BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040461
(318 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus
Pfu-264096-001
Length = 186
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 100/141 (70%)
Query: 70 AAHPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFI 129
++P+HDLE GP P V ++EI KGS+ KYELDKKTGL+K+DRVLYS YP +YG I
Sbjct: 8 GSNPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGII 67
Query: 130 PRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHY 189
PRT ED+DP D++V+M+EPV P + AR IGL MID G+KD K++AV +DP +K +
Sbjct: 68 PRTWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDW 127
Query: 190 TDIKELPPHRLTEIRRFFEDY 210
DI ++P L EI FF+ Y
Sbjct: 128 KDIDDVPKAFLDEIAHFFKRY 148
>pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|B Chain B, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
pdb|1UDE|C Chain C, Crystal Structure Of The Inorganic Pyrophosphatase From
The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3
Length = 195
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 100/147 (68%)
Query: 64 LSRRSVAAHPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYP 123
+ R S +P+HDLE GP P V ++EI KGS+ KYELDK+TGL+K+DRVLY+ YP
Sbjct: 11 VPRGSHMMNPFHDLEPGPNVPEVVYALIEIPKGSRNKYELDKETGLLKLDRVLYTPFHYP 70
Query: 124 HNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADD 183
+YG IPRT ED DP D++V+M+EP P + AR IGL MID G+KD K++AV +D
Sbjct: 71 VDYGIIPRTWYEDGDPFDIMVIMREPTYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVED 130
Query: 184 PEYKHYTDIKELPPHRLTEIRRFFEDY 210
P +K + DI ++P L EI FF+ Y
Sbjct: 131 PYFKDWKDISDVPKAFLDEIAHFFKRY 157
>pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|B Chain B, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|C Chain C, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|D Chain D, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|E Chain E, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3I98|F Chain F, X-Ray Crystallographic Structure Of Inorganic
Pyrophosphatase At 298k From Archaeon Thermococcus
Thioreducens
pdb|3Q4W|A Chain A, The Structure Of Archaeal Inorganic Pyrophosphatase In
Complex With Substrate
pdb|3Q5V|A Chain A, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q5V|B Chain B, The Structure Of Inorganic Pyrophosphatase From
Thermococcus Thioreducens In Complex With Magnesium And
Sulfate
pdb|3Q9M|A Chain A, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|B Chain B, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q9M|C Chain C, The Structure Archaeal Inorganic Pyrophosphatase In
Complex With Pyrophosphate
pdb|3Q3L|A Chain A, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|B Chain B, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|C Chain C, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|D Chain D, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|E Chain E, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3Q3L|F Chain F, The Neutron Crystallographic Structure Of Inorganic
Pyrophosphatase From Thermococcus Thioreducens
pdb|3R5U|A Chain A, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5U|B Chain B, The Structure Of Manganese Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase
pdb|3R5V|A Chain A, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|B Chain B, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|C Chain C, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|D Chain D, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|E Chain E, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
pdb|3R5V|F Chain F, The Structure Of Calcium Bound Thermococcus Thioreducens
Inorganic Pyrophosphatase At 298k
Length = 178
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 97/139 (69%)
Query: 72 HPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPR 131
+P+H+LE GP P V ++EI KGS+ KYELDKKTGL+K+DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 132 TLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTD 191
T +D DP D++V+M+EPV P + AR IG+M M D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 192 IKELPPHRLTEIRRFFEDY 210
I ++P L EI FF+ Y
Sbjct: 122 ISDVPKAFLDEIAHFFQRY 140
>pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From
Thermococcus Thioreducens Bound To Hydrolyzed Product At
0.99 Angstrom Resolution
Length = 178
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 96/139 (69%)
Query: 72 HPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPR 131
+P+H+LE GP P V ++EI KGS+ KYELDK TGL+K+DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 132 TLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTD 191
T +D DP D++V+M+EPV P + AR IG+M M D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 192 IKELPPHRLTEIRRFFEDY 210
I ++P L EI FF+ Y
Sbjct: 122 ISDVPKAFLDEIAHFFQRY 140
>pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|B Chain B, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|C Chain C, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|D Chain D, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|E Chain E, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
pdb|3R6E|F Chain F, The Structure Of Thermococcus Thioreducens' Inorganic
Pyrophosphatase Bound To Sulfate
Length = 178
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 93/139 (66%)
Query: 72 HPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPR 131
+P+H+LE GP P V ++EI KGS+ KYELDKKTGL+K+DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 132 TLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTD 191
T +D DP D+ V+ +EPV P + AR IG+ D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIXVIXREPVYPLTIIEARPIGIXKXEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 192 IKELPPHRLTEIRRFFEDY 210
I ++P L EI FF+ Y
Sbjct: 122 ISDVPKAFLDEIAHFFQRY 140
>pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|B Chain B, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|C Chain C, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|D Chain D, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|E Chain E, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase.
