Query         040465
Match_columns 594
No_of_seqs    283 out of 1898
Neff          6.9 
Searched_HMMs 46136
Date          Fri Mar 29 08:44:17 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040465.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040465hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN03151 cation/calcium exchan 100.0 3.2E-97  7E-102  827.8  47.4  532   57-593    90-646 (650)
  2 KOG2399 K+-dependent Na+:Ca2+  100.0 2.2E-84 4.8E-89  712.8  34.3  526   55-590    49-604 (605)
  3 KOG1307 K+-dependent Ca2+/Na+  100.0 1.5E-60 3.2E-65  493.5  17.8  415  107-592    57-583 (588)
  4 TIGR00927 2A1904 K+-dependent  100.0 3.1E-58 6.8E-63  512.0  28.7  415  106-592   456-1091(1096)
  5 PRK10734 putative calcium/sodi 100.0 4.1E-41 8.8E-46  352.6  33.1  312  111-584     5-317 (325)
  6 COG0530 ECM27 Ca2+/Na+ antipor 100.0 1.1E-40 2.3E-45  347.4  34.3  308  111-585    12-319 (320)
  7 TIGR00367 K+-dependent Na+/Ca+ 100.0   3E-40 6.4E-45  344.6  31.6  301  113-579     6-307 (307)
  8 TIGR00846 caca2 calcium/proton 100.0 2.8E-31   6E-36  282.8  30.0  304  117-581    43-362 (365)
  9 TIGR00378 cax calcium/proton e 100.0   1E-30 2.2E-35  277.1  30.9  300  123-581    30-346 (349)
 10 TIGR00845 caca sodium/calcium  100.0 4.2E-30   9E-35  292.7  25.4  155  103-259    71-251 (928)
 11 KOG1397 Ca2+/H+ antiporter VCX  99.8 8.9E-18 1.9E-22  173.2  26.6  312  116-580    99-430 (441)
 12 PRK10734 putative calcium/sodi  99.8 1.4E-18 3.1E-23  182.5  16.4  141  111-256   176-318 (325)
 13 TIGR00367 K+-dependent Na+/Ca+  99.8 1.2E-18 2.7E-23  182.1  14.8  135  111-250   172-307 (307)
 14 COG0530 ECM27 Ca2+/Na+ antipor  99.7 2.7E-17 5.8E-22  172.0  15.1  142  109-255   175-318 (320)
 15 PF01699 Na_Ca_ex:  Sodium/calc  99.7 9.6E-18 2.1E-22  154.6  10.1  130  123-253     4-139 (140)
 16 KOG1306 Ca2+/Na+ exchanger NCX  99.7 2.2E-17 4.7E-22  174.2   8.8  155  433-590   429-595 (596)
 17 PF01699 Na_Ca_ex:  Sodium/calc  99.7 6.2E-17 1.3E-21  149.2   9.0  136  440-582     1-139 (140)
 18 COG0387 ChaA Ca2+/H+ antiporte  99.7 6.4E-14 1.4E-18  146.0  30.7  305  125-584    49-365 (368)
 19 TIGR00846 caca2 calcium/proton  99.7 4.4E-16 9.6E-21  166.3  15.0  140  110-253   222-363 (365)
 20 TIGR00927 2A1904 K+-dependent   99.6 9.5E-15 2.1E-19  165.2  13.4  136  440-586   469-605 (1096)
 21 TIGR00378 cax calcium/proton e  99.6 4.1E-14 8.8E-19  150.5  14.7  138  111-252   207-346 (349)
 22 PRK10599 calcium/sodium:proton  99.5 1.8E-11 3.9E-16  129.3  27.8  299  125-584    53-365 (366)
 23 TIGR00845 caca sodium/calcium   99.5 3.3E-13 7.1E-18  155.3  14.8  145  105-257   757-920 (928)
 24 KOG1307 K+-dependent Ca2+/Na+   99.5   2E-13 4.3E-18  143.6  10.0  145  104-257   426-577 (588)
 25 PLN03151 cation/calcium exchan  99.4 2.1E-12 4.5E-17  146.1  16.3  134  443-586   156-290 (650)
 26 PRK10599 calcium/sodium:proton  99.0 3.6E-09 7.9E-14  112.0  14.6  140  111-255   224-365 (366)
 27 KOG2399 K+-dependent Na+:Ca2+   98.8 3.4E-08 7.3E-13  110.6  13.8  131  124-255   461-598 (605)
 28 COG0387 ChaA Ca2+/H+ antiporte  98.8 8.2E-08 1.8E-12  100.8  14.8  144  109-256   221-366 (368)
 29 KOG1397 Ca2+/H+ antiporter VCX  98.8 2.9E-08 6.3E-13  103.5  11.2  150  103-256   284-435 (441)
 30 KOG1306 Ca2+/Na+ exchanger NCX  98.7 8.4E-09 1.8E-13  109.9   5.3  157   93-257   414-591 (596)
 31 PRK15086 ethanolamine utilizat  25.8 1.1E+02  0.0023   33.1   4.9   57  104-160   237-293 (372)
 32 PF04346 EutH:  Ethanolamine ut  25.3 1.2E+02  0.0027   32.5   5.3   58  104-161   235-292 (354)
 33 PRK13875 conjugal transfer pro  23.1 7.7E+02   0.017   27.4  10.9  102  108-228   144-250 (440)

No 1  
>PLN03151 cation/calcium exchanger; Provisional
Probab=100.00  E-value=3.2e-97  Score=827.78  Aligned_cols=532  Identities=48%  Similarity=0.876  Sum_probs=435.3

Q ss_pred             CCCCcccccccccccccccccccccCCCCCcccccceeeecccCCCchHHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHH
Q 040465           57 IGDGCAGLHDYSDYKSRCKYVTTHVDCQPKGYINYLQIFYCTCGQFPILGHLVLLLWLVVLFYLLGNTAASYFCSSLESL  136 (594)
Q Consensus        57 ~~~~C~~~~~~~~~~~rC~~V~~~~~C~~~g~~~Yl~l~yC~~~~~~~~~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~i  136 (594)
                      ++.+|+.++...++++||+|+|+|++|+++||+||++++||+++..+.+.++++.+|++++|++||.+|+|||||+++.+
T Consensus        90 ~~~~C~~~~~~~~~~~rC~~v~~~~~C~~~~~~~Y~~~~yC~~~~~~~l~~~~l~~~l~~lF~~L~~ta~dyF~p~l~~I  169 (650)
T PLN03151         90 SPVLCSGLHEHEGYADQCEFLKAHPICSSGGFFDYLKFFYCSCEDFRILGYAVLGVWLVALFYLLGNTAADYFCCSLEKL  169 (650)
T ss_pred             CCCChhhHhhcCCchhcCcchhccCCCCCCCeecceeEEEecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence            34579999887778999999999999988899999999999998777888888899999999999999999999999999


Q ss_pred             HHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHHHHHHhhhccCceeeeCCchHHHHH
Q 040465          137 SRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIVVGVISILTSRKEFSVDKPSFIRDV  216 (594)
Q Consensus       137 s~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv~G~~~l~~~~~~~~v~~~~~~rd~  216 (594)
                      |++||+||++||+|++|+|||+||++++++|+..++++++++|+++||++||+++++|+++++...+|++++++++.||+
T Consensus       170 s~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~~l~ig~ilGs~lf~~~vV~G~v~l~~~~~pf~v~~~~f~RD~  249 (650)
T PLN03151        170 SKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAGEVGLNSVLGGAVFVTCVVVGIVSLCVADKEVQIDKRCFIRDL  249 (650)
T ss_pred             HHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCCceeeehhhhHHHHHHHHHHHHHHHhccCCceeecchhHHHhH
Confidence            99999999999999999999999999999997654678999999999999999999999999854468999999999999


Q ss_pred             HHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHhHhhhhccccccccCCCCCCCccc---cccccccccccc
Q 040465          217 LFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVSASYIYQRSRDRKMSLFAGSPVSDSLF---LHIQDDFEERAV  293 (594)
Q Consensus       217 ~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~---~~~~~~~~~~~~  293 (594)
                      .||++++.++.+++.+|++++|||++|+++|++|+++++.+++.++++++.+ .+...+..++..   .+..++......
T Consensus       250 ~F~lla~~~l~~~l~~g~v~~~eai~ll~lY~~Yv~vv~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (650)
T PLN03151        250 CFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVAANEILRKHARRLK-LDVVTPLLPVQGSIFSPSVEEDESMYS  328 (650)
T ss_pred             HHHHHHHHHHHHHHHcCeEhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhh-hhhcccccccccccccccchhhhhhhh
Confidence            9999999988888899999999999999999999999988876544322211 111111000000   000000000111


Q ss_pred             CccccCCCCCCCCC-----------cCCCCCC--------CChhh-Hhhhhc--cCCcchhhhhhHHHHhhhcccccccc
Q 040465          294 PLIGCVDDEKPNHP-----------VEKNNLQ--------EDPEQ-QCLRFF--NLDSSFCYYFTKLLIVLELPLYLPRR  351 (594)
Q Consensus       294 pll~~~~~~~~~~~-----------~~~~e~~--------~~~~~-~~~~~~--~~~~~~~~~~~k~~~i~~~P~~l~~~  351 (594)
                      |+++..++++.+..           +.+.+.+        ++++. ..++++  ++.... ..++|++.++++|+.+++|
T Consensus       329 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~e~~~~~-~~~~ki~~ll~~Pl~lll~  407 (650)
T PLN03151        329 PLLESDTESDVPRLQTSLPQWMWASNVAIYSNHFAKGSVHDEERPPWGWTDEGAEVESSL-FSCSKLFSLLEMPLTIPRR  407 (650)
T ss_pred             hhhcccccccchhhccccccccccccccccccchhhhhhhhccccccccCchhhhhhcch-hHHHHHHHHHHhHHHHHHH
Confidence            22221111000000           0000000        00000 000000  000000 0147999999999999999


Q ss_pred             ccccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccchhh
Q 040465          352 LTIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPNKCLLPWL  431 (594)
Q Consensus       352 ltIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~~~~~~~  431 (594)
                      +|||++|+++|||+++|+|++++|+++.+++..+...  .....+++|.+++++|+++++++|+||++|+||+||...|.
T Consensus       408 LTIP~vd~~~WsK~l~~~q~~l~P~l~~~~~~~~~~~--~~~~~~~vw~~~~~ig~~Lai~vf~~tr~d~PP~~~~~~~~  485 (650)
T PLN03151        408 LTIPIVEEDRWSKTYAVASASLAPVLLAFLWSSQDDV--SLQARIAAYFIGVAIGSTLGFLAYKYTEPDRPPRRFLIPWV  485 (650)
T ss_pred             hcCCCCCcccCCHHHHHHHHHHHHHHHHHHHhhcccc--ccccchHHHHHHHHHHHHHHHHHHHHcCCCCCChhhhHHHH
Confidence            9999999999999999999999999999987654331  12345788888899999999999999999999999988899


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHHH
Q 040465          432 AGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFNT  511 (594)
Q Consensus       432 ~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn~  511 (594)
                      ++||++|++||+.+|+|+++.++.+|.++|+|++++|+|++|||||+||+++|+++||||+|++ +||++||+|||+||+
T Consensus       486 ~~~f~~Si~wi~~~a~elv~~l~~iG~i~~is~~~lglTvlA~gnsi~Dlian~~lA~~G~~~m-~mA~~a~~ggp~F~i  564 (650)
T PLN03151        486 LGGFIMSIVWFYMIANELVALLVAFGVIFGINPSILGLTVLAWGNSMGDLMSNVALAMNGGDGV-QIAMSGCYAGPMFNT  564 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccHHHHHHHHHHHHcCCchh-HHHHHHhhhhhHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999855 789999999999999


Q ss_pred             HHHHHHHHHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHHHHHhccc
Q 040465          512 LVGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRLASAFGFL  591 (594)
Q Consensus       512 l~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~il~e~~v~  591 (594)
                      ++|+|++++++++..++.++.++.++.+..+.++++.+|+|+++++|.+|||++|..|++++++|++|++++++.|+|++
T Consensus       565 l~glG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~~~R~~G~~li~~Y~~Fl~~~~~~~~~~~  644 (650)
T PLN03151        565 LVGLGMSMLLGAWSKSPESYMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRVSTAMGFI  644 (650)
T ss_pred             HHhccHHHHHHHhhcCCCceeecCCChHHHHHHHHHHHHHHHHHHHHHhCeeechhHHHHHHHHHHHHHHHHHHHHhCcc
Confidence            99999999999887777777777777777778889999999999999999999999999999999999999999999999


Q ss_pred             cc
Q 040465          592 KL  593 (594)
Q Consensus       592 ~~  593 (594)
                      |.
T Consensus       645 ~~  646 (650)
T PLN03151        645 PW  646 (650)
T ss_pred             cc
Confidence            83


No 2  
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00  E-value=2.2e-84  Score=712.82  Aligned_cols=526  Identities=41%  Similarity=0.710  Sum_probs=423.6

Q ss_pred             CCCCCCcc-cccccccccccccccccccCC-CCCcccccceeeecc-cCCCchHHHHHHHHHHHHHHHHHHHHhhHhhhh
Q 040465           55 NNIGDGCA-GLHDYSDYKSRCKYVTTHVDC-QPKGYINYLQIFYCT-CGQFPILGHLVLLLWLVVLFYLLGNTAASYFCS  131 (594)
Q Consensus        55 ~~~~~~C~-~~~~~~~~~~rC~~V~~~~~C-~~~g~~~Yl~l~yC~-~~~~~~~~~~~~~l~l~~lf~~L~~~a~~~f~~  131 (594)
                      .++.++|+ ..++.-++++||+|+|+++|| .++||+||++++||. ....++..+.+..+|++.+|++|+.+++|||||
T Consensus        49 ~~~~~~~sc~~~~~~~~~~~C~~~k~~~d~~~~~g~~~y~~~~~C~~~~~~~i~~i~~~~~~~~~lf~~l~~~a~~yFsp  128 (605)
T KOG2399|consen   49 SNDWSSCSCGLAKHFTYESRCEFVKSNDDCCESGGFFDYLRLFYCGLNREVRIILIILLVLWLLFLFYLLGITADDYFSP  128 (605)
T ss_pred             cccccccchhhhhcCCHHHHhHHhhhccccccCCCchhhHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence            33455554 444444689999999999776 568999999999999 555588888999999999999999999999999


Q ss_pred             hHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHHHHHHhhhccCceeeeCCch
Q 040465          132 SLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIVVGVISILTSRKEFSVDKPS  211 (594)
Q Consensus       132 ~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv~G~~~l~~~~~~~~v~~~~  211 (594)
                      +++.+++.++|||++||+|+||+||++||+|++++|+....++|.++|+++|+++|++++|+|++++.   +|+++++..
T Consensus       129 sL~~is~~L~l~esvAGVTlLa~GNgapDvf~siasv~~~~~~~~~~~~~lg~alFVt~~V~G~i~~t---~pFki~~~~  205 (605)
T KOG2399|consen  129 SLSSISSLLRLSESVAGVTLLAFGNGAPDVFASIASVRGTPKGDLALNDLLGGALFVTTVVVGLIILT---KPFKINANS  205 (605)
T ss_pred             HHHHHHHHhcCCCceeeEEEeeecCCCchHHhhhheeecCCCcccHHHHHhccceeEEeeEeeeeeee---cceeeccch
Confidence            99999999999999999999999999999999999998866679999999999999999999999998   899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHcC-cchHHHHHHHHHHHHHHHHHHHH--HhHhhhhccc---cc--------cccCCCCCC
Q 040465          212 FIRDVLFFLFSLCALILIIVIG-EINLWASICFVSIYLIYVLAVSA--SYIYQRSRDR---KM--------SLFAGSPVS  277 (594)
Q Consensus       212 ~~rd~~f~l~a~~~l~~~l~~g-~i~~~~~~~ll~~Y~~Yv~~~~~--~~~~~~~~~~---~~--------~~~~~s~~~  277 (594)
                      +.||+.||+.+...+.++...+ ++++|.++.++..|..|+..+..  ..+.++.+++   ++        +..+..+..
T Consensus       206 ~iRDi~Fll~al~~l~~~~~~~~~v~~~~~l~fl~~y~~Yv~~vi~~~~~~i~~~~r~~~~~~~~~~~~~~~~~~~~~~~  285 (605)
T KOG2399|consen  206 FIRDILFLLLALLFLAFILLRGNKVEIWMALTFLGIYVVYVVTVIVLLSARIRKDRRKRFLELTPLRDMEESLFEALSVE  285 (605)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCceeHHhHHHHhHHHHHHHHHHHHHHHHHHHHHhhcchhccCCCcccchhhhcccccC
Confidence            9999999999999999888776 99999999999999999998886  3332222111   00        000000000


