (649)
T 3i6s_A 306 RLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVT----PTATITFQETYLDTKPAPVVAASSARGPS 378 (649)
T ss_dssp TCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSS----CEEEEEEEEEECCCSSCCEECTTSCCSSC
T ss_pred cCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCC----ceEEEeecceeeccCCCCcccccCCCCCC
Confidence 999999999987 34566788999999999999999999999999 99999999999988899999999999999
Q ss_pred CCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCC-CccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhh
Q 040458 460 PETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDK-RKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTT 538 (732)
Q Consensus 460 ~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~T 538 (732)
.+.+++|||||+|||++|+|+|+....+.....+. +...|..+||||||||||||++|||||+||+|+|++||++||+|
T Consensus 379 ~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtT 458 (649)
T 3i6s_A 379 RSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTT 458 (649)
T ss_dssp TTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHT
T ss_pred CCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcc
Confidence 98889999999999999999999865543333332 33589999999999999999999999999999999999999999
Q ss_pred cccccCCCCccccCCCCCCCCCCCCCCCcccccccCCCCccccCCchhhhhhhhccCCCccceEEEeccccc--cCCCCC
Q 040458 539 AYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNPGLIYDLTSYDYVNFLCNSNYTVNNIQVITRRKAD--CSGATR 616 (732)
Q Consensus 539 A~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~--c~~~~~ 616 (732)
|+++++.+.++.++..+.++++++||+|+||+.+|++||||||+..+||++|||++||+.++|+.|++.+.+ |+ .
T Consensus 459 A~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~-~-- 535 (649)
T 3i6s_A 459 ADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCS-N-- 535 (649)
T ss_dssp CBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CC-C--
T ss_pred cccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCC-C--
Confidence 999999999998877788999999999999999999999999999999999999999999999999988777 97 3
Q ss_pred CCCCCccCCCceEEEE-eecCCccee--EEEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEE
Q 040458 617 AGHVGNLNYPSLSAVF-QQYGKHKMS--THFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVE 693 (732)
Q Consensus 617 ~~~~~~ln~psi~~~~-~~~~~~~~~--~~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~ 693 (732)
.+.+||||||++.+ +.... .. ++|+|||||||+..++|+++++.|+|++|+|+|++|+|++.+|+++|+|||+
T Consensus 536 --~~~~lNyPs~~~~~~~~~~~--~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~ 611 (649)
T 3i6s_A 536 --PSADLNYPSFIALYSIEGNF--TLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIR 611 (649)
T ss_dssp --CCCCCCCSSEEEEECCSSCC--CCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEE
T ss_pred --chhhcCCCcEEeecccCCCC--ccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEE
Confidence 46799999999987 32110 12 8999999999998999999999999999999999999998999999999999
Q ss_pred EcccccCCCCCCceEEEEEEEC--CccEEEeEEEEEec
Q 040458 694 ATAVKLSPGSSSMKSGKIVWSD--GKHNVTSPIVVTMQ 729 (732)
Q Consensus 694 ~~~~~~~~~~~~~~~G~i~~~~--~~~~vr~P~~~~~~ 729 (732)
... ... +.|.||+|+|+| |+|.||+||+|++.
T Consensus 612 ~~~---~~~-~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 612 YIG---DEG-QSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp ECC---C----CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred ecc---cCC-CceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 865 333 678999999999 99999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=9.4e-108 Score=946.61 Aligned_cols=569 Identities=43% Similarity=0.751 Sum_probs=470.5
Q ss_pred cCCCCcccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEee
Q 040458 108 TTRSPQFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGA 187 (732)
Q Consensus 108 ~~~s~~~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~ 187 (732)
|+++|+|+||+. + +|.+..+|+||+|||||||||++||+|++.++++++.+|+|.|+.+.+| .||+|++|+
T Consensus 1 tt~s~~flGl~~--~----~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~---~~n~k~ig~ 71 (621)
T 3vta_A 1 TTRSWDFLGFPL--T----VPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNF---RCNRKIIGA 71 (621)
T ss_dssp CCSHHHHTTCCT--T----CCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSC---CCCSSEEEE
T ss_pred CCCChhHcCCCc--c----ccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCc---ccCcceeee
Confidence 589999999974 3 7888889999999999999999999999999999999999999998888 499999999
Q ss_pred eecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc----------------------------------------
Q 040458 188 RFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------------- 227 (732)
Q Consensus 188 ~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------------- 227 (732)
|+|..++.... .+..+|+|++||||||||||||+
T Consensus 72 ~~~~~~~~~~~------~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di 145 (621)
T 3vta_A 72 RSYHIGRPISP------GDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDI 145 (621)
T ss_dssp EECCCSSSCCT------TCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHH
T ss_pred eecccCCccCC------CCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHH
Confidence 99988654432 23467899999999999999985
Q ss_pred ------cccCCCeEEEecCCCCC-CCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCcccc
Q 040458 228 ------AVSDGVDVVSLSVGGVV-VPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFP 300 (732)
Q Consensus 228 ------Ai~dgvdVInlSlG~~~-~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~ 300 (732)
|+++|+||||||||+.. ..+..+++++++++|+++||+||+||||+|+...++.+.+||+++|++++.+|.|.
T Consensus 146 ~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~ 225 (621)
T 3vta_A 146 LAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFV 225 (621)
T ss_dssp HHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEE
T ss_pred HHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccce
Confidence 78889999999999864 45567899999999999999999999999999999999999999999999999999
Q ss_pred eeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCC---CCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHH
Q 040458 301 ADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSES---GDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVV 377 (732)
Q Consensus 301 ~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~---~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 377 (732)
..+.+++++.+.+.+++... ...+++++..... ........|.+..+++.+++|||++|.++ +..+..+.
T Consensus 226 ~~~~~~~~~~~~~~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~~~~~~ 298 (621)
T 3vta_A 226 TQVQIGNGQSFQGVSINTFD----NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGPHEFFK 298 (621)
T ss_dssp EEEEETTSCEEEEBCCCCSC----CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCHHHHHH
T ss_pred eeEEeccCceeeeeecccCC----CcccccccccccccccccccccccccccccccccccceEEEEecC---CChhHHhh
Confidence 99999999999888876543 4567777765543 22344567999999999999999999865 45677788
Q ss_pred HHcCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCC
Q 040458 378 KKAGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARG 457 (732)
Q Consensus 378 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~G 457 (732)
+..|+.++|++++... ..+.+.+|...++..++..+..|+..+.. +.+.+....+. .....+.++.|||||
T Consensus 299 ~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~----~~a~~~~~~~~-~~~~~~~va~FSSrG 369 (621)
T 3vta_A 299 SLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRS----PGATIFKSTTI-LNASAPVVVSFSSRG 369 (621)
T ss_dssp HHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSS----CCEEECCCEEE-ECTTCCCBCTTSCCC
T ss_pred hhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCC----cceEEecceEe-ccCCCCceeeecCCC
Confidence 8899999999987654 24567899999999999999999999987 77776544443 446788999999999
Q ss_pred CCCCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q 040458 458 PNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMT 537 (732)
Q Consensus 458 p~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~ 537 (732)
|+...+++|||||+|||++|+|+|+....... ..+...|..|||||||||||||++|||||+||+|+|++||++||+
T Consensus 370 P~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmt 446 (621)
T 3vta_A 370 PNRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMT 446 (621)
T ss_dssp SCTTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred CCCCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHh
Confidence 99877899999999999999999987543222 223458999999999999999999999999999999999999999
Q ss_pred hcccccCCCCccccCCCCCCCCCCCCCCCcccccccCCCCccccCCchhhhhhhhccCCCccceEEEeccccccCCCCCC
Q 040458 538 TAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNPGLIYDLTSYDYVNFLCNSNYTVNNIQVITRRKADCSGATRA 617 (732)
Q Consensus 538 TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~ 617 (732)
||++++.. +.++.+++||+|+||+.+|++||||||+..+||+.|||++||+..+++.+++....|. ....
T Consensus 447 TA~~~~~~---------~~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~-~~~~ 516 (621)
T 3vta_A 447 TASPMNAR---------FNPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACT-SGNT 516 (621)
T ss_dssp TCBCCCTT---------TCTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------
T ss_pred cCCccccc---------CCCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccC-CCCc
Confidence 99988643 3567789999999999999999999999999999999999999999999999888887 5444
Q ss_pred CCCCccCCCceEEEEeecCCcceeEEEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEccc
Q 040458 618 GHVGNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAV 697 (732)
Q Consensus 618 ~~~~~ln~psi~~~~~~~~~~~~~~~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~ 697 (732)
....+||||||++.+..... .+++|+|||||||....+|+++++.|+|++|+|+|++|+|++.+|+++|+|||+...
T Consensus 517 ~~~~~lN~pS~~v~~~~~~~--~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~~- 593 (621)
T 3vta_A 517 GRVWDLNYPSFGLSVSPSQT--FNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGSI- 593 (621)
T ss_dssp -CGGGSCCSSEEEECCSSCC--EEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEECC-
T ss_pred CcccccccccEEEEccCCCc--eEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEecC-
Confidence 56789999999997654332 689999999999999999999999999999999999999999999999999998643
Q ss_pred ccCCCCCCceEEEEEEECCccEEEeEEEEEe
Q 040458 698 KLSPGSSSMKSGKIVWSDGKHNVTSPIVVTM 728 (732)
Q Consensus 698 ~~~~~~~~~~~G~i~~~~~~~~vr~P~~~~~ 728 (732)
. +.|+||+|+|+||+|.||+||+|+.
T Consensus 594 ----~-~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 594 ----K-GFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp ----C-SSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred ----C-CceEEEEEEEEcCCEEEEeCEEEEE
Confidence 3 7899999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=2.2e-78 Score=728.32 Aligned_cols=500 Identities=23% Similarity=0.321 Sum_probs=397.0
Q ss_pred cccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCC----------CCccCCceeEeeeecccC
Q 040458 124 AGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDF----------PATSCNRKLIGARFFSQG 193 (732)
Q Consensus 124 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f----------~~~~~n~kiig~~~~~~g 193 (732)
+..+|.++.+|+||+|||||||||++||+|++. ..|++.|..+..| ...+||+|++++++|.++
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 355899999999999999999999999999853 4677777542211 234899999999998763
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------------------cc
Q 040458 194 YESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------------------AV 229 (732)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------------Ai 229 (732)
. .++ |+.||||||||||||+ |+
T Consensus 80 ~-------------~~~-D~~gHGThVAgiiAg~~~~~~~~~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai 145 (926)
T 1xf1_A 80 G-------------KTA-VDQEHGTHVSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAI 145 (926)
T ss_dssp S-------------CCC-CSSTTTTHHHHSSCCCCCCCCSCSCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred C-------------CCC-CCCCcHHHHHHHHhCCCccCcccCCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHH
Confidence 1 122 8899999999999974 78
Q ss_pred cCCCeEEEecCCCCCC--CCcccHHHHHHHhhhcCCceEEEecCCCCCCC-------------Cccc--ccCCCceeecC
Q 040458 230 SDGVDVVSLSVGGVVV--PYFLDAIAIAAFGASDHGVFVSASAGNGGPGG-------------LTVT--NVAPWVTTVGA 292 (732)
Q Consensus 230 ~dgvdVInlSlG~~~~--~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~-------------~~~~--~~~p~v~tVga 292 (732)
++||||||||||+... ....+++..++.+|.++||+||+||||+|+.. .++. +.+||+++|||
T Consensus 146 ~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA 225 (926)
T 1xf1_A 146 NLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVAS 225 (926)
T ss_dssp HTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEE
T ss_pred HhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEec
Confidence 8999999999998632 33467888899999999999999999999632 2233 34899999999
Q ss_pred CCcCcccceeEEc-CCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcc
Q 040458 293 GTIDRDFPADVHL-GNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRP 371 (732)
Q Consensus 293 ~~~~~~~~~~~~~-~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~ 371 (732)
++.++.+...+.+ +++....+.+++...++.....+++++... .|.+..+ .+++|||++|+||.|.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~---------g~~~~~~--~~v~Gkivl~~rg~~~~~ 294 (926)
T 1xf1_A 226 YSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR---------GTKEDDF--KDVKGKIALIERGDIDFK 294 (926)
T ss_dssp EBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT---------SCSTTTT--TTCTTSEEEEECCSSCHH
T ss_pred cccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC---------CCCccch--hhcCCeEEEEECCCCCHH
Confidence 9999999888887 666556666666555554467899998654 3776655 689999999999999999
Q ss_pred hhhHHHHHcCceEEEEEcCCCCCccc-cccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeE--eccCCCC
Q 040458 372 AKGEVVKKAGGVGMILANGVFDGEGL-VADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTR--VNVRPAP 448 (732)
Q Consensus 372 ~~~~~~~~~Ga~g~i~~n~~~~~~~~-~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~--~~~~~~~ 448 (732)
+|..+++++|++|+|++|+....... ......+|+..++.+++..|+. . +..+|.+..+. ......+
T Consensus 295 ~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~------~~~ti~~~~~~~~~~~~~~~ 364 (926)
T 1xf1_A 295 DKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----N------PQKTITFNATPKVLPTASGT 364 (926)
T ss_dssp HHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----C------SSCEEEECSSCEEEECSSCS
T ss_pred HHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----C------CceEEEecccceecccCCcc
Confidence 99999999999999999987543322 2345789999999999998874 2 55667766643 4455678
Q ss_pred ccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHH----hhCC
Q 040458 449 VVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLK----AAHP 524 (732)
Q Consensus 449 ~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~----q~~p 524 (732)
.++.||||||+.+ ++|||||+|||++|+++++++ .|..|||||||||||||++|||+ +.||
T Consensus 365 ~~a~FSSrGp~~~--~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P 429 (926)
T 1xf1_A 365 KLSRFSSWGLTAD--GNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQYP 429 (926)
T ss_dssp BCCTTSCCCBCTT--SCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHSSS
T ss_pred eeccccCCCCCCC--CccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhccCC
Confidence 9999999999975 999999999999999999875 79999999999999999999996 4699
Q ss_pred CCCHHH----HHHHHHhhcccccCCCCccccCCCCCCCCCCCCCCCcccccccCCCCccccCCchhhhhhhhccCCCccc
Q 040458 525 DWSPAA----IRSALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNPGLIYDLTSYDYVNFLCNSNYTVNN 600 (732)
Q Consensus 525 ~~sp~~----ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~dy~~~lc~~~~~~~~ 600 (732)
+|+|+| ||++||+||+++...+ ...++++++||+|+||+.+|++|.+ |||..+|...+
T Consensus 430 ~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~~ 491 (926)
T 1xf1_A 430 DMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSSK 491 (926)
T ss_dssp SSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCSC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcce
Confidence 999997 9999999999875321 1235678999999999999999854 67877653221
Q ss_pred eEEEeccccccCCCCCCCCCCccCCCceEEEEeecCCcceeEEEEEEEEecCCCC--ceEEEEEeC--CCCcEEEEecce
Q 040458 601 IQVITRRKADCSGATRAGHVGNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPN--SAYKVTIRP--PSGMTVTVQPEK 676 (732)
Q Consensus 601 ~~~~~~~~~~c~~~~~~~~~~~ln~psi~~~~~~~~~~~~~~~~~rtvtn~~~~~--~ty~~~v~~--~~g~~v~v~p~~ 676 (732)
++++ ... .+.+++|||||+|+.+ .+|++++.. |.++.++|+|..
T Consensus 492 ----------------------i~l~-----~~~-----~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~ 539 (926)
T 1xf1_A 492 ----------------------VHLN-----NVS-----DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKV 539 (926)
T ss_dssp ----------------------EEEE-----EEC-----SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred ----------------------eecc-----ccC-----ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccce
Confidence 2222 111 3678899999999854 578888865 789999999988
Q ss_pred eEEecC-------CcEEEEEEEEEEcccc-----cCCCCCCceEEEEEEE--CCccE-EEeEEEEEecC
Q 040458 677 LVFRRV-------GQKLNFLVRVEATAVK-----LSPGSSSMKSGKIVWS--DGKHN-VTSPIVVTMQQ 730 (732)
Q Consensus 677 l~~~~~-------~~~~~~~vt~~~~~~~-----~~~~~~~~~~G~i~~~--~~~~~-vr~P~~~~~~~ 730 (732)
|.|... ||+++|+|||+.+..+ ..+. +.|+||+|+|+ ++.|. ||+||++....
T Consensus 540 l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~-~~~~~G~i~~~~~~~~~~~v~~P~~~~~g~ 607 (926)
T 1xf1_A 540 LYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKN-GYFLEGFVRFKQDPTKEELMSIPYIGFRGD 607 (926)
T ss_dssp EEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTT-CEEEEEEEEEESSTTSCCCEEEEEEEEESC
T ss_pred eEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccC-CcEEEEEEEEEeCCCCCCEEEeeeEEEecC
Confidence 776544 9999999999986210 1233 57899999999 56664 99999997653
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=6.7e-55 Score=495.19 Aligned_cols=326 Identities=34% Similarity=0.472 Sum_probs=254.9
Q ss_pred CCeEEEEeCCCCCCCCCcchHHHHHHhhccCCCcEEEEecceeeEEEEEcCHHHHHHH-----------hCCCCeEEEEe
Q 040458 32 PKTFIIKVQYDAKPSIFPTHKHWYESSLSSASATLLHTYDTVFHGFSAKLTPSEALRL-----------KTLPHVLAVFS 100 (732)
Q Consensus 32 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~~~~~~~~~L-----------~~~p~V~~V~~ 100 (732)
...|||.|++.... +.+.+.+++.+.+++++|+ .|+||+++++++++++| +++|+|++|++
T Consensus 35 ~~~~iV~~~~~~~~-------~~~~~~~~~~g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~ 106 (539)
T 3afg_A 35 EVSTIIMFDNQADK-------EKAVEILDFLGAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQE 106 (539)
T ss_dssp EEEEEEEESSHHHH-------HHHHHHHHHHTCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEE
T ss_pred ceEEEEEECCCCCH-------HHHHHHHHhcCCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEe
Confidence 45799999875431 1223455566789999997 79999999999999999 88999999999
Q ss_pred ceeeecccCCCCcccCCcCCC--CccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCc
Q 040458 101 EQVRHLHTTRSPQFLGLKSSS--DSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPAT 178 (732)
Q Consensus 101 ~~~~~~~~~~s~~~~gl~~~~--~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~ 178 (732)
++.+++.... +++.... -.+..+|..+.+|+||+|||||||||++||+|.+
T Consensus 107 d~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~----------------------- 159 (539)
T 3afg_A 107 DYVVKVAVET----EGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG----------------------- 159 (539)
T ss_dssp CCEEECC---------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT-----------------------
T ss_pred cccccccCcc----ccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC-----------------------
Confidence 9998875422 2221100 0135589999999999999999999999999953
Q ss_pred cCCceeEeeeecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc-------------------------------
Q 040458 179 SCNRKLIGARFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS------------------------------- 227 (732)
Q Consensus 179 ~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~------------------------------- 227 (732)
++++.++|..+ ...+.|++||||||||||||+
T Consensus 160 ----~i~~~~d~~~~-------------~~~~~D~~gHGThVAgiiag~~~~~~g~~~GvAp~A~l~~~kv~~~~g~~~~ 222 (539)
T 3afg_A 160 ----KVIGWVDFVNG-------------KTTPYDDNGHGTHVASIAAGTGAASNGKYKGMAPGAKLVGIKVLNGQGSGSI 222 (539)
T ss_dssp ----TEEEEEETTTC-------------CSSCCBSSSHHHHHHHHHHCCCGGGTTTTCCSCTTCEEEEEECSCTTSEEEH
T ss_pred ----CEeeeEECCCC-------------CCCCCCCCCCHHHHHHHHhCcCccCCCCEEEECCCCEEEEEEeecCCCCcCH
Confidence 46666777552 134678999999999999863
Q ss_pred ---------ccc----CCCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCc--ccccCCCceeecC
Q 040458 228 ---------AVS----DGVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLT--VTNVAPWVTTVGA 292 (732)
Q Consensus 228 ---------Ai~----dgvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~--~~~~~p~v~tVga 292 (732)
+++ +|++|||||||........+++..++.+|.++|++||+||||+|+...+ .++..+++++|||
T Consensus 223 ~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA 302 (539)
T 3afg_A 223 SDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGA 302 (539)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEE
T ss_pred HHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEee
Confidence 333 3899999999986554556889999999999999999999999976443 4556778888877
Q ss_pred CCcCcccceeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcch
Q 040458 293 GTIDRDFPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPA 372 (732)
Q Consensus 293 ~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~ 372 (732)
..
T Consensus 303 ~~------------------------------------------------------------------------------ 304 (539)
T 3afg_A 303 VD------------------------------------------------------------------------------ 304 (539)
T ss_dssp EC------------------------------------------------------------------------------
T ss_pred ec------------------------------------------------------------------------------
Confidence 31
Q ss_pred hhHHHHHcCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCcccc
Q 040458 373 KGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVAS 452 (732)
Q Consensus 373 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~ 452 (732)
..+.++.
T Consensus 305 -------------------------------------------------------------------------~~~~~a~ 311 (539)
T 3afg_A 305 -------------------------------------------------------------------------KYDVITD 311 (539)
T ss_dssp -------------------------------------------------------------------------TTSCBCS
T ss_pred -------------------------------------------------------------------------CCccccc
Confidence 0135789
Q ss_pred ccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHH
Q 040458 453 FSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIR 532 (732)
Q Consensus 453 fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik 532 (732)
||||||+.+ +++||||+|||++|+++++...... +.....|..++|||||||||||++|||+|+||+|+|++||
T Consensus 312 fSs~Gp~~~--~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk 385 (539)
T 3afg_A 312 FSSRGPTAD--NRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVK 385 (539)
T ss_dssp SSCCCCCTT--CBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHH
T ss_pred ccCCCCCCC--CCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHH
Confidence 999999986 8999999999999999997642110 1111259999999999999999999999999999999999
Q ss_pred HHHHhhcccccCCCCccccCCCCCCCCCCCCCCCcccccccCCCC
Q 040458 533 SALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNPG 577 (732)
Q Consensus 533 ~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~ 577 (732)
++|++||+++... ..+++.||+|+||+.+|++..
T Consensus 386 ~~L~~tA~~~~~~-----------~~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 386 TALIETADIVKPD-----------EIADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHSBCSSGG-----------GCSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHhhCccCCCC-----------CCCccCccCCccCHHHHhhhc
Confidence 9999999976421 135678999999999999843
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=7.8e-53 Score=463.29 Aligned_cols=307 Identities=28% Similarity=0.364 Sum_probs=248.2
Q ss_pred CCeEEEEeCCCCCCCCCcchHHHHHHhhccCCCcEEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeceeeecccCCC
Q 040458 32 PKTFIIKVQYDAKPSIFPTHKHWYESSLSSASATLLHTYDTVFHGFSAKLTPSEALRLKTLPHVLAVFSEQVRHLHTTRS 111 (732)
Q Consensus 32 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s 111 (732)
+.+|||+|+++.. .++.+++.+.+++++|. .+++|+++++++++++|+++|+|++|++++.++++....
T Consensus 2 ~~~~iV~~~~~~~----------~~~~~~~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~ 70 (395)
T 2z2z_A 2 TIRVIVSVDKAKF----------NPHEVLGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPS 70 (395)
T ss_dssp EEEEEEEECTTTC----------CHHHHHHTTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEEC
T ss_pred cEEEEEEECCCcc----------HHHHHHHcCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCC
Confidence 3689999998743 12455667789999998 599999999999999999999999999999997753211
Q ss_pred -----------CcccCCcCCCCccccccccCCCCCc--cEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCc
Q 040458 112 -----------PQFLGLKSSSDSAGLLLKESDFGSD--LVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPAT 178 (732)
Q Consensus 112 -----------~~~~gl~~~~~~~~~~~~~~~~G~G--V~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~ 178 (732)
...|++..+.. ..+|..+ +|+| |+|||||||||++||+|.+
T Consensus 71 ~~~~~~~~~~~~~~w~~~~i~~--~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~----------------------- 124 (395)
T 2z2z_A 71 WLGGGSTQPAQTIPWGIERVKA--PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA----------------------- 124 (395)
T ss_dssp C------CCSCCCCHHHHHTTC--GGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGG-----------------------
T ss_pred cccccccCccccCCcchhhcCH--HHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhh-----------------------
Confidence 23466655543 6689988 9999 9999999999999999974
Q ss_pred cCCceeEeeeecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc-------------------------------
Q 040458 179 SCNRKLIGARFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS------------------------------- 227 (732)
Q Consensus 179 ~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~------------------------------- 227 (732)
+++..++|..+... .+..++.|++||||||||||+|.