pdb|1QEZ|F Chain F, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An
Archael Pyrophosphatase
Length = 173
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/136 (50%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
Query: 77 LEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCED 136
L G AP+V N +VEI +GS +KYE D + G+IKVDRVLY+S+ YP NYGFIP TL ED
Sbjct: 3 LSPGKNAPDVVNVLVEIPQGSNIKYEYDDEEGVIKVDRVLYTSMNYPFNYGFIPGTLEED 62
Query: 137 NDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYTDIKE 194
DPLDVLV+ + PG + R IG++ M D+ +D KI+AV D DP + + DI +
Sbjct: 63 GDPLDVLVITNYQLYPGSVIEVRPIGILYMKDEEGEDAKIVAVPKDKTDPSFSNIKDIND 122
Query: 195 LPPHRLTEIRRFFEDY 210
LP +I FFE Y
Sbjct: 123 LPQATKNKIVHFFEHY 138
>pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|B Chain B, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
pdb|2UXS|C Chain C, 2.7a Crystal Structure Of Inorganic Pyrophosphatase
(rv3628) From Mycobacterium Tuberculosis At Ph 7.5
Length = 169
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 81/124 (65%)
Query: 87 FNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLM 146
F+ +EI KG + KYE+D +TG +++DR LY+ + YP +YGFI TL +D DPLD LVL+
Sbjct: 10 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 69
Query: 147 QEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRF 206
+PV PG + AR +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 70 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 129
Query: 207 FEDY 210
F Y
Sbjct: 130 FVHY 133
>pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0
Length = 172
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 81/124 (65%)
Query: 87 FNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLM 146
F+ +EI KG + KYE+D +TG +++DR LY+ + YP +YGFI TL +D DPLD LVL+
Sbjct: 13 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 72
Query: 147 QEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRF 206
+PV PG + AR +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 73 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 132
Query: 207 FEDY 210
F Y
Sbjct: 133 FVHY 136
>pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium
Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0
Length = 171
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 81/124 (65%)
Query: 87 FNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLM 146
F+ +EI KG + KYE+D +TG +++DR LY+ + YP +YGFI TL +D DPLD LVL+
Sbjct: 12 FDVTIEIPKGQRNKYEVDHETGRVRLDRYLYTPMAYPTDYGFIEDTLGDDGDPLDALVLL 71
Query: 147 QEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRF 206
+PV PG + AR +G+ M+D+ DDK++ V A DP + H DI ++P L I+ F
Sbjct: 72 PQPVFPGVLVAARPVGMFRMVDEHGGDDKVLCVPAGDPRWDHVQDIGDVPAFELDAIKHF 131
Query: 207 FEDY 210
F Y
Sbjct: 132 FVHY 135
>pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
pdb|4ECP|B Chain B, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa
From Mycobacterium Leprae
Length = 167
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 83/131 (63%)
Query: 80 GPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDP 139
GPG+ F+ +EI KG + KYE+D KTG +++DR LY+ + YP +YGFI TL ED DP
Sbjct: 1 GPGSMVQFDVTIEIPKGQRNKYEVDHKTGRVRLDRYLYTPMAYPTDYGFIEDTLGEDGDP 60
Query: 140 LDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHR 199
LD LVL+ EP+ PG + AR +G+ M+D+ DDK++ V +D + H I ++P
Sbjct: 61 LDALVLLPEPLFPGVLVEARPVGMFRMVDEHGGDDKVLCVPVNDHRWDHIHGIIDVPTFE 120
Query: 200 LTEIRRFFEDY 210
L I+ FF Y
Sbjct: 121 LDAIKHFFVHY 131
>pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
pdb|3SW5|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Bartonella Henselae
Length = 180
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 86/138 (62%), Gaps = 3/138 (2%)
Query: 76 DLEIGPGAPNVFNCVVEITKGSK-VKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLC 134
++ +G P N +VE++ G + +KYE+DKK+G + VDR LY+S+VYP NYGF+P TL
Sbjct: 9 EIAVGKNPPEDVNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSMVYPGNYGFVPHTLS 68
Query: 135 EDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADD--PEYKHYTDI 192
ED DP+DVL+ P+LPGC + IG + M D G KD+KIIA+ Y + D