Q ss_pred             CcccccccccccccccCccccCCCCCCCCCcCCC--CCCCCh-----hhHhhhhccCCcc--hhhh---hhHHHHhhhcc
Q 040465          278 DSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKN--NLQEDP-----EQQCLRFFNLDSS--FCYY---FTKLLIVLELP  345 (594)
Q Consensus       278 ~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~--e~~~~~-----~~~~~~~~~~~~~--~~~~---~~k~~~i~~~P  345 (594)
                      ++.+.++++...+........+  ++..+.+..+  ......     .++..+..++-..  .|++   ++|+..+++.|
T Consensus       286 ~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~kv~~~i~~p  363 (605)
T KOG2399|consen  286 PSIEEDEEELLRETHTHRFSGH--DQMSNRAWTRIEIIYANNRNQDLFSDFFRHLRPWDSDEEFYEMNILTKVLLIIKIP  363 (605)
T ss_pred             CccccccchhhhhcCCCcccch--hhhhhhhHHHHhhcccccchHHHHHHHHhccCCCCchhhhhhhhHHHHHHHHHhhh
Confidence            0000000000000000000000  0000000000  000000     1111111111111  1222   67999999999


Q ss_pred             ccccccccccccC-CCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 040465          346 LYLPRRLTIPVVS-EDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPN  424 (594)
Q Consensus       346 ~~l~~~ltIP~v~-~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~  424 (594)
                      ..+++++|||++| |++|+|+++++|+..+|++..+.+.......+  ...+..|+++++++.+++.+++++|++++|||
T Consensus       364 ~~l~~~LtIP~v~~~~~Wsk~l~~~~~~~~P~~l~~~i~~~~~~~~--~~~~~~~~~~l~is~~la~l~~~~t~~~~ppk  441 (605)
T KOG2399|consen  364 LVLLLRLTIPVVDSELSWSKPLNLLQVVLAPLLLLFLIQSLLYSIS--QGSPGLYLISLIISIPLAILAFFFTRLDKPPK  441 (605)
T ss_pred             HhhhheeeecccCccccHHHHHHHHHHHHHHHHHHHHHHHhccccc--cccchHHHHHHHHHHHHHHHHHHhCcccCCCc
Confidence            9999999999997 99999999999999999999999887543321  22347889999999999999999999999999


Q ss_pred             cccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeec
Q 040465          425 KCLLPWLAGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCY  504 (594)
Q Consensus       425 ~~~~~~~~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~  504 (594)
                      +++.+|.++||+||++|||.+|+|+|+.++.+|.++|+|++++|+|++|||||+||+++|+++||+|+|   +||+|+|+
T Consensus       442 ~~~~v~~~~gF~mSi~wI~~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak~G~p---~MAmaac~  518 (605)
T KOG2399|consen  442 FYHWVFSALGFLMSIAWIYLIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAKQGYP---RMAMAACI  518 (605)
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHHcCcH---HHHHHHHh
Confidence            999999999999999999999999999999999999999999999999999999999999999999999   99999999


Q ss_pred             chhHHHHHHHHHHHHHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHH
Q 040465          505 AGPMFNTLVGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRL  584 (594)
Q Consensus       505 Gs~lfn~l~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~i  584 (594)
                      |||+||.++|+|++++++++.+++..+.++.|+.+..+.+|+.++++++++.+|.++||.+|..|+.|+.+|++|+.+.+
T Consensus       519 GGplfn~lvg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~~~~~  598 (605)
T KOG2399|consen  519 GGPLFNLLVGLGLPLVISSLQGKPGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFTLIFI  598 (605)
T ss_pred             hhHHHHHHHHhhHHHHHHHHhcCCCceecccCCceehhHHHHHHHHHHHHHHHhcccceeccchhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999988888888888888999999999999999999999999999999999999977777


Q ss_pred             HHHhcc
Q 040465          585 ASAFGF  590 (594)
Q Consensus       585 l~e~~v  590 (594)
                      +.|...
T Consensus       599 ll~~~~  604 (605)
T KOG2399|consen  599 LLELGG  604 (605)
T ss_pred             HHHHhc
Confidence            766543


No 3  
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=100.00  E-value=1.5e-60  Score=493.50  Aligned_cols=415  Identities=23%  Similarity=0.361  Sum_probs=318.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHH
Q 040465          107 HLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAF  186 (594)
Q Consensus       107 ~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~i  186 (594)
                      .++.++-++++|+.|+++++|||+|+++.|.++|++|++|||+|++|-|+|+||+|++++.+.- .+.++|+|+++||+.
T Consensus        57 VvlHv~g~iYmFvALAIVCDefFVPSL~vItEkL~iSdDVAGATFMAAGgSAPElFTSvIGVFI-t~~dVGiGTIVGSAv  135 (588)
T KOG1307|consen   57 VVLHVIGLIYMFVALAIVCDEFFVPSLDVITEKLGISDDVAGATFMAAGGSAPELFTSVIGVFI-TQGDVGIGTIVGSAV  135 (588)
T ss_pred             EEeehhhHHHHHHHHHHHhcccccccHHHHHHHhcCcccccchhhhhccCCchHHhhhheeEEE-ecCCcceeeeeehhh
Confidence            4567778889999999999999999999999999999999999999999999999999999988 788999999999999


Q ss_pred             HHHHHHHHHHhhhccCceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHhHhhhhccc
Q 040465          187 FVSSIVVGVISILTSRKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVSASYIYQRSRDR  266 (594)
Q Consensus       187 f~~~vv~G~~~l~~~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~~~~~~  266 (594)
                      ||+++|+|.|.++++ +..++..+++.||+.||.++++.+.++++|..+.|||+++|+.+|+.|++++-++.+..+..|+
T Consensus       136 FNIL~Vig~C~LFSr-qvl~LtWWPLfRD~sfY~lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi~Yv~~MKfN~~ie~~vk~  214 (588)
T KOG1307|consen  136 FNILCVIGVCGLFSR-QVLNLTWWPLFRDVSFYTLSLIMLIYFFLDELIMWWEALALLLMYISYVVFMKFNGQIEQLVKK  214 (588)
T ss_pred             hhHHHHHHHHHhhcc-cccccccchhhhhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHheeeehhhHHHHHHHH
Confidence            999999999999976 5888999999999999999999999999999999999999999999999998776543211000


Q ss_pred             --cc------cccCCCC----------CCCcc------ccc-------------cccccc--------------------
Q 040465          267 --KM------SLFAGSP----------VSDSL------FLH-------------IQDDFE--------------------  289 (594)
Q Consensus       267 --~~------~~~~~s~----------~~~~~------~~~-------------~~~~~~--------------------  289 (594)
                        +|      .+++..+          ..+..      ...             ..++++                    
T Consensus       215 ~~~rn~v~v~a~~~~~~~~~~~~Aa~~~~~~~~~a~~p~~~~~~~~~i~ql~~~~~~~~~~~~g~~~~~~~~~~~~g~~~  294 (588)
T KOG1307|consen  215 MLKRNKVNVLANGAEIKPGKNEDAAAELLDKSNAADLPHHNSASRNSIAQLMSGDPDPLSESAGLRIMISGHTPPNGRTQ  294 (588)
T ss_pred             HhccCcceecccccccCCcccchhhhhhhccCccccccccchhhHhHHHHHhcCCCccchhhccCcccccCCCCCCCchh
Confidence              00      0000000          00000      000             000000                    


Q ss_pred             ccccCccccCC-------CCC--------------------------------CCCC--c----CCCCCCCCh----hhH
Q 040465          290 ERAVPLIGCVD-------DEK--------------------------------PNHP--V----EKNNLQEDP----EQQ  320 (594)
Q Consensus       290 ~~~~pll~~~~-------~~~--------------------------------~~~~--~----~~~e~~~~~----~~~  320 (594)
                      ..++-+++..+       ++.                                ..+.  +    .++|.++++    ++.
T Consensus       295 ~~~~~l~~~~~~~~~~~~~~~~~k~~~~~i~~~~~h~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~  374 (588)
T KOG1307|consen  295 EKSRTLLQLPARLDNEDDNENGEKAVNIKIDIGDTHELDITGPNSGGRTSDVERIDVSDEEEEEAENENEDNEEFEEEQE  374 (588)
T ss_pred             hhhhhhhhcccccccccccccccccccccccccccceecccCCCCCcccCccccCCccccccchhcccCCCCcchhhcch
Confidence            00000000000       000                                0000  0    000000000    000


Q ss_pred             hhhh-ccC-C-cchhhh--hhHHHHhhhccccccccccccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchh
Q 040465          321 CLRF-FNL-D-SSFCYY--FTKLLIVLELPLYLPRRLTIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGIS  395 (594)
Q Consensus       321 ~~~~-~~~-~-~~~~~~--~~k~~~i~~~P~~l~~~ltIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~  395 (594)
                      ..++ -++ . +..|..  -+|+.+.+.+|+.+++.+|+|++++.+|.|.+                             
T Consensus       375 ~~~~e~~e~pl~~~wP~~~~k~l~y~~~~Pi~fpLw~TvPdvrkp~~rkfF-----------------------------  425 (588)
T KOG1307|consen  375 SEEEEPEEEPLSFDWPETKRKRLTYAFLAPIVFPLWLTVPDVRKPRSRKFF-----------------------------  425 (588)
T ss_pred             hhhccccCCCcCCCCccchhheeeeEEEeeeeeeEEEecCCcCCcccccee-----------------------------
Confidence            0000 010 0 111211  35888999999999999999999999988732                             


Q ss_pred             HHHHHHHHHHHHHHHHHhhhcccCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhh
Q 040465          396 LISYLGAAFVGIILGNLAFLSTKTCSPPNKCLLPWLAGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWG  475 (594)
Q Consensus       396 ~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~~~~~~~~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g  475 (594)
                                                          .++|+.|++||...+..+|+-+..+|+.+|||+.+||+|++|.|
T Consensus       426 ------------------------------------~vTFigSIlWIA~fSYLMVWwa~~iGeT~gIp~eIMGLTiLAAG  469 (588)
T KOG1307|consen  426 ------------------------------------PVTFIGSILWIAAFSYLMVWWANIIGETLGIPDEIMGLTILAAG  469 (588)
T ss_pred             ------------------------------------ehHHHHHHHHHHHHHHHHHHHHHHcccccCCCHHHhhhhhhhcC
Confidence                                                34689999999999999999999999999999999999999999


Q ss_pred             cChhHHHHHHHHHHhcCCCCcceeeeeecchhHHHHHHHHHHHHHHhccCCCCcc-eeecCCCchHHHHHHHHHHHHHHH
Q 040465          476 NSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFNTLVGLGISLVFSSSSQYPSS-YLIPKDSSLYETVGFLMAGLLWAL  554 (594)
Q Consensus       476 ~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn~l~glGl~~l~~~~~~~~~~-~~i~~~~~l~~~~~~l~~~L~~~l  554 (594)
                      ||+||+++++.+||||.+   |||+++.+|||+|++++|+|+||++.....+-++ +.+.. +.+..+.+.|++++++..
T Consensus       470 TSIPDlitSvIVARKGlG---DMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~~~~i~vsS-~GL~csi~lLf~ml~v~v  545 (588)
T KOG1307|consen  470 TSIPDLITSVIVARKGLG---DMAVSSSIGSNIFDILVGLPLPWLLYTLIYGFKSKISVSS-NGLVCSIGLLFAMLIVLV  545 (588)
T ss_pred             CchHHhhHhhhhcccccc---cceeecccccchhheeecCCcHHHHHHHHhhcCCceeecC-CceehHHHHHHHHHHHHH
Confidence            999999999999999999   9999999999999999999999999876644333 55543 357778888888888888


Q ss_pred             HHhhcCCceechhHHHHHHHHHHHHHHHHHHHHhcccc
Q 040465          555 VILPRKNMKLDKFLGIGLLAIYSCFLCVRLASAFGFLK  592 (594)
Q Consensus       555 i~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~il~e~~v~~  592 (594)
                      ..+..+|||++|..|+.++.+|++|+++++..|.+++.
T Consensus       546 ~~ia~~rWrMnK~lG~~m~llY~~Fl~~svmlE~~v~t  583 (588)
T KOG1307|consen  546 LGIALSRWRMNKILGFLMILLYFVFLIISVMLETDVLT  583 (588)
T ss_pred             HHHHHHhhhcccchhHHHHHHHHHHHHhhhheecceec
Confidence            88889999999999999999999999999999999875


No 4  
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=100.00  E-value=3.1e-58  Score=511.97  Aligned_cols=415  Identities=22%  Similarity=0.355  Sum_probs=311.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhH
Q 040465          106 GHLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGA  185 (594)
Q Consensus       106 ~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~  185 (594)
                      .+++.+++++++|++|+++++|||||+++.||++||+|+.++|+|++|+|||+||++++++|+.. ++.++++|+++||+
T Consensus       456 ~VVL~l~~liy~Fv~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~-g~sDIGVGNIVGSn  534 (1096)
T TIGR00927       456 WVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFI-SHSNVGIGTIVGSA  534 (1096)
T ss_pred             eeHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHc-CCCcceehhhHhHH
Confidence            34577788889999999999999999999999999999999999999999999999999999988 78899999999999


Q ss_pred             HHHHHHHHHHHhhhccCceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHhHhh----
Q 040465          186 FFVSSIVVGVISILTSRKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVSASYIYQ----  261 (594)
Q Consensus       186 if~~~vv~G~~~l~~~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~----  261 (594)
                      +||+++|+|+++++.. ..+.++++.+.||+.||++++.++.+++++|++++|+|++|+++|++|++++.++.+..    
T Consensus       535 IFNILLVLGl~aLis~-~~l~Ld~~~L~RDllFyILAv~lLilf~lDG~Itr~EgIILLlLYiiYVvvm~~n~~i~~~~~  613 (1096)
T TIGR00927       535 VFNILFVIGTCALFSR-EILNLTWWPLFRDVSFYILDLMMLILFFLDSLIAWWESLLLLLAYALYVFTMKWNKQIELWVK  613 (1096)
T ss_pred             HHHHHHHHhhheeecc-ccccccccceehhHHHHHHHHHHHHHHHhCCeEcHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999988743 24667788999999999999998888889999999999999999999999998886421    


