Query 040462
Match_columns 726
No_of_seqs 435 out of 3182
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 13:52:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040462.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040462hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 4E-125 1E-129 1089.7 50.7 594 112-722 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 1E-119 4E-124 1047.0 48.4 599 112-721 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 4.2E-82 1.4E-86 761.4 47.2 520 117-721 2-605 (926)
4 3afg_A Subtilisin-like serine 100.0 2.6E-61 8.9E-66 548.6 34.2 363 30-583 33-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 3.4E-58 1.2E-62 506.5 24.2 339 32-582 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 1.1E-56 3.6E-61 506.7 28.2 352 31-582 43-465 (471)
7 2p4e_P Proprotein convertase s 100.0 1.1E-57 3.8E-62 521.4 7.3 334 32-556 75-421 (692)
8 1r6v_A Subtilisin-like serine 100.0 1.7E-54 5.9E-59 498.3 27.7 370 30-593 29-450 (671)
9 1y9z_A Alkaline serine proteas 100.0 3.2E-55 1.1E-59 489.6 21.0 380 114-603 4-437 (441)
10 1dbi_A AK.1 serine protease; h 100.0 9.3E-52 3.2E-56 434.1 25.8 266 114-581 11-279 (280)
11 1r0r_E Subtilisin carlsberg; h 100.0 7.4E-52 2.5E-56 433.6 23.4 264 114-581 4-274 (274)
12 1gci_A Subtilisin; hydrolase, 100.0 1.1E-51 3.8E-56 430.7 24.4 263 114-581 4-269 (269)
13 4h6x_A Thiazoline oxidase/subt 100.0 1.7E-53 5.8E-58 462.6 10.3 297 118-581 17-337 (357)
14 1to2_E Subtilisin BPN'; serine 100.0 9.8E-52 3.3E-56 434.1 22.0 266 114-582 4-276 (281)
15 1thm_A Thermitase; hydrolase(s 100.0 4E-51 1.4E-55 429.2 24.9 264 114-581 11-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 4E-51 1.4E-55 438.5 20.6 273 112-581 19-310 (327)
17 2ixt_A 36KDA protease; serine 100.0 5.4E-50 1.8E-54 427.6 26.3 288 112-576 4-309 (310)
18 3zxy_A Subtilisin-like protein 100.0 8.7E-51 3E-55 427.8 17.6 265 129-581 3-274 (282)
19 4h6w_A N-terminal cyanobactin 100.0 6.6E-51 2.3E-55 434.0 15.9 276 117-581 6-287 (306)
20 2iy9_A SUBA; toxin, shiga, pla 100.0 1.5E-50 5.2E-55 438.6 17.8 279 113-582 22-329 (347)
21 3lpc_A APRB2; protease, subtil 100.0 2.5E-50 8.7E-55 435.8 18.8 289 113-582 8-337 (340)
22 2z30_A TK-subtilisin; thermoco 100.0 2.9E-50 1E-54 431.1 18.5 273 113-582 7-317 (320)
23 1wmd_A Protease; alpha-beta hy 100.0 4.7E-49 1.6E-53 439.3 21.9 297 116-583 5-319 (434)
24 1sh7_A Extracellular subtilisi 100.0 6.3E-48 2.2E-52 405.4 24.6 235 124-559 20-258 (284)
25 3lxu_X Tripeptidyl-peptidase 2 100.0 3.2E-47 1.1E-51 455.0 27.2 399 134-720 214-651 (1354)
26 2b6n_A Proteinase K; S binding 100.0 1.5E-47 5.2E-52 401.8 21.2 235 124-557 22-260 (278)
27 2pwa_A Proteinase K; structure 100.0 1.6E-47 5.5E-52 401.2 20.0 240 125-577 24-272 (279)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 3.8E-47 1.3E-51 398.8 22.6 235 124-559 22-260 (276)
29 2oxa_A Extracellular serine pr 100.0 1.6E-47 5.6E-52 443.0 18.0 293 119-587 57-430 (600)
30 1p8j_A Furin precursor; prohor 100.0 1.3E-46 4.5E-51 423.2 18.2 287 119-584 25-332 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 8.1E-46 2.8E-50 419.6 21.0 279 119-584 41-344 (503)
32 3f7m_A Alkaline serine proteas 100.0 5.6E-46 1.9E-50 390.5 17.6 228 124-557 24-260 (279)
33 2qtw_B Proprotein convertase s 100.0 2.4E-45 8.2E-50 409.5 20.9 245 124-556 17-269 (546)
34 3hjr_A Extracellular serine pr 100.0 2.7E-43 9.2E-48 408.9 22.7 286 124-584 61-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.1E-25 3.6E-30 255.7 4.6 98 223-324 274-384 (552)
36 1ga6_A Serine-carboxyl protein 99.9 3.5E-22 1.2E-26 216.3 10.2 101 224-324 90-207 (372)
37 2w2n_P Proprotein convertase s 99.0 6.3E-10 2.1E-14 99.3 7.0 79 30-110 35-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 99.0 1.3E-09 4.5E-14 122.8 10.2 99 225-324 263-375 (544)
39 3cnq_P Subtilisin BPN'; unclea 98.9 5E-09 1.7E-13 87.5 9.4 74 30-114 6-79 (80)
40 2qtw_A Proprotein convertase s 98.7 2.7E-08 9.4E-13 89.8 7.0 78 31-110 46-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.5 4.1E-07 1.4E-11 74.9 7.8 70 33-110 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 97.5 0.00045 1.5E-08 66.8 9.8 82 370-451 82-183 (194)
43 2z30_B TK-subtilisin; thermoco 97.1 0.0006 2.1E-08 53.9 5.5 62 33-109 2-63 (65)
44 3iib_A Peptidase M28; YP_92679 91.9 0.3 1E-05 53.6 8.1 71 381-451 124-223 (444)
45 2ek8_A Aminopeptidase; metallo 90.6 0.4 1.4E-05 52.2 7.4 61 382-442 111-182 (421)
46 3lxu_X Tripeptidyl-peptidase 2 86.3 0.32 1.1E-05 59.6 3.1 25 129-153 32-56 (1354)
47 3kas_A Transferrin receptor pr 82.7 0.98 3.3E-05 51.7 4.9 61 382-442 128-230 (640)
48 3fed_A Glutamate carboxypeptid 82.2 1.1 3.8E-05 51.9 5.1 63 381-443 150-268 (707)
49 1y9z_A Alkaline serine proteas 80.9 1 3.5E-05 49.2 4.2 31 461-499 182-212 (441)
50 2ys4_A Hydrocephalus-inducing 69.0 6.1 0.00021 34.6 5.2 68 645-717 42-114 (122)
51 2r39_A FIXG-related protein; s 61.6 23 0.00079 30.7 7.5 47 645-692 32-85 (118)
52 3sd2_A Putative member of DUF3 38.8 1.8E+02 0.006 24.5 8.7 64 633-705 35-99 (101)
53 1wgl_A TOLL-interacting protei 35.3 24 0.00081 26.7 2.7 35 521-555 3-37 (59)
54 2x41_A Beta-glucosidase; hydro 35.1 58 0.002 37.7 7.2 66 626-692 595-678 (721)
55 3zyz_A Beta-D-glucoside glucoh 34.7 82 0.0028 36.3 8.4 47 645-692 614-675 (713)
56 2e6j_A Hydin protein; PAPD, st 33.9 33 0.0011 28.9 3.8 59 645-707 27-93 (112)
57 4ep8_B Urease subunit beta; al 32.7 64 0.0022 27.0 5.0 41 645-686 19-81 (101)
58 2bp3_A Filamin A; structural p 31.1 1.9E+02 0.0067 23.5 8.1 66 651-722 28-94 (97)
59 3abz_A Beta-glucosidase I; gly 30.3 1.2E+02 0.0041 35.7 8.9 168 513-706 618-819 (845)
60 2ee6_A Filamin-B; beta-sandwic 29.0 1.2E+02 0.004 25.4 6.4 62 658-725 40-102 (105)
61 2w0p_A Filamin-A; alternative 27.4 1.6E+02 0.0054 23.9 6.8 60 658-723 32-92 (94)
62 2k9u_A Gamma filamin; cytoskel 26.4 3E+02 0.01 23.4 9.0 67 651-723 40-107 (119)
63 1ni7_A ER75, hypothetical prot 22.8 58 0.002 29.7 3.5 31 517-548 79-109 (155)
64 4ubp_B Protein (urease (chain 22.1 1E+02 0.0035 26.9 4.6 41 645-686 25-87 (126)
65 4ac7_B Urease subunit beta; hy 22.1 1E+02 0.0035 26.9 4.6 41 645-686 25-87 (126)
66 2qsv_A Uncharacterized protein 20.6 5.4E+02 0.019 24.3 11.4 73 645-720 20-104 (220)
67 3qbt_B Inositol polyphosphate 20.6 3.4E+02 0.012 23.8 8.2 79 645-723 44-139 (140)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=4.4e-125 Score=1089.69 Aligned_cols=594 Identities=40% Similarity=0.649 Sum_probs=539.4
Q ss_pred cCCCccccccch--hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcc---cCCceeeeeeecC
Q 040462 112 TTRSWDFMGLNQ--SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNF---TCNNKLIGARYYT 186 (726)
Q Consensus 112 ~~~s~~~~g~~~--~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f---~~n~klig~~~~~ 186 (726)
|+++|+|+|+++ .+|+.+.+|+||+|||||||||++||+|.+.|++|+|.+|+|.|+.+.+| .||+|++++++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 578999999984 59999999999999999999999999999999999999999999999988 6999999999995
Q ss_pred ------------CCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCCCHHHHHHHHHH
Q 040462 187 ------------TDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGCASTDILAAFDD 254 (726)
Q Consensus 187 ------------~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ 254 (726)
+..+++|.+||||||||||||+.+++.+++|++.|++.||||+|+|++||+|+..||..+++++||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~ 160 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQ 160 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHH
Confidence 23578899999999999999999999999999999999999999999999999888999999999999
Q ss_pred HHhCCCeEEEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeC
Q 040462 255 AIADGVDIITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLG 334 (726)
Q Consensus 255 A~~~gvdVIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g 334 (726)
|+++|+||||||||.. ...+..+++++++++|.++||+||+||||+|+...++++.+||+|+|||++.||.|.+.+.++
T Consensus 161 A~~~gvdVIn~SlG~~-~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lg 239 (649)
T 3i6s_A 161 AVADGVDMISISYGYR-FIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLG 239 (649)
T ss_dssp HHHTTCSEEEECCCCC-SCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEET
T ss_pred HHHcCCCEEEeCCccC-CcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeC
Confidence 9999999999999987 567888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCc--cceEEEEEe-----cchhHHHHhcCceE
Q 040462 335 NGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLV--KGKIVMCSK-----FDGYTEVHKVGAAG 407 (726)
Q Consensus 335 ~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkiv~~~~-----~~~~~~~~~~Ga~g 407 (726)
|++++.|.+++........+|+++.. ....|.+..+++.++ +||||+|++ .+|..+++++|+.|
T Consensus 240 ng~~~~g~sl~~~~~~~~~~plv~~~---------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g 310 (649)
T 3i6s_A 240 NGLKIRGWSLFPARAFVRDSPVIYNK---------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAA 310 (649)
T ss_dssp TSCEEEEECCCSSCBCEEEEEEECCT---------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEE
T ss_pred CCcEEeeeecccCcccCcceeeEecc---------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceE
Confidence 99999999998877667789999965 346899999998888 999999998 67889999999999
Q ss_pred EEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEE-eeeeeecCCCCCcccccCCCCCCCCCCCCcCCceE
Q 040462 408 SILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEI-LKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDIS 486 (726)
Q Consensus 408 ~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i-~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~ 486 (726)
+|++|+........+.+|.++|+.++++.|++|++++.+++++| +..+..+..+++.++.||||||+...+++|||||+
T Consensus 311 ~i~~n~~~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~ 390 (649)
T 3i6s_A 311 IFISEDPGVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDIL 390 (649)
T ss_dssp EEECCCGGGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEE
T ss_pred EEEecCccccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEE
Confidence 99999885555556899999999999999999999999999999 88888888899999999999999988899999999
Q ss_pred eCCccEEeecCCCCCCCCCCCCc-cccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCC----
Q 040462 487 APGVDILAAVSPLAPISTDPEDK-RRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSK---- 561 (726)
Q Consensus 487 APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~---- 561 (726)
|||++|+++|+....+.....+. +...|..+||||||||||||++|||||+||+|||++||++||+||+++...+
T Consensus 391 APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~ 470 (649)
T 3i6s_A 391 APGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIK 470 (649)
T ss_dssp EECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCE
T ss_pred eCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCccc
Confidence 99999999999865544433333 4468999999999999999999999999999999999999999999876532
Q ss_pred -----CCCCCCcCCCCccCccccCCCcccccCChhhHHHhhhcCCCCcceeeeecCCCcc--cCCCCCCCCCCCCCCceE
Q 040462 562 -----VNDAEVAFGSGHVNPVKAVNPGLIYETSKQDYIKILCSIGYNESIVRSISGDNST--CPKGSNKLSAKDLNYPSM 634 (726)
Q Consensus 562 -----~~~~~~~~G~G~vn~~~A~~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~~ln~ps~ 634 (726)
.++.+++||+|+|||.+|++||||||++.+||++|||++||+.++|+.|++.+++ |+. ...|||||||
T Consensus 471 ~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~-----~~~~lNyPs~ 545 (649)
T 3i6s_A 471 DSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN-----PSADLNYPSF 545 (649)
T ss_dssp ETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC-----CCCCCCCSSE
T ss_pred ccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC-----chhhcCCCcE
Confidence 2457899999999999999999999999999999999999999999999998878 975 2679999999
Q ss_pred EEee-cCCCCce--EEEEEEEEeccCCCeeEEEEEEeecceeEEEEec---------ceeeEEEEEEeccCCCCCCeEEE
Q 040462 635 AAQV-SRAKPFT--VNFPRIVTNVGLANSTYRAKFFQKFTIISVKVVP---------EKKPFVVTVTGKGLPESGTVVPA 702 (726)
Q Consensus 635 ~~~~-~~~~~~~--~~~~rtvtnvg~~~~ty~~~v~~~p~g~~v~v~p---------~~~~~~vt~~~~~~~~~~~~~~G 702 (726)
++++ +.+.... ++|+|||||||+..++|+++|++ |+|++|+|+| |+++|+|||+.+.. ..+.|+||
T Consensus 546 ~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~-p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~-~~~~~~fg 623 (649)
T 3i6s_A 546 IALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKA-PKNSTISVSPQILVFKNKNEKQSYTLTIRYIGD-EGQSRNVG 623 (649)
T ss_dssp EEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEEC-CTTEEEEEESSEEEECC-CCEEEEEEEEEECCC----CCCEE
T ss_pred EeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEec-CCCCEEEEECCEEEEecCCCEEEEEEEEEeccc-CCCceEEE
Confidence 9998 4431112 89999999999989999999999 9999999999 99999999998754 45679999
Q ss_pred EEEEEc--CCeEEEeeEEEEee
Q 040462 703 TLVWSD--GIHSVRSPIVVHTQ 722 (726)
Q Consensus 703 ~~~~~~--~~~~vr~p~~~~~~ 722 (726)
+|+|+| |+|.|||||+|++.
T Consensus 624 ~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 624 SITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEcCCCCeEEEEeEEEEEc
Confidence 999998 99999999999875
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=1.3e-119 Score=1047.04 Aligned_cols=599 Identities=51% Similarity=0.868 Sum_probs=516.8
Q ss_pred cCCCccccccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecC-----
Q 040462 112 TTRSWDFMGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYT----- 186 (726)
Q Consensus 112 ~~~s~~~~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~----- 186 (726)
|+++|+|+|+++.+|.+..+|+||+|||||||||++||+|.|+++++++.+|+|.|+.+.+|.||+|+||+++|.
T Consensus 1 tt~s~~flGl~~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~~~ 80 (621)
T 3vta_A 1 TTRSWDFLGFPLTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGRPI 80 (621)
T ss_dssp CCSHHHHTTCCTTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSSSC
T ss_pred CCCChhHcCCCccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCCcc
Confidence 689999999997889999999999999999999999999999999999999999999999999999999999984
Q ss_pred ---CCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCCCHHHHHHHHHHHHhCCCeEE
Q 040462 187 ---TDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGCASTDILAAFDDAIADGVDII 263 (726)
Q Consensus 187 ---~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~gvdVI 263 (726)
+..+++|.+||||||||||||+.+.+.+.+|++.|.++||||+|+|++||+|++.||..+++++||++|+++|+|||
T Consensus 81 ~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~~g~dVi 160 (621)
T 3vta_A 81 SPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVDII 160 (621)
T ss_dssp CTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHHHTCSEE
T ss_pred CCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 24568899999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeCCCceEeeee
Q 040462 264 TVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYS 343 (726)
Q Consensus 264 n~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~ 343 (726)
|||||+..+..++.+++++++++|.++||+||+||||+|+...++++.+||+++|++++.+|.|...+.++++..+.+.+
T Consensus 161 n~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~~s 240 (621)
T 3vta_A 161 SLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQGVS 240 (621)
T ss_dssp EECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEEBC
T ss_pred EecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeeeee
Confidence 99999886667788999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred eccCCCCCceeeEEecCCCCCCC-CcCCCCCCCCCCCCCCCccceEEEEEe--cchhHHHHhcCceEEEEEecCCCCcee
Q 040462 344 INSFAMKGKKFPLVHGKEVSESC-PEFSSQACNPGCINSSLVKGKIVMCSK--FDGYTEVHKVGAAGSILFNDQYEKVSF 420 (726)
Q Consensus 344 ~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~c~~~~~~~~~~~gkiv~~~~--~~~~~~~~~~Ga~g~i~~~~~~~~~~~ 420 (726)
+... ....+++++..+..... .......|.+..+++.+++|||++|++ ..+.......|+.++|+.++... ...
T Consensus 241 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~~~~~~~~~~Ga~gvi~~~~~~~-~~~ 317 (621)
T 3vta_A 241 INTF--DNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFGPHEFFKSLDGAAGVLMTSNTRD-YAD 317 (621)
T ss_dssp CCCS--CCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCCCHHHHHHHHTTCSEEEEECSCCS-SCC
T ss_pred cccC--CCcccccccccccccccccccccccccccccccccccceEEEEecCCChhHHhhhhcceeEEEEEecCCC-ccc
Confidence 7643 35667888877665433 345567899999999999999999988 55667778889999998887543 345
Q ss_pred eeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCC
Q 040462 421 VVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLA 500 (726)
Q Consensus 421 ~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~ 500 (726)
.+.+|...++..++..++.|+..+..+.+++...+......++.++.||||||+...+++|||||+|||++|+++|+...
T Consensus 318 ~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~ 397 (621)
T 3vta_A 318 SYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVA 397 (621)
T ss_dssp CCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECSSEEEECCSSS
T ss_pred ccccceEEECHHHHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccccccCCcceEeecCccc
Confidence 58899999999999999999999999999996556666678899999999999988899999999999999999998654
Q ss_pred CCCCCCCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccC
Q 040462 501 PISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAV 580 (726)
Q Consensus 501 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~ 580 (726)
.... ..+...|..+||||||||||||++|||||+||+|||++||++||+||+++.....+..+++||+|+|||.+|+
T Consensus 398 ~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~~~~~~~~~GaG~v~~~~A~ 474 (621)
T 3vta_A 398 PVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARFNPQAEFAYGSGHVNPLKAV 474 (621)
T ss_dssp CBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTTCTTTHHHHTTCBCCHHHHS
T ss_pred cccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccCCCCCchhcCCCccCHHHhc
Confidence 3322 2344689999999999999999999999999999999999999999999988777889999999999999999
Q ss_pred CCcccccCChhhHHHhhhcCCCCcceeeeecCCCcccCCCCCCCCCCCCCCceEEEeecCCCCceEEEEEEEEeccCCCe
Q 040462 581 NPGLIYETSKQDYIKILCSIGYNESIVRSISGDNSTCPKGSNKLSAKDLNYPSMAAQVSRAKPFTVNFPRIVTNVGLANS 660 (726)
Q Consensus 581 ~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~rtvtnvg~~~~ 660 (726)
+||||||++.+||+.|||++||+..+++.++++...|+.. ......|||||||++........+++|+|||||||+..+
T Consensus 475 ~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ 553 (621)
T 3vta_A 475 RPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSG-NTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQAS 553 (621)
T ss_dssp CCSEECCCCGGGCC------------------------------CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCE
T ss_pred CCCeEeecccchhhhhhcccCCCchhheeeeccccccCCC-CcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCe
Confidence 9999999999999999999999999999999998899775 455578999999999865544568999999999999999
Q ss_pred eEEEEEEeecceeEEEEec---------ceeeEEEEEEeccCCCCCCeEEEEEEEEcCCeEEEeeEEEEe
Q 040462 661 TYRAKFFQKFTIISVKVVP---------EKKPFVVTVTGKGLPESGTVVPATLVWSDGIHSVRSPIVVHT 721 (726)
Q Consensus 661 ty~~~v~~~p~g~~v~v~p---------~~~~~~vt~~~~~~~~~~~~~~G~~~~~~~~~~vr~p~~~~~ 721 (726)
||+++|++ |+|++|+|+| |+++|+|||+.. ..+.|+||+|+|+||+|.||+||+|+.
T Consensus 554 ty~~~v~~-p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~---~~~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 554 TYRAMISA-PQGLTISVNPNVLSFNGLGDRKSFTLTVRGS---IKGFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp EEEEEEEC-CSSEEEEEESSEEEECSTTCEEEEEEEEEEC---CCSSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred EEEEEEEC-CCCcEEEEecCEEEEcCCCcEEEEEEEEEec---CCCceEEEEEEEEcCCEEEEeCEEEEE
Confidence 99999999 9999999999 899999999875 457899999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=4.2e-82 Score=761.42 Aligned_cols=520 Identities=22% Similarity=0.272 Sum_probs=413.4
Q ss_pred cccccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCc-------------ccCCceeeeee
Q 040462 117 DFMGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKN-------------FTCNNKLIGAR 183 (726)
Q Consensus 117 ~~~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~-------------f~~n~klig~~ 183 (726)
++++++ .+|+++.+|+||+|||||||||++||+|.+. ..|++.|..+.+ ..||+|+++++
T Consensus 2 d~i~~~-~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~ 74 (926)
T 1xf1_A 2 DPSQVK-TLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYH 74 (926)
T ss_dssp CTTCCH-HHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEE
T ss_pred CccccH-HHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceee
Confidence 467888 8999999999999999999999999999853 467666654322 27999999999
Q ss_pred ecCCCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC--CCHHHHHHHHHHHHhCCCe
Q 040462 184 YYTTDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG--CASTDILAAFDDAIADGVD 261 (726)
Q Consensus 184 ~~~~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~A~~~gvd 261 (726)
+|.+.....|..||||||||||||+.+.+.+. .+.+.||||+|+|++||+|+..+ +..+++++||++|+++|+|
T Consensus 75 ~~~~~~~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~~gvd 150 (926)
T 1xf1_A 75 DYSKDGKTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAINLGAK 150 (926)
T ss_dssp ESCCCSCCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCE
T ss_pred ccccCCCCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHHhCCc
Confidence 99654444599999999999999987654332 24569999999999999999876 5678999999999999999
Q ss_pred EEEeccCCCCC-CCccccHHHHHHHHHHhCCcEEEEecCCCCCCC-------------Ccc--ccCCCceEEEeeeccCc
Q 040462 262 IITVSLGGNIP-VDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNL-------------GFV--YSVAPWLMSVAASTTDR 325 (726)
Q Consensus 262 VIn~S~G~~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-------------~~~--~~~~p~vitVgA~~~~~ 325 (726)
|||||||.... ...+.++++.++++|.++||+||+||||+|+.. .++ ++.+||+|+|||++.++
T Consensus 151 VIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~ 230 (926)
T 1xf1_A 151 VINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDK 230 (926)
T ss_dssp EEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSE
T ss_pred EEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEecccccc
Confidence 99999998632 345677889999999999999999999999632 222 34589999999999999
Q ss_pred ceeeEEEe-CCCceEeeeeeccC--CCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEe-----cchh
Q 040462 326 LFVDKVLL-GNGATLSGYSINSF--AMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSK-----FDGY 397 (726)
Q Consensus 326 ~~~~~~~~-g~g~~~~g~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~-----~~~~ 397 (726)
.+...+.+ +++....+.++... ...+..+++++.+. .|.+..+ .+++||||+|+| .+|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-----------g~~~~~~--~~v~Gkivl~~rg~~~~~~k~ 297 (926)
T 1xf1_A 231 QLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-----------GTKEDDF--KDVKGKIALIERGDIDFKDKI 297 (926)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-----------SCSTTTT--TTCTTSEEEEECCSSCHHHHH
T ss_pred ccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-----------CCCccch--hhcCCeEEEEECCCCCHHHHH
Confidence 99998888 66655555554321 12367799998643 3766665 689999999998 5788
Q ss_pred HHHHhcCceEEEEEecCCCCc----eeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEE-eeeeeecCCCCCcccccCCCC
Q 040462 398 TEVHKVGAAGSILFNDQYEKV----SFVVSLPAVAVSMENFNSLISYKNSTKKPEAEI-LKTEAIKDFDAPVVAPFSSRG 472 (726)
Q Consensus 398 ~~~~~~Ga~g~i~~~~~~~~~----~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i-~~~~~~~~~~~~~~a~fSs~G 472 (726)
.+++++|+.|+|++++..... .....+|+..|+.+++.+|.+ ....++++ .....+.....+.++.|||||
T Consensus 298 ~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~~~~a~FSSrG 373 (926)
T 1xf1_A 298 AKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASGTKLSRFSSWG 373 (926)
T ss_dssp HHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSCSBCCTTSCCC
T ss_pred HHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCcceeccccCCC
Confidence 899999999999999875432 223679999999999998874 34444444 222345666788999999999
Q ss_pred CCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceeecccccchhHHHHHHHHHHH----hhCCCCCHHH---
Q 040462 473 PNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVK----SFHPDWSPSA--- 545 (726)
Q Consensus 473 P~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----~~~P~~sp~~--- 545 (726)
|+. ++++||||+|||++|+++++.+ .|..+||||||||||||++|||+ +.||+|+|+|
T Consensus 374 p~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~ 438 (926)
T 1xf1_A 374 LTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLD 438 (926)
T ss_dssp BCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHH
T ss_pred CCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHH
Confidence 996 8999999999999999999754 79999999999999999999995 5699999997
Q ss_pred -HHHHHHhccccCCCCC--CCCCCCcCCCCccCccccCCCcccccCChhhHHHhhhcCCCCcceeeeecCCCcccCCCCC
Q 040462 546 -IRSAIMTTAWPMNSSK--VNDAEVAFGSGHVNPVKAVNPGLIYETSKQDYIKILCSIGYNESIVRSISGDNSTCPKGSN 622 (726)
Q Consensus 546 -Ik~~L~~TA~~i~~~~--~~~~~~~~G~G~vn~~~A~~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~ 622 (726)
||++||+||+++.... ...++++||+|+||+.+|++|.+ |||..+++..