T Consensus 125 ----~~~~~~~~~~~~~~--------~~~~~~~d~~gHGT~vAgiia~~~n~~g~~GvAp~a~l~~~kv~~~~g~~~~~~ 192 (395)
T 2z2z_A 125 ----NIAWCVSTLRGKVS--------TKLRDCADQNGHGTHVIGTIAALNNDIGVVGVAPGVQIYSVRVLDARGSGSYSD 192 (395)
T ss_dssp ----GEEEEEECGGGCCB--------CCHHHHBCSSSHHHHHHHHHHCCCSSSSCCCSSTTCEEEEEECSCTTSEEEHHH
T ss_pred ----ccccCccccCCccc--------CCCCCCCCCCCCHHHHHHHHHeecCCCceEEECCCCEEEEEEEecCCCCccHHH
Confidence 34445555442110 00112468899999999999874
Q ss_pred -------cccC--------------------CCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcc
Q 040458 228 -------AVSD--------------------GVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTV 280 (732)
Q Consensus 228 -------Ai~d--------------------gvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~ 280 (732)
++++ +++|||||||... ....+..++.+|.++|++||+||||+|.....+
T Consensus 193 i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~ 269 (395)
T 2z2z_A 193 IAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSY 269 (395)
T ss_dssp HHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCB
T ss_pred HHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
Confidence 4555 9999999999743 245677888889999999999999999877777
Q ss_pred cccCCCceeecCCCcCcccceeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceE
Q 040458 281 TNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKI 360 (732)
Q Consensus 281 ~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gki 360 (732)
++..|++|+|||..
T Consensus 270 Pa~~~~vi~Vga~~------------------------------------------------------------------ 283 (395)
T 2z2z_A 270 PAAYPEVIAVGAID------------------------------------------------------------------ 283 (395)
T ss_dssp TTTSTTEEEEEEEC------------------------------------------------------------------
T ss_pred ccCCCCEEEEEEec------------------------------------------------------------------
Confidence 88889999998731
Q ss_pred EEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEecee
Q 040458 361 VVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGT 440 (732)
Q Consensus 361 vl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t 440 (732)
T Consensus 284 -------------------------------------------------------------------------------- 283 (395)
T 2z2z_A 284 -------------------------------------------------------------------------------- 283 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHH
Q 040458 441 RVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLK 520 (732)
Q Consensus 441 ~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~ 520 (732)
..+.++.||++|| +|+|||++|+++++.+ .|..++|||||||||||++|||+
T Consensus 284 -----~~~~~a~fS~~G~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~VaG~aAll~ 335 (395)
T 2z2z_A 284 -----SNDNIASFSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQ 335 (395)
T ss_dssp -----TTSCBCTTSCSSC----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCCcccCCCC----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHHHHHHHHHHH
Confidence 1135789999997 5799999999999875 89999999999999999999999
Q ss_pred hhCC-------------CCCHHHHHHHHHhhcccccCCCCccccCCCCCCCCCCCCCCCcccccccCCC
Q 040458 521 AAHP-------------DWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNP 576 (732)
Q Consensus 521 q~~p-------------~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 576 (732)
|++| .|++.+||++|++||+++.. +..+..||+|+||+.+|++.
T Consensus 336 ~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~------------~g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 336 AAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHHH
T ss_pred HhCccccccccccccccCCCHHHHHHHHHhhccccCC------------CCCCCCccCceeCHHHHHHH
Confidence 9999 99999999999999998742 23457999999999999873
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=3e-51 Score=461.97 Aligned_cols=324 Identities=22% Similarity=0.263 Sum_probs=247.9
Q ss_pred CCeEEEEeCCCCCCCCCcchHHHHHHhhccCCCcEEEEecceeeEEEEEcCHHHHHHHhC-CCCeEEEEeceeeecccCC
Q 040458 32 PKTFIIKVQYDAKPSIFPTHKHWYESSLSSASATLLHTYDTVFHGFSAKLTPSEALRLKT-LPHVLAVFSEQVRHLHTTR 110 (732)
Q Consensus 32 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~~~~~~~~~L~~-~p~V~~V~~~~~~~~~~~~ 110 (732)
.+.|||++++.. .+.+.+++.+.++++.|. .|++|+++++++++++|++ +|+|++|++++.+++....
T Consensus 44 ~~~yiv~~~~~~----------~~~~~~~~~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~ 112 (471)
T 3t41_A 44 ELYYSVEYKNTA----------TFNKLVKKKSLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEK 112 (471)
T ss_dssp CEEEEEEESCHH----------HHHHHHHHHTCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCC
T ss_pred ceEEEEEcCCHH----------HHHHHHHhCCCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceecccccc
Confidence 458999877542 245667777888999996 5999999999999999999 9999999999988875433
Q ss_pred C----------CcccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccC
Q 040458 111 S----------PQFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSC 180 (732)
Q Consensus 111 s----------~~~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~ 180 (732)
. ...|++..+.. ...+|..+.+|+||+|||||||||++||+|.+. .|.+
T Consensus 113 ~~~~~~~~~~~~~~w~l~~i~~-~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~-------~~~~------------- 171 (471)
T 3t41_A 113 TIDRTSNESLFSRQWDMNKITN-NGASYDDLPKHANTKIAIIDTGVMKNHDDLKNN-------FSTD------------- 171 (471)
T ss_dssp CCCC---CCSCCCCHHHHTTTT-TTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTT-------BCTT-------------
T ss_pred ccccCCCCccccccccHhhccC-cHHHHhccCCCCCcEEEEEeCCCCCCChhHhcC-------cccC-------------
Confidence 2 12466666544 235899999999999999999999999999764 1111
Q ss_pred CceeEeeeecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------
Q 040458 181 NRKLIGARFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------- 227 (732)
Q Consensus 181 n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------- 227 (732)
.+.|..+........+...+...+.|+.||||||||||+|+
T Consensus 172 ------~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g~~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~ 245 (471)
T 3t41_A 172 ------SKNLVPLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANGKLIGVAPNNKFTMYRVFGSKKTELLWVSKAIV 245 (471)
T ss_dssp ------CEECCCTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBSSSBCSSTTSCEEEEECCSSSCCCHHHHHHHHH
T ss_pred ------CcccccCCCccCCCcccCCCCCCCcCCCCccchhhheeecCCceeEECCCCeEEEEEeccCCCCcHHHHHHHHH
Confidence 11122211111111111122345788999999999999954
Q ss_pred -cccCCCeEEEecCCCCCC-C------------CcccHHHHHHHhhhcCCceEEEecCCCCCCCCc--------------
Q 040458 228 -AVSDGVDVVSLSVGGVVV-P------------YFLDAIAIAAFGASDHGVFVSASAGNGGPGGLT-------------- 279 (732)
Q Consensus 228 -Ai~dgvdVInlSlG~~~~-~------------~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~-------------- 279 (732)
++++|++|||||||.... . ...+.+..++..+.++|++||+||||+|.....
T Consensus 246 ~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~ 325 (471)
T 3t41_A 246 QAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNG 325 (471)
T ss_dssp HHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSS
T ss_pred HHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCC
Confidence 677899999999997311 1 123567888888999999999999999975432
Q ss_pred ----ccccCCCceeecCCCcCcccceeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCC
Q 040458 280 ----VTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAF 355 (732)
Q Consensus 280 ----~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~ 355 (732)
.++..+++|+|||.
T Consensus 326 ~~~~~Pa~~~~vitVgA~-------------------------------------------------------------- 343 (471)
T 3t41_A 326 EVKDVPASMDNVVTVGST-------------------------------------------------------------- 343 (471)
T ss_dssp EEEEETTTSTTEEEEEEE--------------------------------------------------------------
T ss_pred ceeeccccCCCeEEEEee--------------------------------------------------------------
Confidence 33455666666552
Q ss_pred ccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEE
Q 040458 356 VRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATI 435 (732)
Q Consensus 356 ~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i 435 (732)
T Consensus 344 -------------------------------------------------------------------------------- 343 (471)
T 3t41_A 344 -------------------------------------------------------------------------------- 343 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCc----------------------EEecCCCCCCCCCCCCC
Q 040458 436 VFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLN----------------------ILAAWPDKVGPSGIPTD 493 (732)
Q Consensus 436 ~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~----------------------I~sa~~~~~~~~~~~~~ 493 (732)
...+.++.||++||+. |||+|||++ |+++++.+
T Consensus 344 ---------~~~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~--------- 398 (471)
T 3t41_A 344 ---------DQKSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG--------- 398 (471)
T ss_dssp ---------CTTSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS---------
T ss_pred ---------CCCCCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC---------
Confidence 1224678999999974 599999987 89998875
Q ss_pred CCccceeeecCcccchhHHHHHHHHHHhhCC-CCCHHHHHHHHHhhcccccCCCCccccCCCCCCCCCCCCCCCcccccc
Q 040458 494 KRKTEFNILSGTSMACPHVSGLAALLKAAHP-DWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQK 572 (732)
Q Consensus 494 ~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p-~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~ 572 (732)
.|..++|||||||||||++|||+|++| .++|++||++|++||++... .+...||+|+||+.+
T Consensus 399 ----~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~ 461 (471)
T 3t41_A 399 ----RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPFSRYGHGELDVYK 461 (471)
T ss_dssp ----SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCHHHHTTCBBCHHH
T ss_pred ----CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCcCccccChhCHHH
Confidence 799999999999999999999999999 89999999999999997632 455689999999999
Q ss_pred cCCCC
Q 040458 573 AMNPG 577 (732)
Q Consensus 573 A~~~~ 577 (732)
|++..
T Consensus 462 Al~~a 466 (471)
T 3t41_A 462 ALNVA 466 (471)
T ss_dssp HTTTT
T ss_pred HHHHH
Confidence 99843
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=2.3e-52 Score=476.50 Aligned_cols=305 Identities=24% Similarity=0.281 Sum_probs=63.4
Q ss_pred CCCeEEEEeCCCCCCCCCcchHHHHHHhhccCC--CcEEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeceeeeccc
Q 040458 31 TPKTFIIKVQYDAKPSIFPTHKHWYESSLSSAS--ATLLHTYDTVFHGFSAKLTPSEALRLKTLPHVLAVFSEQVRHLHT 108 (732)
Q Consensus 31 ~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~~~ 108 (732)
.+++|||+||++......+.+.+++...+.+.+ .++++.|++.|+||+++++++++++|+++|+|++|++++.++.+
T Consensus 74 ipg~YIV~lk~~~~~~~~~~~~~~l~a~~~~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~- 152 (692)
T 2p4e_P 74 LPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ- 152 (692)
T ss_dssp EEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC-
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHHHHHhhcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC-
Confidence 456999999998775555555666665554443 68999999999999999999999999999999999999988652
Q ss_pred CCCCcccCCcCCCCc--cccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEe
Q 040458 109 TRSPQFLGLKSSSDS--AGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIG 186 (732)
Q Consensus 109 ~~s~~~~gl~~~~~~--~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig 186 (732)
...|++.++... ....|..+.+|+||+|||||||||++||+|.+.. .|. +|
T Consensus 153 ---~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~------~~~-------~~----------- 205 (692)
T 2p4e_P 153 ---SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV------MVT-------DF----------- 205 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCce------Eec-------cc-----------
Confidence 234777665431 1236777889999999999999999999997541 010 01
Q ss_pred eeecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------cccC--
Q 040458 187 ARFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------AVSD-- 231 (732)
Q Consensus 187 ~~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------Ai~d-- 231 (732)
++... .++ ......+.|++||||||||||+|+ ++++
T Consensus 206 --~~~~d---~dg----~~~~~~~~D~~GHGTHVAGiIAg~~~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~ 276 (692)
T 2p4e_P 206 --ENVPE---EDG----TRFHRQASKCDSHGTHLAGVVSGRDAGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQL 276 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --ccccC---CCC----CcccCCCCCCCCcHHHhhhHhhcCCCccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhh
Confidence 00000 000 000134678999999999999976 3443
Q ss_pred ----CCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCC-cccccCCCceeecCCCcCcccceeEEcC
Q 040458 232 ----GVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGL-TVTNVAPWVTTVGAGTIDRDFPADVHLG 306 (732)
Q Consensus 232 ----gvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~-~~~~~~p~v~tVga~~~~~~~~~~~~~~ 306 (732)
|++|||||||+.. ...+..++.+|.++|++||+||||+|.+.. ..++..|++|+|||.+.+...
T Consensus 277 ~~~~g~~VINmSlGg~~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~------- 345 (692)
T 2p4e_P 277 VQPVGPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCceEEEecCCCCC----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc-------
Confidence 8999999999742 356677778889999999999999997654 346778999999984311000
Q ss_pred CCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEE
Q 040458 307 NGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMI 386 (732)
Q Consensus 307 ~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i 386 (732)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCC
Q 040458 387 LANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEIL 466 (732)
Q Consensus 387 ~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~l 466 (732)
...-+.||+|||.
T Consensus 346 ------------------------------------------------------------a~~ss~fSn~G~~------- 358 (692)
T 2p4e_P 346 ------------------------------------------------------------VTLGTLGTNFGRC------- 358 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------------------------------cccccccCCCCCc-------
Confidence 0001238999984
Q ss_pred CCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccc
Q 040458 467 KPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTV 542 (732)
Q Consensus 467 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~ 542 (732)
|||+|||++|+++++.... .|..++|||||||||||++|||+|++|+|+|++||++|++||.+.
T Consensus 359 -vDI~APG~~I~St~~~~~~-----------~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 359 -VDLFAPGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred -eeEEecCCcEEeeccCCCC-----------ceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 5999999999999987422 799999999999999999999999999999999999999999864
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.5e-50 Score=449.64 Aligned_cols=353 Identities=25% Similarity=0.313 Sum_probs=247.7
Q ss_pred cccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeeccc
Q 040458 113 QFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQ 192 (732)
Q Consensus 113 ~~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~ 192 (732)
..|++.++.. ..+|..+ |+||+|||||||||++||+|.+. ++..+++..
T Consensus 4 ~~W~l~~i~~--~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~---------------------------~~~~~~~~~ 52 (441)
T 1y9z_A 4 TPWGQTFVGA--TVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN---------------------------NVTGTNNSG 52 (441)
T ss_dssp CCHHHHHTTC--SSSCCTT--GGGCEEEEEESCCCTTSTTTTTS---------------------------EEEECCCTT
T ss_pred CCCChhhcCh--hhhhhcC--CCCcEEEEEcCCCCCCChhHhcC---------------------------cccCcccCC
Confidence 3577776654 6688764 77999999999999999999743 111111111
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc----------------------------------------cccC-
Q 040458 193 GYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS----------------------------------------AVSD- 231 (732)
Q Consensus 193 g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~----------------------------------------Ai~d- 231 (732)
..+...+.|+.||||||||||+|. |+++
T Consensus 53 -----------~~~~~~~~d~~gHGT~vAgiia~~~~~~g~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~ 121 (441)
T 1y9z_A 53 -----------TGNWYQPGNNNAHGTHVAGTIAAIANNEGVVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSG 121 (441)
T ss_dssp -----------SCCTTCCCSSCCHHHHHHHHHHCCCSSSBCCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTT
T ss_pred -----------CCCCCCCCCCCCcHHHHHHHHhcccCCCCceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhc
Confidence 011234678899999999999983 6778
Q ss_pred CCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCccccee---------
Q 040458 232 GVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPAD--------- 302 (732)
Q Consensus 232 gvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~~~--------- 302 (732)
|+||||||||.... ...+..++.+|.++|++||+||||+|.....+++..+++|+|||.+.+......
T Consensus 122 g~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv 198 (441)
T 1y9z_A 122 GANVVTMSLGGSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEI 198 (441)
T ss_dssp CCSEEEECCCBSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEE
T ss_pred CCcEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEE
Confidence 99999999997532 346677888899999999999999998877888889999999998766432111
Q ss_pred ----------EEcCCCe----EEeeeeeecCCCCCCCceEE--EEEcCCCC--CCCCCccccCCC--CCCCCCccceEEE
Q 040458 303 ----------VHLGNGK----IIPGVSVYSGPGLKKDQMYS--LVYAGSES--GDGYSASLCLEG--SLDPAFVRGKIVV 362 (732)
Q Consensus 303 ----------~~~~~g~----~~~~~s~~~~~~~~~~~~~~--lv~~~~~~--~~~~~~~~C~~~--~~~~~~~~gkivl 362 (732)
...++++ .+.+.+++....++....++ +.+..... ........|... .++..+++|||++
T Consensus 199 ~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl 278 (441)
T 1y9z_A 199 SGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICL 278 (441)
T ss_dssp EEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEE
T ss_pred EeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEE
Confidence 0112222 22333333211110000000 01111000 001123457643 4567899999999
Q ss_pred EecCCC-----CcchhhHHHHHcCceEEEEEcCCCCCcc------ccccCCcccEEEEccccHHHHHHHHHhcCCCCCCc
Q 040458 363 CDRGIN-----SRPAKGEVVKKAGGVGMILANGVFDGEG------LVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPA 431 (732)
Q Consensus 363 ~~~g~~-----~~~~~~~~~~~~Ga~g~i~~n~~~~~~~------~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~ 431 (732)
|+|+.+ .+.+|..+++++|+.++|++|+...... .......+|.+.++..+|+.|+.++.+.
T Consensus 279 ~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~------- 351 (441)
T 1y9z_A 279 VERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS------- 351 (441)
T ss_dssp EECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE-------
T ss_pred EeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC-------
Confidence 999876 6778999999999999999988653211 1123467999999999999998865321
Q ss_pred eEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhH
Q 040458 432 TATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPH 511 (732)
Q Consensus 432 ~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~ 511 (732)
+++ ++... ..|..+|||||||||
T Consensus 352 -~t~-------------------------------------------~~~~~-------------~~y~~~sGTSmAaP~ 374 (441)
T 1y9z_A 352 -TTV-------------------------------------------SNQGN-------------QDYEYYNGTSMATPH 374 (441)
T ss_dssp -EEE-------------------------------------------EEEEE-------------ESEEEECSHHHHHHH
T ss_pred -ccc-------------------------------------------ccccC-------------CCceeecccccCCcc
Confidence 111 11111 179999999999999
Q ss_pred HHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCccccCCCCCCCCCCCCCCCcccccccCCCCccccCCchhhhhhh
Q 040458 512 VSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNPGLIYDLTSYDYVNFL 591 (732)
Q Consensus 512 VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~~~~dy~~~l 591 (732)
|||++|||+|+||+|+|++||++||+||++++.. ..+.+||+|+||+.+|+ ||+.||
T Consensus 375 VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~------------g~~~~~G~G~vn~~~A~-----------~~~~~l 431 (441)
T 1y9z_A 375 VSGVATLVWSYHPECSASQVRAALNATADDLSVA------------GRDNQTGYGMINAVAAK-----------AYLDES 431 (441)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSS------------SCBTTTBTCBCCHHHHH-----------HHHHHC
T ss_pred cchHHHHHHHHCCCCCHHHHHHHHHhhchhhccC------------CCcccccccccCHHHHH-----------HHHHhh
Confidence 9999999999999999999999999999987543 23568999999999996 499999
Q ss_pred hccCCC
Q 040458 592 CNSNYT 597 (732)
Q Consensus 592 c~~~~~ 597 (732)
|+.++.
T Consensus 432 c~~~~~ 437 (441)
T 1y9z_A 432 CTGPTD 437 (441)
T ss_dssp TTCC--
T ss_pred hcCCCC
Confidence 998863
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=8.3e-50 Score=458.53 Aligned_cols=341 Identities=24% Similarity=0.252 Sum_probs=248.8
Q ss_pred CCCCCCCeEEEEeCCCCCCCCCcchHHHHHHhhccCCCcEEEEecceeeEEEEEcCH----HHHHHHh--CCCCeEEEEe
Q 040458 27 NEAETPKTFIIKVQYDAKPSIFPTHKHWYESSLSSASATLLHTYDTVFHGFSAKLTP----SEALRLK--TLPHVLAVFS 100 (732)
Q Consensus 27 ~~~~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~~~~----~~~~~L~--~~p~V~~V~~ 100 (732)
..+..+++|||+|++... .++.++..+.++.+++. .+++++++++. +.+++|+ ++|+|++|||
T Consensus 26 ~~~~~~~~~IV~~k~~~~----------~~~~~~~~g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vep 94 (671)
T 1r6v_A 26 DGEYTEGKILVGYNDRSE----------VDKIVKAVNGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEP 94 (671)
T ss_dssp TTSBCTTEEEEEESSHHH----------HHHHHHHHTCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEEC
T ss_pred cCccCCccEEEEECCCcC----------HHHHHHhcCCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEec
Confidence 346688999999997532 23344455678888887 78999999864 3356676 4899999999
Q ss_pred ceeeecccC---------------------------CCCcccCCcCCCCccccc-cccCCCCCccEEEEEecCCCCCCCC
Q 040458 101 EQVRHLHTT---------------------------RSPQFLGLKSSSDSAGLL-LKESDFGSDLVIGVIDTGVWPERQS 152 (732)
Q Consensus 101 ~~~~~~~~~---------------------------~s~~~~gl~~~~~~~~~~-~~~~~~G~GV~VgVIDTGId~~Hp~ 152 (732)
+..+++... .....|++..+.. ..+ |.. .+|+||+|||||||||++||+
T Consensus 95 d~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~--~~a~w~~-~tG~gV~VAVIDTGVd~~Hpd 171 (671)
T 1r6v_A 95 SYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGV--TQQLWEE-ASGTNIIVAVVDTGVDGTHPD 171 (671)
T ss_dssp CBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTC--CHHHHHH-CSCTTCEEEEEESCCBTTSGG
T ss_pred CeEEEeccccccCcccccccccccccccccccccccccccCCchhccCC--chhhhhc-cCCCCCEEEEEeCCCCCCCcc
Confidence 987654310 0112455555433 456 887 899999999999999999999
Q ss_pred cccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc-----
Q 040458 153 FNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS----- 227 (732)
Q Consensus 153 f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~----- 227 (732)
|.+. ++..+++..+... ....+..|++||||||||||||.
T Consensus 172 L~~~---------------------------~~~g~~~~~~~~~--------p~~~d~~d~~gHGThVAGiIAa~~ng~g 216 (671)
T 1r6v_A 172 LEGQ---------------------------VIAGYRPAFDEEL--------PAGTDSSYGGSAGTHVAGTIAAKKDGKG 216 (671)
T ss_dssp GTTT---------------------------BCCEEEGGGTEEE--------CTTCBCCTTCSHHHHHHHHHHCCCSSSS
T ss_pred cccc---------------------------EEecccccCCCcC--------CCCCCCccCCCcchhhhhhhhccCCCCc
Confidence 9753 1111111111000 00123456789999999999875
Q ss_pred ---------------------------------------cccCCCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEE
Q 040458 228 ---------------------------------------AVSDGVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSA 268 (732)
Q Consensus 228 ---------------------------------------Ai~dgvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~ 268 (732)
|+++|+||||||||+.. ....+..++.+|.++|++||+
T Consensus 217 v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~---~s~~l~~Ai~~A~~~GvlvVa 293 (671)
T 1r6v_A 217 IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG---YSYTMKEAFDYAMEHGVVMVV 293 (671)
T ss_dssp CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEE
T ss_pred eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---CCHHHHHHHHHHHhCCCEEEE
Confidence 55679999999999742 345788888899999999999
Q ss_pred ecCCCCCCC-CcccccCCCceeecCCCcCcccceeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccC
Q 040458 269 SAGNGGPGG-LTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCL 347 (732)
Q Consensus 269 aAGN~G~~~-~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~ 347 (732)
||||+|... ..+++..|++++|||...+.
T Consensus 294 AAGN~g~~~~~~yPA~~~~VItVgA~d~~g-------------------------------------------------- 323 (671)
T 1r6v_A 294 SAGNNTSDSHHQYPAGYPGVIQVAALDYYG-------------------------------------------------- 323 (671)
T ss_dssp ECCSCSSSCCCCBTTTSTTCEEEEEEEEET--------------------------------------------------
T ss_pred eCCCCCCCCCccCcccCCCeEEEEEEcCCC--------------------------------------------------
Confidence 999999764 45667788999998732100
Q ss_pred CCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCC
Q 040458 348 EGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKS 427 (732)
Q Consensus 348 ~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~ 427 (732)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCCCCCC-----CCCCCCccceeee
Q 040458 428 KSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSG-----IPTDKRKTEFNIL 502 (732)
Q Consensus 428 ~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~-----~~~~~~~~~y~~~ 502 (732)
....++.|||+||.+ ||+|||++|+++++....... .........|..+
T Consensus 324 ------------------~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~ 377 (671)
T 1r6v_A 324 ------------------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYY 377 (671)
T ss_dssp ------------------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEE
T ss_pred ------------------CceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEe
Confidence 001368899999975 999999999999986421100 0001122379999
Q ss_pred cCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCccccCCCCCCCCCCCCCCCcccccccCCCCccccC
Q 040458 503 SGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNPGLIYDL 582 (732)
Q Consensus 503 sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv~d~ 582 (732)
+|||||||||||++|||+|++|+|+|++||++|++||+++.. +..+..||+|+||+.+|++..|..+.