Q ss_pred             hhcc-c-------------------cc-----------c------------------------ccCCCC-----C-----
Q 040465          262 RSRD-R-------------------KM-----------S------------------------LFAGSP-----V-----  276 (594)
Q Consensus       262 ~~~~-~-------------------~~-----------~------------------------~~~~s~-----~-----  276 (594)
                      ++.+ .                   +.           .                        ..+.+.     .     
T Consensus       614 ~~~~r~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  693 (1096)
T TIGR00927       614 EQLSRRPVAKVMALGDLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQ  693 (1096)
T ss_pred             Hhhhcccccccccccccccccccchhhccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            0000 0                   00           0                        000000     0     


Q ss_pred             C-----Cccc--c--c---------------------cccc--------cc-------------c--c------------
Q 040465          277 S-----DSLF--L--H---------------------IQDD--------FE-------------E--R------------  291 (594)
Q Consensus       277 ~-----~~~~--~--~---------------------~~~~--------~~-------------~--~------------  291 (594)
                      .     +.+.  .  +                     ..+.        +.             +  .            
T Consensus       694 ~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~g~~~~~e~~~~~~g~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  773 (1096)
T TIGR00927       694 EGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAE  773 (1096)
T ss_pred             cccchhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            0     0000  0  0                     0000        00             0  0            


Q ss_pred             ----------cc-C---cc-c-------c----------CCCC------------------------------CCC----
Q 040465          292 ----------AV-P---LI-G-------C----------VDDE------------------------------KPN----  305 (594)
Q Consensus       292 ----------~~-p---ll-~-------~----------~~~~------------------------------~~~----  305 (594)
                                .. +   .. +       .          .+.+                              .++    
T Consensus       774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~e~g~~  853 (1096)
T TIGR00927       774 GKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVD  853 (1096)
T ss_pred             ccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccchhhhhhhhccccccccccc
Confidence                      00 0   00 0       0          0000                              000    


Q ss_pred             --------CCcCCCCCCCCh-------hhHhh--hhccCC--cchhhh--hhHHHHhhhccccccccccccccCCCccch
Q 040465          306 --------HPVEKNNLQEDP-------EQQCL--RFFNLD--SSFCYY--FTKLLIVLELPLYLPRRLTIPVVSEDKWSK  364 (594)
Q Consensus       306 --------~~~~~~e~~~~~-------~~~~~--~~~~~~--~~~~~~--~~k~~~i~~~P~~l~~~ltIP~v~~~~w~k  364 (594)
                              |++ +.+.+++.       +++-.  ++.++.  ...|..  ++++.+++.+|+.+++++|||++.+.+|.|
T Consensus       854 ~~~~~d~~dse-~~~~~~~~~e~~~~ee~~~ee~eeeee~~~~~~~P~~~~~~~~wvl~~Pi~~~l~~TIPDcrk~~~~k  932 (1096)
T TIGR00927       854 GGGGSDGGDSE-EEEEEEEEEEEEEEEEEEEEEEEEENEEPLSLEWPETRQKQAIYLFLLPIVFPLWLTVPDVRRQEARK  932 (1096)
T ss_pred             ccCCCCccccc-ccccccchhhhccccccccccccccccccccccCCccccceeEeEEecchhheeeeecCCCCcccccc
Confidence                    000 00000000       00000  000000  001111  457889999999999999999999999977


Q ss_pred             hHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccchhhhhhHHHHHHHHHH
Q 040465          365 TYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPNKCLLPWLAGGFLMSVTWTYV  444 (594)
Q Consensus       365 ~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~~~~~~~~~gF~~Sv~wI~~  444 (594)
                      ++                                                                 .++|++|++||.+
T Consensus       933 ~y-----------------------------------------------------------------~ltFi~SIiwIsi  947 (1096)
T TIGR00927       933 FF-----------------------------------------------------------------VITFLGSIMWIAM  947 (1096)
T ss_pred             ee-----------------------------------------------------------------eehHHHHHHHHHH
Confidence            32                                                                 3579999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHHHHHHHHHHHHHhcc
Q 040465          445 TAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFNTLVGLGISLVFSSS  524 (594)
Q Consensus       445 ~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn~l~glGl~~l~~~~  524 (594)
                      .+..++..+..+|.++|||++++|+|++|+|||+||+++++.+|++|++   +||++||+|||+||+++++|++|++...
T Consensus       948 ~SyilV~~at~IG~vlGIse~VmGlTfLA~GTSIPDlisSvivArkG~g---dMAVan~iGSNIFnIllgLGlPWlI~~l 1024 (1096)
T TIGR00927       948 FSYLMVWWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLG---DMAVSSSVGSNIFDITVGLPVPWLLFSL 1024 (1096)
T ss_pred             HHHHHHHHHHHhhhhcCCChhhhhhhhhhhhcccHHHHHHHHHHHccCC---cceeeeccccchheeeeeccHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999   9999999999999999999999999876


Q ss_pred             CCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHHHHHhcccc
Q 040465          525 SQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRLASAFGFLK  592 (594)
Q Consensus       525 ~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~il~e~~v~~  592 (594)
                      ..+..++.+..+ .++..+.+++.++++.++.+..+||+++|+.|++++++|++|++++++.|++++.
T Consensus      1025 i~g~~pV~V~S~-GL~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiLiE~~ii~ 1091 (1096)
T TIGR00927      1025 INGLQPVPVSSN-GLFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLEDRIIS 1091 (1096)
T ss_pred             hccCcceeecCc-cHHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHHHhcceEe
Confidence            655556656544 3555555566667777777788999999999999999999999999999999873


No 5  
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=100.00  E-value=4.1e-41  Score=352.62  Aligned_cols=312  Identities=19%  Similarity=0.321  Sum_probs=237.8

Q ss_pred             HHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHH
Q 040465          111 LLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSS  190 (594)
Q Consensus       111 ~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~  190 (594)
                      ++++++++.++ ..++|+|+++.+.+++++|+||.++|+|++|+|||+||+++++.|+++ |++|+++||++|||+||++
T Consensus         5 ~~~~~~gl~~l-~~ga~~lv~~~~~ia~~lgis~~viG~tiva~gTSlPEl~vsv~A~~~-g~~~ia~GnilGSni~ni~   82 (325)
T PRK10734          5 TALLIIGLLLL-VYGADRLVFAASILCRTFGIPPLIIGMTVVGIGTSLPEIIVSVAASLH-GQRDLAVGTALGSNITNIL   82 (325)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcchhHHHHHHHHHHc-CCCcchhhhhhhHHHHHHH
Confidence            45666777777 679999999999999999999999999999999999999999999998 8999999999999999999


Q ss_pred             HHHHHHhhhccCceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHhHhhhhccccccc
Q 040465          191 IVVGVISILTSRKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVSASYIYQRSRDRKMSL  270 (594)
Q Consensus       191 vv~G~~~l~~~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~~~~~~~~~~  270 (594)
                      +++|+..++   +|++++++.+.||..+++.+..++..+..++++++++|++++.+|++|+.+.+..+++++++++    
T Consensus        83 lilg~~~l~---~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~~~~~~~~~~~~----  155 (325)
T PRK10734         83 LILGLAALI---RPFTVHSDVLRRELPLMLLVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIVKIARLAERQGN----  155 (325)
T ss_pred             HHHHHHHHh---CCcccChHHHHHHHHHHHHHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHHHHHHhcccccc----
Confidence            999999998   6888888888899888777666555566899999999999999999999998866542111000    


Q ss_pred             cCCCCCCCcccccccccccccccCccccCCCCCCCCCcCCCCCCCChhhHhhhhccCCcchhhhhhHHHHhhhccccccc
Q 040465          271 FAGSPVSDSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKNNLQEDPEQQCLRFFNLDSSFCYYFTKLLIVLELPLYLPR  350 (594)
Q Consensus       271 ~~~s~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~~P~~l~~  350 (594)
                                     +              +++++      +.++.++         +                      
T Consensus       156 ---------------~--------------~~~~~------~~~~~~~---------~----------------------  169 (325)
T PRK10734        156 ---------------D--------------SLTRE------QLAELPR---------E----------------------  169 (325)
T ss_pred             ---------------c--------------ccchh------hhccccc---------c----------------------
Confidence                           0              00000      0000000         0                      


Q ss_pred             cccccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccchh
Q 040465          351 RLTIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPNKCLLPW  430 (594)
Q Consensus       351 ~ltIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~~~~~~  430 (594)
                                 ++++..                             ..+                               
T Consensus       170 -----------~~~~~~-----------------------------~~~-------------------------------  178 (325)
T PRK10734        170 -----------GGLPVA-----------------------------FLW-------------------------------  178 (325)
T ss_pred             -----------ccHHHH-----------------------------HHH-------------------------------
Confidence                       000000                             011                               


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHH
Q 040465          431 LAGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFN  510 (594)
Q Consensus       431 ~~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn  510 (594)
                          +..+.+++...++.+|+..+.+++.+|+||.++|+|++|+|||+||+++++.++|||++   ++|+||++|||+||
T Consensus       179 ----l~~g~~~l~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~g~~---~~avgniiGsnifn  251 (325)
T PRK10734        179 ----LGIALIIMPMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARKGEN---DIAVGNIIGSNIFN  251 (325)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHcCCC---chHHHHHHhHHHHH
Confidence                11233345667999999999999999999999999999999999999999999999999   99999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCcceeecCCCchHHHHH-HHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHH
Q 040465          511 TLVGLGISLVFSSSSQYPSSYLIPKDSSLYETVG-FLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRL  584 (594)
Q Consensus       511 ~l~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~-~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~i  584 (594)
                      +++.+|+++++....-.+.+        ...+.. ++..+++.... ...++.|++|++|..|+.+|+.|+....
T Consensus       252 i~~~lg~~~l~~~~~v~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~i~r~~G~~Ll~~Y~~y~~~l~  317 (325)
T PRK10734        252 IVIVLGLPALISPGEINPLA--------FSRDYWVMLLVSVIFALL-CWRRKRRIGRGAGALLLGGFIVWLAMLY  317 (325)
T ss_pred             HHHHHHHHHhhccccccchh--------HHHHHHHHHHHHHHHHHH-HHHcCCccChHHHHHHHHHHHHHHHHHH
Confidence            99999999999743211111        111111 12222222111 2247889999999999999999976654


No 6  
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=100.00  E-value=1.1e-40  Score=347.39  Aligned_cols=308  Identities=25%  Similarity=0.448  Sum_probs=244.9

Q ss_pred             HHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHH
Q 040465          111 LLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSS  190 (594)
Q Consensus       111 ~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~  190 (594)
                      +.++...+.++ +.++|+|+++.+.+|+++|+||.+.|+|++|+|||+||+.+++.|..+ |++|+++||++|||++|++
T Consensus        12 ~~~~i~~l~ll-v~~ad~lv~~a~~Is~~~gi~~~~iG~tiva~gTslPE~~vs~~a~l~-g~~~iavGnvlGSni~ni~   89 (320)
T COG0530          12 ILLLIAGLILL-VKGADLLVDAASAISRRFGISELIIGLTIVAFGTSLPELAVSLVAALS-GNPDIAVGNVLGSNIFNIL   89 (320)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHccChHHHHHHHHHHc-CCCCeeeehhhhHHHHHHH
Confidence            33444444444 899999999999999999999999999999999999999999999999 8899999999999999999


Q ss_pred             HHHHHHhhhccCceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHhHhhhhccccccc
Q 040465          191 IVVGVISILTSRKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVSASYIYQRSRDRKMSL  270 (594)
Q Consensus       191 vv~G~~~l~~~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~~~~~~~~~~  270 (594)
                      ++.|+.+++   +|.+++++.+.||..|++++...+.++..+|++++++++.++..|++|+.+.+..++..++       
T Consensus        90 li~gl~ali---~~~~~~~~~~~r~~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~~~~~~-------  159 (320)
T COG0530          90 LILGLAALI---APLKVDSDVLRREIPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLSREAEE-------  159 (320)
T ss_pred             HHHHHHHHH---hhhHhhhhHHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhhhccc-------
Confidence            999999999   6888888899999999999999999999999999999999999999999998765421000       


Q ss_pred             cCCCCCCCcccccccccccccccCccccCCCCCCCCCcCCCCCCCChhhHhhhhccCCcchhhhhhHHHHhhhccccccc
Q 040465          271 FAGSPVSDSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKNNLQEDPEQQCLRFFNLDSSFCYYFTKLLIVLELPLYLPR  350 (594)
Q Consensus       271 ~~~s~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~~P~~l~~  350 (594)
                                             |      +|+++         |.|+         +..                    
T Consensus       160 -----------------------~------~~~~~---------e~~~---------~~~--------------------  172 (320)
T COG0530         160 -----------------------P------GEQEN---------ERPK---------KGS--------------------  172 (320)
T ss_pred             -----------------------c------ccccc---------cccc---------cch--------------------
Confidence                                   0      00000         0000         000                    


Q ss_pred             cccccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccchh
Q 040465          351 RLTIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPNKCLLPW  430 (594)
Q Consensus       351 ~ltIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~~~~~~  430 (594)
                                 ..|                               ...+                               
T Consensus       173 -----------~~~-------------------------------~~~~-------------------------------  179 (320)
T COG0530         173 -----------LRK-------------------------------ALLV-------------------------------  179 (320)
T ss_pred             -----------HHH-------------------------------HHHH-------------------------------
Confidence                       000                               0111                               


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHH
Q 040465          431 LAGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFN  510 (594)
Q Consensus       431 ~~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn  510 (594)
                          ++.+..-+...++.+|+..+.+++.+|+||.++|+|++|+|||+||+++++.++|||++   ++|+||++|||+||
T Consensus       180 ----~~~~~~~l~~g~~llv~~~~~iA~~~gi~e~~igltivaigTSlPElv~si~a~rkg~~---~iavGnviGSni~n  252 (320)
T COG0530         180 ----LVIGLILLVVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARKGED---DIAVGNVIGSNIFN  252 (320)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCC---CeEEeeecchHHHH
Confidence                12233334556899999999999999999999999999999999999999999999999   99999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHHH
Q 040465          511 TLVGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRLA  585 (594)
Q Consensus       511 ~l~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~il  585 (594)
                      +++++|++.++.+....+       + ....+..+++...+..++...++++|++|++|..+++.|+.|..+.+.
T Consensus       253 ~~~~lGi~~~~~~~~~~~-------~-~~~~~~~vmi~~~l~l~l~~~~~~~~i~r~~g~~ll~~Y~~~~~~~~~  319 (320)
T COG0530         253 ILIVLGISALIGPITVEP-------S-ALLVDAPVLILVTLLLLLFLARRRRRIGRKEGLLLLGLYIVYVALLIL  319 (320)
T ss_pred             HHHHHhHHHhccccccCc-------h-hHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHhh
Confidence            999999999998522211       1 133344444433332222225799999999999999999999887653


No 7  
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of  100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=100.00  E-value=3e-40  Score=344.62  Aligned_cols=301  Identities=27%  Similarity=0.434  Sum_probs=238.0

Q ss_pred             HHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHH
Q 040465          113 WLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIV  192 (594)
Q Consensus       113 ~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv  192 (594)
                      ++.+.+.++ ..++|+|+|+++.+++++|+||.++|+|++|+|||+||+++++.|.++ |++|+++||++|||+||.+++
T Consensus         6 ~~~~~~~~~-~~~a~~lv~~~~~ia~~lgl~~~v~G~tlla~gtslPEl~~si~a~~~-g~~~la~g~ilGS~l~n~l~i   83 (307)
T TIGR00367         6 YLILGLILL-IYGADLFVKSSVRIARKLGISPLIIGVTVVAIGTSLPELFTSLIASLI-GQPDIGVGNVIGSNIFNILLI   83 (307)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHhc-CCCCeehhhhhhHHHHHHHHH
Confidence            333444444 789999999999999999999999999999999999999999999988 899999999999999999999