T Consensus 439 ~Iks~L~~TA~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~----------------- 490 (926)
T 1xf1_A 439 LAKKVLMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS----------------- 490 (926)
T ss_dssp HHHHHHHHHSBCCEEGGGTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS-----------------
T ss_pred HHHHHHHhcCCCcccCCCCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc-----------------
Confidence 9999999999875531 23467899999999999999854 7887765332
Q ss_pred CCCCCCCCCceEEEeecCCCCceEEEEEEEEeccCC--CeeEEEEEEee-cceeEEEEec----------------ceee
Q 040462 623 KLSAKDLNYPSMAAQVSRAKPFTVNFPRIVTNVGLA--NSTYRAKFFQK-FTIISVKVVP----------------EKKP 683 (726)
Q Consensus 623 ~~~~~~ln~ps~~~~~~~~~~~~~~~~rtvtnvg~~--~~ty~~~v~~~-p~g~~v~v~p----------------~~~~ 683 (726)
+|.+..+. .+.+++|||||+|+. ..+|++++... |+|..++|.| |+++
T Consensus 491 ----------~i~l~~~~---~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vtv~ag~~~~ 557 (926)
T 1xf1_A 491 ----------KVHLNNVS---DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKITIPANSSKQ 557 (926)
T ss_dssp ----------CEEEEEEC---SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEEECTTEEEE
T ss_pred ----------eeeccccC---ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEEECCCCEEE
Confidence 23333333 278899999999985 46788887642 5566666655 8899
Q ss_pred EEEEEEecc--------CCCCCCeEEEEEEEE--cCCeE-EEeeEEEEe
Q 040462 684 FVVTVTGKG--------LPESGTVVPATLVWS--DGIHS-VRSPIVVHT 721 (726)
Q Consensus 684 ~~vt~~~~~--------~~~~~~~~~G~~~~~--~~~~~-vr~p~~~~~ 721 (726)
|+|||+... . +.+.|+||+|+|+ |++|. ||+||+++.
T Consensus 558 ~~vt~~~~~~~~~~~~~~-~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 558 VTVPIDASRFSKDLLAQM-KNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEEEEECHHHHHHHHHHS-TTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred EEEEEEcCccchhhcccc-cCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 999998751 1 3457899999999 67775 999999985
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=2.6e-61 Score=548.61 Aligned_cols=363 Identities=29% Similarity=0.413 Sum_probs=292.1
Q ss_pred CCCcEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCHHHHHHH-----------HcCCC
Q 040462 30 DDRKVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTDLERQKL-----------ASMEE 98 (726)
Q Consensus 30 ~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L-----------~~~p~ 98 (726)
..+..|||.|++... ......+++.+ +.+++++|+ .|+||+++++++++++| +++|+
T Consensus 33 ~~~~~~iV~~~~~~~-----~~~~~~~~~~~------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 100 (539)
T 3afg_A 33 DQEVSTIIMFDNQAD-----KEKAVEILDFL------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSG 100 (539)
T ss_dssp TCEEEEEEEESSHHH-----HHHHHHHHHHH------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTT
T ss_pred cCceEEEEEECCCCC-----HHHHHHHHHhc------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCC
Confidence 345679999987532 11222233333 257899995 79999999999999999 88999
Q ss_pred eEEEEeCceeccccC-----CCccccccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcc
Q 040462 99 VVSVFPSRTLQFHTT-----RSWDFMGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNF 173 (726)
Q Consensus 99 V~~v~~~~~~~~~~~-----~s~~~~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f 173 (726)
|++|+++..+++... ..+..++++ .+|..+.+|+||+|||||||||++||+|.++
T Consensus 101 V~~v~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~G~gv~VaViDtGid~~Hpdl~~~------------------- 160 (539)
T 3afg_A 101 VQFIQEDYVVKVAVETEGLDESAAQVMAT-NMWNLGYDGSGITIGIIDTGIDASHPDLQGK------------------- 160 (539)
T ss_dssp EEEEEECCEEECC-----------CCBCS-CCBCCSCCCTTCEEEEEESBCCTTSGGGTTT-------------------
T ss_pred eeEEEecccccccCccccCCccccccCcH-hHHhcCCCCCCcEEEEEecCCCCCChHHhCC-------------------
Confidence 999999999887532 223445666 8999999999999999999999999999753
Q ss_pred cCCceeeeeeecC-CCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHH
Q 040462 174 TCNNKLIGARYYT-TDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAA 251 (726)
Q Consensus 174 ~~n~klig~~~~~-~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~a 251 (726)
+++.++|. +...+.|..||||||||||+|+... ..|.+.||||+|+|+.+|+++..| ++.+++++|
T Consensus 161 -----i~~~~d~~~~~~~~~D~~gHGThVAgiiag~~~~-------~~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~a 228 (539)
T 3afg_A 161 -----VIGWVDFVNGKTTPYDDNGHGTHVASIAAGTGAA-------SNGKYKGMAPGAKLVGIKVLNGQGSGSISDIING 228 (539)
T ss_dssp -----EEEEEETTTCCSSCCBSSSHHHHHHHHHHCCCGG-------GTTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHH
T ss_pred -----EeeeEECCCCCCCCCCCCCCHHHHHHHHhCcCcc-------CCCCEEEECCCCEEEEEEeecCCCCcCHHHHHHH
Confidence 33444442 3456789999999999999997421 134458999999999999999877 788999999
Q ss_pred HHHHHhC----CCeEEEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCC--ccccCCCceEEEeeeccCc
Q 040462 252 FDDAIAD----GVDIITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLG--FVYSVAPWLMSVAASTTDR 325 (726)
Q Consensus 252 i~~A~~~----gvdVIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~p~vitVgA~~~~~ 325 (726)
|+||+++ |++|||||||.. ......+.+..++++|.++|++||+||||+|+... ..++..+++|+|||++.+
T Consensus 229 i~~a~~~~~~~g~~Vin~SlG~~-~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~- 306 (539)
T 3afg_A 229 VDWAVQNKDKYGIKVINLSLGSS-QSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY- 306 (539)
T ss_dssp HHHHHHTHHHHTEEEEEECCCCC-SCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT-
T ss_pred HHHHHhhhhhcCCcEEEeCCCCC-CCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecCC-
Confidence 9999986 999999999987 33445688899999999999999999999998654 356788999999997533
Q ss_pred ceeeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCc
Q 040462 326 LFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGA 405 (726)
Q Consensus 326 ~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga 405 (726)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCce
Q 040462 406 AGSILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDI 485 (726)
Q Consensus 406 ~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI 485 (726)
+.++.||||||+. ++++||||
T Consensus 307 ---------------------------------------------------------~~~a~fSs~Gp~~--~~~~kpdi 327 (539)
T 3afg_A 307 ---------------------------------------------------------DVITDFSSRGPTA--DNRLKPEV 327 (539)
T ss_dssp ---------------------------------------------------------SCBCSSSCCCCCT--TCBCCCSE
T ss_pred ---------------------------------------------------------cccccccCCCCCC--CCCCcccE
Confidence 4578999999997 89999999
Q ss_pred EeCCccEEeecCCCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCCC
Q 040462 486 SAPGVDILAAVSPLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVNDA 565 (726)
Q Consensus 486 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~ 565 (726)
+|||++|+++++..... .+.....|..++|||||||||||++|||+|+||+|+|++||++|++||+++... ...
T Consensus 328 ~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~--~~~ 401 (539)
T 3afg_A 328 VAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPD--EIA 401 (539)
T ss_dssp EEECSSEEEECCTTCCC----SEECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGG--GCS
T ss_pred ecCcCCEEeeccCCCCC----CCCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCC--CCC
Confidence 99999999998754211 111123699999999999999999999999999999999999999999987632 125
Q ss_pred CCcCCCCccCccccCCCc
Q 040462 566 EVAFGSGHVNPVKAVNPG 583 (726)
Q Consensus 566 ~~~~G~G~vn~~~A~~~g 583 (726)
++.||+|+||+.+|++..
T Consensus 402 ~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 402 DIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp BTTTBTCBCCHHHHHTGG
T ss_pred ccCccCCccCHHHHhhhc
Confidence 678999999999999853
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=3.4e-58 Score=506.50 Aligned_cols=339 Identities=24% Similarity=0.320 Sum_probs=275.6
Q ss_pred CcEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCHHHHHHHHcCCCeEEEEeCceeccc
Q 040462 32 RKVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTDLERQKLASMEEVVSVFPSRTLQFH 111 (726)
Q Consensus 32 ~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~~~ 111 (726)
+.+|||.|++... .+.+++.. +.++++.|. .+++|+++++++++++|+++|+|++|+++..++++
T Consensus 2 ~~~~iV~~~~~~~--------~~~~~~~~------g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~ 66 (395)
T 2z2z_A 2 TIRVIVSVDKAKF--------NPHEVLGI------GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLL 66 (395)
T ss_dssp EEEEEEEECTTTC--------CHHHHHHT------TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEEC
T ss_pred cEEEEEEECCCcc--------HHHHHHHc------CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeeccc
Confidence 4689999998643 11233332 468999996 59999999999999999999999999999988764
Q ss_pred cC--------------CCccc--cccchhhccCCCCCCC--cEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcc
Q 040462 112 TT--------------RSWDF--MGLNQSITRKHSVESN--IIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNF 173 (726)
Q Consensus 112 ~~--------------~s~~~--~g~~~~~w~~~~~G~g--V~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f 173 (726)
.. .+|.+ ++.+ .+|+.+ +|+| |+|||||||||++||+|.++ ...+.+|
T Consensus 67 ~~~~~~~~~~~~~~~~~~w~~~~i~~~-~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~------------~~~~~~~ 132 (395)
T 2z2z_A 67 GKPSWLGGGSTQPAQTIPWGIERVKAP-SVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------IAWCVST 132 (395)
T ss_dssp CEECC------CCSCCCCHHHHHTTCG-GGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG------------EEEEEEC
T ss_pred CCCCcccccccCccccCCcchhhcCHH-HHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc------------cccCccc
Confidence 32 23433 4455 799987 9999 99999999999999999864 1122222
Q ss_pred cCCceeeeeeecCCCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHH
Q 040462 174 TCNNKLIGARYYTTDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAF 252 (726)
Q Consensus 174 ~~n~klig~~~~~~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai 252 (726)
..+. + + ....++.|..||||||||||+|.. + ..| +.||||+|+|+.+|+++..| ++.+++++||
T Consensus 133 ~~~~-~-~----~~~~~~~d~~gHGT~vAgiia~~~-n---~~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai 197 (395)
T 2z2z_A 133 LRGK-V-S----TKLRDCADQNGHGTHVIGTIAALN-N---DIG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGI 197 (395)
T ss_dssp GGGC-C-B----CCHHHHBCSSSHHHHHHHHHHCCC-S---SSS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHH
T ss_pred cCCc-c-c----CCCCCCCCCCCCHHHHHHHHHeec-C---CCc-----eEEECCCCEEEEEEEecCCCCccHHHHHHHH
Confidence 1110 0 0 001125688999999999999973 1 112 38999999999999998877 7889999999
Q ss_pred HHHHhC--------------------CCeEEEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCC
Q 040462 253 DDAIAD--------------------GVDIITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVA 312 (726)
Q Consensus 253 ~~A~~~--------------------gvdVIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~ 312 (726)
+||+++ +++|||||||.... ...+..++.+|.++|++||+||||+|.....+++..
T Consensus 198 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~ 273 (395)
T 2z2z_A 198 EQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD----DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAY 273 (395)
T ss_dssp HHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC----CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTS
T ss_pred HHHHhCccccccccccccccccccCCCCeEEEecCCCCCC----CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCC
Confidence 999998 99999999998732 356677777899999999999999998877888999
Q ss_pred CceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEE
Q 040462 313 PWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCS 392 (726)
Q Consensus 313 p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~ 392 (726)
|++|+|||++.+
T Consensus 274 ~~vi~Vga~~~~-------------------------------------------------------------------- 285 (395)
T 2z2z_A 274 PEVIAVGAIDSN-------------------------------------------------------------------- 285 (395)
T ss_dssp TTEEEEEEECTT--------------------------------------------------------------------
T ss_pred CCEEEEEEecCC--------------------------------------------------------------------
Confidence 999999997643
Q ss_pred ecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCC
Q 040462 393 KFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRG 472 (726)
Q Consensus 393 ~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~G 472 (726)
+.++.||++|
T Consensus 286 ----------------------------------------------------------------------~~~a~fS~~G 295 (395)
T 2z2z_A 286 ----------------------------------------------------------------------DNIASFSNRQ 295 (395)
T ss_dssp ----------------------------------------------------------------------SCBCTTSCSS
T ss_pred ----------------------------------------------------------------------CCCCcccCCC
Confidence 4678999999
Q ss_pred CCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhhCC-------------
Q 040462 473 PNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHP------------- 539 (726)
Q Consensus 473 P~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P------------- 539 (726)
| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++|
T Consensus 296 ~----------~v~APG~~i~s~~~~~-------------~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~ 352 (395)
T 2z2z_A 296 P----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFD 352 (395)
T ss_dssp C----------SEEEECSSEEEEETTT-------------EEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTT
T ss_pred C----------CEEeCCCCeeeecCCC-------------ceEecCCHHHHHHHHHHHHHHHHHhCcccccccccccccc
Confidence 7 6799999999998764 799999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCCC
Q 040462 540 DWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVNP 582 (726)
Q Consensus 540 ~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~~ 582 (726)
.|++.+||++|++||+++... ..+..||+|+||+.+|++.
T Consensus 353 ~ls~~~v~~~L~~tA~~~~~~---g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 353 DISKNTVRGILHITADDLGPT---GWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp CCSSSSHHHHHHHHSBCCSSS---SSBTTTBTCBCCHHHHHHH
T ss_pred CCCHHHHHHHHHhhccccCCC---CCCCCccCceeCHHHHHHH
Confidence 999999999999999988642 3568899999999999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=1.1e-56 Score=506.73 Aligned_cols=352 Identities=20% Similarity=0.285 Sum_probs=278.2
Q ss_pred CCcEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCHHHHHHHHc-CCCeEEEEeCceec
Q 040462 31 DRKVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTDLERQKLAS-MEEVVSVFPSRTLQ 109 (726)
Q Consensus 31 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~-~p~V~~v~~~~~~~ 109 (726)
.++.|||++++.. ....+++.. +.++++.| ..+++|+++++++++++|++ +|+|++|+++..++
T Consensus 43 ~~~~yiv~~~~~~--------~~~~~~~~~------g~~v~~~~-~~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~ 107 (471)
T 3t41_A 43 EELYYSVEYKNTA--------TFNKLVKKK------SLNVVYNI-PELHVAQIKMTKMHANALANYKNDIKYINATCSTC 107 (471)
T ss_dssp CCEEEEEEESCHH--------HHHHHHHHH------TCEEEEEE-GGGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSC
T ss_pred CceEEEEEcCCHH--------HHHHHHHhC------CCEEEEec-CCccEEEEEeCHHHHHHHHhcCCCCcEEEecceec
Confidence 3568899766532 122222322 35788888 55999999999999999999 99999999998877
Q ss_pred cccC-------------CCccccccch--hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCccc
Q 040462 110 FHTT-------------RSWDFMGLNQ--SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFT 174 (726)
Q Consensus 110 ~~~~-------------~s~~~~g~~~--~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~ 174 (726)
+... .+|.+..+.. .+|+.+.+|+||+|||||||||++||+|.++- |.+. .+|.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~~G~gv~VaViDtGid~~Hp~~~~~~-------~~~~----~~~~ 176 (471)
T 3t41_A 108 ITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLPKHANTKIAIIDTGVMKNHDDLKNNF-------STDS----KNLV 176 (471)
T ss_dssp BCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCCSSCCCCEEEEESCCCTTCTTTTTTB-------CTTC----EECC
T ss_pred cccccccccCCCCccccccccHhhccCcHHHHhccCCCCCcEEEEEeCCCCCCChhHhcCc-------ccCC----cccc
Confidence 6533 2466655543 58999999999999999999999999998751 1110 1111
Q ss_pred CCceeeeeeec--CCCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCCCHHHHHHHH
Q 040462 175 CNNKLIGARYY--TTDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGCASTDILAAF 252 (726)
Q Consensus 175 ~n~klig~~~~--~~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai 252 (726)
.++.+.+.... .+...+.|..||||||||||+|+. ...||||+|+|+.+|+++..++..+++++||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai 244 (471)
T 3t41_A 177 PLNGFRGTEPEETGDVHDVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGSKKTELLWVSKAI 244 (471)
T ss_dssp CTTCGGGCCTTCCCCTTCCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSSSCCCHHHHHHHH
T ss_pred cCCCccCCCcccCCCCCCCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccCCCCcHHHHHHHH
Confidence 11111110000 012357789999999999999862 1489999999999999988668999999999
Q ss_pred HHHHhCCCeEEEeccCCCCCC------------CccccHHHHHHHHHHhCCcEEEEecCCCCCCCC--------------
Q 040462 253 DDAIADGVDIITVSLGGNIPV------------DFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLG-------------- 306 (726)
Q Consensus 253 ~~A~~~gvdVIn~S~G~~~~~------------~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-------------- 306 (726)
+||+++|++|||||||..... ....+.+..++..+.++|++||+||||+|.+..
T Consensus 245 ~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~ 324 (471)
T 3t41_A 245 VQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGN 324 (471)
T ss_dssp HHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSS
T ss_pred HHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccC
Confidence 999999999999999973111 123467888888999999999999999998654
Q ss_pred ----ccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCC
Q 040462 307 ----FVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSS 382 (726)
Q Consensus 307 ----~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~ 382 (726)
..++.+|++|+|||++.+
T Consensus 325 ~~~~~~Pa~~~~vitVgA~~~~---------------------------------------------------------- 346 (471)
T 3t41_A 325 GEVKDVPASMDNVVTVGSTDQK---------------------------------------------------------- 346 (471)
T ss_dssp SEEEEETTTSTTEEEEEEECTT----------------------------------------------------------
T ss_pred CceeeccccCCCeEEEEeeCCC----------------------------------------------------------
Confidence 266788999999998644
Q ss_pred CccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCC
Q 040462 383 LVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDA 462 (726)
Q Consensus 383 ~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 462 (726)
T Consensus 347 -------------------------------------------------------------------------------- 346 (471)
T 3t41_A 347 -------------------------------------------------------------------------------- 346 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCCCCCCCCCCCcCCceEeCCcc----------------------EEeecCCCCCCCCCCCCccccceeecccc
Q 040462 463 PVVAPFSSRGPNAILPDILKPDISAPGVD----------------------ILAAVSPLAPISTDPEDKRRVKYSIESGT 520 (726)
Q Consensus 463 ~~~a~fSs~GP~~~~~~~lKPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGT 520 (726)
+.++.||++||+. |||+|||++ |+++++.+ .|..++||
T Consensus 347 ~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~-------------~~~~~sGT 406 (471)
T 3t41_A 347 SNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG-------------RYIYQAGT 406 (471)
T ss_dssp SSBCTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-------------SEEEECSH
T ss_pred CCCCCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC-------------CEEeecch
Confidence 4578999999973 599999987 88888654 79999999
Q ss_pred cchhHHHHHHHHHHHhhCC-CCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCCC
Q 040462 521 SMACPHAAAVAAYVKSFHP-DWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVNP 582 (726)
Q Consensus 521 SmAaP~VAG~aALl~~~~P-~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~~ 582 (726)
|||||||||++|||+|++| .|+|++||++|++||++... .++..||||+||+.+|++.
T Consensus 407 S~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~----~~~~~~G~G~vd~~~Al~~ 465 (471)
T 3t41_A 407 ALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN----KPFSRYGHGELDVYKALNV 465 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC----CCHHHHTTCBBCHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC----CCcCccccChhCHHHHHHH
Confidence 9999999999999999999 89999999999999998755 3678899999999999984
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1.1e-57 Score=521.36 Aligned_cols=334 Identities=17% Similarity=0.224 Sum_probs=59.6
Q ss_pred CcEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCHHHHHHHHcCCCeEEEEeCceeccc
Q 040462 32 RKVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTDLERQKLASMEEVVSVFPSRTLQFH 111 (726)
Q Consensus 32 ~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~~~ 111 (726)
+++|||+|++... ......+.+++.+.+.. .....++++.|++.|+||+++++++++++|+++|+|++|+|+..+...
T Consensus 75 pg~YIV~lk~~~~-~~~~~~~~~~l~a~~~~-~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~ 152 (692)
T 2p4e_P 75 PGTYVVVLKEETH-LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQ 152 (692)
T ss_dssp EEEEEEEECTTCC-HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC
T ss_pred CCcEEEEECCCCC-HHHHHHHHHHHHHHHhh-cccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccC
Confidence 3489999998765 23333444555443322 223468999999999999999999999999999999999999988653
Q ss_pred cCCCccccccch-----hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecC
Q 040462 112 TTRSWDFMGLNQ-----SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYT 186 (726)
Q Consensus 112 ~~~s~~~~g~~~-----~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~ 186 (726)
..+|.+..+.. ..|..+.+|+||+|+|||||||++||+|.++.. |. +.++..+. -+ ..|
T Consensus 153 -~~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-----~~~~~~d~--dg-~~~- 216 (692)
T 2p4e_P 153 -SIPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-----DFENVPEE--DG-TRF- 216 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -CCCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-----ccccccCC--CC-Ccc-
Confidence 34677655432 368778899999999999999999999987521 11 11110000 00 001
Q ss_pred CCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhC------C
Q 040462 187 TDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIAD------G 259 (726)
Q Consensus 187 ~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~------g 259 (726)
...+.|.+||||||||||+|+. .||||+|+|+++|++++.| ++.+++++||+|++++ |
T Consensus 217 -~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g 281 (692)
T 2p4e_P 217 -HRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVG 281 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -cCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCC
Confidence 1356789999999999999873 7999999999999998877 7889999999999986 8
Q ss_pred CeEEEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCc-cccCCCceEEEeeeccCcceeeEEEeCCCce
Q 040462 260 VDIITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGF-VYSVAPWLMSVAASTTDRLFVDKVLLGNGAT 338 (726)
Q Consensus 260 vdVIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~ 338 (726)
++|||||||+. . ...+..++..|.++||+||+||||+|.+... .++..|++|+|||++.++..
T Consensus 282 ~~VINmSlGg~-~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~----------- 345 (692)
T 2p4e_P 282 PLVVLLPLAGG-Y----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP----------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEecCCCC-C----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc-----------
Confidence 99999999975 2 3455666678899999999999999987644 47789999999998655210
Q ss_pred EeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCc
Q 040462 339 LSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKV 418 (726)
Q Consensus 339 ~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~ 418 (726)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCC
Q 040462 419 SFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSP 498 (726)
Q Consensus 419 ~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~ 498 (726)
...-+.||++|| ||||+|||++|+++++.
T Consensus 346 -------------------------------------------a~~ss~fSn~G~--------~vDI~APG~~I~St~~~ 374 (692)
T 2p4e_P 346 -------------------------------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSD 374 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------------cccccccCCCCC--------ceeEEecCCcEEeeccC
Confidence 001123899998 45999999999999875
Q ss_pred CCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcccc
Q 040462 499 LAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWP 556 (726)
Q Consensus 499 ~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~ 556 (726)
. ...|..++|||||||||||++|||++++|+|+|++||++|++||.+
T Consensus 375 ~-----------~~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~ 421 (692)
T 2p4e_P 375 C-----------STCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAK 421 (692)
T ss_dssp ----------------------------------------------------------
T ss_pred C-----------CCceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccc
Confidence 3 1379999999999999999999999999999999999999999974
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=1.7e-54 Score=498.29 Aligned_cols=370 Identities=24% Similarity=0.272 Sum_probs=278.1
Q ss_pred CCCcEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCH---H-HHHHHH--cCCCeEEEE
Q 040462 30 DDRKVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTD---L-ERQKLA--SMEEVVSVF 103 (726)
Q Consensus 30 ~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~---~-~~~~L~--~~p~V~~v~ 103 (726)
..+++|||.+++... .+.+++.+ +.++.+.+ ..+++++++++. + .+++|+ ++|+|++||
T Consensus 29 ~~~~~~IV~~k~~~~--------~~~~~~~~------g~~v~~~~-~~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~ve 93 (671)
T 1r6v_A 29 YTEGKILVGYNDRSE--------VDKIVKAV------NGKVVLEL-PQIKVVSIKLNGMTVKQAYDKIKALALKGIRYVE 93 (671)
T ss_dssp BCTTEEEEEESSHHH--------HHHHHHHH------TCEEEEEE-GGGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEE
T ss_pred cCCccEEEEECCCcC--------HHHHHHhc------CCeEEEEc-CCCcEEEEEeCCcCHHHHHHHHHhccCCCceEEe
Confidence 358999999997432 22333333 24677777 578999999865 3 356676 489999999
Q ss_pred eCceecccc------------------------------CCCccc--cccchhh-ccCCCCCCCcEEEEEcccCCCCCCC
Q 040462 104 PSRTLQFHT------------------------------TRSWDF--MGLNQSI-TRKHSVESNIIIGVIDSGIWPESES 150 (726)
Q Consensus 104 ~~~~~~~~~------------------------------~~s~~~--~g~~~~~-w~~~~~G~gV~VgVIDtGid~~Hp~ 150 (726)
|+..+++.. ..+|.+ ++++ .+ |+. .+|+||+|||||||||++||+
T Consensus 94 pd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~-~a~w~~-~tG~gV~VAVIDTGVd~~Hpd 171 (671)
T 1r6v_A 94 PSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVT-QQLWEE-ASGTNIIVAVVDTGVDGTHPD 171 (671)
T ss_dssp CCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCC-HHHHHH-CSCTTCEEEEEESCCBTTSGG
T ss_pred cCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCc-hhhhhc-cCCCCCEEEEEeCCCCCCCcc
Confidence 997654321 012322 3444 56 988 899999999999999999999
Q ss_pred CCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCc
Q 040462 151 FSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSA 230 (726)
Q Consensus 151 f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A 230 (726)
|.++ .+ .++++..+..+ ....+..|..||||||||||||... -.| +.||||+|
T Consensus 172 L~~~-------~~-----~g~~~~~~~~~------p~~~d~~d~~gHGThVAGiIAa~~n----g~g-----v~GVAP~A 224 (671)
T 1r6v_A 172 LEGQ-------VI-----AGYRPAFDEEL------PAGTDSSYGGSAGTHVAGTIAAKKD----GKG-----IVGVAPGA 224 (671)
T ss_dssp GTTT-------BC-----CEEEGGGTEEE------CTTCBCCTTCSHHHHHHHHHHCCCS----SSS-----CCCSCTTS
T ss_pred cccc-------EE-----ecccccCCCcC------CCCCCCccCCCcchhhhhhhhccCC----CCc-----eEEECCCC
Confidence 9875 11 12222111111 0122345678999999999999731 112 38999999
Q ss_pred eEEEEEeeCC------CC-CCHHHHHHHHHHHHhCCCeEEEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCC
Q 040462 231 RIAAYKVCNP------SG-CASTDILAAFDDAIADGVDIITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGS 303 (726)
Q Consensus 231 ~l~~~kv~~~------~g-~~~~~i~~ai~~A~~~gvdVIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~ 303 (726)
+|+.+|+++. .+ ...+.+++||+||+++|++|||||||... ....+..++..|.++|+++|+||||+|.