T Consensus 378 sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~------------~g~d~~~G~G~vna~~Al~~~l~~~~ 445 (671)
T 1r6v_A 378 QGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNG------------NGWDHDTGYGLVKLDAALQGPLPTQG 445 (671)
T ss_dssp ESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSS------------SSCBTTTBTCBCCHHHHHHCCCCSSS
T ss_pred cCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCC------------CCCCCCcccceeCHHHHhhhhcCCCC
Confidence 999999999999999999999999999999999999998753 23456899999999999998877665
Q ss_pred Cchhh
Q 040458 583 TSYDY 587 (732)
Q Consensus 583 ~~~dy 587 (732)
...||
T Consensus 446 ~~~~~ 450 (671)
T 1r6v_A 446 GVEEF 450 (671)
T ss_dssp EEEEE
T ss_pred Cccce
Confidence 54444
No 10
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.2e-45 Score=386.01 Aligned_cols=228 Identities=32% Similarity=0.509 Sum_probs=187.3
Q ss_pred ccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccC
Q 040458 114 FLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQG 193 (732)
Q Consensus 114 ~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g 193 (732)
.|++..+.. ..+|..+++|+||+|||||||||++||+|+ +...++|..+
T Consensus 5 ~w~l~~i~~--~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~ 53 (274)
T 1r0r_E 5 PYGIPLIKA--DKVQAQGFKGANVKVAVLDTGIQASHPDLN-----------------------------VVGGASFVAG 53 (274)
T ss_dssp CTHHHHTTH--HHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECSTT
T ss_pred CCchhhcCC--HHHHhcCCCCCCCEEEEEcCCCCCCCHhHc-----------------------------CCCCccccCC
Confidence 477776644 678999999999999999999999999993 2333444331
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------------cccCCCeE
Q 040458 194 YESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------------AVSDGVDV 235 (732)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------Ai~dgvdV 235 (732)
...+.|..||||||||||+|. +++.|++|
T Consensus 54 -------------~~~~~d~~gHGT~vAgiia~~~~~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~V 120 (274)
T 1r0r_E 54 -------------EAYNTDGNGHGTHVAGTVAALDNTTGVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDV 120 (274)
T ss_dssp -------------CCTTCCSSSHHHHHHHHHHCCSSSSBCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSE
T ss_pred -------------CCCCCCCCCCHHHHHHHHHccCCCCceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCE
Confidence 122567899999999999874 67789999
Q ss_pred EEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCC----CcccccCCCceeecCCCcCcccceeEEcCCCeEE
Q 040458 236 VSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGG----LTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKII 311 (732)
Q Consensus 236 InlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~----~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~ 311 (732)
||||||... ..+.+..++.++.++|++||+||||+|... ..+++..|++++||+..
T Consensus 121 in~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~----------------- 180 (274)
T 1r0r_E 121 INMSLGGAS---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD----------------- 180 (274)
T ss_dssp EEECEEBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEEC-----------------
T ss_pred EEeCCCCCC---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEec-----------------
Confidence 999999853 246778888899999999999999999753 23455667777777621
Q ss_pred eeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCC
Q 040458 312 PGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGV 391 (732)
Q Consensus 312 ~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 391 (732)
T Consensus 181 -------------------------------------------------------------------------------- 180 (274)
T 1r0r_E 181 -------------------------------------------------------------------------------- 180 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEE
Q 040458 392 FDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVI 471 (732)
Q Consensus 392 ~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 471 (732)
..+.++.||++||. |||+
T Consensus 181 ------------------------------------------------------~~~~~~~~S~~G~~--------~di~ 198 (274)
T 1r0r_E 181 ------------------------------------------------------SNSNRASFSSVGAE--------LEVM 198 (274)
T ss_dssp ------------------------------------------------------TTSCBCTTCCCSTT--------EEEE
T ss_pred ------------------------------------------------------CCCCcCccCCCCCC--------ceEE
Confidence 12356889999985 4999
Q ss_pred eCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCcccc
Q 040458 472 APGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMID 551 (732)
Q Consensus 472 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~ 551 (732)
|||++|+++++.+ .|..++|||||||||||++|||+|++|.|++++||++|++||+++.
T Consensus 199 APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-------- 257 (274)
T 1r0r_E 199 APGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG-------- 257 (274)
T ss_dssp EECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS--------
T ss_pred eCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC--------
Confidence 9999999998875 8999999999999999999999999999999999999999999763
Q ss_pred CCCCCCCCCCCCCCCcccccccCC
Q 040458 552 ESTGNTSTALDFGAGHVHPQKAMN 575 (732)
Q Consensus 552 ~~~~~~~~~~~~G~G~vd~~~A~~ 575 (732)
++..||+|+||+.+|++
T Consensus 258 -------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 -------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -------CHHHHTTCBCCHHHHTC
T ss_pred -------CCCCcccCccCHHHHhC
Confidence 34589999999999985
No 11
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.5e-45 Score=383.80 Aligned_cols=227 Identities=33% Similarity=0.518 Sum_probs=189.8
Q ss_pred ccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccC
Q 040458 114 FLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQG 193 (732)
Q Consensus 114 ~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g 193 (732)
.|++..+.. ..+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 5 ~W~l~~i~~--~~a~~~g~~G~gv~VaViDtGi-~~h~~l~-----------------------------~~~~~~~~~~ 52 (269)
T 1gci_A 5 PWGISRVQA--PAAHNRGLTGSGVKVAVLDTGI-STHPDLN-----------------------------IRGGASFVPG 52 (269)
T ss_dssp CHHHHHTTH--HHHHHTTCSCTTCEEEEEESCC-CCCTTCC-----------------------------EEEEEECSTT
T ss_pred CcChhhcCc--HHHHhcCCCCCCCEEEEECCCC-CCCHhhc-----------------------------ccCCcccCCC
Confidence 477776644 6789999999999999999999 8999993 2333444331
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------------cccCCCeE
Q 040458 194 YESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------------AVSDGVDV 235 (732)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------Ai~dgvdV 235 (732)
...+.|+.||||||||||+|. +++.|++|
T Consensus 53 -------------~~~~~d~~gHGT~vAgiia~~~~~~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~V 119 (269)
T 1gci_A 53 -------------EPSTQDGNGHGTHVAGTIAALNNSIGVLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHV 119 (269)
T ss_dssp -------------CCSCSCSSSHHHHHHHHHHCCCSSSBCCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSE
T ss_pred -------------CCCCCCCCCChHHHHHHHhcCcCCCCcEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeE
Confidence 123568899999999999874 66789999
Q ss_pred EEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCcccceeEEcCCCeEEeeee
Q 040458 236 VSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVS 315 (732)
Q Consensus 236 InlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s 315 (732)
||||||... ....+..++.++.++|++||+||||+|.....+++..+++++||+..
T Consensus 120 in~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~--------------------- 175 (269)
T 1gci_A 120 ANLSLGSPS---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATD--------------------- 175 (269)
T ss_dssp EEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC---------------------
T ss_pred EEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeec---------------------
Confidence 999999843 24577888889999999999999999987777777788888888731
Q ss_pred eecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCc
Q 040458 316 VYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGE 395 (732)
Q Consensus 316 ~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~ 395 (732)
T Consensus 176 -------------------------------------------------------------------------------- 175 (269)
T 1gci_A 176 -------------------------------------------------------------------------------- 175 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCC
Q 040458 396 GLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGL 475 (732)
Q Consensus 396 ~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~ 475 (732)
..+.++.||++||.+ ||+|||+
T Consensus 176 --------------------------------------------------~~~~~~~~S~~G~~~--------di~APG~ 197 (269)
T 1gci_A 176 --------------------------------------------------QNNNRASFSQYGAGL--------DIVAPGV 197 (269)
T ss_dssp --------------------------------------------------TTSCBCTTCCCSTTE--------EEEEECS
T ss_pred --------------------------------------------------CCCCCCCCCCCCCCc--------ceEecCC
Confidence 113568899999965 9999999
Q ss_pred cEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCccccCCCC
Q 040458 476 NILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMIDESTG 555 (732)
Q Consensus 476 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~ 555 (732)
+|+++++.+ .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 198 ~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g------------ 252 (269)
T 1gci_A 198 NVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG------------ 252 (269)
T ss_dssp SEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS------------
T ss_pred CeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC------------
Confidence 999998875 8999999999999999999999999999999999999999999763
Q ss_pred CCCCCCCCCCCcccccccCC
Q 040458 556 NTSTALDFGAGHVHPQKAMN 575 (732)
Q Consensus 556 ~~~~~~~~G~G~vd~~~A~~ 575 (732)
++..||+|+||+.+|++
T Consensus 253 ---~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 ---STNLYGSGLVNAEAATR 269 (269)
T ss_dssp ---CHHHHTTCBCCHHHHTC
T ss_pred ---CCCCcccCccCHHHHcC
Confidence 34589999999999985
No 12
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=2.4e-47 Score=413.79 Aligned_cols=271 Identities=22% Similarity=0.228 Sum_probs=170.2
Q ss_pred cccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccCccccCCCCCC
Q 040458 124 AGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQGYESTNGKMNE 203 (732)
Q Consensus 124 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~ 203 (732)
+.++|.++..|+||+|||||||||++||+|++....+....|+..++....... ..+..+.. ....++.........
T Consensus 20 ~~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~ 96 (357)
T 4h6x_A 20 LADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDY-AAFQSIRD--QGLKGKEKEEALEAV 96 (357)
T ss_dssp HHHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHH-HHHHHHHH--HTCCSHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccc-cccccccC--ccccccccccccccc
Confidence 455899999999999999999999999999987666666677665442110000 00000000 000000000000000
Q ss_pred CCCCCCCCCCCCCcccchhhhhcc------------------------------------------cccCCCeEEEecCC
Q 040458 204 TTEFRSPRDSDGHGTHTASIAAGS------------------------------------------AVSDGVDVVSLSVG 241 (732)
Q Consensus 204 ~~~~~~~~D~~gHGTHVAGi~ag~------------------------------------------Ai~dgvdVInlSlG 241 (732)
..+..++.|++||||||||||||+ +++.|++|||||||
T Consensus 97 ~~~~~~~~D~~gHGThVAGiiag~~~~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~Vin~S~G 176 (357)
T 4h6x_A 97 IPDTKDRIVLNDHACHVTSTIVGQEHSPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANIIHCAFC 176 (357)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCTTSSCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSEEEEC--
T ss_pred cCCCCCCcCCCCcHHHHHHHHhccCCCCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCEEeeccc
Confidence 011223457889999999999986 56779999999999
Q ss_pred CCC-CCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCcccceeEEcCCCeEEeeeeeecCC
Q 040458 242 GVV-VPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSVYSGP 320 (732)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~~~~~ 320 (732)
... .....+.+..++.++.++|++||+||||+|.....+++..|++|+|||..
T Consensus 177 ~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~-------------------------- 230 (357)
T 4h6x_A 177 RPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAK-------------------------- 230 (357)
T ss_dssp ---------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEEC--------------------------
T ss_pred cCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEec--------------------------
Confidence 753 23445678888899999999999999999987777778888888888731
Q ss_pred CCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCcccccc
Q 040458 321 GLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEGLVAD 400 (732)
Q Consensus 321 ~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~ 400 (732)
T Consensus 231 -------------------------------------------------------------------------------- 230 (357)
T 4h6x_A 231 -------------------------------------------------------------------------------- 230 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEec
Q 040458 401 CHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAA 480 (732)
Q Consensus 401 ~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 480 (732)
..+.++.|||||+. ..||||+|||++|+++
T Consensus 231 ---------------------------------------------~~~~~~~fSn~G~~-----~~~~di~APG~~i~s~ 260 (357)
T 4h6x_A 231 ---------------------------------------------VDGTPCHFSNWGGN-----NTKEGILAPGEEILGA 260 (357)
T ss_dssp ---------------------------------------------TTSSBCTTCC---C-----TTTTEEEEECSSEEEC
T ss_pred ---------------------------------------------cCCcccccccCCCC-----CCccceeecCCCeEec
Confidence 12357899999975 3589999999999999
Q ss_pred CCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhh----CCCCCHHHHHHHHHhhcccccCCCCccccCCCCC
Q 040458 481 WPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAA----HPDWSPAAIRSALMTTAYTVDNRGETMIDESTGN 556 (732)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~----~p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~ 556 (732)
++.+. .|..++|||||||||||++|||+++ +|.|+++|||++|++||+++... .
T Consensus 261 ~~~~~------------~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~----------~ 318 (357)
T 4h6x_A 261 QPCTE------------EPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE----------V 318 (357)
T ss_dssp CTTCS------------CCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC------------------
T ss_pred cCCCC------------cccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC----------C
Confidence 88752 5778999999999999999999964 56899999999999999987521 2
Q ss_pred CCCCCCCCCCcccccccCC
Q 040458 557 TSTALDFGAGHVHPQKAMN 575 (732)
Q Consensus 557 ~~~~~~~G~G~vd~~~A~~ 575 (732)
...+.+||+|+||+.+|++
T Consensus 319 ~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 319 VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp ------CTTCBCCHHHHHH
T ss_pred CCCcccceeEEecHHHHHH
Confidence 2345689999999999987
No 13
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2.3e-45 Score=385.00 Aligned_cols=230 Identities=33% Similarity=0.518 Sum_probs=187.9
Q ss_pred ccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccC
Q 040458 114 FLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQG 193 (732)
Q Consensus 114 ~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g 193 (732)
.|++..+.. ..+|..+++|+||+|||||||||++||+|+ +...++|..+
T Consensus 5 ~w~l~~i~~--~~~~~~g~~G~gv~VaViDtGid~~h~~l~-----------------------------~~~g~~~~~~ 53 (281)
T 1to2_E 5 PYGVSQIKA--PALHSQGYTGSNVKVAVIDSGIDSSHPDLK-----------------------------VAGGASMVPS 53 (281)
T ss_dssp CHHHHHTTH--HHHHHHTCSCTTCEEEEEESCCCTTCTTCC-----------------------------EEEEEECCTT
T ss_pred CcchhhcCh--HHHHhcCCCCCCCEEEEEcCCCCCCCHHHc-----------------------------CcCCccccCC
Confidence 477776644 678999999999999999999999999994 2233333321
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------------cccCCCeE
Q 040458 194 YESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------------AVSDGVDV 235 (732)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------Ai~dgvdV 235 (732)
+.....|..||||||||||+|. ++++|++|
T Consensus 54 ------------~~~~~~d~~gHGT~vAgiia~~~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~V 121 (281)
T 1to2_E 54 ------------ETNPFQDNNSHGTHVAGTVAALNNSIGVLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDV 121 (281)
T ss_dssp ------------CCCTTCCSSSHHHHHHHHHHCCSSSSSBCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSE
T ss_pred ------------CCCCCCCCCCcHHHHHHHHhccCCCCcceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcE
Confidence 0112367899999999999874 67789999
Q ss_pred EEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCC----CcccccCCCceeecCCCcCcccceeEEcCCCeEE
Q 040458 236 VSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGG----LTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKII 311 (732)
Q Consensus 236 InlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~----~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~ 311 (732)
||||||... ....+..++.++.++|++||+||||+|... ..+++..|++++||+..
T Consensus 122 in~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~----------------- 181 (281)
T 1to2_E 122 INMSLGGPS---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD----------------- 181 (281)
T ss_dssp EEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC-----------------
T ss_pred EEECCcCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec-----------------
Confidence 999999843 246788888899999999999999999763 23455667777777621
Q ss_pred eeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCC
Q 040458 312 PGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGV 391 (732)
Q Consensus 312 ~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 391 (732)
T Consensus 182 -------------------------------------------------------------------------------- 181 (281)
T 1to2_E 182 -------------------------------------------------------------------------------- 181 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEE
Q 040458 392 FDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVI 471 (732)
Q Consensus 392 ~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 471 (732)
..+.++.||++||.+ ||+
T Consensus 182 ------------------------------------------------------~~~~~~~fS~~G~~~--------di~ 199 (281)
T 1to2_E 182 ------------------------------------------------------SSNQRASFSSVGPEL--------DVM 199 (281)
T ss_dssp ------------------------------------------------------TTSCBCTTCCCSTTC--------CEE
T ss_pred ------------------------------------------------------CCCCcCCcCCCCCCc--------eEE
Confidence 123578899999964 999
Q ss_pred eCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCcccc
Q 040458 472 APGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMID 551 (732)
Q Consensus 472 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~ 551 (732)
|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 200 APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g-------- 258 (281)
T 1to2_E 200 APGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG-------- 258 (281)
T ss_dssp EECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS--------
T ss_pred ecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC--------
Confidence 9999999998875 8999999999999999999999999999999999999999999763
Q ss_pred CCCCCCCCCCCCCCCcccccccCCC
Q 040458 552 ESTGNTSTALDFGAGHVHPQKAMNP 576 (732)
Q Consensus 552 ~~~~~~~~~~~~G~G~vd~~~A~~~ 576 (732)
+++.||+|+||+.+|+++
T Consensus 259 -------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 -------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp -------CHHHHTTCBCCHHHHTSS
T ss_pred -------CCCCcccceecHHHHhhh
Confidence 346899999999999985
No 14
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=5.4e-45 Score=382.05 Aligned_cols=230 Identities=33% Similarity=0.404 Sum_probs=184.4
Q ss_pred cccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeeccc
Q 040458 113 QFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQ 192 (732)
Q Consensus 113 ~~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~ 192 (732)
.+|++..+.. ..+|+.+..|+||+|||||||||++||+|.+ +++..++|.+
T Consensus 11 ~~w~l~~i~~--~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~---------------------------~~~~~~~~~~ 61 (280)
T 1dbi_A 11 YQYGPQNTYT--DYAWDVTKGSSGQEIAVIDTGVDYTHPDLDG---------------------------KVIKGYDFVD 61 (280)
T ss_dssp HCCTTGGGTH--HHHTTTCCCCTTCEEEEEESCCCTTSTTTTT---------------------------TEEEEEETTT
T ss_pred CCCChhhcCc--HHHHhhcCCCCCCEEEEEeCCcCCCChhhcc---------------------------CcccceeccC
Confidence 4578877644 6789998888899999999999999999964 3455556554
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------------cccCCC
Q 040458 193 GYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------------AVSDGV 233 (732)
Q Consensus 193 g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------------Ai~dgv 233 (732)
+ ..++.|..||||||||||+|. +++.|+
T Consensus 62 ~-------------~~~~~d~~gHGT~vAgiia~~~~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~ 128 (280)
T 1dbi_A 62 N-------------DYDPMDLNNHGTHVAGIAAAETNNATGIAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGA 128 (280)
T ss_dssp T-------------BSCCCCSSSHHHHHHHHHHCCCSSSSSCCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTC
T ss_pred C-------------CCCCCCCCCcHHHHHHHHhCcCCCCCcceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCC
Confidence 2 134678999999999999875 667899
Q ss_pred eEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCcccceeEEcCCCeEEee
Q 040458 234 DVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPG 313 (732)
Q Consensus 234 dVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~ 313 (732)
+|||||||... ..+.+..++.++.++|++||+||||+|......++..+++++|||..
T Consensus 129 ~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~------------------- 186 (280)
T 1dbi_A 129 EVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVD------------------- 186 (280)
T ss_dssp SEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEEC-------------------
T ss_pred CEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeC-------------------
Confidence 99999999842 34677888889999999999999999987666777788888888731
Q ss_pred eeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCC
Q 040458 314 VSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFD 393 (732)
Q Consensus 314 ~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 393 (732)
T Consensus 187 -------------------------------------------------------------------------------- 186 (280)
T 1dbi_A 187 -------------------------------------------------------------------------------- 186 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeC
Q 040458 394 GEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAP 473 (732)
Q Consensus 394 ~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~AP 473 (732)
..+.++.||++||.+ ||+||
T Consensus 187 ----------------------------------------------------~~~~~~~~S~~G~~~--------dv~Ap 206 (280)
T 1dbi_A 187 ----------------------------------------------------QYDRLASFSNYGTWV--------DVVAP 206 (280)
T ss_dssp ----------------------------------------------------TTSCBCTTBCCSTTC--------CEEEE
T ss_pred ----------------------------------------------------CCCCcCCCCCCCCCc--------eEEEe
Confidence 113568899999864 99999
Q ss_pred CCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCccccCC
Q 040458 474 GLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMIDES 553 (732)
Q Consensus 474 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~ 553 (732)
|++|+++++.+ .|..++|||||||||||++|||++ |.+++.+||++|++||+++..
T Consensus 207 G~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~--------- 262 (280)
T 1dbi_A 207 GVDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG--------- 262 (280)
T ss_dssp CSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT---------
T ss_pred cCCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC---------
Confidence 99999998865 899999999999999999999987 899999999999999998752
Q ss_pred CCCCCCCCCCCCCcccccccCC
Q 040458 554 TGNTSTALDFGAGHVHPQKAMN 575 (732)
Q Consensus 554 ~~~~~~~~~~G~G~vd~~~A~~ 575 (732)
....||+|+||+.+|++
T Consensus 263 -----~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 -----TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----BTTTBSSEECCHHHHHT
T ss_pred -----CCCcccCCEECHHHHhc
Confidence 12479999999999986
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=3.2e-45 Score=392.15 Aligned_cols=238 Identities=28% Similarity=0.402 Sum_probs=189.8
Q ss_pred CCcccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeec
Q 040458 111 SPQFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFF 190 (732)
Q Consensus 111 s~~~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~ 190 (732)
....|++..+.. ..+|..+++|+||+|||||||||++||+|.+ +++..++|
T Consensus 19 ~~~~w~l~~i~~--~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~ 69 (327)
T 2x8j_A 19 SEVPMGVEIVEA--PAVWRASAKGAGQIIGVIDTGCQVDHPDLAE---------------------------RIIGGVNL 69 (327)
T ss_dssp BSCCHHHHHTTH--HHHHHHHGGGTTCEEEEEESCCCTTCTTTGG---------------------------GEEEEEEC
T ss_pred cccCcchhhcCh--HHHHhcCCCCCCCEEEEEcCCCCCCChhHhh---------------------------cccCCccc
Confidence 445688877644 7799999999999999999999999999964 35566666
Q ss_pred ccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------------ccc--
Q 040458 191 SQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------------AVS-- 230 (732)
Q Consensus 191 ~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------Ai~-- 230 (732)
..++.. +...+.|+.||||||||||+|+ +++
T Consensus 70 ~~~~~~---------~~~~~~d~~gHGT~VAgiia~~~~~~g~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~ 140 (327)
T 2x8j_A 70 TTDYGG---------DETNFSDNNGHGTHVAGTVAAAETGSGVVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWR 140 (327)
T ss_dssp SSGGGG---------CTTCCCCSSSHHHHHHHHHHCCCCSSBCCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCC
T ss_pred cCCCCC---------CCCCCCCCCCchHHHHHHHhccCCCCCcEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhc
Confidence 654321 1123578999999999999874 555
Q ss_pred ----CCCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCC-----CcccccCCCceeecCCCcCcccce
Q 040458 231 ----DGVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGG-----LTVTNVAPWVTTVGAGTIDRDFPA 301 (732)
Q Consensus 231 ----dgvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~-----~~~~~~~p~v~tVga~~~~~~~~~ 301 (732)
.+++|||||||... ....+..++.+|.++|++||+||||+|... ..+++..+++|+|||..
T Consensus 141 ~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~------- 210 (327)
T 2x8j_A 141 GPKGEQMRIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVD------- 210 (327)
T ss_dssp CTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEEC-------
T ss_pred ccccCCceEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEEC-------
Confidence 89999999999743 246778888899999999999999999652 34556677888887731
Q ss_pred eEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcC
Q 040458 302 DVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAG 381 (732)
Q Consensus 302 ~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~G 381 (732)
T Consensus 211 -------------------------------------------------------------------------------- 210 (327)
T 2x8j_A 211 -------------------------------------------------------------------------------- 210 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCC
Q 040458 382 GVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPE 461 (732)
Q Consensus 382 a~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~ 461 (732)
..+.++.||++||.