Q ss_pred             HHHHhhhccCceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHhHhhhhccccccccC
Q 040465          193 VGVISILTSRKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVSASYIYQRSRDRKMSLFA  272 (594)
Q Consensus       193 ~G~~~l~~~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~~~~~~~~~~~~  272 (594)
                      +|+++++   +|++++++.+.||..+++++...+..+..+|++++++|++++.+|++|+.+.+.++++   +++      
T Consensus        84 ~g~~~l~---~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~~~~---~~~------  151 (307)
T TIGR00367        84 LGLSAIF---SPIIVDTDWLRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKVERQ---MIN------  151 (307)
T ss_pred             HHHHHhh---cceeechHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHh---ccc------
Confidence            9999998   5888999999999999999988887788899999999999999999999998766531   000      


Q ss_pred             CCCCCCcccccccccccccccCccccCCCCCCCCCcCCCCCCCChhhHhhhhccCCcchhhhhhHHHHhhhccccccccc
Q 040465          273 GSPVSDSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKNNLQEDPEQQCLRFFNLDSSFCYYFTKLLIVLELPLYLPRRL  352 (594)
Q Consensus       273 ~s~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~~P~~l~~~l  352 (594)
                                   +.              .+++      +.++++         ++...|                    
T Consensus       152 -------------~~--------------~~~~------~~~~~~---------~~~~~~--------------------  169 (307)
T TIGR00367       152 -------------DT--------------YTEE------QLDENN---------RRKQIF--------------------  169 (307)
T ss_pred             -------------cc--------------cchh------hhhccc---------ccccHH--------------------
Confidence                         00              0000      000000         000000                    


Q ss_pred             cccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccchhhh
Q 040465          353 TIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPNKCLLPWLA  432 (594)
Q Consensus       353 tIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~~~~~~~~  432 (594)
                                                                   .                                ..
T Consensus       170 ---------------------------------------------~--------------------------------~~  172 (307)
T TIGR00367       170 ---------------------------------------------F--------------------------------LI  172 (307)
T ss_pred             ---------------------------------------------H--------------------------------HH
Confidence                                                         0                                01


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHHHH
Q 040465          433 GGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFNTL  512 (594)
Q Consensus       433 ~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn~l  512 (594)
                      ..++.+.+|+..+++.+++..+.+++.+|+|++++|+|++|+|||+||+++++..+|+|++   +||+++++|||+||++
T Consensus       173 ~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~g~~---~~avg~~iGs~i~~~~  249 (307)
T TIGR00367       173 VLLIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPELVVSVAAARKGLG---DIAVGNVIGSNIFNIL  249 (307)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHHcCCC---chHHHHHhhhHHHHHH
Confidence            1245667789999999999999999999999999999999999999999999999999998   9999999999999999


Q ss_pred             HHHHHHHHHhccCCCCcceeecCCCchHHHHHHHH-HHHHHHHHHhhcCCceechhHHHHHHHHHHHH
Q 040465          513 VGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLM-AGLLWALVILPRKNMKLDKFLGIGLLAIYSCF  579 (594)
Q Consensus       513 ~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~-~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~f  579 (594)
                      +++|+++++.+....+.+        ...+..+++ .++...+  ...++++++|++|+.|+.+|++|
T Consensus       250 ~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~g~~l~~~Y~~y  307 (307)
T TIGR00367       250 VGLGVPSLFYPIPVEPLA--------YSLDAPVMVIVTLVLML--VFKTSMKLGRWEGFLLLALYIAY  307 (307)
T ss_pred             HHHHHHHHhcccccchhH--------HHHHHHHHHHHHHHHHH--HHHhcCeehHHHHHHHHHHHHhC
Confidence            999999999753211111        222333322 2222222  22468899999999999999876


No 8  
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=100.00  E-value=2.8e-31  Score=282.76  Aligned_cols=304  Identities=16%  Similarity=0.145  Sum_probs=215.0

Q ss_pred             HHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHHHHHH
Q 040465          117 LFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIVVGVI  196 (594)
Q Consensus       117 lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv~G~~  196 (594)
                      .+..+ ..++|+++.+.+.+|+++|.+   .|.+++|+|||+||+++++.|..+ |+++++.||++||+++|+++++|++
T Consensus        43 ~~~~l-i~~a~~lv~~a~~lA~~~G~~---vG~ll~a~~ts~pEL~vsi~A~~~-g~~~la~gnivGS~i~NilLIlGl~  117 (365)
T TIGR00846        43 NLLGI-IPLAERVSFATEQLAHRLGPT---LGGLLNATFGNAVELIISLMALGE-GKVEVVRASLLGSILSNLLLVLGLS  117 (365)
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHhCCc---hhhHHHHHHhHHHHHHHHHHHccC-CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44445 678999999999999999987   566677999999999999999988 9999999999999999999999999


Q ss_pred             hhhccCceeeeC-CchHHHHHH-----HHHHHHHHHHH--H---HHcC-----cchHHHHHHHHHHHHHHHHHHHHHhHh
Q 040465          197 SILTSRKEFSVD-KPSFIRDVL-----FFLFSLCALIL--I---IVIG-----EINLWASICFVSIYLIYVLAVSASYIY  260 (594)
Q Consensus       197 ~l~~~~~~~~v~-~~~~~rd~~-----f~l~a~~~l~~--~---l~~g-----~i~~~~~~~ll~~Y~~Yv~~~~~~~~~  260 (594)
                      .++   +|.+++ ++.+.|+..     .+++++..+.+  .   ..+|     .+++++|++++.+|++|+.+.+.+|+.
T Consensus       118 ~l~---~~~~~~~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~~~~~~  194 (365)
T TIGR00846       118 LFL---GGIKNIREQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQLVTHRQ  194 (365)
T ss_pred             HHH---hccCccceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence            998   567763 344666654     22233222211  1   1244     599999999999999999998866541


Q ss_pred             hhhccccccccCCCCCCCcccccccccccccccCccccCCCCCCCCCcCCCCCCCChhhHhhhhccCCcchhhhhhHHHH
Q 040465          261 QRSRDRKMSLFAGSPVSDSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKNNLQEDPEQQCLRFFNLDSSFCYYFTKLLI  340 (594)
Q Consensus       261 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~  340 (594)
                      ..++++                   ++            ++++++      +.++++                       
T Consensus       195 ~f~~~~-------------------~~------------~~~~~~------~~~~~~-----------------------  214 (365)
T TIGR00846       195 LFEPQE-------------------EA------------DSDYDD------EVHEEP-----------------------  214 (365)
T ss_pred             cccccc-------------------cc------------cccccc------cccccc-----------------------
Confidence            100000                   00            000000      000000                       


Q ss_pred             hhhccccccccccccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCC
Q 040465          341 VLELPLYLPRRLTIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTC  420 (594)
Q Consensus       341 i~~~P~~l~~~ltIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~  420 (594)
                                         ++|+.+..                             ..++                    
T Consensus       215 -------------------~~~~~~~~-----------------------------i~~l--------------------  226 (365)
T TIGR00846       215 -------------------TVISPWSA-----------------------------AAWL--------------------  226 (365)
T ss_pred             -------------------ccccHHHH-----------------------------HHHH--------------------
Confidence                               00110000                             0111                    


Q ss_pred             CCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceee
Q 040465          421 SPPNKCLLPWLAGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAI  500 (594)
Q Consensus       421 ~pP~~~~~~~~~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av  500 (594)
                                     +.+..-+..+++.+|+..+.+++.+|+|+.++|+|++|.|+|+||+++++.+|++|+.   |+|+
T Consensus       227 ---------------~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~g~~---~lav  288 (365)
T TIGR00846       227 ---------------VGATIVVALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFKNKL---DIAL  288 (365)
T ss_pred             ---------------HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCc---chHH
Confidence                           1122234556999999999999999999999999999999999999999999999999   9999


Q ss_pred             eeecchhHHHHHHHHHHHHHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHH
Q 040465          501 SGCYAGPMFNTLVGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFL  580 (594)
Q Consensus       501 ~a~~Gs~lfn~l~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl  580 (594)
                      ++++|||+||+++.+|+..+++...+  .+.....+  ... ...+..+++...  ....+.|.+|.+|..++.+|++|.
T Consensus       289 g~~iGSni~n~l~vl~~~~li~~~~~--~~~~l~~~--~~~-~~~l~~s~~~~~--~~~~~~~~~~~eG~~ll~~Y~~~~  361 (365)
T TIGR00846       289 GVALGSALQIALFVVPVVVLVAWMLG--IPMDLNFG--APE-TVALALSVFLTT--ITLQDGRSNYLEGAVLLALYIIIA  361 (365)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcC--CceeccCc--HHH-HHHHHHHHHHHH--HHHcCCcCcHHHHHHHHHHHHHHH
Confidence            99999999999999999999875432  23333333  222 222222222111  123688999999999999999997


Q ss_pred             H
Q 040465          581 C  581 (594)
Q Consensus       581 ~  581 (594)
                      .
T Consensus       362 ~  362 (365)
T TIGR00846       362 M  362 (365)
T ss_pred             H
Confidence            5


No 9  
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=100.00  E-value=1e-30  Score=277.13  Aligned_cols=300  Identities=16%  Similarity=0.204  Sum_probs=222.2

Q ss_pred             HHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHHHHHHhhhccC
Q 040465          123 NTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIVVGVISILTSR  202 (594)
Q Consensus       123 ~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv~G~~~l~~~~  202 (594)
                      +-.+++++.+.+.+|+++|  +.+.|+|+.++|| +||+++++.|..+ |+.|++.||++||+++|.++++|++.++   
T Consensus        30 ipla~~l~~~~~~lA~~~g--~~vggl~~~~~gt-~pEL~vsi~A~~~-g~~~i~~gnivGS~i~NllLilGls~li---  102 (349)
T TIGR00378        30 IPLAAIMGNATEELADKAG--PTIGGLLNATFGN-AVELIVSIIALKE-GLVRIVQASLTGSLLGNLLLVLGLCFFF---  102 (349)
T ss_pred             HHHHHHHHHHHHHHHHHcC--chHHHHHHHhhcc-HHHHHHHHHHHHc-CChhhhHHHHHHHHHHhHHHHHHHHHHH---
Confidence            4578999999999999999  8999999999999 9999999999999 9999999999999999999999999998   


Q ss_pred             ceeeeCCchHHHH-----HHHHHHHHHHHHHHH-----H----cC---cchHHHHHHHHHHHHHHHHHHHHHhHhhhhcc
Q 040465          203 KEFSVDKPSFIRD-----VLFFLFSLCALILII-----V----IG---EINLWASICFVSIYLIYVLAVSASYIYQRSRD  265 (594)
Q Consensus       203 ~~~~v~~~~~~rd-----~~f~l~a~~~l~~~l-----~----~g---~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~~~~~  265 (594)
                      +|.+.+++.+.|+     ..+++++++.+...-     .    ++   .+++++|++++.+|++|+.+...+|+...+++
T Consensus       103 ggl~~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~l~~h~~~f~~~  182 (349)
T TIGR00378       103 GGLNYKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQLGTHHALYEQQ  182 (349)
T ss_pred             hccccceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhCCc
Confidence            5777777777777     666666654443320     1    33   68999999999999999999988775211110


Q ss_pred             ccccccCCCCCCCcccccccccccccccCccccCCCCCCCCCcCCCCCCCChhhHhhhhccCCcchhhhhhHHHHhhhcc
Q 040465          266 RKMSLFAGSPVSDSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKNNLQEDPEQQCLRFFNLDSSFCYYFTKLLIVLELP  345 (594)
Q Consensus       266 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~~P  345 (594)
                      ++                  +             ++|+++      +.++.+                            
T Consensus       183 ~~------------------~-------------~~~~~~------~~~~~~----------------------------  197 (349)
T TIGR00378       183 EA------------------E-------------TDEVME------TIERNP----------------------------  197 (349)
T ss_pred             cc------------------c-------------cccccc------cccccc----------------------------
Confidence            00                  0             000000      000000                            


Q ss_pred             ccccccccccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCCc
Q 040465          346 LYLPRRLTIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPNK  425 (594)
Q Consensus       346 ~~l~~~ltIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~  425 (594)
                                   +++|+.+..                             ..+                          
T Consensus       198 -------------~~~~~~~~~-----------------------------~~~--------------------------  209 (349)
T TIGR00378       198 -------------HHSLSVKSS-----------------------------TVV--------------------------  209 (349)
T ss_pred             -------------cccccHHHH-----------------------------HHH--------------------------
Confidence                         001111000                             011                          


Q ss_pred             ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecc
Q 040465          426 CLLPWLAGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYA  505 (594)
Q Consensus       426 ~~~~~~~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~G  505 (594)
                               ++.+.+.+..+++.+|+..+.+++.+|+|+.++|+|++|.|+|+||+++++.+|+||+.   |+|+++++|
T Consensus       210 ---------L~~~~v~i~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~~~~---~~ai~~~~G  277 (349)
T TIGR00378       210 ---------LLGTTVIVAFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMKDKM---DLALGVAIG  277 (349)
T ss_pred             ---------HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHcCCc---ccHHHHHHh
Confidence                     11223345567999999999999999999999999999999999999999999999998   999999999


Q ss_pred             hhHHHHHHHHHHHHHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHH
Q 040465          506 GPMFNTLVGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLC  581 (594)
Q Consensus       506 s~lfn~l~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~  581 (594)
                      |+++|.++.+++..+++...++  |+.+..+  .++....++..++...   ..++.|.+|.+|..++.+|+++-+
T Consensus       278 S~i~~~l~v~p~lvl~~~~~~~--~~~L~f~--~~~~~~l~~~v~~~~~---~~~dg~~n~leG~~ll~~Y~i~~~  346 (349)
T TIGR00378       278 SSLQIALFVAPVLVIVGWMIDV--PMTLNFS--TFELVALFIAVLLSNY---ISLDGESNWLEGVMLLAMYIIIAM  346 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC--CceecCc--HHHHHHHHHHHHHHHH---HHhCCCCcHHHHHHHHHHHHHHHH
Confidence            9999999999998887655443  4555444  3333332333333222   258999999999999999998743


No 10 
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.97  E-value=4.2e-30  Score=292.69  Aligned_cols=155  Identities=20%  Similarity=0.370  Sum_probs=131.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhC------------------CCcchhhHHHHhhccChHHHHHH
Q 040465          103 PILGHLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILK------------------LPPTIAGVTLLALGNGASDVFSS  164 (594)
Q Consensus       103 ~~~~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~------------------ls~~vaGvTllAlGns~Pel~~s  164 (594)
                      +...-++.++|++++|+.++++|++|+ |++|.|+++.+                  +|++|+|+|++|+|||+||++++
T Consensus        71 ~~~r~~~~~~~l~y~F~~~~i~ad~f~-~sie~i~~~~~~v~~~~~~ge~~~~~~ri~~~tvag~t~~A~gssaPe~~~s  149 (928)
T TIGR00845        71 KIARATVYFVAMVYMFLGVSIIADRFM-ASIEVITSQEKEITIKKPNGETTVTTVRIWNETVSNLTLMALGSSAPEILLS  149 (928)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccceeeeecCCCcceeeEeeeCCcccccceeeeccCCchHHHHH
Confidence            466778999999999999999999986 99999999643                  59999999999999999999999