T Consensus 225 ~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~ 300 (671)
T 1r6v_A 225 KIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG----YSYTMKEAFDYAMEHGVVMVVSAGNNTS 300 (671)
T ss_dssp EEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCSCSS
T ss_pred EEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC----CCHHHHHHHHHHHhCCCEEEEeCCCCCC
Confidence 9999999986 23 45677999999999999999999999862 2456778888999999999999999998
Q ss_pred CC-CccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCC
Q 040462 304 NL-GFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSS 382 (726)
Q Consensus 304 ~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~ 382 (726)
+. ..+++..|++|+|||++.+..
T Consensus 301 ~~~~~yPA~~~~VItVgA~d~~g~-------------------------------------------------------- 324 (671)
T 1r6v_A 301 DSHHQYPAGYPGVIQVAALDYYGG-------------------------------------------------------- 324 (671)
T ss_dssp SCCCCBTTTSTTCEEEEEEEEETT--------------------------------------------------------
T ss_pred CCCccCcccCCCeEEEEEEcCCCC--------------------------------------------------------
Confidence 75 567788999999999864420
Q ss_pred CccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCC
Q 040462 383 LVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDA 462 (726)
Q Consensus 383 ~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~ 462 (726)
.
T Consensus 325 -------------------------------------------------------------------------------~ 325 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------T 325 (671)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred CcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCC-----CCCCccccceeecccccchhHHHHHHHHHHHhh
Q 040462 463 PVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPIST-----DPEDKRRVKYSIESGTSMACPHAAAVAAYVKSF 537 (726)
Q Consensus 463 ~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~ 537 (726)
..++.||++||.. ||+|||++|+++++....... .........|..++|||||||||||++|||+|+
T Consensus 326 ~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~ 397 (671)
T 1r6v_A 326 FRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQK 397 (671)
T ss_dssp EEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHH
Confidence 2368899999976 999999999999875421110 000112347999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCCCcccccCChhhH
Q 040462 538 HPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVNPGLIYETSKQDY 593 (726)
Q Consensus 538 ~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~~glv~d~~~~dy 593 (726)
+|+|+|++||++|++||+++... ..+..||+|+||+.+|++..|..+....||
T Consensus 398 ~P~lt~~~Vr~~L~~TA~~~~~~---g~d~~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 398 FPNAKPWQIRKLLENTAFDFNGN---GWDHDTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp CTTCCHHHHHHHHHHHCBCSSSS---SCBTTTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred CCCCCHHHHHHHHHHhCcCCCCC---CCCCCcccceeCHHHHhhhhcCCCCCccce
Confidence 99999999999999999987653 356789999999999999888776655444
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=3.2e-55 Score=489.58 Aligned_cols=380 Identities=24% Similarity=0.322 Sum_probs=274.7
Q ss_pred CCccc--cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCC
Q 040462 114 RSWDF--MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTA 191 (726)
Q Consensus 114 ~s~~~--~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~ 191 (726)
.+|.+ ++.+ .+|+.+ |+||+|+|||||||++||+|.++ .|.+ .++..+. +...+
T Consensus 4 ~~W~l~~i~~~-~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-------~~~~-----~~~~~~~---------~~~~~ 59 (441)
T 1y9z_A 4 TPWGQTFVGAT-VLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-------NVTG-----TNNSGTG---------NWYQP 59 (441)
T ss_dssp CCHHHHHTTCS-SSCCTT--GGGCEEEEEESCCCTTSTTTTTS-------EEEE-----CCCTTSC---------CTTCC
T ss_pred CCCChhhcChh-hhhhcC--CCCcEEEEEcCCCCCCChhHhcC-------cccC-----cccCCCC---------CCCCC
Confidence 35654 4455 789864 77999999999999999999865 2221 2221110 12356
Q ss_pred CCCCCCcchhhhccccCcCCCCccccccCcceeecccCc--eEEEEEeeCCCC-CCHHHHHHHHHHHHhC-CCeEEEecc
Q 040462 192 RDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSA--RIAAYKVCNPSG-CASTDILAAFDDAIAD-GVDIITVSL 267 (726)
Q Consensus 192 ~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A--~l~~~kv~~~~g-~~~~~i~~ai~~A~~~-gvdVIn~S~ 267 (726)
.|..||||||||||++... ..| +.||||+| +|+.+|+++..| ++.+++++||+||+++ |++||||||
T Consensus 60 ~d~~gHGT~vAgiia~~~~--------~~g-~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~ 130 (441)
T 1y9z_A 60 GNNNAHGTHVAGTIAAIAN--------NEG-VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSL 130 (441)
T ss_dssp CSSCCHHHHHHHHHHCCCS--------SSB-CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECC
T ss_pred CCCCCcHHHHHHHHhcccC--------CCC-ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeCC
Confidence 7889999999999999742 122 38999995 999999999877 8888999999999999 999999999
Q ss_pred CCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeCC------------
Q 040462 268 GGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLGN------------ 335 (726)
Q Consensus 268 G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~------------ 335 (726)
|.... ...+..++.+|.++|++||+||||+|.....+++..|++|+|||++.++....+...+.
T Consensus 131 G~~~~----~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i~ 206 (441)
T 1y9z_A 131 GGSGS----TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAIL 206 (441)
T ss_dssp CBSCC----BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSEE
T ss_pred CCCCC----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCee
Confidence 98722 24566777789999999999999999988888899999999999987754332222221
Q ss_pred -------Cc----eEeeeeeccCCC-CC-ceee--EEecCCCCCCCCcCCCCCCCC--CCCCCCCccceEEEEEec----
Q 040462 336 -------GA----TLSGYSINSFAM-KG-KKFP--LVHGKEVSESCPEFSSQACNP--GCINSSLVKGKIVMCSKF---- 394 (726)
Q Consensus 336 -------g~----~~~g~~~~~~~~-~~-~~~~--l~~~~~~~~~~~~~~~~~c~~--~~~~~~~~~gkiv~~~~~---- 394 (726)
+. .+.|.+++.... +. ..++ +.+..+............|.. ..++..+++|||++|+|.
T Consensus 207 s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg~~~~ 286 (441)
T 1y9z_A 207 STVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQG 286 (441)
T ss_dssp EECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECCSCSS
T ss_pred ccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEeccccCc
Confidence 11 122222221100 00 0000 111111000000112235764 356788999999999882
Q ss_pred ------chhHHHHhcCceEEEEEecCCCCc---------eeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecC
Q 040462 395 ------DGYTEVHKVGAAGSILFNDQYEKV---------SFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKD 459 (726)
Q Consensus 395 ------~~~~~~~~~Ga~g~i~~~~~~~~~---------~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~ 459 (726)
+|..+++++|+.|+|++++..... ...+.+|.+.++.++++.|+.|+.++ .
T Consensus 287 ~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~---------- 352 (441)
T 1y9z_A 287 SSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----T---------- 352 (441)
T ss_dssp SSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----E----------
T ss_pred ccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----c----------
Confidence 468899999999999998764321 12267999999999999999876421 0
Q ss_pred CCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhhCC
Q 040462 460 FDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHP 539 (726)
Q Consensus 460 ~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P 539 (726)
.+ +... ...|..++|||||||||||++|||+|+||
T Consensus 353 ------------------------t~--------~~~~-------------~~~y~~~sGTSmAaP~VAG~aALl~~~~p 387 (441)
T 1y9z_A 353 ------------------------TV--------SNQG-------------NQDYEYYNGTSMATPHVSGVATLVWSYHP 387 (441)
T ss_dssp ------------------------EE--------EEEE-------------EESEEEECSHHHHHHHHHHHHHHHHHHCT
T ss_pred ------------------------cc--------cccc-------------CCCceeecccccCCcccchHHHHHHHHCC
Confidence 11 1111 13799999999999999999999999999
Q ss_pred CCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCCCcccccCChhhHHHhhhcCCCC
Q 040462 540 DWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVNPGLIYETSKQDYIKILCSIGYN 603 (726)
Q Consensus 540 ~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~~glv~d~~~~dy~~~lc~~~~~ 603 (726)
+|+|++||++||+||+++...+ .+..||+|+||+.+|+ ||+.|||..++.
T Consensus 388 ~~sp~~ik~~L~~TA~~~~~~g---~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~~ 437 (441)
T 1y9z_A 388 ECSASQVRAALNATADDLSVAG---RDNQTGYGMINAVAAK-----------AYLDESCTGPTD 437 (441)
T ss_dssp TSCHHHHHHHHHHHSBCCSSSS---CBTTTBTCBCCHHHHH-----------HHHHHCTTCC--
T ss_pred CCCHHHHHHHHHhhchhhccCC---CcccccccccCHHHHH-----------HHHHhhhcCCCC
Confidence 9999999999999999886532 4678999999999995 699999998763
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=9.3e-52 Score=434.07 Aligned_cols=266 Identities=29% Similarity=0.366 Sum_probs=216.4
Q ss_pred CCccccccch-hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeec-CCCCCC
Q 040462 114 RSWDFMGLNQ-SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYY-TTDGTA 191 (726)
Q Consensus 114 ~s~~~~g~~~-~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~-~~~~~~ 191 (726)
.+|.+-.+.. .+|+.+..|+||+|+|||||||++||+|.++ ++..++| .+...+
T Consensus 11 ~~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~------------------------~~~~~~~~~~~~~~ 66 (280)
T 1dbi_A 11 YQYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK------------------------VIKGYDFVDNDYDP 66 (280)
T ss_dssp HCCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT------------------------EEEEEETTTTBSCC
T ss_pred CCCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC------------------------cccceeccCCCCCC
Confidence 4565543332 8999988888999999999999999999864 1222233 223456
Q ss_pred CCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhCCCeEEEeccCCC
Q 040462 192 RDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIADGVDIITVSLGGN 270 (726)
Q Consensus 192 ~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~S~G~~ 270 (726)
.|..||||||||||+|...++. | +.||||+|+|+.+|+++..+ ++.+++++||+||+++|++|||||||..
T Consensus 67 ~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~ 138 (280)
T 1dbi_A 67 MDLNNHGTHVAGIAAAETNNAT---G-----IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCD 138 (280)
T ss_dssp CCSSSHHHHHHHHHHCCCSSSS---S-----CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSC
T ss_pred CCCCCcHHHHHHHHhCcCCCCC---c-----ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCC
Confidence 7899999999999999753221 2 38999999999999998876 7889999999999999999999999986
Q ss_pred CCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCC
Q 040462 271 IPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMK 350 (726)
Q Consensus 271 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~ 350 (726)
. ....++.++.++.++|++||+||||+|.....+++..+++|+|||++.+
T Consensus 139 ~----~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------------- 188 (280)
T 1dbi_A 139 C----HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY-------------------------- 188 (280)
T ss_dssp C----CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT--------------------------
T ss_pred C----CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC--------------------------
Confidence 2 2356777888999999999999999998877788899999999997644
Q ss_pred CceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEee
Q 040462 351 GKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVS 430 (726)
Q Consensus 351 ~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~ 430 (726)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCcc
Q 040462 431 MENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKR 510 (726)
Q Consensus 431 ~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~ 510 (726)
+.++.||++||.. ||+|||++|+++++.+
T Consensus 189 --------------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~~----------- 217 (280)
T 1dbi_A 189 --------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITGN----------- 217 (280)
T ss_dssp --------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETTT-----------
T ss_pred --------------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecCCC-----------
Confidence 4568899999865 9999999999998754
Q ss_pred ccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCC
Q 040462 511 RVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVN 581 (726)
Q Consensus 511 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~ 581 (726)
.|..++|||||||||||++|||++ |.+++.+||++|++||+++.. ....||+|+||+.+|++
T Consensus 218 --~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-----~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 218 --RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-----TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp --EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT-----BTTTBSSEECCHHHHHT
T ss_pred --CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC-----CCCcccCCEECHHHHhc
Confidence 799999999999999999999987 899999999999999998864 34679999999999986
No 11
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=7.4e-52 Score=433.62 Aligned_cols=264 Identities=29% Similarity=0.432 Sum_probs=221.7
Q ss_pred CCccc--cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCC
Q 040462 114 RSWDF--MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTA 191 (726)
Q Consensus 114 ~s~~~--~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~ 191 (726)
.+|.+ ++++ .+|+.+++|+||+|+|||||||++||+|+. ..+.+|. .+...+
T Consensus 4 ~~w~l~~i~~~-~~~~~g~~G~gv~VaViDtGid~~h~~l~~--------------~~g~~~~-----------~~~~~~ 57 (274)
T 1r0r_E 4 VPYGIPLIKAD-KVQAQGFKGANVKVAVLDTGIQASHPDLNV--------------VGGASFV-----------AGEAYN 57 (274)
T ss_dssp CCTHHHHTTHH-HHHHHTCSCTTCEEEEEESCCCTTCTTCCE--------------EEEEECS-----------TTCCTT
T ss_pred CCCchhhcCCH-HHHhcCCCCCCCEEEEEcCCCCCCCHhHcC--------------CCCcccc-----------CCCCCC
Confidence 35654 4445 899999999999999999999999999941 1112221 122346
Q ss_pred CCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhCCCeEEEeccCCC
Q 040462 192 RDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIADGVDIITVSLGGN 270 (726)
Q Consensus 192 ~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~S~G~~ 270 (726)
.|..||||||||||+|... ..| +.||||+|+|+.+|+++..+ +..+++++||+||++++++|||||||..
T Consensus 58 ~d~~gHGT~vAgiia~~~~----~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 128 (274)
T 1r0r_E 58 TDGNGHGTHVAGTVAALDN----TTG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGGA 128 (274)
T ss_dssp CCSSSHHHHHHHHHHCCSS----SSB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS
T ss_pred CCCCCCHHHHHHHHHccCC----CCc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCCC
Confidence 7889999999999999631 112 38999999999999998877 7889999999999999999999999987
Q ss_pred CCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCC----CccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeecc
Q 040462 271 IPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNL----GFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINS 346 (726)
Q Consensus 271 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~ 346 (726)
.. ...+..++.++.++|++||+||||+|... ..++...|++|+||+++.+
T Consensus 129 ~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~---------------------- 182 (274)
T 1r0r_E 129 SG----STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN---------------------- 182 (274)
T ss_dssp SC----CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT----------------------
T ss_pred CC----cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC----------------------
Confidence 22 35677788899999999999999999763 3457788999999997543
Q ss_pred CCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeE
Q 040462 347 FAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPA 426 (726)
Q Consensus 347 ~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~ 426 (726)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCC
Q 040462 427 VAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDP 506 (726)
Q Consensus 427 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 506 (726)
+.++.||++||.+ ||+|||++|+++++.+
T Consensus 183 ------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~------- 211 (274)
T 1r0r_E 183 ------------------------------------SNRASFSSVGAEL--------EVMAPGAGVYSTYPTN------- 211 (274)
T ss_dssp ------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETTT-------
T ss_pred ------------------------------------CCcCccCCCCCCc--------eEEeCCCCeEeecCCC-------
Confidence 4568899999854 9999999999998754
Q ss_pred CCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCC
Q 040462 507 EDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVN 581 (726)
Q Consensus 507 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~ 581 (726)
.|..++|||||||||||++|||+|++|+|++++||++|++||+++. .+..||+|+||+.+|++
T Consensus 212 ------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 212 ------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp ------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS------CHHHHTTCBCCHHHHTC
T ss_pred ------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC------CCCCcccCccCHHHHhC
Confidence 7999999999999999999999999999999999999999999874 36789999999999985
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.1e-51 Score=430.72 Aligned_cols=263 Identities=31% Similarity=0.456 Sum_probs=223.0
Q ss_pred CCccc--cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCC
Q 040462 114 RSWDF--MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTA 191 (726)
Q Consensus 114 ~s~~~--~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~ 191 (726)
.+|.+ ++++ .+|+.+++|+||+|+|||||| .+||+|+. ..+.+|. .+...+
T Consensus 4 ~~W~l~~i~~~-~a~~~g~~G~gv~VaViDtGi-~~h~~l~~--------------~~~~~~~-----------~~~~~~ 56 (269)
T 1gci_A 4 VPWGISRVQAP-AAHNRGLTGSGVKVAVLDTGI-STHPDLNI--------------RGGASFV-----------PGEPST 56 (269)
T ss_dssp CCHHHHHTTHH-HHHHTTCSCTTCEEEEEESCC-CCCTTCCE--------------EEEEECS-----------TTCCSC
T ss_pred CCcChhhcCcH-HHHhcCCCCCCCEEEEECCCC-CCCHhhcc--------------cCCcccC-----------CCCCCC
Confidence 45655 4445 899999999999999999999 89999941 1112221 123346
Q ss_pred CCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhCCCeEEEeccCCC
Q 040462 192 RDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIADGVDIITVSLGGN 270 (726)
Q Consensus 192 ~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~S~G~~ 270 (726)
.|..||||||||||+|.. +..| +.||||+|+|+.+|+++..+ ++.+++++||+|+++++++|||||||..
T Consensus 57 ~d~~gHGT~vAgiia~~~----~~~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~ 127 (269)
T 1gci_A 57 QDGNGHGTHVAGTIAALN----NSIG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSP 127 (269)
T ss_dssp SCSSSHHHHHHHHHHCCC----SSSB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCBS
T ss_pred CCCCCChHHHHHHHhcCc----CCCC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCC
Confidence 789999999999999972 1112 38999999999999998876 7889999999999999999999999987
Q ss_pred CCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCC
Q 040462 271 IPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMK 350 (726)
Q Consensus 271 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~ 350 (726)
.. ...++.++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 128 ~~----~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------------- 177 (269)
T 1gci_A 128 SP----SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN-------------------------- 177 (269)
T ss_dssp SC----CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT--------------------------
T ss_pred CC----CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC--------------------------
Confidence 22 356777788999999999999999999877888899999999997543
Q ss_pred CceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEee
Q 040462 351 GKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVS 430 (726)
Q Consensus 351 ~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~ 430 (726)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCcc
Q 040462 431 MENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKR 510 (726)
Q Consensus 431 ~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~ 510 (726)
+.++.||++||.. ||+|||++|+++++.+
T Consensus 178 --------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~----------- 206 (269)
T 1gci_A 178 --------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPGS----------- 206 (269)
T ss_dssp --------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETTT-----------
T ss_pred --------------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecCCC-----------
Confidence 4568899999965 9999999999998754
Q ss_pred ccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCC
Q 040462 511 RVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVN 581 (726)
Q Consensus 511 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~ 581 (726)
.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. .+..||+|+||+.+|++
T Consensus 207 --~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 207 --TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp --EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS------CHHHHTTCBCCHHHHTC
T ss_pred --CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC------CCCCcccCccCHHHHcC
Confidence 7999999999999999999999999999999999999999999874 36789999999999985
No 13
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.7e-53 Score=462.62 Aligned_cols=297 Identities=22% Similarity=0.236 Sum_probs=201.9
Q ss_pred ccccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcc--cCCce-----eeeee------e
Q 040462 118 FMGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNF--TCNNK-----LIGAR------Y 184 (726)
Q Consensus 118 ~~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f--~~n~k-----lig~~------~ 184 (726)
+.|++ .+|+++..|++|+|||||||||++||+|.+....+....|...++..... ..+.. ..+.. .
T Consensus 17 ipG~~-~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (357)
T 4h6x_A 17 IPGLA-DLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEA 95 (357)
T ss_dssp STTHH-HHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHH
T ss_pred ccCHH-HHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcccccccccccccc
Confidence 44677 89999999999999999999999999999876665666676554432111 00000 00000 0
Q ss_pred c-CCCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCC-----C-CCHHHHHHHHHHHHh
Q 040462 185 Y-TTDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPS-----G-CASTDILAAFDDAIA 257 (726)
Q Consensus 185 ~-~~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~-----g-~~~~~i~~ai~~A~~ 257 (726)
+ .+..++.|.+||||||||||+|+... .+.||||+|+|+.+|++... + ....++++||+||++
T Consensus 96 ~~~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~ 165 (357)
T 4h6x_A 96 VIPDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALE 165 (357)
T ss_dssp HCTTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHH
T ss_pred ccCCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHH
Confidence 0 11234457789999999999997421 23899999999999997542 1 455678999999999
Q ss_pred CCCeEEEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeCCCc
Q 040462 258 DGVDIITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLGNGA 337 (726)
Q Consensus 258 ~gvdVIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~ 337 (726)
+|++|||||||.........+.+..++.++.++|++||+||||+|.....+++..|++|+|||++.+
T Consensus 166 ~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------- 232 (357)
T 4h6x_A 166 LGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD------------- 232 (357)
T ss_dssp TTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT-------------
T ss_pred cCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC-------------
Confidence 9999999999987555556778888899999999999999999998888888999999999997644
Q ss_pred eEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCC
Q 040462 338 TLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEK 417 (726)
Q Consensus 338 ~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 417 (726)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecC
Q 040462 418 VSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVS 497 (726)
Q Consensus 418 ~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~ 497 (726)
+.++.||+||+.. .||||+|||++|+++++
T Consensus 233 ---------------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~ 262 (357)
T 4h6x_A 233 ---------------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEILGAQP 262 (357)
T ss_dssp ---------------------------------------------SSBCTTCC---CT-----TTTEEEEECSSEEECCT
T ss_pred ---------------------------------------------CcccccccCCCCC-----CccceeecCCCeEeccC
Confidence 4678999999753 58999999999999987
Q ss_pred CCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCc
Q 040462 498 PLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSF----HPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGH 573 (726)
Q Consensus 498 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~ 573 (726)
.+ ..|..++|||||||||||++|||+++ +|.|+++|||++|++||+++... ....+..||+|+
T Consensus 263 ~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~-~~~~~~~~G~G~ 329 (357)
T 4h6x_A 263 CT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE-VVEEPERCLRGF 329 (357)
T ss_dssp TC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC---------------CTTCB
T ss_pred CC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC-CCCCcccceeEE
Confidence 65 36778999999999999999999954 57899999999999999987543 233567899999
Q ss_pred cCccccCC
Q 040462 574 VNPVKAVN 581 (726)
Q Consensus 574 vn~~~A~~ 581 (726)
||+.+|++
T Consensus 330 vn~~~A~~ 337 (357)
T 4h6x_A 330 VNIPGAMK 337 (357)
T ss_dssp CCHHHHHH
T ss_pred ecHHHHHH
Confidence 99999987
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=9.8e-52 Score=434.11 Aligned_cols=266 Identities=31% Similarity=0.441 Sum_probs=221.7
Q ss_pred CCccc--cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCC
Q 040462 114 RSWDF--MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTA 191 (726)
Q Consensus 114 ~s~~~--~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~ 191 (726)
.+|.+ ++++ .+|..+++|+||+|||||||||++||+|+.. .+.+|..+ +....
T Consensus 4 ~~w~l~~i~~~-~~~~~g~~G~gv~VaViDtGid~~h~~l~~~--------------~g~~~~~~----------~~~~~ 58 (281)
T 1to2_E 4 VPYGVSQIKAP-ALHSQGYTGSNVKVAVIDSGIDSSHPDLKVA--------------GGASMVPS----------ETNPF 58 (281)
T ss_dssp CCHHHHHTTHH-HHHHHTCSCTTCEEEEEESCCCTTCTTCCEE--------------EEEECCTT----------CCCTT
T ss_pred CCcchhhcChH-HHHhcCCCCCCCEEEEEcCCCCCCCHHHcCc--------------CCccccCC----------CCCCC
Confidence 34554 3444 8999999999999999999999999999521 11122111 11223
Q ss_pred CCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhCCCeEEEeccCCC
Q 040462 192 RDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIADGVDIITVSLGGN 270 (726)
Q Consensus 192 ~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~S~G~~ 270 (726)
.|..||||||||||+|... ..| +.||||+|+|+.+|+++..+ +..++++++|+|+++++++|||||||..