T Consensus 211 ----------------------------------------------------------------~~~~~~~fS~~G~~-- 224 (327)
T 2x8j_A 211 ----------------------------------------------------------------FDLRLSDFTNTNEE-- 224 (327)
T ss_dssp ----------------------------------------------------------------TTCCBSCC---CCC--
T ss_pred ----------------------------------------------------------------CCCCCCCccCCCCC--
Confidence 11357889999985
Q ss_pred CCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhh-----CCCCCHHHHHHHHH
Q 040458 462 TPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAA-----HPDWSPAAIRSALM 536 (732)
Q Consensus 462 ~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~-----~p~~sp~~ik~~L~ 536 (732)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.+++.+||++|+
T Consensus 225 ------~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~ 285 (327)
T 2x8j_A 225 ------IDIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLV 285 (327)
T ss_dssp ------CSEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred ------ceEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHH
Confidence 59999999999998875 7999999999999999999999999 99999999999999
Q ss_pred hhcccccCCCCccccCCCCCCCCCCCCCCCcccccccCC
Q 040458 537 TTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMN 575 (732)
Q Consensus 537 ~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~ 575 (732)
+||+++. .++..||+|+||+.+|++
T Consensus 286 ~tA~~~g--------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 286 RRATPIG--------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp TTEECCS--------------SCHHHHTTCEECTTHHHH
T ss_pred HhCccCC--------------CCCCceeeeEECHHHHHH
Confidence 9999763 245699999999999987
No 16
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=2.6e-44 Score=376.92 Aligned_cols=229 Identities=33% Similarity=0.448 Sum_probs=189.0
Q ss_pred cccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeeccc
Q 040458 113 QFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQ 192 (732)
Q Consensus 113 ~~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~ 192 (732)
..|++..+.. ..+|+.. +|+||+|||||||||++||+|.+ +++..++|.+
T Consensus 11 ~~w~l~~i~~--~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~ 60 (279)
T 1thm_A 11 RQYGPQKIQA--PQAWDIA-EGSGAKIAIVDTGVQSNHPDLAG---------------------------KVVGGWDFVD 60 (279)
T ss_dssp HCCHHHHTTH--HHHHTTC-CCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEETTT
T ss_pred cccChhhCCh--HHHHhcC-CCCCCEEEEEccCCCCCCcchhc---------------------------CccccccccC
Confidence 4577766543 6689886 79999999999999999999964 3555566654
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------------cccCCC
Q 040458 193 GYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------------AVSDGV 233 (732)
Q Consensus 193 g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------------Ai~dgv 233 (732)
+ ...+.|..||||||||||+|. ++++|+
T Consensus 61 ~-------------~~~~~d~~gHGT~vAgiia~~~~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~ 127 (279)
T 1thm_A 61 N-------------DSTPQNGNGHGTHCAGIAAAVTNNSTGIAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGA 127 (279)
T ss_dssp T-------------BSCCCCSSSHHHHHHHHHHCCCSSSSSCCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTC
T ss_pred C-------------CCCCCCCCCcHHHHHHHHhCccCCCCccEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCC
Confidence 2 134678899999999999874 677899
Q ss_pred eEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCcccceeEEcCCCeEEee
Q 040458 234 DVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPG 313 (732)
Q Consensus 234 dVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~ 313 (732)
+|||||||... ..+.+..++.++.++|++||+||||+|.....+++..+++++||+..
T Consensus 128 ~Vin~S~G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~------------------- 185 (279)
T 1thm_A 128 KVISLSLGGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTD------------------- 185 (279)
T ss_dssp SEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEEC-------------------
T ss_pred CEEEEecCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeC-------------------
Confidence 99999999852 24577888889999999999999999987666777778888887631
Q ss_pred eeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCC
Q 040458 314 VSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFD 393 (732)
Q Consensus 314 ~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 393 (732)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 1thm_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeC
Q 040458 394 GEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAP 473 (732)
Q Consensus 394 ~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~AP 473 (732)
..+.++.||++||.+ ||+||
T Consensus 186 ----------------------------------------------------~~~~~~~fS~~G~~~--------dv~AP 205 (279)
T 1thm_A 186 ----------------------------------------------------QNDNKSSFSTYGSWV--------DVAAP 205 (279)
T ss_dssp ----------------------------------------------------TTSCBCTTCCCCTTC--------CEEEE
T ss_pred ----------------------------------------------------CCCCcCCcCCCCCce--------EEEEc
Confidence 113568899999864 99999
Q ss_pred CCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCccccCC
Q 040458 474 GLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMIDES 553 (732)
Q Consensus 474 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~ 553 (732)
|++|+++++.+ .|..++|||||||||||++||| ++|.+++++||++|++||+++...
T Consensus 206 G~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-------- 262 (279)
T 1thm_A 206 GSSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-------- 262 (279)
T ss_dssp CSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB--------
T ss_pred CCCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC--------
Confidence 99999999875 8999999999999999999999 589999999999999999987521
Q ss_pred CCCCCCCCCCCCCcccccccCC
Q 040458 554 TGNTSTALDFGAGHVHPQKAMN 575 (732)
Q Consensus 554 ~~~~~~~~~~G~G~vd~~~A~~ 575 (732)
...||+|+||+.+|++
T Consensus 263 ------~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 ------GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ------TTTBSSEECCHHHHHH
T ss_pred ------CccccCCeeCHHHHhc
Confidence 1479999999999975
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=3e-43 Score=375.09 Aligned_cols=253 Identities=29% Similarity=0.366 Sum_probs=194.0
Q ss_pred cccCCcCCCCccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeeccc
Q 040458 113 QFLGLKSSSDSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQ 192 (732)
Q Consensus 113 ~~~gl~~~~~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~ 192 (732)
..|++..+.. ..+|..+.+|+||+|||||||||++||+|.+ ++...++|..
T Consensus 6 ~~W~l~~i~~--~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~---------------------------~~~~~~~~~~ 56 (310)
T 2ixt_A 6 IPWGIKAIYN--NDTLTSTTGGSGINIAVLDTGVNTSHPDLVN---------------------------NVEQCKDFTG 56 (310)
T ss_dssp SCHHHHHHHT--CTTCCCCCCCTTCEEEEEESCCCTTCTTTTT---------------------------TEEEEEESSS
T ss_pred CCCchhhcCc--hhhhhccCCCCCcEEEEEecCCCCCCHHHhh---------------------------cccccccccC
Confidence 3567766543 6689999999999999999999999999964 2444555554
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc----------------------------------------cccCC
Q 040458 193 GYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS----------------------------------------AVSDG 232 (732)
Q Consensus 193 g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~----------------------------------------Ai~dg 232 (732)
... .......|+.||||||||||+|+ +++++
T Consensus 57 ~~~---------~~~~~~~d~~gHGT~vAgiia~~~~~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~ 127 (310)
T 2ixt_A 57 ATT---------PINNSCTDRNGHGTHVAGTALADGGSDQAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQA 127 (310)
T ss_dssp SSS---------CEETCCCCSSSHHHHHHHHHHCBCCTTSCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHH
T ss_pred CCC---------CCCCCCCCCCCCHHHHHHHHhccCCCCCCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhh
Confidence 210 11123568899999999999863 45556
Q ss_pred C-----eEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCC--CcccccCCCceeecCCCcCcccceeEEc
Q 040458 233 V-----DVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGG--LTVTNVAPWVTTVGAGTIDRDFPADVHL 305 (732)
Q Consensus 233 v-----dVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~--~~~~~~~p~v~tVga~~~~~~~~~~~~~ 305 (732)
+ +|||||||... ....+..++.++.++|++||+||||+|... ..+++..|++++||+......
T Consensus 128 ~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~------- 197 (310)
T 2ixt_A 128 TATGTKTIISMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ------- 197 (310)
T ss_dssp HHHTCCEEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE-------
T ss_pred hccCCCeEEEEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc-------
Confidence 6 99999999853 245678888899999999999999999763 345667788999987320000
Q ss_pred CCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEE
Q 040458 306 GNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGM 385 (732)
Q Consensus 306 ~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 385 (732)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCC---
Q 040458 386 ILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPET--- 462 (732)
Q Consensus 386 i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~--- 462 (732)
.....++.||++||....
T Consensus 198 -----------------------------------------------------------~g~~~~~~~S~~G~~~~~g~~ 218 (310)
T 2ixt_A 198 -----------------------------------------------------------NGTYRVADYSSRGYISTAGDY 218 (310)
T ss_dssp -----------------------------------------------------------TTEEEECTTSCCCCTTTTTSS
T ss_pred -----------------------------------------------------------CCCeeeccccCCCCccCCccc
Confidence 000146789999995421
Q ss_pred -CCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhccc
Q 040458 463 -PEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYT 541 (732)
Q Consensus 463 -~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~ 541 (732)
..+.||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|.|++.+||++|++||++
T Consensus 219 ~~~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~ 285 (310)
T 2ixt_A 219 VIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKS 285 (310)
T ss_dssp SCCTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHT
T ss_pred cccCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcc
Confidence 1345999999999999998865 79999999999999999999999999999999999999999998
Q ss_pred ccCCCCccccCCCCCCCCCCCCCCCcccc
Q 040458 542 VDNRGETMIDESTGNTSTALDFGAGHVHP 570 (732)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~G~G~vd~ 570 (732)
++..+. ....+..++.+|+|++|+
T Consensus 286 ~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 286 VDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp SCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred cCCCCC-----cccccCCccccccceeec
Confidence 764321 122456778999999986
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=3.3e-44 Score=377.27 Aligned_cols=228 Identities=29% Similarity=0.323 Sum_probs=178.6
Q ss_pred CCCC-CccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccCccccCCCCCCCCCCCC
Q 040458 131 SDFG-SDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQGYESTNGKMNETTEFRS 209 (732)
Q Consensus 131 ~~~G-~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~ 209 (732)
.++| +||+|||||||||++||+|++. ++..+++... .....
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~---------------------------~~~~~~~~~~-----------~~~~~ 44 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA---------------------------DLTVLPTLAP-----------TAARS 44 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC---------------------------EEEECCCSSC-----------CCCCT
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC---------------------------eeecCcCCCC-----------CCCCC
Confidence 3578 6999999999999999999753 1111111110 01122
Q ss_pred CCCCCCCcccchhhhhcc--------------------------------------cccCCCeEEEecCCCCCC-CCccc
Q 040458 210 PRDSDGHGTHTASIAAGS--------------------------------------AVSDGVDVVSLSVGGVVV-PYFLD 250 (732)
Q Consensus 210 ~~D~~gHGTHVAGi~ag~--------------------------------------Ai~dgvdVInlSlG~~~~-~~~~~ 250 (732)
..|.+||||||||||+|+ +++.|++|||||||.... .....
T Consensus 45 d~~~~gHGT~VAGiiag~~~~~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~ 124 (282)
T 3zxy_A 45 DGFMSAHGTHVASIIFGQPETSVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADG 124 (282)
T ss_dssp TCHHHHHHHHHHHHHHCCTTSSSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCH
T ss_pred CCCCCCcccceeehhhccCCceeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccH
Confidence 335679999999999986 677899999999997532 23345
Q ss_pred HHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCcccceeEEcCCCeEEeeeeeecCCCCCCCceEEE
Q 040458 251 AIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSVYSGPGLKKDQMYSL 330 (732)
Q Consensus 251 ~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~l 330 (732)
.+..++..+.++|+++|+||||+|......+...|++++|||..
T Consensus 125 ~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~------------------------------------ 168 (282)
T 3zxy_A 125 WLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMD------------------------------------ 168 (282)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEEC------------------------------------
T ss_pred HHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEc------------------------------------
Confidence 67778888999999999999999988777788888999998731
Q ss_pred EEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCccccccCCcccEEEEc
Q 040458 331 VYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVG 410 (732)
Q Consensus 331 v~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~ 410 (732)
T Consensus 169 -------------------------------------------------------------------------------- 168 (282)
T 3zxy_A 169 -------------------------------------------------------------------------------- 168 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCCCCCCC
Q 040458 411 AASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGI 490 (732)
Q Consensus 411 ~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~ 490 (732)
..+.++.||+||+. ..||||+|||.+|+++++.+
T Consensus 169 -----------------------------------~~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~------ 202 (282)
T 3zxy_A 169 -----------------------------------DHGHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG------ 202 (282)
T ss_dssp -----------------------------------TTSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS------
T ss_pred -----------------------------------CCCccccccCCCCC-----ccccceeccCcceeeecCCC------
Confidence 11356789999875 45889999999999999876
Q ss_pred CCCCCccceeeecCcccchhHHHHHHHHHHhhC----CCCCHHHHHHHHHhhcccccCCCCccccCCCCCCCCCCCCCCC
Q 040458 491 PTDKRKTEFNILSGTSMACPHVSGLAALLKAAH----PDWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTALDFGAG 566 (732)
Q Consensus 491 ~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~----p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G 566 (732)
.|..++|||||||||||++|||+|++ |.++|++||++|++||++++. ..+.....||+|
T Consensus 203 -------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~----------~~~~~~~~~G~G 265 (282)
T 3zxy_A 203 -------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDD----------DAPEQARRCLAG 265 (282)
T ss_dssp -------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGGGTTC
T ss_pred -------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCC----------CCCCccCceeee
Confidence 79999999999999999999999874 789999999999999997642 233455689999
Q ss_pred cccccccCC
Q 040458 567 HVHPQKAMN 575 (732)
Q Consensus 567 ~vd~~~A~~ 575 (732)
+||+.+|++
T Consensus 266 ~ln~~~A~~ 274 (282)
T 3zxy_A 266 RLNVSGAFT 274 (282)
T ss_dssp BCCHHHHHH
T ss_pred EeCHHHHHH
Confidence 999999986
No 19
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=3.3e-43 Score=419.63 Aligned_cols=322 Identities=23% Similarity=0.229 Sum_probs=220.2
Q ss_pred CCCCCCcccchhhhhcc----------------------------------------ccc-----CCCeEEEecCCCCCC
Q 040458 211 RDSDGHGTHTASIAAGS----------------------------------------AVS-----DGVDVVSLSVGGVVV 245 (732)
Q Consensus 211 ~D~~gHGTHVAGi~ag~----------------------------------------Ai~-----dgvdVInlSlG~~~~ 245 (732)
.|++||||||||||||. |++ .|++|||||||....
T Consensus 267 ~D~~GHGThVAGIIAa~~N~~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~~ 346 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNHSSRDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHAN 346 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCCSSSSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCCS
T ss_pred CCCCCcHHHHHHHHhcCCCCCCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCCC
Confidence 57899999999999986 444 699999999999754
Q ss_pred CCcccHHHHHHHhhh-cCCceEEEecCCCCCCCCcc--cc--cCCCceeecCCCcCcccceeEEcCCCeEEeeeeeecCC
Q 040458 246 PYFLDAIAIAAFGAS-DHGVFVSASAGNGGPGGLTV--TN--VAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSVYSGP 320 (732)
Q Consensus 246 ~~~~~~~~~~~~~a~-~~Gi~vV~aAGN~G~~~~~~--~~--~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~~~~~ 320 (732)
....+.+..++.+|. ++|++||+||||+|+...++ ++ ..+++|+|||...........
T Consensus 347 ~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~y----------------- 409 (1354)
T 3lxu_X 347 WSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEY----------------- 409 (1354)
T ss_dssp CSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-------------------
T ss_pred CCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccc-----------------
Confidence 444567888888886 89999999999999865443 44 379999999853221100000
Q ss_pred CCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCcccccc
Q 040458 321 GLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEGLVAD 400 (732)
Q Consensus 321 ~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~ 400 (732)
. .
T Consensus 410 --------s---------------------~------------------------------------------------- 411 (1354)
T 3lxu_X 410 --------A---------------------M------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------c---------------------c-------------------------------------------------
Confidence 0 0
Q ss_pred CCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEec
Q 040458 401 CHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAA 480 (732)
Q Consensus 401 ~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 480 (732)
.....+.++.|||+||+.+ +++||||+|||++|+++
T Consensus 412 ------------------------------------------~~~~~g~~asFSS~GPt~d--g~~KpDIaAPG~~I~St 447 (1354)
T 3lxu_X 412 ------------------------------------------REKLPGNVYTWTSRDPCID--GGQGVTVCAPGGAIASV 447 (1354)
T ss_dssp ------------------------------------------------CCCCCCCCSCCSS--SSCCEEEEEEC------
T ss_pred ------------------------------------------ccCCCCccccccCCCCCcc--CCCcceEEecCceEEEe
Confidence 0001146799999999986 89999999999999998
Q ss_pred CCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHh----hCCCCCHHHHHHHHHhhcccccCCCCccccCCCCC
Q 040458 481 WPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKA----AHPDWSPAAIRSALMTTAYTVDNRGETMIDESTGN 556 (732)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q----~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~ 556 (732)
.....+ .|..++|||||||||||++|||++ .+|.|++.+||++|++||+++..
T Consensus 448 ~~~~~~-----------~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~------------ 504 (1354)
T 3lxu_X 448 PQFTMS-----------KSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY------------ 504 (1354)
T ss_dssp --------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT------------
T ss_pred ecCCCC-----------ceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC------------
Confidence 664322 799999999999999999999986 79999999999999999998742
Q ss_pred CCCCCCCCCCcccccccCCCCccccCCchhhhhhhhccCCCcc-ceEEEeccccccCCCCCCCCCCccCCCceEEEEeec
Q 040458 557 TSTALDFGAGHVHPQKAMNPGLIYDLTSYDYVNFLCNSNYTVN-NIQVITRRKADCSGATRAGHVGNLNYPSLSAVFQQY 635 (732)
Q Consensus 557 ~~~~~~~G~G~vd~~~A~~~~lv~d~~~~dy~~~lc~~~~~~~-~~~~~~~~~~~c~~~~~~~~~~~ln~psi~~~~~~~ 635 (732)
.+++.||+|+||+.+|++..+.++..+++|+.|+|..++... .| +.+.. ..+....
T Consensus 505 -~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgI--ylR~~---------------~~~~~~~----- 561 (1354)
T 3lxu_X 505 -VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGI--HLRQG---------------VQRNSID----- 561 (1354)
T ss_dssp -SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSE--EECSS---------------CCCSCEE-----
T ss_pred -CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCce--EEecc---------------ccCCceE-----
Confidence 345689999999999999999999999999999999886322 22 11110 0011000
Q ss_pred CCcceeEEEEEEEEecC---CC-CceE--EEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEcccccCCCCCCceEE
Q 040458 636 GKHKMSTHFIRTVTNVG---DP-NSAY--KVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSMKSG 709 (732)
Q Consensus 636 ~~~~~~~~~~rtvtn~~---~~-~~ty--~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~~~G 709 (732)
.+.+++-+..|.. .. ...| ++.+.... --|. .|+.|.+ .++.++|.|+|+.+. .+ -+..++
T Consensus 562 ----~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp~~---L~--~G~h~~ 628 (1354)
T 3lxu_X 562 ----YNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDPTG---LQ--PGVHSA 628 (1354)
T ss_dssp ----EEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECGGG---CC--SEEEEE
T ss_pred ----EEEEEeeeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECCCC---CC--CcceeE
Confidence 2334444442211 11 1122 23333222 1233 4887776 788999999999876 33 367899
Q ss_pred EEEEEC-----CccEEEeEEEEEecC
Q 040458 710 KIVWSD-----GKHNVTSPIVVTMQQ 730 (732)
Q Consensus 710 ~i~~~~-----~~~~vr~P~~~~~~~ 730 (732)
.|..-| .+...|+||.|....
T Consensus 629 ~v~~~D~~~~~~gp~f~ipvTv~~P~ 654 (1354)
T 3lxu_X 629 VIRAYDTDCVQKGSLFEIPVTVVQPH 654 (1354)
T ss_dssp EEEEEESSCTTSCCSEEEEEEEEECB
T ss_pred EEEEEEcCCcccCceEEeeEEEEeee
Confidence 999765 369999999876543
No 20
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=3.7e-44 Score=388.10 Aligned_cols=249 Identities=20% Similarity=0.143 Sum_probs=191.9
Q ss_pred CcccCCcCCCCccccccccCCCCC--ccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeee
Q 040458 112 PQFLGLKSSSDSAGLLLKESDFGS--DLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARF 189 (732)
Q Consensus 112 ~~~~gl~~~~~~~~~~~~~~~~G~--GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~ 189 (732)
...|++..+.. ..+|+. .+|+ ||+||||||||| +||+|.+ +++..++
T Consensus 22 ~~~W~l~~i~~--~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~---------------------------~~~~~~~ 70 (347)
T 2iy9_A 22 EKPWYFDAIGL--TETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSD---------------------------SEFAKFS 70 (347)
T ss_dssp -CCHHHHHHTC--CHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTT---------------------------CEEEEEE
T ss_pred ccCcchhhCCh--HHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhc---------------------------CcccCCc
Confidence 34577766543 668988 8999 999999999999 9999964 3445555
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------cccC------
Q 040458 190 FSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------AVSD------ 231 (732)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------Ai~d------ 231 (732)
|... +. ..+...+.|+.||||||||||+|+ ++++
T Consensus 71 ~~~~-----~~---~~~~~~~~d~~gHGT~vAgiia~~~g~~GvAp~a~l~~~~v~~~~~~~~~~~ai~~a~~~~~~~~~ 142 (347)
T 2iy9_A 71 FTQD-----GS---PFPVKKSEALYIHGTAMASLIASRYGIYGVYPHALISSRRVIPDGVQDSWIRAIESIMSNVFLAPG 142 (347)
T ss_dssp CBTT-----CC---SSCCSSSHHHHHHHHHHHHHHHCSSSSCCSSTTCEEEEEECCSSBCTTHHHHHHHHHHTCTTSCTT
T ss_pred ccCC-----CC---CCCCCCCCCCCCcHHHHHHHHhcccCCcccCCCCEEEEEEEecCCCHHHHHHHHHHHHhhhhcccC
Confidence 5442 00 011124567899999999999883 6677
Q ss_pred CCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCC-------CCcccccCC----------CceeecCCC
Q 040458 232 GVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPG-------GLTVTNVAP----------WVTTVGAGT 294 (732)
Q Consensus 232 gvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~-------~~~~~~~~p----------~v~tVga~~ 294 (732)
|++|||||||........+.+..++..+.++|++||+||||+|.. ...+++..+ ++++|||..
T Consensus 143 ~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~ 222 (347)
T 2iy9_A 143 EEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALA 222 (347)
T ss_dssp EEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEEC
T ss_pred CceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcc
Confidence 999999999975444456778888899999999999999999975 234555566 777776632
Q ss_pred c--CcccceeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcch
Q 040458 295 I--DRDFPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPA 372 (732)
Q Consensus 295 ~--~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~ 372 (732)
. +...
T Consensus 223 ~~~~g~~------------------------------------------------------------------------- 229 (347)
T 2iy9_A 223 QYRKGET------------------------------------------------------------------------- 229 (347)
T ss_dssp CCCTTSC-------------------------------------------------------------------------
T ss_pred cCCCCce-------------------------------------------------------------------------
Confidence 1 0000
Q ss_pred hhHHHHHcCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCcccc
Q 040458 373 KGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVAS 452 (732)
Q Consensus 373 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~ 452 (732)
......++.
T Consensus 230 -----------------------------------------------------------------------~~~~~~~~~ 238 (347)
T 2iy9_A 230 -----------------------------------------------------------------------PVLHGGGIT 238 (347)
T ss_dssp -----------------------------------------------------------------------CCBCCCSSS
T ss_pred -----------------------------------------------------------------------ecccCCCCC
Confidence 000123569
Q ss_pred ccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHH
Q 040458 453 FSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIR 532 (732)
Q Consensus 453 fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik 532 (732)
||++||+ ||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||
T Consensus 239 fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~ 298 (347)
T 2iy9_A 239 GSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATATELK 298 (347)
T ss_dssp CBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHH
T ss_pred CCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 9999995 679999999999999865 79999999999999999999999999999999999
Q ss_pred HHHHhhcccccCCCCccccCCCCCCCCCCCCCCCcccccccCCC
Q 040458 533 SALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNP 576 (732)
Q Consensus 533 ~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 576 (732)
++|++||+++... ....||+|+||+.+|++.
T Consensus 299 ~~L~~tA~~~~~~-------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 299 RTLLESADKYPSL-------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHHHHSEECGGG-------------TTTSGGGEECCHHHHHHH
T ss_pred HHHHHhCccCCCC-------------CCccccCCEecHHHHHHH
Confidence 9999999987521 125999999999999983
No 21
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=6.6e-44 Score=381.39 Aligned_cols=237 Identities=32% Similarity=0.435 Sum_probs=191.2
Q ss_pred cccCCcCCCCccccccccCCCCC--ccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeec
Q 040458 113 QFLGLKSSSDSAGLLLKESDFGS--DLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFF 190 (732)
Q Consensus 113 ~~~gl~~~~~~~~~~~~~~~~G~--GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~ 190 (732)
..|++..+.. ..+|..+ +|+ ||+|||||||||++||+|.+ ++...++|
T Consensus 8 ~~W~l~~i~~--~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~---------------------------~~~~~~~~ 57 (320)
T 2z30_A 8 IPWGIERVKA--PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAA---------------------------NIAWCVST 57 (320)
T ss_dssp CCHHHHHTTC--GGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGG---------------------------GEEEEEEC
T ss_pred CCCChhhcCh--HHHHHhc-CCCcCCeEEEEECCCCCCCChhHhc---------------------------ccccCccc
Confidence 4578777654 7789988 999 99999999999999999964 34444555
Q ss_pred ccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------------cccC-
Q 040458 191 SQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------------AVSD- 231 (732)
Q Consensus 191 ~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------Ai~d- 231 (732)
..+... .+.....|..||||||||||+|. +++.
T Consensus 58 ~~~~~~--------~~~~~~~d~~gHGT~vAgiia~~~n~~g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~ 129 (320)
T 2z30_A 58 LRGKVS--------TKLRDCADQNGHGTHVIGTIAALNNDIGVVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGP 129 (320)
T ss_dssp GGGCCB--------CCHHHHBCSSSHHHHHHHHHHCCSSSBSCCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTT
T ss_pred cCCccC--------CCCCCCCCCCCCHHHHHHHHHcccCCCceEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCc
Confidence 442110 00112367899999999999874 3433
Q ss_pred -------------------CCeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecC
Q 040458 232 -------------------GVDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGA 292 (732)
Q Consensus 232 -------------------gvdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga 292 (732)
+++|||||||... ....+..++.++.++|++||+||||+|.....+++..|++|+|||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga 206 (320)
T 2z30_A 130 DGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGA 206 (320)
T ss_dssp TTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEE
T ss_pred ccccccccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEe
Confidence 9999999999843 245677788889999999999999999877777788889999987
Q ss_pred CCcCcccceeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcch
Q 040458 293 GTIDRDFPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPA 372 (732)
Q Consensus 293 ~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~ 372 (732)
..