Q ss_pred             HHHhhcCC--CCccchhhhhhhHHHHHHHHHHHHhhhccC---ceeeeCCchHHHHHHHHHHHHHHHHHHH---HcCcch
Q 040465          165 IVSFTRSD--DGDVGLNSVLGGAFFVSSIVVGVISILTSR---KEFSVDKPSFIRDVLFFLFSLCALILII---VIGEIN  236 (594)
Q Consensus       165 i~a~~~~~--~~~la~g~iiGs~if~~~vv~G~~~l~~~~---~~~~v~~~~~~rd~~f~l~a~~~l~~~l---~~g~i~  236 (594)
                      ++++..++  ++++++|+++||++||+++|.|++.+....   +.++ +-+.|.--..|-++|.+++.+++   ..|.+.
T Consensus       150 ~~~~~~~~~~~g~lg~gtivGsa~Fn~~vi~~~~~~~~p~g~~~~i~-~l~Vf~vTa~wSifAYiWl~lil~v~sp~vv~  228 (928)
T TIGR00845       150 VIEVCGHNFEAGDLGPSTIVGSAAFNMFIIIAICVYVIPDGETRKIK-HLRVFFVTAAWSVFAYVWLYLILAVFSPGVVE  228 (928)
T ss_pred             HHHHhccCCccccccccceehhHHHHHHhhheeEEEeccCccceeee-eeeEEEEeeeHHHHHHHHHHhhheeeCCcHHH
Confidence            99987632  469999999999999999999999887432   2222 33566667778888888887765   579999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhH
Q 040465          237 LWASICFVSIYLIYVLAVSASYI  259 (594)
Q Consensus       237 ~~~~~~ll~~Y~~Yv~~~~~~~~  259 (594)
                      .|||++-++.|.+.|+..+..++
T Consensus       229 vwE~~lTl~ffp~~V~~A~~aD~  251 (928)
T TIGR00845       229 VWEGLLTFFFFPLCVVFAWVADR  251 (928)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999987765


No 11 
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=99.81  E-value=8.9e-18  Score=173.19  Aligned_cols=312  Identities=20%  Similarity=0.236  Sum_probs=221.3

Q ss_pred             HHHHHHHHHh-hHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHHHH
Q 040465          116 VLFYLLGNTA-ASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIVVG  194 (594)
Q Consensus       116 ~lf~~L~~~a-~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv~G  194 (594)
                      +++-++|++- ++++.-+.|.+|.+-|  +++.|+.-..||| +-|++.++.|.++ |+..++-++++||.+-|.+++.|
T Consensus        99 F~lsll~iiPLA~~l~~ateqls~~tg--~tvGgllNAtfGn-aiElii~ilALk~-g~~riVq~SlLGSILsnlLLvlG  174 (441)
T KOG1397|consen   99 FLLSLLGIIPLAERLGFATEQLSAYTG--PTVGGLLNATFGN-AIELIIYILALKN-GKVRIVQGSLLGSILSNLLLVLG  174 (441)
T ss_pred             HHHHHhhhhhHHHHHHHHHHHHHhhcC--CcHHHHHhhhhcc-HHHHHHHHHHhhc-CceEEEehhhHHHHHHHHHHHhh
Confidence            4455566654 7888999999999875  8999998888888 6999999999999 99999999999999999999999


Q ss_pred             HHhhhcc--CceeeeCCchHHHHHHHHHHHHHHHHH--HH---H-----cC-------cchHHHHHHHHHHHHHHHHHHH
Q 040465          195 VISILTS--RKEFSVDKPSFIRDVLFFLFSLCALIL--II---V-----IG-------EINLWASICFVSIYLIYVLAVS  255 (594)
Q Consensus       195 ~~~l~~~--~~~~~v~~~~~~rd~~f~l~a~~~l~~--~l---~-----~g-------~i~~~~~~~ll~~Y~~Yv~~~~  255 (594)
                      +.....+  ++.-+.|++.--.....+++++...+.  ++   +     ++       .+++.-++++++.|++|+++.+
T Consensus       175 ~s~~~Ggi~rk~Q~Fn~~~A~v~s~lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL  254 (441)
T KOG1397|consen  175 LSLFCGGIRRKDQRFNIKSAGVNSALLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQL  254 (441)
T ss_pred             HHHhhcccccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhh
Confidence            9887643  122223444433333444444443332  12   1     11       3689999999999999999988


Q ss_pred             HHhHhhhhccccccccCCCCCCCcccccccccccccccCccccCCCCCCCCCcCCCCCCCChhhHhhhhccCCcchhhhh
Q 040465          256 ASYIYQRSRDRKMSLFAGSPVSDSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKNNLQEDPEQQCLRFFNLDSSFCYYF  335 (594)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~  335 (594)
                      .+++...  .    .           +               ..++|+++.  ++.+.+++                   
T Consensus       255 ~t~~h~~--~----~-----------~---------------~~~ee~~~~--d~~~s~~~-------------------  281 (441)
T KOG1397|consen  255 KTARHIW--Q----F-----------P---------------TPDEEETEQ--DDEVSNED-------------------  281 (441)
T ss_pred             hcccccC--C----C-----------C---------------CCChhcccc--cccccccC-------------------
Confidence            7642100  0    0           0               000000000  00000000                   


Q ss_pred             hHHHHhhhccccccccccccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhh
Q 040465          336 TKLLIVLELPLYLPRRLTIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFL  415 (594)
Q Consensus       336 ~k~~~i~~~P~~l~~~ltIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~  415 (594)
                                            |.+.|+|+-.                             ..|+               
T Consensus       282 ----------------------e~p~is~~ss-----------------------------~~~L---------------  295 (441)
T KOG1397|consen  282 ----------------------EAPNISRWSS-----------------------------IIWL---------------  295 (441)
T ss_pred             ----------------------CCCcchHHHH-----------------------------HHHH---------------
Confidence                                  1123444321                             1111               


Q ss_pred             cccCCCCCCcccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCC
Q 040465          416 STKTCSPPNKCLLPWLAGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNG  495 (594)
Q Consensus       416 ~t~~~~pP~~~~~~~~~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~  495 (594)
                                          .++-+|++.+|+.+|+.++...+-+|+|+.|+|+|++|+-.+..|.+.++..|.||+-  
T Consensus       296 --------------------~~~T~~vsllaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k~kl--  353 (441)
T KOG1397|consen  296 --------------------LIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMKDKL--  353 (441)
T ss_pred             --------------------HHHHHHHHHHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeecCcc--
Confidence                                2344678889999999999999999999999999999999999999999999999988  


Q ss_pred             cceeeeeecchhHHHHHHHHHHHHHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHH
Q 040465          496 AQIAISGCYAGPMFNTLVGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAI  575 (594)
Q Consensus       496 ~~~av~a~~Gs~lfn~l~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~  575 (594)
                       |+++|-.+||.+.--++.++.+.++.-..+  .++++..+  .+++..+++...+.+.+   +.+.+.+...|.+|+.+
T Consensus       354 -dLslgVaigsalQI~Lf~vP~~v~v~W~~g--~~M~LnF~--~~et~~l~isVfl~~y~---lqdG~Sny~kG~mLll~  425 (441)
T KOG1397|consen  354 -DLSLGVAIGSALQIALFVVPFSVIVGWIMG--ISMDLNFP--LLETACLFISVFLVAYL---LQDGKSNYFKGLMLLLC  425 (441)
T ss_pred             -cchhhhhhhhhHhHHHhhhhHHHHhhhhcC--CceEEecc--HHHHHHHHHHHHHHHHH---HhcCchhHHHHHHHHHH
Confidence             999999999999999999998777753323  34555443  57777666665555544   58999999999999999


Q ss_pred             HHHHH
Q 040465          576 YSCFL  580 (594)
Q Consensus       576 Y~~fl  580 (594)
                      |++..
T Consensus       426 Y~Iia  430 (441)
T KOG1397|consen  426 YLIIA  430 (441)
T ss_pred             HHHHH
Confidence            98754


No 12 
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.79  E-value=1.4e-18  Score=182.54  Aligned_cols=141  Identities=16%  Similarity=0.356  Sum_probs=120.2

Q ss_pred             HHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHH
Q 040465          111 LLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSS  190 (594)
Q Consensus       111 ~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~  190 (594)
                      .+|++.....+ ..++++++++.+.+++.+|+||.+.|+|++|+|||+||+++++.|.++ |+.|+++||++|||+||++
T Consensus       176 ~~~l~~g~~~l-~~gs~~lv~~~~~ia~~lgis~~~iG~tiva~gtslPE~~~sv~a~~~-g~~~~avgniiGsnifni~  253 (325)
T PRK10734        176 FLWLGIALIIM-PMATRMVIDNATVLANYFAISELTIGLTVIAIGTSLPELATAIAGARK-GENDIAVGNIIGSNIFNIV  253 (325)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhccHHHHHHHHHHHHc-CCCchHHHHHHhHHHHHHH
Confidence            45555566666 578999999999999999999999999999999999999999999999 9999999999999999999


Q ss_pred             HHHHHHhhhccCceeeeCCchHHHHHHHHHHHHHHHHHH-H-HcCcchHHHHHHHHHHHHHHHHHHHH
Q 040465          191 IVVGVISILTSRKEFSVDKPSFIRDVLFFLFSLCALILI-I-VIGEINLWASICFVSIYLIYVLAVSA  256 (594)
Q Consensus       191 vv~G~~~l~~~~~~~~v~~~~~~rd~~f~l~a~~~l~~~-l-~~g~i~~~~~~~ll~~Y~~Yv~~~~~  256 (594)
                      +++|+..++   .|..++++.+.||...++....++... . .++++++++|..++.+|+.|+...++
T Consensus       254 ~~lg~~~l~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~G~~Ll~~Y~~y~~~l~~  318 (325)
T PRK10734        254 IVLGLPALI---SPGEINPLAFSRDYWVMLLVSVIFALLCWRRKRRIGRGAGALLLGGFIVWLAMLYW  318 (325)
T ss_pred             HHHHHHHhh---ccccccchhHHHHHHHHHHHHHHHHHHHHHcCCccChHHHHHHHHHHHHHHHHHHh
Confidence            999999998   566676778889987655444333322 3 46789999999999999999887763


No 13 
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of  100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.78  E-value=1.2e-18  Score=182.08  Aligned_cols=135  Identities=19%  Similarity=0.398  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHH
Q 040465          111 LLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSS  190 (594)
Q Consensus       111 ~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~  190 (594)
                      +++++.....+ ..++++++++++.+++.+|+|+.++|+|++|+|||+||+++++.+.++ |+.|+++||++||++||.+
T Consensus       172 ~~~~~~~~~~i-~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~a~~ts~PE~~~~i~a~~~-g~~~~avg~~iGs~i~~~~  249 (307)
T TIGR00367       172 IVLLIIGLTGL-VVGSRLLVDGAVQIAEIFGISEKIIGLTLLAIGTSLPELVVSVAAARK-GLGDIAVGNVIGSNIFNIL  249 (307)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcccHHHHHHHHHHHc-CCCchHHHHHhhhHHHHHH
Confidence            34455555555 578999999999999999999999999999999999999999999999 8899999999999999999


Q ss_pred             HHHHHHhhhccCceeeeCCchHHHHHHHHHHHHHHHH-HHHHcCcchHHHHHHHHHHHHHH
Q 040465          191 IVVGVISILTSRKEFSVDKPSFIRDVLFFLFSLCALI-LIIVIGEINLWASICFVSIYLIY  250 (594)
Q Consensus       191 vv~G~~~l~~~~~~~~v~~~~~~rd~~f~l~a~~~l~-~~l~~g~i~~~~~~~ll~~Y~~Y  250 (594)
                      +++|+..++   .|+++++..+.||..+++.....+. .+..+|++++|+|+.|+.+|++|
T Consensus       250 ~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~~l~~~Y~~y  307 (307)
T TIGR00367       250 VGLGVPSLF---YPIPVEPLAYSLDAPVMVIVTLVLMLVFKTSMKLGRWEGFLLLALYIAY  307 (307)
T ss_pred             HHHHHHHHh---cccccchhHHHHHHHHHHHHHHHHHHHHHhcCeehHHHHHHHHHHHHhC
Confidence            999999998   5778888899999998877655554 34568999999999999999987


No 14 
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.74  E-value=2.7e-17  Score=172.00  Aligned_cols=142  Identities=21%  Similarity=0.413  Sum_probs=128.9

Q ss_pred             HHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHH
Q 040465          109 VLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFV  188 (594)
Q Consensus       109 ~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~  188 (594)
                      -..+|++..+..+ ..++++++++...+++.+|+||.+.|+|+.|+|||.||+.+++.+.++ |+.|+++||++|||+||
T Consensus       175 ~~~~~~~~~~~~l-~~g~~llv~~~~~iA~~~gi~e~~igltivaigTSlPElv~si~a~rk-g~~~iavGnviGSni~n  252 (320)
T COG0530         175 KALLVLVIGLILL-VVGSELLVDGAVEIAEIFGISELIIGLTIVAIGTSLPELVVSIVAARK-GEDDIAVGNVIGSNIFN  252 (320)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcccHHHHHHHHHHHc-CCCCeEEeeecchHHHH
Confidence            3455666666666 679999999999999999999999999999999999999999999999 99999999999999999


Q ss_pred             HHHHHHHHhhhccCceeeeCCchHHHHHHHHHHHHHHHHHH--HHcCcchHHHHHHHHHHHHHHHHHHH
Q 040465          189 SSIVVGVISILTSRKEFSVDKPSFIRDVLFFLFSLCALILI--IVIGEINLWASICFVSIYLIYVLAVS  255 (594)
Q Consensus       189 ~~vv~G~~~l~~~~~~~~v~~~~~~rd~~f~l~a~~~l~~~--l~~g~i~~~~~~~ll~~Y~~Yv~~~~  255 (594)
                      .++++|+..++   +|...++..+.+|..+++....++..+  ..+.++++++|..+++.|++|+.+.+
T Consensus       253 ~~~~lGi~~~~---~~~~~~~~~~~~~~~vmi~~~l~l~l~~~~~~~~i~r~~g~~ll~~Y~~~~~~~~  318 (320)
T COG0530         253 ILIVLGISALI---GPITVEPSALLVDAPVLILVTLLLLLFLARRRRRIGRKEGLLLLGLYIVYVALLI  318 (320)
T ss_pred             HHHHHhHHHhc---cccccCchhHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHHh
Confidence            99999999998   677888999999999999888777766  47899999999999999999998765


No 15 
>PF01699 Na_Ca_ex:  Sodium/calcium exchanger protein;  InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.73  E-value=9.6e-18  Score=154.62  Aligned_cols=130  Identities=25%  Similarity=0.529  Sum_probs=111.5

Q ss_pred             HHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHHHHHHhhhccC
Q 040465          123 NTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIVVGVISILTSR  202 (594)
Q Consensus       123 ~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv~G~~~l~~~~  202 (594)
                      ..+++++++++|.+++++|+|+.+.|.|++|++|++||+++++.+.++ |++++++|+++||+++|.+++.|++.++...
T Consensus         4 ~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~-g~~~la~~~~~Gs~~~~~~l~~gl~~l~~~~   82 (140)
T PF01699_consen    4 IVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARK-GNPDLAIGNIIGSNIFNITLIVGLILLFGPI   82 (140)
T ss_dssp             HHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCT-T-CHHHHHHHHHHHHHHHHTHHHHHHHHS-B
T ss_pred             hHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhc-cccchhhhcccchHHHHHHHHHHHHHHhccc
Confidence            568999999999999999999999999999999999999999999999 8999999999999999999999999998431