T Consensus 59 ~d~~gHGT~vAgiia~~~~----~~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~ 129 (281)
T 1to2_E 59 QDNNSHGTHVAGTVAALNN----SIG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGP 129 (281)
T ss_dssp CCSSSHHHHHHHHHHCCSS----SSS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBS
T ss_pred CCCCCcHHHHHHHHhccCC----CCc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCC
Confidence 6889999999999999731 112 38999999999999998776 7889999999999999999999999987
Q ss_pred CCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCC----CccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeecc
Q 040462 271 IPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNL----GFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINS 346 (726)
Q Consensus 271 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~ 346 (726)
.. ...+..++.++.++|++||+||||+|... ..++...|++|+|||++.+
T Consensus 130 ~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~---------------------- 183 (281)
T 1to2_E 130 SG----SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS---------------------- 183 (281)
T ss_dssp CC----CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT----------------------
T ss_pred CC----CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC----------------------
Confidence 22 35677788899999999999999999763 3467788999999997543
Q ss_pred CCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeE
Q 040462 347 FAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPA 426 (726)
Q Consensus 347 ~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~ 426 (726)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCC
Q 040462 427 VAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDP 506 (726)
Q Consensus 427 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 506 (726)
+.++.||++||.. ||+|||++|+++++.+
T Consensus 184 ------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~~~~~------- 212 (281)
T 1to2_E 184 ------------------------------------NQRASFSSVGPEL--------DVMAPGVSIQSTLPGN------- 212 (281)
T ss_dssp ------------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEEETTT-------
T ss_pred ------------------------------------CCcCCcCCCCCCc--------eEEecCCCeEeecCCC-------
Confidence 4568899999965 9999999999998754
Q ss_pred CCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCCC
Q 040462 507 EDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVNP 582 (726)
Q Consensus 507 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~~ 582 (726)
.|..++|||||||||||++|||+|++|+|++++||++|++||+++. .++.||+|+||+.+|+++
T Consensus 213 ------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 213 ------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp ------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS------CHHHHTTCBCCHHHHTSS
T ss_pred ------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC------CCCCcccceecHHHHhhh
Confidence 7999999999999999999999999999999999999999999874 367899999999999985
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=4e-51 Score=429.18 Aligned_cols=264 Identities=29% Similarity=0.404 Sum_probs=222.8
Q ss_pred CCccc--cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeec-CCCCC
Q 040462 114 RSWDF--MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYY-TTDGT 190 (726)
Q Consensus 114 ~s~~~--~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~-~~~~~ 190 (726)
.+|.+ ++++ .+|+.. +|+||+|+|||||||++||+|.++ ++..++| .+...
T Consensus 11 ~~w~l~~i~~~-~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~~~~~~ 64 (279)
T 1thm_A 11 RQYGPQKIQAP-QAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK------------------------VVGGWDFVDNDST 64 (279)
T ss_dssp HCCHHHHTTHH-HHHTTC-CCTTCEEEEEESCCCTTCTTTTTT------------------------EEEEEETTTTBSC
T ss_pred cccChhhCChH-HHHhcC-CCCCCEEEEEccCCCCCCcchhcC------------------------ccccccccCCCCC
Confidence 45655 3444 899975 799999999999999999999864 2222233 22345
Q ss_pred CCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhCCCeEEEeccCC
Q 040462 191 ARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIADGVDIITVSLGG 269 (726)
Q Consensus 191 ~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gvdVIn~S~G~ 269 (726)
+.|..||||||||||+|...++. | +.||||+|+|+.+|+++..+ ++.+++++||+||+++|++|||||||.
T Consensus 65 ~~d~~gHGT~vAgiia~~~~n~~---g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~ 136 (279)
T 1thm_A 65 PQNGNGHGTHCAGIAAAVTNNST---G-----IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGG 136 (279)
T ss_dssp CCCSSSHHHHHHHHHHCCCSSSS---S-----CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCB
T ss_pred CCCCCCcHHHHHHHHhCccCCCC---c-----cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 67899999999999999753221 2 38999999999999998876 788999999999999999999999998
Q ss_pred CCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCC
Q 040462 270 NIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAM 349 (726)
Q Consensus 270 ~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~ 349 (726)
.. ..+.+..++.++.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 137 ~~----~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------- 187 (279)
T 1thm_A 137 TV----GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------------------------- 187 (279)
T ss_dssp SS----CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT-------------------------
T ss_pred CC----CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC-------------------------
Confidence 72 2356777888999999999999999998877888899999999997644
Q ss_pred CCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEe
Q 040462 350 KGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAV 429 (726)
Q Consensus 350 ~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i 429 (726)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCc
Q 040462 430 SMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDK 509 (726)
Q Consensus 430 ~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~ 509 (726)
+.++.||++||.. ||+|||++|+++++..
T Consensus 188 ---------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~~~---------- 216 (279)
T 1thm_A 188 ---------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPTS---------- 216 (279)
T ss_dssp ---------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETTT----------
T ss_pred ---------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeCCC----------
Confidence 4568899999865 9999999999998754
Q ss_pred cccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCC
Q 040462 510 RRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVN 581 (726)
Q Consensus 510 ~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~ 581 (726)
.|..++|||||||||||++||| ++|.+++++||++|++||+++... ...||+|+||+.+|++
T Consensus 217 ---~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-----~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 217 ---TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-----GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ---EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB-----TTTBSSEECCHHHHHH
T ss_pred ---CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC-----CccccCCeeCHHHHhc
Confidence 7999999999999999999999 579999999999999999998653 2579999999999975
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=4e-51 Score=438.45 Aligned_cols=273 Identities=26% Similarity=0.322 Sum_probs=219.6
Q ss_pred cCCCccc--cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCC
Q 040462 112 TTRSWDF--MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDG 189 (726)
Q Consensus 112 ~~~s~~~--~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~ 189 (726)
...+|.+ ++++ .+|+.+++|+||+|||||||||++||+|.++ ...+.+|..+. -....
T Consensus 19 ~~~~w~l~~i~~~-~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~------------~~~~~~~~~~~-------~~~~~ 78 (327)
T 2x8j_A 19 SEVPMGVEIVEAP-AVWRASAKGAGQIIGVIDTGCQVDHPDLAER------------IIGGVNLTTDY-------GGDET 78 (327)
T ss_dssp BSCCHHHHHTTHH-HHHHHHGGGTTCEEEEEESCCCTTCTTTGGG------------EEEEEECSSGG-------GGCTT
T ss_pred cccCcchhhcChH-HHHhcCCCCCCCEEEEEcCCCCCCChhHhhc------------ccCCccccCCC-------CCCCC
Confidence 3346655 4555 8999999999999999999999999999754 11122221110 00122
Q ss_pred CCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHh------CCCeE
Q 040462 190 TARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIA------DGVDI 262 (726)
Q Consensus 190 ~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~------~gvdV 262 (726)
...|..||||||||||+|... + .| +.||||+|+|+.+|+++..| ++.+++++||+||++ ++++|
T Consensus 79 ~~~d~~gHGT~VAgiia~~~~-~-------~g-~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~V 149 (327)
T 2x8j_A 79 NFSDNNGHGTHVAGTVAAAET-G-------SG-VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRI 149 (327)
T ss_dssp CCCCSSSHHHHHHHHHHCCCC-S-------SB-CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSE
T ss_pred CCCCCCCchHHHHHHHhccCC-C-------CC-cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceE
Confidence 357899999999999999731 1 12 38999999999999998877 788999999999999 89999
Q ss_pred EEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCC-----CccccCCCceEEEeeeccCcceeeEEEeCCCc
Q 040462 263 ITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNL-----GFVYSVAPWLMSVAASTTDRLFVDKVLLGNGA 337 (726)
Q Consensus 263 In~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~ 337 (726)
||||||... ....+..++..|.++|++||+||||+|... ..+++..|++|+|||++.+
T Consensus 150 in~S~G~~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~------------- 212 (327)
T 2x8j_A 150 ITMSLGGPT----DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD------------- 212 (327)
T ss_dssp EEECEEBSC----CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT-------------
T ss_pred EEECCCcCC----CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC-------------
Confidence 999999872 235677778889999999999999999752 3567788999999997644
Q ss_pred eEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCC
Q 040462 338 TLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEK 417 (726)
Q Consensus 338 ~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 417 (726)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecC
Q 040462 418 VSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVS 497 (726)
Q Consensus 418 ~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~ 497 (726)
+.++.||++||. |||+|||++|+++++
T Consensus 213 ---------------------------------------------~~~~~fS~~G~~--------~di~APG~~i~s~~~ 239 (327)
T 2x8j_A 213 ---------------------------------------------LRLSDFTNTNEE--------IDIVAPGVGIKSTYL 239 (327)
T ss_dssp ---------------------------------------------CCBSCC---CCC--------CSEEEECSSEEEECS
T ss_pred ---------------------------------------------CCCCCccCCCCC--------ceEecCcCceEeecC
Confidence 456889999985 499999999999987
Q ss_pred CCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhh-----CCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCC
Q 040462 498 PLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSF-----HPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSG 572 (726)
Q Consensus 498 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G 572 (726)
.+ .|..++|||||||||||++|||+|+ +|.|++.+||++|++||+++.. .+..+|+|
T Consensus 240 ~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~-----~~~~~G~G 301 (327)
T 2x8j_A 240 DS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF-----TAQAEGNG 301 (327)
T ss_dssp TT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS-----CHHHHTTC
T ss_pred CC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC-----CCCceeee
Confidence 54 6999999999999999999999999 9999999999999999998753 56789999
Q ss_pred ccCccccCC
Q 040462 573 HVNPVKAVN 581 (726)
Q Consensus 573 ~vn~~~A~~ 581 (726)
+||+.+|++
T Consensus 302 ~vd~~~A~~ 310 (327)
T 2x8j_A 302 FLTLDLVER 310 (327)
T ss_dssp EECTTHHHH
T ss_pred EECHHHHHH
Confidence 999999987
No 17
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=5.4e-50 Score=427.63 Aligned_cols=288 Identities=30% Similarity=0.349 Sum_probs=226.8
Q ss_pred cCCCccc--cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCC
Q 040462 112 TTRSWDF--MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDG 189 (726)
Q Consensus 112 ~~~s~~~--~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~ 189 (726)
...+|.+ ++++ .+|+.+.+|+||+|+|||||||++||+|.++ +..+.+|..+... ...
T Consensus 4 ~~~~W~l~~i~~~-~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~------------~~~~~~~~~~~~~-------~~~ 63 (310)
T 2ixt_A 4 QQIPWGIKAIYNN-DTLTSTTGGSGINIAVLDTGVNTSHPDLVNN------------VEQCKDFTGATTP-------INN 63 (310)
T ss_dssp CSSCHHHHHHHTC-TTCCCCCCCTTCEEEEEESCCCTTCTTTTTT------------EEEEEESSSSSSC-------EET
T ss_pred ccCCCchhhcCch-hhhhccCCCCCcEEEEEecCCCCCCHHHhhc------------ccccccccCCCCC-------CCC
Confidence 3456655 4455 8999999999999999999999999999864 2222233211100 013
Q ss_pred CCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhCCC-----eEE
Q 040462 190 TARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIADGV-----DII 263 (726)
Q Consensus 190 ~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gv-----dVI 263 (726)
...|..||||||||||+|....+ ...+.||||+|+|+.+|+++..+ ++.+++++||+|++++++ +||
T Consensus 64 ~~~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vi 136 (310)
T 2ixt_A 64 SCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTII 136 (310)
T ss_dssp CCCCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEE
Confidence 45788999999999999974211 11238999999999999998876 788999999999999988 999
Q ss_pred EeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCC--CCccccCCCceEEEeeeccCcceeeEEEeCCCceEee
Q 040462 264 TVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSN--LGFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSG 341 (726)
Q Consensus 264 n~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g 341 (726)
|||||... ....+..++.++.++|++||+||||+|.. ...+++..|++|+|||++.... +
T Consensus 137 n~S~G~~~----~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~--------~------ 198 (310)
T 2ixt_A 137 SMSLGSSA----NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ--------N------ 198 (310)
T ss_dssp EECCCBSS----CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE--------T------
T ss_pred EEcCCCCC----CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc--------C------
Confidence 99999872 24567777888999999999999999976 3456778899999999763210 0
Q ss_pred eeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceee
Q 040462 342 YSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFV 421 (726)
Q Consensus 342 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~ 421 (726)
T Consensus 199 -------------------------------------------------------------------------------- 198 (310)
T 2ixt_A 199 -------------------------------------------------------------------------------- 198 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCC----CCCcCCceEeCCccEEeecC
Q 040462 422 VSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAIL----PDILKPDISAPGVDILAAVS 497 (726)
Q Consensus 422 ~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~----~~~lKPDI~APG~~I~sa~~ 497 (726)
....++.||++||.... ..+.||||+|||++|+++++
T Consensus 199 ---------------------------------------g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~ 239 (310)
T 2ixt_A 199 ---------------------------------------GTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWY 239 (310)
T ss_dssp ---------------------------------------TEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECT
T ss_pred ---------------------------------------CCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecC
Confidence 00156889999995421 12359999999999999987
Q ss_pred CCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCC----CCCCCCcCCCCc
Q 040462 498 PLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSK----VNDAEVAFGSGH 573 (726)
Q Consensus 498 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~----~~~~~~~~G~G~ 573 (726)
.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++.... .+..+..||||+
T Consensus 240 ~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~a~~g~d~~~G~G~ 306 (310)
T 2ixt_A 240 NG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGGYGAAIGDDYASGFGF 306 (310)
T ss_dssp TS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBSTTCCSSSBTTTBTCB
T ss_pred CC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCCcccccCCccccccce
Confidence 54 7999999999999999999999999999999999999999999876431 345788999999
Q ss_pred cCc
Q 040462 574 VNP 576 (726)
Q Consensus 574 vn~ 576 (726)
+|+
T Consensus 307 ~~v 309 (310)
T 2ixt_A 307 ARV 309 (310)
T ss_dssp CCC
T ss_pred eec
Confidence 986
No 18
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=8.7e-51 Score=427.81 Aligned_cols=265 Identities=22% Similarity=0.234 Sum_probs=213.2
Q ss_pred CCCC-CCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCcchhhhcccc
Q 040462 129 HSVE-SNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHGTHTASTAAG 207 (726)
Q Consensus 129 ~~~G-~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHGThVAgiaag 207 (726)
..+| +||+|||||||||++||+|.++. ..+.++... .......|.+||||||||||+|
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~------------~~~~~~~~~---------~~~~~d~~~~gHGT~VAGiiag 61 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGAD------------LTVLPTLAP---------TAARSDGFMSAHGTHVASIIFG 61 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCE------------EEECCCSSC---------CCCCTTCHHHHHHHHHHHHHHC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCe------------eecCcCCCC---------CCCCCCCCCCCcccceeehhhc
Confidence 3578 69999999999999999998651 111111100 0112233457999999999999
Q ss_pred CcCCCCccccccCcceeecccCceEEEEEeeCCCC--CCHHHHHHHHHHHHhCCCeEEEeccCCCCCCCccccHHHHHHH
Q 040462 208 NEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG--CASTDILAAFDDAIADGVDIITVSLGGNIPVDFIKDAIAIGAF 285 (726)
Q Consensus 208 ~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~A~~~gvdVIn~S~G~~~~~~~~~~~~~~a~~ 285 (726)
+... .+.||||+|+|+.+|++.+.+ .+..++++||+||++++++|||||||...........+..++.
T Consensus 62 ~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~ai~ 131 (282)
T 3zxy_A 62 QPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENAVS 131 (282)
T ss_dssp CTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHH
T ss_pred cCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccHHHHHHHH
Confidence 7421 238999999999999986543 6788999999999999999999999976333445567788888
Q ss_pred HHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCC
Q 040462 286 HAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSES 365 (726)
Q Consensus 286 ~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~ 365 (726)
.+.++|+++|+||||+|......+...|++|+|||++.+
T Consensus 132 ~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~----------------------------------------- 170 (282)
T 3zxy_A 132 LCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH----------------------------------------- 170 (282)
T ss_dssp HHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT-----------------------------------------
T ss_pred HHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC-----------------------------------------
Confidence 999999999999999999888888999999999997544
Q ss_pred CCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCC
Q 040462 366 CPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTK 445 (726)
Q Consensus 366 ~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~ 445 (726)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceeecccccchhH
Q 040462 446 KPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESGTSMACP 525 (726)
Q Consensus 446 ~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP 525 (726)
+.++.||+||+. ..||||+|||++|+++++.+ .|..++|||||||
T Consensus 171 -----------------~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP 215 (282)
T 3zxy_A 171 -----------------GHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG-------------GTERLSGTAFATP 215 (282)
T ss_dssp -----------------SCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS-------------CEEEECSHHHHHH
T ss_pred -----------------CccccccCCCCC-----ccccceeccCcceeeecCCC-------------ceeecCCCcccch
Confidence 456789999875 36889999999999998765 7999999999999
Q ss_pred HHHHHHHHHHhhC----CCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCC
Q 040462 526 HAAAVAAYVKSFH----PDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVN 581 (726)
Q Consensus 526 ~VAG~aALl~~~~----P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~ 581 (726)
||||++|||++++ |.++|++||++|++||+++... .+.....||+|+||+.+|++
T Consensus 216 ~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~-~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 216 IVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD-APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC--------CGGGTTCBCCHHHHHH
T ss_pred HHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC-CCCccCceeeeEeCHHHHHH
Confidence 9999999999875 7899999999999999987653 23456789999999999986
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=6.6e-51 Score=433.99 Aligned_cols=276 Identities=24% Similarity=0.288 Sum_probs=223.5
Q ss_pred cccccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCC
Q 040462 117 DFMGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDG 196 (726)
Q Consensus 117 ~~~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~g 196 (726)
++.|++ ++|+....++||+|||||||||++||+|.++. +.+ ..+|.. .+.....|..|
T Consensus 6 ~i~G~~-~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~-------~~~----~~~~~~----------~~~~~~~d~~g 63 (306)
T 4h6w_A 6 NIPGLK-KLWSETRGDPKICVAVLDGIVDQNHPCFIGAD-------LTR----LPSLVS----------GEANANGSMST 63 (306)
T ss_dssp -CTTHH-HHHHHCSCCTTCEEEEESSCCCTTSGGGTTCE-------EEE----CC--------------------CCCCH
T ss_pred CCcCHH-HHHhhhCCCCCCEEEEEcCCCCCCChhHcCCc-------ccC----CCcccC----------CCCCCCCCCCC
Confidence 455777 89999877799999999999999999998651 110 001100 01223456789
Q ss_pred CcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC--CCHHHHHHHHHHHHhCCCeEEEeccCCCCCCC
Q 040462 197 HGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG--CASTDILAAFDDAIADGVDIITVSLGGNIPVD 274 (726)
Q Consensus 197 HGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~A~~~gvdVIn~S~G~~~~~~ 274 (726)
|||||||||+|+.. +.+.||||+|+|+.+|++.+.+ +...++++||+||++++++|||+|||......
T Consensus 64 HGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~~~ 133 (306)
T 4h6w_A 64 HGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTDAG 133 (306)
T ss_dssp HHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSS
T ss_pred chHHHHHHHHcccc----------CCcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeeccccccccCC
Confidence 99999999999742 1238999999999999986643 78888999999999999999999999753344
Q ss_pred ccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCcee
Q 040462 275 FIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKF 354 (726)
Q Consensus 275 ~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~ 354 (726)
.....++.++..+.++|+++|++|||+|.....++...+++|+|||++.+
T Consensus 134 ~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~------------------------------ 183 (306)
T 4h6w_A 134 EADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ------------------------------ 183 (306)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT------------------------------
T ss_pred CccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC------------------------------
Confidence 45667888888999999999999999999888888899999999997544
Q ss_pred eEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhH
Q 040462 355 PLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENF 434 (726)
Q Consensus 355 ~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~ 434 (726)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccce
Q 040462 435 NSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKY 514 (726)
Q Consensus 435 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y 514 (726)
..++.||++|+. ..||||+|||++|+++++.+ .|
T Consensus 184 ----------------------------~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~~-------------~~ 217 (306)
T 4h6w_A 184 ----------------------------GKPVDFSNWGDA-----YQKQGILAPGKDILGAKPNG-------------GT 217 (306)
T ss_dssp ----------------------------SCBCSSSCBCHH-----HHHHEEEEECSSEEEECTTS-------------CE
T ss_pred ----------------------------CCccccccccCC-----cCcceeecCCcCcccccCCC-------------ce
Confidence 456788999864 35889999999999998764 79
Q ss_pred eecccccchhHHHHHHHHHHHhh----CCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCC
Q 040462 515 SIESGTSMACPHAAAVAAYVKSF----HPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVN 581 (726)
Q Consensus 515 ~~~sGTSmAaP~VAG~aALl~~~----~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~ 581 (726)
..++|||||||||||++|||+++ +|.|+|++||++|++||+++...+ ......||+|+||+.+|++
T Consensus 218 ~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~-~~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 218 IRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD-TDDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT-CSCGGGGTTCBCCHHHHHH
T ss_pred eccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC-CCCCCCcceeecCHHHHHH
Confidence 99999999999999999999865 699999999999999999886532 2344579999999999987
No 20
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.5e-50 Score=438.58 Aligned_cols=279 Identities=23% Similarity=0.218 Sum_probs=223.3
Q ss_pred CCCccc--cccchhhccCCCCCC--CcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCC
Q 040462 113 TRSWDF--MGLNQSITRKHSVES--NIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTD 188 (726)
Q Consensus 113 ~~s~~~--~g~~~~~w~~~~~G~--gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~ 188 (726)
..+|.+ ++++ .+|+. .+|+ ||+||||||||| +||+|.++ ...+.+|..+.. .+ ..
T Consensus 22 ~~~W~l~~i~~~-~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~------------~~~~~~~~~~~~-----~~-~~ 80 (347)
T 2iy9_A 22 EKPWYFDAIGLT-ETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS------------EFAKFSFTQDGS-----PF-PV 80 (347)
T ss_dssp -CCHHHHHHTCC-HHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC------------EEEEEECBTTCC-----SS-CC
T ss_pred ccCcchhhCChH-HHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC------------cccCCcccCCCC-----CC-CC
Confidence 456654 5566 89998 8999 999999999999 99999864 112222321100 00 01
Q ss_pred CCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCCCHHHHHHHHHHHHhC------CCeE
Q 040462 189 GTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGCASTDILAAFDDAIAD------GVDI 262 (726)
Q Consensus 189 ~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~------gvdV 262 (726)
..+.|..||||||||||+|+ .|. .||||+|+|+.+|+++..+.. ++++||+||+++ |++|
T Consensus 81 ~~~~d~~gHGT~vAgiia~~-------~g~-----~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~~~~V 146 (347)
T 2iy9_A 81 KKSEALYIHGTAMASLIASR-------YGI-----YGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPGEEKI 146 (347)
T ss_dssp SSSHHHHHHHHHHHHHHHCS-------SSS-----CCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTTEEEE
T ss_pred CCCCCCCCcHHHHHHHHhcc-------cCC-----cccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccCCceE
Confidence 24567899999999999997 122 899999999999999875533 999999999999 9999
Q ss_pred EEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCC-------CCccccCCC----------ceEEEeeecc--
Q 040462 263 ITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSN-------LGFVYSVAP----------WLMSVAASTT-- 323 (726)
Q Consensus 263 In~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p----------~vitVgA~~~-- 323 (726)
||||||.. ......+.+..++..+.++|++||+||||+|.. ...+++..+ ++|+|||++.
T Consensus 147 in~S~G~~-~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~ 225 (347)
T 2iy9_A 147 INISGGQK-GVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYR 225 (347)
T ss_dssp EEESSCBC-CC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCC
T ss_pred EEeccccC-CCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCC
Confidence 99999976 223456778888889999999999999999985 345677888 9999999865
Q ss_pred CcceeeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhc
Q 040462 324 DRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKV 403 (726)
Q Consensus 324 ~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~ 403 (726)
+....
T Consensus 226 ~g~~~--------------------------------------------------------------------------- 230 (347)
T 2iy9_A 226 KGETP--------------------------------------------------------------------------- 230 (347)
T ss_dssp TTSCC---------------------------------------------------------------------------
T ss_pred CCcee---------------------------------------------------------------------------
Confidence 31000
Q ss_pred CceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCC
Q 040462 404 GAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKP 483 (726)
Q Consensus 404 Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKP 483 (726)
......+.||++||+ ||
T Consensus 231 --------------------------------------------------------~~~~~~~~fS~~G~~-------~~ 247 (347)
T 2iy9_A 231 --------------------------------------------------------VLHGGGITGSRFGNN-------WV 247 (347)
T ss_dssp --------------------------------------------------------CBCCCSSSCBCBCTT-------TC
T ss_pred --------------------------------------------------------cccCCCCCCCCCCCC-------CC
Confidence 001345799999995 67
Q ss_pred ceEeCCccEEeecCCCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCC
Q 040462 484 DISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVN 563 (726)
Q Consensus 484 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~ 563 (726)
||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++...
T Consensus 248 di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~--- 311 (347)
T 2iy9_A 248 DIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSL--- 311 (347)
T ss_dssp SEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGG---
T ss_pred EEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCC---
Confidence 9999999999998754 799999999999999999999999999999999999999999987664
Q ss_pred CCCCcCCCCccCccccCCC
Q 040462 564 DAEVAFGSGHVNPVKAVNP 582 (726)
Q Consensus 564 ~~~~~~G~G~vn~~~A~~~ 582 (726)
.+..+|+|+||+.+|++.
T Consensus 312 -~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 312 -VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp -TTTSGGGEECCHHHHHHH
T ss_pred -CCccccCCEecHHHHHHH
Confidence 246899999999999974
No 21
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=2.5e-50 Score=435.81 Aligned_cols=289 Identities=26% Similarity=0.374 Sum_probs=227.8
Q ss_pred CCCccc-----cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCce---------
Q 040462 113 TRSWDF-----MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNK--------- 178 (726)
Q Consensus 113 ~~s~~~-----~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~k--------- 178 (726)
..+|.+ ++++ .+|+.+++|+||+||||||||+ +||+|.++- ..+++|..+..