T Consensus 207 ~~------------------------------------------------------------------------------ 208 (320)
T 2z30_A 207 ID------------------------------------------------------------------------------ 208 (320)
T ss_dssp EC------------------------------------------------------------------------------
T ss_pred eC------------------------------------------------------------------------------
Confidence 31
Q ss_pred hhHHHHHcCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCcccc
Q 040458 373 KGEVVKKAGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVAS 452 (732)
Q Consensus 373 ~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~ 452 (732)
..+.++.
T Consensus 209 -------------------------------------------------------------------------~~~~~~~ 215 (320)
T 2z30_A 209 -------------------------------------------------------------------------SNDNIAS 215 (320)
T ss_dssp -------------------------------------------------------------------------TTSCBCT
T ss_pred -------------------------------------------------------------------------CCCCcCc
Confidence 1135688
Q ss_pred ccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhC---------
Q 040458 453 FSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAH--------- 523 (732)
Q Consensus 453 fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~--------- 523 (732)
||++|| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++
T Consensus 216 ~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~ 272 (320)
T 2z30_A 216 FSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILP 272 (320)
T ss_dssp TSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccc
Confidence 999986 6899999999999875 89999999999999999999999998
Q ss_pred ----CCCCHHHHHHHHHhhcccccCCCCccccCCCCCCCCCCCCCCCcccccccCCC
Q 040458 524 ----PDWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNP 576 (732)
Q Consensus 524 ----p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~ 576 (732)
|.|++.+||++|++||+++.. +..+..||+|+||+.+|++.
T Consensus 273 ~~~~p~lt~~~v~~~L~~ta~~~~~------------~g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 273 VGTFDDISKNTVRGILHITADDLGP------------TGWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CCCTTCCSTTSHHHHHHHHSBCCSS------------SSSBTTTBTCBCCHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHhhCccCCC------------CCCCCCcCCceeCHHHHHHH
Confidence 999999999999999998742 23456899999999999863
No 22
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.2e-43 Score=377.74 Aligned_cols=235 Identities=29% Similarity=0.338 Sum_probs=185.3
Q ss_pred cccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccCccccCCCCCC
Q 040458 124 AGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQGYESTNGKMNE 203 (732)
Q Consensus 124 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~ 203 (732)
++++|+....++||+|||||||||++||+|.+. .+.+..+|..+
T Consensus 10 ~~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~~---------- 53 (306)
T 4h6w_A 10 LKKLWSETRGDPKICVAVLDGIVDQNHPCFIGA--------------------------DLTRLPSLVSG---------- 53 (306)
T ss_dssp HHHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC--------------------------EEEECC---------------
T ss_pred HHHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC--------------------------cccCCCcccCC----------
Confidence 345899987779999999999999999999753 22222222221
Q ss_pred CCCCCCCCCCCCCcccchhhhhcc--------------------------------------cccCCCeEEEecCCCCC-
Q 040458 204 TTEFRSPRDSDGHGTHTASIAAGS--------------------------------------AVSDGVDVVSLSVGGVV- 244 (732)
Q Consensus 204 ~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------Ai~dgvdVInlSlG~~~- 244 (732)
+.....|.+||||||||||+|+ +++.|++|||+|||...
T Consensus 54 --~~~~~~d~~gHGThVAGiiag~~~~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~ 131 (306)
T 4h6w_A 54 --EANANGSMSTHGTHVASIIFGQHDSPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTD 131 (306)
T ss_dssp -------CCCCHHHHHHHHHHHCCTTSSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEES
T ss_pred --CCCCCCCCCCchHHHHHHHHccccCCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeecccccccc
Confidence 0122347789999999999985 67789999999999753
Q ss_pred CCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCcccccCCCceeecCCCcCcccceeEEcCCCeEEeeeeeecCCCCCC
Q 040458 245 VPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSVYSGPGLKK 324 (732)
Q Consensus 245 ~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~ 324 (732)
.......+..++..+.++|++||++|||+|.....+++..+++++|+|..
T Consensus 132 ~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~------------------------------ 181 (306)
T 4h6w_A 132 AGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMD------------------------------ 181 (306)
T ss_dssp SSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEEC------------------------------
T ss_pred CCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEec------------------------------
Confidence 23344567888889999999999999999987777777788888887731
Q ss_pred CceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCccccccCCcc
Q 040458 325 DQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEGLVADCHVL 404 (732)
Q Consensus 325 ~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~ 404 (732)
T Consensus 182 -------------------------------------------------------------------------------- 181 (306)
T 4h6w_A 182 -------------------------------------------------------------------------------- 181 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCCC
Q 040458 405 PATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDK 484 (732)
Q Consensus 405 p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 484 (732)
..+.++.||++|+. ..||||+|||++|+++++.+
T Consensus 182 -----------------------------------------~~~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~~ 215 (306)
T 4h6w_A 182 -----------------------------------------DQGKPVDFSNWGDA-----YQKQGILAPGKDILGAKPNG 215 (306)
T ss_dssp -----------------------------------------TTSCBCSSSCBCHH-----HHHHEEEEECSSEEEECTTS
T ss_pred -----------------------------------------CCCCccccccccCC-----cCcceeecCCcCcccccCCC
Confidence 11346788999875 45889999999999999876
Q ss_pred CCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhh----CCCCCHHHHHHHHHhhcccccCCCCccccCCCCCCCCC
Q 040458 485 VGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAA----HPDWSPAAIRSALMTTAYTVDNRGETMIDESTGNTSTA 560 (732)
Q Consensus 485 ~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~----~p~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~ 560 (732)
.|..++|||||||||||++|||+++ +|.|+|++||++|++||+++...+ ....
T Consensus 216 -------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~----------~~~~ 272 (306)
T 4h6w_A 216 -------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD----------TDDQ 272 (306)
T ss_dssp -------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------CSCG
T ss_pred -------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------CCCC
Confidence 7999999999999999999999864 699999999999999999875432 2234
Q ss_pred CCCCCCcccccccCC
Q 040458 561 LDFGAGHVHPQKAMN 575 (732)
Q Consensus 561 ~~~G~G~vd~~~A~~ 575 (732)
..||+|+||+.+|++
T Consensus 273 ~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 273 SRCLMGKLNILDAIE 287 (306)
T ss_dssp GGGTTCBCCHHHHHH
T ss_pred CCcceeecCHHHHHH
Confidence 579999999999987
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=9.5e-43 Score=388.06 Aligned_cols=256 Identities=28% Similarity=0.360 Sum_probs=193.3
Q ss_pred ccccc-cCCCCCccEEEEEecCCCC------CCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccCcccc
Q 040458 125 GLLLK-ESDFGSDLVIGVIDTGVWP------ERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQGYEST 197 (732)
Q Consensus 125 ~~~~~-~~~~G~GV~VgVIDTGId~------~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~ 197 (732)
+.+|. .+++|+||+|||||||||+ .||+|.+ +++..++|.+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~---------------------------~i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRG---------------------------KITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTT---------------------------CEEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCC---------------------------CEeeeccccCC----
Confidence 45887 7999999999999999999 7999863 34444555431
Q ss_pred CCCCCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------------cccCCCeEEEec
Q 040458 198 NGKMNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------------AVSDGVDVVSLS 239 (732)
Q Consensus 198 ~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------Ai~dgvdVInlS 239 (732)
..+.|+.||||||||||+|+ +++.|++|||||
T Consensus 60 ----------~~~~d~~gHGT~VAgiiag~g~~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~~Vin~S 129 (434)
T 1wmd_A 60 ----------NNANDTNGHGTHVAGSVLGNGSTNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNS 129 (434)
T ss_dssp ----------TCCCCSSSHHHHHHHHHHCCSSSSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEEC
T ss_pred ----------CCCCCCCCcHHHHHHHHHcCCCCceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCCeEEEec
Confidence 24678899999999999875 456799999999
Q ss_pred CCCCCCCCcccHHHHHHHhh-hcCCceEEEecCCCCCCCC--cccccCCCceeecCCCcCcccceeEEcCCCeEEeeeee
Q 040458 240 VGGVVVPYFLDAIAIAAFGA-SDHGVFVSASAGNGGPGGL--TVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSV 316 (732)
Q Consensus 240 lG~~~~~~~~~~~~~~~~~a-~~~Gi~vV~aAGN~G~~~~--~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~ 316 (732)
||...... .++...++.++ .++|+++|+||||+|.... ..++.++++|+|||....+...
T Consensus 130 ~G~~~~~~-~~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~---------------- 192 (434)
T 1wmd_A 130 WGAAVNGA-YTTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF---------------- 192 (434)
T ss_dssp CCBCCTTC-CCHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG----------------
T ss_pred CCCCcCCc-CCHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc----------------
Confidence 99854211 24555566555 5899999999999997643 4557789999999853211100
Q ss_pred ecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCcc
Q 040458 317 YSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEG 396 (732)
Q Consensus 317 ~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 396 (732)
|.
T Consensus 193 ----------------------------------------------------------------~~-------------- 194 (434)
T 1wmd_A 193 ----------------------------------------------------------------GS-------------- 194 (434)
T ss_dssp ----------------------------------------------------------------CG--------------
T ss_pred ----------------------------------------------------------------Cc--------------
Confidence 00
Q ss_pred ccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCc
Q 040458 397 LVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLN 476 (732)
Q Consensus 397 ~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~ 476 (732)
.....+.++.||++||+.+ +++||||+|||++
T Consensus 195 ----------------------------------------------~~~~~~~~a~fS~~G~~~~--g~~kpdi~ApG~~ 226 (434)
T 1wmd_A 195 ----------------------------------------------YADNINHVAQFSSRGPTKD--GRIKPDVMAPGTF 226 (434)
T ss_dssp ----------------------------------------------GGSCTTSBCTTSCCCCCTT--SCCCCCEEEECSS
T ss_pred ----------------------------------------------ccCCCCccccccCCCCCCC--CCCCceEEcCCCC
Confidence 0011246899999999986 9999999999999
Q ss_pred EEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCC-----CHHHHHHHHHhhcccccCCCCcccc
Q 040458 477 ILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDW-----SPAAIRSALMTTAYTVDNRGETMID 551 (732)
Q Consensus 477 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~-----sp~~ik~~L~~TA~~~~~~~~~~~~ 551 (732)
|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.
T Consensus 227 i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~-------- 297 (434)
T 1wmd_A 227 ILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG-------- 297 (434)
T ss_dssp EEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS--------
T ss_pred eEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC--------
Confidence 99998753210000 00012379999999999999999999999998865 89999999999998753
Q ss_pred CCCCCCCCCCCCCCCcccccccCCCC
Q 040458 552 ESTGNTSTALDFGAGHVHPQKAMNPG 577 (732)
Q Consensus 552 ~~~~~~~~~~~~G~G~vd~~~A~~~~ 577 (732)
...+.+.||||+||+.+|++..
T Consensus 298 ----~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 298 ----LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp ----SCSSCTTTTTCBCCHHHHHTCE
T ss_pred ----CCCCCccCCcCeEeHHHhcccc
Confidence 2346679999999999999754
No 24
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=2e-41 Score=391.68 Aligned_cols=130 Identities=25% Similarity=0.265 Sum_probs=92.3
Q ss_pred CCCccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCC-------CCCC--C------------CCCCCCCccceeeecC
Q 040458 446 PAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPD-------KVGP--S------------GIPTDKRKTEFNILSG 504 (732)
Q Consensus 446 ~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~-------~~~~--~------------~~~~~~~~~~y~~~sG 504 (732)
..+.++.||++||+. ||+|||++|.++.+. +... . ....+.....|..++|
T Consensus 263 ~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sG 334 (600)
T 2oxa_A 263 ADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNG 334 (600)
T ss_dssp TTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECS
T ss_pred CCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCccccccccc
Confidence 446789999999987 999999996554432 1000 0 0000111224899999
Q ss_pred cccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCccc-------------------cCCCCCCCCCCCCCC
Q 040458 505 TSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMI-------------------DESTGNTSTALDFGA 565 (732)
Q Consensus 505 TSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~-------------------~~~~~~~~~~~~~G~ 565 (732)
||||||||||++|||+|++|+|+|++||++|++||++++..+.++. ..........+.|||
T Consensus 335 TS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~ 414 (600)
T 2oxa_A 335 TSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGF 414 (600)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBT
T ss_pred chHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCC
Confidence 9999999999999999999999999999999999999875442211 000111224578999
Q ss_pred CcccccccCCCCccccCC
Q 040458 566 GHVHPQKAMNPGLIYDLT 583 (732)
Q Consensus 566 G~vd~~~A~~~~lv~d~~ 583 (732)
|+||+.+|++...-+..-
T Consensus 415 G~vda~~Av~~A~~~~~~ 432 (600)
T 2oxa_A 415 GLIDVNKALELAANHQPL 432 (600)
T ss_dssp CBCCHHHHHHHHTTCCCC
T ss_pred chhhHHHHHHHHHhcccC
Confidence 999999999865544443
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.4e-41 Score=356.43 Aligned_cols=216 Identities=31% Similarity=0.415 Sum_probs=174.9
Q ss_pred CcccCCcCCCC---ccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeee
Q 040458 112 PQFLGLKSSSD---SAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGAR 188 (732)
Q Consensus 112 ~~~~gl~~~~~---~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~ 188 (732)
...|+|.++.. .+..+|..+.+|+||+|||||||||++||+|.+ +++..+
T Consensus 3 ~~~W~l~~i~~~~~~~~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~ 55 (284)
T 1sh7_A 3 NAIWGLDRIDQRNLPLDRNYNANFDGFGVTAYVIDTGVNNNHEEFGG---------------------------RSVSGY 55 (284)
T ss_dssp SCCHHHHHHTCSSSSCCSBCCCSCCCTTCEEEEEESCCCTTCTTTTT---------------------------CEEEEE
T ss_pred CCCcChhhcCCcccCchhhhhcCCCCCCCEEEEEcCCCCCCChhHcC---------------------------Cccccc
Confidence 34566655433 134589999999999999999999999999964 244455
Q ss_pred ecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------ccc--CCC
Q 040458 189 FFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------AVS--DGV 233 (732)
Q Consensus 189 ~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------Ai~--dgv 233 (732)
+|... ...+.|+.||||||||||+|+ +++ .++
T Consensus 56 ~~~~~-------------~~~~~d~~gHGT~vAgiia~~~~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~ 122 (284)
T 1sh7_A 56 DFVDN-------------DADSSDCNGHGTHVAGTIGGSQYGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGP 122 (284)
T ss_dssp ETTTT-------------BSCCCCSSSHHHHHHHHHHCTTTCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSS
T ss_pred cccCC-------------CCCCCCCCCcHHHHHHHHhcccCCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCC
Confidence 55441 124678999999999999975 333 479
Q ss_pred eEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCC-cccccCCCceeecCCCcCcccceeEEcCCCeEEe
Q 040458 234 DVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGL-TVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIP 312 (732)
Q Consensus 234 dVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~-~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~ 312 (732)
+|||||||.. ....+..++.++.++|++||+||||+|.... ..++..|++++||+..
T Consensus 123 ~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~------------------ 180 (284)
T 1sh7_A 123 SVANMSLGGG----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTT------------------ 180 (284)
T ss_dssp EEEEECCCBS----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEEC------------------
T ss_pred cEEEeCCCCC----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEec------------------
Confidence 9999999984 3467788888999999999999999997542 3456678888887731
Q ss_pred eeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCC
Q 040458 313 GVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVF 392 (732)
Q Consensus 313 ~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 392 (732)
T Consensus 181 -------------------------------------------------------------------------------- 180 (284)
T 1sh7_A 181 -------------------------------------------------------------------------------- 180 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEe
Q 040458 393 DGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIA 472 (732)
Q Consensus 393 ~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~A 472 (732)
..+.++.||++||.+ ||+|
T Consensus 181 -----------------------------------------------------~~~~~~~~S~~G~~~--------di~A 199 (284)
T 1sh7_A 181 -----------------------------------------------------SSDSRSSFSNWGSCV--------DLFA 199 (284)
T ss_dssp -----------------------------------------------------TTSBBCTTCCBSTTC--------CEEE
T ss_pred -----------------------------------------------------CCCCcCcccCCCCcc--------EEEe
Confidence 113568899999975 9999
Q ss_pred CCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhccccc
Q 040458 473 PGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVD 543 (732)
Q Consensus 473 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 543 (732)
||++|+++++.+ .|..++|||||||||||++|||+|++|+++++|||++|++||++..
T Consensus 200 pG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 200 PGSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp ECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred ccCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 999999998875 7999999999999999999999999999999999999999999764
No 26
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=3.6e-42 Score=371.70 Aligned_cols=262 Identities=26% Similarity=0.335 Sum_probs=184.8
Q ss_pred cccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeE---eeeecccCccccCCC
Q 040458 124 AGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLI---GARFFSQGYESTNGK 200 (732)
Q Consensus 124 ~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kii---g~~~~~~g~~~~~~~ 200 (732)
+..+|+.+++|+||+||||||||+ +||+|.+.- +.+..+..........+.+.. ...++.+.+...
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~--- 89 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANV-------LPGYDFISNSQISLDGDGRDADPFDEGDWFDNWACG--- 89 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGB-------CCCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTS---
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccc-------ccCccccCCccccccCCCccCCcccccccccccccc---
Confidence 467999999999999999999998 999997541 111111000000000000000 000000000000
Q ss_pred CCCCCCCCCCCCCCCCcccchhhhhcc--------------------------------------ccc----------CC
Q 040458 201 MNETTEFRSPRDSDGHGTHTASIAAGS--------------------------------------AVS----------DG 232 (732)
Q Consensus 201 ~~~~~~~~~~~D~~gHGTHVAGi~ag~--------------------------------------Ai~----------dg 232 (732)
..+.+.....|..||||||||||+|. ++. .+
T Consensus 90 -~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~~~~~~ 168 (340)
T 3lpc_A 90 -GRPDPRKERSDSSWHGSHVAGTIAAVTNNRIGVAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPENRNP 168 (340)
T ss_dssp -CTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSSCCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSCCCSSC
T ss_pred -CCCCcccCCCCCCCCHHHHHHHHHccCCCCCcceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhcccccccccccCC
Confidence 01122234578999999999999884 333 78
Q ss_pred CeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCC-cccccCCCceeecCCCcCcccceeEEcCCCeEE
Q 040458 233 VDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGL-TVTNVAPWVTTVGAGTIDRDFPADVHLGNGKII 311 (732)
Q Consensus 233 vdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~-~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~ 311 (732)
++|||||||... .....+..++.++.++|++||+||||+|.... ..++..+++|+|||..
T Consensus 169 ~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------------- 229 (340)
T 3lpc_A 169 AKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATT----------------- 229 (340)
T ss_dssp CSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEEC-----------------
T ss_pred CeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCC-----------------
Confidence 999999999742 22345677788889999999999999997643 3566778888887731
Q ss_pred eeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCC
Q 040458 312 PGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGV 391 (732)
Q Consensus 312 ~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 391 (732)
T Consensus 230 -------------------------------------------------------------------------------- 229 (340)
T 3lpc_A 230 -------------------------------------------------------------------------------- 229 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEE
Q 040458 392 FDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVI 471 (732)
Q Consensus 392 ~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 471 (732)
..+.++.||++|| ||||+
T Consensus 230 ------------------------------------------------------~~~~~~~~S~~g~--------~~di~ 247 (340)
T 3lpc_A 230 ------------------------------------------------------SRGIRASFSNYGV--------DVDLA 247 (340)
T ss_dssp ------------------------------------------------------TTSSBCTTCCBST--------TCCEE
T ss_pred ------------------------------------------------------CCCCcCCCCCCCC--------CceEE
Confidence 1135788999997 45999
Q ss_pred eCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhh-C---CCCCHHHHHHHHHhhcccccCCCC
Q 040458 472 APGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAA-H---PDWSPAAIRSALMTTAYTVDNRGE 547 (732)
Q Consensus 472 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~-~---p~~sp~~ik~~L~~TA~~~~~~~~ 547 (732)
|||++|+++++.+... .....|..++|||||||||||++|||+|+ + |.+++++||++|++||+++..
T Consensus 248 ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~--- 318 (340)
T 3lpc_A 248 APGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG--- 318 (340)
T ss_dssp EECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS---
T ss_pred ecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC---
Confidence 9999999998865321 11236999999999999999999999998 5 999999999999999998641
Q ss_pred ccccCCCCCCCCCCCCCCCcccccccCCCC
Q 040458 548 TMIDESTGNTSTALDFGAGHVHPQKAMNPG 577 (732)
Q Consensus 548 ~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~ 577 (732)
.....||+|+||+.+|++..
T Consensus 319 ----------~~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 319 ----------RLDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp ----------CCSSCCCSSBCCHHHHHHHH
T ss_pred ----------CCCCCcccceecHHHHHHHH
Confidence 24459999999999998743
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=2.8e-41 Score=353.71 Aligned_cols=217 Identities=32% Similarity=0.401 Sum_probs=174.6
Q ss_pred CCcccCCcCCCC---ccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEee
Q 040458 111 SPQFLGLKSSSD---SAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGA 187 (732)
Q Consensus 111 s~~~~gl~~~~~---~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~ 187 (732)
++..|+|.++.. .+..+|..+.+|+||+|||||||||++||+|.+. +...
T Consensus 4 ~~~~W~l~~i~~~~~~~~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~ 56 (276)
T 4dzt_A 4 SPAPWGLDRIDQRDLPLSNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVG 56 (276)
T ss_dssp SSCCHHHHHHTSSSSSCCSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEE
T ss_pred CCCCCChhhcCCccCCcccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eecc
Confidence 445566654322 1355899999999999999999999999999642 3444
Q ss_pred eecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------cccC--C
Q 040458 188 RFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------AVSD--G 232 (732)
Q Consensus 188 ~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------Ai~d--g 232 (732)
++|.. ..+.|.+||||||||||+|. +++. +
T Consensus 57 ~~~~~---------------~~~~d~~gHGT~vAgiiag~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~ 121 (276)
T 4dzt_A 57 YDALG---------------GNGQDCNGHGTHVAGTIGGVTYGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRR 121 (276)
T ss_dssp EETTS---------------SCSCCSSSHHHHHHHHHHCTTTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCS
T ss_pred ccCCC---------------CCCCCCCCCHHHHHHHHHccccCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCC
Confidence 44433 23567899999999999876 3333 8
Q ss_pred CeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCCc-ccccCCCceeecCCCcCcccceeEEcCCCeEE
Q 040458 233 VDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGLT-VTNVAPWVTTVGAGTIDRDFPADVHLGNGKII 311 (732)
Q Consensus 233 vdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~-~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~ 311 (732)
++|||||||... ...+..++.++.++|+++|+||||+|..... .++..+.+|+||+..
T Consensus 122 ~~vin~S~g~~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------------- 180 (276)
T 4dzt_A 122 PAVANMSLGGGV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATT----------------- 180 (276)
T ss_dssp SEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-----------------
T ss_pred CeEEEECCCCCC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEEC-----------------
Confidence 999999999732 4678888889999999999999999976443 356677788887621
Q ss_pred eeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCC
Q 040458 312 PGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGV 391 (732)
Q Consensus 312 ~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 391 (732)
T Consensus 181 -------------------------------------------------------------------------------- 180 (276)
T 4dzt_A 181 -------------------------------------------------------------------------------- 180 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEE
Q 040458 392 FDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVI 471 (732)
Q Consensus 392 ~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 471 (732)
..+.++.||++||.. ||+
T Consensus 181 ------------------------------------------------------~~~~~~~~S~~g~~~--------dv~ 198 (276)
T 4dzt_A 181 ------------------------------------------------------SSDARASFSNYGSCV--------DLF 198 (276)
T ss_dssp ------------------------------------------------------TTSBBCTTCCBSTTC--------CEE
T ss_pred ------------------------------------------------------CCCCcCCcCCCCCCc--------eEE
Confidence 123578899999976 999
Q ss_pred eCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhccccc
Q 040458 472 APGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVD 543 (732)
Q Consensus 472 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 543 (732)
|||++|+++++.... .|..++|||||||||||++|||+|++|++++++||++|++||++..