Sbjct: 69 EDGDPIDVLICNTRPLLPGCVINVYPIGALIMEDDGGKDEKIIAIPTPKLTQRYNNIHDY 128
Query: 193 KELPPHRLTEIRRFFEDY 210
+LP L +I FFE Y
Sbjct: 129 TDLPEITLKQIEHFFEHY 146
>pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
pdb|2BQY|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium
Helicobacter Pylori-Kinetic And Structural Properties
Length = 173
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 80/124 (64%), Gaps = 2/124 (1%)
Query: 89 CVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQE 148
V+EI+K S +KYELDK++G + VDRVLY + YP NYGF+P TL D DP+D LVL
Sbjct: 17 VVIEISKHSNIKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDV 76
Query: 149 PVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYTDIKELPPHRLTEIRRF 206
G ++AR +G++ M D+ D+K+IA+ D DP + + DI +L H L +I+ F
Sbjct: 77 AFQAGSVVKARLVGVLNMEDESGMDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHF 136
Query: 207 FEDY 210
FE Y
Sbjct: 137 FETY 140
>pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Thermus Thermophilus
Length = 174
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 81/134 (60%)
Query: 77 LEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCED 136
L +G AP V + V+E+ +GS KYE D G IK+DRVL + YP +YGFIP TL ED
Sbjct: 6 LPVGDKAPEVVHMVIEVPRGSGNKYEYDPDLGAIKLDRVLPGAQFYPGDYGFIPSTLAED 65
Query: 137 NDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELP 196
DPLD LVL P+LPG + R +GL+ M D+ D K+I V A+D H DI ++P
Sbjct: 66 GDPLDGLVLSTYPLLPGVVVEVRVVGLLLMEDEKGGDAKVIGVVAEDQRLDHIQDIGDVP 125
Query: 197 PHRLTEIRRFFEDY 210
EI+ FFE Y
Sbjct: 126 EGVKQEIQHFFETY 139
>pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|C Chain C, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|D Chain D, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|E Chain E, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|F Chain F, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|G Chain G, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|H Chain H, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|I Chain I, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|J Chain J, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|K Chain K, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
pdb|3FQ3|L Chain L, Crystal Structure Of Inorganic Phosphatase From Brucella
Melitensis
Length = 197
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
Query: 77 LEIGPGAPNVFNCVVEITKGSK-VKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCE 135
+ IG P N ++E+ G + +KYE+DKK G + VDR LY+ + YP NYGF+P TL E
Sbjct: 27 ISIGSNPPEDVNVIIEVPVGGQPIKYEMDKKAGALIVDRFLYTPMTYPGNYGFVPHTLSE 86
Query: 136 DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYTDIK 193
D DP+DVLV P++PGC + R IG++ M D KD+KIIAV + Y+ D
Sbjct: 87 DGDPIDVLVCNTRPLIPGCVINVRPIGVLVMEDNSGKDEKIIAVPSPHLTRRYEKIHDYT 146
Query: 194 ELPPHRLTEIRRFFEDY 210
++P L +I FFE Y
Sbjct: 147 DMPEITLKQIAHFFEHY 163
>pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|D Chain D, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|E Chain E, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
pdb|1YGZ|F Chain F, Crystal Structure Of Inorganic Pyrophosphatase From
Helicobacter Pylori
Length = 173
Score = 114 bits (285), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 79/124 (63%), Gaps = 2/124 (1%)
Query: 89 CVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQE 148
V+EI+K S +KYELDK++G + VDRVLY + YP NYGF+P TL D DP+D LVL
Sbjct: 17 VVIEISKHSNIKYELDKESGALXVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDV 76
Query: 149 PVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYTDIKELPPHRLTEIRRF 206
G ++AR +G++ D+ D+K+IA+ D DP + + DI +L H L +I+ F
Sbjct: 77 AFQAGSVVKARLVGVLNXEDESGXDEKLIALPIDKIDPTHSYVKDIDDLSKHTLDKIKHF 136
Query: 207 FEDY 210
FE Y
Sbjct: 137 FETY 140
>pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|B Chain B, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3D63|C Chain C, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei
pdb|3EIY|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound Pyrophosphate
pdb|3EIZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei, H32 Crystal Form