T Consensus 8 ~~qW~l~~~~~i~~~-~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~------------~~~~~~~~~~~~~~d~~~~~ 73 (340)
T 3lpc_A 8 REQWHYFDRYGVKAD-KVWDMGFTGQNVVVAVVDTGIL-HHRDLNANV------------LPGYDFISNSQISLDGDGRD 73 (340)
T ss_dssp GGCHHHHSTTSCCHH-HHHHHTCSCTTCEEEEEESCBC-CCTTTGGGB------------CCCEECCCCHHHHCSSSSSB
T ss_pred hhccCCCCcCCCCHH-HHHHhcCCCCCeEEEEEcCCCC-CChhhhccc------------ccCccccCCccccccCCCcc
Confidence 456776 5566 8999999999999999999998 999998641 11122211100
Q ss_pred ---eeeeeecC---------CCCCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCCCHH
Q 040462 179 ---LIGARYYT---------TDGTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGCAST 246 (726)
Q Consensus 179 ---lig~~~~~---------~~~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~~~~ 246 (726)
.-...++. ......|..||||||||||+|...++. | +.||||+|+|+.+|+++..++..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~~v~~~~~~~~~ 145 (340)
T 3lpc_A 74 ADPFDEGDWFDNWACGGRPDPRKERSDSSWHGSHVAGTIAAVTNNRI---G-----VAGVAYGAKVVPVRALGRCGGYDS 145 (340)
T ss_dssp SCCBCCCCCBCTTTTSCTTCGGGSCBCCCCHHHHHHHHHHCCCSSSS---S-----CCCTTTTSEEEEEECCBTTBCCHH
T ss_pred CCccccccccccccccCCCCcccCCCCCCCCHHHHHHHHHccCCCCC---c-----ceeecCCCEEEEEEEecCCCCcHH
Confidence 00000000 112357889999999999999753322 2 389999999999999988778899
Q ss_pred HHHHHHHHHHh----------CCCeEEEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCce
Q 040462 247 DILAAFDDAIA----------DGVDIITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLG-FVYSVAPWL 315 (726)
Q Consensus 247 ~i~~ai~~A~~----------~gvdVIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~v 315 (726)
+++++|+||++ ++++|||||||... .....+..++..+.++|++||+||||+|.... .++...+++
T Consensus 146 ~~~~ai~~a~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~v 222 (340)
T 3lpc_A 146 DISDGLYWAAGGRIAGIPENRNPAKVINMSLGSDG---QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNV 222 (340)
T ss_dssp HHHHHHHHHHTCCCTTSCCCSSCCSEEEECCCEES---CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSC
T ss_pred HHHHHHHHHhcccccccccccCCCeEEEeCcCCCC---CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCce
Confidence 99999999998 89999999999752 23455677778899999999999999998654 467788999
Q ss_pred EEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecc
Q 040462 316 MSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFD 395 (726)
Q Consensus 316 itVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~ 395 (726)
|+|||++.+
T Consensus 223 i~Vga~~~~----------------------------------------------------------------------- 231 (340)
T 3lpc_A 223 LSVGATTSR----------------------------------------------------------------------- 231 (340)
T ss_dssp EEEEEECTT-----------------------------------------------------------------------
T ss_pred EEEecCCCC-----------------------------------------------------------------------
Confidence 999997644
Q ss_pred hhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCC
Q 040462 396 GYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNA 475 (726)
Q Consensus 396 ~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~ 475 (726)
+.++.||++||
T Consensus 232 -------------------------------------------------------------------~~~~~~S~~g~-- 242 (340)
T 3lpc_A 232 -------------------------------------------------------------------GIRASFSNYGV-- 242 (340)
T ss_dssp -------------------------------------------------------------------SSBCTTCCBST--
T ss_pred -------------------------------------------------------------------CCcCCCCCCCC--
Confidence 45688999998
Q ss_pred CCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhh-C---CCCCHHHHHHHHH
Q 040462 476 ILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSF-H---PDWSPSAIRSAIM 551 (726)
Q Consensus 476 ~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---P~~sp~~Ik~~L~ 551 (726)
||||+|||++|+++++.... ......|..++|||||||||||++|||+|+ + |.|++++||++|+
T Consensus 243 ------~~di~ApG~~i~s~~~~~~~------~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~ 310 (340)
T 3lpc_A 243 ------DVDLAAPGQDILSTVDSGTR------RPVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLV 310 (340)
T ss_dssp ------TCCEEEECSSEEEEEESCSS------SCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred ------CceEEecCCCeecccCCCCc------CCCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHH
Confidence 45999999999999876521 111246999999999999999999999998 5 9999999999999
Q ss_pred hccccCCCCCCCCCCCcCCCCccCccccCCC
Q 040462 552 TTAWPMNSSKVNDAEVAFGSGHVNPVKAVNP 582 (726)
Q Consensus 552 ~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~~ 582 (726)
+||+++... .+..||+|+||+.+|++.
T Consensus 311 ~tA~~~~~~----~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 311 STTSPFNGR----LDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp HTCBCCSSC----CSSCCCSSBCCHHHHHHH
T ss_pred hcCCcCCCC----CCCCcccceecHHHHHHH
Confidence 999988543 567899999999999874
No 22
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.9e-50 Score=431.06 Aligned_cols=273 Identities=27% Similarity=0.380 Sum_probs=223.3
Q ss_pred CCCccc--cccchhhccCCCCCC--CcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCC
Q 040462 113 TRSWDF--MGLNQSITRKHSVES--NIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTD 188 (726)
Q Consensus 113 ~~s~~~--~g~~~~~w~~~~~G~--gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~ 188 (726)
..+|.+ ++++ .+|+.+ +|+ ||+|||||||||++||+|.++ ...+.+|..+. . ....
T Consensus 7 ~~~W~l~~i~~~-~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~------------~~~~~~~~~~~-~-----~~~~ 66 (320)
T 2z30_A 7 TIPWGIERVKAP-SVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN------------IAWCVSTLRGK-V-----STKL 66 (320)
T ss_dssp CCCHHHHHTTCG-GGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG------------EEEEEECGGGC-C-----BCCH
T ss_pred CCCCChhhcChH-HHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc------------cccCccccCCc-c-----CCCC
Confidence 346655 4555 899987 999 999999999999999999864 11122221110 0 0001
Q ss_pred CCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhC---------
Q 040462 189 GTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIAD--------- 258 (726)
Q Consensus 189 ~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--------- 258 (726)
....|..||||||||||+|.. +..| +.||||+|+|+.+|+++..| +..+++++||+||+++
T Consensus 67 ~~~~d~~gHGT~vAgiia~~~----n~~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~ 137 (320)
T 2z30_A 67 RDCADQNGHGTHVIGTIAALN----NDIG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDG 137 (320)
T ss_dssp HHHBCSSSHHHHHHHHHHCCS----SSBS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTS
T ss_pred CCCCCCCCCHHHHHHHHHccc----CCCc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCccccccccc
Confidence 124678999999999999962 1112 38999999999999998877 7889999999999987
Q ss_pred -----------CCeEEEeccCCCCCCCccccHHHHHHHHHHhCCcEEEEecCCCCCCCCccccCCCceEEEeeeccCcce
Q 040462 259 -----------GVDIITVSLGGNIPVDFIKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFVYSVAPWLMSVAASTTDRLF 327 (726)
Q Consensus 259 -----------gvdVIn~S~G~~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~~~~~ 327 (726)
+++|||||||.... ...+..++.++.++|++||+||||+|.....+++..|++|+|||++.+
T Consensus 138 ~~~~~~~~~~~~~~Vin~S~G~~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--- 210 (320)
T 2z30_A 138 DGIIAGDPDDDAAEVISMSLGGPAD----DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN--- 210 (320)
T ss_dssp SSCCTTCTTSCCCSEEEECEEBSCC----CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT---
T ss_pred ccccccccccCCceEEEecCCCCCC----CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeCCC---
Confidence 99999999998732 356677777899999999999999998877888899999999997643
Q ss_pred eeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceE
Q 040462 328 VDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAG 407 (726)
Q Consensus 328 ~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g 407 (726)
T Consensus 211 -------------------------------------------------------------------------------- 210 (320)
T 2z30_A 211 -------------------------------------------------------------------------------- 210 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEe
Q 040462 408 SILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISA 487 (726)
Q Consensus 408 ~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~A 487 (726)
+.++.||++|| +|+|
T Consensus 211 -------------------------------------------------------~~~~~~S~~g~----------~v~A 225 (320)
T 2z30_A 211 -------------------------------------------------------DNIASFSNRQP----------EVSA 225 (320)
T ss_dssp -------------------------------------------------------SCBCTTSCSSC----------SEEE
T ss_pred -------------------------------------------------------CCcCcccCCCC----------CEEe
Confidence 45688999997 7899
Q ss_pred CCccEEeecCCCCCCCCCCCCccccceeecccccchhHHHHHHHHHHHhhC-------------CCCCHHHHHHHHHhcc
Q 040462 488 PGVDILAAVSPLAPISTDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFH-------------PDWSPSAIRSAIMTTA 554 (726)
Q Consensus 488 PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~-------------P~~sp~~Ik~~L~~TA 554 (726)
||++|+++++.+ .|..++|||||||||||++|||+|++ |.|++.+||++|++||
T Consensus 226 PG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta 292 (320)
T 2z30_A 226 PGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITA 292 (320)
T ss_dssp ECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHS
T ss_pred CCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhC
Confidence 999999998754 79999999999999999999999999 9999999999999999
Q ss_pred ccCCCCCCCCCCCcCCCCccCccccCCC
Q 040462 555 WPMNSSKVNDAEVAFGSGHVNPVKAVNP 582 (726)
Q Consensus 555 ~~i~~~~~~~~~~~~G~G~vn~~~A~~~ 582 (726)
+++.. +..+..||+|+||+.+|++.
T Consensus 293 ~~~~~---~g~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 293 DDLGP---TGWDADYGYGVVRAALAVQA 317 (320)
T ss_dssp BCCSS---SSSBTTTBTCBCCHHHHHHH
T ss_pred ccCCC---CCCCCCcCCceeCHHHHHHH
Confidence 98754 23567899999999999863
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=4.7e-49 Score=439.32 Aligned_cols=297 Identities=27% Similarity=0.321 Sum_probs=231.9
Q ss_pred ccccccchhhcc-CCCCCCCcEEEEEcccCCC------CCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCC
Q 040462 116 WDFMGLNQSITR-KHSVESNIIIGVIDSGIWP------ESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTD 188 (726)
Q Consensus 116 ~~~~g~~~~~w~-~~~~G~gV~VgVIDtGid~------~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~ 188 (726)
.++++++ .+|+ .+.+|+||+|||||||||+ .||+|.++ ++..++|.+.
T Consensus 5 ~~~i~~~-~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~------------------------i~~~~~~~~~ 59 (434)
T 1wmd_A 5 RGIVKAD-VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK------------------------ITALYALGRT 59 (434)
T ss_dssp HHHTTHH-HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC------------------------EEEEEETTTT
T ss_pred hhhhCch-hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC------------------------EeeeccccCC
Confidence 4567888 8997 7999999999999999999 79999753 2333444444
Q ss_pred CCCCCCCCCcchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCC---CHHHHHHHHHHHHhCCCeEEEe
Q 040462 189 GTARDKDGHGTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGC---ASTDILAAFDDAIADGVDIITV 265 (726)
Q Consensus 189 ~~~~D~~gHGThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~ai~~A~~~gvdVIn~ 265 (726)
..+.|..||||||||||+|+.. + +.||||+|+|+.+|+++..|. ..+++.++|++|+++|++||||
T Consensus 60 ~~~~d~~gHGT~VAgiiag~g~----------~-~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~~Vin~ 128 (434)
T 1wmd_A 60 NNANDTNGHGTHVAGSVLGNGS----------T-NKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTN 128 (434)
T ss_dssp TCCCCSSSHHHHHHHHHHCCSS----------S-SCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCCcHHHHHHHHHcCCC----------C-ceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCCeEEEe
Confidence 5678899999999999998631 1 389999999999999987663 4578999999999999999999
Q ss_pred ccCCCCCCCccccHHHHHHHHH-HhCCcEEEEecCCCCCCCC--ccccCCCceEEEeeeccCcceeeEEEeCCCceEeee
Q 040462 266 SLGGNIPVDFIKDAIAIGAFHA-MEKGILTLNSAGNSGSNLG--FVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGY 342 (726)
Q Consensus 266 S~G~~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~~--~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~ 342 (726)
|||......+ +....++..+ .++|++||+||||+|.... ..++.++++|+|||++..+.....
T Consensus 129 S~G~~~~~~~--~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~~~------------ 194 (434)
T 1wmd_A 129 SWGAAVNGAY--TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSFGS------------ 194 (434)
T ss_dssp CCCBCCTTCC--CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGGCG------------
T ss_pred cCCCCcCCcC--CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCcccCc------------
Confidence 9998732222 3444555555 5899999999999998643 456789999999998764310000
Q ss_pred eeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeee
Q 040462 343 SINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVV 422 (726)
Q Consensus 343 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~ 422 (726)
T Consensus 195 -------------------------------------------------------------------------------- 194 (434)
T 1wmd_A 195 -------------------------------------------------------------------------------- 194 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCC
Q 040462 423 SLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPI 502 (726)
Q Consensus 423 ~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~ 502 (726)
.....+.++.||++||+. ++++||||+|||++|+++++.....
T Consensus 195 -----------------------------------~~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s~~~~~~~~ 237 (434)
T 1wmd_A 195 -----------------------------------YADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPD 237 (434)
T ss_dssp -----------------------------------GGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTCCG
T ss_pred -----------------------------------ccCCCCccccccCCCCCC--CCCCCceEEcCCCCeEecCCCCCCC
Confidence 001126789999999998 8999999999999999998653210
Q ss_pred CCCCCCccccceeecccccchhHHHHHHHHHHHhhCCCC-----CHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCcc
Q 040462 503 STDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDW-----SPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPV 577 (726)
Q Consensus 503 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~-----sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~ 577 (726)
... .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.. ...+..||||++|+.
T Consensus 238 ~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~---~~~~~~~G~G~vd~~ 313 (434)
T 1wmd_A 238 SSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL---GYPNGNQGWGRVTLD 313 (434)
T ss_dssp GGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS---CSSCTTTTTCBCCHH
T ss_pred ccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC---CCCCccCCcCeEeHH
Confidence 000 00113579999999999999999999999999875 999999999999998643 236789999999999
Q ss_pred ccCCCc
Q 040462 578 KAVNPG 583 (726)
Q Consensus 578 ~A~~~g 583 (726)
+|++..
T Consensus 314 ~a~~~~ 319 (434)
T 1wmd_A 314 KSLNVA 319 (434)
T ss_dssp HHHTCE
T ss_pred Hhcccc
Confidence 999754
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=6.3e-48 Score=405.35 Aligned_cols=235 Identities=27% Similarity=0.351 Sum_probs=202.1
Q ss_pred hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCcchhhh
Q 040462 124 SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHGTHTAS 203 (726)
Q Consensus 124 ~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHGThVAg 203 (726)
.+|..+.+|+||+|+|||||||++||+|.++ ...+++|. .+...+.|..||||||||
T Consensus 20 ~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~------------~~~~~~~~-----------~~~~~~~d~~gHGT~vAg 76 (284)
T 1sh7_A 20 RNYNANFDGFGVTAYVIDTGVNNNHEEFGGR------------SVSGYDFV-----------DNDADSSDCNGHGTHVAG 76 (284)
T ss_dssp SBCCCSCCCTTCEEEEEESCCCTTCTTTTTC------------EEEEEETT-----------TTBSCCCCSSSHHHHHHH
T ss_pred hhhhcCCCCCCCEEEEEcCCCCCCChhHcCC------------cccccccc-----------CCCCCCCCCCCcHHHHHH
Confidence 6899999999999999999999999999864 11222222 223456789999999999
Q ss_pred ccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhC--CCeEEEeccCCCCCCCccccHH
Q 040462 204 TAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIAD--GVDIITVSLGGNIPVDFIKDAI 280 (726)
Q Consensus 204 iaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--gvdVIn~S~G~~~~~~~~~~~~ 280 (726)
||+|+. .||||+|+|+.+|+++..+ ++.+++++||+|++++ +++|||||||.. ....+
T Consensus 77 iia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~-----~~~~~ 137 (284)
T 1sh7_A 77 TIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGG-----QSTAL 137 (284)
T ss_dssp HHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBS-----CCHHH
T ss_pred HHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCC-----CCHHH
Confidence 999873 6899999999999998876 7889999999999984 799999999986 24567
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeEEec
Q 040462 281 AIGAFHAMEKGILTLNSAGNSGSNLG-FVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHG 359 (726)
Q Consensus 281 ~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~ 359 (726)
..++.++.++|++||+||||+|.... .++...|++|+|||++.+
T Consensus 138 ~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------------------- 182 (284)
T 1sh7_A 138 DSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS----------------------------------- 182 (284)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT-----------------------------------
T ss_pred HHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC-----------------------------------
Confidence 77888999999999999999997653 457789999999997643
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHH
Q 040462 360 KEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLIS 439 (726)
Q Consensus 360 ~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~ 439 (726)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceeeccc
Q 040462 440 YKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESG 519 (726)
Q Consensus 440 ~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sG 519 (726)
+.++.||++||.. ||+|||++|+++++.+ .|..++|
T Consensus 183 -----------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~-------------~~~~~sG 218 (284)
T 1sh7_A 183 -----------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWYDG-------------GYKTISG 218 (284)
T ss_dssp -----------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS-------------SEEEECS
T ss_pred -----------------------CCcCcccCCCCcc--------EEEeccCCeEEecCCC-------------CEEEccC
Confidence 4568899999976 9999999999998754 7999999
Q ss_pred ccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCC
Q 040462 520 TSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNS 559 (726)
Q Consensus 520 TSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~ 559 (726)
||||||||||++|||+|++|+|++++||++|++||++..-
T Consensus 219 TS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 258 (284)
T 1sh7_A 219 TSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKV 258 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred hHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCc
Confidence 9999999999999999999999999999999999987643
No 25
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=3.2e-47 Score=455.00 Aligned_cols=399 Identities=21% Similarity=0.224 Sum_probs=261.3
Q ss_pred CcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCC----CCCCCCCCcchhhhccccCc
Q 040462 134 NIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDG----TARDKDGHGTHTASTAAGNE 209 (726)
Q Consensus 134 gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~----~~~D~~gHGThVAgiaag~~ 209 (726)
+|+|||||||++.+|++.... ..|+..-+.+ .| .+.+-+..++.++. ...|++||||||||||||..
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l------~~Y~~~~dyg-~F--~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~ 284 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRI------GEYSRTHETR-NV--DDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNH 284 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEE------ECTTTTCCCC-EE--SSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCC
T ss_pred CEEEEEEeCCCCCCccccccc------cccccccccc-cc--ccccCCCCccCCCCCccccCCCCCCcHHHHHHHHhcCC
Confidence 699999999998776654210 0110000100 11 11222222221111 12578999999999999985
Q ss_pred CCCCccccccCcceeecccCceEEEEEeeCCCC---CCHHHHHHHHHHHHh-----CCCeEEEeccCCCCCCCccccHHH
Q 040462 210 VKDASFYGVGQGTARGGVPSARIAAYKVCNPSG---CASTDILAAFDDAIA-----DGVDIITVSLGGNIPVDFIKDAIA 281 (726)
Q Consensus 210 ~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~A~~-----~gvdVIn~S~G~~~~~~~~~~~~~ 281 (726)
++ ..+.||||+|+|+.+|+++..+ ++..+++.+|.+|++ .|++|||||||... .....+.+.
T Consensus 285 -N~--------~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~-~~~~~~~l~ 354 (1354)
T 3lxu_X 285 -SS--------RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHA-NWSNSGRIG 354 (1354)
T ss_dssp -SS--------SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCC-SCSSCCHHH
T ss_pred -CC--------CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCC-CCCccHHHH
Confidence 21 1238999999999999997653 366788888888888 79999999999973 223346677
Q ss_pred HHHHHHH-hCCcEEEEecCCCCCCCCc--ccc--CCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeE
Q 040462 282 IGAFHAM-EKGILTLNSAGNSGSNLGF--VYS--VAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPL 356 (726)
Q Consensus 282 ~a~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~--~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l 356 (726)
.++.+|. ++|++||+||||+|++..+ .++ .++++|+|||++.+..........
T Consensus 355 ~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~~---------------------- 412 (1354)
T 3lxu_X 355 ELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAMR---------------------- 412 (1354)
T ss_dssp HHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC---------------------------
T ss_pred HHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccccccc----------------------
Confidence 7777876 8999999999999986544 445 389999999987553211100000
Q ss_pred EecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHH
Q 040462 357 VHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNS 436 (726)
Q Consensus 357 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~ 436 (726)
T Consensus 413 -------------------------------------------------------------------------------- 412 (1354)
T 3lxu_X 413 -------------------------------------------------------------------------------- 412 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceee
Q 040462 437 LISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSI 516 (726)
Q Consensus 437 l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~ 516 (726)
....+.++.|||+||+. ++++||||+|||++|+++.... ...|..
T Consensus 413 ----------------------~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~-----------~~~y~~ 457 (1354)
T 3lxu_X 413 ----------------------EKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFT-----------MSKSQL 457 (1354)
T ss_dssp ---------------------------CCCCCCCCSCCS--SSSCCEEEEEEC--------------------------C
T ss_pred ----------------------cCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCC-----------CCceec
Confidence 01125789999999997 8999999999999999875432 137899
Q ss_pred cccccchhHHHHHHHHHHHh----hCCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCccccCCCcccccCChhh
Q 040462 517 ESGTSMACPHAAAVAAYVKS----FHPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPVKAVNPGLIYETSKQD 592 (726)
Q Consensus 517 ~sGTSmAaP~VAG~aALl~~----~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~~A~~~glv~d~~~~d 592 (726)
++|||||||||||++|||++ .+|+|++++||++|++||+++... .++.||+|+||+.+|++..+.|+..+.+
T Consensus 458 ~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~~----~~~~~G~GlLDa~~AV~~a~~~~~~p~~ 533 (1354)
T 3lxu_X 458 MNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGYV----DPFAQGHGLLNVEKAFEHLTEHRQSKDN 533 (1354)
T ss_dssp CCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTTS----CTTTSSSSBCCHHHHHHHHHTTTTCGGG
T ss_pred CCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCCC----CcccccCCEeCHHHHHHHHHhcCCCCcc
Confidence 99999999999999999986 799999999999999999998653 5678999999999999999999999999
Q ss_pred HHHhhhcCCCCc-ceeeeecCCCcccCCCCCCCCCCCCCCceEEEeecCCCCceEEEEEEEEe---ccCC-CeeE--EEE
Q 040462 593 YIKILCSIGYNE-SIVRSISGDNSTCPKGSNKLSAKDLNYPSMAAQVSRAKPFTVNFPRIVTN---VGLA-NSTY--RAK 665 (726)
Q Consensus 593 y~~~lc~~~~~~-~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~rtvtn---vg~~-~~ty--~~~ 665 (726)
|+.|+|..++.. ..|.. ..+ .|.. |+ ...++|+-+..| .... ...+ ++.
T Consensus 534 ~v~f~~~v~~~~~rgIyl--R~~-~~~~------------~~---------~~tv~V~p~f~~~~~~~~~~~i~f~~~l~ 589 (1354)
T 3lxu_X 534 MLRFSVRVGNNADKGIHL--RQG-VQRN------------SI---------DYNVYIEPIFYNDKEADPKDKFNFNVRLN 589 (1354)
T ss_dssp GEEEEEEETTTTBSSEEE--CSS-CCCS------------CE---------EEEEEEEEEESSCSCSSSTTCSCCCCEEE
T ss_pred ceEEEEEecCCCCCceEE--ecc-ccCC------------ce---------EEEEEEeeeecCcccCChhhccceEEEEE
Confidence 999999998633 33321 111 1100 00 012223333321 1111 1111 111
Q ss_pred EEeecceeEEEEe------cceeeEEEEEEeccCCCCCCeEEEEEEEEc-----CCeEEEeeEEEE
Q 040462 666 FFQKFTIISVKVV------PEKKPFVVTVTGKGLPESGTVVPATLVWSD-----GIHSVRSPIVVH 720 (726)
Q Consensus 666 v~~~p~g~~v~v~------p~~~~~~vt~~~~~~~~~~~~~~G~~~~~~-----~~~~vr~p~~~~ 720 (726)
+....+ -|++. -+..+|.|+|+.+.. .....+++|...| .....|+||.|.
T Consensus 590 L~~t~~--wv~~p~~l~l~~~~r~~~v~vDp~~L--~~G~h~~~v~~~D~~~~~~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 590 LIASQP--WVQCGAFLDLSYGTRSIAVRVDPTGL--QPGVHSAVIRAYDTDCVQKGSLFEIPVTVV 651 (1354)
T ss_dssp EEESST--TEEECSCEECTTSCEEEEEEECGGGC--CSEEEEEEEEEEESSCTTSCCSEEEEEEEE
T ss_pred EecCCC--ceecccceeecCCCceEEEEECCCCC--CCcceeEEEEEEEcCCcccCceEEeeEEEE
Confidence 111011 11111 188899999998874 3467899998765 247889999885
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1.5e-47 Score=401.78 Aligned_cols=235 Identities=29% Similarity=0.372 Sum_probs=201.0
Q ss_pred hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCcchhhh
Q 040462 124 SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHGTHTAS 203 (726)
Q Consensus 124 ~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHGThVAg 203 (726)
.+|..+++|+||+|+|||||||++||+|.++ ...+++|. .+...+.|..||||||||
T Consensus 22 ~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~------------~~~~~d~~-----------~~~~~~~d~~gHGT~vAg 78 (278)
T 2b6n_A 22 NNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR------------ASSGYDFI-----------DNDYDATDCNGHGTHVAG 78 (278)
T ss_dssp SEEECSCCCTTCEEEEEESCCCTTCGGGTTC------------EEEEEETT-----------TTBSCCCCSSSHHHHHHH
T ss_pred hhcccCCCCCCCEEEEEeCCCCCCChhHhcc------------cccCeecC-----------CCCCCCCCCCCcHHHHHH
Confidence 6799999999999999999999999999864 22222322 123456789999999999
Q ss_pred ccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHh--CCCeEEEeccCCCCCCCccccHH
Q 040462 204 TAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIA--DGVDIITVSLGGNIPVDFIKDAI 280 (726)
Q Consensus 204 iaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~--~gvdVIn~S~G~~~~~~~~~~~~ 280 (726)
||+|+. .||||+|+|+.+|++++.+ ++.+++++||+|+++ .+++|||||||... ...+
T Consensus 79 iia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~-----~~~~ 139 (278)
T 2b6n_A 79 TIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA-----SQAT 139 (278)
T ss_dssp HHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC-----CHHH
T ss_pred HHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc-----CHHH
Confidence 999862 7899999999999998776 788999999999998 59999999999862 4567
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeEEec
Q 040462 281 AIGAFHAMEKGILTLNSAGNSGSNLG-FVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHG 359 (726)
Q Consensus 281 ~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~ 359 (726)
..++.++.++|++||+||||+|.... ..+...|++|+|||++.+
T Consensus 140 ~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------------------- 184 (278)
T 2b6n_A 140 DDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN----------------------------------- 184 (278)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------------------------------
T ss_pred HHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC-----------------------------------
Confidence 77888999999999999999998654 357788999999997644
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHH
Q 040462 360 KEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLIS 439 (726)
Q Consensus 360 ~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~ 439 (726)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceeeccc
Q 040462 440 YKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESG 519 (726)
Q Consensus 440 ~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sG 519 (726)
+.++.||++||.. ||+|||++|++++... ...|..++|
T Consensus 185 -----------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~-----------~~~~~~~sG 222 (278)
T 2b6n_A 185 -----------------------DSRSSFSNYGTCL--------DIYAPGSSITSSWYTS-----------NSATNTISG 222 (278)
T ss_dssp -----------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTS-----------TTCEEEECS
T ss_pred -----------------------CCcCCcCCCCCCC--------eEEeCCCCeECcccCC-----------CCCEEEeCc
Confidence 4568899999855 9999999999998653 137899999
Q ss_pred ccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccC
Q 040462 520 TSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPM 557 (726)
Q Consensus 520 TSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i 557 (726)
||||||||||++|||+|++|+|++++||++|++||++.