T Consensus 199 ApG~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 199 APGASIPSAWYTSDT-----------ATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp EECSSEEEECTTSSS-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eCCCCeEccccCCCC-----------ceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 999999999887533 7999999999999999999999999999999999999999999864
No 28
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=4.1e-41 Score=352.38 Aligned_cols=217 Identities=32% Similarity=0.391 Sum_probs=173.7
Q ss_pred cccCCcCCCCc---cccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeee
Q 040458 113 QFLGLKSSSDS---AGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARF 189 (732)
Q Consensus 113 ~~~gl~~~~~~---~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~ 189 (732)
..|+|.++... +..+|..+++|+||+|||||||||++||+|.+. +...++
T Consensus 6 ~~W~l~~i~~~~~~~~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d 58 (278)
T 2b6n_A 6 PTWGIDRIDQRNLPLDNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYD 58 (278)
T ss_dssp CCHHHHHHTCSSSSCCSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEE
T ss_pred CCCCccccCCccCCcchhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCee
Confidence 45666554321 345799999999999999999999999999642 344455
Q ss_pred cccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------ccc--CCCe
Q 040458 190 FSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------AVS--DGVD 234 (732)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------Ai~--dgvd 234 (732)
|.++ ..++.|+.||||||||||+|+ +++ .|++
T Consensus 59 ~~~~-------------~~~~~d~~gHGT~vAgiia~~~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~ 125 (278)
T 2b6n_A 59 FIDN-------------DYDATDCNGHGTHVAGTIGGSTYGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPA 125 (278)
T ss_dssp TTTT-------------BSCCCCSSSHHHHHHHHHHCTTTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSE
T ss_pred cCCC-------------CCCCCCCCCcHHHHHHHHHCCCcCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCe
Confidence 5431 134678999999999999975 333 5999
Q ss_pred EEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCC-cccccCCCceeecCCCcCcccceeEEcCCCeEEee
Q 040458 235 VVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGL-TVTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPG 313 (732)
Q Consensus 235 VInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~-~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~ 313 (732)
|||||||... ...+..++.++.++|++||+||||+|.... ..++..+++++||+..
T Consensus 126 Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~------------------- 182 (278)
T 2b6n_A 126 VANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTT------------------- 182 (278)
T ss_dssp EEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-------------------
T ss_pred EEEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeC-------------------
Confidence 9999999743 457778888899999999999999997643 3456678888887731
Q ss_pred eeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCC
Q 040458 314 VSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFD 393 (732)
Q Consensus 314 ~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~ 393 (732)
T Consensus 183 -------------------------------------------------------------------------------- 182 (278)
T 2b6n_A 183 -------------------------------------------------------------------------------- 182 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeC
Q 040458 394 GEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAP 473 (732)
Q Consensus 394 ~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~AP 473 (732)
..+.++.||++||.+ ||+||
T Consensus 183 ----------------------------------------------------~~~~~~~~S~~G~~~--------di~Ap 202 (278)
T 2b6n_A 183 ----------------------------------------------------SNDSRSSFSNYGTCL--------DIYAP 202 (278)
T ss_dssp ----------------------------------------------------TTSBBCTTCCBSTTC--------CEEEE
T ss_pred ----------------------------------------------------CCCCcCCcCCCCCCC--------eEEeC
Confidence 113568899999854 99999
Q ss_pred CCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhccccc
Q 040458 474 GLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVD 543 (732)
Q Consensus 474 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 543 (732)
|++|+++++.... .|..++|||||||||||++|||+|++|+|++++||++|++||++..
T Consensus 203 G~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 203 GSSITSSWYTSNS-----------ATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp CSSEEEECTTSTT-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred CCCeECcccCCCC-----------CEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 9999999876422 7999999999999999999999999999999999999999998753
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=3.7e-41 Score=352.34 Aligned_cols=224 Identities=32% Similarity=0.406 Sum_probs=177.0
Q ss_pred CCcccCCcCCCCcc----ccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEe
Q 040458 111 SPQFLGLKSSSDSA----GLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIG 186 (732)
Q Consensus 111 s~~~~gl~~~~~~~----~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig 186 (732)
....|+|.++.... .-.|. ..+|+||+|+|||||||++||+|.+. +..
T Consensus 4 ~~~~W~l~~i~~~~~~~~~~~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~ 55 (279)
T 2pwa_A 4 TNAPWGLARISSTSPGTSTYYYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQM 55 (279)
T ss_dssp TTCCHHHHHHTCSSTTCCCEECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEE
T ss_pred CCCCcChhhcCCCCccccccccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------ccc
Confidence 44567776654411 11344 37899999999999999999999642 334
Q ss_pred eeecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------cccCCC
Q 040458 187 ARFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------AVSDGV 233 (732)
Q Consensus 187 ~~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------Ai~dgv 233 (732)
.++|.+ .+.|+.||||||||||+|+ ++++++
T Consensus 56 ~~~~~~----------------~~~d~~gHGT~vAgiia~~~~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~ 119 (279)
T 2pwa_A 56 VKTYYY----------------SSRDGNGHGTHCAGTVGSRTYGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKN 119 (279)
T ss_dssp EEESSS----------------CSSCSSSHHHHHHHHHHCTTTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGG
T ss_pred ccCCCC----------------CCCCCCCCHHHHHHHHHhcccccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCc
Confidence 444431 2567899999999999974 555566
Q ss_pred -------eEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCC-cccccCCCceeecCCCcCcccceeEEc
Q 040458 234 -------DVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGL-TVTNVAPWVTTVGAGTIDRDFPADVHL 305 (732)
Q Consensus 234 -------dVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~-~~~~~~p~v~tVga~~~~~~~~~~~~~ 305 (732)
+|||||||.. ..+.+..++.++.++|++||+||||+|.... ..++..|++++||+..
T Consensus 120 ~~~~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------- 184 (279)
T 2pwa_A 120 NRNCPKGVVASLSLGGG----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASD----------- 184 (279)
T ss_dssp GSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-----------
T ss_pred cccCCCccEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEec-----------
Confidence 9999999974 2467888888999999999999999997643 3466778888888731
Q ss_pred CCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEE
Q 040458 306 GNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGM 385 (732)
Q Consensus 306 ~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~ 385 (732)
T Consensus 185 -------------------------------------------------------------------------------- 184 (279)
T 2pwa_A 185 -------------------------------------------------------------------------------- 184 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCC
Q 040458 386 ILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEI 465 (732)
Q Consensus 386 i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~ 465 (732)
..+.++.||++||.+
T Consensus 185 ------------------------------------------------------------~~~~~~~~S~~G~~~----- 199 (279)
T 2pwa_A 185 ------------------------------------------------------------RYDRRSSFSNYGSVL----- 199 (279)
T ss_dssp ------------------------------------------------------------TTSBBCTTCCBSTTC-----
T ss_pred ------------------------------------------------------------CCCCcCCcCCCCCcc-----
Confidence 113578899999964
Q ss_pred CCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCC
Q 040458 466 LKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNR 545 (732)
Q Consensus 466 lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~ 545 (732)
||+|||++|+++++.+ .|..++|||||||||||++|||+|+ |.+++.+||++|++||++...
T Consensus 200 ---di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~- 261 (279)
T 2pwa_A 200 ---DIFGPGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL- 261 (279)
T ss_dssp ---CEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-
T ss_pred ---eEEEecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-
Confidence 9999999999999876 7999999999999999999999999 999999999999999997531
Q ss_pred CCccccCCCCCCCCCCCCCCCccccc
Q 040458 546 GETMIDESTGNTSTALDFGAGHVHPQ 571 (732)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~G~G~vd~~ 571 (732)
..+|+|..|+.
T Consensus 262 ---------------~~~~~g~~n~l 272 (279)
T 2pwa_A 262 ---------------SNIPFGTVNLL 272 (279)
T ss_dssp ---------------BSCCTTSCCEE
T ss_pred ---------------CCCCCCCccEe
Confidence 14677877764
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=6.5e-40 Score=368.35 Aligned_cols=270 Identities=14% Similarity=0.092 Sum_probs=190.4
Q ss_pred CcccCCcCCC---CccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeee
Q 040458 112 PQFLGLKSSS---DSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGAR 188 (732)
Q Consensus 112 ~~~~gl~~~~---~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~ 188 (732)
..+|+|.+.. -.+..+|..+++|+||+|||||||||++||+|.+.-. ....+
T Consensus 12 ~~qW~l~~~~~~~i~~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~ 66 (471)
T 1p8j_A 12 PQQWYLSGVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASF 66 (471)
T ss_dssp GGCTTTSCTTSCSCCCHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCE
T ss_pred hhCcCCCCCCccCCChHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcc
Confidence 4567776521 1257799999999999999999999999999975300 00122
Q ss_pred ecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc-----------------------------------ccc-CC
Q 040458 189 FFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS-----------------------------------AVS-DG 232 (732)
Q Consensus 189 ~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~-----------------------------------Ai~-dg 232 (732)
+|.++ ..+ +.+...+.|.+||||||||||||. +++ ++
T Consensus 67 d~~~~------~~~-p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g~~GvAp~a~i~~~rv~~g~~~~~~~ai~~a~~~~~ 139 (471)
T 1p8j_A 67 DVNDQ------DPD-PQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNH 139 (471)
T ss_dssp ETTTT------BSC-CCCCCCTTCTTCHHHHHHHHHHCCSSSSSSCCCTTTTSEEEEEECSSSCCCHHHHHHHHTSCTTT
T ss_pred cccCC------CCC-CCCccCCCCCCCcHHHHHHHHHeeccCCCCCEEECCCCeEEEEEccCCchhHHHHHHHhhhccCC
Confidence 33321 100 111124568899999999999984 555 89
Q ss_pred CeEEEecCCCCCCC----CcccHHHHHHHhhhc-----CCceEEEecCCCCCCCCc----ccccCCCceeecCCCcCccc
Q 040458 233 VDVVSLSVGGVVVP----YFLDAIAIAAFGASD-----HGVFVSASAGNGGPGGLT----VTNVAPWVTTVGAGTIDRDF 299 (732)
Q Consensus 233 vdVInlSlG~~~~~----~~~~~~~~~~~~a~~-----~Gi~vV~aAGN~G~~~~~----~~~~~p~v~tVga~~~~~~~ 299 (732)
++|||||||..... .....+..++.++.+ +|++||+||||+|..... ....++++|+|||..
T Consensus 140 ~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~----- 214 (471)
T 1p8j_A 140 IHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSAT----- 214 (471)
T ss_dssp CCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEEC-----
T ss_pred CeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEeccc-----
Confidence 99999999985321 112334555555543 699999999999865321 112346777777621
Q ss_pred ceeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHH
Q 040458 300 PADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKK 379 (732)
Q Consensus 300 ~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 379 (732)
T Consensus 215 -------------------------------------------------------------------------------- 214 (471)
T 1p8j_A 215 -------------------------------------------------------------------------------- 214 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCC
Q 040458 380 AGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPN 459 (732)
Q Consensus 380 ~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~ 459 (732)
..+.++.||++||.
T Consensus 215 ------------------------------------------------------------------~~g~~a~~S~~g~~ 228 (471)
T 1p8j_A 215 ------------------------------------------------------------------QFGNVPWYSEACSS 228 (471)
T ss_dssp ------------------------------------------------------------------TTSCCCTTCCBCTT
T ss_pred ------------------------------------------------------------------CCCCcccccCCCCc
Confidence 12357889999999
Q ss_pred CCCCCCCCCcEEeCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhc
Q 040458 460 PETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTA 539 (732)
Q Consensus 460 ~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA 539 (732)
.. ...+|+..+||.+|+++.+.+ ..|..++|||||||||||++|||+|++|+|++++||++|++||
T Consensus 229 ~~--~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA 294 (471)
T 1p8j_A 229 TL--ATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTS 294 (471)
T ss_dssp CC--EEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHC
T ss_pred ce--EEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcC
Confidence 75 444556666678999997653 1699999999999999999999999999999999999999999
Q ss_pred ccccCCCCccccCCCCCCCCCCCCCCCcccccccCCCCcc
Q 040458 540 YTVDNRGETMIDESTGNTSTALDFGAGHVHPQKAMNPGLI 579 (732)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~lv 579 (732)
+++........... ........||+|+||+.+|++...-
T Consensus 295 ~~~~~~~~~~~~n~-~g~~~~~~~G~G~vda~~Av~~a~~ 333 (471)
T 1p8j_A 295 KPAHLNADDWATNG-VGRKVSHSYGYGLLDAGAMVALAQN 333 (471)
T ss_dssp BCTTCCCSCCEECT-TSCEEBTTTBTCBCCHHHHHHHHHT
T ss_pred ccCCCCCCCceecC-CCcccCCCCCCEEEcHhHHHHHhhc
Confidence 98864332221111 1112456999999999999985443
No 31
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.4e-39 Score=362.07 Aligned_cols=257 Identities=24% Similarity=0.241 Sum_probs=175.4
Q ss_pred ccCCcCCCCc--cccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecc
Q 040458 114 FLGLKSSSDS--AGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFS 191 (732)
Q Consensus 114 ~~gl~~~~~~--~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~ 191 (732)
.|+|.++... ....|..+.+|+||+|||||||||++||+|.+. .....+.+.
T Consensus 3 ~WgL~rI~~~~~~~~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr--------------------------~~~~~~~~v 56 (546)
T 2qtw_B 3 PWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGR--------------------------VMVTDFENV 56 (546)
T ss_dssp CHHHHHTSCSSCC--------CCTTSEEEEEESCCCTTSTTTTTT--------------------------EEEEEEECC
T ss_pred CCChhhcCCCcccchhcccCCCCCCcEEEEECCCCCCCChHHccc--------------------------ccccCcccc
Confidence 3677665431 112688889999999999999999999999753 111111111
Q ss_pred cCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc---------------------------------ccc------CC
Q 040458 192 QGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS---------------------------------AVS------DG 232 (732)
Q Consensus 192 ~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~---------------------------------Ai~------dg 232 (732)
.. .++ ......+.|..||||||||||+|+ +++ .+
T Consensus 57 ~~---~dg----~~f~~~~~D~~GHGThVAGIIag~~~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g 129 (546)
T 2qtw_B 57 PE---EDG----TRFHRQASKCDSHGTHLAGVVSGRDAGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVG 129 (546)
T ss_dssp CC---CC-----------CTTTTHHHHHHHHHHHCTTTCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCS
T ss_pred cC---CCC----ccccCCCCCCCChHHHHHHHHhccCCCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCC
Confidence 10 000 000124578999999999999976 333 48
Q ss_pred CeEEEecCCCCCCCCcccHHHHHHHhhhcCCceEEEecCCCCCCCC-cccccCCCceeecCCCcCcccceeEEcCCCeEE
Q 040458 233 VDVVSLSVGGVVVPYFLDAIAIAAFGASDHGVFVSASAGNGGPGGL-TVTNVAPWVTTVGAGTIDRDFPADVHLGNGKII 311 (732)
Q Consensus 233 vdVInlSlG~~~~~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~-~~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~ 311 (732)
++|||||||+. ....+..++.++.++|++||+||||+|.+.. ..++..|++|+|||...+..
T Consensus 130 ~~VINmSlGg~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~------------- 192 (546)
T 2qtw_B 130 PLVVLLPLAGG----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQ------------- 192 (546)
T ss_dssp CEEEEECEEEE----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSC-------------
T ss_pred CeEEEecCCCC----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCC-------------
Confidence 99999999973 3467788888999999999999999997653 34677899999998421100
Q ss_pred eeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCC
Q 040458 312 PGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGV 391 (732)
Q Consensus 312 ~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 391 (732)
T Consensus 193 -------------------------------------------------------------------------------- 192 (546)
T 2qtw_B 193 -------------------------------------------------------------------------------- 192 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEE
Q 040458 392 FDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVI 471 (732)
Q Consensus 392 ~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 471 (732)
+ ...-..||++|+. |||+
T Consensus 193 ---------------------------------------~---------------a~~s~~fSn~G~~--------vDI~ 210 (546)
T 2qtw_B 193 ---------------------------------------P---------------VTLGTLGTNFGRC--------VDLF 210 (546)
T ss_dssp ---------------------------------------B---------------CEETTEECCBSTT--------CCEE
T ss_pred ---------------------------------------c---------------ccccCCcCCCCCc--------ceEE
Confidence 0 0000238999984 5999
Q ss_pred eCCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCC-----
Q 040458 472 APGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRG----- 546 (732)
Q Consensus 472 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~----- 546 (732)
|||++|+++++.... .|..++|||||||||||++|||+|++|+|+|+|||++|++||.+.....
T Consensus 211 APG~~I~St~~~~~~-----------~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~ 279 (546)
T 2qtw_B 211 APGEDIIGASSDCST-----------CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPE 279 (546)
T ss_dssp EECSSEEEECTTSTT-----------CEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCH
T ss_pred ecCccEEeeccCCCC-----------cEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCcc
Confidence 999999999987532 7999999999999999999999999999999999999999998643221
Q ss_pred -----CccccCCCCCCCCCCCCCCCc--ccccccCC
Q 040458 547 -----ETMIDESTGNTSTALDFGAGH--VHPQKAMN 575 (732)
Q Consensus 547 -----~~~~~~~~~~~~~~~~~G~G~--vd~~~A~~ 575 (732)
.|..- ...+.....+|+|+ .++..+..
T Consensus 280 ~~~~~tpN~l--~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 280 DQRVLTPNLV--AALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp HHHTTSCCEE--CCCCCTTCC--CCCEEEEEECCCC
T ss_pred ccCCCCccch--hccCCcccccCCCcchhchhccCC
Confidence 11100 01122456788888 77777764
No 32
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=1.4e-39 Score=368.03 Aligned_cols=258 Identities=20% Similarity=0.189 Sum_probs=183.7
Q ss_pred cccCCcCCC-----CccccccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEee
Q 040458 113 QFLGLKSSS-----DSAGLLLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGA 187 (732)
Q Consensus 113 ~~~gl~~~~-----~~~~~~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~ 187 (732)
.+|+|.... -.+..+|..+++|+||+|||||||||++||+|.+.- + ..+.
T Consensus 27 ~qW~l~~~~~~g~~i~~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~ 81 (503)
T 2id4_A 27 RQWHLVNPSFPGSDINVLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGS 81 (503)
T ss_dssp GCTTTSCSSSTTCSCCCHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGC
T ss_pred hccCcCCCCCcccccChHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCc
Confidence 457775321 125678999999999999999999999999997541 0 0112
Q ss_pred eecccCccccCCCCCCCCCCCCCCCCCCCcccchhhhhcc-------------------------------------ccc
Q 040458 188 RFFSQGYESTNGKMNETTEFRSPRDSDGHGTHTASIAAGS-------------------------------------AVS 230 (732)
Q Consensus 188 ~~~~~g~~~~~~~~~~~~~~~~~~D~~gHGTHVAGi~ag~-------------------------------------Ai~ 230 (732)
++|..+ . .+.....|.+||||||||||||. +++
T Consensus 82 ~d~~~~------~----~~~~p~~d~~gHGT~vAGiiaa~~~n~~~~~GvAp~a~i~~~rv~~~~~~~~~~~~ai~~a~~ 151 (503)
T 2id4_A 82 WDFNDN------T----NLPKPRLSDDYHGTRCAGEIAAKKGNNFCGVGVGYNAKISGIRILSGDITTEDEAASLIYGLD 151 (503)
T ss_dssp EETTTT------B----SCCCCCSTTTTHHHHHHHHHHCCSSSSSSCCCTTTTSEEEEEECTTSCCCHHHHHHHTTTTTT
T ss_pred ccCCCC------C----CCCCCCCCCCChHHHHHHHHHhccCCCCCcEEECCCCEEEEEEeeCCCCChHHHHHHHHhHhh
Confidence 333331 1 01112357899999999999984 445
Q ss_pred CCCeEEEecCCCCCCC----CcccHHHHHHHhhh-----cCCceEEEecCCCCCCCC--ccc--ccCCCceeecCCCcCc
Q 040458 231 DGVDVVSLSVGGVVVP----YFLDAIAIAAFGAS-----DHGVFVSASAGNGGPGGL--TVT--NVAPWVTTVGAGTIDR 297 (732)
Q Consensus 231 dgvdVInlSlG~~~~~----~~~~~~~~~~~~a~-----~~Gi~vV~aAGN~G~~~~--~~~--~~~p~v~tVga~~~~~ 297 (732)
.+ +|||||||..... .....+..++.++. .+|++||+||||+|.... .++ ...+++|+|||..
T Consensus 152 ~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~--- 227 (503)
T 2id4_A 152 VN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAID--- 227 (503)
T ss_dssp TC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEEC---
T ss_pred cC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeC---
Confidence 55 9999999975321 12234666666665 479999999999986432 111 1345667776621
Q ss_pred ccceeEEcCCCeEEeeeeeecCCCCCCCceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHH
Q 040458 298 DFPADVHLGNGKIIPGVSVYSGPGLKKDQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVV 377 (732)
Q Consensus 298 ~~~~~~~~~~g~~~~~~s~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 377 (732)
T Consensus 228 -------------------------------------------------------------------------------- 227 (503)
T 2id4_A 228 -------------------------------------------------------------------------------- 227 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHcCceEEEEEcCCCCCccccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCC
Q 040458 378 KKAGGVGMILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARG 457 (732)
Q Consensus 378 ~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~G 457 (732)
..+.++.||++|
T Consensus 228 --------------------------------------------------------------------~~~~~a~~S~~g 239 (503)
T 2id4_A 228 --------------------------------------------------------------------HKDLHPPYSEGC 239 (503)
T ss_dssp --------------------------------------------------------------------TTSCCCTTCCCC
T ss_pred --------------------------------------------------------------------CCCCcCCcCCCC
Confidence 123568899999
Q ss_pred CCCCCCCCCCCcEEe----CCCcEEecCCCCCCCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHH
Q 040458 458 PNPETPEILKPDVIA----PGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRS 533 (732)
Q Consensus 458 p~~~~~~~lKPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~ 533 (732)
|.. |++| ||.+|+++...+ ..|..++|||||||||||++|||+|++|+|++++||+
T Consensus 240 ~~~--------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~ 299 (503)
T 2id4_A 240 SAV--------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQY 299 (503)
T ss_dssp TTE--------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred Ccc--------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHH
Confidence 987 7877 899999995432 1799999999999999999999999999999999999
Q ss_pred HHHhhcccccCC-CCccccCCCCCCCCCCCCCCCcccccccCCCCc
Q 040458 534 ALMTTAYTVDNR-GETMIDESTGNTSTALDFGAGHVHPQKAMNPGL 578 (732)
Q Consensus 534 ~L~~TA~~~~~~-~~~~~~~~~~~~~~~~~~G~G~vd~~~A~~~~l 578 (732)
+|+.||+++... ........ ........||+|+||+.+|++...
T Consensus 300 ~L~~tA~~~~~~~~~~~~~~~-~g~~~~~~~G~G~vda~~Av~~a~ 344 (503)
T 2id4_A 300 LSILSAVGLEKNADGDWRDSA-MGKKYSHRYGFGKIDAHKLIEMSK 344 (503)
T ss_dssp HHHHHCBCCTTCGGGCCEECS-SSSEEBTTTBTCBCCHHHHHHHHT
T ss_pred HHHhccccCCCCcCCCceecC-CCCccCcccCCcEecHHHHHHHHh
Confidence 999999987643 11111100 112234689999999999998543
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.8e-39 Score=340.49 Aligned_cols=196 Identities=34% Similarity=0.466 Sum_probs=161.7
Q ss_pred ccccCCCCCccEEEEEecCCCCCCCCcccCCCCCCCCcccceeecCCCCCCccCCceeEeeeecccCccccCCCCCCCCC
Q 040458 127 LLKESDFGSDLVIGVIDTGVWPERQSFNDRDLGPVPRKWKGQCVTTNDFPATSCNRKLIGARFFSQGYESTNGKMNETTE 206 (732)
Q Consensus 127 ~~~~~~~G~GV~VgVIDTGId~~Hp~f~~~~~~~~~~~w~g~~~~g~~f~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~ 206 (732)
.|... +|+||+|||||||||++||+|.+ ++...++|..+
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~---------------------------~~~~~~~~~~~------------- 63 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEG---------------------------RAKQIKSYAST------------- 63 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTT---------------------------CEEEEEECSSS-------------
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhcc---------------------------ccccccCCCCC-------------
Confidence 56555 99999999999999999999964 24444444331
Q ss_pred CCCCCCCCCCcccchhhhhcc---------------------------------cccCC-------CeEEEecCCCCCCC
Q 040458 207 FRSPRDSDGHGTHTASIAAGS---------------------------------AVSDG-------VDVVSLSVGGVVVP 246 (732)
Q Consensus 207 ~~~~~D~~gHGTHVAGi~ag~---------------------------------Ai~dg-------vdVInlSlG~~~~~ 246 (732)
..|..||||||||||+|+ +++++ ++|||||||..
T Consensus 64 ---~~d~~gHGT~vAgii~~~~~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~--- 137 (279)
T 3f7m_A 64 ---ARDGHGHGTHCAGTIGSKTWGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG--- 137 (279)
T ss_dssp ---SSCSSSHHHHHHHHHHCTTTCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE---
T ss_pred ---CCCCCCcHHHHHHHHhcCccccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC---
Confidence 237899999999999975 33333 89999999973
Q ss_pred CcccHHHHHHHhhhcCCceEEEecCCCCCCCCc-ccccCCCceeecCCCcCcccceeEEcCCCeEEeeeeeecCCCCCCC
Q 040458 247 YFLDAIAIAAFGASDHGVFVSASAGNGGPGGLT-VTNVAPWVTTVGAGTIDRDFPADVHLGNGKIIPGVSVYSGPGLKKD 325 (732)
Q Consensus 247 ~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~~-~~~~~p~v~tVga~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~ 325 (732)
..+.+..++.++.++|++||+||||+|..... .++..+++++||+..
