Query 040467
Match_columns 387
No_of_seqs 138 out of 1282
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 13:56:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040467.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040467hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 7.8E-55 2.7E-59 406.3 32.8 349 4-387 12-370 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 2E-50 6.9E-55 384.1 30.7 365 2-387 5-396 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 8E-49 2.7E-53 371.9 35.8 357 4-387 5-382 (480)
4 2acv_A Triterpene UDP-glucosyl 100.0 1.9E-48 6.3E-53 368.0 30.6 348 4-387 8-375 (463)
5 2c1x_A UDP-glucose flavonoid 3 100.0 1.2E-47 4.1E-52 361.5 32.2 351 3-387 5-368 (456)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.7E-37 5.7E-42 291.8 24.5 325 2-387 9-346 (424)
7 4amg_A Snogd; transferase, pol 100.0 6.1E-36 2.1E-40 279.0 19.9 297 5-387 22-329 (400)
8 1iir_A Glycosyltransferase GTF 100.0 3.2E-34 1.1E-38 268.5 20.9 309 6-387 1-326 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 8.6E-34 2.9E-38 265.7 16.5 314 6-387 1-327 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 3.4E-33 1.2E-37 260.4 19.3 295 6-387 1-309 (404)
11 3ia7_A CALG4; glycosysltransfe 100.0 7.4E-32 2.5E-36 251.5 25.7 311 6-387 5-322 (402)
12 3rsc_A CALG2; TDP, enediyne, s 100.0 3.7E-32 1.3E-36 254.7 22.3 309 5-387 20-338 (415)
13 2iyf_A OLED, oleandomycin glyc 100.0 9.3E-31 3.2E-35 246.3 23.3 314 3-387 5-324 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 1.1E-30 3.8E-35 246.4 15.5 305 5-387 20-360 (441)
15 2p6p_A Glycosyl transferase; X 100.0 6.9E-29 2.4E-33 230.0 19.4 288 6-387 1-304 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 3.7E-28 1.3E-32 226.2 21.8 291 5-387 20-324 (398)
17 4fzr_A SSFS6; structural genom 100.0 1.1E-28 3.8E-33 229.7 13.9 294 4-387 14-325 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 99.9 4.5E-27 1.5E-31 218.3 16.0 292 5-387 1-311 (391)
19 3otg_A CALG1; calicheamicin, T 99.9 2.4E-24 8.2E-29 201.3 22.3 296 4-387 19-333 (412)
20 3s2u_A UDP-N-acetylglucosamine 99.8 1E-19 3.4E-24 166.7 22.1 265 6-386 3-276 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.8 3.2E-18 1.1E-22 139.4 9.9 106 261-387 5-111 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.6 1.8E-14 6.1E-19 132.0 21.2 265 6-387 7-279 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.2 3.1E-09 1.1E-13 92.5 20.1 91 277-386 157-248 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.1 1.4E-10 4.9E-15 96.8 9.6 99 275-387 26-157 (224)
25 3okp_A GDP-mannose-dependent a 98.9 6.4E-07 2.2E-11 82.2 25.3 280 2-387 1-308 (394)
26 3fro_A GLGA glycogen synthase; 98.8 5.1E-07 1.7E-11 84.1 21.2 317 4-387 1-359 (439)
27 3c48_A Predicted glycosyltrans 98.7 3E-06 1E-10 79.1 23.4 120 4-147 19-154 (438)
28 1v4v_A UDP-N-acetylglucosamine 98.7 7.9E-07 2.7E-11 81.3 18.6 93 277-387 198-298 (376)
29 2iuy_A Avigt4, glycosyltransfe 98.7 1.6E-07 5.4E-12 84.8 13.6 90 280-387 164-270 (342)
30 2r60_A Glycosyl transferase, g 98.7 5.5E-07 1.9E-11 85.7 16.8 126 2-148 4-153 (499)
31 2gek_A Phosphatidylinositol ma 98.7 2.1E-06 7.2E-11 79.1 19.5 113 4-145 19-137 (406)
32 1vgv_A UDP-N-acetylglucosamine 98.6 2.3E-06 7.7E-11 78.4 18.2 94 277-387 205-306 (384)
33 3dzc_A UDP-N-acetylglucosamine 98.5 1.9E-06 6.5E-11 79.3 15.2 115 3-144 23-141 (396)
34 3beo_A UDP-N-acetylglucosamine 98.5 6.3E-06 2.2E-10 75.1 18.5 115 2-144 5-125 (375)
35 3ot5_A UDP-N-acetylglucosamine 98.5 2E-06 6.7E-11 79.4 13.7 115 3-144 25-144 (403)
36 2jjm_A Glycosyl transferase, g 98.4 0.00027 9.1E-09 64.7 26.6 282 5-387 15-313 (394)
37 2x6q_A Trehalose-synthase TRET 98.3 7.5E-05 2.6E-09 69.0 21.0 43 2-45 37-81 (416)
38 4hwg_A UDP-N-acetylglucosamine 98.0 0.00012 4E-09 66.9 15.0 280 9-387 12-306 (385)
39 2vsy_A XCC0866; transferase, g 97.9 0.0033 1.1E-07 60.5 24.3 42 344-387 434-481 (568)
40 2iw1_A Lipopolysaccharide core 97.9 0.00062 2.1E-08 61.6 17.3 51 7-65 2-55 (374)
41 1rzu_A Glycogen synthase 1; gl 97.9 0.00057 1.9E-08 64.4 17.3 37 6-43 1-43 (485)
42 2qzs_A Glycogen synthase; glyc 97.8 0.00052 1.8E-08 64.7 16.2 37 6-43 1-43 (485)
43 3s28_A Sucrose synthase 1; gly 97.6 0.0024 8.1E-08 63.7 17.9 127 5-147 278-439 (816)
44 3oy2_A Glycosyltransferase B73 97.2 0.07 2.4E-06 48.7 21.6 38 6-45 1-41 (413)
45 2hy7_A Glucuronosyltransferase 97.2 0.029 9.8E-07 51.5 18.0 43 343-387 264-320 (406)
46 3tov_A Glycosyl transferase fa 97.1 0.042 1.5E-06 49.2 18.2 105 5-143 8-115 (349)
47 1psw_A ADP-heptose LPS heptosy 96.8 0.13 4.4E-06 45.8 18.9 46 6-51 1-47 (348)
48 2f9f_A First mannosyl transfer 96.7 0.0044 1.5E-07 49.6 7.7 93 279-387 24-126 (177)
49 4gyw_A UDP-N-acetylglucosamine 96.7 0.0063 2.1E-07 60.2 9.5 100 276-387 521-627 (723)
50 3q3e_A HMW1C-like glycosyltran 96.5 0.01 3.5E-07 56.7 9.4 97 278-387 441-546 (631)
51 2xci_A KDO-transferase, 3-deox 96.3 0.36 1.2E-05 43.5 18.5 35 7-44 42-76 (374)
52 3qhp_A Type 1 capsular polysac 95.7 0.031 1.1E-06 43.8 7.5 92 278-387 2-104 (166)
53 2bfw_A GLGA glycogen synthase; 94.7 0.19 6.4E-06 40.5 9.4 41 345-387 96-144 (200)
54 2phj_A 5'-nucleotidase SURE; S 91.4 0.88 3E-05 38.1 8.4 56 6-64 2-57 (251)
55 3zqu_A Probable aromatic acid 89.2 0.48 1.6E-05 38.6 4.9 48 2-51 1-48 (209)
56 2wqk_A 5'-nucleotidase SURE; S 88.3 0.76 2.6E-05 38.7 5.7 42 7-51 3-44 (251)
57 4dim_A Phosphoribosylglycinami 88.3 1.7 5.9E-05 39.3 8.6 37 2-44 4-40 (403)
58 3q0i_A Methionyl-tRNA formyltr 88.3 3.1 0.00011 36.4 9.7 36 2-43 4-39 (318)
59 3vue_A GBSS-I, granule-bound s 88.0 0.31 1.1E-05 46.3 3.5 95 279-387 328-430 (536)
60 1g5t_A COB(I)alamin adenosyltr 87.9 5 0.00017 32.2 10.0 55 5-65 28-88 (196)
61 2x0d_A WSAF; GT4 family, trans 85.8 0.49 1.7E-05 43.3 3.4 40 4-44 45-89 (413)
62 3dfu_A Uncharacterized protein 85.7 4.1 0.00014 33.7 8.6 36 2-43 3-38 (232)
63 3qjg_A Epidermin biosynthesis 85.0 1.5 5.1E-05 34.6 5.4 44 6-51 6-49 (175)
64 3mcu_A Dipicolinate synthase, 85.0 0.94 3.2E-05 36.8 4.3 47 1-49 1-48 (207)
65 1j9j_A Stationary phase surviV 84.7 5.4 0.00018 33.3 8.9 43 7-52 2-44 (247)
66 2v4n_A Multifunctional protein 84.4 11 0.00036 31.7 10.6 43 6-51 2-44 (254)
67 3lqk_A Dipicolinate synthase s 83.2 1.5 5.3E-05 35.4 4.9 49 1-50 3-51 (201)
68 4dzz_A Plasmid partitioning pr 82.4 8.5 0.00029 30.6 9.3 37 8-45 3-41 (206)
69 2bw0_A 10-FTHFDH, 10-formyltet 82.1 6 0.0002 34.7 8.6 34 3-42 20-53 (329)
70 1ccw_A Protein (glutamate muta 81.9 1.8 6E-05 32.6 4.5 38 4-42 2-39 (137)
71 3iqw_A Tail-anchored protein t 80.9 9.8 0.00033 33.4 9.7 41 6-47 16-57 (334)
72 3vot_A L-amino acid ligase, BL 80.9 7.4 0.00025 35.4 9.3 99 1-141 1-101 (425)
73 1l5x_A SurviVal protein E; str 80.2 7.2 0.00025 33.2 8.2 55 7-64 2-56 (280)
74 2gt1_A Lipopolysaccharide hept 79.9 4 0.00014 35.6 6.9 46 6-51 1-47 (326)
75 2pn1_A Carbamoylphosphate synt 78.5 8.3 0.00028 33.6 8.6 34 3-43 2-37 (331)
76 1p3y_1 MRSD protein; flavoprot 78.0 1.7 5.9E-05 34.9 3.5 47 3-51 6-52 (194)
77 3vue_A GBSS-I, granule-bound s 76.9 5.3 0.00018 37.8 7.1 38 4-42 8-51 (536)
78 1sbz_A Probable aromatic acid 76.8 2.8 9.5E-05 33.7 4.4 44 6-51 1-45 (197)
79 3auf_A Glycinamide ribonucleot 76.6 24 0.00083 28.9 10.2 103 5-146 22-131 (229)
80 2x0d_A WSAF; GT4 family, trans 76.4 5.6 0.00019 36.1 7.0 43 343-387 294-343 (413)
81 1mvl_A PPC decarboxylase athal 75.9 4.4 0.00015 32.9 5.4 45 4-51 18-62 (209)
82 1g63_A Epidermin modifying enz 75.4 3.9 0.00013 32.3 4.9 43 7-51 4-46 (181)
83 1id1_A Putative potassium chan 74.0 2.2 7.7E-05 32.5 3.1 35 3-43 1-35 (153)
84 3hn2_A 2-dehydropantoate 2-red 72.3 6 0.0002 34.4 5.8 45 7-63 4-48 (312)
85 3ouz_A Biotin carboxylase; str 72.0 12 0.00041 34.3 8.1 35 1-43 4-38 (446)
86 1kjn_A MTH0777; hypotethical p 71.4 6.3 0.00022 29.7 4.7 47 6-53 7-55 (157)
87 1qzu_A Hypothetical protein MD 70.5 6.1 0.00021 32.0 5.0 48 3-51 17-64 (206)
88 1kjq_A GART 2, phosphoribosylg 70.4 36 0.0012 30.2 10.8 35 4-44 10-44 (391)
89 2qs7_A Uncharacterized protein 70.3 6.3 0.00022 29.8 4.8 48 2-51 6-53 (144)
90 1bg6_A N-(1-D-carboxylethyl)-L 69.7 3.3 0.00011 36.6 3.7 44 2-51 1-45 (359)
91 1o97_C Electron transferring f 69.3 19 0.00065 30.4 8.0 41 99-146 101-147 (264)
92 2yxb_A Coenzyme B12-dependent 69.2 5.1 0.00017 31.0 4.1 38 4-42 17-54 (161)
93 3tqr_A Phosphoribosylglycinami 68.5 19 0.00064 29.3 7.6 108 1-146 1-113 (215)
94 2ixd_A LMBE-related protein; h 68.4 19 0.00065 29.9 7.8 33 7-41 6-38 (242)
95 1efp_B ETF, protein (electron 68.0 23 0.00078 29.6 8.2 40 100-146 103-148 (252)
96 3rfo_A Methionyl-tRNA formyltr 66.7 54 0.0018 28.4 10.6 34 5-44 4-37 (317)
97 1fmt_A Methionyl-tRNA FMet for 66.7 28 0.00095 30.2 8.8 33 4-42 2-34 (314)
98 1y80_A Predicted cobalamin bin 66.5 8 0.00027 31.3 5.0 39 5-44 88-126 (210)
99 3dm5_A SRP54, signal recogniti 66.5 31 0.0011 31.6 9.3 41 6-47 101-141 (443)
100 2ywr_A Phosphoribosylglycinami 65.6 35 0.0012 27.6 8.7 102 6-146 2-110 (216)
101 3bgw_A DNAB-like replicative h 65.2 11 0.00037 34.7 6.1 43 7-50 199-241 (444)
102 3ghy_A Ketopantoate reductase 65.2 5.3 0.00018 35.1 3.9 41 5-51 3-43 (335)
103 3l4e_A Uncharacterized peptida 64.8 9.8 0.00034 30.7 5.2 48 265-312 16-63 (206)
104 3mc3_A DSRE/DSRF-like family p 64.7 12 0.0004 27.8 5.2 34 15-49 28-61 (134)
105 3da8_A Probable 5'-phosphoribo 64.5 13 0.00045 30.2 5.8 104 4-145 11-118 (215)
106 3i83_A 2-dehydropantoate 2-red 64.3 7 0.00024 34.0 4.6 39 6-51 3-41 (320)
107 2q6t_A DNAB replication FORK h 63.7 12 0.00041 34.4 6.2 44 7-50 202-245 (444)
108 2ejb_A Probable aromatic acid 63.5 8.1 0.00028 30.8 4.4 43 7-51 3-45 (189)
109 3io3_A DEHA2D07832P; chaperone 62.5 22 0.00077 31.3 7.5 39 6-45 18-59 (348)
110 3kcq_A Phosphoribosylglycinami 62.3 61 0.0021 26.2 10.0 101 2-146 5-112 (215)
111 2i2x_B MTAC, methyltransferase 61.9 11 0.00037 31.7 5.1 38 4-42 122-159 (258)
112 3rhz_A GTF3, nucleotide sugar 61.7 4.1 0.00014 36.0 2.5 44 343-387 214-269 (339)
113 2r8r_A Sensor protein; KDPD, P 61.5 12 0.00041 30.7 5.1 39 5-44 6-44 (228)
114 4ds3_A Phosphoribosylglycinami 61.2 20 0.00069 29.0 6.4 105 3-146 5-116 (209)
115 2gt1_A Lipopolysaccharide hept 61.2 7.6 0.00026 33.8 4.2 93 277-387 178-277 (326)
116 3av3_A Phosphoribosylglycinami 60.9 64 0.0022 26.0 10.0 101 7-146 5-112 (212)
117 2zbw_A Thioredoxin reductase; 60.4 5.6 0.00019 34.6 3.2 37 1-43 1-37 (335)
118 3n7t_A Macrophage binding prot 59.2 20 0.00068 29.9 6.2 37 6-43 10-57 (247)
119 1jkx_A GART;, phosphoribosylgl 59.1 69 0.0024 25.8 10.1 101 7-146 2-109 (212)
120 1c0p_A D-amino acid oxidase; a 58.9 8.5 0.00029 34.0 4.2 35 1-41 2-36 (363)
121 3tqq_A Methionyl-tRNA formyltr 57.7 50 0.0017 28.6 8.7 32 6-43 3-34 (314)
122 1y56_B Sarcosine oxidase; dehy 57.7 6.3 0.00022 35.1 3.1 36 1-42 1-36 (382)
123 2qyt_A 2-dehydropantoate 2-red 57.3 4.9 0.00017 34.8 2.3 34 3-42 6-45 (317)
124 2b8t_A Thymidine kinase; deoxy 57.1 68 0.0023 26.1 9.0 38 7-45 13-51 (223)
125 3ih5_A Electron transfer flavo 56.9 44 0.0015 27.1 7.8 106 7-144 5-121 (217)
126 3ezx_A MMCP 1, monomethylamine 56.6 16 0.00056 29.7 5.1 38 4-42 91-128 (215)
127 3k96_A Glycerol-3-phosphate de 56.1 7.2 0.00025 34.7 3.2 44 2-51 26-70 (356)
128 3mjf_A Phosphoribosylamine--gl 55.8 28 0.00096 31.7 7.2 34 6-45 4-37 (431)
129 1psw_A ADP-heptose LPS heptosy 55.0 99 0.0034 26.6 10.6 45 6-51 181-230 (348)
130 4b4o_A Epimerase family protei 54.7 9.4 0.00032 32.6 3.7 32 6-42 1-32 (298)
131 3ius_A Uncharacterized conserv 54.4 15 0.00052 30.9 4.9 49 6-65 6-55 (286)
132 2xvy_A Chelatase, putative; me 54.2 30 0.001 29.0 6.7 39 277-315 10-50 (269)
133 4e21_A 6-phosphogluconate dehy 53.9 8.4 0.00029 34.2 3.2 35 2-42 19-53 (358)
134 1jx7_A Hypothetical protein YC 53.3 21 0.00073 25.3 4.9 46 5-51 3-51 (117)
135 1wcv_1 SOJ, segregation protei 52.7 13 0.00043 31.1 4.0 44 1-45 1-46 (257)
136 3pdi_B Nitrogenase MOFE cofact 52.6 45 0.0015 30.6 8.0 34 101-144 366-399 (458)
137 2vou_A 2,6-dihydroxypyridine h 52.0 12 0.00041 33.5 4.0 35 1-41 1-35 (397)
138 2yrx_A Phosphoribosylglycinami 51.9 1.2E+02 0.004 27.6 10.8 35 3-42 19-53 (451)
139 2dwc_A PH0318, 433AA long hypo 51.8 1.3E+02 0.0046 26.9 11.7 35 5-45 19-53 (433)
140 3hwr_A 2-dehydropantoate 2-red 51.3 11 0.00038 32.7 3.5 41 5-51 19-59 (318)
141 4g6h_A Rotenone-insensitive NA 50.8 10 0.00035 35.5 3.4 35 4-44 41-75 (502)
142 3tov_A Glycosyl transferase fa 50.6 58 0.002 28.5 8.2 45 6-51 186-234 (349)
143 3enk_A UDP-glucose 4-epimerase 50.6 14 0.00046 32.2 4.1 37 1-42 1-37 (341)
144 2w70_A Biotin carboxylase; lig 49.7 75 0.0026 28.8 9.2 30 7-42 4-33 (449)
145 2lpm_A Two-component response 49.3 13 0.00043 27.2 3.0 29 117-145 53-86 (123)
146 3cky_A 2-hydroxymethyl glutara 49.3 18 0.00062 30.8 4.6 35 2-42 1-35 (301)
147 1lss_A TRK system potassium up 48.9 13 0.00043 27.3 3.1 32 5-42 4-35 (140)
148 3qha_A Putative oxidoreductase 48.2 11 0.00039 32.2 3.1 41 5-51 15-56 (296)
149 3kkl_A Probable chaperone prot 48.2 31 0.0011 28.6 5.7 40 1-43 1-51 (244)
150 2qk4_A Trifunctional purine bi 48.1 96 0.0033 28.2 9.6 33 5-42 24-56 (452)
151 3kjh_A CO dehydrogenase/acetyl 48.1 16 0.00054 30.0 4.0 36 7-43 2-37 (254)
152 3gpi_A NAD-dependent epimerase 47.4 20 0.00067 30.3 4.5 31 6-42 4-34 (286)
153 4egb_A DTDP-glucose 4,6-dehydr 47.3 1.4E+02 0.0046 25.7 10.6 34 3-41 22-57 (346)
154 4huj_A Uncharacterized protein 47.2 11 0.00038 30.6 2.8 34 3-42 21-54 (220)
155 3to5_A CHEY homolog; alpha(5)b 47.2 34 0.0012 25.2 5.2 32 117-148 57-97 (134)
156 2yvq_A Carbamoyl-phosphate syn 47.2 43 0.0015 25.0 5.8 97 9-144 27-131 (143)
157 4e12_A Diketoreductase; oxidor 47.1 17 0.00059 30.8 4.1 35 2-42 1-35 (283)
158 1ehi_A LMDDL2, D-alanine:D-lac 46.8 20 0.00068 32.0 4.6 37 4-41 2-43 (377)
159 4hb9_A Similarities with proba 46.5 14 0.00049 32.9 3.7 29 6-40 2-30 (412)
160 2g1u_A Hypothetical protein TM 46.4 25 0.00085 26.5 4.5 33 5-43 19-51 (155)
161 3r5x_A D-alanine--D-alanine li 45.5 37 0.0013 28.9 6.0 46 5-51 3-52 (307)
162 2bln_A Protein YFBG; transfera 45.4 55 0.0019 28.2 7.0 32 6-43 1-32 (305)
163 1u94_A RECA protein, recombina 45.1 95 0.0032 27.3 8.6 38 7-45 65-102 (356)
164 2r85_A PURP protein PF1517; AT 44.4 20 0.00069 31.0 4.2 34 5-45 2-35 (334)
165 3dme_A Conserved exported prot 44.2 15 0.00051 32.2 3.3 35 2-42 1-35 (369)
166 3r6d_A NAD-dependent epimerase 43.8 23 0.00079 28.4 4.2 20 22-42 18-38 (221)
167 3f5d_A Protein YDEA; unknow pr 43.6 23 0.00078 28.5 4.0 41 1-45 1-42 (206)
168 1rw7_A YDR533CP; alpha-beta sa 43.6 48 0.0016 27.3 6.2 41 1-44 1-52 (243)
169 3hr8_A Protein RECA; alpha and 43.2 1.2E+02 0.0042 26.6 9.0 37 8-45 64-100 (356)
170 2d1p_B TUSC, hypothetical UPF0 43.2 34 0.0012 24.5 4.6 42 3-46 1-44 (119)
171 3gl9_A Response regulator; bet 43.1 42 0.0014 23.6 5.2 31 117-147 46-85 (122)
172 1uan_A Hypothetical protein TT 43.1 96 0.0033 25.2 7.9 21 97-124 82-102 (227)
173 3fwz_A Inner membrane protein 42.9 14 0.00046 27.5 2.4 33 5-43 7-39 (140)
174 1xp8_A RECA protein, recombina 42.8 82 0.0028 27.9 7.9 38 7-45 76-113 (366)
175 2pv7_A T-protein [includes: ch 42.6 96 0.0033 26.3 8.2 31 7-43 23-54 (298)
176 2ew2_A 2-dehydropantoate 2-red 42.6 18 0.00062 31.0 3.6 40 6-51 4-44 (316)
177 2wm1_A 2-amino-3-carboxymucona 42.5 14 0.00049 32.1 2.9 74 232-314 103-176 (336)
178 3o1l_A Formyltetrahydrofolate 42.1 1.6E+02 0.0056 25.1 12.5 105 3-146 103-211 (302)
179 4h15_A Short chain alcohol deh 41.1 37 0.0013 28.4 5.1 33 5-41 10-42 (261)
180 1e4e_A Vancomycin/teicoplanin 41.0 22 0.00076 31.1 3.9 38 4-42 2-43 (343)
181 3llv_A Exopolyphosphatase-rela 41.0 17 0.00059 26.8 2.8 31 6-42 7-37 (141)
182 3lrx_A Putative hydrogenase; a 40.7 23 0.0008 26.9 3.5 32 6-40 24-55 (158)
183 4gi5_A Quinone reductase; prot 40.6 41 0.0014 28.5 5.3 38 3-41 20-60 (280)
184 3zzm_A Bifunctional purine bio 39.4 60 0.0021 30.0 6.4 101 6-128 10-113 (523)
185 1fy2_A Aspartyl dipeptidase; s 39.4 36 0.0012 27.8 4.7 46 264-311 21-66 (229)
186 2ip4_A PURD, phosphoribosylami 39.4 1.4E+02 0.0047 26.7 9.1 32 6-42 1-32 (417)
187 2fb6_A Conserved hypothetical 39.1 36 0.0012 24.5 4.1 40 3-43 5-48 (117)
188 2hy5_B Intracellular sulfur ox 39.1 41 0.0014 24.9 4.5 35 11-46 12-48 (136)
189 1vdc_A NTR, NADPH dependent th 38.9 12 0.00041 32.4 1.8 34 3-42 6-39 (333)
190 2qv7_A Diacylglycerol kinase D 38.8 43 0.0015 29.2 5.4 41 1-44 22-65 (337)
191 3pnx_A Putative sulfurtransfer 38.6 60 0.002 24.9 5.5 45 6-51 6-50 (160)
192 3g0o_A 3-hydroxyisobutyrate de 38.6 21 0.0007 30.7 3.2 33 4-42 6-38 (303)
193 2zki_A 199AA long hypothetical 38.5 32 0.0011 27.1 4.2 36 6-43 5-41 (199)
194 1xgk_A Nitrogen metabolite rep 38.5 27 0.00094 30.7 4.1 37 1-42 1-37 (352)
195 2q5c_A NTRC family transcripti 38.3 37 0.0013 27.0 4.5 45 100-151 129-173 (196)
196 3dhn_A NAD-dependent epimerase 38.3 36 0.0012 27.3 4.6 33 6-43 5-37 (227)
197 1pno_A NAD(P) transhydrogenase 38.1 36 0.0012 26.2 3.9 39 5-44 23-64 (180)
198 3lp8_A Phosphoribosylamine-gly 38.0 88 0.003 28.4 7.6 30 5-40 21-51 (442)
199 3g17_A Similar to 2-dehydropan 37.7 11 0.00037 32.4 1.2 31 7-43 4-34 (294)
200 2uyy_A N-PAC protein; long-cha 37.7 23 0.0008 30.5 3.5 35 2-42 27-61 (316)
201 1d4o_A NADP(H) transhydrogenas 37.3 37 0.0013 26.2 3.9 38 6-44 23-63 (184)
202 2i87_A D-alanine-D-alanine lig 37.2 22 0.00076 31.4 3.3 38 4-42 2-43 (364)
203 4eso_A Putative oxidoreductase 37.1 38 0.0013 28.0 4.6 33 6-42 8-40 (255)
204 2vo1_A CTP synthase 1; pyrimid 36.6 32 0.0011 28.9 3.8 43 3-46 20-65 (295)
205 1u8x_X Maltose-6'-phosphate gl 36.2 26 0.00089 32.4 3.6 39 1-44 24-67 (472)
206 2hbv_A 2-amino-3-carboxymucona 36.2 40 0.0014 29.2 4.8 73 232-314 107-179 (334)
207 2hy5_A Putative sulfurtransfer 36.1 53 0.0018 23.9 4.8 38 10-48 6-46 (130)
208 1f0y_A HCDH, L-3-hydroxyacyl-C 36.0 27 0.00093 29.8 3.6 32 6-43 16-47 (302)
209 3ic5_A Putative saccharopine d 35.9 33 0.0011 23.9 3.6 31 6-42 6-37 (118)
210 2bi7_A UDP-galactopyranose mut 35.8 28 0.00097 31.0 3.8 33 4-42 2-34 (384)
211 1evy_A Glycerol-3-phosphate de 35.8 22 0.00074 31.5 3.0 31 7-43 17-47 (366)
212 2fsv_C NAD(P) transhydrogenase 35.7 40 0.0014 26.6 3.9 38 6-44 47-87 (203)
213 1hjr_A Holliday junction resol 35.5 63 0.0022 24.7 5.2 44 96-146 45-103 (158)
214 3ty2_A 5'-nucleotidase SURE; s 35.5 47 0.0016 27.8 4.7 46 3-51 9-54 (261)
215 2iz6_A Molybdenum cofactor car 35.5 1.3E+02 0.0044 23.4 7.0 41 346-386 91-135 (176)
216 3cmw_A Protein RECA, recombina 35.0 2.2E+02 0.0075 31.1 10.7 41 7-48 385-425 (1706)
217 4e5s_A MCCFLIKE protein (BA_56 34.9 52 0.0018 28.7 5.2 28 290-317 62-89 (331)
218 3irs_A Uncharacterized protein 34.8 35 0.0012 29.0 4.1 78 227-315 80-160 (291)
219 1djl_A Transhydrogenase DIII; 34.8 42 0.0014 26.5 3.9 38 6-44 46-86 (207)
220 2x3n_A Probable FAD-dependent 34.7 24 0.00081 31.5 3.1 32 4-41 5-36 (399)
221 4dgk_A Phytoene dehydrogenase; 34.3 18 0.00062 33.5 2.3 29 7-41 3-31 (501)
222 2gk4_A Conserved hypothetical 34.3 31 0.001 28.4 3.4 26 16-44 28-53 (232)
223 3lk7_A UDP-N-acetylmuramoylala 34.2 71 0.0024 29.2 6.3 33 4-42 8-40 (451)
224 4ezb_A Uncharacterized conserv 34.2 30 0.001 30.0 3.5 32 6-43 25-57 (317)
225 4h1h_A LMO1638 protein; MCCF-l 33.9 48 0.0016 28.9 4.8 28 290-317 62-89 (327)
226 3eag_A UDP-N-acetylmuramate:L- 33.8 42 0.0014 29.1 4.5 47 6-62 5-54 (326)
227 1trb_A Thioredoxin reductase; 33.7 20 0.00067 30.7 2.3 35 1-41 1-35 (320)
228 1hdo_A Biliverdin IX beta redu 33.7 39 0.0013 26.4 4.0 32 6-42 4-35 (206)
229 4dll_A 2-hydroxy-3-oxopropiona 33.5 48 0.0017 28.6 4.8 32 5-42 31-62 (320)
230 1f9y_A HPPK, protein (6-hydrox 33.4 49 0.0017 25.3 4.2 28 279-306 2-29 (158)
231 2qx0_A 7,8-dihydro-6-hydroxyme 33.3 66 0.0023 24.6 4.9 28 279-306 3-30 (159)
232 2rdm_A Response regulator rece 33.3 83 0.0028 22.1 5.5 37 1-42 1-37 (132)
233 3bfv_A CAPA1, CAPB2, membrane 33.1 48 0.0017 27.8 4.6 39 4-43 80-120 (271)
234 3qsg_A NAD-binding phosphogluc 33.0 25 0.00085 30.4 2.8 33 4-42 23-56 (312)
235 3bul_A Methionine synthase; tr 32.7 52 0.0018 31.3 5.1 39 5-44 98-136 (579)
236 2xcl_A Phosphoribosylamine--gl 32.5 1.5E+02 0.0052 26.4 8.2 32 6-42 1-32 (422)
237 3t6k_A Response regulator rece 32.2 76 0.0026 22.7 5.2 32 117-148 48-88 (136)
238 3sr3_A Microcin immunity prote 32.1 56 0.0019 28.6 4.9 27 291-317 64-90 (336)
239 2rir_A Dipicolinate synthase, 32.1 57 0.0019 27.8 5.0 34 2-41 4-37 (300)
240 3u7q_B Nitrogenase molybdenum- 32.1 3.2E+02 0.011 25.5 11.4 34 101-144 429-469 (523)
241 3i12_A D-alanine-D-alanine lig 32.1 38 0.0013 30.0 3.9 39 3-42 1-43 (364)
242 3lyu_A Putative hydrogenase; t 32.0 34 0.0012 25.5 3.1 32 6-40 19-50 (142)
243 3lyh_A Cobalamin (vitamin B12) 31.9 69 0.0024 23.0 4.8 37 277-313 6-42 (126)
244 3uce_A Dehydrogenase; rossmann 31.8 45 0.0015 26.8 4.1 37 1-41 1-37 (223)
245 3ew7_A LMO0794 protein; Q8Y8U8 31.6 38 0.0013 26.9 3.7 32 7-43 2-33 (221)
246 1ks9_A KPA reductase;, 2-dehyd 31.4 40 0.0014 28.3 3.9 30 7-42 2-31 (291)
247 3g79_A NDP-N-acetyl-D-galactos 31.4 43 0.0015 31.0 4.2 35 3-43 16-52 (478)
248 2e6c_A 5'-nucleotidase SURE; S 31.3 1E+02 0.0035 25.5 6.1 56 7-65 2-57 (244)
249 3f6p_A Transcriptional regulat 31.3 86 0.0029 21.7 5.2 31 117-147 46-82 (120)
250 3la6_A Tyrosine-protein kinase 31.2 44 0.0015 28.4 4.0 39 5-44 91-131 (286)
251 1qgu_B Protein (nitrogenase mo 31.2 3.3E+02 0.011 25.4 11.1 34 101-144 425-465 (519)
252 3m6m_D Sensory/regulatory prot 31.2 57 0.002 23.7 4.3 31 117-147 58-99 (143)
253 3qbc_A 2-amino-4-hydroxy-6-hyd 31.1 61 0.0021 24.9 4.3 28 278-305 5-32 (161)
254 2bru_C NAD(P) transhydrogenase 30.9 42 0.0014 25.9 3.3 38 6-44 31-71 (186)
255 4hcj_A THIJ/PFPI domain protei 30.8 94 0.0032 24.1 5.6 41 2-44 4-45 (177)
256 3v76_A Flavoprotein; structura 30.7 27 0.00093 31.6 2.8 35 1-41 23-57 (417)
257 1qyd_A Pinoresinol-lariciresin 30.7 43 0.0015 28.4 4.0 33 6-43 5-37 (313)
258 3tpc_A Short chain alcohol deh 30.6 56 0.0019 26.9 4.6 34 5-42 6-39 (257)
259 3qvl_A Putative hydantoin race 30.5 2.3E+02 0.0077 23.3 10.2 37 6-43 2-39 (245)
260 4ep4_A Crossover junction endo 30.5 1.3E+02 0.0046 23.1 6.3 48 93-147 46-108 (166)
261 3c96_A Flavin-containing monoo 30.4 31 0.001 31.0 3.1 34 2-41 1-35 (410)
262 3f67_A Putative dienelactone h 30.3 69 0.0024 25.4 5.1 36 6-42 32-67 (241)
263 3hyw_A Sulfide-quinone reducta 30.1 34 0.0012 31.0 3.3 32 7-44 4-37 (430)
264 2d1p_A TUSD, hypothetical UPF0 30.0 77 0.0026 23.6 4.7 38 7-45 14-55 (140)
265 3e5n_A D-alanine-D-alanine lig 29.9 43 0.0015 29.9 3.9 39 3-42 20-62 (386)
266 1z82_A Glycerol-3-phosphate de 29.8 39 0.0013 29.4 3.6 40 6-51 15-55 (335)
267 3u9t_A MCC alpha, methylcroton 29.8 2E+02 0.0069 27.9 8.9 35 7-47 30-64 (675)
268 1efv_B Electron transfer flavo 29.7 90 0.0031 26.0 5.6 40 99-145 105-150 (255)
269 2yw2_A Phosphoribosylamine--gl 29.6 2.8E+02 0.0097 24.6 9.5 32 6-42 1-32 (424)
270 3kkj_A Amine oxidase, flavin-c 29.6 36 0.0012 27.7 3.3 28 7-40 4-31 (336)
271 1xrs_B D-lysine 5,6-aminomutas 29.5 44 0.0015 28.1 3.6 38 4-42 119-165 (262)
272 3qvo_A NMRA family protein; st 29.5 40 0.0014 27.4 3.4 19 23-42 37-56 (236)
273 1qsg_A Enoyl-[acyl-carrier-pro 29.5 70 0.0024 26.5 5.0 33 7-42 10-43 (265)
274 2a5l_A Trp repressor binding p 29.3 61 0.0021 25.3 4.5 36 7-43 7-43 (200)
275 3tox_A Short chain dehydrogena 29.2 51 0.0017 27.8 4.1 32 6-41 8-39 (280)
276 3cio_A ETK, tyrosine-protein k 29.2 50 0.0017 28.2 4.1 39 5-44 103-143 (299)
277 3gg2_A Sugar dehydrogenase, UD 29.2 37 0.0013 31.1 3.4 31 6-42 3-33 (450)
278 1cbk_A Protein (7,8-dihydro-6- 29.2 63 0.0022 24.7 4.2 28 279-306 3-30 (160)
279 3l4b_C TRKA K+ channel protien 29.1 21 0.00073 28.7 1.7 31 7-43 2-32 (218)
280 4g65_A TRK system potassium up 29.1 25 0.00085 32.4 2.3 32 5-42 3-34 (461)
281 3obb_A Probable 3-hydroxyisobu 29.0 53 0.0018 28.1 4.2 29 7-41 5-33 (300)
282 1z7e_A Protein aRNA; rossmann 29.0 1.1E+02 0.0036 29.6 6.8 39 102-147 67-106 (660)
283 3c7a_A Octopine dehydrogenase; 28.9 25 0.00087 31.6 2.3 30 6-41 3-33 (404)
284 2xdo_A TETX2 protein; tetracyc 28.9 47 0.0016 29.6 4.0 33 3-41 24-56 (398)
285 2pju_A Propionate catabolism o 28.8 52 0.0018 26.9 3.9 41 99-146 140-180 (225)
286 3tl2_A Malate dehydrogenase; c 28.8 45 0.0015 28.9 3.7 37 1-43 4-41 (315)
287 3ggo_A Prephenate dehydrogenas 28.7 2.7E+02 0.0094 23.7 9.2 33 5-43 33-67 (314)
288 2xj4_A MIPZ; replication, cell 28.6 43 0.0015 28.3 3.6 37 7-44 5-43 (286)
289 3nrc_A Enoyl-[acyl-carrier-pro 28.6 83 0.0028 26.3 5.4 35 6-44 26-62 (280)
290 2izz_A Pyrroline-5-carboxylate 28.5 26 0.00089 30.4 2.2 36 2-43 19-58 (322)
291 2zts_A Putative uncharacterize 28.5 2.3E+02 0.0077 22.7 9.0 42 7-49 32-74 (251)
292 3nix_A Flavoprotein/dehydrogen 28.3 35 0.0012 30.5 3.1 36 1-42 1-36 (421)
293 2m1z_A LMO0427 protein; homolo 28.2 55 0.0019 23.1 3.4 35 7-42 4-41 (106)
294 3p9x_A Phosphoribosylglycinami 28.1 2.3E+02 0.0079 22.7 8.6 102 7-146 4-111 (211)
295 3ip0_A 2-amino-4-hydroxy-6-hyd 28.1 68 0.0023 24.5 4.2 28 279-306 2-29 (158)
296 3da8_A Probable 5'-phosphoribo 28.1 2E+02 0.0067 23.2 7.2 64 295-385 78-141 (215)
297 2jae_A L-amino acid oxidase; o 28.0 51 0.0017 30.3 4.2 33 3-41 9-41 (489)
298 2etv_A Iron(III) ABC transport 27.9 62 0.0021 28.2 4.6 30 117-146 96-126 (346)
299 3h5i_A Response regulator/sens 27.9 92 0.0031 22.3 5.0 36 1-41 1-36 (140)
300 3f8d_A Thioredoxin reductase ( 27.8 43 0.0015 28.4 3.5 33 5-43 15-47 (323)
301 3o26_A Salutaridine reductase; 27.7 63 0.0022 27.3 4.6 34 5-42 11-44 (311)
302 4fu0_A D-alanine--D-alanine li 27.7 50 0.0017 29.1 3.9 38 3-41 1-42 (357)
303 1e2b_A Enzyme IIB-cellobiose; 27.6 1E+02 0.0034 21.6 4.8 36 5-41 3-38 (106)
304 3doj_A AT3G25530, dehydrogenas 27.5 66 0.0022 27.6 4.6 32 5-42 21-52 (310)
305 2x5n_A SPRPN10, 26S proteasome 27.5 94 0.0032 24.5 5.2 34 7-41 108-142 (192)
306 1meo_A Phosophoribosylglycinam 27.4 76 0.0026 25.5 4.6 29 117-145 29-57 (209)
307 2vpq_A Acetyl-COA carboxylase; 27.4 2.1E+02 0.0072 25.8 8.3 31 7-43 3-33 (451)
308 2xwp_A Sirohydrochlorin cobalt 27.3 93 0.0032 25.9 5.4 38 277-314 3-43 (264)
309 3ea0_A ATPase, para family; al 27.3 51 0.0017 26.8 3.7 38 6-44 4-44 (245)
310 2rk3_A Protein DJ-1; parkinson 27.1 1.3E+02 0.0044 23.5 6.0 40 1-44 1-40 (197)
311 2vzf_A NADH-dependent FMN redu 27.1 67 0.0023 25.3 4.3 34 7-41 4-41 (197)
312 1oi4_A Hypothetical protein YH 27.1 1.4E+02 0.0048 23.3 6.2 38 5-44 23-60 (193)
313 2raf_A Putative dinucleotide-b 27.0 58 0.002 26.0 3.9 32 5-42 19-50 (209)
314 1js1_X Transcarbamylase; alpha 26.9 66 0.0023 27.9 4.4 40 6-46 169-208 (324)
315 4e5v_A Putative THUA-like prot 26.9 83 0.0028 26.6 5.0 39 3-43 2-43 (281)
316 3io5_A Recombination and repai 26.9 2E+02 0.0067 25.0 7.3 38 7-45 30-69 (333)
317 3fgn_A Dethiobiotin synthetase 26.8 69 0.0024 26.6 4.4 36 5-41 25-62 (251)
318 4ehi_A Bifunctional purine bio 26.7 60 0.002 30.1 4.1 41 17-65 32-72 (534)
319 3e1t_A Halogenase; flavoprotei 26.6 36 0.0012 31.7 2.9 32 5-42 7-38 (512)
320 3itj_A Thioredoxin reductase 1 26.5 33 0.0011 29.4 2.5 32 5-42 22-53 (338)
321 1iow_A DD-ligase, DDLB, D-ALA\ 26.4 95 0.0032 26.1 5.5 37 6-43 3-43 (306)
322 3v8b_A Putative dehydrogenase, 26.3 70 0.0024 26.9 4.5 34 5-42 27-60 (283)
323 1p9o_A Phosphopantothenoylcyst 26.2 36 0.0012 29.4 2.6 22 22-44 68-89 (313)
324 2w36_A Endonuclease V; hypoxan 26.2 87 0.003 25.5 4.7 40 101-145 92-138 (225)
325 3c3m_A Response regulator rece 26.1 1E+02 0.0036 21.9 5.0 30 117-146 47-85 (138)
326 1zi8_A Carboxymethylenebutenol 26.1 93 0.0032 24.5 5.1 34 7-41 29-62 (236)
327 1dhr_A Dihydropteridine reduct 25.9 75 0.0026 25.8 4.5 34 5-42 6-39 (241)
328 3c24_A Putative oxidoreductase 25.9 50 0.0017 27.9 3.5 31 6-42 12-43 (286)
329 3dqp_A Oxidoreductase YLBE; al 25.9 51 0.0017 26.3 3.4 32 7-43 2-33 (219)
330 4hn9_A Iron complex transport 25.9 59 0.002 28.2 4.0 30 117-146 116-145 (335)
331 4gbj_A 6-phosphogluconate dehy 25.8 58 0.002 27.8 3.9 29 7-41 7-35 (297)
332 4dna_A Probable glutathione re 25.8 46 0.0016 30.4 3.5 36 1-42 1-36 (463)
333 3t4x_A Oxidoreductase, short c 25.8 95 0.0032 25.7 5.2 33 6-42 10-42 (267)
334 2q3e_A UDP-glucose 6-dehydroge 25.7 61 0.0021 29.8 4.2 35 2-42 2-38 (467)
335 3atr_A Conserved archaeal prot 25.6 23 0.0008 32.3 1.4 36 1-42 2-37 (453)
336 3end_A Light-independent proto 25.5 78 0.0027 26.9 4.7 36 7-43 43-78 (307)
337 3cmu_A Protein RECA, recombina 25.5 3.1E+02 0.011 30.6 10.0 39 6-45 1428-1466(2050)
338 1zym_A Enzyme I; phosphotransf 25.3 65 0.0022 26.9 4.0 44 344-387 155-203 (258)
339 1dbw_A Transcriptional regulat 25.3 1.4E+02 0.0048 20.6 5.5 32 117-148 47-85 (126)
340 3o0h_A Glutathione reductase; 25.1 48 0.0016 30.6 3.5 32 5-42 26-57 (484)
341 3u7q_A Nitrogenase molybdenum- 25.1 73 0.0025 29.6 4.6 34 101-144 408-441 (492)
342 2yg5_A Putrescine oxidase; oxi 25.0 38 0.0013 30.7 2.7 35 1-41 1-35 (453)
343 2ewd_A Lactate dehydrogenase,; 25.0 42 0.0014 29.0 2.9 34 4-43 3-37 (317)
344 1qyc_A Phenylcoumaran benzylic 24.9 64 0.0022 27.2 4.0 32 6-43 5-37 (308)
345 3ot1_A 4-methyl-5(B-hydroxyeth 24.8 1.2E+02 0.0042 24.0 5.5 35 7-43 11-45 (208)
346 3lzw_A Ferredoxin--NADP reduct 24.8 35 0.0012 29.2 2.3 33 5-43 7-39 (332)
347 4eg0_A D-alanine--D-alanine li 24.7 1.2E+02 0.0042 25.8 5.9 39 5-44 13-55 (317)
348 3tfo_A Putative 3-oxoacyl-(acy 24.7 98 0.0034 25.7 5.1 32 7-42 5-36 (264)
349 3rkr_A Short chain oxidoreduct 24.6 97 0.0033 25.5 5.1 33 6-42 29-61 (262)
350 1byi_A Dethiobiotin synthase; 24.6 81 0.0028 25.1 4.5 32 8-40 4-36 (224)
351 3ka7_A Oxidoreductase; structu 24.6 49 0.0017 29.6 3.4 29 7-41 2-30 (425)
352 3e9m_A Oxidoreductase, GFO/IDH 24.5 82 0.0028 27.2 4.7 39 1-44 1-39 (330)
353 3ruf_A WBGU; rossmann fold, UD 24.4 58 0.002 28.2 3.8 34 4-42 24-57 (351)
354 1tmy_A CHEY protein, TMY; chem 24.4 1.5E+02 0.0053 20.1 5.6 32 117-148 47-85 (120)
355 3b2n_A Uncharacterized protein 24.3 1.5E+02 0.005 20.9 5.5 31 117-147 49-86 (133)
356 3ab1_A Ferredoxin--NADP reduct 24.1 51 0.0018 28.7 3.3 35 2-42 11-45 (360)
357 3pxx_A Carveol dehydrogenase; 24.1 93 0.0032 25.9 4.9 34 5-42 9-42 (287)
358 2xws_A Sirohydrochlorin cobalt 24.1 1.5E+02 0.0053 21.2 5.6 47 6-53 4-59 (133)
359 1sby_A Alcohol dehydrogenase; 24.1 1.4E+02 0.0047 24.3 5.9 38 1-43 1-39 (254)
360 3cty_A Thioredoxin reductase; 24.1 50 0.0017 28.1 3.2 33 4-42 15-47 (319)
361 3i3l_A Alkylhalidase CMLS; fla 24.1 62 0.0021 30.9 4.0 35 2-42 20-54 (591)
362 1mio_B Nitrogenase molybdenum 24.0 74 0.0025 29.2 4.4 33 102-144 377-409 (458)
363 3alj_A 2-methyl-3-hydroxypyrid 24.0 57 0.002 28.7 3.7 33 3-41 9-41 (379)
364 3osu_A 3-oxoacyl-[acyl-carrier 24.0 1.1E+02 0.0036 25.0 5.1 32 7-42 5-36 (246)
365 3of5_A Dethiobiotin synthetase 24.0 78 0.0027 25.7 4.2 33 8-41 7-40 (228)
366 3d3w_A L-xylulose reductase; u 23.9 87 0.003 25.3 4.6 32 7-42 8-39 (244)
367 3av3_A Phosphoribosylglycinami 23.9 2.3E+02 0.0077 22.7 6.9 64 295-385 71-134 (212)
368 3o1l_A Formyltetrahydrofolate 23.9 1.8E+02 0.0062 24.9 6.6 68 292-386 167-234 (302)