T Consensus 223 TS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 223 TSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 99999999999999999999999999999999999864
No 27
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.6e-47 Score=401.23 Aligned_cols=240 Identities=28% Similarity=0.339 Sum_probs=205.2
Q ss_pred hccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCcchhhhc
Q 040462 125 ITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHGTHTAST 204 (726)
Q Consensus 125 ~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHGThVAgi 204 (726)
.|. ..+|+||+|+|||||||++||+|.++ . ...++|. ..+.|..|||||||||
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~------------~------------~~~~~~~--~~~~d~~gHGT~vAgi 76 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR------------A------------QMVKTYY--YSSRDGNGHGTHCAGT 76 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC------------E------------EEEEESS--SCSSCSSSHHHHHHHH
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc------------c------------ccccCCC--CCCCCCCCCHHHHHHH
Confidence 454 37999999999999999999999864 1 1222332 3467899999999999
Q ss_pred cccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhCCC-------eEEEeccCCCCCCCcc
Q 040462 205 AAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIADGV-------DIITVSLGGNIPVDFI 276 (726)
Q Consensus 205 aag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~gv-------dVIn~S~G~~~~~~~~ 276 (726)
|+|+. .||||+|+|+.+|+++..+ ++.+++++||+|++++++ +|||||||.. .
T Consensus 77 ia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~-----~ 137 (279)
T 2pwa_A 77 VGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG-----Y 137 (279)
T ss_dssp HHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE-----C
T ss_pred HHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCC-----C
Confidence 99862 7999999999999999877 889999999999999987 9999999975 2
Q ss_pred ccHHHHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceee
Q 040462 277 KDAIAIGAFHAMEKGILTLNSAGNSGSNLG-FVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFP 355 (726)
Q Consensus 277 ~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~ 355 (726)
.+.+..++.++.++|++||+||||+|.+.. .++...|++|+|||++.+
T Consensus 138 ~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------------- 186 (279)
T 2pwa_A 138 SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY------------------------------- 186 (279)
T ss_dssp CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------------------------------
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC-------------------------------
Confidence 467778888999999999999999998653 357789999999997644
Q ss_pred EEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHH
Q 040462 356 LVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFN 435 (726)
Q Consensus 356 l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~ 435 (726)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCcccccee
Q 040462 436 SLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYS 515 (726)
Q Consensus 436 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~ 515 (726)
+.++.||++||.. ||+|||++|+++++.+ .|.
T Consensus 187 ---------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~~-------------~~~ 218 (279)
T 2pwa_A 187 ---------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWIGG-------------STR 218 (279)
T ss_dssp ---------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEETTT-------------EEE
T ss_pred ---------------------------CCcCCcCCCCCcc--------eEEEecCCeEEeecCC-------------CEE
Confidence 4568899999965 9999999999998764 799
Q ss_pred ecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCCCCCCcCCCCccCcc
Q 040462 516 IESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSKVNDAEVAFGSGHVNPV 577 (726)
Q Consensus 516 ~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~~~~~~~~~G~G~vn~~ 577 (726)
.++|||||||||||++|||+|+ |++++++||++|++||++... ..+|+|..|+.
T Consensus 219 ~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~-------~~~~~g~~n~l 272 (279)
T 2pwa_A 219 SISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL-------SNIPFGTVNLL 272 (279)
T ss_dssp EECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC-------BSCCTTSCCEE
T ss_pred EcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc-------CCCCCCCccEe
Confidence 9999999999999999999999 999999999999999998533 24788888874
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=3.8e-47 Score=398.75 Aligned_cols=235 Identities=26% Similarity=0.332 Sum_probs=203.5
Q ss_pred hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCcchhhh
Q 040462 124 SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHGTHTAS 203 (726)
Q Consensus 124 ~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHGThVAg 203 (726)
.+|..+.+|+||+|+|||||||++||+|.++ +...+++. ...+.|..||||||||
T Consensus 22 ~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~-~~~~~d~~gHGT~vAg 76 (276)
T 4dzt_A 22 NSYTYTATGRGVNVYVIDTGIRTTHREFGGR------------------------ARVGYDAL-GGNGQDCNGHGTHVAG 76 (276)
T ss_dssp SCEECSCCCTTCEEEEEESCCCTTCGGGTTC------------------------EEEEEETT-SSCSCCSSSHHHHHHH
T ss_pred cceecCCCCCCcEEEEEccCCCCCChhHccC------------------------eeccccCC-CCCCCCCCCCHHHHHH
Confidence 6899999999999999999999999999764 11222222 2456788999999999
Q ss_pred ccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhC--CCeEEEeccCCCCCCCccccHH
Q 040462 204 TAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIAD--GVDIITVSLGGNIPVDFIKDAI 280 (726)
Q Consensus 204 iaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~--gvdVIn~S~G~~~~~~~~~~~~ 280 (726)
||+|.. .||||+|+|+.+|++++.+ .+.++++++++|++++ +++|||||||.. ....+
T Consensus 77 iiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~-----~~~~~ 137 (276)
T 4dzt_A 77 TIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGG-----VSTAL 137 (276)
T ss_dssp HHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEE-----CCHHH
T ss_pred HHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCC-----CCHHH
Confidence 999873 7999999999999998876 8899999999999987 999999999976 24677
Q ss_pred HHHHHHHHhCCcEEEEecCCCCCCCCcc-ccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceeeEEec
Q 040462 281 AIGAFHAMEKGILTLNSAGNSGSNLGFV-YSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFPLVHG 359 (726)
Q Consensus 281 ~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~ 359 (726)
..++.++.++|+++|+||||+|...... +...+++|+|||++.+
T Consensus 138 ~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----------------------------------- 182 (276)
T 4dzt_A 138 DNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS----------------------------------- 182 (276)
T ss_dssp HHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----------------------------------
T ss_pred HHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC-----------------------------------
Confidence 8888899999999999999999875443 7788999999997544
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHHHHHH
Q 040462 360 KEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFNSLIS 439 (726)
Q Consensus 360 ~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~ 439 (726)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccceeeccc
Q 040462 440 YKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYSIESG 519 (726)
Q Consensus 440 ~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sG 519 (726)
+.++.||++||.. ||+|||++|++++.... ..|..++|
T Consensus 183 -----------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~-----------~~~~~~sG 220 (276)
T 4dzt_A 183 -----------------------DARASFSNYGSCV--------DLFAPGASIPSAWYTSD-----------TATQTLNG 220 (276)
T ss_dssp -----------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTSS-----------SCEEEECS
T ss_pred -----------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccCCC-----------CceEEeeE
Confidence 4668899999976 99999999999987541 37999999
Q ss_pred ccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCC
Q 040462 520 TSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNS 559 (726)
Q Consensus 520 TSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~ 559 (726)
||||||||||++|||+|++|++++++||++|++||++...
T Consensus 221 TS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~ 260 (276)
T 4dzt_A 221 TSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRL 260 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCcc
Confidence 9999999999999999999999999999999999998654
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.6e-47 Score=442.98 Aligned_cols=293 Identities=20% Similarity=0.213 Sum_probs=207.5
Q ss_pred cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCC-CCCC
Q 040462 119 MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARD-KDGH 197 (726)
Q Consensus 119 ~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D-~~gH 197 (726)
+++. .+|+.+.+|+||+|||||||||++||+|.++-. ....+|..+. .+..|.| ..||
T Consensus 57 in~~-~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~~-----------~~~~~~~~~~---------~d~~p~d~~~gH 115 (600)
T 2oxa_A 57 LNLW-WAHRTGVLGHGVNVAVVDDGLAIAHPDLADNVR-----------PGSKNVVTGS---------DDPTPTDPDTGH 115 (600)
T ss_dssp CCCH-HHHHTTCSCTTCEEEEESSCCCTTCTTTGGGBC-----------SCCBCTTTCS---------SCCCCCSTTCCH
T ss_pred cChH-HHHhcCCCCCCcEEEEecCCcCCCCcchhhccc-----------cCceeccCCC---------CCCCCCCCCCCC
Confidence 4455 899999999999999999999999999986410 0112332221 1233455 7899
Q ss_pred cchhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCCC--HHHHHHHHHHHHhCCCeEEEeccCCCCCCCc
Q 040462 198 GTHTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGCA--STDILAAFDDAIADGVDIITVSLGGNIPVDF 275 (726)
Q Consensus 198 GThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~~--~~~i~~ai~~A~~~gvdVIn~S~G~~~~~~~ 275 (726)
||||||||||. .++. | +.||||+|+|+.+|+++..+.. ...+++....+..++++|||||||.......
T Consensus 116 GT~vAGiiaa~-~n~~---g-----~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~~~~~~~ 186 (600)
T 2oxa_A 116 GTSVSGIIAAV-DNAI---G-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSYRMSVVDPR 186 (600)
T ss_dssp HHHHHHHHHCC-SSSS---S-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECCCCCCSSCC
T ss_pred ccHHHHHhhcc-cCCC---c-----ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEeccCCCCCcc
Confidence 99999999998 2211 2 2899999999999999887633 2445554445778899999999998732222
Q ss_pred cc----cHHHHHHHH---HHhCCcEEEEecCCCCCCC----------------------CccccCCCceEEEeeeccCcc
Q 040462 276 IK----DAIAIGAFH---AMEKGILTLNSAGNSGSNL----------------------GFVYSVAPWLMSVAASTTDRL 326 (726)
Q Consensus 276 ~~----~~~~~a~~~---a~~~Gi~vV~AAGN~g~~~----------------------~~~~~~~p~vitVgA~~~~~~ 326 (726)
.. ..+..++.. +.++|++||+||||+|... ...++.++|+|+|||++.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA~~~~-- 264 (600)
T 2oxa_A 187 SANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSALNAD-- 264 (600)
T ss_dssp CSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEEECTT--
T ss_pred ccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEecccCC--
Confidence 21 222222222 4578999999999998742 1122345678888876433
Q ss_pred eeeEEEeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCce
Q 040462 327 FVDKVLLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAA 406 (726)
Q Consensus 327 ~~~~~~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~ 406 (726)
T Consensus 265 -------------------------------------------------------------------------------- 264 (600)
T 2oxa_A 265 -------------------------------------------------------------------------------- 264 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceE
Q 040462 407 GSILFNDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDIS 486 (726)
Q Consensus 407 g~i~~~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~ 486 (726)
+.++.||++||+. ||+
T Consensus 265 --------------------------------------------------------g~~a~fS~~G~~v--------dv~ 280 (600)
T 2oxa_A 265 --------------------------------------------------------GVRSSYSSVGSNI--------FLS 280 (600)
T ss_dssp --------------------------------------------------------SSBCTTCCBCTTE--------EEE
T ss_pred --------------------------------------------------------CCcCCcCCCCCCe--------EEE
Confidence 5678999999988 999
Q ss_pred eCCccEEeecCC-------CCCCC--------------CCCCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHH
Q 040462 487 APGVDILAAVSP-------LAPIS--------------TDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSA 545 (726)
Q Consensus 487 APG~~I~sa~~~-------~~~~~--------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~ 545 (726)
|||++|.++.+. ..... ....+.....|..++|||||||||||++|||+|++|+|+|++
T Consensus 281 APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s~~P~lt~~~ 360 (600)
T 2oxa_A 281 ATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRD 360 (600)
T ss_dssp EECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHH
T ss_pred eccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHHhCCCCCHHH
Confidence 999995443221 10000 000011123489999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCC----------------------------CCCCCcCCCCccCccccCCCccccc
Q 040462 546 IRSAIMTTAWPMNSSKV----------------------------NDAEVAFGSGHVNPVKAVNPGLIYE 587 (726)
Q Consensus 546 Ik~~L~~TA~~i~~~~~----------------------------~~~~~~~G~G~vn~~~A~~~glv~d 587 (726)
||++|++||+++..... ...++.||||+||+.+|++...-+.
T Consensus 361 vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 361 LRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp HHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTCC
T ss_pred HHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHhcc
Confidence 99999999998764321 0134789999999999998554443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.3e-46 Score=423.22 Aligned_cols=287 Identities=15% Similarity=0.131 Sum_probs=216.1
Q ss_pred cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCc
Q 040462 119 MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHG 198 (726)
Q Consensus 119 ~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHG 198 (726)
++++ .+|+.+++|+||+|||||||||++||+|.++-. -..+++|..++.- -.+...+.|..|||
T Consensus 25 i~~~-~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~----------~~~~~d~~~~~~~-----p~~~~~~~d~~gHG 88 (471)
T 1p8j_A 25 LNVK-EAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD----------PGASFDVNDQDPD-----PQPRYTQMNDNRHG 88 (471)
T ss_dssp CCCH-HHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC----------GGGCEETTTTBSC-----CCCCCCTTCTTCHH
T ss_pred CChH-HHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC----------ccCcccccCCCCC-----CCCccCCCCCCCcH
Confidence 4556 899999999999999999999999999986410 0112333221100 00011356889999
Q ss_pred chhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCCCHHHHHHHHHHHHh-CCCeEEEeccCCCCCCC---
Q 040462 199 THTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGCASTDILAAFDDAIA-DGVDIITVSLGGNIPVD--- 274 (726)
Q Consensus 199 ThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~-~gvdVIn~S~G~~~~~~--- 274 (726)
|||||||+|...++. | +.||||+|+|+.+|+++ +..+++++|++++++ ++++|||||||......
T Consensus 89 T~vAGiiaa~~~n~~---g-----~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~~~~~ 157 (471)
T 1p8j_A 89 TRCAGEVAAVANNGV---C-----GVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVD 157 (471)
T ss_dssp HHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSSCCB
T ss_pred HHHHHHHHeeccCCC---C-----CEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEeccCcCCCCCccc
Confidence 999999999743221 1 28999999999999986 346789999999999 99999999999863211
Q ss_pred ccccHHHHHHHHHH-----hCCcEEEEecCCCCCCCCc----cccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeec
Q 040462 275 FIKDAIAIGAFHAM-----EKGILTLNSAGNSGSNLGF----VYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSIN 345 (726)
Q Consensus 275 ~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~~----~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~ 345 (726)
.....+..++..+. .+|++||+||||+|..... ....++++|+|||++.+
T Consensus 158 ~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~--------------------- 216 (471)
T 1p8j_A 158 GPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF--------------------- 216 (471)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT---------------------
T ss_pred CcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC---------------------
Confidence 11233444455554 3699999999999976322 22356899999997644
Q ss_pred cCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeee
Q 040462 346 SFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLP 425 (726)
Q Consensus 346 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p 425 (726)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCC
Q 040462 426 AVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTD 505 (726)
Q Consensus 426 ~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~ 505 (726)
+.++.||++||.. ....+|+..+||.+|+++....
T Consensus 217 -------------------------------------g~~a~~S~~g~~~--~~~~~~~~~~~g~~i~st~~~~------ 251 (471)
T 1p8j_A 217 -------------------------------------GNVPWYSEACSST--LATTYSSGNQNEKQIVTTDLRQ------ 251 (471)
T ss_dssp -------------------------------------SCCCTTCCBCTTC--CEEEECCCSTTSCCEEEEETTT------
T ss_pred -------------------------------------CCcccccCCCCcc--eEEeCCCCCCCCCCEEEeeCCC------
Confidence 4568899999987 4445566666678999987643
Q ss_pred CCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCC--------CCCCCCcCCCCccCcc
Q 040462 506 PEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSSK--------VNDAEVAFGSGHVNPV 577 (726)
Q Consensus 506 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~~--------~~~~~~~~G~G~vn~~ 577 (726)
..|..++|||||||||||++|||+|++|+|++++||++|++||+++.... +...+..||+|+||+.
T Consensus 252 ------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~~g~~~~~~~G~G~vda~ 325 (471)
T 1p8j_A 252 ------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAG 325 (471)
T ss_dssp ------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECTTSCEEBTTTBTCBCCHH
T ss_pred ------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecCCCcccCCCCCCEEEcHh
Confidence 36999999999999999999999999999999999999999999876431 1113578999999999
Q ss_pred ccCCCcc
Q 040462 578 KAVNPGL 584 (726)
Q Consensus 578 ~A~~~gl 584 (726)
+|++...
T Consensus 326 ~Av~~a~ 332 (471)
T 1p8j_A 326 AMVALAQ 332 (471)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998543
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=8.1e-46 Score=419.58 Aligned_cols=279 Identities=17% Similarity=0.182 Sum_probs=216.6
Q ss_pred cccchhhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCc
Q 040462 119 MGLNQSITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHG 198 (726)
Q Consensus 119 ~g~~~~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHG 198 (726)
+++. .+|+.+.+|+||+|||||||||++||+|.++- +. ..+++|..++. ......|..|||
T Consensus 41 i~~~-~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~~---~~~~d~~~~~~--------~~~p~~d~~gHG 101 (503)
T 2id4_A 41 INVL-DLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------CA---EGSWDFNDNTN--------LPKPRLSDDYHG 101 (503)
T ss_dssp CCCH-HHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------CG---GGCEETTTTBS--------CCCCCSTTTTHH
T ss_pred cChH-HHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------cc---cCcccCCCCCC--------CCCCCCCCCChH
Confidence 4555 89999999999999999999999999998751 10 11233322210 012235789999
Q ss_pred chhhhccccCcCCCCccccccCcceeecccCceEEEEEeeCCCCCCHHHHHHHHHHHHhCCCeEEEeccCCCCCCC---c
Q 040462 199 THTASTAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSGCASTDILAAFDDAIADGVDIITVSLGGNIPVD---F 275 (726)
Q Consensus 199 ThVAgiaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~~gvdVIn~S~G~~~~~~---~ 275 (726)
|||||||+|...++. | +.||||+|+|+.+|+++.. ++..++++||+|+++++ +|||||||...... .
T Consensus 102 T~vAGiiaa~~~n~~---~-----~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~~~~~~~ 171 (503)
T 2id4_A 102 TRCAGEIAAKKGNNF---C-----GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWGPADDGRHLQG 171 (503)
T ss_dssp HHHHHHHHCCSSSSS---S-----CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEESCCSSSCCBC
T ss_pred HHHHHHHHhccCCCC---C-----cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCCcCCCCccccC
Confidence 999999999753221 1 2899999999999999743 67889999999999998 99999999763211 1
Q ss_pred cccHHHHHHHHHH-----hCCcEEEEecCCCCCCCC--ccc--cCCCceEEEeeeccCcceeeEEEeCCCceEeeeeecc
Q 040462 276 IKDAIAIGAFHAM-----EKGILTLNSAGNSGSNLG--FVY--SVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINS 346 (726)
Q Consensus 276 ~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~--~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~ 346 (726)
....+..++..+. .+|++||+||||+|.... .++ ..++++|+|||++.+
T Consensus 172 ~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~---------------------- 229 (503)
T 2id4_A 172 PSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK---------------------- 229 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT----------------------
T ss_pred chHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC----------------------
Confidence 2244566666665 479999999999997532 222 367889999997644
Q ss_pred CCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeE
Q 040462 347 FAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPA 426 (726)
Q Consensus 347 ~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~ 426 (726)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEe----CCccEEeecCCCCCC
Q 040462 427 VAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISA----PGVDILAAVSPLAPI 502 (726)
Q Consensus 427 ~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~A----PG~~I~sa~~~~~~~ 502 (726)
+.++.||++||.. |++| ||.+|+++....
T Consensus 230 ------------------------------------~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~~~~--- 262 (503)
T 2id4_A 230 ------------------------------------DLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSDING--- 262 (503)
T ss_dssp ------------------------------------SCCCTTCCCCTTE--------EEEEECSBTTBCEEEECSTT---
T ss_pred ------------------------------------CCcCCcCCCCCcc--------eEeecCCCCCCceEeecCCC---
Confidence 4568899999987 8887 899999995433
Q ss_pred CCCCCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccCCCC-C--------CCCCCCcCCCCc
Q 040462 503 STDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPMNSS-K--------VNDAEVAFGSGH 573 (726)
Q Consensus 503 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i~~~-~--------~~~~~~~~G~G~ 573 (726)
..|..++|||||||||||++|||+|++|+|++++||++|+.||+++... . +...+..||+|+
T Consensus 263 ---------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~~g~~~~~~~G~G~ 333 (503)
T 2id4_A 263 ---------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSAMGKKYSHRYGFGK 333 (503)
T ss_dssp ---------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECSSSSEEBTTTBTCB
T ss_pred ---------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecCCCCccCcccCCcE
Confidence 3799999999999999999999999999999999999999999987653 1 112356899999
Q ss_pred cCccccCCCcc
Q 040462 574 VNPVKAVNPGL 584 (726)
Q Consensus 574 vn~~~A~~~gl 584 (726)
||+.+|++...
T Consensus 334 vda~~Av~~a~ 344 (503)
T 2id4_A 334 IDAHKLIEMSK 344 (503)
T ss_dssp CCHHHHHHHHT
T ss_pred ecHHHHHHHHh
Confidence 99999998543
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=5.6e-46 Score=390.46 Aligned_cols=228 Identities=29% Similarity=0.364 Sum_probs=196.0
Q ss_pred hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCcchhhh
Q 040462 124 SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHGTHTAS 203 (726)
Q Consensus 124 ~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHGThVAg 203 (726)
.+|... +|+||+|+|||||||++||+|.++ +...+.|. ....|..||||||||
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~------------------------~~~~~~~~--~~~~d~~gHGT~vAg 76 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR------------------------AKQIKSYA--STARDGHGHGTHCAG 76 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC------------------------EEEEEECS--SSSSCSSSHHHHHHH
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc------------------------cccccCCC--CCCCCCCCcHHHHHH
Confidence 456654 999999999999999999999764 22222332 223388999999999
Q ss_pred ccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhCC-------CeEEEeccCCCCCCCc
Q 040462 204 TAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIADG-------VDIITVSLGGNIPVDF 275 (726)
Q Consensus 204 iaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~g-------vdVIn~S~G~~~~~~~ 275 (726)
||+|+. .||||+|+|+.+|+++..+ ++.++++++++|+++++ ++|||||||..
T Consensus 77 ii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~----- 137 (279)
T 3f7m_A 77 TIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG----- 137 (279)
T ss_dssp HHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE-----
T ss_pred HHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC-----
Confidence 999862 7999999999999998876 88999999999999986 99999999975
Q ss_pred cccHHHHHHHHHHhCCcEEEEecCCCCCCCCcc-ccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCcee
Q 040462 276 IKDAIAIGAFHAMEKGILTLNSAGNSGSNLGFV-YSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKF 354 (726)
Q Consensus 276 ~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~ 354 (726)
....+..++..+.++|++||+||||+|...... +...|++|+|||++.+
T Consensus 138 ~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------------------------ 187 (279)
T 3f7m_A 138 YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN------------------------------ 187 (279)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------------------------
T ss_pred ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC------------------------------
Confidence 456778888899999999999999999875443 6788999999997644
Q ss_pred eEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhH
Q 040462 355 PLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENF 434 (726)
Q Consensus 355 ~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~ 434 (726)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCccccce
Q 040462 435 NSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKY 514 (726)
Q Consensus 435 ~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y 514 (726)
+.++.||++||.. ||+|||++|+++++.+ .|
T Consensus 188 ----------------------------~~~~~~S~~g~~~--------di~ApG~~i~s~~~~~-------------~~ 218 (279)
T 3f7m_A 188 ----------------------------DVRSTFSNYGRVV--------DIFAPGTSITSTWIGG-------------RT 218 (279)
T ss_dssp ----------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECGGG-------------CE
T ss_pred ----------------------------CCCCCCCCCCCCC--------eEEECCCCeEeecCCC-------------CE
Confidence 4568899999965 9999999999998754 68
Q ss_pred eecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccccC
Q 040462 515 SIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWPM 557 (726)
Q Consensus 515 ~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~i 557 (726)
..++|||||||||||++|||+|++|. ++++||++|++||++.
T Consensus 219 ~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~ 260 (279)
T 3f7m_A 219 NTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKN 260 (279)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEES
T ss_pred EEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccc
Confidence 99999999999999999999999999 9999999999999874
No 33
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=2.4e-45 Score=409.48 Aligned_cols=245 Identities=20% Similarity=0.267 Sum_probs=189.5
Q ss_pred hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCCCcccCCceeeeeeecCCCCCCCCCCCCcchhhh
Q 040462 124 SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGGKNFTCNNKLIGARYYTTDGTARDKDGHGTHTAS 203 (726)
Q Consensus 124 ~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g~~f~~n~klig~~~~~~~~~~~D~~gHGThVAg 203 (726)
..|..+.+|+||+|+|||||||++||+|.++-. +. +.++..+. ....| ...+.|..||||||||
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~~------~~-----~~~~v~~~---dg~~f--~~~~~D~~GHGThVAG 80 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-----DFENVPEE---DGTRF--HRQASKCDSHGTHLAG 80 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTEE------EE-----EEECCCCC---C---------CTTTTHHHHHHHH
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHccccc------cc-----CcccccCC---CCccc--cCCCCCCCChHHHHHH
Confidence 378888999999999999999999999986510 00 00000000 00000 1345788999999999
Q ss_pred ccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHHHHHHhC------CCeEEEeccCCCCCCCcc
Q 040462 204 TAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAFDDAIAD------GVDIITVSLGGNIPVDFI 276 (726)
Q Consensus 204 iaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~A~~~------gvdVIn~S~G~~~~~~~~ 276 (726)
||+|+. .||||+|+|+.+|+++..| ++.+++++||+|++++ +++|||||||+. .