T Consensus 138 -~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~------------------------------- 185 (279)
T 3f7m_A 138 -YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATD------------------------------- 185 (279)
T ss_dssp -CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-------------------------------
T ss_pred -ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecC-------------------------------
Confidence 35678888889999999999999999976443 356778888888731
Q ss_pred ceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCccccccCCccc
Q 040458 326 QMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEGLVADCHVLP 405 (732)
Q Consensus 326 ~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p 405 (732)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 3f7m_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEccccHHHHHHHHHhcCCCCCCceEEEEeceeEeccCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCCCC
Q 040458 406 ATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKV 485 (732)
Q Consensus 406 ~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~~t~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~ 485 (732)
..+.++.||++||.+ ||+|||++|+++++.+
T Consensus 186 ----------------------------------------~~~~~~~~S~~g~~~--------di~ApG~~i~s~~~~~- 216 (279)
T 3f7m_A 186 ----------------------------------------SNDVRSTFSNYGRVV--------DIFAPGTSITSTWIGG- 216 (279)
T ss_dssp ----------------------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECGGG-
T ss_pred ----------------------------------------CCCCCCCCCCCCCCC--------eEEECCCCeEeecCCC-
Confidence 113578899999965 9999999999999875
Q ss_pred CCCCCCCCCCccceeeecCcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhccccc
Q 040458 486 GPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVD 543 (732)
Q Consensus 486 ~~~~~~~~~~~~~y~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~ 543 (732)
.|..++|||||||||||++|||+|++|. ++++||++|++||++..
T Consensus 217 ------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 217 ------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp ------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred ------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 7999999999999999999999999999 99999999999999754
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=6.1e-37 Score=355.43 Aligned_cols=126 Identities=26% Similarity=0.282 Sum_probs=89.2
Q ss_pred CCCCccccccCCCCCCCCCCCCCCcEEeCCCcE-------E-ecCCCCCCCC-------------CCCCCCCccceeeec
Q 040458 445 RPAPVVASFSARGPNPETPEILKPDVIAPGLNI-------L-AAWPDKVGPS-------------GIPTDKRKTEFNILS 503 (732)
Q Consensus 445 ~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I-------~-sa~~~~~~~~-------------~~~~~~~~~~y~~~s 503 (732)
...+.++.||++|+.. +++|||.++ + ...++..... ..........|..++
T Consensus 262 ~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 333 (600)
T 3hjr_A 262 NADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMN 333 (600)
T ss_dssp CTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEEC
T ss_pred cCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccc
Confidence 3456789999999987 899999763 2 2222211000 000111234688999
Q ss_pred CcccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccccCCCCcccc--------------------CCCCCCCCCCCC
Q 040458 504 GTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGETMID--------------------ESTGNTSTALDF 563 (732)
Q Consensus 504 GTSMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 563 (732)
|||||||||||++|||+|+||+|+++|||++|++||++++....|+.. ...+.. ....|
T Consensus 334 GTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~-~s~~y 412 (600)
T 3hjr_A 334 GTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMW-FSPTY 412 (600)
T ss_dssp SHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCE-EBTTT
T ss_pred cccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCce-Ecccc
Confidence 999999999999999999999999999999999999998866554221 011111 24579
Q ss_pred CCCcccccccCCCCcc
Q 040458 564 GAGHVHPQKAMNPGLI 579 (732)
Q Consensus 564 G~G~vd~~~A~~~~lv 579 (732)
|+|+||+.+|++.+..
T Consensus 413 GfG~vDA~~aV~~A~~ 428 (600)
T 3hjr_A 413 GFGLIDVNKALELAAN 428 (600)
T ss_dssp BTCBCCHHHHHHHHTT
T ss_pred CCceecHHHHHHHhhc
Confidence 9999999999875433
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.79 E-value=3.6e-20 Score=209.98 Aligned_cols=68 Identities=29% Similarity=0.429 Sum_probs=52.0
Q ss_pred ccc---CCCeEEEecCCCCCCCC---cccHHHHHHHhhhcCCceEEEecCCCCCCC--------CcccccCCCceeecCC
Q 040458 228 AVS---DGVDVVSLSVGGVVVPY---FLDAIAIAAFGASDHGVFVSASAGNGGPGG--------LTVTNVAPWVTTVGAG 293 (732)
Q Consensus 228 Ai~---dgvdVInlSlG~~~~~~---~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~--------~~~~~~~p~v~tVga~ 293 (732)
++. ++++|||+|||.....+ +...+..++.+|..+||+||+||||+|... ..+++..||+++||+.
T Consensus 302 av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat 381 (552)
T 1t1e_A 302 AVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGT 381 (552)
T ss_dssp HHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEE
T ss_pred HHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecc
Confidence 565 79999999999853322 123566777788899999999999999643 3456789999999996
Q ss_pred Cc
Q 040458 294 TI 295 (732)
Q Consensus 294 ~~ 295 (732)
+.
T Consensus 382 ~~ 383 (552)
T 1t1e_A 382 RL 383 (552)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.66 E-value=3.1e-17 Score=177.20 Aligned_cols=68 Identities=28% Similarity=0.249 Sum_probs=51.8
Q ss_pred ccc-CCCeEEEecCCCCCC----CCcccHHHHHHHhhhcCCceEEEecCCCCCCCC-------------cccccCCCcee
Q 040458 228 AVS-DGVDVVSLSVGGVVV----PYFLDAIAIAAFGASDHGVFVSASAGNGGPGGL-------------TVTNVAPWVTT 289 (732)
Q Consensus 228 Ai~-dgvdVInlSlG~~~~----~~~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~~-------------~~~~~~p~v~t 289 (732)
+++ ++++|||||||.... ....+.+..++.+|..+||+||+||||+|...+ ..++..||+++
T Consensus 121 av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~a 200 (372)
T 1ga6_A 121 AVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIA 200 (372)
T ss_dssp HHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEE
T ss_pred HHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEECCCCCccccccCccCCccCCcCCCCCCCCeEE
Confidence 555 799999999998531 112345677777888999999999999997532 45578899999
Q ss_pred ecCCCc
Q 040458 290 VGAGTI 295 (732)
Q Consensus 290 Vga~~~ 295 (732)
||+.+.
T Consensus 201 VGat~~ 206 (372)
T 1ga6_A 201 VGGTTL 206 (372)
T ss_dssp EEEEEE
T ss_pred EEeeec
Confidence 999653
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.16 E-value=1.9e-11 Score=108.87 Aligned_cols=79 Identities=15% Similarity=0.206 Sum_probs=69.7
Q ss_pred CCCCCCeEEEEeCCCCCCCCCcchHHHHHHhhcc--CCCcEEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeceeee
Q 040458 28 EAETPKTFIIKVQYDAKPSIFPTHKHWYESSLSS--ASATLLHTYDTVFHGFSAKLTPSEALRLKTLPHVLAVFSEQVRH 105 (732)
Q Consensus 28 ~~~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~ 105 (732)
...++++|||+|++.........|++|+.+.+.+ .+.+++|+|++.|+||+++|+++++++|+++|+|.+||||+.++
T Consensus 33 ~~~ip~~YIV~lk~~~~~~~~~~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~ 112 (114)
T 2w2n_P 33 PWRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVF 112 (114)
T ss_dssp GGEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEE
T ss_pred ccCCCCcEEEEECCCCCHHHHHHHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEe
Confidence 4557899999999887655566789999988776 55799999999999999999999999999999999999999887
Q ss_pred c
Q 040458 106 L 106 (732)
Q Consensus 106 ~ 106 (732)
.
T Consensus 113 ~ 113 (114)
T 2w2n_P 113 A 113 (114)
T ss_dssp E
T ss_pred c
Confidence 5
No 38
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=99.12 E-value=1.2e-10 Score=97.12 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=60.5
Q ss_pred CCCCCeEEEEeCCCCCCCCCcchHHHHHHhhccCCCcEEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeceeeeccc
Q 040458 29 AETPKTFIIKVQYDAKPSIFPTHKHWYESSLSSASATLLHTYDTVFHGFSAKLTPSEALRLKTLPHVLAVFSEQVRHLHT 108 (732)
Q Consensus 29 ~~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~~~ 108 (732)
...+++|||.|+++.....+ ..+.+++.+.++.|+|++ |+||+++++++++++|+++|+|.+||||+.+++++
T Consensus 5 ~~i~~~YIV~~k~~~~~~~~------~~~~~~~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~t 77 (80)
T 3cnq_P 5 SNGEKKYIVGFKQGFKSCAK------KEDVISEKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALS 77 (80)
T ss_dssp ---CCEEEEEECTTCCSHHH------HHHHHHTTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECC
T ss_pred ccCCCCEEEEECCCCChHHH------HHHHHHHcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEee
Confidence 45689999999988663211 123455667899999998 99999999999999999999999999999999987
Q ss_pred CC
Q 040458 109 TR 110 (732)
Q Consensus 109 ~~ 110 (732)
+.
T Consensus 78 t~ 79 (80)
T 3cnq_P 78 AT 79 (80)
T ss_dssp C-
T ss_pred ec
Confidence 64
No 39
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.99 E-value=2.6e-10 Score=102.64 Aligned_cols=79 Identities=15% Similarity=0.206 Sum_probs=66.5
Q ss_pred CCCCCCeEEEEeCCCCCCCCCcchHHHHHHhhcc--CCCcEEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeceeee
Q 040458 28 EAETPKTFIIKVQYDAKPSIFPTHKHWYESSLSS--ASATLLHTYDTVFHGFSAKLTPSEALRLKTLPHVLAVFSEQVRH 105 (732)
Q Consensus 28 ~~~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~ 105 (732)
...++++|||.||++.....+..+.+++.+.+++ .+.++.|+|++.||||+++++++++++|+++|+|.+|++++.++
T Consensus 43 ~~~Ip~~YIV~~K~~~~~~~~~~~~~~l~~~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~ 122 (124)
T 2qtw_A 43 PWRLPGTYVVVLKEETHLSQSERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVF 122 (124)
T ss_dssp GGEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEE
T ss_pred ccCCCCCEEEEECCCCCHHHHHHHHHHHHHHHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEe
Confidence 4568999999999987655555566666655544 56899999999999999999999999999999999999999886
Q ss_pred c
Q 040458 106 L 106 (732)
Q Consensus 106 ~ 106 (732)
.
T Consensus 123 a 123 (124)
T 2qtw_A 123 A 123 (124)
T ss_dssp E
T ss_pred c
Confidence 5
No 40
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.90 E-value=1.5e-09 Score=122.11 Aligned_cols=66 Identities=24% Similarity=0.373 Sum_probs=49.0
Q ss_pred cCCCeEEEecCCCCCCCC---cccHHHHHHHhhhcCCceEEEecCCCCCCC----------CcccccCCCceeecCCCc
Q 040458 230 SDGVDVVSLSVGGVVVPY---FLDAIAIAAFGASDHGVFVSASAGNGGPGG----------LTVTNVAPWVTTVGAGTI 295 (732)
Q Consensus 230 ~dgvdVInlSlG~~~~~~---~~~~~~~~~~~a~~~Gi~vV~aAGN~G~~~----------~~~~~~~p~v~tVga~~~ 295 (732)
.+-.+|||+|||...... +...+...+..+..+||.|++|+||+|... ...++..|||++||+++.
T Consensus 296 ~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 296 SALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp SSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 456789999999863322 223455666678899999999999999753 245578899999998653
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.75 E-value=8.9e-09 Score=84.53 Aligned_cols=70 Identities=20% Similarity=0.341 Sum_probs=57.8
Q ss_pred CeEEEEeCCCCCCCCCcchHHHHHHhhccCCCcEEEEec-ceeeEEEEEcCHHHHHHHhCC--CCeEEEEeceeeec
Q 040458 33 KTFIIKVQYDAKPSIFPTHKHWYESSLSSASATLLHTYD-TVFHGFSAKLTPSEALRLKTL--PHVLAVFSEQVRHL 106 (732)
Q Consensus 33 ~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~-~~~ng~s~~~~~~~~~~L~~~--p~V~~V~~~~~~~~ 106 (732)
++|||.|+++...+....+.+++. +.+.++.|.|+ ..|+||+++++++.+++|+++ |.|.+||+|+.+++
T Consensus 3 ~sYIV~lk~~~~~~~~~~~~~~~~----~~gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDKIRETKDEVI----AEGGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHH----HHTCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHH----hhCCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 689999999876554545555544 34568899994 799999999999999999999 89999999998864
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.58 E-value=2.5e-07 Score=89.30 Aligned_cols=93 Identities=15% Similarity=0.093 Sum_probs=72.1
Q ss_pred CccccCCCCCCCCC-------ccceEEEEecCC-CCcchhhHHHHHcCceEEEEEcCCCCCcc---cc-ccCCcccEEEE
Q 040458 342 SASLCLEGSLDPAF-------VRGKIVVCDRGI-NSRPAKGEVVKKAGGVGMILANGVFDGEG---LV-ADCHVLPATSV 409 (732)
Q Consensus 342 ~~~~C~~~~~~~~~-------~~gkivl~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~---~~-~~~~~~p~~~v 409 (732)
....|.+....... .++||+|++||. |.|.+|..+++++||.++|++|+...+.. +. .....+|+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 46789886543222 478999999999 99999999999999999999998532221 11 12347999999
Q ss_pred ccccHHHHHHHHHhcCCCCCCceEEEEec
Q 040458 410 GAASGDEIRKYIMSAEKSKSPATATIVFK 438 (732)
Q Consensus 410 ~~~~g~~l~~~~~~~~~~~~~~~~~i~~~ 438 (732)
+..+|+.|++.+..+.. .+++|.+.
T Consensus 162 s~~~G~~L~~~L~~G~~----Vtvti~vg 186 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQ----VTMVIEVG 186 (194)
T ss_dssp CHHHHHHHHHHHHTTCC----EEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCe----EEEEEECC
Confidence 99999999999998866 55555554
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=98.00 E-value=8.2e-06 Score=64.49 Aligned_cols=63 Identities=13% Similarity=0.159 Sum_probs=53.8
Q ss_pred CeEEEEeCCCCCCCCCcchHHHHHHhhccCCCcEEEEecceeeEEEEEcCHHHHHHHhCCCCeEEEEeceeeec
Q 040458 33 KTFIIKVQYDAKPSIFPTHKHWYESSLSSASATLLHTYDTVFHGFSAKLTPSEALRLKTLPHVLAVFSEQVRHL 106 (732)
Q Consensus 33 ~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~ng~s~~~~~~~~~~L~~~p~V~~V~~~~~~~~ 106 (732)
.+|||.|++... ..+.++..+.++.++|. .+++++++|+++.+++|+++|+|++|++|..++.
T Consensus 2 ~~~IV~f~~~~~----------~~~~i~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 2 IRVIVSVDKAKF----------NPHEVLGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp EEEEEEECGGGC----------CGGGGGGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred eeEEEEEcCcch----------hHHHHHHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 489999987522 12467788899999998 8999999999999999999999999999988753
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.51 E-value=0.008 Score=65.77 Aligned_cols=88 Identities=24% Similarity=0.274 Sum_probs=65.9
Q ss_pred CceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCcc--cc-ccC
Q 040458 325 DQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEG--LV-ADC 401 (732)
Q Consensus 325 ~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~--~~-~~~ 401 (732)
..+.++++.+.+ ....+...+++|||+++++|.|.+..|..+++++||.|+|++++...... +. ...
T Consensus 92 ~v~a~lv~~~~G----------~~~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~ 161 (421)
T 2ek8_A 92 DVTAELVYVGLG----------TTADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDA 161 (421)
T ss_dssp EEEEEEEECTTC----------CTTTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCT
T ss_pred CcceEEEECCCC----------ChhhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCC
Confidence 345677775542 11223334899999999999999999999999999999999998642111 11 134
Q ss_pred CcccEEEEccccHHHHHHHHH
Q 040458 402 HVLPATSVGAASGDEIRKYIM 422 (732)
Q Consensus 402 ~~~p~~~v~~~~g~~l~~~~~ 422 (732)
..+|...++.++++.|...+.
T Consensus 162 ~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 162 SFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TCCEEEEECHHHHHHHHHHHH
T ss_pred CCccEEEeCHHHHHHHHHHhh
Confidence 578999999999999999884
No 45
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.21 E-value=0.053 Score=48.15 Aligned_cols=73 Identities=22% Similarity=0.383 Sum_probs=52.8
Q ss_pred eeEEEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEcccccCCCCCCceEEEEEEE-CCcc
Q 040458 640 MSTHFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSMKSGKIVWS-DGKH 718 (732)
Q Consensus 640 ~~~~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~~~G~i~~~-~~~~ 718 (732)
.+.+.+.+|+|+|+.+..|+..... -++|+|..-++ ++||+..++|+|.... ...+.+.|... ++..
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~----~F~i~P~~g~L-~pg~~~~i~V~F~P~~-------~g~~~~~l~v~~~~g~ 108 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCR----PFSIEPAIGTL-NVGESMQLEVEFEPQS-------VGDHSGRLIVCYDTGE 108 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCT----TEEEESSEEEE-CTTCEEEEEEEECCSS-------SBCCCCBCEEEESSSC
T ss_pred CeEEEEEEEEECCCCCEEEEEecCC----CeEEECCcCEE-CCCCEEEEEEEEEcCC-------CccEEEEEEEEECCCC
Confidence 3567778999999988888877643 36778999888 7999999999999765 23345555543 5555
Q ss_pred EEEeEE
Q 040458 719 NVTSPI 724 (732)
Q Consensus 719 ~vr~P~ 724 (732)
.+.+++
T Consensus 109 ~~~v~L 114 (122)
T 2ys4_A 109 KVFVSL 114 (122)
T ss_dssp EECCEE
T ss_pred EEEEEE
Confidence 555544
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.01 E-value=0.069 Score=58.68 Aligned_cols=101 Identities=13% Similarity=0.179 Sum_probs=68.6
Q ss_pred CceEEEEEcCCCCCCCCCccccCCCCCCCCCccceEEEEecCCCC---------cchh----hHHHHHcCceEEEEEcCC
Q 040458 325 DQMYSLVYAGSESGDGYSASLCLEGSLDPAFVRGKIVVCDRGINS---------RPAK----GEVVKKAGGVGMILANGV 391 (732)
Q Consensus 325 ~~~~~lv~~~~~~~~~~~~~~C~~~~~~~~~~~gkivl~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~ 391 (732)
..+.++|+... ...|.. ....+++|||||++++.|. +..| ..+++++||.|+|++|..
T Consensus 105 ~vta~lV~v~~-------~~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~ 175 (444)
T 3iib_A 105 GLSATIVRFDT-------LQDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIG 175 (444)
T ss_dssp CEEEEEEEESS-------HHHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CeEEEEEecCC-------HHHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccC
Confidence 56778887543 122322 2346899999999998875 2333 356899999999999875
Q ss_pred CCCcc--------ccccCCcccEEEEccccHHHHHHHHHhcCCCCCCceEEEEec
Q 040458 392 FDGEG--------LVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFK 438 (732)
Q Consensus 392 ~~~~~--------~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~~~~~i~~~ 438 (732)
..... .......+|++.|+.++++.|...+..+.. ..+++...
T Consensus 176 ~~~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~----~~v~l~~~ 226 (444)
T 3iib_A 176 TDHDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKE----VVISLELG 226 (444)
T ss_dssp SCCSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCC----CEEEEEEE
T ss_pred CcccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCC----eEEEEEEe
Confidence 42211 111235799999999999999999876644 44555443
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=94.55 E-value=0.038 Score=63.23 Aligned_cols=68 Identities=13% Similarity=0.168 Sum_probs=54.4
Q ss_pred CCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCCCcc------------------cc----------------c
Q 040458 354 AFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFDGEG------------------LV----------------A 399 (732)
Q Consensus 354 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~------------------~~----------------~ 399 (732)
.+++|||+|+++|.|.+..|..+++++||.|+|++++...... .. .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 4799999999999999999999999999999999987642100 00 0
Q ss_pred cCCcccEEEEccccHHHHHHHH
Q 040458 400 DCHVLPATSVGAASGDEIRKYI 421 (732)
Q Consensus 400 ~~~~~p~~~v~~~~g~~l~~~~ 421 (732)
....+|+..|+..+++.|+..+
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l 229 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNM 229 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTE
T ss_pred CCCCCCEEecCHHHHHHHHHHc
Confidence 0235899999999999998754
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.18 E-value=0.042 Score=63.61 Aligned_cols=69 Identities=23% Similarity=0.330 Sum_probs=55.1
Q ss_pred CCccceEEEEecCCCCcchhhHHHHHcCceEEEEEcCCCC----C--------------c---cc-----cc--------
Q 040458 354 AFVRGKIVVCDRGINSRPAKGEVVKKAGGVGMILANGVFD----G--------------E---GL-----VA-------- 399 (732)
Q Consensus 354 ~~~~gkivl~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~----~--------------~---~~-----~~-------- 399 (732)
.+++|||+|+++|.|.+.+|..+++++||.|+|++++..+ + . .+ ..
T Consensus 151 ~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~p 230 (707)
T 3fed_A 151 INCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYP 230 (707)
T ss_dssp CCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSC
T ss_pred CCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCCc
Confidence 5799999999999999999999999999999999986320 0 0 00 00
Q ss_pred --------------cCCcccEEEEccccHHHHHHHHH
Q 040458 400 --------------DCHVLPATSVGAASGDEIRKYIM 422 (732)
Q Consensus 400 --------------~~~~~p~~~v~~~~g~~l~~~~~ 422 (732)
....||+..|+..+++.|+..+.
T Consensus 231 s~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~ 267 (707)
T 3fed_A 231 AKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLG 267 (707)
T ss_dssp CCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBC
T ss_pred ccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhc
Confidence 02468999999999999988764
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=90.52 E-value=1.3 Score=40.16 Aligned_cols=88 Identities=10% Similarity=0.040 Sum_probs=61.0
Q ss_pred eEEEEEEEEecCCCCceEEEEEeC----CCCcEEEEecceeEEecCCcEEEEEEEEEEccc---ccCCCCCCceEEEEEE
Q 040458 641 STHFIRTVTNVGDPNSAYKVTIRP----PSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAV---KLSPGSSSMKSGKIVW 713 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~v~~----~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~---~~~~~~~~~~~G~i~~ 713 (732)
..+-+.||+|+|..+.+|++.... ...--++|+|..-++ ++||+..++|++.+... ++... ..-..--|++
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g-~~~l~diLvL 121 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSG-EDKIEDILVL 121 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHS-SSCSCEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccc-hhhhheeEEE
Confidence 345567889999999999998532 112236778999888 89999999999987531 11111 1223555666
Q ss_pred E-CCccEEEeEEEEEecC
Q 040458 714 S-DGKHNVTSPIVVTMQQ 730 (732)
Q Consensus 714 ~-~~~~~vr~P~~~~~~~ 730 (732)
. +++....+|+...+.+
T Consensus 122 ~Ve~G~d~fI~v~g~~~p 139 (140)
T 3qbt_B 122 HLDRGKDYFLTISGNYLP 139 (140)
T ss_dssp EETTSCEEEEEEEEEECC
T ss_pred EeecCCcEEEEEeccccC
Confidence 4 6888889999887754
No 50
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=89.62 E-value=0.25 Score=60.42 Aligned_cols=25 Identities=28% Similarity=0.482 Sum_probs=23.2
Q ss_pred CCCCCccEEEEEecCCCCCCCCccc
Q 040458 131 SDFGSDLVIGVIDTGVWPERQSFND 155 (732)
Q Consensus 131 ~~~G~GV~VgVIDTGId~~Hp~f~~ 155 (732)
.+.|+||+|||+|||||+.+|-|+-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 5799999999999999999999963
No 51
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=89.04 E-value=0.26 Score=54.01 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=27.8
Q ss_pred cCCCCccccccCCCCCCCCCCCCCCcEEeCCCcEEecCCCC
Q 040458 444 VRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDK 484 (732)
Q Consensus 444 ~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 484 (732)
....+.++.||++|+.+ ||+|||++|+++++.+
T Consensus 180 ~~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 180 VDSNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp ECTTCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred ECCCCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 34456899999999865 9999999999998854
No 52
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.29 E-value=0.64 Score=40.07 Aligned_cols=55 Identities=9% Similarity=0.161 Sum_probs=41.6
Q ss_pred eEEEEEEEEecCCCCceEEEEEeC-CCCcEEEEecceeEEecCCcEEEEEEEEEEcc
Q 040458 641 STHFIRTVTNVGDPNSAYKVTIRP-PSGMTVTVQPEKLVFRRVGQKLNFLVRVEATA 696 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~v~~-~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 696 (732)
..+.+.+++|+|+.+..|+..... +.+...+++|..-.+ ++|+++.++|+|....
T Consensus 27 ~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~ 82 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII 82 (112)
T ss_dssp CEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC
T ss_pred EEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC
Confidence 455567899999999999984311 123347778998888 7999999999998754
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=85.22 E-value=3.8 Score=35.70 Aligned_cols=52 Identities=13% Similarity=0.232 Sum_probs=42.7
Q ss_pred EEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEcc
Q 040458 643 HFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATA 696 (732)
Q Consensus 643 ~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 696 (732)
..+..+.|..+...+|++++...+|+++. .|..+.+ ++||..++.|.+.++.