369 3rp8_A Flavoprotein monooxygen 23.9 57 0.002 29.0 3.7 33 3-41 21-53 (407)
370 3n0v_A Formyltetrahydrofolate 23.9 3.3E+02 0.011 23.0 11.8 105 3-146 88-196 (286)
371 2gqf_A Hypothetical protein HI 23.8 36 0.0012 30.6 2.3 35 2-42 1-35 (401)
372 3slg_A PBGP3 protein; structur 23.8 1.1E+02 0.0037 26.7 5.5 33 5-42 24-57 (372)
373 3md9_A Hemin-binding periplasm 23.8 83 0.0028 25.8 4.4 29 117-145 59-89 (255)
374 3e18_A Oxidoreductase; dehydro 23.7 62 0.0021 28.4 3.8 39 1-44 1-39 (359)
375 3s55_A Putative short-chain de 23.7 96 0.0033 25.9 4.9 33 6-42 10-42 (281)
376 3cg0_A Response regulator rece 23.7 1.4E+02 0.0047 21.1 5.3 32 117-148 54-92 (140)
377 3c85_A Putative glutathione-re 23.7 40 0.0014 26.1 2.3 33 5-43 39-72 (183)
378 1e7w_A Pteridine reductase; di 23.6 89 0.0031 26.3 4.7 32 6-41 9-40 (291)
379 2zyd_A 6-phosphogluconate dehy 23.6 45 0.0015 30.9 2.9 34 3-42 13-46 (480)
380 3op4_A 3-oxoacyl-[acyl-carrier 23.5 1.1E+02 0.0038 24.9 5.2 34 5-42 8-41 (248)
381 1pzg_A LDH, lactate dehydrogen 23.5 50 0.0017 28.8 3.0 33 5-43 9-42 (331)
382 3l6e_A Oxidoreductase, short-c 23.4 97 0.0033 25.1 4.7 31 8-42 5-35 (235)
383 3iwa_A FAD-dependent pyridine 23.4 56 0.0019 29.9 3.5 34 5-44 3-38 (472)
384 3ego_A Probable 2-dehydropanto 23.4 58 0.002 27.9 3.4 39 6-51 3-42 (307)
385 1cp2_A CP2, nitrogenase iron p 23.4 82 0.0028 26.0 4.4 34 7-41 3-36 (269)
386 3nrn_A Uncharacterized protein 23.3 57 0.002 29.2 3.6 29 7-41 2-30 (421)
387 2vrn_A Protease I, DR1199; cys 23.3 1.9E+02 0.0065 22.3 6.3 40 3-44 7-46 (190)
388 3gt7_A Sensor protein; structu 23.3 1.1E+02 0.0036 22.5 4.6 30 117-146 51-89 (154)
389 2r6j_A Eugenol synthase 1; phe 23.3 71 0.0024 27.2 4.0 32 7-43 13-44 (318)
390 4ds3_A Phosphoribosylglycinami 23.2 1.7E+02 0.0057 23.5 5.9 64 295-385 75-138 (209)
391 3nrb_A Formyltetrahydrofolate 23.2 1.5E+02 0.0051 25.2 5.9 65 295-386 154-218 (287)
392 1meo_A Phosophoribosylglycinam 23.2 2.6E+02 0.009 22.3 7.1 63 296-385 69-131 (209)
393 2iz1_A 6-phosphogluconate dehy 23.2 49 0.0017 30.5 3.1 34 3-42 3-36 (474)
394 3dqz_A Alpha-hydroxynitrIle ly 23.2 45 0.0016 26.8 2.7 34 8-42 6-39 (258)
395 3pk0_A Short-chain dehydrogena 23.1 1.1E+02 0.0039 25.1 5.2 34 5-42 9-42 (262)
396 1zl0_A Hypothetical protein PA 23.1 96 0.0033 26.7 4.7 28 290-317 64-91 (311)
397 1rsg_A FMS1 protein; FAD bindi 23.1 41 0.0014 31.3 2.6 33 3-41 6-39 (516)
398 3h7a_A Short chain dehydrogena 23.1 91 0.0031 25.6 4.5 34 5-42 6-39 (252)
399 1tlt_A Putative oxidoreductase 23.0 83 0.0029 26.9 4.4 38 1-42 1-38 (319)
400 1jay_A Coenzyme F420H2:NADP+ o 23.0 69 0.0024 25.3 3.7 30 7-42 2-32 (212)
401 2h78_A Hibadh, 3-hydroxyisobut 22.9 76 0.0026 26.9 4.1 31 6-42 4-34 (302)
402 3grc_A Sensor protein, kinase; 22.9 1.6E+02 0.0053 20.9 5.4 32 117-148 50-90 (140)
403 3p9x_A Phosphoribosylglycinami 22.8 2.4E+02 0.0084 22.6 6.8 64 295-385 70-133 (211)
404 2ab0_A YAJL; DJ-1/THIJ superfa 22.8 1.5E+02 0.005 23.5 5.6 36 7-44 4-39 (205)
405 3l3b_A ES1 family protein; ssg 22.8 1.4E+02 0.0047 24.6 5.4 36 7-44 25-65 (242)
406 1gsa_A Glutathione synthetase; 22.7 67 0.0023 27.2 3.8 36 7-43 3-41 (316)
407 1vpd_A Tartronate semialdehyde 22.7 66 0.0023 27.2 3.7 31 6-42 6-36 (299)
408 4a9w_A Monooxygenase; baeyer-v 22.7 49 0.0017 28.5 2.9 34 4-43 2-35 (357)
409 3tri_A Pyrroline-5-carboxylate 22.7 3.3E+02 0.011 22.6 9.8 32 5-42 3-37 (280)
410 3icc_A Putative 3-oxoacyl-(acy 22.6 1.6E+02 0.0054 23.9 6.0 33 6-42 7-39 (255)
411 2rjn_A Response regulator rece 22.6 1.3E+02 0.0044 21.9 5.0 33 117-149 51-90 (154)
412 4fbl_A LIPS lipolytic enzyme; 22.5 51 0.0017 27.5 2.9 32 9-41 54-85 (281)
413 1txg_A Glycerol-3-phosphate de 22.5 51 0.0017 28.4 2.9 30 7-42 2-31 (335)
414 1zk7_A HGII, reductase, mercur 22.5 71 0.0024 29.2 4.0 36 2-43 1-36 (467)
415 3k5i_A Phosphoribosyl-aminoimi 22.4 1.2E+02 0.004 27.2 5.4 34 2-41 21-54 (403)
416 3mxo_A Serine/threonine-protei 22.4 39 0.0013 26.8 2.0 21 365-385 139-159 (202)
417 1ges_A Glutathione reductase; 22.3 53 0.0018 29.9 3.1 35 3-43 2-36 (450)
418 3l77_A Short-chain alcohol deh 22.3 96 0.0033 24.9 4.5 32 7-42 3-34 (235)
419 1yb4_A Tartronic semialdehyde 22.3 70 0.0024 26.9 3.7 30 6-41 4-33 (295)
420 3nb0_A Glycogen [starch] synth 22.2 47 0.0016 32.3 2.7 40 346-387 495-547 (725)
421 3dje_A Fructosyl amine: oxygen 22.2 58 0.002 29.3 3.4 33 4-42 5-38 (438)
422 3pdi_A Nitrogenase MOFE cofact 22.2 71 0.0024 29.6 3.9 34 101-144 392-425 (483)
423 1srr_A SPO0F, sporulation resp 22.2 1.6E+02 0.0053 20.3 5.2 31 117-147 47-84 (124)
424 3i6d_A Protoporphyrinogen oxid 22.1 38 0.0013 30.8 2.1 35 1-41 1-41 (470)
425 1u7z_A Coenzyme A biosynthesis 22.0 69 0.0024 26.1 3.4 22 22-44 37-58 (226)
426 3nhm_A Response regulator; pro 22.0 1.6E+02 0.0056 20.4 5.4 30 117-146 47-85 (133)
427 3grp_A 3-oxoacyl-(acyl carrier 22.0 1.2E+02 0.0042 25.1 5.2 33 6-42 27-59 (266)
428 3gem_A Short chain dehydrogena 22.0 69 0.0024 26.5 3.6 33 7-43 28-60 (260)
429 1zgz_A Torcad operon transcrip 22.0 1.4E+02 0.0049 20.3 5.0 31 117-147 46-82 (122)
430 3hv2_A Response regulator/HD d 21.9 1.4E+02 0.0046 21.7 5.0 32 117-148 58-96 (153)
431 2q8p_A Iron-regulated surface 21.8 74 0.0025 26.2 3.7 30 117-146 60-90 (260)
432 1mb3_A Cell division response 21.8 1.6E+02 0.0053 20.2 5.2 30 117-146 45-83 (124)
433 2wtm_A EST1E; hydrolase; 1.60A 21.8 1.3E+02 0.0044 24.2 5.2 34 7-41 28-63 (251)
434 3v2h_A D-beta-hydroxybutyrate 21.8 1E+02 0.0035 25.8 4.7 32 7-42 26-57 (281)
435 3vps_A TUNA, NAD-dependent epi 21.8 51 0.0017 28.0 2.8 33 5-42 7-39 (321)
436 3pef_A 6-phosphogluconate dehy 21.7 87 0.003 26.3 4.2 31 6-42 2-32 (287)
437 3qrx_B Melittin; calcium-bindi 21.7 44 0.0015 16.2 1.2 16 371-386 1-16 (26)
438 2xxa_A Signal recognition part 21.6 1.2E+02 0.0042 27.5 5.3 40 7-47 102-142 (433)
439 3ppi_A 3-hydroxyacyl-COA dehyd 21.6 1.1E+02 0.0037 25.5 4.8 33 6-42 30-62 (281)
440 3m1a_A Putative dehydrogenase; 21.6 1E+02 0.0036 25.6 4.7 33 6-42 5-37 (281)
441 2qxy_A Response regulator; reg 21.5 1.3E+02 0.0043 21.4 4.7 30 117-147 48-84 (142)
442 1yt5_A Inorganic polyphosphate 21.5 38 0.0013 28.3 1.8 25 363-387 42-69 (258)
443 3sju_A Keto reductase; short-c 21.5 94 0.0032 26.0 4.4 34 5-42 23-56 (279)
444 3psh_A Protein HI_1472; substr 21.3 87 0.003 26.9 4.2 30 117-146 84-114 (326)
445 3kd9_A Coenzyme A disulfide re 21.3 56 0.0019 29.7 3.1 35 4-44 2-38 (449)
446 3obi_A Formyltetrahydrofolate 21.3 1.7E+02 0.0058 24.8 5.8 66 294-386 154-219 (288)
447 3l6d_A Putative oxidoreductase 21.3 52 0.0018 28.2 2.7 32 5-42 9-40 (306)
448 1sez_A Protoporphyrinogen oxid 21.3 67 0.0023 29.6 3.7 32 4-41 12-43 (504)
449 3ug7_A Arsenical pump-driving 21.2 1.1E+02 0.0038 26.7 4.9 38 7-45 27-65 (349)
450 2l82_A Designed protein OR32; 21.2 2.1E+02 0.0072 19.9 5.1 34 279-316 3-36 (162)
451 2hmt_A YUAA protein; RCK, KTN, 21.2 48 0.0016 24.0 2.2 31 6-42 7-37 (144)
452 3tqr_A Phosphoribosylglycinami 21.2 2.5E+02 0.0084 22.6 6.5 64 295-385 72-135 (215)
453 3g1w_A Sugar ABC transporter; 21.2 3.5E+02 0.012 22.3 10.8 29 117-145 61-93 (305)
454 2l69_A Rossmann 2X3 fold prote 21.1 69 0.0024 21.6 2.6 27 17-44 85-111 (134)
455 2hq1_A Glucose/ribitol dehydro 21.0 1.1E+02 0.0036 24.8 4.5 36 1-41 1-36 (247)
456 2rcy_A Pyrroline carboxylate r 21.0 43 0.0015 27.7 2.1 32 5-42 4-39 (262)
457 3h75_A Periplasmic sugar-bindi 21.0 3.9E+02 0.013 22.7 9.8 39 100-145 51-93 (350)
458 3qxc_A Dethiobiotin synthetase 21.0 1.2E+02 0.0042 24.9 4.8 34 8-42 24-58 (242)
459 3lou_A Formyltetrahydrofolate 21.0 1.7E+02 0.0059 24.8 5.8 65 295-386 160-224 (292)
460 3oig_A Enoyl-[acyl-carrier-pro 21.0 1.4E+02 0.0047 24.5 5.3 33 6-42 7-41 (266)
461 2plr_A DTMP kinase, probable t 20.9 1.3E+02 0.0045 23.4 5.0 37 2-40 1-37 (213)
462 2wm3_A NMRA-like family domain 20.9 88 0.003 26.3 4.1 34 5-43 5-39 (299)
463 1mv8_A GMD, GDP-mannose 6-dehy 20.9 94 0.0032 28.2 4.5 30 7-42 2-31 (436)
464 1g8m_A Aicar transformylase-IM 20.9 73 0.0025 30.0 3.6 101 5-128 5-107 (593)
465 1i36_A Conserved hypothetical 20.8 70 0.0024 26.4 3.4 29 7-41 2-30 (264)
466 3i6i_A Putative leucoanthocyan 20.8 57 0.0019 28.3 2.9 37 3-44 8-44 (346)
467 3kcq_A Phosphoribosylglycinami 20.8 1.9E+02 0.0064 23.3 5.7 63 296-385 72-134 (215)
468 3mog_A Probable 3-hydroxybutyr 20.8 49 0.0017 30.6 2.5 36 1-42 1-36 (483)
469 3oz2_A Digeranylgeranylglycero 20.8 50 0.0017 29.0 2.6 32 3-40 2-33 (397)
470 2h7i_A Enoyl-[acyl-carrier-pro 20.7 1.4E+02 0.0048 24.6 5.3 33 7-42 8-41 (269)
471 2oln_A NIKD protein; flavoprot 20.7 60 0.0021 28.7 3.1 32 5-42 4-35 (397)
472 1e6u_A GDP-fucose synthetase; 20.7 82 0.0028 26.7 3.9 31 6-41 4-34 (321)
473 3pdu_A 3-hydroxyisobutyrate de 20.7 88 0.003 26.3 4.0 30 7-42 3-32 (287)
474 2a9o_A Response regulator; ess 20.7 2E+02 0.0069 19.3 5.6 32 117-148 45-82 (120)
475 3d4o_A Dipicolinate synthase s 20.7 1.2E+02 0.0042 25.6 4.9 34 2-41 2-35 (293)
476 2r7a_A Bacterial heme binding 20.6 1E+02 0.0036 25.2 4.4 29 117-145 59-89 (256)
477 4e7p_A Response regulator; DNA 20.5 1.5E+02 0.005 21.5 4.9 31 117-147 66-103 (150)
478 3rih_A Short chain dehydrogena 20.5 1.3E+02 0.0046 25.3 5.2 34 5-42 40-73 (293)
479 2q7v_A Thioredoxin reductase; 20.5 63 0.0021 27.6 3.1 34 4-43 7-40 (325)
480 3cfy_A Putative LUXO repressor 20.5 1.9E+02 0.0065 20.4 5.5 31 117-147 48-85 (137)
481 3uk7_A Class I glutamine amido 20.4 1.5E+02 0.0052 26.3 5.7 39 3-43 10-48 (396)
482 3ioy_A Short-chain dehydrogena 20.4 1.3E+02 0.0046 25.7 5.2 33 6-42 8-40 (319)
483 3qxc_A Dethiobiotin synthetase 20.4 1.8E+02 0.0061 23.9 5.7 43 100-147 119-170 (242)
484 2qr3_A Two-component system re 20.3 1.6E+02 0.0055 20.7 5.0 32 117-148 47-90 (140)
485 3dtt_A NADP oxidoreductase; st 20.3 83 0.0028 25.8 3.7 32 5-42 19-50 (245)
486 3f6r_A Flavodoxin; FMN binding 20.3 1.3E+02 0.0046 21.9 4.6 36 8-44 4-40 (148)
487 3a10_A Response regulator; pho 20.3 2E+02 0.007 19.2 5.5 30 117-146 45-81 (116)
488 3eod_A Protein HNR; response r 20.3 1.5E+02 0.005 20.6 4.7 32 117-148 51-89 (130)
489 2x4g_A Nucleoside-diphosphate- 20.3 83 0.0028 27.0 3.9 32 6-42 14-45 (342)
490 3h1g_A Chemotaxis protein CHEY 20.3 1.9E+02 0.0063 20.1 5.3 31 117-147 51-90 (129)
491 3fkq_A NTRC-like two-domain pr 20.2 97 0.0033 27.4 4.3 38 5-43 142-181 (373)
492 3c1o_A Eugenol synthase; pheny 20.2 83 0.0028 26.8 3.8 32 7-43 6-37 (321)
493 2xdq_B Light-independent proto 20.2 71 0.0024 29.8 3.5 34 101-144 363-396 (511)
494 3efe_A THIJ/PFPI family protei 20.2 1.1E+02 0.0039 24.3 4.4 43 1-44 3-50 (212)
495 2z1m_A GDP-D-mannose dehydrata 20.2 78 0.0027 27.1 3.7 32 6-42 4-35 (345)
496 3n0v_A Formyltetrahydrofolate 20.1 1.8E+02 0.0063 24.6 5.8 66 294-386 154-219 (286)
497 4hv4_A UDP-N-acetylmuramate--L 20.1 1.1E+02 0.0038 28.3 4.9 32 5-41 22-53 (494)
498 3un1_A Probable oxidoreductase 20.0 69 0.0024 26.5 3.1 33 6-42 28-60 (260)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=7.8e-55 Score=406.34 Aligned_cols=349 Identities=27% Similarity=0.430 Sum_probs=271.2
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCC--cEEEEEeCCcchhhhhhcCCC-CCCeeEEeccCCCCCCCCCCCCCCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNR--YTITFVNTPSNLKKLKSSLPQ-NSSIHLREIPFDGIAHDLPPCTENS 80 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rG--h~Vt~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~ 80 (387)
++.||+++|+|++||++||+.||+.|++ +| +.|||++++.+..++.+.... ..+|+|..+| ++++++.+..
T Consensus 12 ~~~hvv~~P~p~~GHi~P~l~Lak~L~~-~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ip-----dglp~~~~~~ 85 (454)
T 3hbf_A 12 NLLHVAVLAFPFGTHAAPLLSLVKKIAT-EAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVH-----DGLPKGYVSS 85 (454)
T ss_dssp CCCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECC-----CCCCTTCCCC
T ss_pred CCCEEEEEcCCcccHHHHHHHHHHHHHh-CCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecC-----CCCCCCcccc
Confidence 4789999999999999999999999999 99 999999998777666543211 1579999987 5777765544
Q ss_pred CCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHHHHhhh
Q 040467 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSLWL 160 (387)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~ 160 (387)
.+ +...+..+. +...+.+++.++++..+... ++||||+|.++.|+..+|+++|||++.+++++++.+..+.+.+.
T Consensus 86 ~~-~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~-~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 86 GN-PREPIFLFI---KAMQENFKHVIDEAVAETGK-NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp SC-TTHHHHHHH---HHHHHHHHHHHHHHHHHHCC-CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred CC-hHHHHHHHH---HHHHHHHHHHHHHHHhhcCC-CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 32 221122233 33344455555544322222 68999999999999999999999999999999998887765432
Q ss_pred cCCC------CCCCcc-cCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHHH
Q 040467 161 NLPH------RDSDEF-LLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYFS 233 (387)
Q Consensus 161 ~~p~------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~ 233 (387)
.... ...+.. .+|++|. ++.++++.++.. .....+.+.+.+..+....++++++||+.+||+++++.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~iPg~p~---~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~ 236 (454)
T 3hbf_A 161 IREKTGSKEVHDVKSIDVLPGFPE---LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELN 236 (454)
T ss_dssp HHHTCCHHHHTTSSCBCCSTTSCC---BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred HHhhcCCCccccccccccCCCCCC---cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHH
Confidence 1110 001222 3778876 788888877653 3344566777777788889999999999999999999998
Q ss_pred hhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEEE
Q 040467 234 RKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVV 313 (387)
Q Consensus 234 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~~ 313 (387)
..+ +++++|||++..... .....+.++.+||+.++++++|||||||+...+.+++.+++++|++.+++|||++
T Consensus 237 ~~~-~~v~~vGPl~~~~~~------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~ 309 (454)
T 3hbf_A 237 SKF-KLLLNVGPFNLTTPQ------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSF 309 (454)
T ss_dssp TTS-SCEEECCCHHHHSCC------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEEC
T ss_pred hcC-CCEEEECCccccccc------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEe
Confidence 776 799999999864311 0123467899999998888999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 314 KPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
+.+. . +.+|+++.++. +.|+++++|+||.+||+|+++++|||||||||+.||+++|||||+
T Consensus 310 ~~~~-------~---~~lp~~~~~~~---~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~ 370 (454)
T 3hbf_A 310 RGDP-------K---EKLPKGFLERT---KTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMIS 370 (454)
T ss_dssp CSCH-------H---HHSCTTHHHHT---TTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred CCcc-------h---hcCCHhHHhhc---CCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEec
Confidence 8652 1 23778887766 467888899999999999999999999999999999999999985
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=2e-50 Score=384.10 Aligned_cols=365 Identities=27% Similarity=0.512 Sum_probs=255.8
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCC-----CCCeeEEeccCCCCCCCCCCC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQ-----NSSIHLREIPFDGIAHDLPPC 76 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~ 76 (387)
+|+++||+++|+|++||++|++.||++|++ |||+|||++++.+...+.+.... ..+++|..++ ++++..
T Consensus 5 ~~~~~~vl~~p~p~~GHi~P~l~La~~L~~-rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~lp~~ 78 (482)
T 2pq6_A 5 ANRKPHVVMIPYPVQGHINPLFKLAKLLHL-RGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIP-----DGLTPM 78 (482)
T ss_dssp ---CCEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEEEHHHHHHHC------------CEEEEEEC-----CCCC--
T ss_pred cCCCCEEEEecCccchhHHHHHHHHHHHHh-CCCeEEEEeCCchhhhhccccccccccCCCceEEEECC-----CCCCCc
Confidence 355789999999999999999999999999 99999999999887776553110 0378999887 344431
Q ss_pred CCCCCCCCCCchhHHHHHH-hhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHH
Q 040467 77 TENSDSLPFHLFPNFFEST-LSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACF 155 (387)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~ 155 (387)
.... . .......++..+ +.+.+.++++++++..+.+..++||||+|.++.|+..+|+++|||++.++++++......
T Consensus 79 ~~~~-~-~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~ 156 (482)
T 2pq6_A 79 EGDG-D-VSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNV 156 (482)
T ss_dssp ---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHH
T ss_pred cccc-C-cchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHH
Confidence 1000 1 112344555555 667788888888764211011799999999999999999999999999999988766554
Q ss_pred HHh-----hhcCCCCCC--------Cc--ccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEec
Q 040467 156 YSL-----WLNLPHRDS--------DE--FLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNT 220 (387)
Q Consensus 156 ~~~-----~~~~p~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (387)
.+. ..+.|.... +. ..+|+++. ++...++.++........+.+.+.........++++++||
T Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt 233 (482)
T 2pq6_A 157 MHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKN---FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNT 233 (482)
T ss_dssp TTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS---CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESS
T ss_pred HHHHHHHhcCCCCCccccccccccccCccccCCCCCC---CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcC
Confidence 321 234443211 11 11334432 4444555444322222344444444555667789999999
Q ss_pred hhhhcHHHHHHHHhhcCCCeEEeccccCC-CCCC--C---CCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHH
Q 040467 221 VEELDKIGLMYFSRKLGRPVWPVGSLLLS-TGSR--A---GAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQ 294 (387)
Q Consensus 221 ~~~le~~~~~~~~~~~~~~~~~vGp~~~~-~~~~--~---~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~ 294 (387)
+.+||+++++.++..+ +++++|||++.. +... . ..+...+..+.++.+||++++++++|||||||+...+.++
T Consensus 234 ~~~le~~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 312 (482)
T 2pq6_A 234 FNELESDVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQ 312 (482)
T ss_dssp CGGGGHHHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHH
T ss_pred hHHHhHHHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHH
Confidence 9999999999999887 899999999763 2110 0 0000112335568999999877899999999998888888
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhH
Q 040467 295 MMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNS 374 (387)
Q Consensus 295 ~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s 374 (387)
+.+++++|++.+++|||+++.+. ..++. ..+++++.+++ +.|+++++|+||.+||+|+++++||||||+||
T Consensus 313 ~~~~~~~l~~~~~~~l~~~~~~~---~~~~~---~~l~~~~~~~~---~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s 383 (482)
T 2pq6_A 313 LLEFAWGLANCKKSFLWIIRPDL---VIGGS---VIFSSEFTNEI---ADRGLIASWCPQDKVLNHPSIGGFLTHCGWNS 383 (482)
T ss_dssp HHHHHHHHHHTTCEEEEECCGGG---STTTG---GGSCHHHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHH
T ss_pred HHHHHHHHHhcCCcEEEEEcCCc---ccccc---ccCcHhHHHhc---CCCEEEEeecCHHHHhcCCCCCEEEecCCcch
Confidence 99999999999999999997541 00000 12677777665 56899999999999999999999999999999
Q ss_pred HHHHHHcCCcccC
Q 040467 375 VLEALSHRVPIIG 387 (387)
Q Consensus 375 ~~eal~~GvP~l~ 387 (387)
+.||+++|||||+
T Consensus 384 ~~Eal~~GvP~i~ 396 (482)
T 2pq6_A 384 TTESICAGVPMLC 396 (482)
T ss_dssp HHHHHHHTCCEEE
T ss_pred HHHHHHcCCCEEe
Confidence 9999999999985
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=8e-49 Score=371.86 Aligned_cols=357 Identities=28% Similarity=0.491 Sum_probs=253.8
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCC-CcEEEEEeCCc--chhhhhhcCCC-CCCeeEEeccCCCCCCCCCCCCCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTN-RYTITFVNTPS--NLKKLKSSLPQ-NSSIHLREIPFDGIAHDLPPCTEN 79 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~~~~--~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 79 (387)
+++||+++|+|++||++|+++||++|++ | ||+|||++++. +...+++.... ..+++|+.++.. .++..
T Consensus 5 ~~~~vl~~p~p~~GHv~P~l~La~~L~~-r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~----~~~~~--- 76 (480)
T 2vch_A 5 KTPHVAIIPSPGMGHLIPLVEFAKRLVH-LHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPV----DLTDL--- 76 (480)
T ss_dssp -CCEEEEECCSCHHHHHHHHHHHHHHHH-HHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCC----CCTTS---
T ss_pred CCcEEEEecCcchhHHHHHHHHHHHHHh-CCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCC----CCCCC---
Confidence 4579999999999999999999999999 9 99999999887 44545432111 168899998743 11111
Q ss_pred CCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCC-eEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHHHHh
Q 040467 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKP-VCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSL 158 (387)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~p-D~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 158 (387)
.. .......+...+..+.+.++++++++.. .. ++ |+||+|.++.++..+|+++|||++.++++++.....+.+.
T Consensus 77 -~~-~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~~-~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 151 (480)
T 2vch_A 77 -SS-STRIESRISLTVTRSNPELRKVFDSFVE--GG-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHL 151 (480)
T ss_dssp -CT-TCCHHHHHHHHHHTTHHHHHHHHHHHHH--TT-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHH
T ss_pred -CC-chhHHHHHHHHHHhhhHHHHHHHHHhcc--CC-CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHH
Confidence 00 1111233445556677888888877531 12 67 9999999999999999999999999999988776655432
Q ss_pred hh---cCCCCC---CCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHH
Q 040467 159 WL---NLPHRD---SDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYF 232 (387)
Q Consensus 159 ~~---~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~ 232 (387)
+. ...... ......|+++. +....++..+... .......+.+.....+.+.++++|++.++|.+.+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~Pg~~p---~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l 226 (480)
T 2vch_A 152 PKLDETVSCEFRELTEPLMLPGCVP---VAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKAL 226 (480)
T ss_dssp HHHHHHCCSCGGGCSSCBCCTTCCC---BCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHH
T ss_pred HHHHhcCCCcccccCCcccCCCCCC---CChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHH
Confidence 21 111000 11123455554 4444555443221 1223344444555667788999999999999988887
Q ss_pred Hhhc--CCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEE
Q 040467 233 SRKL--GRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFI 310 (387)
Q Consensus 233 ~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l 310 (387)
.+.. .+++++|||++...... ..+..+.++.+||++++++++|||||||+...+.+++++++++|++.+++||
T Consensus 227 ~~~~~~~~~v~~vGpl~~~~~~~-----~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~l 301 (480)
T 2vch_A 227 QEPGLDKPPVYPVGPLVNIGKQE-----AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFL 301 (480)
T ss_dssp HSCCTTCCCEEECCCCCCCSCSC-----C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HhcccCCCcEEEEeccccccccc-----cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEE
Confidence 6521 26899999998653110 0023567899999998778999999999998899999999999999999999
Q ss_pred EEEcCCCCC------CC--CcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcC
Q 040467 311 WVVKPPLGF------DM--NSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHR 382 (387)
Q Consensus 311 ~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~G 382 (387)
|+++.+... +. ..+. . ..+|+++.++++ ..++++.+|+||.+||+|++|++|||||||||++||+++|
T Consensus 302 w~~~~~~~~~~~~~~~~~~~~~~-~-~~lp~~~~~~~~--~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~G 377 (480)
T 2vch_A 302 WVIRSPSGIANSSYFDSHSQTDP-L-TFLPPGFLERTK--KRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSG 377 (480)
T ss_dssp EEECCCCSSTTTTTTCC--CSCG-G-GGSCTTHHHHTT--TTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHT
T ss_pred EEECCccccccccccccccccch-h-hhcCHHHHHHhC--CCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcC
Confidence 999865310 00 0001 0 237888888887 7778886799999999999999999999999999999999
Q ss_pred CcccC
Q 040467 383 VPIIG 387 (387)
Q Consensus 383 vP~l~ 387 (387)
||||+
T Consensus 378 vP~i~ 382 (480)
T 2vch_A 378 IPLIA 382 (480)
T ss_dssp CCEEE
T ss_pred CCEEe
Confidence 99985
No 4
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.9e-48 Score=368.00 Aligned_cols=348 Identities=28% Similarity=0.453 Sum_probs=254.0
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeCCcch-----hhhhhcCCCCCCeeEEeccCCCCCCCCCCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNTPSNL-----KKLKSSLPQNSSIHLREIPFDGIAHDLPPC 76 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 76 (387)
+++||+++|+|++||++|+++||++|++ | ||+|||++++.+. +.+.+......+++|..+|.. .++.
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~-r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~----~~~~- 81 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTN-HDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEV----EPPP- 81 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHH-TCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCC----CCCC-
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHh-cCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCC----CCCc-
Confidence 3579999999999999999999999999 8 9999999988753 223221111158999998742 1221
Q ss_pred CCCCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHHH
Q 040467 77 TENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFY 156 (387)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~ 156 (387)
.+.. ...... +...+....+.++++++++. .. +||+||+|.++.|+..+|+++|||++.++++++.....+.
T Consensus 82 ~~~~---~~~~~~-~~~~~~~~~~~~~~ll~~~~---~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~ 153 (463)
T 2acv_A 82 QELL---KSPEFY-ILTFLESLIPHVKATIKTIL---SN-KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLML 153 (463)
T ss_dssp GGGG---GSHHHH-HHHHHHHTHHHHHHHHHHHC---CT-TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHH
T ss_pred cccc---CCccHH-HHHHHHhhhHHHHHHHHhcc---CC-CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHH
Confidence 1000 000111 55555667778888888741 11 7999999999999999999999999999999888776665
Q ss_pred HhhhcC---CCCCCC----cccCCCC-CCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHH
Q 040467 157 SLWLNL---PHRDSD----EFLLPDF-PEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIG 228 (387)
Q Consensus 157 ~~~~~~---p~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~ 228 (387)
+.+... +....+ ...+|++ +. +...+++..+..+ ......+.+.....+.++++++||+.+||++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~~---~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~ 227 (463)
T 2acv_A 154 SLKNRQIEEVFDDSDRDHQLLNIPGISNQ---VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSS 227 (463)
T ss_dssp HGGGSCTTCCCCCSSGGGCEECCTTCSSC---EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHH
T ss_pred HHHhhcccCCCCCccccCceeECCCCCCC---CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHH
Confidence 443221 100111 2345665 43 4444555444332 12444444555666788899999999999998
Q ss_pred HHHHHhhc--CCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCc-CCCHHHHHHHHHHHHhC
Q 040467 229 LMYFSRKL--GRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQN-TIAASQMMQLAMALEAC 305 (387)
Q Consensus 229 ~~~~~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~a~~~~ 305 (387)
++.+++.. ++++++|||+........ ....+..+.++.+||+.++++++|||||||+. ..+.+++.+++++|++.
T Consensus 228 ~~~l~~~~~p~~~v~~vGpl~~~~~~~~--~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~ 305 (463)
T 2acv_A 228 IDALYDHDEKIPPIYAVGPLLDLKGQPN--PKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHS 305 (463)
T ss_dssp HHHHHHHCTTSCCEEECCCCCCSSCCCB--TTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCcEEEeCCCcccccccc--cccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhC
Confidence 88887765 679999999986531000 00001345789999999877899999999999 88889999999999999
Q ss_pred CCcEEEEEcCCCCCCCCcchhcccCCchhHHHHh--ccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCC
Q 040467 306 GKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERI--KDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRV 383 (387)
Q Consensus 306 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~Gv 383 (387)
+++|||+++.+. +.+++++.+++ + .|+++++|+||.+||+|+++++||||||+||+.||+++||
T Consensus 306 ~~~~l~~~~~~~-----------~~l~~~~~~~~~~~---~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~Gv 371 (463)
T 2acv_A 306 GVRFLWSNSAEK-----------KVFPEGFLEWMELE---GKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGV 371 (463)
T ss_dssp TCEEEEECCCCG-----------GGSCTTHHHHHHHH---CSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTC
T ss_pred CCcEEEEECCCc-----------ccCChhHHHhhccC---CCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCC
Confidence 999999998641 12667776665 4 3677779999999999999999999999999999999999
Q ss_pred cccC
Q 040467 384 PIIG 387 (387)
Q Consensus 384 P~l~ 387 (387)
|||+
T Consensus 372 P~i~ 375 (463)
T 2acv_A 372 PILT 375 (463)
T ss_dssp CEEE
T ss_pred Ceee
Confidence 9985
No 5
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.2e-47 Score=361.53 Aligned_cols=351 Identities=24% Similarity=0.386 Sum_probs=244.4
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCc--EEEEEeCCcchhhhhhcCCC--CCCeeEEeccCCCCCCCCCCCCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRY--TITFVNTPSNLKKLKSSLPQ--NSSIHLREIPFDGIAHDLPPCTE 78 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh--~Vt~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~ 78 (387)
+++.||+++|+|++||++|+++||++|++ ||| .|||++++.+.+.+.+.... ..+++|..++ ++++...+
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~-rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~-----~glp~~~~ 78 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAA-AAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDIS-----DGVPEGYV 78 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHH-HCTTSEEEEEECHHHHHHHC-------CTTEEEEECC-----CCCCTTCC
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHh-CCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCC-----CCCCCccc
Confidence 45689999999999999999999999999 864 56888887655544432211 1578898876 34555432
Q ss_pred CCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHHHHh
Q 040467 79 NSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSL 158 (387)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 158 (387)
.. .........+. +...+.++++++++..+... +|||||+|.++.|+..+|+++|||++.++++++.......+.