Q ss_pred             c--eeeeCCchHHHHHHHHHHHHHHHHHHHH----cCcchHHHHHHHHHHHHHHHHH
Q 040465          203 K--EFSVDKPSFIRDVLFFLFSLCALILIIV----IGEINLWASICFVSIYLIYVLA  253 (594)
Q Consensus       203 ~--~~~v~~~~~~rd~~f~l~a~~~l~~~l~----~g~i~~~~~~~ll~~Y~~Yv~~  253 (594)
                      +  +.+.+...+.+|..+++++..++..+..    +++++++++++++.+|++|+++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~  139 (140)
T PF01699_consen   83 KLGSQTIDWSSFTRDFSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF  139 (140)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccchHHHHHHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence            1  1246788999999999998888777665    9999999999999999999875


No 16 
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70  E-value=2.2e-17  Score=174.16  Aligned_cols=155  Identities=15%  Similarity=0.265  Sum_probs=119.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHHHH
Q 040465          433 GGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFNTL  512 (594)
Q Consensus       433 ~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn~l  512 (594)
                      ..|+.|++.|...+-.+-+....+|...|+.+++..+|++|+|||+||.+++-.+|.+...  ||-++||+-|||--|+.
T Consensus       429 ~cFvvsi~~Igl~ta~igd~as~fgC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~~d~~--AD~~igNvTgSNaVNvf  506 (596)
T KOG1306|consen  429 ACFVVSILFIGLLTAVIGDLASHFGCTVGLKDSVTAVTFVALGTSVPDTFASKIAAEQDQT--ADASIGNVTGSNAVNVF  506 (596)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhceeecCccceeeeeeehhcCCCcHHHHHHHHHhhccc--ccccccceecccceeEE
Confidence            4799999999999999999999999999999999999999999999999999999998754  79999999999999999


Q ss_pred             HHHHHHHHHhccC--CCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCcee---------ch-hHHHHHHHHHHHHH
Q 040465          513 VGLGISLVFSSSS--QYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKL---------DK-FLGIGLLAIYSCFL  580 (594)
Q Consensus       513 ~glGl~~l~~~~~--~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l---------~r-~~G~~Ll~~Y~~fl  580 (594)
                      +|+|++|.+++..  .+++++.++....-+....|.+.+++...+ +..|+-++         .| .-..+++.+|++|+
T Consensus       507 lGiG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~v-l~~RR~~iggELGGP~~~k~~ta~~fv~lW~~yv  585 (596)
T KOG1306|consen  507 LGIGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVV-LVYRRPHIGGELGGPRGWKLLTAALFVSLWLLYV  585 (596)
T ss_pred             EeccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhhee-eEEeccccCcccCCcchHHHHHHHHHHHHHHHHH
Confidence            9999999998643  355677776554223223444444433222 22232222         22 23567788899999


Q ss_pred             HHHHHHHhcc
Q 040465          581 CVRLASAFGF  590 (594)
Q Consensus       581 ~~~il~e~~v  590 (594)
                      .++.+..-++
T Consensus       586 ~~s~leay~~  595 (596)
T KOG1306|consen  586 LLSSLEAYCV  595 (596)
T ss_pred             HHHHHHHhcc
Confidence            9988876554


No 17 
>PF01699 Na_Ca_ex:  Sodium/calcium exchanger protein;  InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.69  E-value=6.2e-17  Score=149.20  Aligned_cols=136  Identities=31%  Similarity=0.461  Sum_probs=102.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHHHHHHHHHHH
Q 040465          440 TWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFNTLVGLGISL  519 (594)
Q Consensus       440 ~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn~l~glGl~~  519 (594)
                      +|+..+|+++++.++.+++.+|+|+.++|+|++|++||+||+++++..+++|++   ++|+++++||+++|+++++|+.+
T Consensus         1 i~i~~~a~~l~~~~~~i~~~~~i~~~~~g~~lla~~~slpe~~~~~~~~~~g~~---~la~~~~~Gs~~~~~~l~~gl~~   77 (140)
T PF01699_consen    1 ILIIVAAEFLVESVEIIAERLGISESFLGLTLLALATSLPELIVAISAARKGNP---DLAIGNIIGSNIFNITLIVGLIL   77 (140)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCTB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT-C---HHHHHHHHHHHHHHHHTHHHHHH
T ss_pred             CEehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHcCHHHHHHHHHHhhcccc---chhhhcccchHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999999999999999999999   99999999999999999999999


Q ss_pred             HHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhh---cCCceechhHHHHHHHHHHHHHHH
Q 040465          520 VFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILP---RKNMKLDKFLGIGLLAIYSCFLCV  582 (594)
Q Consensus       520 l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~---~~~~~l~r~~G~~Ll~~Y~~fl~~  582 (594)
                      ++...+.++..  .+ +.....+..+++...... ..++   .+++|.+|++|+.++.+|++|+.+
T Consensus        78 l~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~  139 (140)
T PF01699_consen   78 LFGPIKLGSQT--ID-WSSFTRDFSFLLLAILLL-ILFFLAFIRDGRISRFEGLVLLILYILYLVF  139 (140)
T ss_dssp             HHS-B------------HHHHHHHHHHHHHHHHH-HHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred             Hhccccccccc--cc-cchHHHHHHHHHHHHHHH-HHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence            99866543211  11 111222333333222211 1222   259999999999999999999876


No 18 
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=99.68  E-value=6.4e-14  Score=145.99  Aligned_cols=305  Identities=15%  Similarity=0.196  Sum_probs=207.6

Q ss_pred             hhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHHHHHHhhhccCc-
Q 040465          125 AASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIVVGVISILTSRK-  203 (594)
Q Consensus       125 a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv~G~~~l~~~~~-  203 (594)
                      .+.+...+.|.+|.+.|  |...|+.+..+|| +=|++...+++.+ |++.++-+++.||.+-|++.+.|++.++.+-| 
T Consensus        49 lA~~v~~aaE~lA~~vG--~~~G~Lina~f~~-~iEvil~~~al~~-G~~~lvr~Si~gsIm~~~llv~GlslllGglr~  124 (368)
T COG0387          49 LAFSVVRAAEVLAARVG--EPYGSLINALFGN-AIEVILIVAALKS-GSPTLVRDSLYGSIMINLLLVVGLSLLLGGLRH  124 (368)
T ss_pred             HHHHHHHHHHHHHHHhC--CchhHHHHHHHHH-HHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHHHHHHHHHcchhh
Confidence            67889999999999986  7777777777777 7899999999988 79999999999999999999999999885311 


Q ss_pred             -eeeeCCchHHHHHHHHHHHHHHHHH--HHHc--------CcchHHHHHHHHHHHHHHHHHHHHHhHhhhhccccccccC
Q 040465          204 -EFSVDKPSFIRDVLFFLFSLCALIL--IIVI--------GEINLWASICFVSIYLIYVLAVSASYIYQRSRDRKMSLFA  272 (594)
Q Consensus       204 -~~~v~~~~~~rd~~f~l~a~~~l~~--~l~~--------g~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~~~~~~~~~~~~  272 (594)
                       .-+.|+..-......+..+....+.  .+..        -..+...+++++++|++++.+....|+.--...       
T Consensus       125 ~~Q~fN~~~a~~~~~~L~~~~~ialv~P~~~~~~~~~~~~~~~s~~~avv~i~~Y~lfL~fql~tH~~~f~~~-------  197 (368)
T COG0387         125 KTQPFNPHGAGTYLALLFTAATIALVLPTFFPYTGGGNFSLGQSLFVAVVLIALYGLFLFFQLKTHASLFWQV-------  197 (368)
T ss_pred             ceeecchhhHHHHHHHHHHHHHHHhhhhhhhcccCCCcchHhHHHHHHHHHHHHHHHHHHhhhhhhhhhhccc-------
Confidence             1112333332233333333121111  1111        136778899999999999999887764211000       


Q ss_pred             CCCCCCcccccccccccccccCccccCCCCCCCCCcCCCCCCCChhhHhhhhccCCcchhhhhhHHHHhhhccccccccc
Q 040465          273 GSPVSDSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKNNLQEDPEQQCLRFFNLDSSFCYYFTKLLIVLELPLYLPRRL  352 (594)
Q Consensus       273 ~s~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~~P~~l~~~l  352 (594)
                                   ++           .|++.|++         ++         |.                        
T Consensus       198 -------------~~-----------~e~~~ee~---------~~---------h~------------------------  211 (368)
T COG0387         198 -------------HE-----------AEGEAEED---------DP---------HH------------------------  211 (368)
T ss_pred             -------------cc-----------ccccCCCC---------CC---------CC------------------------
Confidence                         00           00000000         00         00                        


Q ss_pred             cccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccchhhh
Q 040465          353 TIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPNKCLLPWLA  432 (594)
Q Consensus       353 tIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~~~~~~~~  432 (594)
                          .++++|+.+...                             .++   +                            
T Consensus       212 ----~~~~~~s~~~s~-----------------------------~vL---l----------------------------  227 (368)
T COG0387         212 ----DDPSKWSVLLST-----------------------------GVL---L----------------------------  227 (368)
T ss_pred             ----CCccccchhHHH-----------------------------HHH---H----------------------------
Confidence                013345543211                             111   1                            


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHHHH
Q 040465          433 GGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFNTL  512 (594)
Q Consensus       433 ~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn~l  512 (594)
                          +..+-+..+|+.++..++..-+.+|.|+.++|+++.++-...||.++++.+|++|+-   |.+++-.+||.+...+
T Consensus       228 ----~~tv~v~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~~~m---qls~nia~Gsalq~~l  300 (368)
T COG0387         228 ----IATVLVALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALNNRM---QLSMNIAMGSALQTAL  300 (368)
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHH
Confidence                112224456999999999999999999999999999999778999999999999987   9999999999999999


Q ss_pred             HHHHHHHHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHH
Q 040465          513 VGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRL  584 (594)
Q Consensus       513 ~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~i  584 (594)
                      +..+.-.+++-+.++  |+.+...  ..+....+...++...   ..++.|.++.+|..++..|.+|.....
T Consensus       301 ltiP~lvlis~~~gq--pm~l~~~--~~elV~l~~~v~~~~~---~~sdG~sn~leG~~lL~lya~~~~~ff  365 (368)
T COG0387         301 LTIPVLVLISLFTGQ--PLTLGFG--PPELVLLVVTVFLANI---LFSDGRTNWLEGVVLLALYAIYAMLFF  365 (368)
T ss_pred             HHHHHHHHHHHHhCC--CccccCC--HHHHHHHHHHHHHHHH---hcCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            888877777655553  4444433  3334333333333332   369999999999999999999986543


No 19 
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.68  E-value=4.4e-16  Score=166.29  Aligned_cols=140  Identities=18%  Similarity=0.303  Sum_probs=115.9

Q ss_pred             HHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHH
Q 040465          110 LLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVS  189 (594)
Q Consensus       110 ~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~  189 (594)
                      .+++++....++ ..++++++++++.+++++|+|+.+.|+|++|+|+|+||..+++.|.++ |+.|+++||++|||+||+
T Consensus       222 ~i~~l~~~~~~l-~~~a~~lv~~~~~ia~~~gis~~~iGl~lvai~tslpE~~~si~aa~~-g~~~lavg~~iGSni~n~  299 (365)
T TIGR00846       222 AAAWLVGATIVV-ALLAEYLVDTIESAVESWGLSVAFIGVILAPIVGNAAEHAGAVIAAFK-NKLDIALGVALGSALQIA  299 (365)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHc-CCcchHHHHHHHHHHHHH
Confidence            344555566666 568999999999999999999999999999999999999999999999 999999999999999999


Q ss_pred             HHHHHHHhhhcc--CceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHH
Q 040465          190 SIVVGVISILTS--RKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLA  253 (594)
Q Consensus       190 ~vv~G~~~l~~~--~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~  253 (594)
                      ++++|+..++..  +.|++...+.  .|...+.++++++.+...+|+++++||+.++.+|++|+..
T Consensus       300 l~vl~~~~li~~~~~~~~~l~~~~--~~~~~l~~s~~~~~~~~~~~~~~~~eG~~ll~~Y~~~~~~  363 (365)
T TIGR00846       300 LFVVPVVVLVAWMLGIPMDLNFGA--PETVALALSVFLTTITLQDGRSNYLEGAVLLALYIIIAML  363 (365)
T ss_pred             HHHHHHHHHHHHhcCCceeccCcH--HHHHHHHHHHHHHHHHHcCCcCcHHHHHHHHHHHHHHHHH
Confidence            999999998742  2233333332  3555555665555566689999999999999999999764


No 20 
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.58  E-value=9.5e-15  Score=165.24  Aligned_cols=136  Identities=21%  Similarity=0.239  Sum_probs=107.3

Q ss_pred             HHH-HHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHHHHHHHHHH
Q 040465          440 TWT-YVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFNTLVGLGIS  518 (594)
Q Consensus       440 ~wI-~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn~l~glGl~  518 (594)
                      +++ ..+++.+|..++.++..+|+|+.+.|+|++|+|||+||+++++..++.|++   ++|+|+++||++||+++.+|++
T Consensus       469 v~LaIv~dDyFVPSLe~IAekLgLSE~VAGaTLLAfGTSAPELfTSLiAv~~g~s---DIGVGNIVGSnIFNILLVLGl~  545 (1096)
T TIGR00927       469 VALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELFTSLIGVFISHS---NVGIGTIVGSAVFNILFVIGTC  545 (1096)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHhCCcHhhhheeeeeeecCcHHHHHHHHHHHcCCC---cceehhhHhHHHHHHHHHHhhh
Confidence            443 446699999999999999999999999999999999999999999999988   9999999999999999999998


Q ss_pred             HHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHHHH
Q 040465          519 LVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRLAS  586 (594)
Q Consensus       519 ~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~il~  586 (594)
                      .++....     ..++.. .+..+..|+++.+.+.+.+  ..+.+++|++|++|+++|++|+.+....
T Consensus       546 aLis~~~-----l~Ld~~-~L~RDllFyILAv~lLilf--~lDG~Itr~EgIILLlLYiiYVvvm~~n  605 (1096)
T TIGR00927       546 ALFSREI-----LNLTWW-PLFRDVSFYILDLMMLILF--FLDSLIAWWESLLLLLAYALYVFTMKWN  605 (1096)
T ss_pred             eeecccc-----cccccc-ceehhHHHHHHHHHHHHHH--HhCCeEcHHHHHHHHHHHHHHHHHHHHh
Confidence            8875321     111111 1233455555443332221  3578899999999999999999877654


No 21 
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.55  E-value=4.1e-14  Score=150.55  Aligned_cols=138  Identities=13%  Similarity=0.275  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHH
Q 040465          111 LLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSS  190 (594)
Q Consensus       111 ~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~  190 (594)
                      +.|++.....+ ..++|+++++.+.+++.+|+|+.+.|+|++|+|+++||..+++.+.++ |+.|+++|+++|||+++.+
T Consensus       207 ~~~L~~~~v~i-~~~a~~lv~~~~~~~~~~gi~~~~igl~iva~~tslpE~~~ai~aa~~-~~~~~ai~~~~GS~i~~~l  284 (349)
T TIGR00378       207 TVVLLGTTVIV-AFCSEFLVGTIDNVVESTGLSKLFIGVIVIPIVGNAAEHATAVLVAMK-DKMDLALGVAIGSSLQIAL  284 (349)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcccHHHHHHHHHHHc-CCcccHHHHHHhHHHHHHH
Confidence            44455555555 568999999999999999999999999999999999999999999999 9999999999999999999