T Consensus 81 IIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~-----~ 141 (546)
T 2qtw_B 81 VVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG-----Y 141 (546)
T ss_dssp HHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEE-----C
T ss_pred HHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCC-----C
Confidence 999873 7899999999999998877 7889999999999984 999999999975 2
Q ss_pred ccHHHHHHHHHHhCCcEEEEecCCCCCCCC-ccccCCCceEEEeeeccCcceeeEEEeCCCceEeeeeeccCCCCCceee
Q 040462 277 KDAIAIGAFHAMEKGILTLNSAGNSGSNLG-FVYSVAPWLMSVAASTTDRLFVDKVLLGNGATLSGYSINSFAMKGKKFP 355 (726)
Q Consensus 277 ~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~~g~g~~~~g~~~~~~~~~~~~~~ 355 (726)
...+..++.++.++|++||+||||+|.+.. .+++..|++|+|||++.+....
T Consensus 142 s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~a--------------------------- 194 (546)
T 2qtw_B 142 SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQPV--------------------------- 194 (546)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCBC---------------------------
T ss_pred cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCcc---------------------------
Confidence 467777888999999999999999998653 3477899999999986552100
Q ss_pred EEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEEecCCCCceeeeeeeEEEeehhhHH
Q 040462 356 LVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILFNDQYEKVSFVVSLPAVAVSMENFN 435 (726)
Q Consensus 356 l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~p~~~i~~~~~~ 435 (726)
T Consensus 195 -------------------------------------------------------------------------------- 194 (546)
T 2qtw_B 195 -------------------------------------------------------------------------------- 194 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCCCCCCCCCCCcccccee
Q 040462 436 SLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPLAPISTDPEDKRRVKYS 515 (726)
Q Consensus 436 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~ 515 (726)
..-..||++||. |||+|||++|+++++... ..|.
T Consensus 195 ---------------------------~~s~~fSn~G~~--------vDI~APG~~I~St~~~~~-----------~~y~ 228 (546)
T 2qtw_B 195 ---------------------------TLGTLGTNFGRC--------VDLFAPGEDIIGASSDCS-----------TCFV 228 (546)
T ss_dssp ---------------------------EETTEECCBSTT--------CCEEEECSSEEEECTTST-----------TCEE
T ss_pred ---------------------------cccCCcCCCCCc--------ceEEecCccEEeeccCCC-----------CcEe
Confidence 001238999984 599999999999987541 3699
Q ss_pred ecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhcccc
Q 040462 516 IESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAWP 556 (726)
Q Consensus 516 ~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~ 556 (726)
.++|||||||||||++|||+|++|+|+|+|||++|++||.+
T Consensus 229 ~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~ 269 (546)
T 2qtw_B 229 SQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAK 269 (546)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEE
T ss_pred eeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999964
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=2.7e-43 Score=408.94 Aligned_cols=286 Identities=19% Similarity=0.236 Sum_probs=197.9
Q ss_pred hhccCCCCCCCcEEEEEcccCCCCCCCCCCCCCCCCCCCccccccCC-CcccCCceeeeeeecCCCCCCCCCCCCcchhh
Q 040462 124 SITRKHSVESNIIIGVIDSGIWPESESFSDEGFGPAPKKWKGACNGG-KNFTCNNKLIGARYYTTDGTARDKDGHGTHTA 202 (726)
Q Consensus 124 ~~w~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~~~g~~~~g-~~f~~n~klig~~~~~~~~~~~D~~gHGThVA 202 (726)
.+|+.+++|+||+|||||||||++||||.++ ...+ ++|..+. .+.....|++|||||||
T Consensus 61 ~aw~~g~tG~GV~VaViDtGid~~HpDL~~n------------~~~~~~~~~~~~--------~dp~p~~~~~gHGThVA 120 (600)
T 3hjr_A 61 WAHRTGVLGQGVNVAVVDDGLAIAHPDLADN------------VRPGSKNVVTGS--------DDPTPTDPDTAHGTSVS 120 (600)
T ss_dssp HHHHHTCSCTTCEEEEESSCCCTTCTTTGGG------------BCSCCBCTTTSS--------SCCCCCSTTCCHHHHHH
T ss_pred HHHHcCCCCCCeEEEEEcCCCCCCChhHhhc------------cccCcceeecCC--------CCCCCCCCCCChHHHHH
Confidence 7999999999999999999999999999865 1111 1221111 01123346789999999
Q ss_pred hccccCcCCCCccccccCcceeecccCceEEEEEeeCCCC-CCHHHHHHHH-HHHHhCCCeEEEeccCCCCCCCccc---
Q 040462 203 STAAGNEVKDASFYGVGQGTARGGVPSARIAAYKVCNPSG-CASTDILAAF-DDAIADGVDIITVSLGGNIPVDFIK--- 277 (726)
Q Consensus 203 giaag~~~~~~~~~G~~~G~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~A~~~gvdVIn~S~G~~~~~~~~~--- 277 (726)
|||||.. +- .| +.||||+|+|+.+|++++.+ +..++++.|+ +++..++++|||+|||.........
T Consensus 121 GiIAa~~----n~----~g-~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~~~~~~~~~~ 191 (600)
T 3hjr_A 121 GIIAAVD----NA----IG-TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMSVVDPRSANSL 191 (600)
T ss_dssp HHHHCCS----SS----SS-CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCCCSSCCCSCSH
T ss_pred HHHhEeC----CC----CC-cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCccccCCccCCcc
Confidence 9999862 11 22 28999999999999998876 6777777766 6788889999999999763222221
Q ss_pred --cHHHHHHHHH--HhCCcEEEEecCCCCCCCC----------------------ccccCCCceEEEeeeccCcceeeEE
Q 040462 278 --DAIAIGAFHA--MEKGILTLNSAGNSGSNLG----------------------FVYSVAPWLMSVAASTTDRLFVDKV 331 (726)
Q Consensus 278 --~~~~~a~~~a--~~~Gi~vV~AAGN~g~~~~----------------------~~~~~~p~vitVgA~~~~~~~~~~~ 331 (726)
..+..++..+ ..+|+++|+||||.+.... ..+...+++|+|||++.+
T Consensus 192 ~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~~~IsVgA~~~~------- 264 (600)
T 3hjr_A 192 DQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSALNAD------- 264 (600)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSSSEEEEEEECTT-------
T ss_pred hhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccCcceEEeeecCC-------
Confidence 2222222222 2689999999999764210 011233444555544322
Q ss_pred EeCCCceEeeeeeccCCCCCceeeEEecCCCCCCCCcCCCCCCCCCCCCCCCccceEEEEEecchhHHHHhcCceEEEEE
Q 040462 332 LLGNGATLSGYSINSFAMKGKKFPLVHGKEVSESCPEFSSQACNPGCINSSLVKGKIVMCSKFDGYTEVHKVGAAGSILF 411 (726)
Q Consensus 332 ~~g~g~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~~~~~~~~~~~Ga~g~i~~ 411 (726)
T Consensus 265 -------------------------------------------------------------------------------- 264 (600)
T 3hjr_A 265 -------------------------------------------------------------------------------- 264 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCceeeeeeeEEEeehhhHHHHHHHHhcCCCCeEEEeeeeeecCCCCCcccccCCCCCCCCCCCCcCCceEeCCcc
Q 040462 412 NDQYEKVSFVVSLPAVAVSMENFNSLISYKNSTKKPEAEILKTEAIKDFDAPVVAPFSSRGPNAILPDILKPDISAPGVD 491 (726)
Q Consensus 412 ~~~~~~~~~~~~~p~~~i~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~ 491 (726)
+.++.||++|+.. +++|||.+
T Consensus 265 ---------------------------------------------------g~~a~yS~~G~~v--------~~~apg~~ 285 (600)
T 3hjr_A 265 ---------------------------------------------------GVRSSYSSVGSNI--------FLSATGGE 285 (600)
T ss_dssp ---------------------------------------------------SSBCTTCCBCTTC--------CEEEECCS
T ss_pred ---------------------------------------------------CCEeecccCCcce--------eeccCCCC
Confidence 5678899999987 89999876
Q ss_pred E-------Eee-cCCCCCC-------------CCCCCCccccceeecccccchhHHHHHHHHHHHhhCCCCCHHHHHHHH
Q 040462 492 I-------LAA-VSPLAPI-------------STDPEDKRRVKYSIESGTSMACPHAAAVAAYVKSFHPDWSPSAIRSAI 550 (726)
Q Consensus 492 I-------~sa-~~~~~~~-------------~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L 550 (726)
+ ... .+..... ...........|..++|||||||||||++|||+|+||+||++|||++|
T Consensus 286 ~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L 365 (600)
T 3hjr_A 286 YGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLL 365 (600)
T ss_dssp CSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHH
T ss_pred CCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHH
Confidence 2 222 1111000 000111223568899999999999999999999999999999999999
Q ss_pred HhccccCCCCCCC-------------------------C---CCCcCCCCccCccccCCCcc
Q 040462 551 MTTAWPMNSSKVN-------------------------D---AEVAFGSGHVNPVKAVNPGL 584 (726)
Q Consensus 551 ~~TA~~i~~~~~~-------------------------~---~~~~~G~G~vn~~~A~~~gl 584 (726)
++||+++.....| + ....||+|+||+.+|++...
T Consensus 366 ~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 366 ARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAA 427 (600)
T ss_dssp HHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHT
T ss_pred HhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHhh
Confidence 9999987653211 0 24579999999999987433
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=1.1e-25 Score=255.68 Aligned_cols=98 Identities=23% Similarity=0.290 Sum_probs=79.3
Q ss_pred eeecccCceEEEEEeeCCCCCCHHHHHHHHHHHHh---CCCeEEEeccCCCCCC--CccccHHHHHHHHHHhCCcEEEEe
Q 040462 223 ARGGVPSARIAAYKVCNPSGCASTDILAAFDDAIA---DGVDIITVSLGGNIPV--DFIKDAIAIGAFHAMEKGILTLNS 297 (726)
Q Consensus 223 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~---~gvdVIn~S~G~~~~~--~~~~~~~~~a~~~a~~~Gi~vV~A 297 (726)
+.||||+|+|+.|++. ...++++++|+||++ ++++|||+|||..... ......+..++..|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4899999999999984 256789999999998 7999999999986211 112346677777888999999999
Q ss_pred cCCCCCCC--------CccccCCCceEEEeeeccC
Q 040462 298 AGNSGSNL--------GFVYSVAPWLMSVAASTTD 324 (726)
Q Consensus 298 AGN~g~~~--------~~~~~~~p~vitVgA~~~~ 324 (726)
|||+|... ..+++.+||+++||+++..
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 99999653 3466789999999998754
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=3.5e-22 Score=216.31 Aligned_cols=101 Identities=20% Similarity=0.155 Sum_probs=82.3
Q ss_pred eecccCceEEEEEeeCCCCCCHHHHHHHHHHHHh-CCCeEEEeccCCCCC---CCccccHHHHHHHHHHhCCcEEEEecC
Q 040462 224 RGGVPSARIAAYKVCNPSGCASTDILAAFDDAIA-DGVDIITVSLGGNIP---VDFIKDAIAIGAFHAMEKGILTLNSAG 299 (726)
Q Consensus 224 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~~-~gvdVIn~S~G~~~~---~~~~~~~~~~a~~~a~~~Gi~vV~AAG 299 (726)
..+||+++++.|++.+..+++.++++++|+||++ ++++|||+|||.... ...+.+.+..++..|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4478999999999987655778899999999998 899999999998621 112335677778888899999999999
Q ss_pred CCCCCCC-------------ccccCCCceEEEeeeccC
Q 040462 300 NSGSNLG-------------FVYSVAPWLMSVAASTTD 324 (726)
Q Consensus 300 N~g~~~~-------------~~~~~~p~vitVgA~~~~ 324 (726)
|+|...+ .+++.+||+++||+++..
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 9997542 456789999999998754
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.97 E-value=6.3e-10 Score=99.35 Aligned_cols=79 Identities=8% Similarity=0.059 Sum_probs=65.6
Q ss_pred CCCcEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCHHHHHHHHcCCCeEEEEeCceec
Q 040462 30 DDRKVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTDLERQKLASMEEVVSVFPSRTLQ 109 (726)
Q Consensus 30 ~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~ 109 (726)
..++.|||+|++... ......|++|+.+.+.+ ...+.+++|+|++.|+||+++|+++++++|+++|+|.+|+||+.++
T Consensus 35 ~ip~~YIV~lk~~~~-~~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~ 112 (114)
T 2w2n_P 35 RLPGTYVVVLKEETH-LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVF 112 (114)
T ss_dssp EEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEE
T ss_pred CCCCcEEEEECCCCC-HHHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEe
Confidence 357899999998765 34455778888776654 3356799999999999999999999999999999999999999876
Q ss_pred c
Q 040462 110 F 110 (726)
Q Consensus 110 ~ 110 (726)
.
T Consensus 113 ~ 113 (114)
T 2w2n_P 113 A 113 (114)
T ss_dssp E
T ss_pred c
Confidence 4
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.95 E-value=1.3e-09 Score=122.83 Aligned_cols=99 Identities=14% Similarity=0.134 Sum_probs=63.2
Q ss_pred ecccCceEEEEEeeCCCCCCHHHHHHHHHHHH--hCCCeEEEeccCCCCC--CCccccHHHHHHHHHHhCCcEEEEecCC
Q 040462 225 GGVPSARIAAYKVCNPSGCASTDILAAFDDAI--ADGVDIITVSLGGNIP--VDFIKDAIAIGAFHAMEKGILTLNSAGN 300 (726)
Q Consensus 225 GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~A~--~~gvdVIn~S~G~~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN 300 (726)
++++...++.|...+. ....+.++..+++.. .+-++|||+|||.... ...+.+.+...+..+..+||.|++|+||
T Consensus 263 a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD 341 (544)
T 3edy_A 263 SAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 341 (544)
T ss_dssp HHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred ccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCC
Confidence 3445555555533211 112233444444433 2468999999998721 1122345566666888999999999999
Q ss_pred CCCCC----------CccccCCCceEEEeeeccC
Q 040462 301 SGSNL----------GFVYSVAPWLMSVAASTTD 324 (726)
Q Consensus 301 ~g~~~----------~~~~~~~p~vitVgA~~~~ 324 (726)
+|... ..+++..|||++||+++..
T Consensus 342 ~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l~ 375 (544)
T 3edy_A 342 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSFQ 375 (544)
T ss_dssp STTBCEEETTEEECCCEETTTCTTSEEEEEEEES
T ss_pred CCccccCCCCCccccCCCcCCCCcEEEEeeeecc
Confidence 99743 2456789999999998753
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.90 E-value=5e-09 Score=87.46 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=58.0
Q ss_pred CCCcEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCHHHHHHHHcCCCeEEEEeCceec
Q 040462 30 DDRKVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTDLERQKLASMEEVVSVFPSRTLQ 109 (726)
Q Consensus 30 ~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~ 109 (726)
..++.|||.|++.... ...+..+++. .+.++.++|++ |+||+++|+++++++|+++|+|.+|||+..++
T Consensus 6 ~i~~~YIV~~k~~~~~----~~~~~~~~~~------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~ 74 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFKS----CAKKEDVISE------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYR 74 (80)
T ss_dssp --CCEEEEEECTTCCS----HHHHHHHHHT------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEE
T ss_pred cCCCCEEEEECCCCCh----HHHHHHHHHH------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEE
Confidence 4578999999987652 2223333322 24689999998 99999999999999999999999999999999
Q ss_pred cccCC
Q 040462 110 FHTTR 114 (726)
Q Consensus 110 ~~~~~ 114 (726)
++++.
T Consensus 75 ~~tt~ 79 (80)
T 3cnq_P 75 ALSAT 79 (80)
T ss_dssp ECCC-
T ss_pred Eeeec
Confidence 88764
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.67 E-value=2.7e-08 Score=89.79 Aligned_cols=78 Identities=8% Similarity=0.061 Sum_probs=59.9
Q ss_pred CCcEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCHHHHHHHHcCCCeEEEEeCceecc
Q 040462 31 DRKVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTDLERQKLASMEEVVSVFPSRTLQF 110 (726)
Q Consensus 31 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~~ 110 (726)
.++.|||.|++... ......|.+++.+.+.. ...+.++.|+|++.|+||+++|++++++.|+++|+|.+|+++..++.
T Consensus 46 Ip~~YIV~~K~~~~-~~~~~~~~~~l~~~~~~-r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 46 LPGTYVVVLKEETH-LSQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp EEEEEEEEECTTCC-HHHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred CCCCEEEEECCCCC-HHHHHHHHHHHHHHHhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 47899999998765 23333444444332221 22356899999999999999999999999999999999999988764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.45 E-value=4.1e-07 Score=74.86 Aligned_cols=70 Identities=17% Similarity=0.236 Sum_probs=54.3
Q ss_pred cEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEee-cceeeEEEEEeCHHHHHHHHcC--CCeEEEEeCceec
Q 040462 33 KVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSY-RRSFNGFAAKLTDLERQKLASM--EEVVSVFPSRTLQ 109 (726)
Q Consensus 33 ~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y-~~~~~g~s~~l~~~~~~~L~~~--p~V~~v~~~~~~~ 109 (726)
+.|||.|++... ......+..++ +.. +.++.+.| ...|+||++++++++++.|+++ |.|.+||+|..++
T Consensus 3 ~sYIV~lk~~~~-~~~~~~~~~~~-~~~------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~ 74 (76)
T 1v5i_B 3 GKFIVIFKNDVS-EDKIRETKDEV-IAE------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAH 74 (76)
T ss_dssp EEEEEEECTTCC-HHHHHHHHHHH-HHH------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEE
T ss_pred ceEEEEECCCCC-HHHHHHHHHHH-Hhh------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEe
Confidence 689999998754 23333344333 322 24789999 4899999999999999999999 8999999999876
Q ss_pred c
Q 040462 110 F 110 (726)
Q Consensus 110 ~ 110 (726)
.
T Consensus 75 ~ 75 (76)
T 1v5i_B 75 A 75 (76)
T ss_dssp C
T ss_pred C
Confidence 4
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=97.45 E-value=0.00045 Score=66.78 Aligned_cols=82 Identities=16% Similarity=0.147 Sum_probs=64.3
Q ss_pred CCCCCCCCCCCCCC-------ccceEEEEEe------cchhHHHHhcCceEEEEEecCCC-Cc------eeeeeeeEEEe
Q 040462 370 SSQACNPGCINSSL-------VKGKIVMCSK------FDGYTEVHKVGAAGSILFNDQYE-KV------SFVVSLPAVAV 429 (726)
Q Consensus 370 ~~~~c~~~~~~~~~-------~~gkiv~~~~------~~~~~~~~~~Ga~g~i~~~~~~~-~~------~~~~~~p~~~i 429 (726)
....|.+....... .+|||+|++| .+|..+++++||.++|++|+... .. .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 45789876543222 4789999998 36889999999999999997521 11 11246999999
Q ss_pred ehhhHHHHHHHHhcCCCCeEEE
Q 040462 430 SMENFNSLISYKNSTKKPEAEI 451 (726)
Q Consensus 430 ~~~~~~~l~~~~~~~~~~~~~i 451 (726)
+..+|+.|++.+..+...+++|
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti 183 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVI 183 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEE
Confidence 9999999999999998888888
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.12 E-value=0.0006 Score=53.89 Aligned_cols=62 Identities=16% Similarity=0.090 Sum_probs=49.5
Q ss_pred cEEEEEeCCCCCCCCcchhHHHHHHHHhhcCCCCCCcEEEeecceeeEEEEEeCHHHHHHHHcCCCeEEEEeCceec
Q 040462 33 KVYIVYIGSLPKGEYVTSSHHQSILQEVVEGSSVGDVLVRSYRRSFNGFAAKLTDLERQKLASMEEVVSVFPSRTLQ 109 (726)
Q Consensus 33 ~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~ 109 (726)
.+|||.+++.... . + .....+.++.+.| ..+++++++||++.++.|+++|+|++|++|...+
T Consensus 2 ~~~IV~f~~~~~~-~----------~---~i~~~gG~i~~~~-~~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 2 IRVIVSVDKAKFN-P----------H---EVLGIGGHIVYQF-KLIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp EEEEEEECGGGCC-G----------G---GGGGGTCEEEEEC-SSSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred eeEEEEEcCcchh-H----------H---HHHHCCCEEEEEe-cCCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 4799999874220 0 0 1233467999999 7899999999999999999999999999998765
No 44
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=91.89 E-value=0.3 Score=53.64 Aligned_cols=71 Identities=18% Similarity=0.196 Sum_probs=53.8
Q ss_pred CCCccceEEEEEecc--------------h----hHHHHhcCceEEEEEecCCCCc--------e---eeeeeeEEEeeh
Q 040462 381 SSLVKGKIVMCSKFD--------------G----YTEVHKVGAAGSILFNDQYEKV--------S---FVVSLPAVAVSM 431 (726)
Q Consensus 381 ~~~~~gkiv~~~~~~--------------~----~~~~~~~Ga~g~i~~~~~~~~~--------~---~~~~~p~~~i~~ 431 (726)
+.+++|||||+++.. | ..++.++||+|+|++++..... . ....+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 468999999998721 1 2468899999999998643210 0 124689999999
Q ss_pred hhHHHHHHHHhcCCCCeEEE
Q 040462 432 ENFNSLISYKNSTKKPEAEI 451 (726)
Q Consensus 432 ~~~~~l~~~~~~~~~~~~~i 451 (726)
++++.|+..+..+...++++
T Consensus 204 ~da~~L~~~l~~g~~~~v~l 223 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISL 223 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEE
Confidence 99999999998876666666
No 45
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=90.61 E-value=0.4 Score=52.16 Aligned_cols=61 Identities=21% Similarity=0.289 Sum_probs=50.0
Q ss_pred CCccceEEEEEe-----cchhHHHHhcCceEEEEEecCCCCce------eeeeeeEEEeehhhHHHHHHHHh
Q 040462 382 SLVKGKIVMCSK-----FDGYTEVHKVGAAGSILFNDQYEKVS------FVVSLPAVAVSMENFNSLISYKN 442 (726)
Q Consensus 382 ~~~~gkiv~~~~-----~~~~~~~~~~Ga~g~i~~~~~~~~~~------~~~~~p~~~i~~~~~~~l~~~~~ 442 (726)
.+++||||++.+ ..|..++.++||.|+|++++...... ....+|.+.|+.++++.|+..+.
T Consensus 111 ~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 111 KDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 479999999986 56889999999999999998642211 12468999999999999999984
No 46
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=86.30 E-value=0.32 Score=59.59 Aligned_cols=25 Identities=20% Similarity=0.413 Sum_probs=23.0
Q ss_pred CCCCCCcEEEEEcccCCCCCCCCCC
Q 040462 129 HSVESNIIIGVIDSGIWPESESFSD 153 (726)
Q Consensus 129 ~~~G~gV~VgVIDtGid~~Hp~f~~ 153 (726)
.+.|+||+|||+|||||+.+|-|.-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 5899999999999999999999963
No 47
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=82.70 E-value=0.98 Score=51.72 Aligned_cols=61 Identities=18% Similarity=0.360 Sum_probs=48.3
Q ss_pred CCccceEEEEEe-----cchhHHHHhcCceEEEEEecCCCC-c-----------------ee------------------
Q 040462 382 SLVKGKIVMCSK-----FDGYTEVHKVGAAGSILFNDQYEK-V-----------------SF------------------ 420 (726)
Q Consensus 382 ~~~~gkiv~~~~-----~~~~~~~~~~Ga~g~i~~~~~~~~-~-----------------~~------------------ 420 (726)
.+++|||||+.+ ..|..++.++||+|+|++++.... . +.
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 479999999987 568899999999999999875321 0 00
Q ss_pred -eeeeeEEEeehhhHHHHHHHHh
Q 040462 421 -VVSLPAVAVSMENFNSLISYKN 442 (726)
Q Consensus 421 -~~~~p~~~i~~~~~~~l~~~~~ 442 (726)
.-.||++.|+.++++.|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 1258999999999999998765
No 48
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=82.17 E-value=1.1 Score=51.89 Aligned_cols=63 Identities=21% Similarity=0.296 Sum_probs=49.7
Q ss_pred CCCccceEEEEEe-----cchhHHHHhcCceEEEEEecCCC-------------------------------Cce-----
Q 040462 381 SSLVKGKIVMCSK-----FDGYTEVHKVGAAGSILFNDQYE-------------------------------KVS----- 419 (726)
Q Consensus 381 ~~~~~gkiv~~~~-----~~~~~~~~~~Ga~g~i~~~~~~~-------------------------------~~~----- 419 (726)
..+++|||||+.+ .+|..+++++||+|+|++++... +.+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 3479999999997 67899999999999999986320 000
Q ss_pred ---------------eeeeeeEEEeehhhHHHHHHHHhc
Q 040462 420 ---------------FVVSLPAVAVSMENFNSLISYKNS 443 (726)
Q Consensus 420 ---------------~~~~~p~~~i~~~~~~~l~~~~~~ 443 (726)
..-.||++-|+..+++.|+..++.