T Consensus 79 ~~-~~~~~~~~~~~---~~~~~~~~~~l~~l~~~~~~-~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 153 (456)
T 2c1x_A 79 FA-GRPQEDIELFT---RAAPESFRQGMVMAVAETGR-PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYI 153 (456)
T ss_dssp CC-CCTTHHHHHHH---HHHHHHHHHHHHHHHHHHTC-CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTH
T ss_pred cc-CChHHHHHHHH---HHhHHHHHHHHHHHHhccCC-CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhh
Confidence 21 11111122222 22334445555443321122 799999999999999999999999999999987766544321
Q ss_pred hh-----cCCC--CC-CCc-ccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHH
Q 040467 159 WL-----NLPH--RD-SDE-FLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGL 229 (387)
Q Consensus 159 ~~-----~~p~--~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~ 229 (387)
.. ..+. .. ... ..+|+++. ++.++++..+........+.+.+.+.......++++++||+.+||++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~ 230 (456)
T 2c1x_A 154 DEIREKIGVSGIQGREDELLNFIPGMSK---VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLT 230 (456)
T ss_dssp HHHHHHHCSSCCTTCTTCBCTTSTTCTT---CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHH
T ss_pred HHHHhccCCcccccccccccccCCCCCc---ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHH
Confidence 10 1111 00 111 23566654 4555555433322222334444555555567789999999999999999
Q ss_pred HHHHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcE
Q 040467 230 MYFSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNF 309 (387)
Q Consensus 230 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~ 309 (387)
+.++..+ +++++|||+....... ....+.++.+||+.++++++|||||||+...+.+++.++++++++.+++|
T Consensus 231 ~~~~~~~-~~~~~vGpl~~~~~~~------~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~ 303 (456)
T 2c1x_A 231 NDLKSKL-KTYLNIGPFNLITPPP------VVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPF 303 (456)
T ss_dssp HHHHHHS-SCEEECCCHHHHC---------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCE
T ss_pred HHHHhcC-CCEEEecCcccCcccc------cccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeE
Confidence 8888877 6899999998643110 01224568899998877899999999999888899999999999999999
Q ss_pred EEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 310 IWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
||+++... . ..+++++.++. +.|+++++|+||.++|+|+++++||||||+||+.||+++|||||+
T Consensus 304 lw~~~~~~-------~---~~l~~~~~~~~---~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~ 368 (456)
T 2c1x_A 304 IWSLRDKA-------R---VHLPEGFLEKT---RGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLIC 368 (456)
T ss_dssp EEECCGGG-------G---GGSCTTHHHHH---TTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred EEEECCcc-------h---hhCCHHHHhhc---CCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEe
Confidence 99997652 0 23677776664 568888899999999999999999999999999999999999985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-37 Score=291.79 Aligned_cols=325 Identities=18% Similarity=0.208 Sum_probs=205.9
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSD 81 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 81 (387)
||+++||+|++.+++||++|+++||++|++ +||+|+|++++.+.+.+++ .+++|+.++. .++.......
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~-----~~~~~~~~~~ 77 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVA-RGHRVSYAITDEFAAQVKA-----AGATPVVYDS-----ILPKESNPEE 77 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCEEEECCC-----CSCCTTCTTC
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEecCc-----cccccccchh
Confidence 466679999999999999999999999999 9999999999999888888 6778887763 2222111100
Q ss_pred CCCCCchhH----HHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHHHH
Q 040467 82 SLPFHLFPN----FFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYS 157 (387)
Q Consensus 82 ~~~~~~~~~----~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~ 157 (387)
..+. .... +......+.+.+.+++++. +||+||+|.+..++..+|+++|||++.+++.+.........
T Consensus 78 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~ 149 (424)
T 2iya_A 78 SWPE-DQESAMGLFLDEAVRVLPQLEDAYADD-------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEED 149 (424)
T ss_dssp CCCS-SHHHHHHHHHHHHHHHHHHHHHHTTTS-------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHH
T ss_pred hcch-hHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccc
Confidence 0111 1112 2222233444455555544 89999999998899999999999999988665311111000
Q ss_pred hhhcC-CCCC-CCcccCC-CCCCCcccCccccchhhhhcCCCChhHHHHHHH------hhhhccCcEEEEechhhhcHHH
Q 040467 158 LWLNL-PHRD-SDEFLLP-DFPEASRIHVTQMTKFLRLADGSDSLSVFFQKV------LPQWMNADGILFNTVEELDKIG 228 (387)
Q Consensus 158 ~~~~~-p~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~le~~~ 228 (387)
+.... +... +.....+ +......+.. ..+..... ...+.+.+.+. .......+.++.++...++++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~- 224 (424)
T 2iya_A 150 VPAVQDPTADRGEEAAAPAGTGDAEEGAE-AEDGLVRF---FTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK- 224 (424)
T ss_dssp SGGGSCCCC----------------------HHHHHHH---HHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-
T ss_pred cccccccccccccccccccccccchhhhc-cchhHHHH---HHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-
Confidence 00000 0000 0000000 0000000000 00000000 00111111110 011124567888998888865
Q ss_pred HHHHHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCc
Q 040467 229 LMYFSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKN 308 (387)
Q Consensus 229 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~ 308 (387)
...++++++++||+...+ .+..+|++..+++++|||++||......+.+..+++++++.+++
T Consensus 225 ----~~~~~~~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 286 (424)
T 2iya_A 225 ----GDTVGDNYTFVGPTYGDR--------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWH 286 (424)
T ss_dssp ----GGGCCTTEEECCCCCCCC--------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSE
T ss_pred ----ccCCCCCEEEeCCCCCCc--------------ccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcE
Confidence 356788999999976432 12347877665678999999999866678899999999998999
Q ss_pred EEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 309 FIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 309 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
++|.++... ..+.+ ...++|+.+.+|+||.++|+|++ +||||||+||+.||+++|||+|+
T Consensus 287 ~~~~~g~~~-------------~~~~~----~~~~~~v~~~~~~~~~~~l~~~d--~~v~~~G~~t~~Ea~~~G~P~i~ 346 (424)
T 2iya_A 287 VVLSVGRFV-------------DPADL----GEVPPNVEVHQWVPQLDILTKAS--AFITHAGMGSTMEALSNAVPMVA 346 (424)
T ss_dssp EEEECCTTS-------------CGGGG----CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHTTCCEEE
T ss_pred EEEEECCcC-------------ChHHh----ccCCCCeEEecCCCHHHHHhhCC--EEEECCchhHHHHHHHcCCCEEE
Confidence 999887642 00111 01167899999999999999966 59999999999999999999985
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=6.1e-36 Score=279.05 Aligned_cols=297 Identities=13% Similarity=0.117 Sum_probs=179.4
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCC--CCCCCCCCCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHD--LPPCTENSDS 82 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~ 82 (387)
.|||||++.|++||++|+++||++|++ |||+|||++++.+++.. + .++.+..+........ .+........
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~-rGh~Vt~~t~~~~~~~~-~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRA-LGHEVRYATGGDIRAVA-E-----AGLCAVDVSPGVNYAKLFVPDDTDVTDP 94 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECSSTHHHH-T-----TTCEEEESSTTCCSHHHHSCCC------
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHH-CCCEEEEEeCcchhhHH-h-----cCCeeEecCCchhHhhhccccccccccc
Confidence 579999999999999999999999999 99999999998887644 4 4556776643211100 0110000000
Q ss_pred CC--CCchhHHH----HHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHHH
Q 040467 83 LP--FHLFPNFF----ESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFY 156 (387)
Q Consensus 83 ~~--~~~~~~~~----~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~ 156 (387)
.. ......+. .........+.++++++ +||+||+|.+..++..+|+++|||++.+...+........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~ 167 (400)
T 4amg_A 95 MHSEGLGEGFFAEMFARVSAVAVDGALRTARSW-------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLG 167 (400)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEECcchHHHHHHHHHcCCCceeecccccccccchh
Confidence 00 00111111 11233445556667777 9999999999999999999999999987543321111000
Q ss_pred HhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEech-hhhcHHHHHHHHhh
Q 040467 157 SLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTV-EELDKIGLMYFSRK 235 (387)
Q Consensus 157 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~le~~~~~~~~~~ 235 (387)
..... .+.....+................ ..+... .....
T Consensus 168 -------------------------------~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 208 (400)
T 4amg_A 168 -------------------------------ALIRR-----AMSKDYERHGVTGEPTGSVRLTTTPPSVEAL---LPEDR 208 (400)
T ss_dssp -------------------------------HHHHH-----HTHHHHHHTTCCCCCSCEEEEECCCHHHHHT---SCGGG
T ss_pred -------------------------------hHHHH-----HHHHHHHHhCCCcccccchhhcccCchhhcc---Ccccc
Confidence 00000 011111111111111111111111 110000 00001
Q ss_pred cCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCC--HHHHHHHHHHHHhCCCcEEEEE
Q 040467 236 LGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIA--ASQMMQLAMALEACGKNFIWVV 313 (387)
Q Consensus 236 ~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~--~~~~~~~~~a~~~~~~~~l~~~ 313 (387)
..+..+..++... .....+.+|++..+++++|||||||+.... .+.+.++++++++.+.+++|..
T Consensus 209 ~~~~~~~~~~~~~-------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~ 275 (400)
T 4amg_A 209 RSPGAWPMRYVPY-------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTL 275 (400)
T ss_dssp CCTTCEECCCCCC-------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEEC
T ss_pred cCCcccCcccccc-------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEe
Confidence 1122222222211 123455678988888899999999987544 3678889999999999999998
Q ss_pred cCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 314 KPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
++.. ......+ ++|+.+.+|+||.++|+|++ +||||||+||+.||+++|||+|+
T Consensus 276 ~~~~-----------~~~~~~~-------~~~v~~~~~~p~~~lL~~~~--~~v~h~G~~s~~Eal~~GvP~v~ 329 (400)
T 4amg_A 276 GGGD-----------LALLGEL-------PANVRVVEWIPLGALLETCD--AIIHHGGSGTLLTALAAGVPQCV 329 (400)
T ss_dssp CTTC-----------CCCCCCC-------CTTEEEECCCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEE
T ss_pred cCcc-----------ccccccC-------CCCEEEEeecCHHHHhhhhh--heeccCCccHHHHHHHhCCCEEE
Confidence 7653 1111111 78999999999999999955 59999999999999999999985
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.2e-34 Score=268.51 Aligned_cols=309 Identities=13% Similarity=0.064 Sum_probs=191.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPF 85 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (387)
|||+|++.++.||++|+++||++|++ |||+|||++++.+.+.+++ .+++|+.++... ... ...... ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~i~~~~--~~~---~~~~~~-~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRD-LGADVRMCAPPDCAERLAE-----VGVPHVPVGPSA--RAP---IQRAKP-LT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEECCC------------CCSC-CC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHH-----cCCeeeeCCCCH--HHH---hhcccc-cc
Confidence 47999999999999999999999999 9999999999998888888 778899887431 111 011000 00
Q ss_pred CchhHHHHHHhh-hhHHHHHHHHhhhhccCCCCCeEEEeCC-Cchh--hHHHHHHhCCceEEEcchhHHHHHHHHHhhhc
Q 040467 86 HLFPNFFESTLS-FKPHFRKLINGLIDEQNGHKPVCIIADM-FFAW--SAEIAQEYGIFNALFVGGGSFGFACFYSLWLN 161 (387)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~~ll~~~~~~~~~~~pD~vV~D~-~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 161 (387)
...+...... ....++++.+. . . +||+||+|. +..+ +..+|+++|||++.+++++.... ..+
T Consensus 69 --~~~~~~~~~~~~~~~~~~l~~~--~---~-~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~------~~~ 134 (415)
T 1iir_A 69 --AEDVRRFTTEAIATQFDEIPAA--A---E-GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP------SPY 134 (415)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHH--T---T-TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC------CSS
T ss_pred --hHHHHHHHHHHHHHHHHHHHHH--h---c-CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC------Ccc
Confidence 0111111111 12223333321 1 1 899999998 6668 89999999999999987654311 111
Q ss_pred CCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHh------------hhhccCcEEEEechhhhcH-HH
Q 040467 162 LPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVL------------PQWMNADGILFNTVEELDK-IG 228 (387)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~le~-~~ 228 (387)
.|..... +. ++.. .....+...+........+...+.... ...... .++.++...+++ +
T Consensus 135 ~p~~~~~-~~---~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~- 206 (415)
T 1iir_A 135 YPPPPLG-EP---STQD--TIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ- 206 (415)
T ss_dssp SCCCC---------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-
T ss_pred cCCccCC-cc---ccch--HHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-
Confidence 1110000 00 1000 000001000000000000000000000 011122 578888888875 3
Q ss_pred HHHHHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCc
Q 040467 229 LMYFSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKN 308 (387)
Q Consensus 229 ~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~ 308 (387)
+..+ +++++||+.... .+..+.++.+|+++. +++|||++||+. ...+.++.+++++++.+.+
T Consensus 207 ----~~~~--~~~~vG~~~~~~---------~~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~ 268 (415)
T 1iir_A 207 ----PTDL--DAVQTGAWILPD---------ERPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRR 268 (415)
T ss_dssp ----CCSS--CCEECCCCCCCC---------CCCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCC
T ss_pred ----cccC--CeEeeCCCccCc---------ccCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCe
Confidence 2233 799999987643 123567889999875 469999999997 5677888899999999999
Q ss_pred EEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 309 FIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 309 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
++|+++... ... .. .++|+.+.+|+||.++|++ +++||||||+||+.||+++|||+|+
T Consensus 269 ~v~~~g~~~-----------~~~-~~-------~~~~v~~~~~~~~~~~l~~--~d~~v~~~G~~t~~Ea~~~G~P~i~ 326 (415)
T 1iir_A 269 VILSRGWAD-----------LVL-PD-------DGADCFAIGEVNHQVLFGR--VAAVIHHGGAGTTHVAARAGAPQIL 326 (415)
T ss_dssp EEECTTCTT-----------CCC-SS-------CGGGEEECSSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEE
T ss_pred EEEEeCCCc-----------ccc-cC-------CCCCEEEeCcCChHHHHhh--CCEEEeCCChhHHHHHHHcCCCEEE
Confidence 999887653 111 00 1568999999999999977 5569999999999999999999984
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.6e-34 Score=265.72 Aligned_cols=314 Identities=13% Similarity=0.039 Sum_probs=194.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPF 85 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (387)
|||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+++ .+++|..++... .+.+.. . ... ..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~-~Gh~V~~~~~~~~~~~v~~-----~g~~~~~~~~~~-~~~~~~-~--~~~-~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKA-LGVQTRMCAPPAAEERLAE-----VGVPHVPVGLPQ-HMMLQE-G--MPP-PP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----HTCCEEECSCCG-GGCCCT-T--SCC-CC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCeeeecCCCH-HHHHhh-c--ccc-ch
Confidence 47999999999999999999999999 9999999999988888888 677899887431 011111 0 000 00
Q ss_pred CchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCC-Cchh--hHHHHHHhCCceEEEcchhHHHHHHHHHhhhcC
Q 040467 86 HLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADM-FFAW--SAEIAQEYGIFNALFVGGGSFGFACFYSLWLNL 162 (387)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~-~~~~--~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 162 (387)
...+...+... ..++++.+... .. +||+||+|. +.++ +..+|+++|||++.+++++.... ..+.
T Consensus 70 --~~~~~~~~~~~---~~~~~~~l~~~-~~-~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~------~~~~ 136 (416)
T 1rrv_A 70 --PEEEQRLAAMT---VEMQFDAVPGA-AE-GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA------SPHL 136 (416)
T ss_dssp --HHHHHHHHHHH---HHHHHHHHHHH-TT-TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC------CSSS
T ss_pred --hHHHHHHHHHH---HHHHHHHHHHH-hc-CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC------Cccc
Confidence 01111111111 12222222210 11 799999997 4556 88999999999999876653210 0111
Q ss_pred CCCCCCcccC-CCCCCCcccCccccchhhhhcCCCChhHHHHHHH--------hhhhccCcEEEEechhhhcHHHHHHHH
Q 040467 163 PHRDSDEFLL-PDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKV--------LPQWMNADGILFNTVEELDKIGLMYFS 233 (387)
Q Consensus 163 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~le~~~~~~~~ 233 (387)
| .... +.+ +++..+... ........... ......+..... ....... .++.++...++++ +
T Consensus 137 p-~~~~-~~~~~~r~~n~~~-~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~ 206 (416)
T 1rrv_A 137 P-PAYD-EPTTPGVTDIRVL-WEERAARFADR-YGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----Q 206 (416)
T ss_dssp C-CCBC-SCCCTTCCCHHHH-HHHHHHHHHHH-HHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----C
T ss_pred C-CCCC-CCCCchHHHHHHH-HHHHHHHHHHH-hHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----C
Confidence 1 0000 001 110000000 00000000000 000000110000 0111223 6788888888754 1
Q ss_pred hhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcC-CCHHHHHHHHHHHHhCCCcEEEE
Q 040467 234 RKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNT-IAASQMMQLAMALEACGKNFIWV 312 (387)
Q Consensus 234 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~a~~~~~~~~l~~ 312 (387)
..+ +++++||+..... +..+.++.+|+++. +++|||++||+.. ...+.+..+++++++.+.+++|+
T Consensus 207 ~~~--~~~~vG~~~~~~~---------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~ 273 (416)
T 1rrv_A 207 PDV--DAVQTGAWLLSDE---------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILS 273 (416)
T ss_dssp SSC--CCEECCCCCCCCC---------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCC--CeeeECCCccCcc---------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEE
Confidence 222 7999999886531 23567889999876 4699999999864 34566888999999999999999
Q ss_pred EcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 313 VKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
++... ... . ..++|+.+.+|+||.++|++ +++||||||+||+.||+++|||+|+
T Consensus 274 ~g~~~-----------~~~-~-------~~~~~v~~~~~~~~~~ll~~--~d~~v~~~G~~t~~Ea~~~G~P~i~ 327 (416)
T 1rrv_A 274 RGWTE-----------LVL-P-------DDRDDCFAIDEVNFQALFRR--VAAVIHHGSAGTEHVATRAGVPQLV 327 (416)
T ss_dssp CTTTT-----------CCC-S-------CCCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEE
T ss_pred eCCcc-----------ccc-c-------CCCCCEEEeccCChHHHhcc--CCEEEecCChhHHHHHHHcCCCEEE
Confidence 87653 111 1 11678999999999999977 5569999999999999999999984
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.4e-33 Score=260.37 Aligned_cols=295 Identities=13% Similarity=0.068 Sum_probs=191.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPF 85 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (387)
|||+|++.++.||++|+++||++|++ |||+|+|++++.+.+.+++ .+++|..++.+.. .. ... .. ....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~-~Gh~V~v~~~~~~~~~v~~-----~g~~~~~l~~~~~--~~-~~~-~~-~~~~ 69 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRE-LGADARMCLPPDYVERCAE-----VGVPMVPVGRAVR--AG-ARE-PG-ELPP 69 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHH-TTCCEEEEECGGGHHHHHH-----TTCCEEECSSCSS--GG-GSC-TT-CCCT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHH-CCCeEEEEeCHHHHHHHHH-----cCCceeecCCCHH--HH-hcc-cc-CCHH
Confidence 46999999999999999999999999 9999999999999999999 7778998875311 11 000 00 0011
Q ss_pred CchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhh---HHHHHHhCCceEEEcchhHHHHHHHHHhhhcC
Q 040467 86 HLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWS---AEIAQEYGIFNALFVGGGSFGFACFYSLWLNL 162 (387)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~---~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 162 (387)
.....+...+......+.++++ +||+||+|.....+ ..+|+++|||++.+...+....+.
T Consensus 70 ~~~~~~~~~~~~~~~~l~~~~~---------~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~-------- 132 (404)
T 3h4t_A 70 GAAEVVTEVVAEWFDKVPAAIE---------GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSE-------- 132 (404)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHT---------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGG--------
T ss_pred HHHHHHHHHHHHHHHHHHHHhc---------CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCCh--------
Confidence 1112333333333333333321 69999999766544 688999999999887655421000
Q ss_pred CCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhh--h---------ccCcEEEEechhhhcHHHHHH
Q 040467 163 PHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQ--W---------MNADGILFNTVEELDKIGLMY 231 (387)
Q Consensus 163 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~~le~~~~~~ 231 (387)
.. . ..+..........+.+.+.+.... + ...+..+.+....+.+.
T Consensus 133 -----------~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~---- 188 (404)
T 3h4t_A 133 -----------QS--------Q-AERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL---- 188 (404)
T ss_dssp -----------SC--------H-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC----
T ss_pred -----------hH--------H-HHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC----
Confidence 00 0 000000000000000000000000 0 00122333444444432
Q ss_pred HHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEE
Q 040467 232 FSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIW 311 (387)
Q Consensus 232 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~ 311 (387)
..++++++++|++..+. ....++++.+|++.. +++|||++||+.. ..+.+..+++++++.+.++||
T Consensus 189 --~~~~~~~~~~G~~~~~~---------~~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~ 254 (404)
T 3h4t_A 189 --RPTDLGTVQTGAWILPD---------QRPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVL 254 (404)
T ss_dssp --CTTCCSCCBCCCCCCCC---------CCCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEE
T ss_pred --CCCCCCeEEeCccccCC---------CCCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEE
Confidence 34667889999876543 134678888999854 5699999999987 677888999999999999999
Q ss_pred EEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 312 VVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
+.+... ..... .++|+.+.+|+||.++|++ +++||||||+||+.||+++|||+|+
T Consensus 255 ~~g~~~-----------~~~~~--------~~~~v~~~~~~~~~~ll~~--~d~~v~~gG~~t~~Eal~~GvP~v~ 309 (404)
T 3h4t_A 255 SSGWAG-----------LGRID--------EGDDCLVVGEVNHQVLFGR--VAAVVHHGGAGTTTAVTRAGAPQVV 309 (404)
T ss_dssp ECTTTT-----------CCCSS--------CCTTEEEESSCCHHHHGGG--SSEEEECCCHHHHHHHHHHTCCEEE
T ss_pred EeCCcc-----------ccccc--------CCCCEEEecCCCHHHHHhh--CcEEEECCcHHHHHHHHHcCCCEEE
Confidence 988653 11111 1678999999999999998 5569999999999999999999984
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=7.4e-32 Score=251.48 Aligned_cols=311 Identities=16% Similarity=0.156 Sum_probs=194.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPF 85 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (387)
+||+|++.++.||++|++.||++|++ +||+|+|++++.+.+.+++ .++++..++.+.. ..............
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~--~~~~~~~~~~~~~~ 76 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELAR-RGHRITYVTTPLFADEVKA-----AGAEVVLYKSEFD--TFHVPEVVKQEDAE 76 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----TTCEEEECCCGGG--TSSSSSSSCCTTHH
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHh-CCCEEEEEcCHHHHHHHHH-----cCCEEEecccccc--cccccccccccchH
Confidence 48999999999999999999999999 9999999999999999998 7788998874211 10000000000000
Q ss_pred CchhH-HHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeC-CCchhhHHHHHHhCCceEEEcchhHHHHHH----HHHhh
Q 040467 86 HLFPN-FFESTLSFKPHFRKLINGLIDEQNGHKPVCIIAD-MFFAWSAEIAQEYGIFNALFVGGGSFGFAC----FYSLW 159 (387)
Q Consensus 86 ~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D-~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~----~~~~~ 159 (387)
..+.. +........+.+.+++++. +||+||+| .+..++..+|+++|||++.+.+........ .....
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~~~~~ 149 (402)
T 3ia7_A 77 TQLHLVYVRENVAILRAAEEALGDN-------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKS 149 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTC-------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccccccccccc
Confidence 01111 2222233344555556555 89999999 788889999999999999876322110000 00000
Q ss_pred hcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhc-cCcEEEEechhhhcHHHHHHHHhhcCC
Q 040467 160 LNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWM-NADGILFNTVEELDKIGLMYFSRKLGR 238 (387)
Q Consensus 160 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~~~~~~~~ 238 (387)
.. ...+.........+...+......... ..... ..+..+......+++. ...++.
T Consensus 150 ~~-----------~~~~~~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~ 206 (402)
T 3ia7_A 150 NG-----------QRHPADVEAVHSVLVDLLGKYGVDTPV-------KEYWDEIEGLTIVFLPKSFQPF-----AETFDE 206 (402)
T ss_dssp HT-----------CCCGGGSHHHHHHHHHHHHTTTCCSCH-------HHHHTCCCSCEEESSCGGGSTT-----GGGCCT
T ss_pred cc-----------ccChhhHHHHHHHHHHHHHHcCCCCCh-------hhhhcCCCCeEEEEcChHhCCc-----cccCCC
Confidence 00 000000000000111111111110000 00111 1144555555555433 456778
Q ss_pred CeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCC
Q 040467 239 PVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLG 318 (387)
Q Consensus 239 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~ 318 (387)
+++++||..... .+..+|+...+++++||+++||......+.+..+++++++.+.+++|.++.+.
T Consensus 207 ~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 271 (402)
T 3ia7_A 207 RFAFVGPTLTGR--------------DGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFL- 271 (402)
T ss_dssp TEEECCCCCCC------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTS-
T ss_pred CeEEeCCCCCCc--------------ccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcC-
Confidence 899999977543 12345665455578999999999877778899999999998999999887642
Q ss_pred CCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 319 FDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
..+.+ ...++|+.+.+|+|+.++|++++ ++|||||+||+.||+++|+|+|+
T Consensus 272 ------------~~~~~----~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~ 322 (402)
T 3ia7_A 272 ------------DPAVL----GPLPPNVEAHQWIPFHSVLAHAR--ACLTHGTTGAVLEAFAAGVPLVL 322 (402)
T ss_dssp ------------CGGGG----CSCCTTEEEESCCCHHHHHTTEE--EEEECCCHHHHHHHHHTTCCEEE
T ss_pred ------------Chhhh----CCCCCcEEEecCCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEE
Confidence 00111 11167999999999999999966 59999999999999999999983
No 12
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=3.7e-32 Score=254.70 Aligned_cols=309 Identities=12% Similarity=0.135 Sum_probs=198.6
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCC---CCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTE---NSD 81 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~ 81 (387)
++||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+++ .++.+..++.+ ++.... ...
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~-~Gh~V~v~~~~~~~~~~~~-----~G~~~~~~~~~-----~~~~~~~~~~~~ 88 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVR-RGHRVSYVTAGGFAEPVRA-----AGATVVPYQSE-----IIDADAAEVFGS 88 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCS-----TTTCCHHHHHHS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----cCCEEEecccc-----ccccccchhhcc
Confidence 358999999999999999999999999 9999999999999999998 77899988742 111100 000
Q ss_pred CCCCCchhH-HHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeC-CCchhhHHHHHHhCCceEEEcchhHHHHH--H--H
Q 040467 82 SLPFHLFPN-FFESTLSFKPHFRKLINGLIDEQNGHKPVCIIAD-MFFAWSAEIAQEYGIFNALFVGGGSFGFA--C--F 155 (387)
Q Consensus 82 ~~~~~~~~~-~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D-~~~~~~~~~a~~lgiP~v~~~~~~~~~~~--~--~ 155 (387)
......+.. +..........+.++++++ +||+||+| ....++..+|+++|||++.+.+....... . .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~~~~~ 161 (415)
T 3rsc_A 89 DDLGVRPHLMYLRENVSVLRATAEALDGD-------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHYSFSQD 161 (415)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHSSS-------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSCCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCccccccc
Confidence 001111111 2222233445555666665 89999999 78888999999999999987643211000 0 0
Q ss_pred HHhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhc-cCcEEEEechhhhcHHHHHHHHh
Q 040467 156 YSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWM-NADGILFNTVEELDKIGLMYFSR 234 (387)
Q Consensus 156 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~~~~ 234 (387)
.... + ....+.........+...+......... ..... ..+..+......+++. ..
T Consensus 162 ~~~~-~----------~~~~p~~~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~~l~~~~~~~~~~-----~~ 218 (415)
T 3rsc_A 162 MVTL-A----------GTIDPLDLPVFRDTLRDLLAEHGLSRSV-------VDCWNHVEQLNLVFVPKAFQIA-----GD 218 (415)
T ss_dssp HHHH-H----------TCCCGGGCHHHHHHHHHHHHHTTCCCCH-------HHHHTCCCSEEEESSCTTTSTT-----GG
T ss_pred cccc-c----------ccCChhhHHHHHHHHHHHHHHcCCCCCh-------hhhhcCCCCeEEEEcCcccCCC-----cc
Confidence 0000 0 0000000000000111111111110000 00111 1255665555555533 56
Q ss_pred hcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEEEc
Q 040467 235 KLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVK 314 (387)
Q Consensus 235 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~~~ 314 (387)
.++.+++++||..... .+..+|....+++++|||++||......+.+..+++++++.+.+++|.++
T Consensus 219 ~~~~~~~~vGp~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g 284 (415)
T 3rsc_A 219 TFDDRFVFVGPCFDDR--------------RFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLG 284 (415)
T ss_dssp GCCTTEEECCCCCCCC--------------GGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECT
T ss_pred cCCCceEEeCCCCCCc--------------ccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeC
Confidence 6788899999987543 23345665555578999999999877778899999999998999999887
Q ss_pred CCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 315 PPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
.+. ..+.+ ...++|+.+.+|+||.++|++++ +||||||+||+.||+++|+|+|+
T Consensus 285 ~~~-------------~~~~l----~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~v~ 338 (415)
T 3rsc_A 285 GQV-------------DPAAL----GDLPPNVEAHRWVPHVKVLEQAT--VCVTHGGMGTLMEALYWGRPLVV 338 (415)
T ss_dssp TTS-------------CGGGG----CCCCTTEEEESCCCHHHHHHHEE--EEEESCCHHHHHHHHHTTCCEEE
T ss_pred CCC-------------ChHHh----cCCCCcEEEEecCCHHHHHhhCC--EEEECCcHHHHHHHHHhCCCEEE
Confidence 642 00111 11167999999999999999965 59999999999999999999984
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=9.3e-31 Score=246.30 Aligned_cols=314 Identities=15% Similarity=0.169 Sum_probs=192.6
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDS 82 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 82 (387)
|+++||+|++.++.||++|+++||++|++ +||+|++++++...+.+.+ .+++++.++.. .+........
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~-~G~~V~~~~~~~~~~~~~~-----~g~~~~~~~~~-----~~~~~~~~~~ 73 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVA-RGHRVTYAIPPVFADKVAA-----TGPRPVLYHST-----LPGPDADPEA 73 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TSCEEEECCCC-----SCCTTSCGGG
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHH-CCCeEEEEeCHHHHHHHHh-----CCCEEEEcCCc-----Cccccccccc
Confidence 44568999999999999999999999999 9999999999988877777 67788877632 1111110000
Q ss_pred CCCCchhHH----HHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHHHHh
Q 040467 83 LPFHLFPNF----FESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSL 158 (387)
Q Consensus 83 ~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~ 158 (387)
.. ...... ..........+.+++++. +||+||+|....++..+|+++|||++.+++...........+
T Consensus 74 ~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~ 145 (430)
T 2iyf_A 74 WG-STLLDNVEPFLNDAIQALPQLADAYADD-------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEV 145 (430)
T ss_dssp GC-SSHHHHHHHHHHHHHHHHHHHHHHHTTS-------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHT
T ss_pred cc-hhhHHHHHHHHHHHHHHHHHHHHHhhcc-------CCCEEEECCccHHHHHHHHHcCCCEEEEeccccccccccccc
Confidence 00 011111 122233344555566555 899999999878899999999999998875432000000000
Q ss_pred hhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHHHhhcCC
Q 040467 159 WLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYFSRKLGR 238 (387)
Q Consensus 159 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~ 238 (387)
..... + .....+. .......+...+......... .......+.+++++...++.. ...+++
T Consensus 146 ~~~~~----~--~~~~~~~-~~~~~~~~~~~~~~~g~~~~~-------~~~~~~~~~~l~~~~~~~~~~-----~~~~~~ 206 (430)
T 2iyf_A 146 AEPMW----R--EPRQTER-GRAYYARFEAWLKENGITEHP-------DTFASHPPRSLVLIPKALQPH-----ADRVDE 206 (430)
T ss_dssp HHHHH----H--HHHHSHH-HHHHHHHHHHHHHHTTCCSCH-------HHHHHCCSSEEECSCGGGSTT-----GGGSCT
T ss_pred ccchh----h--hhccchH-HHHHHHHHHHHHHHhCCCCCH-------HHHhcCCCcEEEeCcHHhCCC-----cccCCC
Confidence 00000 0 0000000 000000001111100000000 011124567888888777754 245667
Q ss_pred C-eEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhC-CCcEEEEEcCC
Q 040467 239 P-VWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEAC-GKNFIWVVKPP 316 (387)
Q Consensus 239 ~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~-~~~~l~~~~~~ 316 (387)
+ ++++||....+ .+..+|.+..+++++||+++||+.....+.+..+++++++. +.+++|.++.+
T Consensus 207 ~~v~~vG~~~~~~--------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~ 272 (430)
T 2iyf_A 207 DVYTFVGACQGDR--------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRK 272 (430)
T ss_dssp TTEEECCCCC-------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC--
T ss_pred ccEEEeCCcCCCC--------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCC
Confidence 7 99999866432 01235665444578999999999855678888899999885 88898888764
Q ss_pred CCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 317 LGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
. ..+.+ ...++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|+
T Consensus 273 ~-------------~~~~l----~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~ 324 (430)
T 2iyf_A 273 V-------------TPAEL----GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIA 324 (430)
T ss_dssp --------------CGGGG----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEE
T ss_pred C-------------ChHHh----ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEE
Confidence 2 00111 111678999999999999999764 9999999999999999999984
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.97 E-value=1.1e-30 Score=246.41 Aligned_cols=305 Identities=13% Similarity=0.128 Sum_probs=178.1
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCC-CC---
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTE-NS--- 80 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~--- 80 (387)
.+||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+++ .+++|..++.....+++..... ..
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~-~GheV~~~~~~~~~~~v~~-----~G~~~~~i~~~~~~~~~~~~~~~~~~~~ 93 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRA-AGHEVRVVASPALTEDITA-----AGLTAVPVGTDVDLVDFMTHAGHDIIDY 93 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHH-TTCEEEEEECGGGHHHHHT-----TTCCEEECSCCCCHHHHHHHTTHHHHHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHH-CCCeEEEEeCchhHHHHHh-----CCCceeecCCccchHHHhhhhhcccccc
Confidence 358999999999999999999999999 9999999999998888888 7788998874310001000000 00
Q ss_pred ---CCC----CC-CchhHH---HHHH----h-----h-hhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCC
Q 040467 81 ---DSL----PF-HLFPNF---FEST----L-----S-FKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGI 139 (387)
Q Consensus 81 ---~~~----~~-~~~~~~---~~~~----~-----~-~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgi 139 (387)
.+. +. ..+..+ +..+ . . ....+.++++++ +||+||+|.+..++..+|+++||
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~aA~~lgi 166 (441)
T 2yjn_A 94 VRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-------RPDLVIWEPLTFAAPIAAAVTGT 166 (441)
T ss_dssp HTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHHTC
T ss_pred cccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-------CCCEEEecCcchhHHHHHHHcCC
Confidence 000 10 011111 1111 1 1 333444455556 89999999988889999999999
Q ss_pred ceEEEcchhHHHHHH---HHHhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhh-----hhc
Q 040467 140 FNALFVGGGSFGFAC---FYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLP-----QWM 211 (387)
Q Consensus 140 P~v~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 211 (387)
|++.+...+...... ......+.+ ... .. ..+... +.+...+... ...
T Consensus 167 P~v~~~~~~~~~~~~~~~~~~~~~~~~----------~~~----~~-~~~~~~---------l~~~~~~~g~~~~~~~~~ 222 (441)
T 2yjn_A 167 PHARLLWGPDITTRARQNFLGLLPDQP----------EEH----RE-DPLAEW---------LTWTLEKYGGPAFDEEVV 222 (441)
T ss_dssp CEEEECSSCCHHHHHHHHHHHHGGGSC----------TTT----CC-CHHHHH---------HHHHHHHTTCCCCCGGGT
T ss_pred CEEEEecCCCcchhhhhhhhhhccccc----------ccc----cc-chHHHH---------HHHHHHHcCCCCCCcccc
Confidence 999986544321111 111111111 000 00 000000 1111111000 000
Q ss_pred cCcEEEEechhhhcHHHHHHHHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCC-
Q 040467 212 NADGILFNTVEELDKIGLMYFSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTI- 290 (387)
Q Consensus 212 ~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~- 290 (387)
..+..+......++++ ..++. ..+++... ..+.++.+|++..+++++|||++||+...
T Consensus 223 ~~~~~l~~~~~~~~~~------~~~~~--~~~~~~~~-------------~~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 281 (441)
T 2yjn_A 223 VGQWTIDPAPAAIRLD------TGLKT--VGMRYVDY-------------NGPSVVPEWLHDEPERRRVCLTLGISSREN 281 (441)
T ss_dssp SCSSEEECSCGGGSCC------CCCCE--EECCCCCC-------------CSSCCCCGGGSSCCSSCEEEEEC-------
T ss_pred CCCeEEEecCccccCC------CCCCC--CceeeeCC-------------CCCcccchHhhcCCCCCEEEEECCCCcccc
Confidence 1233444333333321 11210 11222110 12345678998665678999999998754
Q ss_pred --CHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeee
Q 040467 291 --AASQMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLS 368 (387)
Q Consensus 291 --~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~ 368 (387)
..+.+..+++++++.++++||+.++.. . +.+. ..++|+.+.+|+||.++|++++ +|||
T Consensus 282 ~~~~~~~~~~~~al~~~~~~~v~~~g~~~-------~---~~l~--------~~~~~v~~~~~~~~~~ll~~ad--~~V~ 341 (441)
T 2yjn_A 282 SIGQVSIEELLGAVGDVDAEIIATFDAQQ-------L---EGVA--------NIPDNVRTVGFVPMHALLPTCA--ATVH 341 (441)
T ss_dssp ---CCSTTTTHHHHHTSSSEEEECCCTTT-------T---SSCS--------SCCSSEEECCSCCHHHHGGGCS--EEEE
T ss_pred cChHHHHHHHHHHHHcCCCEEEEEECCcc-------h---hhhc--------cCCCCEEEecCCCHHHHHhhCC--EEEE
Confidence 235577789999999999999887542 0 1121 1167999999999999998854 6999
Q ss_pred ccChhHHHHHHHcCCcccC
Q 040467 369 HCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 369 HGG~~s~~eal~~GvP~l~ 387 (387)
|||+||+.||+++|||+|+
T Consensus 342 ~~G~~t~~Ea~~~G~P~i~ 360 (441)
T 2yjn_A 342 HGGPGSWHTAAIHGVPQVI 360 (441)
T ss_dssp CCCHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHhCCCEEE
Confidence 9999999999999999984
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.96 E-value=6.9e-29 Score=230.01 Aligned_cols=288 Identities=15% Similarity=0.102 Sum_probs=183.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCC---CCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPP---CTENSDS 82 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~ 82 (387)
|||++++.++.||++|+++||++|++ +||+|++++++...+.+++ .++.+..++.....+.+.. .......
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~-~Gh~V~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARN-AGHQVVMAANQDMGPVVTG-----VGLPAVATTDLPIRHFITTDREGRPEAIP 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCCEEESCSSCHHHHHHBCTTSCBCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHH-CCCEEEEEeCHHHHHHHHh-----CCCEEEEeCCcchHHHHhhhcccCccccC
Confidence 47999999999999999999999999 9999999999888878887 6778887764210000000 0000000
Q ss_pred CCC-CchhHH----H-HHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHHHH
Q 040467 83 LPF-HLFPNF----F-ESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFACFY 156 (387)
Q Consensus 83 ~~~-~~~~~~----~-~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~ 156 (387)
.. .....+ + .........+.+++++. +||+||+|.+..++..+|+.+|||++.+...+..
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------ 140 (384)
T 2p6p_A 75 -SDPVAQARFTGRWFARMAASSLPRMLDFSRAW-------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------ 140 (384)
T ss_dssp -CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC------
T ss_pred -cchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc------
Confidence 00 001111 1 11122344455566666 8999999998888889999999999987532110
Q ss_pred HhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHH-hhhhccCcEEEEechhhhcHHHHHHHHhh
Q 040467 157 SLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKV-LPQWMNADGILFNTVEELDKIGLMYFSRK 235 (387)
Q Consensus 157 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~le~~~~~~~~~~ 235 (387)
... + ..... ....+...+. .......+.++.++...++++ ..
T Consensus 141 ---------------~~~------~-----~~~~~-----~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~------~~ 183 (384)
T 2p6p_A 141 ---------------ADG------I-----HPGAD-----AELRPELSELGLERLPAPDLFIDICPPSLRPA------NA 183 (384)
T ss_dssp ---------------CTT------T-----HHHHH-----HHTHHHHHHTTCSSCCCCSEEEECSCGGGSCT------TS
T ss_pred ---------------cch------h-----hHHHH-----HHHHHHHHHcCCCCCCCCCeEEEECCHHHCCC------CC
Confidence 000 0 00000 0011111110 000111567788887777643 12
Q ss_pred cC-CCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCC-----CHHHHHHHHHHHHhCCCcE
Q 040467 236 LG-RPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTI-----AASQMMQLAMALEACGKNF 309 (387)
Q Consensus 236 ~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~-----~~~~~~~~~~a~~~~~~~~ 309 (387)
++ .++.+++. . .+.++.+|++..+++++|||++||+... ..+.+..+++++++.+.++
T Consensus 184 ~~~~~~~~~~~---~-------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~ 247 (384)
T 2p6p_A 184 APARMMRHVAT---S-------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVEL 247 (384)
T ss_dssp CCCEECCCCCC---C-------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEE
T ss_pred CCCCceEecCC---C-------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEE
Confidence 22 12222211 0 1234567887644567999999999764 4577888999999999999
Q ss_pred EEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 310 IWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 310 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
+|+.+++. .+.+. + . ++|+.+ +|+||.++|+++ ++||||||+||+.||+++|||+|+
T Consensus 248 ~~~~g~~~--------------~~~l~-~-~--~~~v~~-~~~~~~~~l~~~--d~~v~~~G~~t~~Ea~~~G~P~v~ 304 (384)
T 2p6p_A 248 IVAAPDTV--------------AEALR-A-E--VPQARV-GWTPLDVVAPTC--DLLVHHAGGVSTLTGLSAGVPQLL 304 (384)
T ss_dssp EEECCHHH--------------HHHHH-H-H--CTTSEE-ECCCHHHHGGGC--SEEEECSCTTHHHHHHHTTCCEEE
T ss_pred EEEeCCCC--------------HHhhC-C-C--CCceEE-cCCCHHHHHhhC--CEEEeCCcHHHHHHHHHhCCCEEE
Confidence 99876431 01111 1 1 678999 999999999884 569999999999999999999984
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.96 E-value=3.7e-28 Score=226.17 Aligned_cols=291 Identities=11% Similarity=0.081 Sum_probs=184.3
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCC-------C--
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLP-------P-- 75 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-------~-- 75 (387)
+|||+|++.++.||++|+++||++|++ +||+|+++++ .+.+.++. .++.+..++.+......- .