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 45568889999999999999988776654 3556777 7999999999999876
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=77.63 E-value=5.8 Score=38.67 Aligned_cols=80 Identities=11% Similarity=0.094 Sum_probs=51.9
Q ss_pred eEEEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEcccccCCCCCCceEEEEEEE--C--C
Q 040458 641 STHFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSMKSGKIVWS--D--G 716 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~~~G~i~~~--~--~ 716 (732)
..+.+.+++|.|+.+.+++... .|+-+++...|..| ++||+.+++|+++... ... -+...+.|++. + +
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~~I---~PG~~g~I~vt~~~~~---~~~-~G~~~~~i~v~~~~~~~ 91 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAFRL---QAREPRELNLSLAVPR---NMP-PGMKDEPLVLEVTSPET 91 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEEEE---CSSSCEEEEEEECCCT---TCC-SEEEEEEEEEEEECTTT
T ss_pred cceEEEEEEeCCCCceEEEecc-CCCceEeeeCccee---CCCCceEEEEEEcchh---ccc-CCceeeEEEEEEEcCCC
Confidence 3455778999999888887643 36666665555544 7999999999998765 221 23445667764 3 3
Q ss_pred c--cEEEeEEEEEe
Q 040458 717 K--HNVTSPIVVTM 728 (732)
Q Consensus 717 ~--~~vr~P~~~~~ 728 (732)
. ...++|+....
T Consensus 92 ~~~~~~~i~v~g~v 105 (220)
T 2qsv_A 92 GKKAVDSVMVSLPL 105 (220)
T ss_dssp CCEEEEEEEEEEEE
T ss_pred CcccccEEEEEEEE
Confidence 2 24477766543
No 55
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=64.71 E-value=12 Score=39.52 Aligned_cols=88 Identities=10% Similarity=0.067 Sum_probs=57.9
Q ss_pred eEEEEEEEEecCCCCceEEEEEeCCCCcE----EEEecceeEEecCCcEEEEEEEEEEccc---ccCCCCCCceEEEEEE
Q 040458 641 STHFIRTVTNVGDPNSAYKVTIRPPSGMT----VTVQPEKLVFRRVGQKLNFLVRVEATAV---KLSPGSSSMKSGKIVW 713 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~v~~~~g~~----v~v~p~~l~~~~~~~~~~~~vt~~~~~~---~~~~~~~~~~~G~i~~ 713 (732)
..+-+.||+|+|..+.+|++.-....... ++|+|..-++ .+||+.+++|++.+... ++... ..-.+--|++
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g-~~~l~diLvL 124 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSG-EDKIEDILVL 124 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHT-SSCSCEEEEE
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcC-ccccceEEEE
Confidence 44556788999999999998654322222 7788998888 89999999999987640 01101 1223444555
Q ss_pred E-CCccEEEeEEEEEecC
Q 040458 714 S-DGKHNVTSPIVVTMQQ 730 (732)
Q Consensus 714 ~-~~~~~vr~P~~~~~~~ 730 (732)
. ++++..-+|+-..+.+
T Consensus 125 ~ve~G~d~FI~v~~~~~~ 142 (366)
T 3qis_A 125 HLDRGKDYFLTISGNYLP 142 (366)
T ss_dssp EETTSCEEEEEEEEEECC
T ss_pred EEeCCCcEEEEeccccCC
Confidence 3 5667777777666654
No 56
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=62.70 E-value=21 Score=31.50 Aligned_cols=50 Identities=12% Similarity=0.080 Sum_probs=35.4
Q ss_pred eeEEEEEEEEecCCCC-ceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEE
Q 040458 640 MSTHFIRTVTNVGDPN-SAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVE 693 (732)
Q Consensus 640 ~~~~~~rtvtn~~~~~-~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~ 693 (732)
...+++.||+|.|... ..|++++.. .|-.+.-. ...+ ++|+++++++++.
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~ 83 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWT 83 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEEC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEE
Confidence 4789999999999865 568888754 44444432 2345 7899988777765
No 57
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=52.06 E-value=18 Score=41.79 Aligned_cols=76 Identities=11% Similarity=0.120 Sum_probs=43.8
Q ss_pred CccCCCceEEEEeecCCcceeEEEEEEEEecCCCCceEEEEE--eCCCC-c----EEEEecceeEEecCCcEEEEEEEEE
Q 040458 621 GNLNYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPNSAYKVTI--RPPSG-M----TVTVQPEKLVFRRVGQKLNFLVRVE 693 (732)
Q Consensus 621 ~~ln~psi~~~~~~~~~~~~~~~~~rtvtn~~~~~~ty~~~v--~~~~g-~----~v~v~p~~l~~~~~~~~~~~~vt~~ 693 (732)
.-|-|.+|..+...-.......+++.+|||+|+....-.+++ ..|.+ + +--+-=..+.+.++||+++++++++
T Consensus 596 ~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~ 675 (721)
T 2x41_A 596 YGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIP 675 (721)
T ss_dssp CCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEE
T ss_pred CCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEEC
Confidence 356666666553321000046889999999999776666555 34432 1 0001111231338999999988888
Q ss_pred Ecc
Q 040458 694 ATA 696 (732)
Q Consensus 694 ~~~ 696 (732)
...
T Consensus 676 ~~~ 678 (721)
T 2x41_A 676 VRD 678 (721)
T ss_dssp GGG
T ss_pred HHH
Confidence 654
No 58
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=51.34 E-value=50 Score=28.52 Aligned_cols=50 Identities=18% Similarity=0.139 Sum_probs=39.1
Q ss_pred EEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEc
Q 040458 643 HFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEAT 695 (732)
Q Consensus 643 ~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 695 (732)
+-+.+++|.++....|+++-..|.-. .|.|..= |.++|++.++.|+....
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Y--rVrP~~G-~I~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHY--RVRPVYG-FVDAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTE--EEECSEE-EECTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCce--EEcCCce-EECCCCeEEEEEEeCCC
Confidence 34568899999888999998888754 5668754 44899999999988754
No 59
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=50.41 E-value=60 Score=37.37 Aligned_cols=56 Identities=16% Similarity=0.092 Sum_probs=36.1
Q ss_pred eeEEEEEEEEecCCCCceEEEEE--eCCCCc-----EEEEecceeEEecCCcEEEEEEEEEEcc
Q 040458 640 MSTHFIRTVTNVGDPNSAYKVTI--RPPSGM-----TVTVQPEKLVFRRVGQKLNFLVRVEATA 696 (732)
Q Consensus 640 ~~~~~~rtvtn~~~~~~ty~~~v--~~~~g~-----~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 696 (732)
...+++.+|||+|+....-.+++ ..|.+- +--.-=..+.+ ++||+++++++++...
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHHH
Confidence 35788999999999877666665 334321 11111123344 8999999988887653
No 60
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=50.28 E-value=58 Score=27.70 Aligned_cols=49 Identities=10% Similarity=0.101 Sum_probs=38.9
Q ss_pred EEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEc
Q 040458 644 FIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEAT 695 (732)
Q Consensus 644 ~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 695 (732)
-+.+++|.++....|+++-..|.-. .|.|..=.+ ++|++.++.|+....
T Consensus 19 ~~l~L~N~t~~~vaFKVKtT~p~~y--~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 19 STHKLVNGGAEKIVFKIKSSNNNEY--RIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEECSSSCEEEEEEESCSSSE--EEECSEEEE-CTTEEEEEEEEECSC
T ss_pred EEEEEEcCCCCeEEEEEEeCCCCce--EEcCCceEE-CCCCeEEEEEEeCCC
Confidence 3568899999989999998888754 566885544 899999999888763
No 61
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=49.66 E-value=4.6 Score=35.26 Aligned_cols=52 Identities=25% Similarity=0.332 Sum_probs=33.3
Q ss_pred EEEEEecCCCCceEEEEEe-CCCCcEEEEecceeEEe-cCCcEEEEEEEEEEcc
Q 040458 645 IRTVTNVGDPNSAYKVTIR-PPSGMTVTVQPEKLVFR-RVGQKLNFLVRVEATA 696 (732)
Q Consensus 645 ~rtvtn~~~~~~ty~~~v~-~~~g~~v~v~p~~l~~~-~~~~~~~~~vt~~~~~ 696 (732)
..-++|.+....+..+++. .|.|++++++|+.+++. ...++++|.|+++...
T Consensus 58 ~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 58 FVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp EEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred EEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 3455565543333445555 68999999999988765 4456677777766544
No 62
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=48.01 E-value=45 Score=29.14 Aligned_cols=50 Identities=16% Similarity=0.237 Sum_probs=40.3
Q ss_pred EEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEc
Q 040458 643 HFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEAT 695 (732)
Q Consensus 643 ~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 695 (732)
+-..+|+|.++...-|+++-.+|.-. .|.|..=.+ ++||+..+.|++..-
T Consensus 28 ~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 28 TYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEE-CTTCEEEEEEEECCC
T ss_pred EEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEE-CCCCEEEEEEEecCC
Confidence 33468899999889999999988754 567887666 899999999988763
No 63
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=45.97 E-value=85 Score=27.28 Aligned_cols=52 Identities=19% Similarity=0.231 Sum_probs=41.7
Q ss_pred eEEEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEc
Q 040458 641 STHFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEAT 695 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 695 (732)
..+-..+|+|.++....|+++-.+|.- ..|.|..=.+ ++|++..+.|++...
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECcC
Confidence 355567899999988899999988864 5667987555 899999999998764
No 64
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=45.66 E-value=54 Score=29.70 Aligned_cols=50 Identities=22% Similarity=0.320 Sum_probs=40.7
Q ss_pred EEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEc
Q 040458 643 HFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEAT 695 (732)
Q Consensus 643 ~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 695 (732)
+-..+|+|.++....|+++-.+|.- ..|.|..=.+ ++|++..++|++...
T Consensus 38 ~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 38 KTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECSS
T ss_pred EEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecCc
Confidence 3457899999988899999988874 5667987655 899999999998753
No 65
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=44.24 E-value=1.3e+02 Score=26.00 Aligned_cols=53 Identities=9% Similarity=0.126 Sum_probs=37.1
Q ss_pred eeEEEEEEEEecCCCCc--------eEEEEEeCCCCcEEEE---------ecceeEEecCCcEEEEEEEEE
Q 040458 640 MSTHFIRTVTNVGDPNS--------AYKVTIRPPSGMTVTV---------QPEKLVFRRVGQKLNFLVRVE 693 (732)
Q Consensus 640 ~~~~~~rtvtn~~~~~~--------ty~~~v~~~~g~~v~v---------~p~~l~~~~~~~~~~~~vt~~ 693 (732)
....++.||+|.++.+. .|.+.+....|-+|-- -....++ ++||+++|+.+++
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~ 87 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWK 87 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEES
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeC
Confidence 46788999999997543 4666676666654441 1224466 8999999999987
No 66
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=43.42 E-value=1e+02 Score=36.29 Aligned_cols=71 Identities=15% Similarity=0.089 Sum_probs=43.6
Q ss_pred CCccCCCceEEE--EeecCCcceeEEEEEEEEecC-CCCceEEEEE--eCCCC-c----EEEEecceeEEecCCcEEEEE
Q 040458 620 VGNLNYPSLSAV--FQQYGKHKMSTHFIRTVTNVG-DPNSAYKVTI--RPPSG-M----TVTVQPEKLVFRRVGQKLNFL 689 (732)
Q Consensus 620 ~~~ln~psi~~~--~~~~~~~~~~~~~~rtvtn~~-~~~~ty~~~v--~~~~g-~----~v~v~p~~l~~~~~~~~~~~~ 689 (732)
..-|-|.+|..+ .+.-.. ...+++.+|||+| +....-.+.+ ..|.+ + +--.-=..+.+ ++||+++++
T Consensus 715 G~GLSYTtF~ys~~~l~v~~--~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~ 791 (845)
T 3abz_A 715 GYGLSYTTFELDISDFKVTD--DKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHL-EPGEKKTVN 791 (845)
T ss_dssp TCCBCSSCEEEEEEEEEECS--SEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE-CTTCEEEEE
T ss_pred cCCCcceeEEEecccccccC--CeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEE-CCCCEEEEE
Confidence 446778887776 432111 4688999999999 8776665555 22321 1 11111113344 899999999
Q ss_pred EEEE
Q 040458 690 VRVE 693 (732)
Q Consensus 690 vt~~ 693 (732)
++++
T Consensus 792 ~~l~ 795 (845)
T 3abz_A 792 IDLE 795 (845)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 8888
No 67
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=43.11 E-value=1.2e+02 Score=33.73 Aligned_cols=64 Identities=14% Similarity=0.090 Sum_probs=44.3
Q ss_pred CCCceEEEEeecCCcceeEEEEEEEEecCCCCceE-EEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEcc
Q 040458 624 NYPSLSAVFQQYGKHKMSTHFIRTVTNVGDPNSAY-KVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATA 696 (732)
Q Consensus 624 n~psi~~~~~~~~~~~~~~~~~rtvtn~~~~~~ty-~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 696 (732)
..|.+++.- . .+.+++.+|+|.+.....- ++++..|.+.+++. ....| ++|++.+++|+|+++.
T Consensus 363 ~~~~~~~~~---g---~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~ 427 (601)
T 1w8o_A 363 TIPDVALEP---G---QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITVPA 427 (601)
T ss_dssp ECCCEEECT---T---CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEECCT
T ss_pred cCccceecC---C---ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEecCC
Confidence 446666532 1 4788889999986643322 45577799998886 34455 6899999988888765
No 68
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=39.97 E-value=64 Score=28.96 Aligned_cols=51 Identities=18% Similarity=0.240 Sum_probs=40.7
Q ss_pred EEEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEc
Q 040458 642 THFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEAT 695 (732)
Q Consensus 642 ~~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 695 (732)
.+-..+|+|.++....|+++-..|.- ..|.|..=.+ +++++..+.|++...
T Consensus 33 ~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~~ 83 (147)
T 2cri_A 33 VTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQPF 83 (147)
T ss_dssp CCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECCC
T ss_pred EEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECCC
Confidence 34456889999988899999998875 5567886554 899999999998764
No 69
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=38.03 E-value=22 Score=26.70 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=27.8
Q ss_pred ccchhHHHHHHHHHHhhCCCCCHHHHHHHHHhhcccc
Q 040458 506 SMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTV 542 (732)
Q Consensus 506 SMAaP~VAG~aALl~q~~p~~sp~~ik~~L~~TA~~~ 542 (732)
|-..|..--....|++.||+++...|+..|...-..+
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gdv 39 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGNK 39 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTCH
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCCH
Confidence 3344445556788999999999999999998765443
No 70
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=35.86 E-value=91 Score=29.91 Aligned_cols=52 Identities=13% Similarity=0.204 Sum_probs=34.3
Q ss_pred eEEEEEEEEecCCCCceEEEEEeCCCC-cEEEEecceeEEecCCcEEEEEEEEEEcc
Q 040458 641 STHFIRTVTNVGDPNSAYKVTIRPPSG-MTVTVQPEKLVFRRVGQKLNFLVRVEATA 696 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~v~~~~g-~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 696 (732)
..+.+.+++|+|+.+...+ .+...-| ..+.. ..-.+ ++||+.+++|+++...
T Consensus 135 ~~~~~f~i~N~G~~pL~I~-~v~~scgct~~~~--~~~~i-~PGe~~~i~v~~~~~~ 187 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGPLRLH-SVTTRNPALTAVP--DRTEI-KPGGSTLLRIAVDPQV 187 (220)
T ss_dssp CEEEEEEEEECSSSCEEEE-EEEECSTTEEEEE--SCSEE-CTTCEEEEEEEECHHH
T ss_pred eEEEEEEEEECCCCCEEEE-EEEeCCCCEeeec--CCccC-CCCCEEEEEEEEecCC
Confidence 4566779999999876653 2233333 33333 33344 7999999999998765
No 71
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=34.99 E-value=99 Score=30.61 Aligned_cols=52 Identities=10% Similarity=0.070 Sum_probs=36.4
Q ss_pred eEEEEEEEEecCCCCceEEEEE--eC------CC--CcEEEEecceeEEecCCcEEEEEEEEEEc
Q 040458 641 STHFIRTVTNVGDPNSAYKVTI--RP------PS--GMTVTVQPEKLVFRRVGQKLNFLVRVEAT 695 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~v--~~------~~--g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 695 (732)
....+.+|+|.++. .|-+++ +. |+ ...+.|+|..+.+ ++|+++.++|.....
T Consensus 43 ~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~~ 104 (257)
T 3q48_A 43 EREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLKA 104 (257)
T ss_dssp CSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECCC
T ss_pred CcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECCC
Confidence 34567789999865 455443 32 11 2458899999998 799999999876543
No 72
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=27.42 E-value=1.4e+02 Score=28.76 Aligned_cols=59 Identities=15% Similarity=0.143 Sum_probs=38.2
Q ss_pred eEEEEEEEEecCCCCceEEEE--EeC---C--CCcEEEEecceeEEecCCcEEEEEEEEEEcccccCCCCCC
Q 040458 641 STHFIRTVTNVGDPNSAYKVT--IRP---P--SGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSS 705 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~--v~~---~--~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~ 705 (732)
.+..+.+|+|.++.+ |-+. ++. . ...-+.|+|..+.+ ++|+++.++|..+... .|...+
T Consensus 27 ~k~~sl~l~N~~~~p--~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~~~---LP~DRE 92 (218)
T 4ay0_A 27 AAGVMVSVKNTQDYP--VLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAGGV---FPRDKE 92 (218)
T ss_dssp CSCEEEEEECCSSSC--EEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECSCC---CCSSSC
T ss_pred CcEEEEEEEcCCCCC--EEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecCCC---CCcCcE
Confidence 345567888987653 4444 331 1 12347789999998 7999999998765443 455334
No 73
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=26.25 E-value=2.6e+02 Score=23.28 Aligned_cols=66 Identities=18% Similarity=0.134 Sum_probs=43.4
Q ss_pred ceEEEEeecCCcceeEEEEEEEEecCCCCceEEEEEeCCCCcEEEEecceeEEecCCcEEEEEEEEEEcccccCCCCCCc
Q 040458 627 SLSAVFQQYGKHKMSTHFIRTVTNVGDPNSAYKVTIRPPSGMTVTVQPEKLVFRRVGQKLNFLVRVEATAVKLSPGSSSM 706 (732)
Q Consensus 627 si~~~~~~~~~~~~~~~~~rtvtn~~~~~~ty~~~v~~~~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~~~ 706 (732)
.+++.|.. ....++.||+|-......|.-.+..|.- +++ .+ ...++-.|+|.+.... .+
T Consensus 35 vlsV~F~~-----~~~~vTItItNe~TG~~VYs~~~s~p~~--i~I-----dL-nge~sG~Y~IeI~~~~--------~~ 93 (101)
T 3sd2_A 35 ILNVSFGR-----AKDYAIITVTNKATGEIVHSKTYHNTSI--VMI-----DM-SSCEKGEYTIHIILND--------CL 93 (101)
T ss_dssp EEEEEESS-----CCSCEEEEEEETTTCCEEEEEEESSCSE--EEE-----EC-TTSCSEEEEEEEEETT--------EE
T ss_pred EEEEEecc-----CCCcEEEEEEECCCCcEEEEEeccCCcE--EEE-----Ec-CCCcCceEEEEEEeCC--------cE
Confidence 56666654 2446778999987777889988877553 332 22 2445778888888643 66
Q ss_pred eEEEEEE
Q 040458 707 KSGKIVW 713 (732)
Q Consensus 707 ~~G~i~~ 713 (732)
..|....
T Consensus 94 LtG~F~i 100 (101)
T 3sd2_A 94 LEGTFTV 100 (101)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 7776653
No 74
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=25.42 E-value=2.3e+02 Score=27.17 Aligned_cols=63 Identities=11% Similarity=0.075 Sum_probs=39.7
Q ss_pred eEEEEEEEEecCCCCceEEEEE--eCCC-----CcEEEEecceeEEecCCcEEEEEEEEEE--cccccCCCCCCceE
Q 040458 641 STHFIRTVTNVGDPNSAYKVTI--RPPS-----GMTVTVQPEKLVFRRVGQKLNFLVRVEA--TAVKLSPGSSSMKS 708 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~ty~~~v--~~~~-----g~~v~v~p~~l~~~~~~~~~~~~vt~~~--~~~~~~~~~~~~~~ 708 (732)
....+.+|+|.++. ..|-+.+ +... ...+.|+|..+.+ ++|+++.++|.... .. .|...+.+|
T Consensus 15 ~k~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~~~~~---lP~DrESlf 86 (218)
T 2xg5_A 15 EKSMTLDISNDNKQ-LPYLAQAWIENENQEKIITGPVIATPPVQRL-EPGAKSMVRLSTTPDISK---LPQDRESLF 86 (218)
T ss_dssp SSEEEEEEEECCSS-SCEEEEEEEECTTSCEECSSSEEEECSEEEE-CTTCEEEEEEEECGGGGG---SCSSSCEEE
T ss_pred CCEEEEEEEcCCCC-CcEEEEEEEecCCCCccccCCEEEcCCeEEE-CCCCceEEEEEecCCCCC---CCCCceEEE
Confidence 34556788898854 1344433 3221 2347889999998 79999999987665 23 455345444
No 75
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=24.30 E-value=55 Score=29.82 Aligned_cols=31 Identities=29% Similarity=0.306 Sum_probs=26.0
Q ss_pred ecCcccchhHHHHHHHHHHhhCCCCCHHHHHH
Q 040458 502 LSGTSMACPHVSGLAALLKAAHPDWSPAAIRS 533 (732)
Q Consensus 502 ~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~ 533 (732)
+.|-| =|+.|-|.+|||.+.+-..+|+||.+
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 33445 47999999999999999999999874
No 76
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=23.36 E-value=2.5e+02 Score=23.94 Aligned_cols=24 Identities=17% Similarity=0.434 Sum_probs=17.7
Q ss_pred eeEEEEEEEEecCCCC-ceEEEEEe
Q 040458 640 MSTHFIRTVTNVGDPN-SAYKVTIR 663 (732)
Q Consensus 640 ~~~~~~rtvtn~~~~~-~ty~~~v~ 663 (732)
...+++.||+|.|... ..+++.+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEE
Confidence 4789999999999854 34665553
No 77
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=21.49 E-value=2.9e+02 Score=26.90 Aligned_cols=51 Identities=18% Similarity=0.019 Sum_probs=34.6
Q ss_pred EEEEEEEEecCCCCceEEEEE--eCC---CCcEEEEecceeEEecCCcEEEEEEEEEEc
Q 040458 642 THFIRTVTNVGDPNSAYKVTI--RPP---SGMTVTVQPEKLVFRRVGQKLNFLVRVEAT 695 (732)
Q Consensus 642 ~~~~rtvtn~~~~~~ty~~~v--~~~---~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 695 (732)
...+.+|+|.++. .|-+.+ +.. ...-+.|+|..+.+ ++|+++.++|..+..
T Consensus 38 k~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~~ 93 (239)
T 4djm_A 38 SGETLTVINDQDY--PMLVQSEVLSEDQKSPAPFVVTPPLFRL-DGQQSSRLRIVRTGG 93 (239)
T ss_dssp SCEEEEEEECSSS--CEEEEEEEECTTSSSBCSEEEESSEEEE-CTTEEEEEEEEECSC
T ss_pred CEEEEEEEeCCCC--cEEEEEEEEcCCCCccCCEEEcCCeEEE-CCCCceEEEEEECCC
Confidence 4456688898754 355443 221 12448899999998 799999998876543
No 78
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=20.63 E-value=52 Score=29.45 Aligned_cols=33 Identities=24% Similarity=0.200 Sum_probs=27.3
Q ss_pred eeecCcccchhHHHHHHHHHHhhCCCCCHHHHHH
Q 040458 500 NILSGTSMACPHVSGLAALLKAAHPDWSPAAIRS 533 (732)
Q Consensus 500 ~~~sGTSMAaP~VAG~aALl~q~~p~~sp~~ik~ 533 (732)
..+.|-| =|+.|-|.+|||.+.+-..+|+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4445556 47999999999999999999999864
No 79
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=20.28 E-value=1.5e+02 Score=24.61 Aligned_cols=50 Identities=20% Similarity=0.300 Sum_probs=27.7
Q ss_pred eEEEEEEEEecCCCCc----eEEEE-E--------eCCCCcEEEEe-cceeEEecCCcEEEEEEE
Q 040458 641 STHFIRTVTNVGDPNS----AYKVT-I--------RPPSGMTVTVQ-PEKLVFRRVGQKLNFLVR 691 (732)
Q Consensus 641 ~~~~~rtvtn~~~~~~----ty~~~-v--------~~~~g~~v~v~-p~~l~~~~~~~~~~~~vt 691 (732)
..+++.+|+|+|+.+- -|++- + ...-|..+.+. -..+.| ++||++++++.
T Consensus 19 r~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~r~V~LV 82 (101)
T 4ep8_B 19 RATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRF-EPGQKREVELV 82 (101)
T ss_dssp CCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEE-CTTCEEEEEEE
T ss_pred CCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEee-CCCCeEEEEEE
Confidence 4577789999999763 23311 1 11223333331 113456 78999876654
Done!