Q ss_pred             HHHHHHhhhc--cCceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Q 040465          191 IVVGVISILT--SRKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVL  252 (594)
Q Consensus       191 vv~G~~~l~~--~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~  252 (594)
                      ++.+...++.  .++|+..+-+  ..|...++++++++.+...||+.++.||..++.+|+++.+
T Consensus       285 ~v~p~lvl~~~~~~~~~~L~f~--~~~~~~l~~~v~~~~~~~~dg~~n~leG~~ll~~Y~i~~~  346 (349)
T TIGR00378       285 FVAPVLVIVGWMIDVPMTLNFS--TFELVALFIAVLLSNYISLDGESNWLEGVMLLAMYIIIAM  346 (349)
T ss_pred             HHHHHHHHHHHHhCCCceecCc--HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence            9999865542  1246555444  4688888888777777889999999999999999999865


No 22 
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=99.49  E-value=1.8e-11  Score=129.32  Aligned_cols=299  Identities=14%  Similarity=0.120  Sum_probs=193.9

Q ss_pred             hhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhh--cCCCCccchhhhhhhHHHHHHHHHHHHhhhccC
Q 040465          125 AASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFT--RSDDGDVGLNSVLGGAFFVSSIVVGVISILTSR  202 (594)
Q Consensus       125 a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~--~~~~~~la~g~iiGs~if~~~vv~G~~~l~~~~  202 (594)
                      ++---+...|.+++|+|= |  -|-.+|++.=..=|+. -+.++.  .++++.++--++.-.-+.+...++|++.++.+ 
T Consensus        53 ~~~~~v~hAe~lA~~~Ge-P--~GtliLtlsv~~iEv~-li~~~Ml~g~~~~tlaRDtvfa~vMi~~nGilGl~ll~GG-  127 (366)
T PRK10599         53 SAFSVVRHADVLAHRLGE-P--YGSLILSLSVVILEVS-LISALMATGDAAPTLMRDTLYSIIMIVTGGLVGFSLLLGG-  127 (366)
T ss_pred             HHHHHHHHHHHHHHHHCC-C--hHHHHHHHHHHHHHHH-HHHHHHcCCCCCchHHHHHHHHHHHHHhccHHHHHHHHhc-
Confidence            344456789999999983 3  3778888888888843 333333  22467888899999999999999999998843 


Q ss_pred             ceeeeCCchHHHHHH-HHHHHHHHHH---HH----HHcC----cchHHHHHHHHHHHHHHHHHHHHHhHhhhhccccccc
Q 040465          203 KEFSVDKPSFIRDVL-FFLFSLCALI---LI----IVIG----EINLWASICFVSIYLIYVLAVSASYIYQRSRDRKMSL  270 (594)
Q Consensus       203 ~~~~v~~~~~~rd~~-f~l~a~~~l~---~~----l~~g----~i~~~~~~~ll~~Y~~Yv~~~~~~~~~~~~~~~~~~~  270 (594)
                        .+...+.|-++.. -+..+...+.   .+    ...+    ..++..+++++.+|.+|+.+...+|+..-..+     
T Consensus       128 --lr~~eQ~fn~~ga~~~~~~ll~La~l~LvlP~~~~~~~~s~~~s~~~avv~lvlY~~fL~fQl~tHr~~F~~~-----  200 (366)
T PRK10599        128 --RKFATQYMNLFGIKQYLIALFPLAIIVLVFPMALPGANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYE-----  200 (366)
T ss_pred             --cccCeeecCHHhHHHHHHHHHHHHHHHHhcCcccCCCccchhHHHHHHHHHHHHHHHHHHHhccchHHHhccc-----
Confidence              3333344444322 2222222221   11    1122    24567788999999999998877664211100     


Q ss_pred             cCCCCCCCcccccccccccccccCccccCCCCCCCCCcCCCCCCCChhhHhhhhccCCcchhhhhhHHHHhhhccccccc
Q 040465          271 FAGSPVSDSLFLHIQDDFEERAVPLIGCVDDEKPNHPVEKNNLQEDPEQQCLRFFNLDSSFCYYFTKLLIVLELPLYLPR  350 (594)
Q Consensus       271 ~~~s~~~~~~~~~~~~~~~~~~~pll~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~~~P~~l~~  350 (594)
                                                  .++|++++   + +..+++          + .                    
T Consensus       201 ----------------------------~~~~~~~~---~-~~~~~~----------~-~--------------------  217 (366)
T PRK10599        201 ----------------------------HEDEGDDD---D-PHHGKP----------S-A--------------------  217 (366)
T ss_pred             ----------------------------cccccccc---c-cccccc----------c-c--------------------
Confidence                                        00000000   0 000000          0 0                    


Q ss_pred             cccccccCCCccchhHHHHHHhHHHHHHHHHHhhccccccCCchhHHHHHHHHHHHHHHHHHhhhcccCCCCCCcccchh
Q 040465          351 RLTIPVVSEDKWSKTYAVISVTLAPLLLAALLNTQGEKHLGSGISLISYLGAAFVGIILGNLAFLSTKTCSPPNKCLLPW  430 (594)
Q Consensus       351 ~ltIP~v~~~~w~k~l~~~q~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~t~~~~pP~~~~~~~  430 (594)
                                ++.                                  .|-...                           
T Consensus       218 ----------~~~----------------------------------~~s~~~---------------------------  226 (366)
T PRK10599        218 ----------HSS----------------------------------LWHAIW---------------------------  226 (366)
T ss_pred             ----------chh----------------------------------HHHHHH---------------------------
Confidence                      000                                  000000                           


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHhcCCCCcceeeeeecchhHHH
Q 040465          431 LAGGFLMSVTWTYVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMNGGPNGAQIAISGCYAGPMFN  510 (594)
Q Consensus       431 ~~~gF~~Sv~wI~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~G~p~~~~~av~a~~Gs~lfn  510 (594)
                          .+.+.+.+..+|+.++..++...+.+|+|+++.|+.+ |.-...||.++++.+|+|++-   |.+++-++||.+..
T Consensus       227 ----L~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afiGvII-aiv~~apE~~tAV~aA~kNkm---q~slnialGSsLq~  298 (366)
T PRK10599        227 ----LIIHLIAVIAVTKMNASPLETLLTSMNAPVAFTGFLV-ALLILSPEGLGALKAVLNNQV---QRAMNLFFGSVLAT  298 (366)
T ss_pred             ----HHHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHHHHHH-HHHHcchhHHHHHHHHHcCch---HHHHHHHHHHHHHH
Confidence                0112223344599999999999999999999999887 666667999999999999987   99999999999999


Q ss_pred             HHHHHHHHHHHhccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHH
Q 040465          511 TLVGLGISLVFSSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRL  584 (594)
Q Consensus       511 ~l~glGl~~l~~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~i  584 (594)
                      +++.++.-.+++.+.++  |+.+..+  .++... +..+++..  .+..++.|.++.+|..++.+|+.|+...+
T Consensus       299 illtvP~lvlig~~~g~--pm~L~f~--~~e~vl-L~ltv~v~--~~t~~dGrsN~LeG~~hL~lf~~y~~l~~  365 (366)
T PRK10599        299 ISLTVPVVTLIAFLTGN--ELQFGLG--APEMVV-MVASLVLC--HISFSTGRTNVLNGAAHLALFAAYLMTIF  365 (366)
T ss_pred             HHHHHHHHHHHHHHhCC--CeEecCC--HHHHHH-HHHHHHHH--HhccCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            99999988888766654  5666555  344443 33333322  22368999999999999999999988764


No 23 
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.48  E-value=3.3e-13  Score=155.28  Aligned_cols=145  Identities=23%  Similarity=0.325  Sum_probs=111.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhh
Q 040465          105 LGHLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGG  184 (594)
Q Consensus       105 ~~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs  184 (594)
                      ..+++.++|+.++.+.        ....+..++..+|+|+.+.|+|++|+|||+||++++++|+.+++..|+++||++||
T Consensus       757 ~~f~~sI~~Ig~l~~~--------i~~~a~~ig~~~gi~~~viGlt~vA~GTSlPEl~~S~~aA~~~~~~d~aigNv~GS  828 (928)
T TIGR00845       757 ACFVVSILMIGVLTAF--------IGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGS  828 (928)
T ss_pred             HHHHHHHHHHHHHHHH--------HHHHHHHHHHHcCCCHHhhhheeeeEecCcHHHHHHHHHHHcCCCCceeEEeecch
Confidence            3333445555444444        45567888999999999999999999999999999999999955699999999999


Q ss_pred             HHHHHHHHHHHHhhhc------cCceeeeCCchHHHHHHHHHHHHHHHHHHH-Hc------Cc------chHHHHHHHHH
Q 040465          185 AFFVSSIVVGVISILT------SRKEFSVDKPSFIRDVLFFLFSLCALILII-VI------GE------INLWASICFVS  245 (594)
Q Consensus       185 ~if~~~vv~G~~~l~~------~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l-~~------g~------i~~~~~~~ll~  245 (594)
                      |+||+++++|+.+++.      .+.|+.+++..+..|+..+++..++.+.++ ++      |+      -.+..+..|+.
T Consensus       829 NifNi~l~lGv~~~i~~~~~~~~~~~~~V~~~~l~~~v~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~  908 (928)
T TIGR00845       829 NAVNVFLGIGVAWSIAAIYHAANGTQFKVSPGTLAFSVTLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALFVL  908 (928)
T ss_pred             HHHHHHHHHHHHHHHhhhhhcccCceEEECccchhHHHHHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHHHH
Confidence            9999999999999884      234788988888899887775544443333 22      11      34556888999


Q ss_pred             HHHHHHHHHHHH
Q 040465          246 IYLIYVLAVSAS  257 (594)
Q Consensus       246 ~Y~~Yv~~~~~~  257 (594)
                      ++++|++..-..
T Consensus       909 lw~~y~~~s~l~  920 (928)
T TIGR00845       909 LWLLYILFSSLE  920 (928)
T ss_pred             HHHHHHHHHHHH
Confidence            999998876544


No 24 
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.45  E-value=2e-13  Score=143.56  Aligned_cols=145  Identities=19%  Similarity=0.363  Sum_probs=122.5

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhh
Q 040465          104 ILGHLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLG  183 (594)
Q Consensus       104 ~~~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiG  183 (594)
                      +..++..++|++..-|++-++|        ..+++.+|+|+.++|+|+||-|||.||+.++++-+++ |-+|+|+++-+|
T Consensus       426 ~vTFigSIlWIA~fSYLMVWwa--------~~iGeT~gIp~eIMGLTiLAAGTSIPDlitSvIVARK-GlGDMAVSsSiG  496 (588)
T KOG1307|consen  426 PVTFIGSILWIAAFSYLMVWWA--------NIIGETLGIPDEIMGLTILAAGTSIPDLITSVIVARK-GLGDMAVSSSIG  496 (588)
T ss_pred             ehHHHHHHHHHHHHHHHHHHHH--------HHcccccCCCHHHhhhhhhhcCCchHHhhHhhhhccc-ccccceeecccc
Confidence            5677899999999889886664        6789999999999999999999999999999999999 999999999999


Q ss_pred             hHHHHHHHHHHHHhhhc----c-CceeeeCCchHHHHHHHHHHHHHHHH--HHHHcCcchHHHHHHHHHHHHHHHHHHHH
Q 040465          184 GAFFVSSIVVGVISILT----S-RKEFSVDKPSFIRDVLFFLFSLCALI--LIIVIGEINLWASICFVSIYLIYVLAVSA  256 (594)
Q Consensus       184 s~if~~~vv~G~~~l~~----~-~~~~~v~~~~~~rd~~f~l~a~~~l~--~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~  256 (594)
                      ||+|.+++.+|+.+++.    + +.++.++.+.+...+..+++.++++.  ..+.+.+++..-|.+++++|++|+++.+.
T Consensus       497 SNiFDI~VGLplPWLL~~lI~~~~~~i~vsS~GL~csi~lLf~ml~v~v~~ia~~rWrMnK~lG~~m~llY~~Fl~~svm  576 (588)
T KOG1307|consen  497 SNIFDILVGLPLPWLLYTLIYGFKSKISVSSNGLVCSIGLLFAMLIVLVLGIALSRWRMNKILGFLMILLYFVFLIISVM  576 (588)
T ss_pred             cchhheeecCCcHHHHHHHHhhcCCceeecCCceehHHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHhhhh
Confidence            99999999999998762    2 23388888877777666655444443  45678899999999999999999998764


Q ss_pred             H
Q 040465          257 S  257 (594)
Q Consensus       257 ~  257 (594)
                      -
T Consensus       577 l  577 (588)
T KOG1307|consen  577 L  577 (588)
T ss_pred             e
Confidence            3


No 25 
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.43  E-value=2.1e-12  Score=146.13  Aligned_cols=134  Identities=24%  Similarity=0.323  Sum_probs=110.1

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCcchhhhhHHhhhcChhHHHHHHHHHHh-cCCCCcceeeeeecchhHHHHHHHHHHHHHH
Q 040465          443 YVTAEELVSLLVSLGKVLGISPSVLGLTVLAWGNSLGDLIANAAMAMN-GGPNGAQIAISGCYAGPMFNTLVGLGISLVF  521 (594)
Q Consensus       443 ~~~A~~lv~~~~~ig~~~gis~~~lGltv~a~g~sl~dlv~~~~~a~~-G~p~~~~~av~a~~Gs~lfn~l~glGl~~l~  521 (594)
                      ..+++.++..++.+++.+++||++.|+|++|+|||.||++++++++.. |.+   ++|+|+++||++||+++.+|+..++
T Consensus       156 ~ta~dyF~p~l~~Is~~L~lse~vAGvTlLAfGNsaPDlf~si~a~~~~~~~---~l~ig~ilGs~lf~~~vV~G~v~l~  232 (650)
T PLN03151        156 NTAADYFCCSLEKLSKLLRLPPTVAGVTLLPLGNGAPDVFASIAAFVGKDAG---EVGLNSVLGGAVFVTCVVVGIVSLC  232 (650)
T ss_pred             HHHHHHhhHHHHHHHHHhCCCHHHHHHHHHHHhCCcHHHHHHHHHHHcCCCC---ceeeehhhhHHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999999999987664 455   9999999999999999999999887


Q ss_pred             hccCCCCcceeecCCCchHHHHHHHHHHHHHHHHHhhcCCceechhHHHHHHHHHHHHHHHHHHH
Q 040465          522 SSSSQYPSSYLIPKDSSLYETVGFLMAGLLWALVILPRKNMKLDKFLGIGLLAIYSCFLCVRLAS  586 (594)
Q Consensus       522 ~~~~~~~~~~~i~~~~~l~~~~~~l~~~L~~~li~v~~~~~~l~r~~G~~Ll~~Y~~fl~~~il~  586 (594)
                      ..    ..|+.++... ...+..|+++++.+..+  ...+.++++++|+.++.+|++|+++.+..
T Consensus       233 ~~----~~pf~v~~~~-f~RD~~F~lla~~~l~~--~l~~g~v~~~eai~ll~lY~~Yv~vv~~~  290 (650)
T PLN03151        233 VA----DKEVQIDKRC-FIRDLCFFLFTLVSLLV--ILMVGKVTVGGAIAFVSIYVVYAFLVAAN  290 (650)
T ss_pred             cc----CCceeecchh-HHHhHHHHHHHHHHHHH--HHHcCeEhHHHHHHHHHHHHHHHHHHHhh
Confidence            52    1345565543 45667776655444332  24578999999999999999999887754


No 26 
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=99.02  E-value=3.6e-09  Score=112.02  Aligned_cols=140  Identities=14%  Similarity=0.301  Sum_probs=115.2