T Consensus 20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~-~GheV~v~~~-~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (398)
T 3oti_A 20 HMRVLFVSSPGIGHLFPLIQLAWGFRT-AGHDVLIAVA-EHADRAAA-----AGLEVVDVAPDYSAVKVFEQVAKDNPRF 92 (398)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEES-SCHHHHHT-----TTCEEEESSTTCCHHHHHHHHHHHCHHH
T ss_pred cCEEEEEcCCCcchHhHHHHHHHHHHH-CCCEEEEecc-chHHHHHh-----CCCeeEecCCccCHHHHhhhcccCCccc
Confidence 468999999999999999999999999 9999999999 88888888 778999887421000000 0
Q ss_pred --CCC-CCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHH
Q 040467 76 --CTE-NSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGF 152 (387)
Q Consensus 76 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~ 152 (387)
... ............+......+...+.++++++ +||+||+|...+++..+|+++|||++.+......
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~-- 163 (398)
T 3oti_A 93 AETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY-------RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR-- 163 (398)
T ss_dssp HHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC--
T ss_pred cccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC--
Confidence 000 0000011111223333356677788888888 9999999988888999999999999986532100
Q ss_pred HHHHHhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHH
Q 040467 153 ACFYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYF 232 (387)
Q Consensus 153 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~ 232 (387)
.. ....... ..+.....+........+..+......+..+
T Consensus 164 -----------------------~~-------~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 203 (398)
T 3oti_A 164 -----------------------TR-------GMHRSIA-----SFLTDLMDKHQVSLPEPVATIESFPPSLLLE----- 203 (398)
T ss_dssp -----------------------CT-------THHHHHH-----TTCHHHHHHTTCCCCCCSEEECSSCGGGGTT-----
T ss_pred -----------------------cc-------chhhHHH-----HHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC-----
Confidence 00 0000000 0011111111111112233333332322211
Q ss_pred HhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCC--CHHHHHHHHHHHHhCCCcEE
Q 040467 233 SRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTI--AASQMMQLAMALEACGKNFI 310 (387)
Q Consensus 233 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--~~~~~~~~~~a~~~~~~~~l 310 (387)
.......+.++ + ...+....+|+...+++++||+++||.... ..+.+..+++++++.+.+++
T Consensus 204 ~~~~~~~~~~~----~------------~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v 267 (398)
T 3oti_A 204 AEPEGWFMRWV----P------------YGGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFV 267 (398)
T ss_dssp SCCCSBCCCCC----C------------CCCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEE
T ss_pred CCCCCCCcccc----C------------CCCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEE
Confidence 00000001111 0 012334567777665678999999999643 55678889999999999999
Q ss_pred EEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 311 WVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
|+.++.. .+.+ ...++|+.+.+|+|+.++|++++ +||||||.||+.||+++|+|+|+
T Consensus 268 ~~~g~~~--------------~~~l----~~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Eal~~G~P~v~ 324 (398)
T 3oti_A 268 LALGDLD--------------ISPL----GTLPRNVRAVGWTPLHTLLRTCT--AVVHHGGGGTVMTAIDAGIPQLL 324 (398)
T ss_dssp EECTTSC--------------CGGG----CSCCTTEEEESSCCHHHHHTTCS--EEEECCCHHHHHHHHHHTCCEEE
T ss_pred EEECCcC--------------hhhh----ccCCCcEEEEccCCHHHHHhhCC--EEEECCCHHHHHHHHHhCCCEEE
Confidence 9987652 0111 01167999999999999999955 59999999999999999999984
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.96 E-value=1.1e-28 Score=229.74 Aligned_cols=294 Identities=12% Similarity=0.107 Sum_probs=173.4
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCC--CCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTE--NSD 81 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~ 81 (387)
.+|||+|++.++.||++|+++|+++|++ +||+|++++++.+.+.+++ .++.+..++.+.....+..... ...
T Consensus 14 ~~MrIl~~~~~~~gh~~~~~~La~~L~~-~GheV~v~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (398)
T 4fzr_A 14 SHMRILVIAGCSEGFVMPLVPLSWALRA-AGHEVLVAASENMGPTVTG-----AGLPFAPTCPSLDMPEVLSWDREGNRT 87 (398)
T ss_dssp -CCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEEEGGGHHHHHH-----TTCCEEEEESSCCHHHHHSBCTTSCBC
T ss_pred CceEEEEEcCCCcchHHHHHHHHHHHHH-CCCEEEEEcCHHHHHHHHh-----CCCeeEecCCccchHhhhhhhccCccc
Confidence 3678999999999999999999999999 9999999999999999998 6778887763211000000000 000
Q ss_pred CCCCCc---hhH----HHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHHHHH
Q 040467 82 SLPFHL---FPN----FFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFGFAC 154 (387)
Q Consensus 82 ~~~~~~---~~~----~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~ 154 (387)
..+... ... +......+...+.++++++ +||+||+|....++..+|+.+|||++.+..........
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~ 160 (398)
T 4fzr_A 88 TMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW-------KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI 160 (398)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh
Confidence 000000 011 1111234445666777777 99999999988889999999999999875432100000
Q ss_pred HHHhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHh-hhhccCcEEEEechhhhcHHHHHHHH
Q 040467 155 FYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVL-PQWMNADGILFNTVEELDKIGLMYFS 233 (387)
Q Consensus 155 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~le~~~~~~~~ 233 (387)
. .... ..+.....+.. ......+..+......+..+ .
T Consensus 161 ~--------------------------------~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 198 (398)
T 4fzr_A 161 K--------------------------------SAGV-----GELAPELAELGLTDFPDPLLSIDVCPPSMEAQ-----P 198 (398)
T ss_dssp H--------------------------------HHHH-----HHTHHHHHTTTCSSCCCCSEEEECSCGGGC--------
T ss_pred h--------------------------------HHHH-----HHHHHHHHHcCCCCCCCCCeEEEeCChhhCCC-----C
Confidence 0 0000 00000010000 00111233444343344322 0
Q ss_pred hhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCC--------CHHHHHHHHHHHHhC
Q 040467 234 RKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTI--------AASQMMQLAMALEAC 305 (387)
Q Consensus 234 ~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~--------~~~~~~~~~~a~~~~ 305 (387)
......+.++++. ..+.++.+|+...+++++||+++||+... ..+.+..+++++++.
T Consensus 199 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~ 263 (398)
T 4fzr_A 199 KPGTTKMRYVPYN---------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL 263 (398)
T ss_dssp -CCCEECCCCCCC---------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGG
T ss_pred CCCCCCeeeeCCC---------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC
Confidence 0000011111110 02234556766555578999999999643 335688899999999
Q ss_pred CCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcc
Q 040467 306 GKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPI 385 (387)
Q Consensus 306 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~ 385 (387)
+.+++|+.++.. .+.+. ..++|+.+.+|+|+.++|++++ +||||||.||+.||+++|||+
T Consensus 264 ~~~~v~~~~~~~--------------~~~l~----~~~~~v~~~~~~~~~~ll~~ad--~~v~~gG~~t~~Ea~~~G~P~ 323 (398)
T 4fzr_A 264 GFEVVVAVSDKL--------------AQTLQ----PLPEGVLAAGQFPLSAIMPACD--VVVHHGGHGTTLTCLSEGVPQ 323 (398)
T ss_dssp TCEEEECCCC--------------------------CCTTEEEESCCCHHHHGGGCS--EEEECCCHHHHHHHHHTTCCE
T ss_pred CCEEEEEeCCcc--------------hhhhc----cCCCcEEEeCcCCHHHHHhhCC--EEEecCCHHHHHHHHHhCCCE
Confidence 999999887652 01111 1177999999999999999955 599999999999999999999
Q ss_pred cC
Q 040467 386 IG 387 (387)
Q Consensus 386 l~ 387 (387)
|+
T Consensus 324 v~ 325 (398)
T 4fzr_A 324 VS 325 (398)
T ss_dssp EE
T ss_pred Ee
Confidence 84
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.95 E-value=4.5e-27 Score=218.33 Aligned_cols=292 Identities=13% Similarity=0.107 Sum_probs=176.8
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEec-cCCCCCCCC-----CCCCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREI-PFDGIAHDL-----PPCTE 78 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~-----~~~~~ 78 (387)
+|||+|++.++.||++|++.|+++|++ +||+|++++++.+.+.+.+ .++.+..+ +.+...+.. +....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQA-SGHEVLIAAPPELQATAHG-----AGLTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHH-TTCEEEEEECHHHHHHHHH-----BTCEEEEC--------------CCSCCG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHH-CCCEEEEecChhhHHHHHh-----CCCceeeecCCccchhhhhhhccccccc
Confidence 468999999999999999999999999 9999999999888888888 67788877 322100000 00000
Q ss_pred CCCCCCCCchhH-HHHHHhhh-------hHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHH
Q 040467 79 NSDSLPFHLFPN-FFESTLSF-------KPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSF 150 (387)
Q Consensus 79 ~~~~~~~~~~~~-~~~~~~~~-------~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~ 150 (387)
............ +......+ ...+.++++++ +||+||+|...+.+..+|+++|||++.+......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW-------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc-------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 000000001111 11112233 55667777777 9999999988888889999999999987532210
Q ss_pred HHHHHHHhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHh-hhhccCcEEEEechhhhcHHHH
Q 040467 151 GFACFYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVL-PQWMNADGILFNTVEELDKIGL 229 (387)
Q Consensus 151 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~le~~~~ 229 (387)
. . ........ ..+.....+.. ......+..+.....+++..
T Consensus 148 ~-------------------------~------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 189 (391)
T 3tsa_A 148 T-------------------------A------GPFSDRAH-----ELLDPVCRHHGLTGLPTPELILDPCPPSLQAS-- 189 (391)
T ss_dssp T-------------------------T------THHHHHHH-----HHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT--
T ss_pred c-------------------------c------ccccchHH-----HHHHHHHHHcCCCCCCCCceEEEecChhhcCC--
Confidence 0 0 00000000 00111111110 00111234444444443321
Q ss_pred HHHHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcC--CC-HHHHHHHHHHHHhC-
Q 040467 230 MYFSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNT--IA-ASQMMQLAMALEAC- 305 (387)
Q Consensus 230 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~--~~-~~~~~~~~~a~~~~- 305 (387)
.......+.++ | . ..+....+|+...+++++||+++||... .. .+.+..++++ ++.
T Consensus 190 ---~~~~~~~~~~~-p---~------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p 249 (391)
T 3tsa_A 190 ---DAPQGAPVQYV-P---Y------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELP 249 (391)
T ss_dssp ---TSCCCEECCCC-C---C------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTST
T ss_pred ---CCCccCCeeee-c---C------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCC
Confidence 00011111122 1 0 0123445677765567899999999853 33 6778888888 877
Q ss_pred CCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcc
Q 040467 306 GKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPI 385 (387)
Q Consensus 306 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~ 385 (387)
+.+++|..++.. . +.+. ..++|+.+.+|+|+.++|++++ +||||||.||+.||+++|+|+
T Consensus 250 ~~~~v~~~~~~~-------~---~~l~--------~~~~~v~~~~~~~~~~ll~~ad--~~v~~~G~~t~~Ea~~~G~P~ 309 (391)
T 3tsa_A 250 GVEAVIAVPPEH-------R---ALLT--------DLPDNARIAESVPLNLFLRTCE--LVICAGGSGTAFTATRLGIPQ 309 (391)
T ss_dssp TEEEEEECCGGG-------G---GGCT--------TCCTTEEECCSCCGGGTGGGCS--EEEECCCHHHHHHHHHTTCCE
T ss_pred CeEEEEEECCcc-------h---hhcc--------cCCCCEEEeccCCHHHHHhhCC--EEEeCCCHHHHHHHHHhCCCE
Confidence 788888876542 0 1121 1167899999999999998755 599999999999999999999
Q ss_pred cC
Q 040467 386 IG 387 (387)
Q Consensus 386 l~ 387 (387)
|+
T Consensus 310 v~ 311 (391)
T 3tsa_A 310 LV 311 (391)
T ss_dssp EE
T ss_pred Ee
Confidence 84
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.93 E-value=2.4e-24 Score=201.35 Aligned_cols=296 Identities=15% Similarity=0.164 Sum_probs=182.0
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCC--------CCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHD--------LPP 75 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------~~~ 75 (387)
.+|||+|++.++.||++|+++||++|++ +||+|++++++...+.+.+ .++.+..++... ..+ ...
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~-~GheV~v~~~~~~~~~~~~-----~g~~~~~~~~~~-~~~~~~~~~~~~~~ 91 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARA-AGHEVTFATGEGFAGTLRK-----LGFEPVATGMPV-FDGFLAALRIRFDT 91 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHH-TTCEEEEEECGGGHHHHHH-----TTCEEEECCCCH-HHHHHHHHHHHHSC
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHH-CCCEEEEEccHHHHHHHHh-----cCCceeecCccc-ccchhhhhhhhhcc
Confidence 4679999999999999999999999999 9999999999888888888 777888876300 000 000
Q ss_pred CCCCCCCC--CCCchhHHHH-H-HhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHH
Q 040467 76 CTENSDSL--PFHLFPNFFE-S-TLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFG 151 (387)
Q Consensus 76 ~~~~~~~~--~~~~~~~~~~-~-~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~ 151 (387)
........ ........+. . ...+...+.+++++. +||+||+|....++..+|+++|||++.+.......
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 92 DSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL-------RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp SCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred cCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc-------CCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 00000000 0001111111 1 123345667777777 99999999878888889999999998864321100
Q ss_pred HHHHHHhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHh------hhhccCcEEEEechhhhc
Q 040467 152 FACFYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVL------PQWMNADGILFNTVEELD 225 (387)
Q Consensus 152 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~le 225 (387)
+. . ...+.. .+.+...+.. .....++.++..+...++
T Consensus 165 ------------------------~~---~-~~~~~~---------~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~ 207 (412)
T 3otg_A 165 ------------------------DD---L-TRSIEE---------EVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQ 207 (412)
T ss_dssp ------------------------SH---H-HHHHHH---------HHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGS
T ss_pred ------------------------hh---h-hHHHHH---------HHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhc
Confidence 00 0 000000 0000000000 001233445554444444
Q ss_pred HHHHHHHHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccc-cCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHh
Q 040467 226 KIGLMYFSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNW-LDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEA 304 (387)
Q Consensus 226 ~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~ 304 (387)
.. ...+...-..+.+... ....+..+| ....+++++||+++||......+.+..+++++++
T Consensus 208 ~~-----~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~ 269 (412)
T 3otg_A 208 EP-----EFRARPRRHELRPVPF-------------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAG 269 (412)
T ss_dssp CH-----HHHTCTTEEECCCCCC-------------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHT
T ss_pred CC-----cccCCCCcceeeccCC-------------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHc
Confidence 22 1122111111111111 012234456 2323346799999999976667889999999999
Q ss_pred CCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCc
Q 040467 305 CGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVP 384 (387)
Q Consensus 305 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP 384 (387)
.+.+++|..+.+. .. +.+.. .++|+.+.+|+|+.++|++++ +||+|||+||+.||+++|+|
T Consensus 270 ~~~~~~~~~g~~~------~~---~~l~~--------~~~~v~~~~~~~~~~~l~~ad--~~v~~~g~~t~~Ea~a~G~P 330 (412)
T 3otg_A 270 LDADVLVASGPSL------DV---SGLGE--------VPANVRLESWVPQAALLPHVD--LVVHHGGSGTTLGALGAGVP 330 (412)
T ss_dssp SSSEEEEECCSSC------CC---TTCCC--------CCTTEEEESCCCHHHHGGGCS--EEEESCCHHHHHHHHHHTCC
T ss_pred CCCEEEEEECCCC------Ch---hhhcc--------CCCcEEEeCCCCHHHHHhcCc--EEEECCchHHHHHHHHhCCC
Confidence 9999999887652 00 11111 167899999999999999966 49999999999999999999
Q ss_pred ccC
Q 040467 385 IIG 387 (387)
Q Consensus 385 ~l~ 387 (387)
+|+
T Consensus 331 ~v~ 333 (412)
T 3otg_A 331 QLS 333 (412)
T ss_dssp EEE
T ss_pred EEe
Confidence 984
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.85 E-value=1e-19 Score=166.71 Aligned_cols=265 Identities=15% Similarity=0.098 Sum_probs=154.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc--hhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN--LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSL 83 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 83 (387)
.||+|...|+-||++|.++||++|++ +||+|+|++++.. .+.+.+ .++.+..++.. ++....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~-~g~~V~~vg~~~g~e~~~v~~-----~g~~~~~i~~~----~~~~~~------ 66 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQA-RGYAVHWLGTPRGIENDLVPK-----AGLPLHLIQVS----GLRGKG------ 66 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH-TTCEEEEEECSSSTHHHHTGG-----GTCCEEECC------------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHh-CCCEEEEEECCchHhhchhhh-----cCCcEEEEECC----CcCCCC------
Confidence 47999999888999999999999999 9999999987653 344566 67788887642 222110
Q ss_pred CCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch--hhHHHHHHhCCceEEEcchhHHHHHHHHHhhhc
Q 040467 84 PFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQEYGIFNALFVGGGSFGFACFYSLWLN 161 (387)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~--~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 161 (387)
....+...+...... .....++++. +||+||.+.... .+..+|+.+|||++..-..
T Consensus 67 ~~~~~~~~~~~~~~~-~~~~~~l~~~-------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n-------------- 124 (365)
T 3s2u_A 67 LKSLVKAPLELLKSL-FQALRVIRQL-------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN-------------- 124 (365)
T ss_dssp ------CHHHHHHHH-HHHHHHHHHH-------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS--------------
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHhc-------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc--------------
Confidence 000111111222222 2245577777 999999986554 3456788899999864210
Q ss_pred CCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHHHhhcCCCeE
Q 040467 162 LPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYFSRKLGRPVW 241 (387)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~ 241 (387)
..+++. ++.+ .+.++.+.. ++.+.. ....+.+
T Consensus 125 ---------~~~G~~-----------------------nr~l------~~~a~~v~~-~~~~~~---------~~~~k~~ 156 (365)
T 3s2u_A 125 ---------AVAGTA-----------------------NRSL------APIARRVCE-AFPDTF---------PASDKRL 156 (365)
T ss_dssp ---------SSCCHH-----------------------HHHH------GGGCSEEEE-SSTTSS---------CC---CE
T ss_pred ---------hhhhhH-----------------------HHhh------ccccceeee-cccccc---------cCcCcEE
Confidence 011110 0000 111233332 222111 1124566
Q ss_pred EeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhC----CCcEEEEEcCCC
Q 040467 242 PVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEAC----GKNFIWVVKPPL 317 (387)
Q Consensus 242 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~----~~~~l~~~~~~~ 317 (387)
.+|........ .+......++ +++++|++..||..... ..+.+.+++.+. +..+++.+|...
T Consensus 157 ~~g~pvr~~~~----------~~~~~~~~~~--~~~~~ilv~gGs~g~~~--~~~~~~~al~~l~~~~~~~vi~~~G~~~ 222 (365)
T 3s2u_A 157 TTGNPVRGELF----------LDAHARAPLT--GRRVNLLVLGGSLGAEP--LNKLLPEALAQVPLEIRPAIRHQAGRQH 222 (365)
T ss_dssp ECCCCCCGGGC----------CCTTSSCCCT--TSCCEEEECCTTTTCSH--HHHHHHHHHHTSCTTTCCEEEEECCTTT
T ss_pred EECCCCchhhc----------cchhhhcccC--CCCcEEEEECCcCCccc--cchhhHHHHHhcccccceEEEEecCccc
Confidence 77765543210 0111111222 23568999999886432 233455666553 345666665442
Q ss_pred CCCCCcchhcccCCchhHHHHhccCCCcEEeccccCH-HHhhCccCcceeeeccChhHHHHHHHcCCccc
Q 040467 318 GFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQ-VEILSHKSISAFLSHCGWNSVLEALSHRVPII 386 (387)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq-~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l 386 (387)
.+.+.+..+..+.++.+.+|+++ .++|..+++ +|||+|.+|+.|++++|+|+|
T Consensus 223 --------------~~~~~~~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~I 276 (365)
T 3s2u_A 223 --------------AEITAERYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAF 276 (365)
T ss_dssp --------------HHHHHHHHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEE
T ss_pred --------------cccccceecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeE
Confidence 13333444433678888899987 569999775 999999999999999999987
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.75 E-value=3.2e-18 Score=139.39 Aligned_cols=106 Identities=25% Similarity=0.489 Sum_probs=89.3
Q ss_pred CCChhhhccccCCCCCCeeEEEecCCCc-CCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHh
Q 040467 261 GISTELCKNWLDTKPCNSVIYVSFGSQN-TIAASQMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERI 339 (387)
Q Consensus 261 ~~~~~~~~~~l~~~~~~~~v~vs~GS~~-~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (387)
+++++++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|+.++.. ++.+
T Consensus 5 ~~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------------~~~~---- 66 (170)
T 2o6l_A 5 KPLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------------PDTL---- 66 (170)
T ss_dssp CCCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------------CTTC----
T ss_pred CCCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------------cccC----
Confidence 4578899999987666789999999996 35677888999999998999999987552 1111
Q ss_pred ccCCCcEEeccccCHHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 340 KDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 340 ~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
+.|+.+.+|+||.++|.|+++++||||||+||+.||+++|+|+|+
T Consensus 67 ---~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~ 111 (170)
T 2o6l_A 67 ---GLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVG 111 (170)
T ss_dssp ---CTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred ---CCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEe
Confidence 568999999999999977778889999999999999999999984
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.64 E-value=1.8e-14 Score=131.95 Aligned_cols=265 Identities=14% Similarity=0.089 Sum_probs=152.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc--hhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN--LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSL 83 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 83 (387)
+||++++.+..||..+++.||++|++ +||+|++++.... ...+.+ .++++..++.. .+... .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~-----~g~~~~~~~~~----~~~~~-----~- 70 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMA-QGWQVRWLGTADRMEADLVPK-----HGIEIDFIRIS----GLRGK-----G- 70 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHT-TTCEEEEEECTTSTHHHHGGG-----GTCEEEECCCC----CCTTC-----C-
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHH-cCCEEEEEecCCcchhhhccc-----cCCceEEecCC----ccCcC-----c-
Confidence 79999998888999999999999999 9999999997653 233444 56777776532 11110 0
Q ss_pred CCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCc--hhhHHHHHHhCCceEEEcchhHHHHHHHHHhhhc
Q 040467 84 PFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF--AWSAEIAQEYGIFNALFVGGGSFGFACFYSLWLN 161 (387)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~--~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~ 161 (387)
....+....... .....+..++++. +||+|+++... ..+..+++..|+|++......
T Consensus 71 ~~~~~~~~~~~~-~~~~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~------------- 129 (364)
T 1f0k_A 71 IKALIAAPLRIF-NAWRQARAIMKAY-------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG------------- 129 (364)
T ss_dssp HHHHHTCHHHHH-HHHHHHHHHHHHH-------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS-------------
T ss_pred cHHHHHHHHHHH-HHHHHHHHHHHhc-------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC-------------
Confidence 000000011111 1233455666776 89999998643 245567788899998642210
Q ss_pred CCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHHHhhcCCCeE
Q 040467 162 LPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYFSRKLGRPVW 241 (387)
Q Consensus 162 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~ 241 (387)
+++ . ..+ ...+.++.++..+... ++ ++.
T Consensus 130 ----------~~~--------------~---------~~~------~~~~~~d~v~~~~~~~------------~~-~~~ 157 (364)
T 1f0k_A 130 ----------IAG--------------L---------TNK------WLAKIATKVMQAFPGA------------FP-NAE 157 (364)
T ss_dssp ----------SCC--------------H---------HHH------HHTTTCSEEEESSTTS------------SS-SCE
T ss_pred ----------CCc--------------H---------HHH------HHHHhCCEEEecChhh------------cC-Cce
Confidence 000 0 000 0112344555433211 22 455
Q ss_pred EeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhC--CCcEEEEEcCCCCC
Q 040467 242 PVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEAC--GKNFIWVVKPPLGF 319 (387)
Q Consensus 242 ~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~--~~~~l~~~~~~~~~ 319 (387)
.+|........ . .+ ...+.+...+++++|++..|+... ......+++++++. +.++++.+|.+.
T Consensus 158 ~i~n~v~~~~~--------~-~~-~~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~-- 223 (364)
T 1f0k_A 158 VVGNPVRTDVL--------A-LP-LPQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS-- 223 (364)
T ss_dssp ECCCCCCHHHH--------T-SC-CHHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--
T ss_pred EeCCccchhhc--------c-cc-hhhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--
Confidence 66653322100 0 00 011112222235678888888753 33344455666554 456666666542
Q ss_pred CCCcchhcccCCchhHHHHhccC-CCcEEeccccC-HHHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 320 DMNSEFRANEWLPEGFEERIKDS-GQGLVVQKWAP-QVEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p-q~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
.+.+.+..... -+++.+.+|++ -..++..+++ +|+++|.+++.||+++|+|+|+
T Consensus 224 ------------~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~ 279 (364)
T 1f0k_A 224 ------------QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALF 279 (364)
T ss_dssp ------------HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEE
T ss_pred ------------HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEE
Confidence 12233222211 25789999994 4779988665 9999999999999999999984
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.18 E-value=3.1e-09 Score=92.45 Aligned_cols=91 Identities=10% Similarity=0.062 Sum_probs=64.2
Q ss_pred CeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHH-
Q 040467 277 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV- 355 (387)
Q Consensus 277 ~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~- 355 (387)
.+.|+|++|..... .....+++++.+.. ++.++++... ...+.+...... ..|+.+..|+++-
T Consensus 157 ~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~------------~~~~~l~~~~~~-~~~v~v~~~~~~m~ 220 (282)
T 3hbm_A 157 KYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSN------------PNLKKLQKFAKL-HNNIRLFIDHENIA 220 (282)
T ss_dssp CEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTC------------TTHHHHHHHHHT-CSSEEEEESCSCHH
T ss_pred CCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCc------------hHHHHHHHHHhh-CCCEEEEeCHHHHH
Confidence 46899999965432 35566788887644 6777776653 122333333221 3489999999866
Q ss_pred HhhCccCcceeeeccChhHHHHHHHcCCccc
Q 040467 356 EILSHKSISAFLSHCGWNSVLEALSHRVPII 386 (387)
Q Consensus 356 ~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l 386 (387)
+++..+++ +|++|| +|+.|+++.|+|+|
T Consensus 221 ~~m~~aDl--vI~~gG-~T~~E~~~~g~P~i 248 (282)
T 3hbm_A 221 KLMNESNK--LIISAS-SLVNEALLLKANFK 248 (282)
T ss_dssp HHHHTEEE--EEEESS-HHHHHHHHTTCCEE
T ss_pred HHHHHCCE--EEECCc-HHHHHHHHcCCCEE
Confidence 58888665 999999 89999999999987
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.15 E-value=1.4e-10 Score=96.80 Aligned_cols=99 Identities=15% Similarity=0.202 Sum_probs=67.2
Q ss_pred CCCeeEEEecCCCcCCCHHHHHHH-----HHHHHhCC-CcEEEEEcCCCCCCCCcchhcccCCchhHHHHh---------
Q 040467 275 PCNSVIYVSFGSQNTIAASQMMQL-----AMALEACG-KNFIWVVKPPLGFDMNSEFRANEWLPEGFEERI--------- 339 (387)
Q Consensus 275 ~~~~~v~vs~GS~~~~~~~~~~~~-----~~a~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 339 (387)
+++++|||+.||... -.+.+..+ ++++.+.+ .++++.+|... ......+..+.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~-----------~~~~~~~~~~~~~~~~~~l~ 93 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY-----------SSEFEHLVQERGGQRESQKI 93 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS-----------CCCCCSHHHHHTCEECSCCC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc-----------hhhHHHHHHhhhcccccccc
Confidence 346799999999842 24444443 48888877 78999998663 10111111111
Q ss_pred ----------------ccCCCcEEeccccCHH-HhhC-ccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 340 ----------------KDSGQGLVVQKWAPQV-EILS-HKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 340 ----------------~~~~~~v~~~~~~pq~-~lL~-~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
....-++.+.+|+++- ++|+ .+++ +|||||+||+.|++++|+|+|.
T Consensus 94 p~~~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~Iv 157 (224)
T 2jzc_A 94 PIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIV 157 (224)
T ss_dssp SSCTTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCE
T ss_pred ccccccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEE
Confidence 0001256677888764 7999 9665 9999999999999999999973
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.92 E-value=6.4e-07 Score=82.22 Aligned_cols=280 Identities=11% Similarity=0.009 Sum_probs=145.5
Q ss_pred CCCccEEEEEcC--C--CcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhh--hhhcCCCCCCeeEEeccCCCCCCCCCC
Q 040467 2 AQRKENIVMFPL--M--AQGHTIPFLALALHLENTNRYTITFVNTPSNLKK--LKSSLPQNSSIHLREIPFDGIAHDLPP 75 (387)
Q Consensus 2 ~~~~~~il~~~~--~--~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~ 75 (387)
||+++||++++. + ..|.-.-+..+++.| +||+|++++....... .... . .++.+..++.. ..
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L---~g~~v~v~~~~~~~~~~~~~~~-~--~~~~~~~~~~~---~~--- 68 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQ---DPESIVVFASTQNAEEAHAYDK-T--LDYEVIRWPRS---VM--- 68 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTS---CGGGEEEEEECSSHHHHHHHHT-T--CSSEEEEESSS---SC---
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHh---cCCeEEEEECCCCccchhhhcc-c--cceEEEEcccc---cc---
Confidence 566788999985 3 457778888888888 5899999986655431 1111 1 56777776631 00
Q ss_pred CCCCCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch--hhHHHHHHhCCceEE-EcchhHHHH
Q 040467 76 CTENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQEYGIFNAL-FVGGGSFGF 152 (387)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~--~~~~~a~~lgiP~v~-~~~~~~~~~ 152 (387)
.. . ......+..++++. +||+|++..... ....+++++++|.+. ........
T Consensus 69 -------~~--~--------~~~~~~l~~~~~~~-------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~- 123 (394)
T 3okp_A 69 -------LP--T--------PTTAHAMAEIIRER-------EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG- 123 (394)
T ss_dssp -------CS--C--------HHHHHHHHHHHHHT-------TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH-
T ss_pred -------cc--c--------hhhHHHHHHHHHhc-------CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh-
Confidence 00 0 02233456677777 899999765444 445667889998544 32211110
Q ss_pred HHHHHhhhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHH
Q 040467 153 ACFYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYF 232 (387)
Q Consensus 153 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~ 232 (387)
+.. ...... ......+.++.++..+-...+ .+
T Consensus 124 ----------------------------~~~-------------~~~~~~--~~~~~~~~~d~ii~~s~~~~~-----~~ 155 (394)
T 3okp_A 124 ----------------------------WSM-------------LPGSRQ--SLRKIGTEVDVLTYISQYTLR-----RF 155 (394)
T ss_dssp ----------------------------HTT-------------SHHHHH--HHHHHHHHCSEEEESCHHHHH-----HH
T ss_pred ----------------------------hhh-------------cchhhH--HHHHHHHhCCEEEEcCHHHHH-----HH
Confidence 000 000000 112234567777776643322 12
Q ss_pred Hhhc--CCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcC-CCHHHHHHHHHHHHh--CCC
Q 040467 233 SRKL--GRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNT-IAASQMMQLAMALEA--CGK 307 (387)
Q Consensus 233 ~~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~a~~~--~~~ 307 (387)
.+.+ ..++..+........... ........+.+-+.-. ++..+++..|+... ...+.+...+..+.+ .+.
T Consensus 156 ~~~~~~~~~~~vi~ngv~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~ 230 (394)
T 3okp_A 156 KSAFGSHPTFEHLPSGVDVKRFTP----ATPEDKSATRKKLGFT-DTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDA 230 (394)
T ss_dssp HHHHCSSSEEEECCCCBCTTTSCC----CCHHHHHHHHHHTTCC-TTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTC
T ss_pred HHhcCCCCCeEEecCCcCHHHcCC----CCchhhHHHHHhcCCC-cCceEEEEEeccccccCHHHHHHHHHHHHhhCCCe
Confidence 2222 245666655443321100 0000112222222222 23366777787642 233333333333333 245
Q ss_pred cEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHH---hhCccCcceeee-----------ccChh
Q 040467 308 NFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVE---ILSHKSISAFLS-----------HCGWN 373 (387)
Q Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~---lL~~~~~~~~v~-----------HGG~~ 373 (387)
++++ +|.+. ....+........+++.+.+|+|+.+ ++..+++ +|. -|..+
T Consensus 231 ~l~i-~G~g~-------------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~ 294 (394)
T 3okp_A 231 QLLI-VGSGR-------------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGI 294 (394)
T ss_dssp EEEE-ECCCT-------------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCH
T ss_pred EEEE-EcCch-------------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCc
Confidence 5554 44332 11222222221146899999998666 5667665 665 56677
Q ss_pred HHHHHHHcCCcccC
Q 040467 374 SVLEALSHRVPIIG 387 (387)
Q Consensus 374 s~~eal~~GvP~l~ 387 (387)
++.||+++|+|+|+
T Consensus 295 ~~~Ea~a~G~PvI~ 308 (394)
T 3okp_A 295 VYLEAQACGVPVIA 308 (394)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 99999999999984
No 26
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.82 E-value=5.1e-07 Score=84.14 Aligned_cols=317 Identities=11% Similarity=0.016 Sum_probs=148.7
Q ss_pred CccEEEEEcCC-----CcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhh--------------------hhcCCCCCC
Q 040467 4 RKENIVMFPLM-----AQGHTIPFLALALHLENTNRYTITFVNTPSNLKKL--------------------KSSLPQNSS 58 (387)
Q Consensus 4 ~~~~il~~~~~-----~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~--------------------~~~~~~~~~ 58 (387)
++|||++++.. .-|--.-+..||++|++ +||+|+++++......- .. .+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g 74 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALAS-LGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEER-----GN 74 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHH-TTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEE-----TT
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHH-CCCeEEEEecCCCCchhhhhccccccCcccceeeeeccC-----CC
Confidence 35789999843 34666678999999999 99999999943221110 11 56
Q ss_pred eeEEeccCCCCCCCCCCCCCCCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch--hhHHHHHH
Q 040467 59 IHLREIPFDGIAHDLPPCTENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQE 136 (387)
Q Consensus 59 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~--~~~~~a~~ 136 (387)
+.+..++.. .+.. ..........+..........+..+++.+... .. +||+|.+..... .+..+++.
T Consensus 75 v~v~~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~Dii~~~~~~~~~~~~~~~~~ 143 (439)
T 3fro_A 75 LRIYRIGGG----LLDS-----EDVYGPGWDGLIRKAVTFGRASVLLLNDLLRE-EP-LPDVVHFHDWHTVFAGALIKKY 143 (439)
T ss_dssp EEEEEEESG----GGGC-----SSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTT-SC-CCSEEEEESGGGHHHHHHHHHH
T ss_pred ceEEEecch----hccc-----cccccCCcchhhhhhHHHHHHHHHHHHHHhcc-CC-CCeEEEecchhhhhhHHHHhhc
Confidence 666666520 0000 00000011121222222233333444433110 11 799999875444 24456677
Q ss_pred hCCceEEEcchhHHHHHHHHHhhhcCCCCCCCcccCCCCCCCcccCccccc-hhhhhcCCCChhHHHHHHHhhhhccCcE
Q 040467 137 YGIFNALFVGGGSFGFACFYSLWLNLPHRDSDEFLLPDFPEASRIHVTQMT-KFLRLADGSDSLSVFFQKVLPQWMNADG 215 (387)
Q Consensus 137 lgiP~v~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (387)
.++|+|........ ..++. .... ..+......... .......+.++.
T Consensus 144 ~~~~~v~~~h~~~~----------------------~~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~ad~ 191 (439)
T 3fro_A 144 FKIPAVFTIHRLNK----------------------SKLPA------FYFHEAGLSELAPYPDI----DPEHTGGYIADI 191 (439)
T ss_dssp HCCCEEEEESCCCC----------------------CCEEH------HHHHHTTCGGGCCSSEE----CHHHHHHHHCSE
T ss_pred cCCCEEEEeccccc----------------------ccCch------HHhCcccccccccccee----eHhhhhhhhccE
Confidence 89999876432110 00000 0000 000000000000 011223446777
Q ss_pred EEEechhhhcHHHHHHHHhhcCCCeEEeccccCCCCCCCCCCC-CCCCChhhhccccCCCCCCeeEEEecCCCc-C-CCH
Q 040467 216 ILFNTVEELDKIGLMYFSRKLGRPVWPVGSLLLSTGSRAGAGK-EYGISTELCKNWLDTKPCNSVIYVSFGSQN-T-IAA 292 (387)
Q Consensus 216 ~~~~~~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~-~-~~~ 292 (387)
++..+-...+. ....+ .....++..+..-............ ........+.+-+.-.+ + .+++..|+.. . ...
T Consensus 192 ii~~S~~~~~~-~~~~~-~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~i~~~G~~~~~~Kg~ 267 (439)
T 3fro_A 192 VTTVSRGYLID-EWGFF-RNFEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGMDE-G-VTFMFIGRFDRGQKGV 267 (439)
T ss_dssp EEESCHHHHHH-THHHH-GGGTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTCCS-C-EEEEEECCSSCTTBCH
T ss_pred EEecCHHHHHH-Hhhhh-hhcCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCCCC-C-cEEEEEcccccccccH
Confidence 77777543332 11111 1123556655554432211000000 00001122222222222 3 7778888876 3 345
Q ss_pred HHHHHHHHHHHh----CCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHH---hhCccCcce
Q 040467 293 SQMMQLAMALEA----CGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVE---ILSHKSISA 365 (387)
Q Consensus 293 ~~~~~~~~a~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~---lL~~~~~~~ 365 (387)
+.+-..+..+.+ .+.+++ .+|.+. ....+.+.......++++.+.+|+++.+ ++..+++
T Consensus 268 ~~li~a~~~l~~~~~~~~~~l~-i~G~g~-----------~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv-- 333 (439)
T 3fro_A 268 DVLLKAIEILSSKKEFQEMRFI-IIGKGD-----------PELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF-- 333 (439)
T ss_dssp HHHHHHHHHHHTSGGGGGEEEE-EECCCC-----------HHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--
T ss_pred HHHHHHHHHHHhcccCCCeEEE-EEcCCC-----------hhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--
Confidence 555555555544 234433 344332 0011223332322246677889999865 5777665
Q ss_pred eee----ccChhHHHHHHHcCCcccC
Q 040467 366 FLS----HCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 366 ~v~----HGG~~s~~eal~~GvP~l~ 387 (387)
+|. -|--+++.||+++|+|+|+
T Consensus 334 ~v~ps~~e~~~~~~~EAma~G~Pvi~ 359 (439)
T 3fro_A 334 VIIPSYFEPFGLVALEAMCLGAIPIA 359 (439)
T ss_dssp EEECBSCCSSCHHHHHHHHTTCEEEE
T ss_pred EEeCCCCCCccHHHHHHHHCCCCeEE
Confidence 663 2445799999999999984
No 27
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.73 E-value=3e-06 Score=79.06 Aligned_cols=120 Identities=9% Similarity=0.073 Sum_probs=66.4
Q ss_pred CccEEEEEcC---C--------CcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhh--hhhcCCCCCCeeEEeccCCCCC
Q 040467 4 RKENIVMFPL---M--------AQGHTIPFLALALHLENTNRYTITFVNTPSNLKK--LKSSLPQNSSIHLREIPFDGIA 70 (387)
Q Consensus 4 ~~~~il~~~~---~--------~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~ 70 (387)
+.|||++++. | .-|+-..+..++++|.+ +||+|++++....... .... . .++.+..++..
T Consensus 19 ~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~~-~--~~v~v~~~~~~--- 91 (438)
T 3c48_A 19 SHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAK-QGIEVDIYTRATRPSQGEIVRV-A--ENLRVINIAAG--- 91 (438)
T ss_dssp CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHH-TTCEEEEEEECCCGGGCSEEEE-E--TTEEEEEECCS---
T ss_pred chheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHh-cCCEEEEEecCCCCCCcccccc-c--CCeEEEEecCC---
Confidence 3457999995 2 35888999999999999 9999999986543211 1111 1 56777766532
Q ss_pred CCCCCCCCCCCCCCCCchhHHHHHHhhhhHHHHHH-HHhhhhccCCCCCeEEEeCCCch--hhHHHHHHhCCceEEEcch
Q 040467 71 HDLPPCTENSDSLPFHLFPNFFESTLSFKPHFRKL-INGLIDEQNGHKPVCIIADMFFA--WSAEIAQEYGIFNALFVGG 147 (387)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-l~~~~~~~~~~~pD~vV~D~~~~--~~~~~a~~lgiP~v~~~~~ 147 (387)
.... .....+.... ......+... ++.. . +||+|++..... .+..+++..++|+|.....
T Consensus 92 -~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~-----~-~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~ 154 (438)
T 3c48_A 92 -PYEG-------LSKEELPTQL---AAFTGGMLSFTRREK-----V-TYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHT 154 (438)
T ss_dssp -CSSS-------CCGGGGGGGH---HHHHHHHHHHHHHHT-----C-CCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSS
T ss_pred -Cccc-------cchhHHHHHH---HHHHHHHHHHHHhcc-----C-CCCEEEeCCccHHHHHHHHHHHcCCCEEEEecC
Confidence 0000 0000111111 1111112222 3333 0 499999875332 3345677789999886543
No 28
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.72 E-value=7.9e-07 Score=81.26 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=54.0
Q ss_pred CeeEEEecCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccc
Q 040467 277 NSVIYVSFGSQNTIAASQMMQLAMALEA-----CGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKW 351 (387)
Q Consensus 277 ~~~v~vs~GS~~~~~~~~~~~~~~a~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 351 (387)
++.|+++.|...... .+..+++|+++ .+.++++..+.+. .+-+.+.+... ..+++.+.++
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~------------~~~~~l~~~~~-~~~~v~~~g~ 262 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP------------VVREAVFPVLK-GVRNFVLLDP 262 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH------------HHHHHHHHHHT-TCTTEEEECC
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH------------HHHHHHHHHhc-cCCCEEEECC
Confidence 457777777653322 34445566543 2455555444321 01122222222 1358888866
Q ss_pred cCH---HHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 352 APQ---VEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 352 ~pq---~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
+++ ..++..+++ ||+.+| |.+.||+++|+|+|+
T Consensus 263 ~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~ 298 (376)
T 1v4v_A 263 LEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVV 298 (376)
T ss_dssp CCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEe
Confidence 665 478888665 999884 446699999999983
No 29
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.72 E-value=1.6e-07 Score=84.76 Aligned_cols=90 Identities=21% Similarity=0.323 Sum_probs=55.3
Q ss_pred EEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHH---H
Q 040467 280 IYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQV---E 356 (387)
Q Consensus 280 v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~---~ 356 (387)
+++..|+.. .......+++++++.+.++++ +|.+. ..+.+.+..+..++++.+.+|+++. .