pdb|3EJ0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound
N-(Pyridin-3-Ylmethyl) Aniline, H32 Crystal Form
pdb|3EJ2|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Burkholderia Pseudomallei With Bound 5-Amino-1-(4-
Chlorophenyl)-1h-Pyrazole-4-Carbonitrile, H32 Crystal
Form
pdb|3GVF|A Chain A, 1.7 Angstrom Crystal Structure Of Inorganic
Pyrophosphatase From Burkholderia Pseudomallei Bound
With Phosphate
Length = 196
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 82/134 (61%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEITKGSK-VKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P FN ++EI S+ VKYE DK GL+ VDR + + + YP NYGFIP+TL D D
Sbjct: 30 GKDLPQDFNVIIEIPAQSEPVKYEADKALGLLVVDRFIGTGMRYPVNYGFIPQTLSGDGD 89
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADD--PEYKHYTDIKELP 196
P+DVLV+ P+L G +RARA+G++ M D+ D K++AV D P + I ++P
Sbjct: 90 PVDVLVITPFPLLAGSVVRARALGMLKMTDESGVDAKLVAVPHDKVCPMTANLKSIDDVP 149
Query: 197 PHRLTEIRRFFEDY 210
+ +I+ FFE Y
Sbjct: 150 AYLKDQIKHFFEQY 163
>pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
pdb|3LD3|B Chain B, Crystal Structure Of Inorganic Phosphatase From Anaplasma
Phagocytophilum At 1.75a Resolution
Length = 199
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 83/138 (60%), Gaps = 3/138 (2%)
Query: 76 DLEIGPGAPNVFNCVVEITKGSK-VKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLC 134
D+ G AP N V+E+++ S VKYE D+K G + VDR L +++ YP NYGFIP T+
Sbjct: 26 DIGSGSNAPEEVNVVIEVSQDSHPVKYEFDEKNGALWVDRFLPTAMYYPCNYGFIPNTIA 85
Query: 135 EDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYTDI 192
D DP+DVLVL + PV+PG + R +G++ M D+ +D K++AV A D Y + +
Sbjct: 86 GDGDPVDVLVLARFPVMPGAVICVRPVGVLMMNDEKGEDAKVLAVPATKVDQYYGNIVNY 145
Query: 193 KELPPHRLTEIRRFFEDY 210
+LP L I FF Y
Sbjct: 146 SDLPSSFLDSISHFFSFY 163
>pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3D53|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii
pdb|3EMJ|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|B Chain B, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|C Chain C, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|D Chain D, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|E Chain E, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|F Chain F, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|G Chain G, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|H Chain H, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|I Chain I, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|J Chain J, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|K Chain K, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
pdb|3EMJ|L Chain L, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From
Rickettsia Prowazekii (P21 Form)
Length = 173
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 78/129 (60%), Gaps = 3/129 (2%)
Query: 85 NVFNCVVEITKGSK-VKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVL 143
N N ++EI S +KYE DK++G + VDR + +++ YP NYGFIP TL D DP+DVL
Sbjct: 14 NEINVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVL 73
Query: 144 VLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYTDIKELPPHRLT 201
V+ PV+PG ++ RAIG++ M D+ D+KIIAV D + H ++ +L
Sbjct: 74 VVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKK 133
Query: 202 EIRRFFEDY 210
I FFE Y
Sbjct: 134 RIVHFFEHY 142
>pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|B Chain B, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|C Chain C, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|D Chain D, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|E Chain E, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
pdb|3TR4|F Chain F, Structure Of An Inorganic Pyrophosphatase (Ppa) From
Coxiella Burnetii
Length = 178
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 87 FNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVL 145
FN ++EI G +VKYE DK+ G + VDR +S YP NYGF+P TL +D DPLDVLVL
Sbjct: 17 FNVIIEIPANGGEVKYEYDKELGFLTVDRFXPTSXRYPCNYGFVPSTLAQDGDPLDVLVL 76