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 013689999999999999998764
No 49
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=80.88 E-value=1 Score=49.19 Aligned_cols=31 Identities=32% Similarity=0.346 Sum_probs=26.4
Q ss_pred CCCcccccCCCCCCCCCCCCcCCceEeCCccEEeecCCC
Q 040462 461 DAPVVAPFSSRGPNAILPDILKPDISAPGVDILAAVSPL 499 (726)
Q Consensus 461 ~~~~~a~fSs~GP~~~~~~~lKPDI~APG~~I~sa~~~~ 499 (726)
....++.||++||.. ||+|||++|+++++.+
T Consensus 182 ~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 182 SNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp TTCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 346789999999866 9999999999998743
No 50
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.96 E-value=6.1 Score=34.56 Aligned_cols=68 Identities=15% Similarity=0.075 Sum_probs=42.9
Q ss_pred eEEEEEEEEeccCCCeeEEEEEEeecce---eEEEEec-ceeeEEEEEEeccCCCCCCeEEEEEEEE-cCCeEEEeeE
Q 040462 645 TVNFPRIVTNVGLANSTYRAKFFQKFTI---ISVKVVP-EKKPFVVTVTGKGLPESGTVVPATLVWS-DGIHSVRSPI 717 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~ty~~~v~~~p~g---~~v~v~p-~~~~~~vt~~~~~~~~~~~~~~G~~~~~-~~~~~vr~p~ 717 (726)
+.+.+.+++|+|+.+..|+..... |=. ..-++.| ++..++|+|..... ....+.|... |+...+.+++
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~~~~-~F~i~P~~g~L~pg~~~~i~V~F~P~~~----g~~~~~l~v~~~~g~~~~v~L 114 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIKTCR-PFSIEPAIGTLNVGESMQLEVEFEPQSV----GDHSGRLIVCYDTGEKVFVSL 114 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEECCT-TEEEESSEEEECTTCEEEEEEEECCSSS----BCCCCBCEEEESSSCEECCEE
T ss_pred eEEEEEEEEECCCCCEEEEEecCC-CeEEECCcCEECCCCEEEEEEEEEcCCC----ccEEEEEEEEECCCCEEEEEE
Confidence 677888999999988888877643 211 0223333 89999999988642 3344554443 5555544443
No 51
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=61.64 E-value=23 Score=30.65 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=37.8
Q ss_pred eEEEEEEEEeccCCCeeEEEEEEeecceeE------EEEec-ceeeEEEEEEecc
Q 040462 645 TVNFPRIVTNVGLANSTYRAKFFQKFTIIS------VKVVP-EKKPFVVTVTGKG 692 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~ty~~~v~~~p~g~~------v~v~p-~~~~~~vt~~~~~ 692 (726)
.-..+..+.|....+.+|+++++. ++|++ |+|.| +..++.|.|....
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g-~~~l~~~g~~~i~v~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKG-LNDVSWYGKQTIQVEPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEES-CSSCEEESCCEEEECTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEECCCCCEEEEEEEeC-CcccEEeCCCcEEECCCCEEEEEEEEEECh
Confidence 455677999999999999999998 66654 67778 7788888888754
No 52
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=38.75 E-value=1.8e+02 Score=24.49 Aligned_cols=64 Identities=14% Similarity=0.187 Sum_probs=49.0
Q ss_pred eEEEeecCCCCceEEEEEEEEeccCCCeeEEEEEEeecceeEEEEec-ceeeEEEEEEeccCCCCCCeEEEEEE
Q 040462 633 SMAAQVSRAKPFTVNFPRIVTNVGLANSTYRAKFFQKFTIISVKVVP-EKKPFVVTVTGKGLPESGTVVPATLV 705 (726)
Q Consensus 633 s~~~~~~~~~~~~~~~~rtvtnvg~~~~ty~~~v~~~p~g~~v~v~p-~~~~~~vt~~~~~~~~~~~~~~G~~~ 705 (726)
.+++.+... ...++.||+|...+...|.-.... |.-+.+.+.- ++-.|+|.+.... .|..|..+
T Consensus 35 vlsV~F~~~---~~~vTItItNe~TG~~VYs~~~s~-p~~i~IdLnge~sG~Y~IeI~~~~-----~~LtG~F~ 99 (101)
T 3sd2_A 35 ILNVSFGRA---KDYAIITVTNKATGEIVHSKTYHN-TSIVMIDMSSCEKGEYTIHIILND-----CLLEGTFT 99 (101)
T ss_dssp EEEEEESSC---CSCEEEEEEETTTCCEEEEEEESS-CSEEEEECTTSCSEEEEEEEEETT-----EEEEEEEE
T ss_pred EEEEEeccC---CCcEEEEEEECCCCcEEEEEeccC-CcEEEEEcCCCcCceEEEEEEeCC-----cEEEEEEE
Confidence 788888763 567899999987677899998887 7766666665 7889999888753 56677654
No 53
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=35.32 E-value=24 Score=26.71 Aligned_cols=35 Identities=14% Similarity=0.147 Sum_probs=26.6
Q ss_pred cchhHHHHHHHHHHHhhCCCCCHHHHHHHHHhccc
Q 040462 521 SMACPHAAAVAAYVKSFHPDWSPSAIRSAIMTTAW 555 (726)
Q Consensus 521 SmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~ 555 (726)
|-..|..--....|++.+|+++...|+..|...-.
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 33344445567789999999999999999987543
No 54
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=35.13 E-value=58 Score=37.65 Aligned_cols=66 Identities=12% Similarity=0.109 Sum_probs=42.6
Q ss_pred CCCCCCceEEEeecCC--CCceEEEEEEEEeccCCCeeEEEE--EEeecc-----------ee-EE-EEec-ceeeEEEE
Q 040462 626 AKDLNYPSMAAQVSRA--KPFTVNFPRIVTNVGLANSTYRAK--FFQKFT-----------II-SV-KVVP-EKKPFVVT 687 (726)
Q Consensus 626 ~~~ln~ps~~~~~~~~--~~~~~~~~rtvtnvg~~~~ty~~~--v~~~p~-----------g~-~v-~v~p-~~~~~~vt 687 (726)
..-|-|-+|....+.- .....+++.+|||+|+.+..-.+- +.. |. |+ +| .+.| |+++++++
T Consensus 595 G~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~-~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~ 673 (721)
T 2x41_A 595 GYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKA-PKGKIDKPFQELKAFHKTRLLNPGESEEVVLE 673 (721)
T ss_dssp TCCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEEC-CCSSSCCCSCEEEEEEECCCBCTTCEEEEEEE
T ss_pred CCCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEcc-CCCCCCCchHHhhcccccccCCCCCeEEEEEE
Confidence 4556777776665431 113689999999999865433332 333 32 22 56 6788 99999888
Q ss_pred EEecc
Q 040462 688 VTGKG 692 (726)
Q Consensus 688 ~~~~~ 692 (726)
++...
T Consensus 674 l~~~~ 678 (721)
T 2x41_A 674 IPVRD 678 (721)
T ss_dssp EEGGG
T ss_pred ECHHH
Confidence 88764
No 55
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=34.67 E-value=82 Score=36.32 Aligned_cols=47 Identities=9% Similarity=0.099 Sum_probs=33.6
Q ss_pred eEEEEEEEEeccCCCeeEEEEE--Eeecc-----------e-eEEEEec-ceeeEEEEEEecc
Q 040462 645 TVNFPRIVTNVGLANSTYRAKF--FQKFT-----------I-ISVKVVP-EKKPFVVTVTGKG 692 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~ty~~~v--~~~p~-----------g-~~v~v~p-~~~~~~vt~~~~~ 692 (726)
..+++.+|||+|+.+..-.+-+ .. |. | -+|.+.| |+++++++++...
T Consensus 614 ~~~vsv~VtNtG~~~G~EVvQlYv~~-~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 614 VATVTVDIANSGQVTGAEVAQLYITY-PSSAPRTPPKQLRGFAKLNLTPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEC-CTTSSSCCSCEEEEEEEEEECTTCEEEEEEEEEGGG
T ss_pred eEEEEEEEEeCCCCccceeeeeeeec-CCCCCCchhHHhhhcccceeCCCCeEEEEEEEcHHH
Confidence 5789999999998765444333 33 32 2 2788888 9999999888754
No 56
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.91 E-value=33 Score=28.92 Aligned_cols=59 Identities=10% Similarity=0.102 Sum_probs=37.4
Q ss_pred eEEEEEEEEeccCCCeeEEEEEEeecceeEEEEec--------ceeeEEEEEEeccCCCCCCeEEEEEEEE
Q 040462 645 TVNFPRIVTNVGLANSTYRAKFFQKFTIISVKVVP--------EKKPFVVTVTGKGLPESGTVVPATLVWS 707 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~ty~~~v~~~p~g~~v~v~p--------~~~~~~vt~~~~~~~~~~~~~~G~~~~~ 707 (726)
..+.+.+++|.|+.+..|+......+.+...++.| +++.++|+|..... +.+ .=.+++.
T Consensus 27 ~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~~~~~---g~f-~~~i~v~ 93 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEPSGVQAIQISFSSIIL---GNF-EEEFLVN 93 (112)
T ss_dssp CEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECTTBCCEEEEEECCCCC---EEE-EEEECEE
T ss_pred EEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECCCCEEEEEEEEECCCc---ceE-EEEEEEE
Confidence 56677899999999999988432101222233344 88899999888642 333 3346664
No 57
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=32.66 E-value=64 Score=26.98 Aligned_cols=41 Identities=17% Similarity=0.180 Sum_probs=27.7
Q ss_pred eEEEEEEEEeccCCCee----EE-----------------EEEEeecceeEEEEec-ceeeEEE
Q 040462 645 TVNFPRIVTNVGLANST----YR-----------------AKFFQKFTIISVKVVP-EKKPFVV 686 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~t----y~-----------------~~v~~~p~g~~v~v~p-~~~~~~v 686 (726)
..+++.+|+|.|+.+-. |+ -...- |.|.+|..+| |++++++
T Consensus 19 r~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdI-pAGTavRFEPG~~r~V~L 81 (101)
T 4ep8_B 19 RATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNI-PAGTAVRFEPGQKREVEL 81 (101)
T ss_dssp CCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECS-STTCEEEECTTCEEEEEE
T ss_pred CCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecc-cCCCeEeeCCCCeEEEEE
Confidence 56788899999986522 11 11222 8899999999 6666554
No 58
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=31.06 E-value=1.9e+02 Score=23.47 Aligned_cols=66 Identities=9% Similarity=0.042 Sum_probs=43.9
Q ss_pred EEEeccCCCeeEEEEEEeecceeEEEEec-ceeeEEEEEEeccCCCCCCeEEEEEEEEcCCeEEEeeEEEEee
Q 040462 651 IVTNVGLANSTYRAKFFQKFTIISVKVVP-EKKPFVVTVTGKGLPESGTVVPATLVWSDGIHSVRSPIVVHTQ 722 (726)
Q Consensus 651 tvtnvg~~~~ty~~~v~~~p~g~~v~v~p-~~~~~~vt~~~~~~~~~~~~~~G~~~~~~~~~~vr~p~~~~~~ 722 (726)
+|+-.+......++.++. |.++.+.+.- +.-+|+|+++... .+.|. =.+.| +++|.-.||+.+...
T Consensus 28 ~v~t~dag~~~l~v~v~~-p~~~~~~v~d~~dGty~v~Y~p~~---~G~y~-i~V~~-~g~~I~gSPF~v~v~ 94 (97)
T 2bp3_A 28 TVNTKDAGEGGLSLAIEG-PSKAEISCTDNQDGTCSVSYLPVL---PGDYS-ILVKY-NEQHVPGSPFTARVT 94 (97)
T ss_dssp EEECTTCCSEEEEEEEEE-SSCCEEEEEECSSSEEEEEEECSS---CEEEE-EEEEE-TTEECTTCSEEEEEE
T ss_pred EEEECCCCCCcEEEEEEC-CCCCEEEEEECCCCEEEEEEEeCC---CCcEE-EEEEE-CCEECCCcCEEEEEe
Confidence 344444445678888888 9888777766 6678999888753 23322 12233 578888899988864
No 59
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=30.27 E-value=1.2e+02 Score=35.65 Aligned_cols=168 Identities=15% Similarity=0.106 Sum_probs=92.1
Q ss_pred ceeecccccchhHHHHHHHHHHHhhCCCCC-HHHHHHHHHhccccCCCC--CCCC----CCCcCCCCccCccccCCCc-c
Q 040462 513 KYSIESGTSMACPHAAAVAAYVKSFHPDWS-PSAIRSAIMTTAWPMNSS--KVND----AEVAFGSGHVNPVKAVNPG-L 584 (726)
Q Consensus 513 ~y~~~sGTSmAaP~VAG~aALl~~~~P~~s-p~~Ik~~L~~TA~~i~~~--~~~~----~~~~~G~G~vn~~~A~~~g-l 584 (726)
-...++|..++-|-+.-+.|+|..++|.-- ...|-++|.--..|-... .-|. .|..+-+.. +.+ .
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~p~~~~d~P~~~~~~~-------~~g~~ 690 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFKLQDNPAFLNFKT-------EFGRV 690 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCBCSSGGGSTTTTSCSC-------BTTEE
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceeeeCchhhCCccccCCC-------CCCce
Confidence 456778888888888888899999998765 677888887766542221 0000 011111110 011 1
Q ss_pred cccCCh-hhHHHhhhcCCCCcceeeeecCCCcccCCCCCCCCCCCCCCceEEEe--ecCCCCceEEEEEEEEecc-CCCe
Q 040462 585 IYETSK-QDYIKILCSIGYNESIVRSISGDNSTCPKGSNKLSAKDLNYPSMAAQ--VSRAKPFTVNFPRIVTNVG-LANS 660 (726)
Q Consensus 585 v~d~~~-~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ln~ps~~~~--~~~~~~~~~~~~rtvtnvg-~~~~ 660 (726)
.|.... -+|--|.-. .+. +.-+...-|-|-+|... ++.-.....+++.+|||+| +.+.
T Consensus 691 ~y~eg~~vgYR~y~~~----------------~~~--plfPFG~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G 752 (845)
T 3abz_A 691 IYGEDIFVGYRYYEKL----------------QRK--VAFPFGYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAG 752 (845)
T ss_dssp ECTTTTCCTHHHHHHH----------------TCC--CSBCTTCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCE
T ss_pred eccCCccCCCcchhcC----------------CCc--eeecccCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCc
Confidence 232211 123322210 000 02333567888888877 5541123689999999999 7554
Q ss_pred eEEEE--EEeecc-----------e-eEEEEec-ceeeEEEEEE-eccCC----CCCCeE--EEEEEE
Q 040462 661 TYRAK--FFQKFT-----------I-ISVKVVP-EKKPFVVTVT-GKGLP----ESGTVV--PATLVW 706 (726)
Q Consensus 661 ty~~~--v~~~p~-----------g-~~v~v~p-~~~~~~vt~~-~~~~~----~~~~~~--~G~~~~ 706 (726)
.-.+- +.. |. | -+|.+.| |+++++++++ ..... ....|+ -|.+..
T Consensus 753 ~eVvQlYv~~-~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~l~~~d~~~~~~~~e~G~y~v 819 (845)
T 3abz_A 753 SEVVQVYFSA-LNSKVSRPVKELKGFEKVHLEPGEKKTVNIDLELKDAISYFNEELGKWHVEAGEYLV 819 (845)
T ss_dssp EEEEEEEEEE-SSCSSCCCSCEEEEEEEEEECTTCEEEEEEEEEHHHHHCEEETTTTEEEECSEEEEE
T ss_pred ceeeeeeEeC-CCCCcchhhheeccceeEEECCCCEEEEEEEeCChHHeeEEecCCCeEEEcCCEEEE
Confidence 43333 233 32 2 2678888 8898888888 44211 123454 377654
No 60
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.00 E-value=1.2e+02 Score=25.39 Aligned_cols=62 Identities=10% Similarity=0.070 Sum_probs=42.8
Q ss_pred CCeeEEEEEEeecceeEEEEec-ceeeEEEEEEeccCCCCCCeEEEEEEEEcCCeEEEeeEEEEeecCC
Q 040462 658 ANSTYRAKFFQKFTIISVKVVP-EKKPFVVTVTGKGLPESGTVVPATLVWSDGIHSVRSPIVVHTQQGQ 725 (726)
Q Consensus 658 ~~~ty~~~v~~~p~g~~v~v~p-~~~~~~vt~~~~~~~~~~~~~~G~~~~~~~~~~vr~p~~~~~~~~~ 725 (726)
.....++.++. |.+..+.+.- ..-+|+|+.+... .+.|. =.+.| +++|.-.||+.|.....+
T Consensus 40 g~~~l~v~v~~-p~~~~v~v~d~~dGty~v~Y~p~~---~G~y~-I~V~~-~g~~I~gSPF~v~v~~~~ 102 (105)
T 2ee6_A 40 GAGGLSIAVEG-PSKAEITFDDHKNGSCGVSYIAQE---PGNYE-VSIKF-NDEHIPESPYLVPVIAPS 102 (105)
T ss_dssp CCCCEEEEEES-SSCEEEEECCCCSSCCCEEEEESS---CEEEE-EEEEE-TTEECTTCSEEEEEECCC
T ss_pred CCCcEEEEEEC-CCCCEEEEEECCCCEEEEEEEECC---CceEE-EEEEE-CCEECCCcCEEEEEcCCC
Confidence 34568888988 9998887766 6677888888753 23332 12222 578888899999877654
No 61
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=27.38 E-value=1.6e+02 Score=23.94 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=40.8
Q ss_pred CCeeEEEEEEeecceeEEEEec-ceeeEEEEEEeccCCCCCCeEEEEEEEEcCCeEEEeeEEEEeec
Q 040462 658 ANSTYRAKFFQKFTIISVKVVP-EKKPFVVTVTGKGLPESGTVVPATLVWSDGIHSVRSPIVVHTQQ 723 (726)
Q Consensus 658 ~~~ty~~~v~~~p~g~~v~v~p-~~~~~~vt~~~~~~~~~~~~~~G~~~~~~~~~~vr~p~~~~~~~ 723 (726)
.....++.++. |.++.+.+.- +.-+|+|+++... .+.|. =.+.| +++|.--||+.|...+
T Consensus 32 g~~~~~v~v~g-p~~~~~~v~d~~dGty~v~Y~p~~---~G~y~-I~V~~-~g~~I~gSPF~v~v~~ 92 (94)
T 2w0p_A 32 GAGGLAIAVEG-PSKAEISFEDRKDGSCGVAYVVQE---PGDYE-VSVKF-NEEHIPDSPFVVPVAS 92 (94)
T ss_dssp CSCCEEEEEEE-SSCCEEEEEECTTSCEEEEEECSS---CEEEE-EEEEE-TTEECTTCSEEEEEEC
T ss_pred CCCcEEEEEEC-CCCCeEEEEECCCCEEEEEEEECC---CceEE-EEEEE-CCEECCCCCEEEEEeC
Confidence 34557888888 8888777776 6778888888753 23321 12222 5788888999888754
No 62
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=26.38 E-value=3e+02 Score=23.36 Aligned_cols=67 Identities=10% Similarity=0.040 Sum_probs=46.2
Q ss_pred EEEeccCCCeeEEEEEEeecceeEEEEec-ceeeEEEEEEeccCCCCCCeEEEEEEEEcCCeEEEeeEEEEeec
Q 040462 651 IVTNVGLANSTYRAKFFQKFTIISVKVVP-EKKPFVVTVTGKGLPESGTVVPATLVWSDGIHSVRSPIVVHTQQ 723 (726)
Q Consensus 651 tvtnvg~~~~ty~~~v~~~p~g~~v~v~p-~~~~~~vt~~~~~~~~~~~~~~G~~~~~~~~~~vr~p~~~~~~~ 723 (726)
+|+-.+......++.++. |.++.+.+.- ..-+|+|+.+... .+.|.- .+.| +++|.--||+.+....
T Consensus 40 ~v~t~dag~~~l~v~v~~-p~~~~~~v~d~~dGty~v~Y~p~~---~G~y~I-~V~~-~g~~I~gSPF~v~v~~ 107 (119)
T 2k9u_A 40 SIWTREAGAGGLSIAVEG-PSKAEIAFEDRKDGSCGVSYVVQE---PGDYEV-SIKF-NDEHIPDSPFVVPVAS 107 (119)
T ss_dssp EEECCSSCSEEEEEEEES-SSCCEEEEECCSSSEEEEEEECCS---SEEEEE-EEEE-TSCBCSSCSEEEEEES
T ss_pred EEEECCCCCCcEEEEEeC-CCCCeEEEEECCCCEEEEEEEECC---CceEEE-EEEE-CCEECCCCCEEEEEec
Confidence 444444445778888988 9888777776 7778999888753 233322 3333 5789999999998764
No 63
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=22.80 E-value=58 Score=29.75 Aligned_cols=31 Identities=10% Similarity=0.005 Sum_probs=26.4
Q ss_pred cccccchhHHHHHHHHHHHhhCCCCCHHHHHH
Q 040462 517 ESGTSMACPHAAAVAAYVKSFHPDWSPSAIRS 548 (726)
Q Consensus 517 ~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~ 548 (726)
+.|-| =|+.|-|.+|||.+.+-..+|++|.+
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 44555 37999999999999999999999875
No 64
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=22.15 E-value=1e+02 Score=26.89 Aligned_cols=41 Identities=12% Similarity=0.021 Sum_probs=27.6
Q ss_pred eEEEEEEEEeccCCCee----EEE-----------------EEEeecceeEEEEec-ceeeEEE
Q 040462 645 TVNFPRIVTNVGLANST----YRA-----------------KFFQKFTIISVKVVP-EKKPFVV 686 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~t----y~~-----------------~v~~~p~g~~v~v~p-~~~~~~v 686 (726)
..+++.+|+|.|+.+-. |+. ...- |.|.+|..+| +++++++
T Consensus 25 r~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdI-pAGTavRFEPG~~k~V~L 87 (126)
T 4ubp_B 25 REKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNI-PSGTAARFEPGEEMEVEL 87 (126)
T ss_dssp SCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECS-CTTCEEEECTTCEEEEEE
T ss_pred CcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccc-cCCCeEeeCCCCeEEEEE
Confidence 46788899999987521 221 1222 8899999999 6666554
No 65
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=22.15 E-value=1e+02 Score=26.89 Aligned_cols=41 Identities=12% Similarity=0.021 Sum_probs=27.6
Q ss_pred eEEEEEEEEeccCCCee----EEE-----------------EEEeecceeEEEEec-ceeeEEE
Q 040462 645 TVNFPRIVTNVGLANST----YRA-----------------KFFQKFTIISVKVVP-EKKPFVV 686 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~t----y~~-----------------~v~~~p~g~~v~v~p-~~~~~~v 686 (726)
..+++.+|+|.|+.+-. |+. ...- |.|.+|..+| +++++++
T Consensus 25 r~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdI-pAGTavRFEPG~~k~V~L 87 (126)
T 4ac7_B 25 REKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNI-PSGTAARFEPGEEMEVEL 87 (126)
T ss_dssp SCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECS-CTTCEEEECTTCEEEEEE
T ss_pred CcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccc-cCCCeEeeCCCCeEEEEE
Confidence 46788899999987521 221 1222 8899999999 6666554
No 66
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=20.59 E-value=5.4e+02 Score=24.27 Aligned_cols=73 Identities=10% Similarity=0.023 Sum_probs=47.1
Q ss_pred eEEEEEEEEeccCCCeeEEEEEEeecceeE-----EEEec-ceeeEEEEEEeccCCCCCCeEEEEEEEE--c---CC-eE
Q 040462 645 TVNFPRIVTNVGLANSTYRAKFFQKFTIIS-----VKVVP-EKKPFVVTVTGKGLPESGTVVPATLVWS--D---GI-HS 712 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~ty~~~v~~~p~g~~-----v~v~p-~~~~~~vt~~~~~~~~~~~~~~G~~~~~--~---~~-~~ 712 (726)
..+.+.+++|.|+.+-+++.. .. |.-++ -++.| ++.+++|++..... ..-....++|+.. + ++ ..
T Consensus 20 ~~~~~~~i~N~g~~pl~i~~~-~~-p~~~~~~~~~~~I~PG~~g~I~vt~~~~~~-~~~G~~~~~i~v~~~~~~~~~~~~ 96 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVAVV-SL-PSFVSLDDRAFRLQAREPRELNLSLAVPRN-MPPGMKDEPLVLEVTSPETGKKAV 96 (220)
T ss_dssp CCEEEEEEEECSSSCEEEEEE-EC-CTTEECSCCEEEECSSSCEEEEEEECCCTT-CCSEEEEEEEEEEEECTTTCCEEE
T ss_pred cceEEEEEEeCCCCceEEEec-cC-CCceEeeeCcceeCCCCceEEEEEEcchhc-ccCCceeeEEEEEEEcCCCCcccc
Confidence 455677899999988777764 33 66677 55666 88889998887653 2223455667664 3 33 34
Q ss_pred EEeeEEEE
Q 040462 713 VRSPIVVH 720 (726)
Q Consensus 713 vr~p~~~~ 720 (726)
.++||...
T Consensus 97 ~~i~v~g~ 104 (220)
T 2qsv_A 97 DSVMVSLP 104 (220)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEE
Confidence 46665553
No 67
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=20.57 E-value=3.4e+02 Score=23.83 Aligned_cols=79 Identities=11% Similarity=-0.030 Sum_probs=48.4
Q ss_pred eEEEEEEEEeccCCCeeEEEEEEee---cceeEEEEec--------ceeeEEEEEEeccCC-----CCCCeEEEEEEEE-
Q 040462 645 TVNFPRIVTNVGLANSTYRAKFFQK---FTIISVKVVP--------EKKPFVVTVTGKGLP-----ESGTVVPATLVWS- 707 (726)
Q Consensus 645 ~~~~~rtvtnvg~~~~ty~~~v~~~---p~g~~v~v~p--------~~~~~~vt~~~~~~~-----~~~~~~~G~~~~~- 707 (726)
..+-+.|++|+|.-+.+|++..... ...--.+|.| ++..++|++...... ....-...-|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~V 123 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYVSKDSVTILNSGEDKIEDILVLHL 123 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEEccCcccccccchhhhheeEEEEe
Confidence 4566779999999999999985310 0011234455 888888888753210 0112345567765
Q ss_pred cCCeEEEeeEEEEeec
Q 040462 708 DGIHSVRSPIVVHTQQ 723 (726)
Q Consensus 708 ~~~~~vr~p~~~~~~~ 723 (726)
++.....+||-..+.+
T Consensus 124 e~G~d~fI~v~g~~~p 139 (140)
T 3qbt_B 124 DRGKDYFLTISGNYLP 139 (140)
T ss_dssp TTSCEEEEEEEEEECC
T ss_pred ecCCcEEEEEeccccC
Confidence 6666678888776654
Done!