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~-------------~~~~l~~~~~~~~~~v~~~g~~~~~~l~~ 227 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAW-------------EPEYFDEITRRYGSTVEPIGEVGGERRLD 227 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCC-------------CHHHHHHHHHHHTTTEEECCCCCHHHHHH
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCcc-------------cHHHHHHHHHHhCCCEEEeccCCHHHHHH
Confidence 445567764 223355667777777777665 44332 1122222111113789999999976 6
Q ss_pred hhCccCcceeee--------------ccChhHHHHHHHcCCcccC
Q 040467 357 ILSHKSISAFLS--------------HCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 357 lL~~~~~~~~v~--------------HGG~~s~~eal~~GvP~l~ 387 (387)
++..+++ +|. -|-.+++.||+++|+|+|+
T Consensus 228 ~~~~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~ 270 (342)
T 2iuy_A 228 LLASAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVG 270 (342)
T ss_dssp HHHHCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEE
T ss_pred HHHhCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEE
Confidence 7878776 552 2335689999999999985
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.68 E-value=5.5e-07 Score=85.70 Aligned_cols=126 Identities=9% Similarity=0.062 Sum_probs=70.0
Q ss_pred CCCccEEEEEcCC---------------CcccHHHHHHHHHHHHhCCCcEEEEEeCCcchh---h----hhhcCCCCCCe
Q 040467 2 AQRKENIVMFPLM---------------AQGHTIPFLALALHLENTNRYTITFVNTPSNLK---K----LKSSLPQNSSI 59 (387)
Q Consensus 2 ~~~~~~il~~~~~---------------~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~---~----~~~~~~~~~~i 59 (387)
|.++|||++++.. ..|.-..+..++++|++ +||+|++++...... . ++... ...++
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~~~~~~~~~~~~~~-~~~gv 81 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAE-MGVQVDIITRRIKDENWPEFSGEIDYYQ-ETNKV 81 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHH-TTCEEEEEEECCCBTTBGGGCCSEEECT-TCSSE
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHh-cCCeEEEEeCCCCcccccchhhhHHhcc-CCCCe
Confidence 4445899999862 35778889999999999 999999998543211 1 21110 01577
Q ss_pred eEEeccCCCCCCCCCCCCCCCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch--hhHHHHHHh
Q 040467 60 HLREIPFDGIAHDLPPCTENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQEY 137 (387)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~--~~~~~a~~l 137 (387)
.++.++.. . ..... .......+ ......+..++++.. . +||+|.+..... .+..+++.+
T Consensus 82 ~v~~~~~~----~--~~~~~----~~~~~~~~----~~~~~~l~~~l~~~~----~-~~Divh~~~~~~~~~~~~~~~~~ 142 (499)
T 2r60_A 82 RIVRIPFG----G--DKFLP----KEELWPYL----HEYVNKIINFYREEG----K-FPQVVTTHYGDGGLAGVLLKNIK 142 (499)
T ss_dssp EEEEECCS----C--SSCCC----GGGCGGGH----HHHHHHHHHHHHHHT----C-CCSEEEEEHHHHHHHHHHHHHHH
T ss_pred EEEEecCC----C--cCCcC----HHHHHHHH----HHHHHHHHHHHHhcC----C-CCCEEEEcCCcchHHHHHHHHhc
Confidence 88777642 0 00000 00001111 111223444555420 0 799998865432 233567778
Q ss_pred CCceEEEcchh
Q 040467 138 GIFNALFVGGG 148 (387)
Q Consensus 138 giP~v~~~~~~ 148 (387)
|+|+|......
T Consensus 143 ~~p~v~~~H~~ 153 (499)
T 2r60_A 143 GLPFTFTGHSL 153 (499)
T ss_dssp CCCEEEECSSC
T ss_pred CCcEEEEccCc
Confidence 99998765443
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.66 E-value=2.1e-06 Score=79.14 Aligned_cols=113 Identities=15% Similarity=0.005 Sum_probs=62.5
Q ss_pred CccEEEEEcCC---C-cccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCC
Q 040467 4 RKENIVMFPLM---A-QGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (387)
Q Consensus 4 ~~~~il~~~~~---~-~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 79 (387)
++|||+++... . .|.-.-+..++++|++ +||+|++++.............. .+ .+..++.. . .
T Consensus 19 ~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~~~~~~~~~-~~-~~~~~~~~-------~---~ 85 (406)
T 2gek_A 19 SHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRD-AGHEVSVLAPASPHVKLPDYVVS-GG-KAVPIPYN-------G---S 85 (406)
T ss_dssp --CEEEEECSSCTTSCCHHHHHHHHHHHHHHH-TTCEEEEEESCCTTSCCCTTEEE-CC-CCC-----------------
T ss_pred CcceEEEEeccCCCCCCcHHHHHHHHHHHHHH-CCCeEEEEecCCccccCCccccc-CC-cEEecccc-------C---C
Confidence 35679999852 2 5677889999999999 99999999875443211110000 01 11111110 0 0
Q ss_pred CCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch--hhHHHHHHhCCceEEEc
Q 040467 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQEYGIFNALFV 145 (387)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~--~~~~~a~~lgiP~v~~~ 145 (387)
. ..+ .........+..++++. +||+|++..... .+..++...++|++...
T Consensus 86 ~--------~~~-~~~~~~~~~l~~~l~~~-------~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~ 137 (406)
T 2gek_A 86 V--------ARL-RFGPATHRKVKKWIAEG-------DFDVLHIHEPNAPSLSMLALQAAEGPIVATF 137 (406)
T ss_dssp --------------CCHHHHHHHHHHHHHH-------CCSEEEEECCCSSSHHHHHHHHEESSEEEEE
T ss_pred c--------ccc-cccHHHHHHHHHHHHhc-------CCCEEEECCccchHHHHHHHHhcCCCEEEEE
Confidence 0 000 00011224456667776 899999776554 34456667799998864
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.61 E-value=2.3e-06 Score=78.38 Aligned_cols=94 Identities=15% Similarity=0.150 Sum_probs=55.3
Q ss_pred CeeEEEecCCCcCCCHHHHHHHHHHHHh-----CCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccc
Q 040467 277 NSVIYVSFGSQNTIAASQMMQLAMALEA-----CGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKW 351 (387)
Q Consensus 277 ~~~v~vs~GS~~~~~~~~~~~~~~a~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 351 (387)
++.|+++.|....... .+..+++|+.+ .+.++++..+.+. .+-+.+.+.... .+++.+.++
T Consensus 205 ~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~------------~~~~~l~~~~~~-~~~v~~~g~ 270 (384)
T 1vgv_A 205 KKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP------------NVREPVNRILGH-VKNVILIDP 270 (384)
T ss_dssp SEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH------------HHHHHHHHHHTT-CTTEEEECC
T ss_pred CCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH------------HHHHHHHHHhhc-CCCEEEeCC
Confidence 5578888887754332 34445555543 2455555333210 011122222221 358888777
Q ss_pred cCH---HHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 352 APQ---VEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 352 ~pq---~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
+++ ..++..+++ ||+.+|. .+.||+++|+|+|+
T Consensus 271 ~~~~~~~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~ 306 (384)
T 1vgv_A 271 QEYLPFVWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLV 306 (384)
T ss_dssp CCHHHHHHHHHHCSE--EEESSST-GGGTGGGGTCCEEE
T ss_pred CCHHHHHHHHHhCcE--EEECCcc-hHHHHHHcCCCEEE
Confidence 765 457878665 9988864 48899999999984
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.53 E-value=1.9e-06 Score=79.33 Aligned_cols=115 Identities=12% Similarity=0.077 Sum_probs=63.4
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCC-CcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTN-RYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSD 81 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 81 (387)
|+++||++++ +++....=+-+|.++|.+ + |+++.++.+-...+.... .+ ..+.+... ..+.- ..
T Consensus 23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~-~~~~~~~~~~tG~h~~~~~~------~~--~~~~i~~~-~~l~~--~~-- 87 (396)
T 3dzc_A 23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQ-DNRFVAKVCVTGQHREMLDQ------VL--ELFSITPD-FDLNI--ME-- 87 (396)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHH-CTTEEEEEEECCSSSHHHHH------HH--HHTTCCCS-EECCC--CC--
T ss_pred CCCCeEEEEE-eccHhHHHHHHHHHHHHh-CCCCcEEEEEecccHHHHHH------HH--HhcCCCCc-eeeec--CC--
Confidence 3345676665 677777778889999998 6 799876655444322211 00 11111000 00100 00
Q ss_pred CCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEe--CCCc-hhhHHHHHHhCCceEEE
Q 040467 82 SLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIA--DMFF-AWSAEIAQEYGIFNALF 144 (387)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~--D~~~-~~~~~~a~~lgiP~v~~ 144 (387)
.. ......+......+..++++. +||+|++ |..+ ..+..+|..+|||++.+
T Consensus 88 --~~---~~~~~~~~~~~~~l~~~l~~~-------kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 88 --PG---QTLNGVTSKILLGMQQVLSSE-------QPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp --TT---CCHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred --CC---CCHHHHHHHHHHHHHHHHHhc-------CCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 00 112222344455677788888 9999886 3333 24467788899998765
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.52 E-value=6.3e-06 Score=75.09 Aligned_cols=115 Identities=12% Similarity=0.024 Sum_probs=64.1
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCC-C-cEEEEEeCCcchhhhhhcCCCCCCeeE-EeccCCCCCCCCCCCCC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTN-R-YTITFVNTPSNLKKLKSSLPQNSSIHL-REIPFDGIAHDLPPCTE 78 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~r-G-h~Vt~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~ 78 (387)
|+++|||++++ +..++......++++|++ + | |+|.++++....+...+... ..++.. ..++.. .
T Consensus 5 m~~~mkIl~v~-~~~~~~~~~~~l~~~L~~-~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~- 71 (375)
T 3beo_A 5 MTERLKVMTIF-GTRPEAIKMAPLVLELQK-HPEKIESIVTVTAQHRQMLDQVLS-IFGITPDFDLNIM---------K- 71 (375)
T ss_dssp CSSCEEEEEEE-CSHHHHHHHHHHHHHHTT-CTTTEEEEEEECCSSSHHHHHHHH-HHTCCCSEECCCC---------C-
T ss_pred CCcCceEEEEe-cCcHHHHHHHHHHHHHHh-CCCCCCeEEEEcCCCHHHHHHHHH-HcCCCCccccccC---------C-
Confidence 56678999997 446788888899999998 7 5 88877765443222221000 001111 111100 0
Q ss_pred CCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch---hhHHHHHHhCCceEEE
Q 040467 79 NSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA---WSAEIAQEYGIFNALF 144 (387)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~---~~~~~a~~lgiP~v~~ 144 (387)
+... . ..........+..++++. +||+|++..... .+..++...|+|++.+
T Consensus 72 -----~~~~--~-~~~~~~~~~~l~~~l~~~-------~pDvv~~~~~~~~~~~~~~~~~~~~ip~v~~ 125 (375)
T 3beo_A 72 -----DRQT--L-IDITTRGLEGLDKVMKEA-------KPDIVLVHGDTTTTFIASLAAFYNQIPVGHV 125 (375)
T ss_dssp -----TTCC--H-HHHHHHHHHHHHHHHHHH-------CCSEEEEETTSHHHHHHHHHHHHTTCCEEEE
T ss_pred -----Cccc--H-HHHHHHHHHHHHHHHHHh-------CCCEEEEeCCchHHHHHHHHHHHHCCCEEEE
Confidence 0000 1 111122233466677777 999999854322 2345677889998864
No 35
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.47 E-value=2e-06 Score=79.36 Aligned_cols=115 Identities=15% Similarity=0.066 Sum_probs=61.8
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 80 (387)
|+|+||++++ +++....=+-.|.++|.+ + |+++.++.+-...+.... .+ ..+..... ..+.- ...
T Consensus 25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~-~~~~~~~~~~~tG~h~~m~~~------~~--~~~~i~~~-~~l~v--~~~ 91 (403)
T 3ot5_A 25 MAKIKVMSIF-GTRPEAIKMAPLVLALEK-EPETFESTVVITAQHREMLDQ------VL--EIFDIKPD-IDLDI--MKK 91 (403)
T ss_dssp -CCEEEEEEE-CSHHHHHHHHHHHHHHHT-CTTTEEEEEEECC-----CHH------HH--HHTTCCCS-EECCC--CC-
T ss_pred cccceEEEEE-ecChhHHHHHHHHHHHHh-CCCCCcEEEEEecCcHHHHHH------HH--HhcCCCCC-ccccc--CCC
Confidence 5567888776 566666667889999999 7 689876655433221111 11 11111000 00110 000
Q ss_pred CCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEe--CCCch-hhHHHHHHhCCceEEE
Q 040467 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIA--DMFFA-WSAEIAQEYGIFNALF 144 (387)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~--D~~~~-~~~~~a~~lgiP~v~~ 144 (387)
. ......+......+..++++. +||+|++ |.... .+..+|.++|||.+.+
T Consensus 92 ----~---~~~~~~~~~~~~~l~~~l~~~-------kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 92 ----G---QTLAEITSRVMNGINEVIAAE-------NPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp ----C---CCHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred ----C---CCHHHHHHHHHHHHHHHHHHc-------CCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 0 011122334455677788888 9999886 22233 4567888999998765
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.41 E-value=0.00027 Score=64.74 Aligned_cols=282 Identities=12% Similarity=0.074 Sum_probs=138.4
Q ss_pred ccEEEEEcCCC-cccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCC
Q 040467 5 KENIVMFPLMA-QGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSL 83 (387)
Q Consensus 5 ~~~il~~~~~~-~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 83 (387)
+.++.....|. -|.-.-...++++|++ +||+|++++...... ... .. .++.+..++.. ..+. .
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~-~G~~V~v~~~~~~~~-~~~-~~--~~i~~~~~~~~----~~~~-------~ 78 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAE-RGHEIHFITSGLPFR-LNK-VY--PNIYFHEVTVN----QYSV-------F 78 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHH-TTCEEEEECSSCC-----C-CC--TTEEEECCCCC---------------C
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHh-CCCEEEEEeCCCCCc-ccc-cC--CceEEEecccc----cccc-------c
Confidence 45667776664 4677888999999999 999999998753221 111 11 56667665432 1110 0
Q ss_pred CCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch--hhHHHHHHh---CCceEEEcchhHHHHHHHHHh
Q 040467 84 PFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA--WSAEIAQEY---GIFNALFVGGGSFGFACFYSL 158 (387)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~--~~~~~a~~l---giP~v~~~~~~~~~~~~~~~~ 158 (387)
.. ..... .....+..++++. +||+|++..... ....++.++ ++|++.........
T Consensus 79 ~~--~~~~~----~~~~~l~~~l~~~-------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~------- 138 (394)
T 2jjm_A 79 QY--PPYDL----ALASKMAEVAQRE-------NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT------- 138 (394)
T ss_dssp CS--CCHHH----HHHHHHHHHHHHH-------TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-------
T ss_pred cc--ccccH----HHHHHHHHHHHHc-------CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-------
Confidence 00 00111 1123355566666 899999875433 233444443 59988765432110
Q ss_pred hhcCCCCCCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHHHhhc--
Q 040467 159 WLNLPHRDSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYFSRKL-- 236 (387)
Q Consensus 159 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~-- 236 (387)
. .+.. ...... .....+.++.++..+-...+ .+...+
T Consensus 139 --~-----------~~~~--------------------~~~~~~---~~~~~~~ad~ii~~s~~~~~-----~~~~~~~~ 177 (394)
T 2jjm_A 139 --V-----------LGSD--------------------PSLNNL---IRFGIEQSDVVTAVSHSLIN-----ETHELVKP 177 (394)
T ss_dssp --T-----------TTTC--------------------TTTHHH---HHHHHHHSSEEEESCHHHHH-----HHHHHTCC
T ss_pred --c-----------cCCC--------------------HHHHHH---HHHHHhhCCEEEECCHHHHH-----HHHHhhCC
Confidence 0 0000 000000 11124557777776643222 122222
Q ss_pred CCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcC-CCHHHHHHHHHHHHh-CCCcEEEEEc
Q 040467 237 GRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNT-IAASQMMQLAMALEA-CGKNFIWVVK 314 (387)
Q Consensus 237 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~-~~~~~~~~~~~a~~~-~~~~~l~~~~ 314 (387)
+.++..+.......... ........+-+.-. ++..+++..|.... ...+.+-..+..+.+ .+.+++ .+|
T Consensus 178 ~~~~~vi~ngv~~~~~~-------~~~~~~~~~~~~~~-~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~-i~G 248 (394)
T 2jjm_A 178 NKDIQTVYNFIDERVYF-------KRDMTQLKKEYGIS-ESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLL-LVG 248 (394)
T ss_dssp SSCEEECCCCCCTTTCC-------CCCCHHHHHHTTCC----CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEE-EEC
T ss_pred cccEEEecCCccHHhcC-------CcchHHHHHHcCCC-CCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEE-EEC
Confidence 24666666544332110 01112222222211 13355666787753 233333333333333 344443 444
Q ss_pred CCCCCCCCcchhcccCCchhHHHHhccC--CCcEEeccccC-HHHhhCccCcceee----eccChhHHHHHHHcCCcccC
Q 040467 315 PPLGFDMNSEFRANEWLPEGFEERIKDS--GQGLVVQKWAP-QVEILSHKSISAFL----SHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~p-q~~lL~~~~~~~~v----~HGG~~s~~eal~~GvP~l~ 387 (387)
.+. ..+.+....... .++|.+.++.. -..++..+++ +| .-|..+++.||+++|+|+|+
T Consensus 249 ~g~-------------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~ 313 (394)
T 2jjm_A 249 DGP-------------EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIG 313 (394)
T ss_dssp CCT-------------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEE
T ss_pred Cch-------------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEE
Confidence 332 112222222211 25677777654 3568888665 76 55667899999999999984
No 37
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.33 E-value=7.5e-05 Score=68.99 Aligned_cols=43 Identities=9% Similarity=0.007 Sum_probs=35.0
Q ss_pred CCCccEEEEEcCC--CcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 2 AQRKENIVMFPLM--AQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 2 ~~~~~~il~~~~~--~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
+|++|||+++... .-|+-..+..+++.|++ +||+|++++....
T Consensus 37 ~~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~-~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 37 KLKGRSFVHVNSTSFGGGVAEILHSLVPLLRS-IGIEARWFVIEGP 81 (416)
T ss_dssp TTTTCEEEEEESCSSSSTHHHHHHHHHHHHHH-TTCEEEEEECCCC
T ss_pred hhhccEEEEEeCCCCCCCHHHHHHHHHHHHHh-CCCeEEEEEccCC
Confidence 3567889988765 35888899999999999 9999999886543
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.03 E-value=0.00012 Score=66.92 Aligned_cols=280 Identities=15% Similarity=0.052 Sum_probs=140.7
Q ss_pred EEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchh-hhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCCCCCc
Q 040467 9 VMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLK-KLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPFHL 87 (387)
Q Consensus 9 l~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (387)
+++-.|++-.+.=+-+|.++|.+ + ++..++.+-...+ .+.+... .++. ++.+ + -.+.. . . .
T Consensus 12 ~~~v~GtRpe~~k~~p~~~~l~~-~-~~~~~~~tgqh~~~~~~~~~~--~~~~---i~~~-~-~~l~~--~---~---~- 73 (385)
T 4hwg_A 12 VMTIVGTRPELIKLCCVISEFDK-H-TKHILVHTGQNYAYELNQVFF--DDMG---IRKP-D-YFLEV--A---A---D- 73 (385)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHH-H-SEEEEEECSCHHHHHHTHHHH--C-CC---CCCC-S-EECCC--C---C---C-
T ss_pred eeEEEEcCHhHHHHHHHHHHHHh-c-CCEEEEEeCCCCChhHHHHHH--hhCC---CCCC-c-eecCC--C---C---C-
Confidence 45557888888889999999999 8 8988887766544 2322110 1111 1111 0 00111 0 0 0
Q ss_pred hhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEe--CCCchhhHHHHHHhCCceEEEcchhHHHHHHHHHhhhcCCCC
Q 040467 88 FPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIA--DMFFAWSAEIAQEYGIFNALFVGGGSFGFACFYSLWLNLPHR 165 (387)
Q Consensus 88 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~--D~~~~~~~~~a~~lgiP~v~~~~~~~~~~~~~~~~~~~~p~~ 165 (387)
.....+......+.+++++. +||+||+ |..+.+++.+|.++|||++.+..
T Consensus 74 --~~~~~~~~~~~~l~~~l~~~-------kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea------------------- 125 (385)
T 4hwg_A 74 --NTAKSIGLVIEKVDEVLEKE-------KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA------------------- 125 (385)
T ss_dssp --CSHHHHHHHHHHHHHHHHHH-------CCSEEEEESCSGGGGGHHHHHHTTCCEEEESC-------------------
T ss_pred --CHHHHHHHHHHHHHHHHHhc-------CCcEEEEECCchHHHHHHHHHHhCCCEEEEeC-------------------
Confidence 11233344566677888888 9998876 44455557888899999766521
Q ss_pred CCCcccCCCCCCCcccCccccchhhhhcCCCChhHHHHHHHhhhhccCcEEEEechhhhcHHHHHHHHhhcC-CCeEEec
Q 040467 166 DSDEFLLPDFPEASRIHVTQMTKFLRLADGSDSLSVFFQKVLPQWMNADGILFNTVEELDKIGLMYFSRKLG-RPVWPVG 244 (387)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~-~~~~~vG 244 (387)
++.. .. ..++. +.++.+ ..+.++.++..+-..-+ .+.+...+ .+++.+|
T Consensus 126 --------glrs---~~-~~~pe---------e~nR~~-----~~~~a~~~~~~te~~~~----~l~~~G~~~~~I~vtG 175 (385)
T 4hwg_A 126 --------GNRC---FD-QRVPE---------EINRKI-----IDHISDVNITLTEHARR----YLIAEGLPAELTFKSG 175 (385)
T ss_dssp --------CCCC---SC-TTSTH---------HHHHHH-----HHHHCSEEEESSHHHHH----HHHHTTCCGGGEEECC
T ss_pred --------CCcc---cc-ccCcH---------HHHHHH-----HHhhhceeecCCHHHHH----HHHHcCCCcCcEEEEC
Confidence 0000 00 00000 011111 01224444444432111 11122222 4588888
Q ss_pred cccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCC-HHHHHHHHHHHHhC----CCcEEEEEcCCCCC
Q 040467 245 SLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIA-ASQMMQLAMALEAC----GKNFIWVVKPPLGF 319 (387)
Q Consensus 245 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~-~~~~~~~~~a~~~~----~~~~l~~~~~~~~~ 319 (387)
-...+.... ........++.+-+.-. +++.|+++.|...+.. .+.+..+++|+.+. +.++|+.....
T Consensus 176 np~~D~~~~----~~~~~~~~~~~~~lgl~-~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--- 247 (385)
T 4hwg_A 176 SHMPEVLDR----FMPKILKSDILDKLSLT-PKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--- 247 (385)
T ss_dssp CSHHHHHHH----HHHHHHHCCHHHHTTCC-TTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH---
T ss_pred CchHHHHHH----hhhhcchhHHHHHcCCC-cCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH---
Confidence 533221000 00000011222223222 2458899988765443 24566777777653 56677655311
Q ss_pred CCCcchhcccCCchhHHHHh---ccCCCcEEeccccCH---HHhhCccCcceeeeccChhHHHHHHHcCCcccC
Q 040467 320 DMNSEFRANEWLPEGFEERI---KDSGQGLVVQKWAPQ---VEILSHKSISAFLSHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~pq---~~lL~~~~~~~~v~HGG~~s~~eal~~GvP~l~ 387 (387)
. ....++. ....+|+.+.+.+++ ..+++++++ +|+-.|.. +.||.+.|+|+|.
T Consensus 248 -----------~-~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGgv-~~EA~alG~Pvv~ 306 (385)
T 4hwg_A 248 -----------T-KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGTI-TEEASILNLPALN 306 (385)
T ss_dssp -----------H-HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTTH-HHHHHHTTCCEEE
T ss_pred -----------H-HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCccH-HHHHHHcCCCEEE
Confidence 0 0111111 101357888776664 468888664 89987764 6999999999973
No 39
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.94 E-value=0.0033 Score=60.53 Aligned_cols=42 Identities=24% Similarity=0.334 Sum_probs=33.2
Q ss_pred CcEEeccccCHHH---hhCccCcceee---eccChhHHHHHHHcCCcccC
Q 040467 344 QGLVVQKWAPQVE---ILSHKSISAFL---SHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 344 ~~v~~~~~~pq~~---lL~~~~~~~~v---~HGG~~s~~eal~~GvP~l~ 387 (387)
++|.+.+++|+.+ ++..+++ || ..|+.+++.||+++|+|+|+
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~ 481 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLT 481 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEB
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEe
Confidence 6899999998654 5777665 65 23777899999999999985
No 40
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=97.89 E-value=0.00062 Score=61.59 Aligned_cols=51 Identities=10% Similarity=0.105 Sum_probs=37.2
Q ss_pred EEEEEcC---CCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEecc
Q 040467 7 NIVMFPL---MAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIP 65 (387)
Q Consensus 7 ~il~~~~---~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~ 65 (387)
||++++. +.-|.-.-+..++++|++ +||+|++++...... .. .++++..++
T Consensus 2 kIl~i~~~~~~~gG~~~~~~~l~~~L~~-~G~~V~v~~~~~~~~--~~-----~~~~v~~~~ 55 (374)
T 2iw1_A 2 IVAFCLYKYFPFGGLQRDFMRIASTVAA-RGHHVRVYTQSWEGD--CP-----KAFELIQVP 55 (374)
T ss_dssp CEEEECSEECTTCHHHHHHHHHHHHHHH-TTCCEEEEESEECSC--CC-----TTCEEEECC
T ss_pred eEEEEEeecCCCcchhhHHHHHHHHHHh-CCCeEEEEecCCCCC--CC-----CCcEEEEEc
Confidence 5888754 456788889999999999 999999998653211 11 456666665
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.87 E-value=0.00057 Score=64.44 Aligned_cols=37 Identities=16% Similarity=0.057 Sum_probs=29.8
Q ss_pred cEEEEEcCC------CcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLM------AQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~------~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|||++++.. .-|=-.-+..|+++|++ +||+|+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~-~G~~V~vi~~~ 43 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEA-HGVRTRTLIPG 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHT-TTCEEEEEEEC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHH-cCCeEEEEecc
Confidence 468988762 24556778899999999 99999999864
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.83 E-value=0.00052 Score=64.69 Aligned_cols=37 Identities=8% Similarity=-0.091 Sum_probs=29.4
Q ss_pred cEEEEEcCC------CcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLM------AQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~------~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|||++++.. .-|=-.-...|+++|++ +||+|+++++.
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~-~G~~V~vi~~~ 43 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIA-DGVDARVLLPA 43 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHH-TTCEEEEEEEC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHH-cCCEEEEEecC
Confidence 468988762 23555678899999999 99999999864
No 43
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=97.63 E-value=0.0024 Score=63.70 Aligned_cols=127 Identities=15% Similarity=0.183 Sum_probs=65.8
Q ss_pred ccEEEEEcCCCc-------------ccHHHHH--------HHHHHHHhCCCcEEE----EEeCCc-------chhhhhhc
Q 040467 5 KENIVMFPLMAQ-------------GHTIPFL--------ALALHLENTNRYTIT----FVNTPS-------NLKKLKSS 52 (387)
Q Consensus 5 ~~~il~~~~~~~-------------GH~~P~l--------~la~~L~~~rGh~Vt----~~~~~~-------~~~~~~~~ 52 (387)
.++|++++.-+. |+..=.+ .||++|++ +||+|+ ++|... +....+..
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~-~G~~V~~~V~v~Tr~~~~~~g~~y~~~~e~i 356 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQ-QGLNIKPRILILTRLLPDAVGTTCGERLERV 356 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHH-TTCCCCCEEEEEEECCTTCTTSSTTSSEEEC
T ss_pred eeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHH-CCCccceeeEEEeCCCCCCCCCccCCcceee
Confidence 357888887554 5555555 48888899 999987 776321 11122221
Q ss_pred C-CCCCCeeEEeccCCCCCCCCCCCCCCCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch--h
Q 040467 53 L-PQNSSIHLREIPFDGIAHDLPPCTENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA--W 129 (387)
Q Consensus 53 ~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~--~ 129 (387)
. . .++....+|.... ++.......... .+..+.. + ....++.++... .+ +||+|.+..... .
T Consensus 357 ~~~--~gv~I~RvP~~~~-~g~l~~~l~k~~----L~~~L~~-F--~~~~l~~il~~~----~~-~PDVIHsH~~~sglv 421 (816)
T 3s28_A 357 YDS--EYCDILRVPFRTE-KGIVRKWISRFE----VWPYLET-Y--TEDAAVELSKEL----NG-KPDLIIGNYSDGNLV 421 (816)
T ss_dssp TTC--SSEEEEEECEEET-TEEECSCCCTTT----CGGGHHH-H--HHHHHHHHHHHC----SS-CCSEEEEEHHHHHHH
T ss_pred cCc--CCeEEEEecCCCc-cccccccccHHH----HHHHHHH-H--HHHHHHHHHHhc----CC-CCeEEEeCCchHHHH
Confidence 1 1 4778887774310 010011111110 0111111 1 112233344332 22 799998764322 4
Q ss_pred hHHHHHHhCCceEEEcch
Q 040467 130 SAEIAQEYGIFNALFVGG 147 (387)
Q Consensus 130 ~~~~a~~lgiP~v~~~~~ 147 (387)
+..+++.+|+|.|....+
T Consensus 422 a~llar~~gvP~V~T~Hs 439 (816)
T 3s28_A 422 ASLLAHKLGVTQCTIAHA 439 (816)
T ss_dssp HHHHHHHHTCCEEEECSC
T ss_pred HHHHHHHcCCCEEEEEec
Confidence 567788899999886543
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.23 E-value=0.07 Score=48.73 Aligned_cols=38 Identities=5% Similarity=0.058 Sum_probs=28.8
Q ss_pred cEEEEEcC--C-CcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 6 ENIVMFPL--M-AQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 6 ~~il~~~~--~-~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
|||++++. | .-|--.-...|+++|++ + |+|++++....
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~-~-~~V~v~~~~~~ 41 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISK-A-HEVIVFGIHAF 41 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTT-T-SEEEEEEESCC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHh-c-CCeEEEeecCC
Confidence 46888753 3 34666778999999999 9 99999985443
No 45
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.15 E-value=0.029 Score=51.47 Aligned_cols=43 Identities=9% Similarity=0.089 Sum_probs=32.6
Q ss_pred CCcEEeccccCHHH---hhCccCcceeee---c-cChhHHHHHH-------HcCCcccC
Q 040467 343 GQGLVVQKWAPQVE---ILSHKSISAFLS---H-CGWNSVLEAL-------SHRVPIIG 387 (387)
Q Consensus 343 ~~~v~~~~~~pq~~---lL~~~~~~~~v~---H-GG~~s~~eal-------~~GvP~l~ 387 (387)
.++|.+.+++|+.+ ++..+++ ||. + |-.+++.||+ ++|+|+|+
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIa 320 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVC 320 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEE
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEE
Confidence 56899999999765 5777665 553 2 3446789999 99999985
No 46
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.11 E-value=0.042 Score=49.18 Aligned_cols=105 Identities=13% Similarity=0.032 Sum_probs=70.0
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhC-CCcEEEEEeCCcchhhhhhcCCCCCCee-EEeccCCCCCCCCCCCCCCCCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENT-NRYTITFVNTPSNLKKLKSSLPQNSSIH-LREIPFDGIAHDLPPCTENSDS 82 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~-rGh~Vt~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~ 82 (387)
..|||++-..+.|++.=.+++.++|+++ .+.+|++++.+.+.+.++.. +.+. ++.++.. .
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~----p~vd~vi~~~~~--------------~ 69 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN----PNIDELIVVDKK--------------G 69 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC----TTCSEEEEECCS--------------S
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC----CCccEEEEeCcc--------------c
Confidence 4589999999999999999999999984 49999999998888777652 3443 5544310 0
Q ss_pred CCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCC-eEEEeCCCchhhHHHHHHhCCceEE
Q 040467 83 LPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKP-VCIIADMFFAWSAEIAQEYGIFNAL 143 (387)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~p-D~vV~D~~~~~~~~~a~~lgiP~v~ 143 (387)
....+ . .+..+++++... ++ |++|.=.-..-...++...|+|...
T Consensus 70 ----~~~~~----~----~~~~l~~~Lr~~----~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 70 ----RHNSI----S----GLNEVAREINAK----GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp ----HHHHH----H----HHHHHHHHHHHH----CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred ----ccccH----H----HHHHHHHHHhhC----CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 00011 1 122333333322 89 9998655455556677788988644
No 47
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.82 E-value=0.13 Score=45.79 Aligned_cols=46 Identities=13% Similarity=0.017 Sum_probs=39.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENT-NRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~-rGh~Vt~~~~~~~~~~~~~ 51 (387)
+||+++.....|++.=..++.++|+++ .+.+|++++.+.+.+.++.
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~ 47 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc
Confidence 379999999999999999999999983 3999999999888776655
No 48
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.74 E-value=0.0044 Score=49.56 Aligned_cols=93 Identities=10% Similarity=0.045 Sum_probs=55.9
Q ss_pred eEEEecCCCcCCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCCCCCcchhcccCCchhHHH--HhccCCCcEEeccccCH-
Q 040467 279 VIYVSFGSQNTIAASQMMQLAMALEAC-GKNFIWVVKPPLGFDMNSEFRANEWLPEGFEE--RIKDSGQGLVVQKWAPQ- 354 (387)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~a~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~pq- 354 (387)
.+++..|+... ......+++++++. +.++++.-.++. . ..+ ..+.. +. ..++|+.+.+|+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~----~------~~l-~~~~~~~~~-~l~~~v~~~g~~~~~ 89 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSK----G------DHA-ERYARKIMK-IAPDNVKFLGSVSEE 89 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCT----T------STH-HHHHHHHHH-HSCTTEEEEESCCHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCcc----H------HHH-HHHHHhhhc-ccCCcEEEeCCCCHH
Confidence 45566777652 23355677777776 556555433221 0 011 11111 11 11568999999997
Q ss_pred --HHhhCccCcceeee---c-cChhHHHHHHHcCCcccC
Q 040467 355 --VEILSHKSISAFLS---H-CGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 355 --~~lL~~~~~~~~v~---H-GG~~s~~eal~~GvP~l~ 387 (387)
..++..+++ +|. + |..+++.||+++|+|+|+
T Consensus 90 e~~~~~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~ 126 (177)
T 2f9f_A 90 ELIDLYSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIA 126 (177)
T ss_dssp HHHHHHHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEE
Confidence 557778775 555 2 334599999999999985
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=96.66 E-value=0.0063 Score=60.25 Aligned_cols=100 Identities=15% Similarity=0.274 Sum_probs=70.8
Q ss_pred CCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHh---ccCCCcEEecccc
Q 040467 276 CNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERI---KDSGQGLVVQKWA 352 (387)
Q Consensus 276 ~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~ 352 (387)
++.+||.||-+....+++.+..-.+-|++.+--++|....+. ..-..+.... +-.++.+++.+..
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~------------~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA------------VGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG------------GGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH------------HHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 355999999999999999999999999998888888876552 0111121111 1114568888999
Q ss_pred CHHHhhCc-cCcceeee---ccChhHHHHHHHcCCcccC
Q 040467 353 PQVEILSH-KSISAFLS---HCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 353 pq~~lL~~-~~~~~~v~---HGG~~s~~eal~~GvP~l~ 387 (387)
|+.+-|.. ..++.++- .+|.+|++|||++|||+|.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt 627 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVT 627 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEB
T ss_pred CHHHHHHHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEE
Confidence 86664432 22334654 7889999999999999983
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.50 E-value=0.01 Score=56.66 Aligned_cols=97 Identities=8% Similarity=0.055 Sum_probs=66.0
Q ss_pred eeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEE--EcCCCCCCCCcchhcccCCchhHH-HHhccCCCcEEeccccCH
Q 040467 278 SVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWV--VKPPLGFDMNSEFRANEWLPEGFE-ERIKDSGQGLVVQKWAPQ 354 (387)
Q Consensus 278 ~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~pq 354 (387)
.++|.+|++.....++.++...+.+++.+..++|. .+... ... ..+-..+. ..+ .+.+.+.+++|+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~------g~~--~~~~~~~~~~GI---~~Rv~F~g~~p~ 509 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN------GIT--HPYVERFIKSYL---GDSATAHPHSPY 509 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC------GGG--HHHHHHHHHHHH---GGGEEEECCCCH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc------hhh--HHHHHHHHHcCC---CccEEEcCCCCH
Confidence 59999999999999999999999998887777764 34221 000 00111111 112 246778899997
Q ss_pred HHhh---CccCcceee---eccChhHHHHHHHcCCcccC
Q 040467 355 VEIL---SHKSISAFL---SHCGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 355 ~~lL---~~~~~~~~v---~HGG~~s~~eal~~GvP~l~ 387 (387)
.+.| ..+++ |+ ..+|.+|+.|||++|||+|+
T Consensus 510 ~e~la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVT 546 (631)
T 3q3e_A 510 HQYLRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVC 546 (631)
T ss_dssp HHHHHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEe
Confidence 7654 56555 43 33788999999999999984
No 51
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=96.32 E-value=0.36 Score=43.46 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=26.8
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+|.+.+ -+.|-..-...|+++|.+ +| +|.+.+...
T Consensus 42 ~iwih~-~s~G~~~~~~~L~~~L~~-~~-~v~v~~~~~ 76 (374)
T 2xci_A 42 ALWVHT-ASIGEFNTFLPILKELKR-EH-RILLTYFSP 76 (374)
T ss_dssp CEEEEC-SSHHHHHHHHHHHHHHHH-HS-CEEEEESCG
T ss_pred CEEEEc-CCHHHHHHHHHHHHHHHh-cC-CEEEEEcCC
Confidence 454444 566889999999999999 99 888776543
No 52
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=95.72 E-value=0.031 Score=43.75 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=53.5
Q ss_pred eeEEEecCCCcCCCHHHHHHHHHHHHhCC--CcE-EEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCH
Q 040467 278 SVIYVSFGSQNTIAASQMMQLAMALEACG--KNF-IWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQ 354 (387)
Q Consensus 278 ~~v~vs~GS~~~~~~~~~~~~~~a~~~~~--~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq 354 (387)
+.+++..|+... ......+++++.... .++ ++.+|.+. ....+.......+.++.+ +|+|+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~-------------~~~~~~~~~~~~~~~v~~-g~~~~ 65 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP-------------DEKKIKLLAQKLGVKAEF-GFVNS 65 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST-------------THHHHHHHHHHHTCEEEC-CCCCH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc-------------cHHHHHHHHHHcCCeEEE-eecCH
Confidence 467788888753 223455666666542 123 33344332 112222222211347888 99997
Q ss_pred HH---hhCccCcceeee----ccChhHHHHHHHcCC-cccC
Q 040467 355 VE---ILSHKSISAFLS----HCGWNSVLEALSHRV-PIIG 387 (387)
Q Consensus 355 ~~---lL~~~~~~~~v~----HGG~~s~~eal~~Gv-P~l~ 387 (387)
.+ ++..+++ +|. -|...++.||+++|+ |+|+
T Consensus 66 ~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~ 104 (166)
T 3qhp_A 66 NELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIA 104 (166)
T ss_dssp HHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEe
Confidence 54 6777665 664 344569999999996 9984
No 53
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=94.69 E-value=0.19 Score=40.50 Aligned_cols=41 Identities=15% Similarity=0.023 Sum_probs=31.4
Q ss_pred cEEe-ccccCHH---HhhCccCcceeeec----cChhHHHHHHHcCCcccC
Q 040467 345 GLVV-QKWAPQV---EILSHKSISAFLSH----CGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 345 ~v~~-~~~~pq~---~lL~~~~~~~~v~H----GG~~s~~eal~~GvP~l~ 387 (387)
++.+ .+++++. .++..+++ +|.- |...++.||+++|+|+|+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~ 144 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIA 144 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEE
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEE
Confidence 8888 9999954 46777665 5532 335689999999999984
No 54
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=91.42 E-value=0.88 Score=38.07 Aligned_cols=56 Identities=18% Similarity=0.178 Sum_probs=37.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEec
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREI 64 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~ 64 (387)
||||+.-=-+. |.--+..|+++|++ .| +|+++.+...+...-....-...+++..+
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~-~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~ 57 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKS-LG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKI 57 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCTTSCCSCCCSSCEEEEEE
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHh-cC-CEEEEecCCCccCCccceecCCCeEEEEe
Confidence 36777665443 44558899999999 98 99999998777655543321233444433
No 55
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=89.15 E-value=0.48 Score=38.60 Aligned_cols=48 Identities=17% Similarity=0.097 Sum_probs=41.1
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
|.++.||++--.|+.|-+. ...|.++|++ +|++|.++.++.-...+..
T Consensus 1 m~~~k~IllgvTGaiaa~k-~~~ll~~L~~-~g~eV~vv~T~~A~~fi~~ 48 (209)
T 3zqu_A 1 MSGPERITLAMTGASGAQY-GLRLLDCLVQ-EEREVHFLISKAAQLVMAT 48 (209)
T ss_dssp CCSCSEEEEEECSSSCHHH-HHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEECccHHHHHHH
Confidence 4456789999999988887 8999999999 9999999998887776655
No 56
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=88.34 E-value=0.76 Score=38.65 Aligned_cols=42 Identities=14% Similarity=0.075 Sum_probs=28.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
|||+.==-+. +.--+..|+++|.+ .| +|+++.+...+...-.
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~-~g-~V~VvAP~~~~Sg~g~ 44 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKS-LG-RVVVVAPDRNLSGVGH 44 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCTTSCC
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHh-CC-CEEEEeeCCCCccccc
Confidence 5666543332 33347889999999 99 4999988777665444
No 57
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=88.28 E-value=1.7 Score=39.35 Aligned_cols=37 Identities=8% Similarity=0.009 Sum_probs=28.6
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
||++.+|+++..+..+ +.+++++++ .|++|.++..+.