Query: 146 MQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDP--EYKHYTDIKELPPHRLTEI 203
PV PG R RA+G+ D+ +D K++AV Y+ +K++ L I
Sbjct: 77 TPVPVQPGVLXRVRALGIXKXEDEAGEDSKVLAVPVVKACRAYEAIQSLKDISSLLLDAI 136
Query: 204 RRFFEDY 210
FFE Y
Sbjct: 137 SHFFERY 143
>pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From
Ehrlichia Chaffeensis
Length = 193
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEITKGS-KVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P N ++EI++ S VKYE DK+ L VDR L +S+ YP NYGFIP T D D
Sbjct: 30 GDNVPKEINVIIEISQNSCPVKYEFDKEKNLFCVDRFLPTSMYYPCNYGFIPHTCAGDGD 89
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD--DPEYKHYTDIKELP 196
P+DVLV + PV+ G +RAR +G++ M D+ +D KI+AV D Y + D + P
Sbjct: 90 PVDVLVASRFPVMSGAVIRARPVGVLVMHDESGEDVKILAVPTHKVDQYYNNIKDYSDFP 149
Query: 197 PHRLTEIRRFFEDY 210
L I FF Y
Sbjct: 150 VSFLNSISHFFTFY 163
>pdb|2EIP|A Chain A, Inorganic Pyrophosphatase
pdb|2EIP|B Chain B, Inorganic Pyrophosphatase
pdb|1IPW|A Chain A, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1IPW|B Chain B, Inorganic Pyrophosphatase From Escherichia Coli With Three
Magnesium Ions
pdb|1JFD|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1JFD|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1FAJ|A Chain A, Inorganic Pyrophosphatase
pdb|1INO|A Chain A, Recombinant Inorganic Pyrophosphatase From Escherichia
Coli
Length = 175
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P V+EI +KYE+DK++G + VDR + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYTDIKELP 196
P+DVLV P+ PG +R R +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 197 PHRLTEIRRFFEDY 210
+I FFE Y
Sbjct: 128 ELLKAQIAHFFEHY 141
>pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1OBW|C Chain C, Structure Of Inorganic Pyrophosphatase
pdb|1I6T|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1I40|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|2AU6|A Chain A, Crystal Structure Of Catalytic Intermediate Of Inorganic
Pyrophosphatase
pdb|2AU8|A Chain A, Catalytic Intermediate Structure Of Inorganic
Pyrophosphatase
pdb|2AU9|A Chain A, Inorganic Pyrophosphatase Complexed With Substrate
pdb|2AUU|A Chain A, Inorganic Pyrophosphatase Complexed With Magnesium
Pyrophosphate And Fluoride
pdb|1IGP|A Chain A, X-Ray Crystallographic Studies Of Recombinant Inorganic
Pyrophosphatase From Escherichia Coli
Length = 175
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P V+EI +KYE+DK++G + VDR + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYTDIKELP 196
P+DVLV P+ PG R R +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 197 PHRLTEIRRFFEDY 210
+I FFE Y
Sbjct: 128 ELLKAQIAHFFEHY 141
>pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n
Length = 175
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P V+EI +KYE+DK++G + VDR + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYTDIKELP 196
P+DVLV P+ PG +R R +G++ M ++ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVIRCRPVGVLKMTNEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 197 PHRLTEIRRFFEDY 210
+I FFE Y
Sbjct: 128 ELLKAQIAHFFEHY 141
>pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n
pdb|1MJW|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D42n
Length = 175
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P V+EI +KYE+DK++G + V+R + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVNRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYTDIKELP 196
P+DVLV P+ PG +R R +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 197 PHRLTEIRRFFEDY 210
+I FFE Y
Sbjct: 128 ELLKAQIAHFFEHY 141
>pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n
pdb|1MJX|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D65n
Length = 175
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P V+EI +KYE+DK++G + VDR + +++ YP NYG+I TL + D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLNGD 67
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYTDIKELP 196
P+DVLV P+ PG +R R +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 197 PHRLTEIRRFFEDY 210
+I FFE Y
Sbjct: 128 ELLKAQIAHFFEHY 141
>pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n