Q ss_pred             HHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHH
Q 040465          111 LLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSS  190 (594)
Q Consensus       111 ~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~  190 (594)
                      ..|+++....+ ..-+|++++++|...+.+|+|+.+.|+.+..+|| +||-.+++.+.++ |+-|.+++-.+||.+....
T Consensus       224 ~~~L~v~lv~V-v~lAe~lv~sIe~~v~~~Glp~afiGvIIaiv~~-apE~~tAV~aA~k-Nkmq~slnialGSsLq~il  300 (366)
T PRK10599        224 AIWLIIHLIAV-IAVTKMNASPLETLLTSMNAPVAFTGFLVALLIL-SPEGLGALKAVLN-NQVQRAMNLFFGSVLATIS  300 (366)
T ss_pred             HHHHHHHHHHH-HHHHHHhHhhHHHHHHhcCCCHHHHHHHHHHHHc-chhHHHHHHHHHc-CchHHHHHHHHHHHHHHHH
Confidence            34555555444 3359999999999999999999999999866666 7999999999999 9999999999999999999


Q ss_pred             HHHHHHhhhc--cCceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHH
Q 040465          191 IVVGVISILT--SRKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVS  255 (594)
Q Consensus       191 vv~G~~~l~~--~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~  255 (594)
                      ++++.+.++.  -++|+...-+++  +...+..++++....+.|||-|+.||..++.+|..|+...+
T Consensus       301 ltvP~lvlig~~~g~pm~L~f~~~--e~vlL~ltv~v~~~t~~dGrsN~LeG~~hL~lf~~y~~l~~  365 (366)
T PRK10599        301 LTVPVVTLIAFLTGNELQFGLGAP--EMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIF  365 (366)
T ss_pred             HHHHHHHHHHHHhCCCeEecCCHH--HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            9999887763  246888776665  56655566566566678999999999999999999998653


No 27 
>KOG2399 consensus K+-dependent Na+:Ca2+ antiporter [Inorganic ion transport and metabolism]
Probab=98.83  E-value=3.4e-08  Score=110.60  Aligned_cols=131  Identities=22%  Similarity=0.384  Sum_probs=100.8

Q ss_pred             HhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHHHHHHHHHHhhhcc--
Q 040465          124 TAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFVSSIVVGVISILTS--  201 (594)
Q Consensus       124 ~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~~~vv~G~~~l~~~--  201 (594)
                      ..+.=.+.-++.++..+|+||++.|+|++|+|||.-|+++.+.-+++ |.+.+|.+.++|+.+||+.+.+|+...+..  
T Consensus       461 ~~A~Eiv~vl~~lG~I~~ls~siLGLTv~AWgNSiGDLIAniavak~-G~p~MAmaac~GGplfn~lvg~G~~~~i~~~~  539 (605)
T KOG2399|consen  461 LIANELVAVLTMLGVIFGLSPSILGLTVLAWGNSIGDLIANIAVAKQ-GYPRMAMAACIGGPLFNLLVGLGLPLVISSLQ  539 (605)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccHHHHHHHHHHHHc-CcHHHHHHHHhhhHHHHHHHHhhHHHHHHHHh
Confidence            34444678899999999999999999999999999999999999888 889999999999999999999999887731  


Q ss_pred             Cceeee--CCchHHH-HHHHHHHHHHHHHHH--HHcCcchHHHHHHHHHHHHHHHHHHH
Q 040465          202 RKEFSV--DKPSFIR-DVLFFLFSLCALILI--IVIGEINLWASICFVSIYLIYVLAVS  255 (594)
Q Consensus       202 ~~~~~v--~~~~~~r-d~~f~l~a~~~l~~~--l~~g~i~~~~~~~ll~~Y~~Yv~~~~  255 (594)
                      ++|.+.  .-+...+ -..|+.++.+..++.  ..+-++.+..|+.++.+|++|.++..
T Consensus       540 ~~~~~~~~~~~~~l~~~~~fL~i~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~~~~~  598 (605)
T KOG2399|consen  540 GKPGNIVIPEDNSLRITLIFLLIGLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFTLIFI  598 (605)
T ss_pred             cCCCceecccCCceehhHHHHHHHHHHHHHHHhcccceeccchhhHHHHHHHHHHHHHH
Confidence            233331  1122233 344444554444433  34678999999999999999954443


No 28 
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=98.80  E-value=8.2e-08  Score=100.75  Aligned_cols=144  Identities=15%  Similarity=0.301  Sum_probs=120.1

Q ss_pred             HHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHHHH
Q 040465          109 VLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAFFV  188 (594)
Q Consensus       109 ~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~if~  188 (594)
                      ....||+...... ...+|+++..+|...+.+|.|+.+.|+++.++-..+||..+++.+.++ |+-|.+++-..||.+..
T Consensus       221 ~s~~vLl~~tv~v-~~lae~lv~~le~~l~~~g~~~~F~G~iIa~lVgn~~E~~tAi~aA~~-~~mqls~nia~Gsalq~  298 (368)
T COG0387         221 LSTGVLLIATVLV-ALLAEILVGSLEAVLESLGAPPAFVGLIIAALVGNAPEHLTALRAALN-NRMQLSMNIAMGSALQT  298 (368)
T ss_pred             HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhccCHHHHHHHHHHHh-ccHHHHHHHHHHHHHHH
Confidence            4455555555544 346899999999999999999999999999999678999999999999 99999999999999999


Q ss_pred             HHHHHHHHhhhc--cCceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHH
Q 040465          189 SSIVVGVISILT--SRKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVSA  256 (594)
Q Consensus       189 ~~vv~G~~~l~~--~~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~  256 (594)
                      ..+.++...+++  .++|+...-.  -.|...+..++++..+...|||-++.||..++.+|.+|+...++
T Consensus       299 ~lltiP~lvlis~~~gqpm~l~~~--~~elV~l~~~v~~~~~~~sdG~sn~leG~~lL~lya~~~~~ff~  366 (368)
T COG0387         299 ALLTIPVLVLISLFTGQPLTLGFG--PPELVLLVVTVFLANILFSDGRTNWLEGVVLLALYAIYAMLFFF  366 (368)
T ss_pred             HHHHHHHHHHHHHHhCCCccccCC--HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            998888766552  2367766544  45888888888888888999999999999999999999876553


No 29 
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=98.80  E-value=2.9e-08  Score=103.52  Aligned_cols=150  Identities=19%  Similarity=0.336  Sum_probs=127.0

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhh
Q 040465          103 PILGHLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVL  182 (594)
Q Consensus       103 ~~~~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~ii  182 (594)
                      +.++..-.+.|++......+ ..+||++..+|..++.+++|+.+.|+|++++-..+.|-..++.-+.+ |+-|+++|-.+
T Consensus       284 p~is~~ss~~~L~~~T~~vs-llaeyLV~~Id~~~ds~~ls~~FiglillpiVgNaaEh~~AI~fA~k-~kldLslgVai  361 (441)
T KOG1397|consen  284 PNISRWSSIIWLLIMTLLVS-LLAEYLVDTIDDVSDSWGLSVKFIGLILLPIVGNAAEHAGAISFAMK-DKLDLSLGVAI  361 (441)
T ss_pred             CcchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCChhhheeeeecccCchHHhhcceeeeec-Ccccchhhhhh
Confidence            55666677888876666663 47899999999999999999999999999998889999999988888 89999999999


Q ss_pred             hhHHHHHHHHHHHHhhhcc--CceeeeCCchHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHH
Q 040465          183 GGAFFVSSIVVGVISILTS--RKEFSVDKPSFIRDVLFFLFSLCALILIIVIGEINLWASICFVSIYLIYVLAVSA  256 (594)
Q Consensus       183 Gs~if~~~vv~G~~~l~~~--~~~~~v~~~~~~rd~~f~l~a~~~l~~~l~~g~i~~~~~~~ll~~Y~~Yv~~~~~  256 (594)
                      ||++.+.+++++...++..  +.++.++-..  -|...++++++++.+++.||+-++.+|..++++|++-+.-.++
T Consensus       362 gsalQI~Lf~vP~~v~v~W~~g~~M~LnF~~--~et~~l~isVfl~~y~lqdG~Sny~kG~mLll~Y~Iia~~Ff~  435 (441)
T KOG1397|consen  362 GSALQIALFVVPFSVIVGWIMGISMDLNFPL--LETACLFISVFLVAYLLQDGKSNYFKGLMLLLCYLIIAAGFFV  435 (441)
T ss_pred             hhhHhHHHhhhhHHHHhhhhcCCceEEeccH--HHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999998777643  2455555444  4888888999999999999999999999999999887665544


No 30 
>KOG1306 consensus Ca2+/Na+ exchanger NCX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.74  E-value=8.4e-09  Score=109.95  Aligned_cols=157  Identities=23%  Similarity=0.394  Sum_probs=117.4

Q ss_pred             eeeecccCCC---chHHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhh
Q 040465           93 QIFYCTCGQF---PILGHLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFT  169 (594)
Q Consensus        93 ~l~yC~~~~~---~~~~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~  169 (594)
                      -+|.|..+.+   .+..+++.++.+.++-..+|..|+.|        +-..|+.+++..+|++|+|||.||.|++-+|+.
T Consensus       414 ~lFAfvPPt~~~~Gw~cFvvsi~~Igl~ta~igd~as~f--------gC~vglkdsVtA~~~vA~GTS~PDtfASkiAA~  485 (596)
T KOG1306|consen  414 VLFAFVPPTEICHGWACFVVSILFIGLLTAVIGDLASHF--------GCTVGLKDSVTAVTFVALGTSVPDTFASKIAAE  485 (596)
T ss_pred             HHeeeCCchhhcCccHHHHHHHHHHHHHHHHHHHHHHhh--------ceeecCccceeeeeeehhcCCCcHHHHHHHHHh
Confidence            3556655544   46666777777777777777766665        557899999999999999999999999999998


Q ss_pred             cCCCCccchhhhhhhHHHHHHHHHHHHhhhc------cCceeeeCCchHHHHHHHHH-HHHHHHHHHHHc-----Cc---
Q 040465          170 RSDDGDVGLNSVLGGAFFVSSIVVGVISILT------SRKEFSVDKPSFIRDVLFFL-FSLCALILIIVI-----GE---  234 (594)
Q Consensus       170 ~~~~~~la~g~iiGs~if~~~vv~G~~~l~~------~~~~~~v~~~~~~rd~~f~l-~a~~~l~~~l~~-----g~---  234 (594)
                      ++...|-++||+.|||-.|..+.+|+.+.++      .+.||+++...+-..+..++ .+++.+..++++     |+   
T Consensus       486 ~d~~AD~~igNvTgSNaVNvflGiG~aW~iaavy~a~~g~~f~v~~g~l~FsvtlF~i~s~~~i~vl~~RR~~iggELGG  565 (596)
T KOG1306|consen  486 QDQTADASIGNVTGSNAVNVFLGIGLAWSIAAVYWAAQGEPFYVEAGTLAFSVTLFTIFSVVCIVVLVYRRPHIGGELGG  565 (596)
T ss_pred             hcccccccccceecccceeEEEeccHHHHHHHHHHHhcCceEEeccceeeeehHHHHHHHHHhheeeEEeccccCcccCC
Confidence            8667899999999999999999999988763      46789998776655554444 444444333332     22   


Q ss_pred             ---chHHHHHHHHHHHHHHHHHHHHH
Q 040465          235 ---INLWASICFVSIYLIYVLAVSAS  257 (594)
Q Consensus       235 ---i~~~~~~~ll~~Y~~Yv~~~~~~  257 (594)
                         -.+..+.+|+.++++|++.....
T Consensus       566 P~~~k~~ta~~fv~lW~~yv~~s~le  591 (596)
T KOG1306|consen  566 PRGWKLLTAALFVSLWLLYVLLSSLE  591 (596)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence               23557888999999998876543


No 31 
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=25.85  E-value=1.1e+02  Score=33.14  Aligned_cols=57  Identities=11%  Similarity=0.085  Sum_probs=43.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHH
Q 040465          104 ILGHLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASD  160 (594)
Q Consensus       104 ~~~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pe  160 (594)
                      ..+.+..+..++.+-+-+-..--++|..-++.+++++|+|+.-+.-.+.+++|+.|=
T Consensus       237 ai~ivg~Iai~LaGAfpmv~~i~k~f~kpl~~~G~~lgin~~s~aGli~sLAn~I~m  293 (372)
T PRK15086        237 AIEIVGSIAIVLAGAFPMVYLITKVFKKPLMKVGKLLGMNEVAAAGMVATLANNIPM  293 (372)
T ss_pred             HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            344555555555444444466789999999999999999998887788999998773


No 32 
>PF04346 EutH:  Ethanolamine utilisation protein, EutH;  InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=25.34  E-value=1.2e+02  Score=32.51  Aligned_cols=58  Identities=16%  Similarity=0.106  Sum_probs=43.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHH
Q 040465          104 ILGHLVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDV  161 (594)
Q Consensus       104 ~~~~~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel  161 (594)
                      ..+.+..+...+.+-+-+-..--++|.+-++.+++++|+|+.-+.-.+.+++|+.|=.
T Consensus       235 ~~~ivg~IaI~LaGAfPmv~~i~k~f~kpl~~lG~~lgin~~s~aGllaslAn~I~mf  292 (354)
T PF04346_consen  235 AIEIVGSIAIVLAGAFPMVYLITKVFKKPLEKLGKKLGINEVSAAGLLASLANNIPMF  292 (354)
T ss_pred             HHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence            4444555555554444444667899999999999999999988877899999998743


No 33 
>PRK13875 conjugal transfer protein TrbL; Provisional
Probab=23.10  E-value=7.7e+02  Score=27.42  Aligned_cols=102  Identities=25%  Similarity=0.425  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhHhhhhhHHHHHHHhCCCcchhhHHHHhhccChHHHHHHHHHhhcCCCCccchhhhhhhHH-
Q 040465          108 LVLLLWLVVLFYLLGNTAASYFCSSLESLSRILKLPPTIAGVTLLALGNGASDVFSSIVSFTRSDDGDVGLNSVLGGAF-  186 (594)
Q Consensus       108 ~~~~l~l~~lf~~L~~~a~~~f~~~l~~is~~l~ls~~vaGvTllAlGns~Pel~~si~a~~~~~~~~la~g~iiGs~i-  186 (594)
                      ++++.|+++++... +.+.+.|+--+|   -++   -+.+|+.+++||-+-.--+-+          +=.+++++++.+ 
T Consensus       144 vl~la~liVLLaF~-iIAvqmfvtLIE---fyl---~tlAG~iLLpFGg~~wTsf~A----------ek~lg~Vis~GiK  206 (440)
T PRK13875        144 VLLLAWLLVLLAFF-ILAIQLFVTLIE---FKL---TTLAGFVLIPFALFGKTAFLA----------ERVLGNVVSSGIK  206 (440)
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHH---HHH---HHhhHHHhhccccchhhHHHH----------HHHHHHHHHHHHH
Confidence            34566665444322 456666654332   233   456999999999763222211          224677777775 


Q ss_pred             -HHHHHHHHHHhhhccCceee--eC-CchHHHHHHHHHHHHHHHHH
Q 040465          187 -FVSSIVVGVISILTSRKEFS--VD-KPSFIRDVLFFLFSLCALIL  228 (594)
Q Consensus       187 -f~~~vv~G~~~l~~~~~~~~--v~-~~~~~rd~~f~l~a~~~l~~  228 (594)
                       ++..+++|+.--+.  ..+.  .. ..+.+.|...++++.+.+..
T Consensus       207 LmVLalIVGIG~tlf--~~~~~~~~~~~ptl~e~~~i~laal~ll~  250 (440)
T PRK13875        207 VLVLAVIVGIGSTLF--SQFTAGFGGAEPTIDDAMAIVLAALSLLG  250 (440)
T ss_pred             HHHHHHHHHHhHHHH--HHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence             77777777633221  1121  22 24556777777665554443


Done!