T Consensus 4 m~~~~~ilI~g~g~~~-----~~~~~a~~~-~G~~~v~v~~~~ 40 (403)
T 4dim_A 4 MYDNKRLLILGAGRGQ-----LGLYKAAKE-LGIHTIAGTMPN 40 (403)
T ss_dssp --CCCEEEEECCCGGG-----HHHHHHHHH-HTCEEEEEECSS
T ss_pred ccCCCEEEEECCcHhH-----HHHHHHHHH-CCCEEEEEcCCC
Confidence 5667789999887643 669999999 999999997543
No 58
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=88.26 E-value=3.1 Score=36.35 Aligned_cols=36 Identities=17% Similarity=-0.023 Sum_probs=25.4
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
||+++||+|+..+..+ ...-++|.+ +||+|..+.+.
T Consensus 4 m~~~mrivf~Gt~~fa-----~~~L~~L~~-~~~~v~~Vvt~ 39 (318)
T 3q0i_A 4 MSQSLRIVFAGTPDFA-----ARHLAALLS-SEHEIIAVYTQ 39 (318)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHT-SSSEEEEEECC
T ss_pred cccCCEEEEEecCHHH-----HHHHHHHHH-CCCcEEEEEcC
Confidence 6778999999887543 355678889 99999866653
No 59
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.03 E-value=0.31 Score=46.31 Aligned_cols=95 Identities=6% Similarity=-0.089 Sum_probs=51.6
Q ss_pred eEEEecCCCcC-CCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHH-
Q 040467 279 VIYVSFGSQNT-IAASQMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVE- 356 (387)
Q Consensus 279 ~v~vs~GS~~~-~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~- 356 (387)
++++..|.... ...+.+.+.+.-+.+.+.++++.-.++. .....+.......+.++.+..+.++..
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 395 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK------------KFEKLLKSMEEKYPGKVRAVVKFNAPLA 395 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH------------HHHHHHHHHHHHSTTTEEEECSCCHHHH
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc------------hHHHHHHHHHhhcCCceEEEEeccHHHH
Confidence 45566676642 2233333333333445666655433321 011122222223367788878877654
Q ss_pred --hhCccCcceeeec----cChhHHHHHHHcCCcccC
Q 040467 357 --ILSHKSISAFLSH----CGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 357 --lL~~~~~~~~v~H----GG~~s~~eal~~GvP~l~ 387 (387)
++..+++ ||.= |=..++.||+++|+|+|+
T Consensus 396 ~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~ 430 (536)
T 3vue_A 396 HLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCAC 430 (536)
T ss_dssp HHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEE
Confidence 5666665 6642 223489999999999984
No 60
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=87.86 E-value=5 Score=32.16 Aligned_cols=55 Identities=13% Similarity=0.174 Sum_probs=41.9
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc------hhhhhhcCCCCCCeeEEecc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN------LKKLKSSLPQNSSIHLREIP 65 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~------~~~~~~~~~~~~~i~~~~~~ 65 (387)
+..|++++..+.|-..-.+.+|.+.+. +|++|.|+..-.. ...++. .++++....
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g-~G~rV~~vQF~Kg~~~~gE~~~l~~-----L~v~~~~~g 88 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVG-HGKNVGVVQFIKGTWPNGERNLLEP-----HGVEFQVMA 88 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHH-TTCCEEEEESSCCSSCCHHHHHHGG-----GTCEEEECC
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHH-CCCeEEEEEeeCCCCCccHHHHHHh-----CCcEEEEcc
Confidence 457999999999999999999999999 9999999954332 234444 346666554
No 61
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=85.76 E-value=0.49 Score=43.31 Aligned_cols=40 Identities=13% Similarity=0.219 Sum_probs=31.1
Q ss_pred CccEEEEEcCCCc-----ccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 4 RKENIVMFPLMAQ-----GHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 4 ~~~~il~~~~~~~-----GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+++||++++.... |=.+....+|++|++ +||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~-~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDN-KKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCT-TTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHH-cCCceEEEEecC
Confidence 4678998886422 333568999999999 999999999753
No 62
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=85.68 E-value=4.1 Score=33.69 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=30.2
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
..++++|.|+-.|..|- .||+.|++ +||+|+.+...
T Consensus 3 ~~~~mkI~IIG~G~~G~-----sLA~~L~~-~G~~V~~~~~~ 38 (232)
T 3dfu_A 3 QAPRLRVGIFDDGSSTV-----NMAEKLDS-VGHYVTVLHAP 38 (232)
T ss_dssp CCCCCEEEEECCSCCCS-----CHHHHHHH-TTCEEEECSSG
T ss_pred CCCCcEEEEEeeCHHHH-----HHHHHHHH-CCCEEEEecCH
Confidence 34578999999999885 58999999 99999987653
No 63
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=85.04 E-value=1.5 Score=34.56 Aligned_cols=44 Identities=9% Similarity=0.119 Sum_probs=37.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
.||++.-.++.|=+. ...+.++|++ +|++|.++.++.-...+..
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~-~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKS-KFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTT-TCSEEEEEECTGGGGGSCH
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHH-CCCEEEEEECcCHHHHhhH
Confidence 489999999877665 8899999999 9999999998877666554
No 64
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=84.98 E-value=0.94 Score=36.80 Aligned_cols=47 Identities=11% Similarity=-0.102 Sum_probs=33.9
Q ss_pred CCCCccEEEEEcCCCcccHHH-HHHHHHHHHhCCCcEEEEEeCCcchhhh
Q 040467 1 MAQRKENIVMFPLMAQGHTIP-FLALALHLENTNRYTITFVNTPSNLKKL 49 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P-~l~la~~L~~~rGh~Vt~~~~~~~~~~~ 49 (387)
||.++.||++--.|+ +...- ...+.+.|++ +|++|.++.++.-...+
T Consensus 1 m~l~~k~IllgiTGs-iaayk~~~~ll~~L~~-~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 1 MSLKGKRIGFGFTGS-HCTYEEVMPHLEKLIA-EGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp -CCTTCEEEEEECSC-GGGGTTSHHHHHHHHH-TTCEEEEEECC------
T ss_pred CCCCCCEEEEEEECh-HHHHHHHHHHHHHHHh-CCCEEEEEEehHHHHHH
Confidence 566677899998887 44554 7899999999 99999999887655333
No 65
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=84.67 E-value=5.4 Score=33.30 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=30.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhc
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSS 52 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~ 52 (387)
|||+.-=-+. |.--+..|+++|++ .| +|+++.|...+...-..
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~-~g-~V~VVAP~~~~Sg~g~s 44 (247)
T 1j9j_A 2 RILVTNDDGI-QSKGIIVLAELLSE-EH-EVFVVAPDKERSATGHS 44 (247)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCTTCTTC
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHh-CC-CEEEEecCCCCcCCccc
Confidence 4655544333 33448889999999 98 89999998877665553
No 66
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=84.43 E-value=11 Score=31.65 Aligned_cols=43 Identities=16% Similarity=0.069 Sum_probs=31.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
||||+.-=-+. |.--+..|+++|++ .| +|+++.|...+...-.
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~-~g-~V~VVAP~~~~Sg~g~ 44 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALRE-FA-DVQVVAPDRNRSGASN 44 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEESSCCTTCTT
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHh-CC-cEEEEeeCCCCcCccC
Confidence 46766655443 44558889999998 87 9999999887765555
No 67
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=83.15 E-value=1.5 Score=35.38 Aligned_cols=49 Identities=10% Similarity=-0.143 Sum_probs=37.7
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhh
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLK 50 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~ 50 (387)
|..++.||++--.|+.+=+.-.+.+.++|++ +|++|.++.++.-...+.
T Consensus 3 m~l~~k~I~lgiTGs~aa~~k~~~ll~~L~~-~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 3 MNFAGKHVGFGLTGSHCTYHEVLPQMERLVE-LGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp CCCTTCEEEEECCSCGGGGGGTHHHHHHHHH-TTCEEEEECSSCSCCTTC
T ss_pred CCcCCCEEEEEEEChHHHHHHHHHHHHHHhh-CCCEEEEEEChhHHHHHH
Confidence 3345678999999985444378999999999 999999998876554443
No 68
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=82.35 E-value=8.5 Score=30.62 Aligned_cols=37 Identities=24% Similarity=0.412 Sum_probs=29.9
Q ss_pred EEEEc--CCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 8 IVMFP--LMAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 8 il~~~--~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
++.+. -++.|-..-...||..|++ +|++|.++-....
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~-~g~~vlliD~D~~ 41 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSR-SGYNIAVVDTDPQ 41 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEECCCC
Confidence 44443 3688999999999999999 9999999975443
No 69
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=82.10 E-value=6 Score=34.71 Aligned_cols=34 Identities=15% Similarity=0.055 Sum_probs=23.2
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|.++||+|+. --+-...+.++|.+ +||+|..+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~-~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRK-EGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHH-CCCeEEEEEe
Confidence 3458999993 22333456789999 9999986654
No 70
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=81.86 E-value=1.8 Score=32.60 Aligned_cols=38 Identities=16% Similarity=0.216 Sum_probs=34.4
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++.+|++.+.+.-.|-....=++..|+. +|++|..+..
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~-~G~~Vi~lG~ 39 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTN-AGFNVVNIGV 39 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHH-CCCEEEECCC
Confidence 4678999999999999999999999999 9999997763
No 71
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=80.94 E-value=9.8 Score=33.43 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=33.6
Q ss_pred cEEEEEcC-CCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchh
Q 040467 6 ENIVMFPL-MAQGHTIPFLALALHLENTNRYTITFVNTPSNLK 47 (387)
Q Consensus 6 ~~il~~~~-~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~ 47 (387)
.+|+|++. |+.|-..-..++|..|++ +|++|.++.......
T Consensus 16 ~~i~~~sgkGGvGKTt~a~~lA~~la~-~g~~vllid~D~~~~ 57 (334)
T 3iqw_A 16 LRWIFVGGKGGVGKTTTSCSLAIQLAK-VRRSVLLLSTDPAHN 57 (334)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHTT-SSSCEEEEECCSSCH
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHh-CCCcEEEEECCCCCC
Confidence 45666554 788999999999999999 999999998765433
No 72
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=80.92 E-value=7.4 Score=35.43 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=53.5
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 80 (387)
|..++.||+++..+.. + | .+.++.++ .|++|+++........... . .--.+..++.. .
T Consensus 1 M~~~~k~l~Il~~~~~-~--~--~i~~aa~~-lG~~vv~v~~~~~~~~~~~--~--~~d~~~~~~~~------~------ 58 (425)
T 3vot_A 1 MTKRNKNLAIICQNKH-L--P--FIFEEAER-LGLKVTFFYNSAEDFPGNL--P--AVERCVPLPLF------E------ 58 (425)
T ss_dssp -CCCCCEEEEECCCTT-C--C--HHHHHHHH-TTCEEEEEEETTSCCCCSC--T--TEEEEEEECTT------T------
T ss_pred CCCCCcEEEEECCChh-H--H--HHHHHHHH-CCCEEEEEECCCcccccCH--h--hccEEEecCCC------C------
Confidence 5556677888865543 2 2 35678889 9999999864332110000 0 11123333210 0
Q ss_pred CCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEe--CCCchhhHHHHHHhCCce
Q 040467 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIA--DMFFAWSAEIAQEYGIFN 141 (387)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~--D~~~~~~~~~a~~lgiP~ 141 (387)
+. +...+.++++.++. ++|.|+. |.....+..+++++|+|.
T Consensus 59 ------d~-------~~~~~~~~~~~~~~-------~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 59 ------DE-------EAAMDVVRQTFVEF-------PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ------CH-------HHHHHHHHHHHHHS-------CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ------CH-------HHHHHHHHHhhhhc-------CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 00 12233344555555 7899884 444446677889999983
No 73
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=80.19 E-value=7.2 Score=33.20 Aligned_cols=55 Identities=11% Similarity=0.044 Sum_probs=35.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEec
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREI 64 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~ 64 (387)
|||+.-=-+. +.--+..|+++|++ .| +|+++.|...+...-....-...+++..+
T Consensus 2 ~ILlTNDDGi-~ApGi~aL~~aL~~-~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~ 56 (280)
T 1l5x_A 2 KILVTNDDGV-HSPGLRLLYQFALS-LG-DVDVVAPESPKSATGLGITLHKPLRMYEV 56 (280)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHGG-GS-EEEEEEESSCTTTSCSSCCCSSCBCEEEE
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHh-CC-CEEEEecCCCCcCCcccccCCCCeEEEEe
Confidence 4665544333 33448889999999 98 89999998877665553322233444444
No 74
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=79.91 E-value=4 Score=35.59 Aligned_cols=46 Identities=7% Similarity=0.036 Sum_probs=40.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhC-CCcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENT-NRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~-rGh~Vt~~~~~~~~~~~~~ 51 (387)
+||+++-..+.|++.=..++.++|+++ .+.+|++++.+.+.+.++.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 379999999999999999999999984 4999999999888877765
No 75
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=78.54 E-value=8.3 Score=33.58 Aligned_cols=34 Identities=6% Similarity=0.084 Sum_probs=25.1
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCC-C-cEEEEEeCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTN-R-YTITFVNTP 43 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~r-G-h~Vt~~~~~ 43 (387)
|++++|+++..+.. +++++.|++ . | ++|.++...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~-~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVK-EFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHH-HCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHH-hcCCCEEEEEeCC
Confidence 34578999876665 478999988 5 7 888877543
No 76
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=77.99 E-value=1.7 Score=34.89 Aligned_cols=47 Identities=9% Similarity=-0.025 Sum_probs=38.4
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
+++.||++.-.|+.|=+. ...+.+.|++ +|++|.++.++.-...+..
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKS-FFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTT-TSSEEEEEECHHHHHHSCH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 445689999999987775 7899999999 9999999998776655544
No 77
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=76.90 E-value=5.3 Score=37.80 Aligned_cols=38 Identities=13% Similarity=0.104 Sum_probs=28.4
Q ss_pred CccEEEEEcCCC------cccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMA------QGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~------~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.+||||++++-. -|=-.-.-.|+++|++ +||+|++++|
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~-~G~~V~Vi~P 51 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAA-NGHRVMVISP 51 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHT-TTCEEEEEEE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHH-cCCeEEEEec
Confidence 478999997521 1222346689999999 9999999984
No 78
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=76.82 E-value=2.8 Score=33.71 Aligned_cols=44 Identities=14% Similarity=0.049 Sum_probs=37.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCC-CcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTN-RYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~~~~~~~~~~~ 51 (387)
+||++--.|+.|-+. ...+.++|++ + |++|.++.++.-...+..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~-~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALRE-MPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHT-CTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHh-ccCCEEEEEECchHHHHhHH
Confidence 368999999987766 8999999999 9 999999998887777764
No 79
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=76.65 E-value=24 Score=28.94 Aligned_cols=103 Identities=6% Similarity=0.009 Sum_probs=61.3
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeCC-cc---hhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNTP-SN---LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTE 78 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~~-~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 78 (387)
++||+|+.++... .+.++.++|.+ . +++|..+.+. +. .++.++ .++.+..++.. .+..
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~-~~~~~~I~~Vvt~~~~~~~~~~A~~-----~gIp~~~~~~~----~~~~--- 85 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCRE-GRIPGRVAVVISDRADAYGLERARR-----AGVDALHMDPA----AYPS--- 85 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHT-TSSSEEEEEEEESSTTCHHHHHHHH-----TTCEEEECCGG----GSSS---
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHh-CCCCCeEEEEEcCCCchHHHHHHHH-----cCCCEEEECcc----cccc---
Confidence 4689999877743 36677778887 6 7888655532 22 233444 67777755321 1100
Q ss_pred CCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 79 NSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
. +...+.+.+.+++. +||+||+=.+.. ....+-+.....++-+.+
T Consensus 86 ----------r------~~~~~~~~~~l~~~-------~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 86 ----------R------TAFDAALAERLQAY-------GVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp ----------H------HHHHHHHHHHHHHT-------TCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred ----------h------hhccHHHHHHHHhc-------CCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 0 12233455667777 899998766533 556666677666776643
No 80
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=76.37 E-value=5.6 Score=36.13 Aligned_cols=43 Identities=21% Similarity=0.080 Sum_probs=31.3
Q ss_pred CCcEEeccccCHHH---hhCccCcceeeec----cChhHHHHHHHcCCcccC
Q 040467 343 GQGLVVQKWAPQVE---ILSHKSISAFLSH----CGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 343 ~~~v~~~~~~pq~~---lL~~~~~~~~v~H----GG~~s~~eal~~GvP~l~ 387 (387)
..+|.+.+++|+.+ ++..+++ ||.- |=.+++.||+++|+|+|+
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~ 343 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT 343 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE
Confidence 45788899998765 5666665 6642 223478999999999984
No 81
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=75.92 E-value=4.4 Score=32.91 Aligned_cols=45 Identities=20% Similarity=0.144 Sum_probs=37.8
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
++.||++...++.+-+. ...+.++|++ +| +|.++.++.-...+..
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~-~g-~V~vv~T~~A~~fv~~ 62 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTE-WA-EVRAVVTKSSLHFLDK 62 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHT-TS-EEEEEECTGGGGTCCG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhc-CC-CEEEEEcchHHHhcCH
Confidence 35689999999988776 8999999999 99 9999998877666655
No 82
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=75.44 E-value=3.9 Score=32.35 Aligned_cols=43 Identities=7% Similarity=0.135 Sum_probs=35.8
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
||++.-.|+.+=+ -...+.++|++ +|++|.++.++.-...+..
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~fi~~ 46 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQ-HFDEVNILFSPSSKNFINT 46 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTT-TSSCEEEEECGGGGGTSCG
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEchhHHHHHHH
Confidence 5888888887766 67899999999 9999999998876665554
No 83
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=73.98 E-value=2.2 Score=32.50 Aligned_cols=35 Identities=14% Similarity=0.271 Sum_probs=27.2
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|++.||+++-.+-.| ..+++.|.+ .||+|+++...
T Consensus 1 ~~~~~vlI~G~G~vG-----~~la~~L~~-~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGHSILA-----INTILQLNQ-RGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECCSHHH-----HHHHHHHHH-TTCCEEEEECC
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHH-CCCCEEEEECC
Confidence 446689998554333 789999999 99999999763
No 84
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=72.33 E-value=6 Score=34.35 Aligned_cols=45 Identities=11% Similarity=0.148 Sum_probs=35.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLRE 63 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~ 63 (387)
+|+++-.|+.|- .+|..|++ .||+|+++.... .+.+.+ .++....
T Consensus 4 kI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~-----~g~~~~~ 48 (312)
T 3hn2_A 4 RIAIVGAGALGL-----YYGALLQR-SGEDVHFLLRRD-YEAIAG-----NGLKVFS 48 (312)
T ss_dssp CEEEECCSTTHH-----HHHHHHHH-TSCCEEEECSTT-HHHHHH-----TCEEEEE
T ss_pred EEEEECcCHHHH-----HHHHHHHH-CCCeEEEEEcCc-HHHHHh-----CCCEEEc
Confidence 599999999984 47899999 999999998655 466666 5555544
No 85
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=71.95 E-value=12 Score=34.30 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=25.0
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|||+ +|+++-. |. -.+.+++++++ .|++|.++...
T Consensus 4 m~~~--kiLI~g~---g~--~a~~i~~aa~~-~G~~~v~v~~~ 38 (446)
T 3ouz_A 4 MEIK--SILIANR---GE--IALRALRTIKE-MGKKAICVYSE 38 (446)
T ss_dssp TCCC--EEEECCC---HH--HHHHHHHHHHH-TTCEEEEEEEG
T ss_pred cccc--eEEEECC---CH--HHHHHHHHHHH-cCCEEEEEEcC
Confidence 4544 6777532 32 46789999999 99999988643
No 86
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=71.40 E-value=6.3 Score=29.68 Aligned_cols=47 Identities=11% Similarity=0.111 Sum_probs=36.1
Q ss_pred cEEEEEcC-C-CcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcC
Q 040467 6 ENIVMFPL-M-AQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSL 53 (387)
Q Consensus 6 ~~il~~~~-~-~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~ 53 (387)
|+++++-. | .--.+--.+-++..|.+ +||+|++++++.....++-..
T Consensus 7 m~~LilLGCPE~Pvq~p~~lYl~~~Lk~-~G~~v~VA~npAAlkLlevaD 55 (157)
T 1kjn_A 7 GKALMVLGCPESPVQIPLAIYTSHKLKK-KGFRVTVTANPAALRLVQVAD 55 (157)
T ss_dssp CEEEEECCCSCSTTHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHHHHHS
T ss_pred eeeeEEecCCCCcchhhHHHHHHHHHHh-cCCeeEEecCHHHHhheeccC
Confidence 44555543 3 44566668999999999 999999999998888887744
No 87
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=70.48 E-value=6.1 Score=31.99 Aligned_cols=48 Identities=13% Similarity=0.032 Sum_probs=36.6
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
+++.||++...++.+=+. ...+.++|++.+|++|.++.++.....+..
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~~ 64 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYSP 64 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSCG
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhCH
Confidence 456789999999987665 589999997625999999998877766655
No 88
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=70.38 E-value=36 Score=30.22 Aligned_cols=35 Identities=6% Similarity=-0.040 Sum_probs=26.4
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
++++|+++..+ ..-..+++++++ +|++|..+....
T Consensus 10 ~~~~ili~g~g-----~~~~~~~~a~~~-~G~~v~~~~~~~ 44 (391)
T 1kjq_A 10 AATRVMLLGSG-----ELGKEVAIECQR-LGVEVIAVDRYA 44 (391)
T ss_dssp TCCEEEEESCS-----HHHHHHHHHHHT-TTCEEEEEESST
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHH-cCCEEEEEECCC
Confidence 45689998553 235778999999 999998887543
No 89
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=70.32 E-value=6.3 Score=29.78 Aligned_cols=48 Identities=13% Similarity=0.110 Sum_probs=34.3
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
|++|. .+++..+..-.+.+.+.+|...++ .|++|+++.+-.-...+.+
T Consensus 6 m~~kl-~II~~sg~~d~~~~a~~lA~~Aaa-~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 6 KKKKL-SIIVFSGTIDKLMPVGILTSGAAA-SGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp -CCEE-EEEECCCSHHHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHTBH
T ss_pred ccCCE-EEEEEcCCHHHHHHHHHHHHHHHH-cCCcEEEEEehHHHHHHhc
Confidence 34444 455555667889999999999999 9999999987554444443
No 90
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=69.70 E-value=3.3 Score=36.64 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=30.3
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC-cchhhhhh
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP-SNLKKLKS 51 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~-~~~~~~~~ 51 (387)
||++++|+++-.+..|. .+|..|++ .||+|+++... +..+.+.+
T Consensus 1 mm~~mki~iiG~G~~G~-----~~a~~L~~-~g~~V~~~~r~~~~~~~~~~ 45 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGH-----AFAAYLAL-KGQSVLAWDIDAQRIKEIQD 45 (359)
T ss_dssp ---CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSCHHHHHHHHH
T ss_pred CCCcCeEEEECCCHHHH-----HHHHHHHh-CCCEEEEEeCCHHHHHHHHh
Confidence 44567999998887774 47889999 99999988642 23334444
No 91
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=69.34 E-value=19 Score=30.35 Aligned_cols=41 Identities=15% Similarity=0.078 Sum_probs=31.7
Q ss_pred hHHHHHHHHhhhhccCCCCCeEEEeCCCch------hhHHHHHHhCCceEEEcc
Q 040467 99 KPHFRKLINGLIDEQNGHKPVCIIADMFFA------WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 99 ~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~------~~~~~a~~lgiP~v~~~~ 146 (387)
...+.+++++. +||+|++-..+. .+..+|++||+|.+....
T Consensus 101 a~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 147 (264)
T 1o97_C 101 GRILTEVIKKE-------APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVA 147 (264)
T ss_dssp HHHHHHHHHHH-------CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceE
Confidence 34556677777 899999877663 678999999999998643
No 92
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=69.24 E-value=5.1 Score=31.00 Aligned_cols=38 Identities=13% Similarity=0.275 Sum_probs=35.0
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++.+|++.+.+.-.|-....-++..|.. .|++|.++..
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~-~G~eVi~lG~ 54 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRD-AGFEVVYTGL 54 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHH-TTCEEECCCS
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCC
Confidence 4679999999999999999999999999 9999998864
No 93
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=68.53 E-value=19 Score=29.29 Aligned_cols=108 Identities=17% Similarity=0.196 Sum_probs=60.7
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC-Cc-c--hhhhhhcCCCCCCeeEEeccCCCCCCCCCCC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT-PS-N--LKKLKSSLPQNSSIHLREIPFDGIAHDLPPC 76 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~-~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 76 (387)
|..+++||+++.++.-+.+.-+ .++..+-.+++|..+.+ .. . .++.++ .++.+..++.. .++.
T Consensus 1 ~~~~~~riavl~SG~Gsnl~al---l~~~~~~~~~eI~~Vis~~~~a~~~~~A~~-----~gIp~~~~~~~----~~~~- 67 (215)
T 3tqr_A 1 MNREPLPIVVLISGNGTNLQAI---IGAIQKGLAIEIRAVISNRADAYGLKRAQQ-----ADIPTHIIPHE----EFPS- 67 (215)
T ss_dssp ---CCEEEEEEESSCCHHHHHH---HHHHHTTCSEEEEEEEESCTTCHHHHHHHH-----TTCCEEECCGG----GSSS-
T ss_pred CCCCCcEEEEEEeCCcHHHHHH---HHHHHcCCCCEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCcc----ccCc-
Confidence 5566889999998875554444 44444302578886654 22 2 224455 67777766421 1100
Q ss_pred CCCCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 77 TENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
+ ....+.+.+.++++ ++|+||+=.+.. ....+-+.....++-+.+
T Consensus 68 -------------r-----~~~d~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 68 -------------R-----TDFESTLQKTIDHY-------DPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp -------------H-----HHHHHHHHHHHHTT-------CCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -------------h-----hHhHHHHHHHHHhc-------CCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 0 11233456677777 899999866543 555666677666776643
No 94
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=68.40 E-value=19 Score=29.86 Aligned_cols=33 Identities=6% Similarity=0.056 Sum_probs=20.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
-++|.++|--= ..-+=..-..+++ +|++|++++
T Consensus 6 vL~v~aHPDDe-~l~~Ggtia~~~~-~G~~V~vv~ 38 (242)
T 2ixd_A 6 ILAFGAHADDV-EIGMAGTIAKYTK-QGYEVGICD 38 (242)
T ss_dssp EEEEESSTTHH-HHHHHHHHHHHHH-TTCCEEEEE
T ss_pred EEEEEeCCChH-HHhHHHHHHHHHH-CCCeEEEEE
Confidence 35566666421 2233344466778 999999886
No 95
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=67.99 E-value=23 Score=29.63 Aligned_cols=40 Identities=18% Similarity=0.044 Sum_probs=30.2
Q ss_pred HHHHHHHHhhhhccCCCCCeEEEeCCCch------hhHHHHHHhCCceEEEcc
Q 040467 100 PHFRKLINGLIDEQNGHKPVCIIADMFFA------WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 100 ~~~~~ll~~~~~~~~~~~pD~vV~D~~~~------~~~~~a~~lgiP~v~~~~ 146 (387)
..+.+++++. +||+|++-..+. .+..+|+++|+|.+....
T Consensus 103 ~~La~~i~~~-------~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~ 148 (252)
T 1efp_B 103 KILAAVARAE-------GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFAS 148 (252)
T ss_dssp HHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHhc-------CCCEEEEcCCccCCchhhHHHHHHHHhCCCccccEE
Confidence 3455566665 799999877663 678999999999998643
No 96
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=66.74 E-value=54 Score=28.41 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=25.4
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.+||+|+..|..+- ..-++|.+ +||+|..+.+..
T Consensus 4 mmrIvf~Gtp~fa~-----~~L~~L~~-~~~~v~~Vvt~p 37 (317)
T 3rfo_A 4 MIKVVFMGTPDFSV-----PVLRRLIE-DGYDVIGVVTQP 37 (317)
T ss_dssp TSEEEEECCSTTHH-----HHHHHHHH-TTCEEEEEECCC
T ss_pred ceEEEEEeCCHHHH-----HHHHHHHH-CCCcEEEEEeCC
Confidence 35799999987653 45678889 999998776543
No 97
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=66.71 E-value=28 Score=30.18 Aligned_cols=33 Identities=12% Similarity=-0.118 Sum_probs=24.4
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+++||+|+..+..+ ....++|.+ .||+|..+.+
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~-~~~~i~~Vvt 34 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLS-SGHNVVGVFT 34 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHH-TTCEEEEEEC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHH-CCCcEEEEEe
Confidence 46789999887543 455578888 8999986654
No 98
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=66.50 E-value=8 Score=31.31 Aligned_cols=39 Identities=21% Similarity=0.179 Sum_probs=35.5
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+.+|++.+.+...|-....-++..|.. +|++|.++....
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~-~G~~v~~LG~~v 126 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLES-GGFTVYNLGVDI 126 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHH-TTCEEEECCSSB
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHH-CCCEEEECCCCC
Confidence 568999999999999999999999999 999999987543
No 99
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=66.48 E-value=31 Score=31.58 Aligned_cols=41 Identities=17% Similarity=0.229 Sum_probs=35.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLK 47 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~ 47 (387)
..|+++..++.|-..-...||..|++ +|++|.++....++.
T Consensus 101 ~vIlivG~~G~GKTTt~~kLA~~l~~-~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 101 TILLMVGIQGSGKTTTVAKLARYFQK-RGYKVGVVCSDTWRP 141 (443)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHT-TTCCEEEEECCCSST
T ss_pred eEEEEECcCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCCcch
Confidence 35677777899999999999999999 999999999777654
No 100
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=65.63 E-value=35 Score=27.64 Aligned_cols=102 Identities=11% Similarity=0.096 Sum_probs=58.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCc--EEEEEe-CCcc---hhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRY--TITFVN-TPSN---LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh--~Vt~~~-~~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 79 (387)
+||+|+.++.-+ -+.++.++|.+ .+| +|..+. .++. .++.++ .++.+..+... .+.
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~-~~~~~~i~~Vvs~~~~~~~~~~A~~-----~gIp~~~~~~~----~~~----- 63 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIES-GKVNASIELVISDNPKAYAIERCKK-----HNVECKVIQRK----EFP----- 63 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHT-TSSCEEEEEEEESCTTCHHHHHHHH-----HTCCEEECCGG----GSS-----
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHh-CCCCCeEEEEEeCCCChHHHHHHHH-----cCCCEEEeCcc----ccc-----
Confidence 369999777643 36677788888 887 766544 4322 233444 56666654311 000
Q ss_pred CCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
+ -+...+.+.+.+++. ++|+||+=.+.. ....+-+.....++-+.+
T Consensus 64 -------~-------r~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 64 -------S-------KKEFEERMALELKKK-------GVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp -------S-------HHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred -------c-------hhhhhHHHHHHHHhc-------CCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 0 012233455667777 899998765533 455555566556666643
No 101
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=65.22 E-value=11 Score=34.70 Aligned_cols=43 Identities=14% Similarity=0.071 Sum_probs=36.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLK 50 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~ 50 (387)
-+++..-|+.|-..-.+.+|...+. +|..|.+++.+...+.+.
T Consensus 199 liiIaG~pG~GKTtlal~ia~~~a~-~g~~vl~fSlEms~~ql~ 241 (444)
T 3bgw_A 199 FVLIAARPSMGKTAFALKQAKNMSD-NDDVVNLHSLEMGKKENI 241 (444)
T ss_dssp EEEEEECSSSSHHHHHHHHHHHHHH-TTCEEEEECSSSCTTHHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHH-cCCEEEEEECCCCHHHHH
Confidence 4778888999999999999999999 999999999876554443
No 102
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=65.20 E-value=5.3 Score=35.13 Aligned_cols=41 Identities=20% Similarity=0.179 Sum_probs=32.4
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
.+||+++-.|+.|- .+|..|++ .||+|+++......+.+.+
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~-~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLAL-AGEAINVLARGATLQALQT 43 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHH-TTCCEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHH-CCCEEEEEEChHHHHHHHH
Confidence 45799999988884 57899999 9999999986544455555
No 103
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=64.84 E-value=9.8 Score=30.74 Aligned_cols=48 Identities=15% Similarity=0.043 Sum_probs=34.3
Q ss_pred hhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEE
Q 040467 265 ELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWV 312 (387)
Q Consensus 265 ~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~ 312 (387)
+-+.+|+.+...+.++||..+|......+.++.+.++|+++|..+.+.
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 334556644444679999988765455677888999999999986653
No 104
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=64.66 E-value=12 Score=27.84 Aligned_cols=34 Identities=15% Similarity=-0.006 Sum_probs=25.7
Q ss_pred CcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhh
Q 040467 15 AQGHTIPFLALALHLENTNRYTITFVNTPSNLKKL 49 (387)
Q Consensus 15 ~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~ 49 (387)
........+.+|...++ .||+|+++..-+-...+
T Consensus 28 ~~~~~~~al~lA~~A~a-~g~eV~vFf~~dGV~~l 61 (134)
T 3mc3_A 28 DLDRTYAPLFMASISAS-MEYETSVFFMIXGPXLL 61 (134)
T ss_dssp GTHHHHHHHHHHHHHHH-TTCEEEEEECTTGGGGG
T ss_pred CHHHHHHHHHHHHHHHH-CCCCEEEEEEeCcHHHH
Confidence 45677788889999999 99999988765443333
No 105
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=64.46 E-value=13 Score=30.24 Aligned_cols=104 Identities=8% Similarity=0.017 Sum_probs=56.9
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcch---hhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNL---KKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 80 (387)
.++||+++.++.-+.+..++ +++.+..+++|..+.+.... ++.++ .++.+..++.. ..
T Consensus 11 ~~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~a~~~~~A~~-----~gIp~~~~~~~----~~------- 71 (215)
T 3da8_A 11 APARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRECRAAEIAAE-----ASVPVFTVRLA----DH------- 71 (215)
T ss_dssp SSEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSCCHHHHHHHH-----TTCCEEECCGG----GS-------
T ss_pred CCcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCchHHHHHHHH-----cCCCEEEeCcc----cc-------
Confidence 35689999988855444444 33322145688766543222 23445 66677655311 00
Q ss_pred CCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCc-hhhHHHHHHhCCceEEEc
Q 040467 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFV 145 (387)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~-~~~~~~a~~lgiP~v~~~ 145 (387)
. +. ....+.+.+.++++ ++|+||+=.+. .....+-+...-.++-+.
T Consensus 72 ---~--~r-------~~~d~~~~~~l~~~-------~~Dlivlagy~~iL~~~~l~~~~~~~iNiH 118 (215)
T 3da8_A 72 ---P--SR-------DAWDVAITAATAAH-------EPDLVVSAGFMRILGPQFLSRFYGRTLNTH 118 (215)
T ss_dssp ---S--SH-------HHHHHHHHHHHHTT-------CCSEEEEEECCSCCCHHHHHHHTTTEEEEE
T ss_pred ---c--ch-------hhhhHHHHHHHHhh-------CCCEEEEcCchhhCCHHHHhhccCCeEEeC
Confidence 0 00 11234456677777 89998865543 355566666665666654
No 106
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=64.29 E-value=7 Score=34.04 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=31.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
++|+++-.|+.|- .+|..|++ .||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~-~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAK-TGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHH-TTCEEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHh-CCCeEEEEeCCh-HHHHHh
Confidence 4699999998884 57899999 999999998655 466666
No 107
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=63.74 E-value=12 Score=34.36 Aligned_cols=44 Identities=14% Similarity=0.026 Sum_probs=35.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLK 50 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~ 50 (387)
-+++..-|+.|-..-.+.+|...+...|..|.+++.+.....+.
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~~l~ 245 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAAQLT 245 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHH
Confidence 47778889999999999999988861489999999876655443
No 108
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=63.53 E-value=8.1 Score=30.76 Aligned_cols=43 Identities=21% Similarity=0.157 Sum_probs=37.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
||++.-.|+.|-+ =...+.++|++ +|++|.++.++.-...+..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~-~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEE-LDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHH-TTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHH-CCCEEEEEEChhHHHHhhH
Confidence 7999999998865 57899999999 9999999998887777766
No 109
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=62.50 E-value=22 Score=31.30 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=33.1
Q ss_pred cEEEEEcC-CCcccHHHHHHHHHHHH--hCCCcEEEEEeCCcc
Q 040467 6 ENIVMFPL-MAQGHTIPFLALALHLE--NTNRYTITFVNTPSN 45 (387)
Q Consensus 6 ~~il~~~~-~~~GH~~P~l~la~~L~--~~rGh~Vt~~~~~~~ 45 (387)
.+|++++. |+.|-..-..++|..|+ + +|++|.++.....
T Consensus 18 ~~i~~~~gkGGvGKTt~a~~lA~~la~~~-~g~~vllid~D~~ 59 (348)
T 3io3_A 18 LKWIFVGGKGGVGKTTTSSSVAVQLALAQ-PNEQFLLISTDPA 59 (348)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHHC-TTSCEEEEECCSS
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHhc-CCCeEEEEECCCC
Confidence 45666655 78899999999999999 8 9999999987654
No 110
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=62.34 E-value=61 Score=26.23 Aligned_cols=101 Identities=11% Similarity=0.037 Sum_probs=59.8
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeC-C-cc--hhhhhhcCCCCCCeeEEeccCCCCCCCCCC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNT-P-SN--LKKLKSSLPQNSSIHLREIPFDGIAHDLPP 75 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~-~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 75 (387)
|.++.||+++.++.-+- +.+|.+++.+ . +++|..+.+ . .. .++.++ .++.+..++.. .+
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~-~~~~~~I~~Vis~~~~a~~l~~A~~-----~gIp~~~~~~~----~~-- 69 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFST-EESSVVISCVISNNAEARGLLIAQS-----YGIPTFVVKRK----PL-- 69 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCC-C-CSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCBT----TB--
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHc-CCCCcEEEEEEeCCcchHHHHHHHH-----cCCCEEEeCcc----cC--
Confidence 45577999998887443 4555666655 4 378886654 2 22 223445 66777765421 00
Q ss_pred CCCCCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 76 CTENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
. .+.+.+.+++. +||+||+-.+.. ....+-+...-.++-+.+
T Consensus 70 -------------~---------~~~~~~~L~~~-------~~Dlivlagy~~IL~~~~l~~~~~~~iNiHp 112 (215)
T 3kcq_A 70 -------------D---------IEHISTVLREH-------DVDLVCLAGFMSILPEKFVTDWHHKIINIHP 112 (215)
T ss_dssp -------------C---------HHHHHHHHHHT-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -------------C---------hHHHHHHHHHh-------CCCEEEEeCCceEeCHHHHhhccCCeEEECc
Confidence 0 04455667777 899998766543 556666677666676643
No 111
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=61.85 E-value=11 Score=31.74 Aligned_cols=38 Identities=18% Similarity=0.157 Sum_probs=35.0
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++.+|++.+.+.-.|-....-++..|.. +|++|.++..
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~-~G~~Vi~LG~ 159 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRA-NGYNVVDLGR 159 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHH-TTCEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHH-CCCEEEECCC
Confidence 3678999999999999999999999999 9999998863
No 112
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=61.74 E-value=4.1 Score=35.98 Aligned_cols=44 Identities=11% Similarity=0.116 Sum_probs=30.8
Q ss_pred CCcEEeccccCHHHhhC---ccCcceeeeccCh---------hHHHHHHHcCCcccC
Q 040467 343 GQGLVVQKWAPQVEILS---HKSISAFLSHCGW---------NSVLEALSHRVPIIG 387 (387)
Q Consensus 343 ~~~v~~~~~~pq~~lL~---~~~~~~~v~HGG~---------~s~~eal~~GvP~l~ 387 (387)
+ ||.+.+|+|+.++.. .++.+++.+-+.. +-+.|++++|+|+|+
T Consensus 214 ~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~ 269 (339)
T 3rhz_A 214 Q-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIV 269 (339)
T ss_dssp T-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEE
T ss_pred C-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEE
Confidence 5 899999999988643 4445334323322 357899999999984
No 113
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=61.53 E-value=12 Score=30.74 Aligned_cols=39 Identities=10% Similarity=0.006 Sum_probs=35.2
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+.+|++..-|+.|-..-++++|.+|++ +|++|.++..+.
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~-~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLR-QGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 678999999999999999999999999 999998887554
No 114
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=61.19 E-value=20 Score=28.95 Aligned_cols=105 Identities=15% Similarity=0.108 Sum_probs=60.6
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeC-C-cc--hhhhhhcCCCCCCeeEEeccCCCCCCCCCCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNT-P-SN--LKKLKSSLPQNSSIHLREIPFDGIAHDLPPC 76 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~-~-~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 76 (387)
|.|.||+++.++.-+- +.+|.+++.+ . .++|..+.+ . .. .++.++ .++.+..++.. .+..