pdb|1MJY|B Chain B, Structure Of Inorganic Pyrophosphatase Mutant D70n
Length = 175
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P V+EI +KYE+DK++G + VDR + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDRFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYTDIKELP 196
P++VLV P+ PG R R +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVNVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 197 PHRLTEIRRFFEDY 210
+I FFE Y
Sbjct: 128 ELLKAQIAHFFEHY 141
>pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic
Pyrophosphatase
Length = 175
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G P V+EI +KYE+DK++G + VD+ + +++ YP NYG+I TL D D
Sbjct: 8 GKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDQFMSTAMFYPCNYGYINHTLSLDGD 67
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAV--CADDPEYKHYTDIKELP 196
P+DVLV P+ PG R R +G++ M D+ +D K++AV EY H D+ +LP
Sbjct: 68 PVDVLVPTPYPLQPGSVTRCRPVGVLKMTDEAGEDAKLVAVPHSKLSKEYDHIKDVNDLP 127
Query: 197 PHRLTEIRRFFEDY 210
+I FFE Y
Sbjct: 128 ELLKAQIAHFFEHY 141
>pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The
Oil- Degrading Bacterium Oleispira Antarctica
Length = 176
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 80 GPGAPNVFNCVVEI-TKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDND 138
G PN +EI S +KYE+DK + VDR + YP NYG+I TL +D D
Sbjct: 10 GKDLPNDIYVAIEIPANASPIKYEIDKDXDALLVDRFXATPXFYPANYGYINNTLADDGD 69
Query: 139 PLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPE--YKHYTDIKELP 196
LDVLV+ PV PG +RAR +G++ D+ D+K++AV + Y DI ++P
Sbjct: 70 ALDVLVITPYPVAPGSVIRARPVGVLKXSDEAGGDEKLLAVPHEKLTQLYNDIHDIDDVP 129
Query: 197 PHRLTEIRRFFEDY 210
+I FFE Y
Sbjct: 130 QLLKDQIVHFFEHY 143
>pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|8PRK|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G +K R + Y HNYG P+T
Sbjct: 42 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLKFVRNCFPHHGYIHNYGAFPQTW 101
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 102 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 161
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 162 NDPLAPKLNDIEDV 175
>pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGI|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1WGJ|B Chain B, Structure Of Inorganic Pyrophosphatase
pdb|1E6A|A Chain A, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|1E6A|B Chain B, Fluoride-Inhibited Substrate Complex Of Saccharomyces
Cerevisiae Inorganic Pyrophosphatase
pdb|2IHP|A Chain A, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|2IHP|B Chain B, Yeast Inorganic Pyrophosphatase With Magnesium And
Phosphate
pdb|1E9G|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1E9G|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 286
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUJ|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITREETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase
pdb|1M38|B Chain B, Structure Of Inorganic Pyrophosphatase
Length = 287
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 42 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 101
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 102 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 161
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 162 NDPLAPKLNDIEDV 175
>pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
pdb|1HUK|B Chain B, Refined Structure Of Yeast Inorganic Pyrophosphatase And
Its K61r Mutant
Length = 281
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
pdb|2IK0|B Chain B, Yeast Inorganic Pyrophosphatase Variant E48d With
Magnesium And Phosphate
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VV+I + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVDIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
pdb|2IK1|B Chain B, Yeast Inorganic Pyrophosphatase Variant Y93f With
Magnesium And Phosphate
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HN+G P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNFGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