T Consensus 5 m~~~ri~vl~SG~gsn---l~all~~~~~-~~l~~~I~~Visn~~~a~~l~~A~~-----~gIp~~~~~~~----~~~~- 70 (209)
T 4ds3_A 5 MKRNRVVIFISGGGSN---MEALIRAAQA-PGFPAEIVAVFSDKAEAGGLAKAEA-----AGIATQVFKRK----DFAS- 70 (209)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHHTS-TTCSEEEEEEEESCTTCTHHHHHHH-----TTCCEEECCGG----GSSS-
T ss_pred CCCccEEEEEECCcHH---HHHHHHHHHc-CCCCcEEEEEEECCcccHHHHHHHH-----cCCCEEEeCcc----ccCC-
Confidence 4577999998887444 4555566655 4 378886654 2 22 224445 66777765421 1100
Q ss_pred CCCCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 77 TENSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
. ....+.+.+.+++. +||+||+=.+.. ....+-+...-.++-+.+
T Consensus 71 ------------r------~~~d~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 116 (209)
T 4ds3_A 71 ------------K------EAHEDAILAALDVL-------KPDIICLAGYMRLLSGRFIAPYEGRILNIHP 116 (209)
T ss_dssp ------------H------HHHHHHHHHHHHHH-------CCSEEEESSCCSCCCHHHHGGGTTCEEEEES
T ss_pred ------------H------HHHHHHHHHHHHhc-------CCCEEEEeccccCcCHHHHhhccCCeEEECC
Confidence 0 12234566777777 899998766543 555666666666666643
No 115
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=61.18 E-value=7.6 Score=33.76 Aligned_cols=93 Identities=14% Similarity=0.052 Sum_probs=56.0
Q ss_pred CeeEEEecCCCc---CCCHHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccC
Q 040467 277 NSVIYVSFGSQN---TIAASQMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAP 353 (387)
Q Consensus 277 ~~~v~vs~GS~~---~~~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 353 (387)
++.|.+.-|+.. ..+.+.+.++++.+.+.++++++..+.+. + ....+++...-+++.+.+-.+
T Consensus 178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e--------~~~~~~i~~~~~~~~l~g~~s 243 (326)
T 2gt1_A 178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------E--------EERAKRLAEGFAYVEVLPKMS 243 (326)
T ss_dssp TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------H--------HHHHHHHHTTCTTEEECCCCC
T ss_pred CCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------H--------HHHHHHHHhhCCcccccCCCC
Confidence 557888888753 36788888998888777888776544331 0 111122211112333333322
Q ss_pred ---HHHhhCccCcceeeec-cChhHHHHHHHcCCcccC
Q 040467 354 ---QVEILSHKSISAFLSH-CGWNSVLEALSHRVPIIG 387 (387)
Q Consensus 354 ---q~~lL~~~~~~~~v~H-GG~~s~~eal~~GvP~l~ 387 (387)
-.+++.+++ ++|+. .|. ++=|.+.|+|+|+
T Consensus 244 l~el~ali~~a~--l~I~~DSG~--~HlAaa~g~P~v~ 277 (326)
T 2gt1_A 244 LEGVARVLAGAK--FVVSVDTGL--SHLTAALDRPNIT 277 (326)
T ss_dssp HHHHHHHHHTCS--EEEEESSHH--HHHHHHTTCCEEE
T ss_pred HHHHHHHHHhCC--EEEecCCcH--HHHHHHcCCCEEE
Confidence 345888855 59998 544 4447779999974
No 116
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=60.86 E-value=64 Score=25.99 Aligned_cols=101 Identities=9% Similarity=0.097 Sum_probs=59.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeCC-cc---hhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNTP-SN---LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~~-~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 80 (387)
||+++.++.-+ -+.++.++|.+ . +|+|..+.+. .. ..+.++ .++.+..+... .+.
T Consensus 5 ki~vl~sG~g~---~~~~~l~~l~~-~~l~~~I~~Vit~~~~~~v~~~A~~-----~gIp~~~~~~~----~~~------ 65 (212)
T 3av3_A 5 RLAVFASGSGT---NFQAIVDAAKR-GDLPARVALLVCDRPGAKVIERAAR-----ENVPAFVFSPK----DYP------ 65 (212)
T ss_dssp EEEEECCSSCH---HHHHHHHHHHT-TCCCEEEEEEEESSTTCHHHHHHHH-----TTCCEEECCGG----GSS------
T ss_pred EEEEEEECCcH---HHHHHHHHHHh-CCCCCeEEEEEeCCCCcHHHHHHHH-----cCCCEEEeCcc----ccc------
Confidence 68887777643 36667778887 6 7999766543 22 233444 56666654311 100
Q ss_pred CCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
+ . +...+.+.+.+++. +||+||+=.+.. ....+-+.....++-+.+
T Consensus 66 ------~-~------~~~~~~~~~~l~~~-------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 66 ------S-K------AAFESEILRELKGR-------QIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp ------S-H------HHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred ------c-h------hhhHHHHHHHHHhc-------CCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 0 0 12233455667777 899998766533 555666677666776643
No 117
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=60.42 E-value=5.6 Score=34.63 Aligned_cols=37 Identities=16% Similarity=0.259 Sum_probs=28.9
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|||++.+|+++-.+..| +..|..|++ +|++|+++-..
T Consensus 1 m~~~~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~~ 37 (335)
T 2zbw_A 1 MAADHTDVLIVGAGPTG-----LFAGFYVGM-RGLSFRFVDPL 37 (335)
T ss_dssp --CCEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESS
T ss_pred CCCCcCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEeCC
Confidence 67777889999888665 678889999 99999999643
No 118
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=59.18 E-value=20 Score=29.86 Aligned_cols=37 Identities=11% Similarity=0.060 Sum_probs=27.2
Q ss_pred cEEEEEcCCCc----------cc-HHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQ----------GH-TIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~----------GH-~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
.||+++..... |- ..=++.--..|++ .|++|+++++.
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~-aG~~V~~aSp~ 57 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTA-AGFEVDVASET 57 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 46777766632 22 4447777899999 99999999864
No 119
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=59.06 E-value=69 Score=25.80 Aligned_cols=101 Identities=14% Similarity=0.121 Sum_probs=59.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeCC-cc---hhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNTP-SN---LKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENS 80 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~~-~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 80 (387)
||+++.++..+ .+.+|.+++.+ . +|+|..+.+. +. .++.++ .++.+..++.. .+.
T Consensus 2 ri~vl~Sg~gs---nl~ali~~~~~-~~~~~~i~~Vis~~~~~~~~~~A~~-----~gIp~~~~~~~----~~~------ 62 (212)
T 1jkx_A 2 NIVVLISGNGS---NLQAIIDACKT-NKIKGTVRAVFSNKADAFGLERARQ-----AGIATHTLIAS----AFD------ 62 (212)
T ss_dssp EEEEEESSCCH---HHHHHHHHHHT-TSSSSEEEEEEESCTTCHHHHHHHH-----TTCEEEECCGG----GCS------
T ss_pred EEEEEEECCcH---HHHHHHHHHHc-CCCCceEEEEEeCCCchHHHHHHHH-----cCCcEEEeCcc----ccc------
Confidence 68888888754 36677777776 4 6888766533 22 233445 67777765311 110
Q ss_pred CCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 81 DSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
+ . +...+.+.+.++++ +||+||+=.+.. ....+-+.....++-+.+
T Consensus 63 ------~-r------~~~~~~~~~~l~~~-------~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 109 (212)
T 1jkx_A 63 ------S-R------EAYDRELIHEIDMY-------APDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109 (212)
T ss_dssp ------S-H------HHHHHHHHHHHGGG-------CCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred ------c-h------hhccHHHHHHHHhc-------CCCEEEEeChhhhCCHHHHhhccCCEEEEcc
Confidence 0 0 12233455667777 899999776543 555666677667776643
No 120
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=58.93 E-value=8.5 Score=33.98 Aligned_cols=35 Identities=23% Similarity=0.394 Sum_probs=29.6
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||....+|+++-.+..| +.+|.+|++ +|++|+++-
T Consensus 2 ~m~~~~dVvVIG~Gi~G-----ls~A~~La~-~G~~V~vle 36 (363)
T 1c0p_A 2 MMHSQKRVVVLGSGVIG-----LSSALILAR-KGYSVHILA 36 (363)
T ss_dssp CCCCSCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEE
T ss_pred CCCCCCCEEEECCCHHH-----HHHHHHHHh-CCCEEEEEe
Confidence 45556789999999777 678999999 999999995
No 121
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=57.73 E-value=50 Score=28.56 Aligned_cols=32 Identities=16% Similarity=-0.044 Sum_probs=24.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+||+|+..|..+- ..-++|.+ .||+|..+.+.
T Consensus 3 mrivf~Gtp~fa~-----~~L~~L~~-~~~~v~~Vvt~ 34 (314)
T 3tqq_A 3 LKIVFAGTPQFAV-----PTLRALID-SSHRVLAVYTQ 34 (314)
T ss_dssp CEEEEEECSGGGH-----HHHHHHHH-SSSEEEEEECC
T ss_pred cEEEEECCCHHHH-----HHHHHHHH-CCCeEEEEEeC
Confidence 5799999987653 44678889 99999877653
No 122
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=57.68 E-value=6.3 Score=35.06 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=29.8
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
||....+|+++-.+..| +.+|..|++ +|++|+++--
T Consensus 1 Mm~~~~dVvIIGgGi~G-----l~~A~~La~-~G~~V~lle~ 36 (382)
T 1y56_B 1 MLPEKSEIVVIGGGIVG-----VTIAHELAK-RGEEVTVIEK 36 (382)
T ss_dssp -CCSBCSEEEECCSHHH-----HHHHHHHHH-TTCCEEEECS
T ss_pred CCCCcCCEEEECCCHHH-----HHHHHHHHH-CCCeEEEEeC
Confidence 56556789999998777 788999999 9999999953
No 123
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=57.26 E-value=4.9 Score=34.81 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=27.5
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCC-----C-cEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTN-----R-YTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~r-----G-h~Vt~~~~ 42 (387)
..+++|.|+-.|..|. .+|..|++ + | |+|+++..
T Consensus 6 ~~~m~I~iiG~G~mG~-----~~a~~L~~-~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGLGGVGG-----YYGAMLAL-RAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECCSHHHH-----HHHHHHHH-HHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECcCHHHH-----HHHHHHHh-CccccCCCCCEEEEEc
Confidence 3457899999888884 56888888 8 9 99999976
No 124
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=57.11 E-value=68 Score=26.10 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=31.6
Q ss_pred EEEEEcCC-CcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 7 NIVMFPLM-AQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 7 ~il~~~~~-~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
.+.+++.+ +.|-..-++.++..+.. +|..|.++.+...
T Consensus 13 ~i~litG~mGsGKTT~ll~~~~r~~~-~g~kVli~~~~~d 51 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRRLHRLEY-ADVKYLVFKPKID 51 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHHH-TTCCEEEEEECCC
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHh-cCCEEEEEEeccC
Confidence 46666665 99999999999999999 9999999875543
No 125
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=56.88 E-value=44 Score=27.08 Aligned_cols=106 Identities=12% Similarity=0.100 Sum_probs=59.6
Q ss_pred EEEEEcCCCcccHHH----HHHHHHHHHhCCCcEEEEEe-CCc---chhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCC
Q 040467 7 NIVMFPLMAQGHTIP----FLALALHLENTNRYTITFVN-TPS---NLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTE 78 (387)
Q Consensus 7 ~il~~~~~~~GH~~P----~l~la~~L~~~rGh~Vt~~~-~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 78 (387)
.|+++.---.|.++| ++..|++|++..|-+|+.++ .+. ..+...+.|+ ..+-...-+ .+..
T Consensus 5 ~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~Ga--d~v~~v~~~------~~~~--- 73 (217)
T 3ih5_A 5 NLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPYGV--DKLHVFDAE------GLYP--- 73 (217)
T ss_dssp CEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGGTC--SEEEEEECG------GGSS---
T ss_pred cEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCC--CEEEEecCc------cccc---
Confidence 377776655565554 57888888863476777654 222 2233334443 222222111 0000
Q ss_pred CCCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch---hhHHHHHHhCCceEEE
Q 040467 79 NSDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA---WSAEIAQEYGIFNALF 144 (387)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~---~~~~~a~~lgiP~v~~ 144 (387)
. . .......+.+++++. +||+|++-.... .+..+|.++++|.+.-
T Consensus 74 ----~---~-------~~~~a~~l~~~i~~~-------~p~~Vl~g~t~~G~~laprlAa~L~~~~~sd 121 (217)
T 3ih5_A 74 ----Y---T-------SLPHTSILVNLFKEE-------QPQICLMGATVIGRDLGPRVSSALTSGLTAD 121 (217)
T ss_dssp ----C---C-------HHHHHHHHHHHHHHH-------CCSEEEEECSHHHHHHHHHHHHHTTCCCBCS
T ss_pred ----C---C-------HHHHHHHHHHHHHhc-------CCCEEEEeCCcchhhHHHHHHHHhCCCccce
Confidence 0 0 023344566677777 899999887555 3457888999998764
No 126
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=56.58 E-value=16 Score=29.66 Aligned_cols=38 Identities=16% Similarity=0.125 Sum_probs=34.9
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++.+|++.+.+.-.|-....=++..|.. +|++|..+..
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~-~G~~Vi~LG~ 128 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGA-NGFQIVDLGV 128 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHH-TSCEEEECCS
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHH-CCCeEEEcCC
Confidence 3579999999999999999999999999 9999999975
No 127
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=56.13 E-value=7.2 Score=34.65 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=32.9
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC-cchhhhhh
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP-SNLKKLKS 51 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~-~~~~~~~~ 51 (387)
.+.+++|.|+-.+..|. .+|..|++ .||+|++.... +..+.+.+
T Consensus 26 ~~~~mkI~VIGaG~mG~-----alA~~La~-~G~~V~l~~r~~~~~~~i~~ 70 (356)
T 3k96_A 26 EPFKHPIAILGAGSWGT-----ALALVLAR-KGQKVRLWSYESDHVDEMQA 70 (356)
T ss_dssp -CCCSCEEEECCSHHHH-----HHHHHHHT-TTCCEEEECSCHHHHHHHHH
T ss_pred cccCCeEEEECccHHHH-----HHHHHHHH-CCCeEEEEeCCHHHHHHHHH
Confidence 34467899999998885 58999999 99999999754 33344444
No 128
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=55.78 E-value=28 Score=31.68 Aligned_cols=34 Identities=21% Similarity=0.232 Sum_probs=22.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
||||++..+++-| +||++|++ .+.--.+++.+.+
T Consensus 4 mkvlviG~ggre~-----ala~~l~~-s~~v~~v~~~pgn 37 (431)
T 3mjf_A 4 MNILIIGNGGREH-----ALGWKAAQ-SPLADKIYVAPGN 37 (431)
T ss_dssp EEEEEEECSHHHH-----HHHHHHTT-CTTEEEEEEEECC
T ss_pred cEEEEECCCHHHH-----HHHHHHHh-CCCCCEEEEECCC
Confidence 5799998887655 68999998 7653333333443
No 129
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=54.98 E-value=99 Score=26.64 Aligned_cols=45 Identities=16% Similarity=0.221 Sum_probs=29.6
Q ss_pred cEEEEEcCCCcc---c--HHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQG---H--TIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~G---H--~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
..|++.|....+ . ..-+.++++.|.+ +|++|.++..+...+..++
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~-~~~~vvl~g~~~e~~~~~~ 230 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLID-EGYQVVLFGSAKDHEAGNE 230 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHH-TTCEEEECCCGGGHHHHHH
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHH-CCCeEEEEeChhhHHHHHH
Confidence 346666544222 2 2368899999999 8999998877665544433
No 130
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=54.72 E-value=9.4 Score=32.58 Aligned_cols=32 Identities=19% Similarity=0.143 Sum_probs=23.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|||+++ |+.|-+= .+|+++|.+ +||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~-~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNA-RGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHH-CCCEEEEEEC
Confidence 457665 3444432 468999999 9999999873
No 131
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=54.39 E-value=15 Score=30.92 Aligned_cols=49 Identities=16% Similarity=0.208 Sum_probs=31.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc-chhhhhhcCCCCCCeeEEecc
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS-NLKKLKSSLPQNSSIHLREIP 65 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~-~~~~~~~~~~~~~~i~~~~~~ 65 (387)
++|+++- + |.+= ..|+++|.+ +||+|+.++-.. ....+.+ .++++....
T Consensus 6 ~~ilVtG--a-G~iG--~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D 55 (286)
T 3ius_A 6 GTLLSFG--H-GYTA--RVLSRALAP-QGWRIIGTSRNPDQMEAIRA-----SGAEPLLWP 55 (286)
T ss_dssp CEEEEET--C-CHHH--HHHHHHHGG-GTCEEEEEESCGGGHHHHHH-----TTEEEEESS
T ss_pred CcEEEEC--C-cHHH--HHHHHHHHH-CCCEEEEEEcChhhhhhHhh-----CCCeEEEec
Confidence 3577775 4 5443 478999999 999999987433 2333444 566666543
No 132
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=54.23 E-value=30 Score=29.04 Aligned_cols=39 Identities=15% Similarity=0.296 Sum_probs=30.3
Q ss_pred CeeEEEecCCCcCCCHHHHHHHHHHHHh--CCCcEEEEEcC
Q 040467 277 NSVIYVSFGSQNTIAASQMMQLAMALEA--CGKNFIWVVKP 315 (387)
Q Consensus 277 ~~~v~vs~GS~~~~~~~~~~~~~~a~~~--~~~~~l~~~~~ 315 (387)
+.+|++++||......+.+..+.+.+++ .+..+-|....
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 4599999999877666678888888876 46788888654
No 133
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=53.86 E-value=8.4 Score=34.23 Aligned_cols=35 Identities=14% Similarity=0.062 Sum_probs=27.4
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
||++++|.|+-.+..| ..+|+.|++ +||+|+++..
T Consensus 19 Mm~~mkIgiIGlG~mG-----~~~A~~L~~-~G~~V~v~dr 53 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMG-----ADMVRRLRK-GGHECVVYDL 53 (358)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECS
T ss_pred hhcCCEEEEECchHHH-----HHHHHHHHh-CCCEEEEEeC
Confidence 6677899999888777 478999999 9999998853
No 134
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=53.28 E-value=21 Score=25.26 Aligned_cols=46 Identities=15% Similarity=0.039 Sum_probs=30.1
Q ss_pred ccEEEEEcCC-CcccHHHHHHHHHHHHhCC-Cc-EEEEEeCCcchhhhhh
Q 040467 5 KENIVMFPLM-AQGHTIPFLALALHLENTN-RY-TITFVNTPSNLKKLKS 51 (387)
Q Consensus 5 ~~~il~~~~~-~~GH~~P~l~la~~L~~~r-Gh-~Vt~~~~~~~~~~~~~ 51 (387)
|.-|++...| ........+.+|..+.+ . || +|+++...+-.....+
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~-~~g~~~v~vff~~dgV~~~~~ 51 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALRE-QESNLDLRLFLMSDAVTAGLR 51 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHH-HCTTCEEEEEECGGGGGGGBS
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHh-cCCCccEEEEEEchHHHHHhc
Confidence 3434444433 23556678999999999 8 99 9998876554444433
No 135
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=52.67 E-value=13 Score=31.06 Aligned_cols=44 Identities=18% Similarity=0.148 Sum_probs=32.4
Q ss_pred CCCCccEEEEEcC--CCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 1 MAQRKENIVMFPL--MAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 1 ~~~~~~~il~~~~--~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
|+.++++++.+.. ++.|-..-...||..|++ +|++|.++=....
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D~~ 46 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLAR-LGKRVLLVDLDPQ 46 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHH-TTCCEEEEECCTT
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHH-CCCCEEEEECCCC
Confidence 4444556666654 688999999999999999 9999999965443
No 136
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=52.58 E-value=45 Score=30.65 Aligned_cols=34 Identities=9% Similarity=0.046 Sum_probs=28.2
Q ss_pred HHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEE
Q 040467 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (387)
Q Consensus 101 ~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~ 144 (387)
.+++++++. +||++|.... ...+|+++|||++.+
T Consensus 366 ~le~~i~~~-------~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 DLEHAARAG-------QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHHH-------TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHHhc-------CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 366777777 8999999865 567999999999986
No 137
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=52.04 E-value=12 Score=33.55 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=29.1
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|+|++.+|+|+-.+..| +.+|..|++ +|++|+++-
T Consensus 1 M~~~~~~V~IVGaG~aG-----l~~A~~L~~-~G~~v~v~E 35 (397)
T 2vou_A 1 MSPTTDRIAVVGGSISG-----LTAALMLRD-AGVDVDVYE 35 (397)
T ss_dssp -CCCCSEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEC
T ss_pred CCCCCCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEe
Confidence 56667899999888665 788999999 999999994
No 138
>2yrx_A Phosphoribosylglycinamide synthetase; glycinamide ribonucleotide synthetase, GAR synthetase; HET: AMP; 1.90A {Geobacillus kaustophilus} PDB: 2yrw_A* 2ys6_A* 2ys7_A
Probab=51.87 E-value=1.2e+02 Score=27.60 Aligned_cols=35 Identities=14% Similarity=0.069 Sum_probs=25.2
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++|+++..+. -+..++..|+++.|+++.++.+
T Consensus 19 ~~~~~iliiG~g~-----r~~a~a~~~~~~~g~~~v~~~~ 53 (451)
T 2yrx_A 19 QSHMNVLVIGRGG-----REHAIAWKAAQSPLVGKLYVAP 53 (451)
T ss_dssp CSSEEEEEEECSH-----HHHHHHHHHHTCTTEEEEEEEE
T ss_pred CCCCEEEEECCCH-----HHHHHHHHHHhcCCCCEEEEEC
Confidence 3467899998884 3567888886636888777754
No 139
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=51.85 E-value=1.3e+02 Score=26.94 Aligned_cols=35 Identities=11% Similarity=0.052 Sum_probs=26.0
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
+++|+++..+ ..-..+++++++ +|++|..+.....
T Consensus 19 ~~~ili~g~g-----~~g~~~~~a~~~-~G~~v~~v~~~~~ 53 (433)
T 2dwc_A 19 AQKILLLGSG-----ELGKEIAIEAQR-LGVEVVAVDRYAN 53 (433)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHH-TTCEEEEEESSTT
T ss_pred CCEEEEECCC-----HHHHHHHHHHHH-CCCEEEEEECCCC
Confidence 4579998553 245678999999 9999998875443
No 140
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=51.33 E-value=11 Score=32.74 Aligned_cols=41 Identities=10% Similarity=0.182 Sum_probs=31.8
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
+++|+++-.|+.| ..+|..|++ .||+|+++..++..+.+.+
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~-~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLAR-AGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHH-TTCEEEEECCHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHH-CCCeEEEEEcHhHHHHHHh
Confidence 4689999999888 457899999 9999999954445555655
No 141
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=50.85 E-value=10 Score=35.46 Aligned_cols=35 Identities=14% Similarity=0.398 Sum_probs=29.4
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.|.|||++-.+..| +.+|+.|++ .|++||++...+
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~-~~~~VtLId~~~ 75 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDT-KKYNVSIISPRS 75 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCT-TTCEEEEEESSS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhh-CCCcEEEECCCC
Confidence 47899999988766 578999999 999999997654
No 142
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=50.57 E-value=58 Score=28.52 Aligned_cols=45 Identities=18% Similarity=0.092 Sum_probs=31.7
Q ss_pred cEEEEEcCCCcc--c--HHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQG--H--TIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~G--H--~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
..|++.|..+.. . ..-+.++++.|.+ +|++|.++..+..++..++
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~-~g~~vvl~g~~~e~~~~~~ 234 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGR-LGYKTVFFGGPMDLEMVQP 234 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHH-HTCEEEECCCTTTHHHHHH
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHh-CCCeEEEEeCcchHHHHHH
Confidence 446666655432 2 3458999999999 9999999877776665544
No 143
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=50.57 E-value=14 Score=32.20 Aligned_cols=37 Identities=16% Similarity=0.178 Sum_probs=24.7
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
||+.+++|+++- +.|-+ =.+|+++|.+ +||+|+++.-
T Consensus 1 ~M~~~~~vlVTG--atG~i--G~~l~~~L~~-~G~~V~~~~r 37 (341)
T 3enk_A 1 SMSTKGTILVTG--GAGYI--GSHTAVELLA-HGYDVVIADN 37 (341)
T ss_dssp -CCSSCEEEEET--TTSHH--HHHHHHHHHH-TTCEEEEECC
T ss_pred CCCCCcEEEEec--CCcHH--HHHHHHHHHH-CCCcEEEEec
Confidence 455556666654 22322 2578999999 9999998863
No 144
>2w70_A Biotin carboxylase; ligase, ATP-binding, fatty acid biosynthesis, nucleotide-BIN lipid synthesis, ATP-grAsp domain, fragment screening; HET: L22; 1.77A {Escherichia coli} PDB: 1bnc_A 2j9g_A* 2v58_A* 2v59_A* 2v5a_A* 2vr1_A* 2w6m_A* 1dv1_A* 2w6o_A* 2w6n_A* 2w6q_A* 2w6z_A* 2w6p_A* 2w71_A* 3jzf_A* 3jzi_A* 3rv3_A* 3rup_A* 1dv2_A* 3rv4_A* ...
Probab=49.70 E-value=75 Score=28.82 Aligned_cols=30 Identities=17% Similarity=0.063 Sum_probs=23.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+|+++.. | ...+.+++++++ .|++|.++.+
T Consensus 4 ~ilI~g~---g--~~~~~~~~a~~~-~G~~vv~v~~ 33 (449)
T 2w70_A 4 KIVIANR---G--EIALRILRACKE-LGIKTVAVHS 33 (449)
T ss_dssp EEEECCC---H--HHHHHHHHHHHH-HTCEEEEEEE
T ss_pred eEEEeCC---c--HHHHHHHHHHHH-cCCeEEEEec
Confidence 5777753 3 346789999999 9999998864
No 145
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=49.27 E-value=13 Score=27.20 Aligned_cols=29 Identities=14% Similarity=-0.079 Sum_probs=22.0
Q ss_pred CCeEEEeCCCch--hhHHHHHH---hCCceEEEc
Q 040467 117 KPVCIIADMFFA--WSAEIAQE---YGIFNALFV 145 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~---lgiP~v~~~ 145 (387)
+||+||.|...+ -|..++++ .++|.+.++
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 899999999988 55666665 478876654
No 146
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=49.27 E-value=18 Score=30.85 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=26.6
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+++++|.|+-.+..|. .+|+.|.+ .||+|+++..
T Consensus 1 M~~~~~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~~ 35 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGK-----PMAINLLK-EGVTVYAFDL 35 (301)
T ss_dssp ---CCEEEEECCCTTHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCCCEEEEECccHHHH-----HHHHHHHH-CCCeEEEEeC
Confidence 44567899999888885 46888999 9999998753
No 147
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.93 E-value=13 Score=27.29 Aligned_cols=32 Identities=19% Similarity=0.260 Sum_probs=23.8
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++|+++-. |.+- ..+|+.|.+ .||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~-~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSE-KGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHh-CCCeEEEEEC
Confidence 467888854 4442 467899999 9999999864
No 148
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=48.23 E-value=11 Score=32.25 Aligned_cols=41 Identities=12% Similarity=0.110 Sum_probs=31.1
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC-cchhhhhh
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP-SNLKKLKS 51 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~-~~~~~~~~ 51 (387)
+++|.|+-.+..|. .+|+.|++ +||+|+++... +..+.+.+
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~-~G~~V~~~dr~~~~~~~~~~ 56 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTE-WPGGVTVYDIRIEAMTPLAE 56 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTT-STTCEEEECSSTTTSHHHHH
T ss_pred CCeEEEECcCHHHH-----HHHHHHHH-CCCeEEEEeCCHHHHHHHHH
Confidence 56899999998885 68999999 99999998632 23344444
No 149
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=48.17 E-value=31 Score=28.60 Aligned_cols=40 Identities=15% Similarity=0.278 Sum_probs=26.6
Q ss_pred CCCCccEEEEEcCCCc----------c-cHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 1 MAQRKENIVMFPLMAQ----------G-HTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~----------G-H~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|.|+ ||+++.+... | ...=++.....|++ .|++|+++++.
T Consensus 1 m~m~--kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~-aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTPK--RALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEK-HGFEVDFVSET 51 (244)
T ss_dssp --CC--EEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHT-TTCEEEEEESS
T ss_pred CCCC--EEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHH-CCCEEEEEeCC
Confidence 4454 5666666431 2 22447777889999 99999999864
No 150
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=48.11 E-value=96 Score=28.17 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=23.4
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+++|+++..+.. ..++++.|++..|+++.++.+
T Consensus 24 ~~~IlIlG~g~r-----~~al~~~~a~~~g~~~v~~~~ 56 (452)
T 2qk4_A 24 AARVLIIGSGGR-----EHTLAWKLAQSHHVKQVLVAP 56 (452)
T ss_dssp SEEEEEEECSHH-----HHHHHHHHTTCTTEEEEEEEE
T ss_pred CcEEEEECCCHH-----HHHHHHHHHhcCCCCEEEEEC
Confidence 357999988743 466788886536888777754
No 151
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=48.10 E-value=16 Score=30.01 Aligned_cols=36 Identities=14% Similarity=0.030 Sum_probs=31.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+|..-|+.|-..-...||..|++ +|++|.++=..
T Consensus 2 kI~vs~kGGvGKTt~a~~LA~~la~-~g~~VlliD~D 37 (254)
T 3kjh_A 2 KLAVAGKGGVGKTTVAAGLIKIMAS-DYDKIYAVDGD 37 (254)
T ss_dssp EEEEECSSSHHHHHHHHHHHHHHTT-TCSCEEEEEEC
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHH-CCCeEEEEeCC
Confidence 5888777899999999999999999 99999998543
No 152
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=47.37 E-value=20 Score=30.27 Aligned_cols=31 Identities=23% Similarity=0.190 Sum_probs=23.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++|+++- + |- --..|+++|.+ +||+|+.+.-
T Consensus 4 ~~ilVtG--a-G~--iG~~l~~~L~~-~g~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAG--C-GD--LGLELARRLTA-QGHEVTGLRR 34 (286)
T ss_dssp CCEEEEC--C-SH--HHHHHHHHHHH-TTCCEEEEEC
T ss_pred CcEEEEC--C-CH--HHHHHHHHHHH-CCCEEEEEeC
Confidence 4677774 4 63 34578999999 9999999974
No 153
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=47.28 E-value=1.4e+02 Score=25.66 Aligned_cols=34 Identities=15% Similarity=0.124 Sum_probs=20.3
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCC--cEEEEEe
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNR--YTITFVN 41 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rG--h~Vt~~~ 41 (387)
++.++|+++- +.|.+ -..|+++|.+ +| ++|+.+.
T Consensus 22 ~~~~~vlVtG--atG~i--G~~l~~~L~~-~g~~~~v~~~~ 57 (346)
T 4egb_A 22 SNAMNILVTG--GAGFI--GSNFVHYMLQ-SYETYKIINFD 57 (346)
T ss_dssp --CEEEEEET--TTSHH--HHHHHHHHHH-HCTTEEEEEEE
T ss_pred cCCCeEEEEC--CccHH--HHHHHHHHHh-hCCCcEEEEEe
Confidence 3445666554 33433 2478999999 99 5665554
No 154
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=47.22 E-value=11 Score=30.63 Aligned_cols=34 Identities=21% Similarity=0.168 Sum_probs=26.5
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+.++|.|+-.+..| ..+|+.|++ .||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~-~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTA-AQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHH-TTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHh-CCCEEEEEEC
Confidence 334579999877766 468999999 9999998543
No 155
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=47.22 E-value=34 Score=25.21 Aligned_cols=32 Identities=3% Similarity=0.038 Sum_probs=24.5
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-------CCceEEEcchh
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-------GIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-------giP~v~~~~~~ 148 (387)
+||+||.|...+ -|..++++. ++|.+.++...
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 899999999988 567777654 48888876533
No 156
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=47.18 E-value=43 Score=25.03 Aligned_cols=97 Identities=15% Similarity=0.095 Sum_probs=59.1
Q ss_pred EEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCCCCCch
Q 040467 9 VMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPFHLF 88 (387)
Q Consensus 9 l~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (387)
+|++..- .+=.-++.+|+.|.+ .|++ ++++......+++ .++....+.- .+++..
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~-lGf~--i~AT~GTa~~L~~-----~Gi~v~~v~k------~~egg~---------- 81 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHN-EGFK--LFATEATSDWLNA-----NNVPATPVAW------PSQEGQ---------- 81 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHT-TTCE--EEEEHHHHHHHHH-----TTCCCEEECC------GGGC------------
T ss_pred EEEEecc-cchHHHHHHHHHHHH-CCCE--EEECchHHHHHHH-----cCCeEEEEEe------ccCCCc----------
Confidence 4555433 456679999999999 9997 4455566778888 5555555531 111100
Q ss_pred hHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCc--------hhhHHHHHHhCCceEEE
Q 040467 89 PNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF--------AWSAEIAQEYGIFNALF 144 (387)
Q Consensus 89 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~--------~~~~~~a~~lgiP~v~~ 144 (387)
+...+.+.+++++- +.|+||.-.-- +.....|-.+|||++..
T Consensus 82 -------~~~~~~i~d~i~~g-------~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 82 -------NPSLSSIRKLIRDG-------SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ----------CBCHHHHHHTT-------SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred -------ccccccHHHHHHCC-------CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 00012356666665 89999985533 13346688899998763
No 157
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=47.09 E-value=17 Score=30.83 Aligned_cols=35 Identities=11% Similarity=0.179 Sum_probs=27.8
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
||+..+|.|+-.+..|. .+|..|++ +||+|+++..
T Consensus 1 Mm~~~kV~VIGaG~mG~-----~iA~~la~-~G~~V~l~d~ 35 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGS-----QIAFQTAF-HGFAVTAYDI 35 (283)
T ss_dssp CCSCCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCCCEEEEECCCHHHH-----HHHHHHHh-CCCeEEEEeC
Confidence 34456899998877774 68999999 9999999854
No 158
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=46.82 E-value=20 Score=31.96 Aligned_cols=37 Identities=11% Similarity=0.123 Sum_probs=28.8
Q ss_pred CccEEEEEcCCCcc-c---HHHHHHHHHHH-HhCCCcEEEEEe
Q 040467 4 RKENIVMFPLMAQG-H---TIPFLALALHL-ENTNRYTITFVN 41 (387)
Q Consensus 4 ~~~~il~~~~~~~G-H---~~P~l~la~~L-~~~rGh~Vt~~~ 41 (387)
+|+||+++..+-.+ | +.....++++| .+ +||+|..+.
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~-~g~~v~~i~ 43 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEAT-GKYEIIVFA 43 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHH-SSEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcc-cCcEEEEEE
Confidence 46789999877555 3 34578889999 99 999999885
No 159
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=46.49 E-value=14 Score=32.88 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=25.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEE
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFV 40 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~ 40 (387)
|||+|+-.+-.| +.+|..|++ +|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~-~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRK-HGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHh-CCCCEEEE
Confidence 579999888767 888999999 99999998
No 160
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=46.37 E-value=25 Score=26.50 Aligned_cols=33 Identities=18% Similarity=0.191 Sum_probs=25.9
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+.+|+++-.+..| ..+|+.|.+ +|++|+++...
T Consensus 19 ~~~v~IiG~G~iG-----~~la~~L~~-~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGCGRLG-----SLIANLASS-SGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHh-CCCeEEEEECC
Confidence 4689999665555 568999999 99999998643
No 161
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=45.53 E-value=37 Score=28.92 Aligned_cols=46 Identities=11% Similarity=0.124 Sum_probs=33.1
Q ss_pred ccEEEEEcCCCcc----cHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 5 KENIVMFPLMAQG----HTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 5 ~~~il~~~~~~~G----H~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
+|||+++..+..+ -...-..++++|.+ +||+|..+........+.+
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~-~g~~v~~i~~~~~~~~~~~ 52 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDK-NKYEIVPITLNEKMDLIEK 52 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCT-TTEEEEEEECSSGGGHHHH
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHH-CCCEEEEEcccCchhHHHh
Confidence 5789998876432 13446688899999 9999999987655444544
No 162
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=45.44 E-value=55 Score=28.16 Aligned_cols=32 Identities=19% Similarity=0.035 Sum_probs=21.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|||+|+.+|.. .....++|.+ +||+|..+.+.
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~-~~~~i~~Vvt~ 32 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLA-AGYEISAIFTH 32 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHH-TTCEEEEEECC
T ss_pred CEEEEEEcCHH-----HHHHHHHHHH-CCCcEEEEEcC
Confidence 46888876432 2445677889 99999866653
No 163
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=45.05 E-value=95 Score=27.33 Aligned_cols=38 Identities=13% Similarity=0.189 Sum_probs=33.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
-+++..-|+.|-..-.+.+|..+++ +|..|.|+..+..
T Consensus 65 ii~I~G~pGsGKTtLal~la~~~~~-~g~~vlyid~E~s 102 (356)
T 1u94_A 65 IVEIYGPESSGKTTLTLQVIAAAQR-EGKTCAFIDAEHA 102 (356)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHH-TTCCEEEEESSCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 3677777899999999999999999 9999999997653
No 164
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=44.41 E-value=20 Score=30.98 Aligned_cols=34 Identities=9% Similarity=0.110 Sum_probs=27.7
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
+++|+++..+ ....+++++.+ +||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~-~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKD-EGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHH-TTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHh-CCCEEEEEECCCC
Confidence 4579999877 56789999999 9999999876543
No 165
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=44.24 E-value=15 Score=32.18 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=28.2
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|++..+|+++-.+..| +..|..|++ +|++|+++--
T Consensus 1 M~~~~dvvIIG~G~~G-----l~~A~~La~-~G~~V~vlE~ 35 (369)
T 3dme_A 1 MSTDIDCIVIGAGVVG-----LAIARALAA-GGHEVLVAEA 35 (369)
T ss_dssp --CCEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEECS
T ss_pred CCCcCCEEEECCCHHH-----HHHHHHHHh-CCCeEEEEeC
Confidence 3445789999988877 788999999 9999999953
No 166
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=43.79 E-value=23 Score=28.44 Aligned_cols=20 Identities=20% Similarity=0.097 Sum_probs=17.1
Q ss_pred HHHHHHHHH-hCCCcEEEEEeC
Q 040467 22 FLALALHLE-NTNRYTITFVNT 42 (387)
Q Consensus 22 ~l~la~~L~-~~rGh~Vt~~~~ 42 (387)
=.+++++|. + +||+|+++.-
T Consensus 18 G~~~~~~l~~~-~g~~V~~~~r 38 (221)
T 3r6d_A 18 AQXLTATLLTY-TDMHITLYGR 38 (221)
T ss_dssp HHHHHHHHHHH-CCCEEEEEES
T ss_pred HHHHHHHHHhc-CCceEEEEec
Confidence 368899999 9 9999998864
No 167
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=43.60 E-value=23 Score=28.50 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=27.9
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCC-CcEEEEEeCCcc
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTN-RYTITFVNTPSN 45 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~~~~~ 45 (387)
|||+ ||+|+..+....+. +...+..|.+ + |++|++++....
T Consensus 1 M~m~--kV~ill~~g~~~~E-~~~~~~~l~~-~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 1 MSLK--KALFLILDQYADWE-GVYLASALNQ-REDWSVHTVSLDPI 42 (206)
T ss_dssp --CE--EEEEECCSSBCTTT-SHHHHHHHHT-STTEEEEEEESSSE
T ss_pred CCcc--EEEEEEcCCCcHHH-HHHHHHHHhc-cCCeEEEEEECCCC
Confidence 6665 56777666665543 4466788888 7 999999987653
No 168
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=43.60 E-value=48 Score=27.29 Aligned_cols=41 Identities=12% Similarity=0.224 Sum_probs=28.2
Q ss_pred CCCCccEEEEEcCCCcc-----------cHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 1 MAQRKENIVMFPLMAQG-----------HTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~G-----------H~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
|+|+ ||+|+.....+ ...=+......|.+ +|++|+++++..
T Consensus 1 m~m~--kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~-ag~~v~~~s~~g 52 (243)
T 1rw7_A 1 MAPK--KVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRK-EGFEVDFVSETG 52 (243)
T ss_dssp -CCC--EEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH-TTCEEEEECSSS
T ss_pred CCCc--eEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHH-CCCEEEEECCCC
Confidence 4454 57777664221 34567777888999 999999998653
No 169
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=43.19 E-value=1.2e+02 Score=26.62 Aligned_cols=37 Identities=14% Similarity=0.160 Sum_probs=31.9
Q ss_pred EEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 8 IVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 8 il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
++++-.++.|-..=++.++..+.. .|..|.|+.++..
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~-~gg~VlyId~E~s 100 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQK-MGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHH-TTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHh-cCCeEEEEecccc
Confidence 566677888999999999999999 9999999987653
No 170
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=43.19 E-value=34 Score=24.55 Aligned_cols=42 Identities=10% Similarity=0.079 Sum_probs=28.4
Q ss_pred CCccEEEEEcCCCcccH--HHHHHHHHHHHhCCCcEEEEEeCCcch
Q 040467 3 QRKENIVMFPLMAQGHT--IPFLALALHLENTNRYTITFVNTPSNL 46 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~--~P~l~la~~L~~~rGh~Vt~~~~~~~~ 46 (387)
|+|.-| ++..+-+|+. .-.+.+|.++.+ .||+|.++-..+-.
T Consensus 1 Mkk~~~-vv~~~P~g~~~~~~al~~a~a~~a-~~~~v~vff~~DGV 44 (119)
T 2d1p_B 1 MKRIAF-VFSTAPHGTAAGREGLDALLATSA-LTDDLAVFFIADGV 44 (119)
T ss_dssp CCCEEE-EECSCTTTSTHHHHHHHHHHHHHT-TCSCEEEEECGGGG
T ss_pred CcEEEE-EEcCCCCCcHHHHHHHHHHHHHHh-CCCCEEEEEehHHH
Confidence 344433 3444445655 667899999999 99999988765433
No 171
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=43.12 E-value=42 Score=23.60 Aligned_cols=31 Identities=10% Similarity=0.136 Sum_probs=22.5
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-------CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-------GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-------giP~v~~~~~ 147 (387)
+||+||.|...+ .+..+.+++ ++|.+.++..
T Consensus 46 ~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 46 TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 799999998776 455666543 5888887653
No 172
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=43.11 E-value=96 Score=25.18 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=16.2
Q ss_pred hhhHHHHHHHHhhhhccCCCCCeEEEeC
Q 040467 97 SFKPHFRKLINGLIDEQNGHKPVCIIAD 124 (387)
Q Consensus 97 ~~~~~~~~ll~~~~~~~~~~~pD~vV~D 124 (387)
.....+.+++++. +||+|++.
T Consensus 82 ~~~~~l~~~ir~~-------~P~~V~t~ 102 (227)
T 1uan_A 82 EQRLKLAQALRRL-------RPRVVFAP 102 (227)
T ss_dssp HHHHHHHHHHHHH-------CEEEEEEE
T ss_pred HHHHHHHHHHHHh-------CCCEEEeC
Confidence 4456677888888 99999874
No 173
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=42.88 E-value=14 Score=27.49 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=26.9
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+.||+++-.+..| ..+|+.|.+ +||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~-~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLA-SDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHH-CCCCEEEEECC
Confidence 4579999876655 478999999 99999999753
No 174
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=42.78 E-value=82 Score=27.89 Aligned_cols=38 Identities=16% Similarity=0.179 Sum_probs=33.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
-+++..-|+.|-..-.+.+|..++. +|..|.|+..+..
T Consensus 76 li~I~G~pGsGKTtlal~la~~~~~-~g~~vlyi~~E~s 113 (366)
T 1xp8_A 76 ITEIYGPESGGKTTLALAIVAQAQK-AGGTCAFIDAEHA 113 (366)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHH-TTCCEEEEESSCC
T ss_pred EEEEEcCCCCChHHHHHHHHHHHHH-CCCeEEEEECCCC
Confidence 3667777899999999999999999 9999999998764
No 175
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=42.58 E-value=96 Score=26.33 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=24.8
Q ss_pred EEEEEc-CCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFP-LMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~-~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|.|+- .|..| ..+|+.|++ .||+|+++...