pdb|2IK7|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120n With
Magnesium And Phosphate
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP++VL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPINVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|117E|B Chain B, The R78k And D117e Active Site Variants Of Saccharomyces
Cerevisiae Soluble Inorganic Pyrophosphatase: Structural
Studies And Mechanistic Implications
pdb|2IK4|A Chain A, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
pdb|2IK4|B Chain B, Yeast Inorganic Pyrophosphatase Variant D117e With
Magnesium And Phosphate
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DN+P+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNEPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
pdb|2IK6|B Chain B, Yeast Inorganic Pyrophosphatase Variant D120e With
Magnesium And Phosphate
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP++VL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPIEVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
pdb|2IK9|B Chain B, Yeast Inorganic Pyrophosphatase Variant D152e With
Magnesium And Phosphate
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE + K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETEWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
pdb|2IK2|B Chain B, Yeast Inorganic Pyrophosphatase Variant D115e With
Magnesium And Phosphate
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D K G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ +NDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGENDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|1YPP|A Chain A, Acid Anhydride Hydrolase
pdb|1YPP|B Chain B, Acid Anhydride Hydrolase
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 85 NVFNCVVEITKGSKVKYEL-----------DKKTGLIKVDRVLYSSVVYPHNYGFIPRTL 133
N+FN VVEI + + K E+ D G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTAKGKLRFVRNCFPHHGYIHNYGAFPQTW 100
Query: 134 CE------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCA 181
+ DNDP+DVL + + G + +A+G+M ++D+GE D K+IA+
Sbjct: 101 EDPNVSHPETKAVGDNDPIDVLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI 160
Query: 182 DDPEYKHYTDIKEL 195
+DP DI+++
Sbjct: 161 NDPLAPKLNDIEDV 174
>pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
pdb|1PYP|B Chain B, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From
Baker,S Yeast At The 3 Angstroms Resolution (Russian)
Length = 285
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 22/133 (16%)
Query: 85 NVFNCVVEITKGSKVKYELDKK----------TGLIKVDRVLYSSVVYPHNYGFIPRTLC 134
N+FN VVEI + + K E+ K+ G ++ R + Y HNYG P+T
Sbjct: 41 NIFNMVVEIPRWTNAKLEITKEETLNPIIQNTKGKLRFVRNCFPHHGYIHNYGAFPQTWE 100
Query: 135 E------------DNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD 182
+ DN+P+DVL + + G +A+G+M ++D+GE D K+IA+ +
Sbjct: 101 DPNVSHPETKAVGDNNPIDVLQIGETIAYTGQVKEVKALGIMALLDEGETDWKVIAIDIN 160
Query: 183 DPEYKHYTDIKEL 195
DP DI+++
Sbjct: 161 DPLAPKLNDIEDV 173
>pdb|1DGS|A Chain A, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
pdb|1DGS|B Chain B, Crystal Structure Of Nad+-Dependent Dna Ligase From T.
Filiformis
Length = 667
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 227 STAVEAIQYSMCVRPKLSFNFEADWAILFVYDNFQPTELFFNWQGPLCRVHYAFPEAIGE 286
+ VE + Y + + + FEAD +L + D EL + + P + Y FP E
Sbjct: 261 AEGVEEV-YRRGLAQRHALPFEADGVVLKLDDLTLWGELGYTARAPRFALAYKFPAEEKE 319
Query: 287 PYIPPIVFQLGGGG 300
+ +VFQ+G G
Sbjct: 320 TRLLDVVFQVGRTG 333
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.142 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,408,414
Number of Sequences: 62578
Number of extensions: 373738
Number of successful extensions: 896
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 812
Number of HSP's gapped (non-prelim): 43
length of query: 318
length of database: 14,973,337
effective HSP length: 99
effective length of query: 219
effective length of database: 8,778,115
effective search space: 1922407185
effective search space used: 1922407185
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)