T Consensus 23 ~I~iIGg~G~mG-----~~la~~l~~-~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLG-----GLFARYLRA-SGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHH-----HHHHHHHHT-TTCCEEEECTT
T ss_pred EEEEEcCCCHHH-----HHHHHHHHh-CCCeEEEEECC
Confidence 688887 77666 357889999 99999998643
No 176
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=42.56 E-value=18 Score=30.96 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=29.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC-cchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP-SNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~-~~~~~~~~ 51 (387)
++|+|+-.|..|. .+|..|.+ +||+|+++... +..+.+.+
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~r~~~~~~~~~~ 44 (316)
T 2ew2_A 4 MKIAIAGAGAMGS-----RLGIMLHQ-GGNDVTLIDQWPAHIEAIRK 44 (316)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSCHHHHHHHHH
T ss_pred CeEEEECcCHHHH-----HHHHHHHh-CCCcEEEEECCHHHHHHHHh
Confidence 4799998887774 57899999 99999998642 33344444
No 177
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=42.53 E-value=14 Score=32.14 Aligned_cols=74 Identities=9% Similarity=0.012 Sum_probs=40.1
Q ss_pred HHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEE
Q 040467 232 FSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIW 311 (387)
Q Consensus 232 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~ 311 (387)
+....|..+..+|-+.+... ....+++..+++..+-+++-+-.-+.-...+.+.+..+++.+++.+..+++
T Consensus 103 ~~~~~p~r~~~~~~l~~~~~---------~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~i 173 (336)
T 2wm1_A 103 TVVSYPRRFVGLGTLPMQAP---------ELAVKEMERCVKELGFPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFV 173 (336)
T ss_dssp HHHHSTTTEEEEECCCTTSH---------HHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEE
T ss_pred HHHhccCceeEEEeCCCcCH---------HHHHHHHHHHHHccCCeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEE
Confidence 34455666777765554320 012356666664432233322111111234556788999999999888776
Q ss_pred EEc
Q 040467 312 VVK 314 (387)
Q Consensus 312 ~~~ 314 (387)
=.+
T Consensus 174 H~~ 176 (336)
T 2wm1_A 174 HPW 176 (336)
T ss_dssp ECC
T ss_pred CCC
Confidence 444
No 178
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=42.12 E-value=1.6e+02 Score=25.14 Aligned_cols=105 Identities=12% Similarity=0.163 Sum_probs=63.1
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhC-CCcEEEEEeC--CcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENT-NRYTITFVNT--PSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~-rGh~Vt~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 79 (387)
.+++||+++.++. || .+.+|..+-.+- -+.+|..+.+ ++.....++ .++.+..+|.. . .
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~-----~gIp~~~~~~~----~-----~- 164 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEW-----HDIPYYHVPVD----P-----K- 164 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHT-----TTCCEEECCCC----S-----S-
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHH-----cCCCEEEcCCC----c-----C-
Confidence 3467899999887 54 466666665441 2467776653 444555555 67788876521 0 0
Q ss_pred CCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
.. ....+.+.+.+++. ++|+||.=.+.. ....+.+.+.-.++-+.+
T Consensus 165 -~r-------------~~~~~~~~~~l~~~-------~~DliVlagym~IL~~~~l~~~~~~~INiHp 211 (302)
T 3o1l_A 165 -DK-------------EPAFAEVSRLVGHH-------QADVVVLARYMQILPPQLCREYAHQVINIHH 211 (302)
T ss_dssp -CC-------------HHHHHHHHHHHHHT-------TCSEEEESSCCSCCCTTHHHHTTTCEEEEES
T ss_pred -CH-------------HHHHHHHHHHHHHh-------CCCEEEHhHhhhhcCHHHHhhhhCCeEEeCc
Confidence 00 11234456677777 899988766543 555666666666666643
No 179
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=41.07 E-value=37 Score=28.41 Aligned_cols=33 Identities=6% Similarity=-0.072 Sum_probs=27.0
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+-|+++++.++.| -=.++|++|++ +|++|.+..
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~-~Ga~V~~~~ 42 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLE-LGAQVLTTA 42 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHH-TTCEEEEEE
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHH-cCCEEEEEE
Confidence 3489999988876 34788999999 999998875
No 180
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=40.99 E-value=22 Score=31.08 Aligned_cols=38 Identities=5% Similarity=0.171 Sum_probs=27.6
Q ss_pred CccEEEEEcCCCcccHH----HHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTI----PFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~----P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+|+||+++..+..+-.. .-..++++|.+ .||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~-~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINK-EKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT-TTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhh-cCCEEEEEEE
Confidence 36788888765333222 46678999999 9999998863
No 181
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=40.97 E-value=17 Score=26.79 Aligned_cols=31 Identities=13% Similarity=0.052 Sum_probs=24.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.||+++-.+.. -..+|+.|.+ +||+|+++..
T Consensus 7 ~~v~I~G~G~i-----G~~la~~L~~-~g~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAA-----GVGLVRELTA-AGKKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHH-----HHHHHHHHHH-TTCCEEEEES
T ss_pred CEEEEECCCHH-----HHHHHHHHHH-CCCeEEEEEC
Confidence 47888866443 3578999999 9999999864
No 182
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=40.69 E-value=23 Score=26.95 Aligned_cols=32 Identities=13% Similarity=0.178 Sum_probs=27.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEE
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFV 40 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~ 40 (387)
.+++++..++ | +.|++.+++.|.+ +|.+|+++
T Consensus 24 ~~~llIaGG~-G-ItPl~sm~~~l~~-~~~~v~l~ 55 (158)
T 3lrx_A 24 GKILAIGAYT-G-IVEVYPIAKAWQE-IGNDVTTL 55 (158)
T ss_dssp SEEEEEEETT-H-HHHHHHHHHHHHH-HTCEEEEE
T ss_pred CeEEEEEccC-c-HHHHHHHHHHHHh-cCCcEEEE
Confidence 4688887776 4 9999999999999 99999988
No 183
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=40.58 E-value=41 Score=28.53 Aligned_cols=38 Identities=5% Similarity=-0.034 Sum_probs=23.1
Q ss_pred CCccEEEEE-cCCCcccHHH--HHHHHHHHHhCCCcEEEEEe
Q 040467 3 QRKENIVMF-PLMAQGHTIP--FLALALHLENTNRYTITFVN 41 (387)
Q Consensus 3 ~~~~~il~~-~~~~~GH~~P--~l~la~~L~~~rGh~Vt~~~ 41 (387)
|+.||||++ .+|-..-.+- .-.+.+.|.+ .||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~-~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQ-AGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHH-TTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHH-CCCeEEEEE
Confidence 455667655 4454433333 2346688889 999999983
No 184
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=39.43 E-value=60 Score=30.04 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=59.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCCCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLPF 85 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (387)
++-+|++. ++=.-++.+|+.|.+ .|+++. ++......+++ .|+....+. ...++|+.....-.
T Consensus 10 i~~aLISV---sDK~glvelAk~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~---~vTgfPEil~GRVK--- 72 (523)
T 3zzm_A 10 IRRALISV---YDKTGLVDLAQGLSA-AGVEII--STGSTAKTIAD-----TGIPVTPVE---QLTGFPEVLDGRVK--- 72 (523)
T ss_dssp CCEEEEEE---SSCTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHT-----TTCCCEEHH---HHHSCCCCTTTTSS---
T ss_pred ccEEEEEE---eccccHHHHHHHHHH-CCCEEE--EcchHHHHHHH-----cCCceeecc---ccCCCchhhCCccc---
Confidence 44455555 455668999999999 998764 67778888999 666666554 12344444332211
Q ss_pred CchhHHHHHH---hhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch
Q 040467 86 HLFPNFFEST---LSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA 128 (387)
Q Consensus 86 ~~~~~~~~~~---~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~ 128 (387)
.....+...+ +....++.+ +++..-. ..|+||++.+-+
T Consensus 73 TLHP~ihgGiLa~r~~~~h~~~-l~~~~i~----~iDlVvvNLYPF 113 (523)
T 3zzm_A 73 TLHPRVHAGLLADLRKSEHAAA-LEQLGIE----AFELVVVNLYPF 113 (523)
T ss_dssp SCSHHHHHHHHCCTTSHHHHHH-HHHHTCC----CCSEEEEECCCH
T ss_pred cCCchhhhhhccCCCCHHHHHH-HHHCCCC----ceeEEEEeCCCh
Confidence 1123444444 223333433 4443222 569999997654
No 185
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=39.41 E-value=36 Score=27.85 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=32.3
Q ss_pred hhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEE
Q 040467 264 TELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIW 311 (387)
Q Consensus 264 ~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~ 311 (387)
.+.+.+|+.+. ..+++|..++......+....+.++|++++..+..
T Consensus 21 ~~~l~~~~~~~--~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~ 66 (229)
T 1fy2_A 21 LPLIANQLNGR--RSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTG 66 (229)
T ss_dssp HHHHHHHHTTC--CEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEE
T ss_pred HHHHHHHhcCC--CeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEE
Confidence 44567777643 55999999875434445677799999999876554
No 186
>2ip4_A PURD, phosphoribosylamine--glycine ligase; GAR synthetase, purine nucleotid structural genomics, NPPSFA; 2.80A {Thermus thermophilus}
Probab=39.39 E-value=1.4e+02 Score=26.72 Aligned_cols=32 Identities=9% Similarity=0.050 Sum_probs=23.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|+++..++. +.++++.|++..|+++.++.+
T Consensus 1 mkililG~g~r-----~~a~a~~l~~~~g~~~v~~~~ 32 (417)
T 2ip4_A 1 MKVLVVGSGGR-----EHALLWKAAQSPRVKRLYAAP 32 (417)
T ss_dssp CEEEEEESSHH-----HHHHHHHHHTCSSCCEEEEEE
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCCCCCEEEEEC
Confidence 36899888743 678899997636888877753
No 187
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=39.13 E-value=36 Score=24.48 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=26.2
Q ss_pred CCccEEEEEcCCCcccH--HHHHHHHHHHHhCCC--cEEEEEeCC
Q 040467 3 QRKENIVMFPLMAQGHT--IPFLALALHLENTNR--YTITFVNTP 43 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~--~P~l~la~~L~~~rG--h~Vt~~~~~ 43 (387)
..+++++|+-+-..-.. +-.+..|....+ +| |+|.++.--
T Consensus 5 ~~~~K~~ivi~s~d~~~~~~~al~~A~~a~~-~G~~~eV~i~~~G 48 (117)
T 2fb6_A 5 SANDKLTILWTTDNKDTVFNMLAMYALNSKN-RGWWKHINIILWG 48 (117)
T ss_dssp STTSEEEEEECCCCHHHHHHTHHHHHHHHHH-HTSCSEEEEEECS
T ss_pred ccCCeEEEEEEcCChHHHHHHHHHHHHHHHH-cCCCCcEEEEEEC
Confidence 33466666655432222 336788888999 89 899999743
No 188
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=39.10 E-value=41 Score=24.94 Aligned_cols=35 Identities=9% Similarity=-0.047 Sum_probs=24.8
Q ss_pred EcCCCcccHHH--HHHHHHHHHhCCCcEEEEEeCCcch
Q 040467 11 FPLMAQGHTIP--FLALALHLENTNRYTITFVNTPSNL 46 (387)
Q Consensus 11 ~~~~~~GH~~P--~l~la~~L~~~rGh~Vt~~~~~~~~ 46 (387)
+..+-+|+... .+.+|..+.+ .||+|+++--.+-.
T Consensus 12 v~~~P~g~~~~~~al~~a~a~~a-~~~~v~Vff~~DGV 48 (136)
T 2hy5_B 12 NRKAPYGTIYAWEALEVVLIGAA-FDQDVCVLFLDDGV 48 (136)
T ss_dssp ECSCTTTSSHHHHHHHHHHHHGG-GCCEEEEEECGGGG
T ss_pred EeCCCCCcHHHHHHHHHHHHHHh-CCCCEEEEEEhHHH
Confidence 34445565444 5778999999 99999998765443
No 189
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=38.86 E-value=12 Score=32.40 Aligned_cols=34 Identities=3% Similarity=-0.015 Sum_probs=27.9
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|.+.+|+++-.+..| +.+|..|++ +|++|+++-.
T Consensus 6 ~~~~~vvIIG~G~aG-----l~~A~~l~~-~g~~v~lie~ 39 (333)
T 1vdc_A 6 THNTRLCIVGSGPAA-----HTAAIYAAR-AELKPLLFEG 39 (333)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHH-TTCCCEEECC
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHH-CCCeEEEEec
Confidence 445689999888666 778999999 9999999953
No 190
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=38.80 E-value=43 Score=29.20 Aligned_cols=41 Identities=15% Similarity=0.151 Sum_probs=28.2
Q ss_pred CCCCccEEEEEcCCCcc--cH-HHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 1 MAQRKENIVMFPLMAQG--HT-IPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~G--H~-~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
|||+ +++++..|..| .. .-.-.+...|.+ +|.++.+..+..
T Consensus 22 m~m~--~i~vI~NP~sg~~~~~~~~~~i~~~L~~-~g~~~~~~~t~~ 65 (337)
T 2qv7_A 22 MMRK--RARIIYNPTSGKEQFKRELPDALIKLEK-AGYETSAYATEK 65 (337)
T ss_dssp SCCE--EEEEEECTTSTTSCHHHHHHHHHHHHHH-TTEEEEEEECCS
T ss_pred cccc--eEEEEECCCCCCCchHHHHHHHHHHHHH-cCCeEEEEEecC
Confidence 4454 56777777655 43 335678888999 999999886543
No 191
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=38.63 E-value=60 Score=24.87 Aligned_cols=45 Identities=11% Similarity=0.009 Sum_probs=34.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
.-.+++..+..--+.+.+-+|..-++ .|++|+++.+-.--..+.+
T Consensus 6 kl~II~~sG~~dka~~a~ilA~~AaA-~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 6 KMNLLLFSGDYDKALASLIIANAARE-MEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHH-TTCEEEEEECGGGGGGGBC
T ss_pred cEEEEEecCCHHHHHHHHHHHHHHHH-cCCCEEEEEeehhHHHhcc
Confidence 33556666777889999999999999 9999999877554444444
No 192
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.55 E-value=21 Score=30.68 Aligned_cols=33 Identities=9% Similarity=-0.083 Sum_probs=27.2
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++++|.|+-.+..|. .+|+.|++ +||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG~-----~~a~~l~~-~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-----GAARSCLR-AGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHH-CCCeEEEEEC
Confidence 356899998888774 68999999 9999999854
No 193
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=38.54 E-value=32 Score=27.07 Aligned_cols=36 Identities=11% Similarity=0.128 Sum_probs=25.5
Q ss_pred cEEEEEcCCCcccHHHHHH-HHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQGHTIPFLA-LALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~-la~~L~~~rGh~Vt~~~~~ 43 (387)
++|+++-.. .|+..-+.. +++.|.+ .|++|.++...
T Consensus 5 mkilii~~S-~g~T~~la~~i~~~l~~-~g~~v~~~~l~ 41 (199)
T 2zki_A 5 PNILVLFYG-YGSIVELAKEIGKGAEE-AGAEVKIRRVR 41 (199)
T ss_dssp CEEEEEECC-SSHHHHHHHHHHHHHHH-HSCEEEEEECC
T ss_pred cEEEEEEeC-ccHHHHHHHHHHHHHHh-CCCEEEEEehh
Confidence 467766666 888776554 5567777 89999988643
No 194
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=38.45 E-value=27 Score=30.66 Aligned_cols=37 Identities=22% Similarity=0.117 Sum_probs=24.3
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|++++|+++- +.|.+ =..|+++|.+ +||+|+.++-
T Consensus 1 M~~~~~~ilVtG--atG~i--G~~l~~~L~~-~g~~V~~~~R 37 (352)
T 1xgk_A 1 MAQQKKTIAVVG--ATGRQ--GASLIRVAAA-VGHHVRAQVH 37 (352)
T ss_dssp --CCCCCEEEES--TTSHH--HHHHHHHHHH-TTCCEEEEES
T ss_pred CCCCCCEEEEEC--CCCHH--HHHHHHHHHh-CCCEEEEEEC
Confidence 445455676663 33433 2468899999 9999999874
No 195
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=38.34 E-value=37 Score=26.99 Aligned_cols=45 Identities=13% Similarity=0.166 Sum_probs=34.1
Q ss_pred HHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcchhHHH
Q 040467 100 PHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVGGGSFG 151 (387)
Q Consensus 100 ~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~~~~~~ 151 (387)
+.+++.++++..+ ..|+||.|.. ...+|+++|+|.+.+.++.-+.
T Consensus 129 ~e~~~~i~~l~~~----G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI 173 (196)
T 2q5c_A 129 DEITTLISKVKTE----NIKIVVSGKT---VTDEAIKQGLYGETINSGEESL 173 (196)
T ss_dssp GGHHHHHHHHHHT----TCCEEEECHH---HHHHHHHTTCEEEECCCCHHHH
T ss_pred HHHHHHHHHHHHC----CCeEEECCHH---HHHHHHHcCCcEEEEecCHHHH
Confidence 4566677776555 7999999864 5788999999999987755443
No 196
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=38.33 E-value=36 Score=27.29 Aligned_cols=33 Identities=27% Similarity=0.237 Sum_probs=23.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
++|+++- +.|.+ =..|+++|.+ +||+|+.+.-.
T Consensus 5 ~~ilItG--atG~i--G~~l~~~L~~-~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIG--ASGFV--GSALLNEALN-RGFEVTAVVRH 37 (227)
T ss_dssp CEEEEET--CCHHH--HHHHHHHHHT-TTCEEEEECSC
T ss_pred CEEEEEc--CCchH--HHHHHHHHHH-CCCEEEEEEcC
Confidence 4666653 33433 3578999999 99999998743
No 197
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=38.13 E-value=36 Score=26.17 Aligned_cols=39 Identities=10% Similarity=0.224 Sum_probs=29.4
Q ss_pred ccEEEEEcCCC---cccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPLMA---QGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~~~---~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
..+|+++|.=+ .--..+.-.|++.|.+ +|.+|.|..+|.
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~-~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKK-EGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 34677776521 1234688999999999 999999999875
No 198
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=38.00 E-value=88 Score=28.44 Aligned_cols=30 Identities=13% Similarity=0.314 Sum_probs=21.0
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCC-cEEEEE
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNR-YTITFV 40 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rG-h~Vt~~ 40 (387)
++||+++-.+.+.| +||++|++ .+ .+..++
T Consensus 21 ~m~ilvlG~ggre~-----ala~~l~~-s~~v~~v~~ 51 (442)
T 3lp8_A 21 SMNVLVIGSGGREH-----SMLHHIRK-STLLNKLFI 51 (442)
T ss_dssp CEEEEEEECSHHHH-----HHHHHHTT-CTTEEEEEE
T ss_pred CCEEEEECCChHHH-----HHHHHHHh-CCCCCEEEE
Confidence 57899998886554 58999988 65 343344
No 199
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=37.74 E-value=11 Score=32.37 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=26.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+|+-.|+.|- .+|..|++ .||+|+++...
T Consensus 4 kI~iiGaGa~G~-----~~a~~L~~-~g~~V~~~~r~ 34 (294)
T 3g17_A 4 SVAIIGPGAVGT-----TIAYELQQ-SLPHTTLIGRH 34 (294)
T ss_dssp CEEEECCSHHHH-----HHHHHHHH-HCTTCEEEESS
T ss_pred EEEEECCCHHHH-----HHHHHHHH-CCCeEEEEEec
Confidence 599999998885 57899999 99999999754
No 200
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=37.72 E-value=23 Score=30.46 Aligned_cols=35 Identities=20% Similarity=0.177 Sum_probs=27.9
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+.+++|.|+-.|..|. .+|+.|.+ .||+|+++..
T Consensus 27 ~~~~~~I~iIG~G~mG~-----~~a~~l~~-~g~~V~~~~~ 61 (316)
T 2uyy_A 27 TPTDKKIGFLGLGLMGS-----GIVSNLLK-MGHTVTVWNR 61 (316)
T ss_dssp CCCSSCEEEECCSHHHH-----HHHHHHHH-TTCCEEEECS
T ss_pred CCCCCeEEEEcccHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 34457899998887774 57889999 9999988854
No 201
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=37.31 E-value=37 Score=26.17 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=28.9
Q ss_pred cEEEEEcCCC---cccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 6 ENIVMFPLMA---QGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 6 ~~il~~~~~~---~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.+|+++|.=+ .--..+.-.|++.|.+ +|.+|.|..+|.
T Consensus 23 ~~ViIvPGYGmAvAqAQ~~v~el~~~L~~-~G~~V~faIHPV 63 (184)
T 1d4o_A 23 NSIIITPGYGLCAAKAQYPIADLVKMLSE-QGKKVRFGIHPV 63 (184)
T ss_dssp SEEEEEECHHHHHTTTHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 4677776521 1234688999999999 999999999864
No 202
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=37.24 E-value=22 Score=31.42 Aligned_cols=38 Identities=13% Similarity=0.222 Sum_probs=27.2
Q ss_pred CccEEEEEcCCCcccH----HHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHT----IPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~----~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+|+||+++..+-.+-. .....++++|.+ +||+|..+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~-~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDK-DKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCT-TTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhh-cCCEEEEEEE
Confidence 3678888886543322 344778899999 9999998863
No 203
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=37.09 E-value=38 Score=28.00 Aligned_cols=33 Identities=12% Similarity=-0.012 Sum_probs=25.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
-++++++.++.| -=.++|++|++ +|++|.+..-
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~-~G~~V~~~~r 40 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVE-GGAEVLLTGR 40 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 367777776654 34689999999 9999988863
No 204
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=36.65 E-value=32 Score=28.94 Aligned_cols=43 Identities=9% Similarity=0.057 Sum_probs=34.0
Q ss_pred CCccEEEEEcCC---CcccHHHHHHHHHHHHhCCCcEEEEEeCCcch
Q 040467 3 QRKENIVMFPLM---AQGHTIPFLALALHLENTNRYTITFVNTPSNL 46 (387)
Q Consensus 3 ~~~~~il~~~~~---~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~ 46 (387)
|..+|.+|++.+ +.|-=.-.-.|+.-|.+ ||++||..--.++-
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~-~G~~Vt~~K~DPYl 65 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKS-CGLHVTSIKIDPYI 65 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHH-TTCCEEEEEEECSS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHH-CCCcceeeecccce
Confidence 456789999987 45666778889999999 99999999755543
No 205
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=36.23 E-value=26 Score=32.39 Aligned_cols=39 Identities=13% Similarity=0.076 Sum_probs=25.9
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCC-----CcEEEEEeCCc
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTN-----RYTITFVNTPS 44 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~r-----Gh~Vt~~~~~~ 44 (387)
|||++++|.++-.|+. -..++|..|.+ + |++|+++-...
T Consensus 24 m~m~~~KIaVIGaGsv----~~~ala~~L~~-~~~~l~~~eV~L~Di~~ 67 (472)
T 1u8x_X 24 MKKKSFSIVIAGGGST----FTPGIVLMLLD-HLEEFPIRKLKLYDNDK 67 (472)
T ss_dssp --CCCEEEEEECTTSS----SHHHHHHHHHH-TTTTSCEEEEEEECSCH
T ss_pred cccCCCEEEEECCCHH----HHHHHHHHHHh-CCCCCCCCEEEEEeCCH
Confidence 5566789999987763 33345555666 5 89999997543
No 206
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=36.18 E-value=40 Score=29.20 Aligned_cols=73 Identities=3% Similarity=-0.072 Sum_probs=39.7
Q ss_pred HHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEE
Q 040467 232 FSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIW 311 (387)
Q Consensus 232 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~ 311 (387)
+....|..+..++-+.+... ....+++..+++ .+-+++-+-..+.-...+.+.+..+.+.+++.+..+++
T Consensus 107 ~~~~~p~r~~~~~~l~~~~~---------~~a~~el~~~~~-~g~~Gv~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~i 176 (334)
T 2hbv_A 107 FAAHNPQRIKVLAQVPLQDL---------DLACKEASRAVA-AGHLGIQIGNHLGDKDLDDATLEAFLTHCANEDIPILV 176 (334)
T ss_dssp HHTTCTTTEEECBCCCTTSH---------HHHHHHHHHHHH-HTCCCEEEESCBTTBCTTSHHHHHHHHHHHHTTCCEEE
T ss_pred HHhhCCCeEEEEEecCccCH---------HHHHHHHHHHHH-cCCeEEEECCCCCCCCCCcHHHHHHHHHHHHCCCEEEE
Confidence 34455556666555543320 012355666663 22233322222222235567899999999999988776
Q ss_pred EEc
Q 040467 312 VVK 314 (387)
Q Consensus 312 ~~~ 314 (387)
=.+
T Consensus 177 H~~ 179 (334)
T 2hbv_A 177 HPW 179 (334)
T ss_dssp ECC
T ss_pred CCC
Confidence 544
No 207
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=36.13 E-value=53 Score=23.91 Aligned_cols=38 Identities=5% Similarity=-0.143 Sum_probs=26.5
Q ss_pred EEcCCCc--ccHHHHHHHHHHHHhCCCcEE-EEEeCCcchhh
Q 040467 10 MFPLMAQ--GHTIPFLALALHLENTNRYTI-TFVNTPSNLKK 48 (387)
Q Consensus 10 ~~~~~~~--GH~~P~l~la~~L~~~rGh~V-t~~~~~~~~~~ 48 (387)
++..+-+ -.....+.+|.++.+ .||+| +++-..+-...
T Consensus 6 iv~~~p~~~~~~~~al~~a~a~~~-~g~~v~~vff~~dGV~~ 46 (130)
T 2hy5_A 6 QINEGPYQHQASDSAYQFAKAALE-KGHEIFRVFFYHDGVNN 46 (130)
T ss_dssp EECSCTTTSTHHHHHHHHHHHHHH-TTCEEEEEEECGGGGGG
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHh-cCCeeCEEEEechHHHH
Confidence 3344444 345678999999999 99999 88876544433
No 208
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=35.99 E-value=27 Score=29.85 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=26.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
.+|.|+-.+..|+ .+|..|++ +||+|+++...
T Consensus 16 ~~I~VIG~G~mG~-----~iA~~la~-~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGA-----GIAQVAAA-TGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHH-TTCEEEEECSC
T ss_pred CEEEEECCCHHHH-----HHHHHHHh-CCCeEEEEECC
Confidence 4799999988886 58899999 99999988643
No 209
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=35.87 E-value=33 Score=23.90 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=23.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC-cEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNR-YTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rG-h~Vt~~~~ 42 (387)
++|+++-.+..| ..+++.|.+ +| ++|+++..
T Consensus 6 ~~v~I~G~G~iG-----~~~~~~l~~-~g~~~v~~~~r 37 (118)
T 3ic5_A 6 WNICVVGAGKIG-----QMIAALLKT-SSNYSVTVADH 37 (118)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHH-CSSEEEEEEES
T ss_pred CeEEEECCCHHH-----HHHHHHHHh-CCCceEEEEeC
Confidence 468888554444 468899999 99 99988864
No 210
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=35.85 E-value=28 Score=31.03 Aligned_cols=33 Identities=6% Similarity=0.127 Sum_probs=26.8
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++++|+++-.+.. -+..|..|++ +||+|+++-.
T Consensus 2 ~~~~v~iiG~G~~-----Gl~~A~~l~~-~g~~v~v~E~ 34 (384)
T 2bi7_A 2 KSKKILIVGAGFS-----GAVIGRQLAE-KGHQVHIIDQ 34 (384)
T ss_dssp CCCEEEEECCSHH-----HHHHHHHHHT-TTCEEEEEES
T ss_pred CcCCEEEECcCHH-----HHHHHHHHHH-CCCcEEEEEe
Confidence 3578999988764 4678999999 9999999964
No 211
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=35.80 E-value=22 Score=31.50 Aligned_cols=31 Identities=26% Similarity=0.238 Sum_probs=26.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|.|+-.|..|. .+|..|++ +||+|+++...
T Consensus 17 kI~iIG~G~mG~-----~la~~L~~-~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGT-----ALAMVLSK-KCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHH-----HHHHHHTT-TEEEEEEECSC
T ss_pred eEEEECCCHHHH-----HHHHHHHh-CCCEEEEEECC
Confidence 799999988884 57999999 99999998643
No 212
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=35.72 E-value=40 Score=26.57 Aligned_cols=38 Identities=11% Similarity=0.233 Sum_probs=28.9
Q ss_pred cEEEEEcCCC---cccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 6 ENIVMFPLMA---QGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 6 ~~il~~~~~~---~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.+|+++|.-+ .--..+.-.|++.|.+ +|.+|.|..+|.
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~-~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKK-EGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHH-cCCeEEEEeccc
Confidence 4677776531 1234678999999999 999999999875
No 213
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=35.52 E-value=63 Score=24.66 Aligned_cols=44 Identities=9% Similarity=0.047 Sum_probs=32.2
Q ss_pred hhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchhh---------------HHHHHHhCCceEEEcc
Q 040467 96 LSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAWS---------------AEIAQEYGIFNALFVG 146 (387)
Q Consensus 96 ~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~---------------~~~a~~lgiP~v~~~~ 146 (387)
..+...+.+++++. +||.+..+..++.- ..++.+.|+|+.-+.+
T Consensus 45 ~~i~~~l~~~i~~~-------~Pd~vaiE~vf~~~n~~s~~~lgqarGv~~~a~~~~~ipv~eytp 103 (158)
T 1hjr_A 45 KLIYAGVTEIITQF-------QPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAA 103 (158)
T ss_dssp HHHHHHHHHHHHHH-------CCSEEEEEECCCCCCTTTHHHHHHHHHHHHHHHHTTTCCEEEEEH
T ss_pred HHHHHHHHHHHHHc-------CCCEEEEeecccccChHHHHHHHHHHHHHHHHHHHcCCCEEEECH
Confidence 55666778888888 89998888776521 3556678899888755
No 214
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=35.52 E-value=47 Score=27.83 Aligned_cols=46 Identities=13% Similarity=0.002 Sum_probs=32.2
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhh
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKS 51 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~ 51 (387)
+++||||+.-=-+. |.--+..|+++|++ +|+|+++.+...+...-.
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~--~~~V~VVAP~~~~Sg~g~ 54 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD--LGEVDVVAPDRNRSGASN 54 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT--TSEEEEEEESSCCTTCTT
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh--cCCEEEEecCCCCcCccc
Confidence 45688888766554 44557778888865 689999999887765544
No 215
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=35.47 E-value=1.3e+02 Score=23.40 Aligned_cols=41 Identities=17% Similarity=0.174 Sum_probs=25.7
Q ss_pred EEeccccCHHH-hhCccCcceeeeccChhHHHHH---HHcCCccc
Q 040467 346 LVVQKWAPQVE-ILSHKSISAFLSHCGWNSVLEA---LSHRVPII 386 (387)
Q Consensus 346 v~~~~~~pq~~-lL~~~~~~~~v~HGG~~s~~ea---l~~GvP~l 386 (387)
.++++..+++. ++..-+-..++--||.||..|+ +.+++|++
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~ 135 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVV 135 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEE
T ss_pred eEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEE
Confidence 44556666443 3333233467778999987665 67899986
No 216
>3cmw_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 2.80A {Escherichia coli} PDB: 3cmt_A* 3cmx_A* 3cmv_A*
Probab=34.99 E-value=2.2e+02 Score=31.13 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=35.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKK 48 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~ 48 (387)
-+++...|+.|-..-.+.+|...+. +|..|.|++.+...+.
T Consensus 385 lilI~G~pGsGKTtLaLq~a~~~~~-~G~~vlyis~E~s~~~ 425 (1706)
T 3cmw_A 385 IVEIYGPESSGKTTLTLQVIAAAQR-EGKTCAFIDAEHALDP 425 (1706)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHH-TTCCEEEECTTSCCCH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHH-hCCCeEEEEccCchHH
Confidence 3677778899999999999999999 9999999998765443
No 217
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=34.94 E-value=52 Score=28.70 Aligned_cols=28 Identities=14% Similarity=0.020 Sum_probs=22.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 040467 290 IAASQMMQLAMALEACGKNFIWVVKPPL 317 (387)
Q Consensus 290 ~~~~~~~~~~~a~~~~~~~~l~~~~~~~ 317 (387)
.+.+..+.+.+++.+...+.||.+.++.
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY 89 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 3455677799999999999999988775
No 218
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=34.82 E-value=35 Score=29.00 Aligned_cols=78 Identities=14% Similarity=0.076 Sum_probs=41.6
Q ss_pred HHHHHHHhhcCCCeEEeccccCCCCCCCCCCCCCCCChhhhccccCCCCCCeeEEEecCC---CcCCCHHHHHHHHHHHH
Q 040467 227 IGLMYFSRKLGRPVWPVGSLLLSTGSRAGAGKEYGISTELCKNWLDTKPCNSVIYVSFGS---QNTIAASQMMQLAMALE 303 (387)
Q Consensus 227 ~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~vs~GS---~~~~~~~~~~~~~~a~~ 303 (387)
.++..+....|..++.++.+.+... ....+++.+ +...+-+++-.. .+. -...+.+.+..+++.++
T Consensus 80 ~~~~~~~~~~p~r~~~~~~v~p~~~---------~~a~~eL~~-~~~~g~~Gi~~~-~~~~~~~~~~~d~~~~~~~~~a~ 148 (291)
T 3irs_A 80 ADVAAVAKAYPDKFHPVGSIEAATR---------KEAMAQMQE-ILDLGIRIVNLE-PGVWATPMHVDDRRLYPLYAFCE 148 (291)
T ss_dssp HHHHHHHHHSTTTEEEEEECCCSSH---------HHHHHHHHH-HHHTTCCCEEEC-GGGSSSCCCTTCGGGHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEEEecCccCH---------HHHHHHHHH-HHhCCCeEEEEe-CCCCCCCCCCCCHHHHHHHHHHH
Confidence 3444445566666776666554320 012244544 433222333222 221 12245567888999999
Q ss_pred hCCCcEEEEEcC
Q 040467 304 ACGKNFIWVVKP 315 (387)
Q Consensus 304 ~~~~~~l~~~~~ 315 (387)
+.+..+++=.+.
T Consensus 149 e~glpv~iH~~~ 160 (291)
T 3irs_A 149 DNGIPVIMMTGG 160 (291)
T ss_dssp HTTCCEEEECSS
T ss_pred HcCCeEEEeCCC
Confidence 999998876654
No 219
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=34.80 E-value=42 Score=26.54 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=28.9
Q ss_pred cEEEEEcCCC---cccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 6 ENIVMFPLMA---QGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 6 ~~il~~~~~~---~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.+|+++|.-+ .=-..+.-.|++.|.+ +|.+|.|..+|.
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~-~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTE-QGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHH-CCCeEEEEeCcc
Confidence 4677776521 1235678899999999 999999999874
No 220
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=34.71 E-value=24 Score=31.51 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=27.4
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
.+.+|+|+-.+..| +.+|..|++ +|++|+++-
T Consensus 5 ~~~dVvIVGaG~aG-----l~~A~~L~~-~G~~V~viE 36 (399)
T 2x3n_A 5 NHIDVLINGCGIGG-----AMLAYLLGR-QGHRVVVVE 36 (399)
T ss_dssp CEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred CcCCEEEECcCHHH-----HHHHHHHHh-CCCcEEEEe
Confidence 34689999988776 788999999 999999995
No 221
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=34.27 E-value=18 Score=33.46 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=24.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||+|+-.+..| |.-|..|++ +|++|+++=
T Consensus 3 ~VvVIGaG~~G-----L~aA~~La~-~G~~V~VlE 31 (501)
T 4dgk_A 3 PTTVIGAGFGG-----LALAIRLQA-AGIPVLLLE 31 (501)
T ss_dssp CEEEECCHHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred CEEEECCcHHH-----HHHHHHHHH-CCCcEEEEc
Confidence 58888777665 777899999 999999983
No 222
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=34.26 E-value=31 Score=28.41 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=20.5
Q ss_pred cccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 16 QGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 16 ~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.|.+ -.++|+++++ +|++|+++..+.
T Consensus 28 SG~m--G~aiA~~~~~-~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLS-AGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHH-TTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHH-CCCEEEEEeCCc
Confidence 4543 3568999999 999999998654
No 223
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=34.22 E-value=71 Score=29.15 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=26.7
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+..||+|+-.+..| +.+|+.|++ +||+|+..=.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~-~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAK-LGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHh-CCCEEEEEeC
Confidence 34689999998766 356999999 9999999853
No 224
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=34.17 E-value=30 Score=29.98 Aligned_cols=32 Identities=9% Similarity=0.054 Sum_probs=27.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCC-cEEEEEeCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNR-YTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rG-h~Vt~~~~~ 43 (387)
++|.|+-.+..| ..+|+.|++ .| |+|+++...
T Consensus 25 m~IgvIG~G~mG-----~~lA~~L~~-~G~~~V~~~dr~ 57 (317)
T 4ezb_A 25 TTIAFIGFGEAA-----QSIAGGLGG-RNAARLAAYDLR 57 (317)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHT-TTCSEEEEECGG
T ss_pred CeEEEECccHHH-----HHHHHHHHH-cCCCeEEEEeCC
Confidence 479999988887 678999999 99 999988643
No 225
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=33.92 E-value=48 Score=28.87 Aligned_cols=28 Identities=14% Similarity=0.097 Sum_probs=22.5
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 040467 290 IAASQMMQLAMALEACGKNFIWVVKPPL 317 (387)
Q Consensus 290 ~~~~~~~~~~~a~~~~~~~~l~~~~~~~ 317 (387)
.+.+..+.+.+++.+...+.||...++.
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 89 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF 89 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch
Confidence 3345677799999999999999987764
No 226
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=33.80 E-value=42 Score=29.11 Aligned_cols=47 Identities=11% Similarity=0.105 Sum_probs=34.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC---cchhhhhhcCCCCCCeeEE
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP---SNLKKLKSSLPQNSSIHLR 62 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~---~~~~~~~~~~~~~~~i~~~ 62 (387)
.||.|+-.+..| |-.+|+-|.+ +||+|+..=.. ...+.+++ .++++.
T Consensus 5 ~~i~~iGiGg~G----ms~~A~~L~~-~G~~V~~~D~~~~~~~~~~L~~-----~gi~v~ 54 (326)
T 3eag_A 5 KHIHIIGIGGTF----MGGLAAIAKE-AGFEVSGCDAKMYPPMSTQLEA-----LGIDVY 54 (326)
T ss_dssp CEEEEESCCSHH----HHHHHHHHHH-TTCEEEEEESSCCTTHHHHHHH-----TTCEEE
T ss_pred cEEEEEEECHHH----HHHHHHHHHh-CCCEEEEEcCCCCcHHHHHHHh-----CCCEEE
Confidence 479999999888 5579999999 99999998432 23445666 455554
No 227
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=33.71 E-value=20 Score=30.74 Aligned_cols=35 Identities=6% Similarity=0.131 Sum_probs=28.7
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+||.+.+|+++-.+..| +..|..|++ +|++|+++-
T Consensus 1 ~~~~~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~lie 35 (320)
T 1trb_A 1 GTTKHSKLLILGSGPAG-----YTAAVYAAR-ANLQPVLIT 35 (320)
T ss_dssp CCEEEEEEEEECCSHHH-----HHHHHHHHT-TTCCCEEEC
T ss_pred CCCCcCCEEEECcCHHH-----HHHHHHHHH-CCCcEEEEc
Confidence 35566789999888666 678999999 999999985
No 228
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=33.70 E-value=39 Score=26.41 Aligned_cols=32 Identities=25% Similarity=0.322 Sum_probs=23.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++|+++ ++.|-+ -..++++|.+ +||+|+.+.-
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~-~g~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQ-AGYEVTVLVR 35 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHH-CCCeEEEEEe
Confidence 466665 333432 4678999999 9999999874
No 229
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=33.51 E-value=48 Score=28.60 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=27.4
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++|.|+-.+..| ..+|+.|++ +||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~-~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCE-AGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHH-TTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHh-CCCeEEEEcC
Confidence 3589999998888 568999999 9999998853
No 230
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=33.38 E-value=49 Score=25.31 Aligned_cols=28 Identities=25% Similarity=0.251 Sum_probs=23.3
Q ss_pred eEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 040467 279 VIYVSFGSQNTIAASQMMQLAMALEACG 306 (387)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~a~~~~~ 306 (387)
.+|+++||......+.++..++++.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6899999998777778888888888753
No 231
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=33.34 E-value=66 Score=24.61 Aligned_cols=28 Identities=21% Similarity=0.304 Sum_probs=24.3
Q ss_pred eEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 040467 279 VIYVSFGSQNTIAASQMMQLAMALEACG 306 (387)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~a~~~~~ 306 (387)
.+|+++||......+.++..++++.+.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 5899999998888888999999998853
No 232
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=33.25 E-value=83 Score=22.06 Aligned_cols=37 Identities=19% Similarity=0.306 Sum_probs=26.5
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|++++|+++- .+-.-...+...|.. .|++|..+..
T Consensus 1 m~m~~~~ilivd----d~~~~~~~l~~~L~~-~g~~v~~~~~ 37 (132)
T 2rdm_A 1 MSLEAVTILLAD----DEAILLLDFESTLTD-AGFLVTAVSS 37 (132)
T ss_dssp -CCSSCEEEEEC----SSHHHHHHHHHHHHH-TTCEEEEESS
T ss_pred CCCCCceEEEEc----CcHHHHHHHHHHHHH-cCCEEEEECC
Confidence 667788898884 444556677888888 9999886543
No 233
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=33.13 E-value=48 Score=27.83 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=31.7
Q ss_pred CccEEEEEcC--CCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 4 RKENIVMFPL--MAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 4 ~~~~il~~~~--~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+++++++++. |+.|-..-...||..|++ .|.+|.++-..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~-~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQ-AGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHH-TTCCEEEEECC
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHh-CCCeEEEEeCC
Confidence 3455666654 688999999999999999 99999998654
No 234
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=32.96 E-value=25 Score=30.36 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=26.9
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCc-EEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRY-TITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh-~Vt~~~~ 42 (387)
..++|.|+-.+..| ..+|+.|++ .|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~-~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQ-AGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHH-HSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHH-CCCCeEEEEcC
Confidence 34689999888877 478999999 999 9998865
No 235
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=32.69 E-value=52 Score=31.25 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=35.6
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+.+||+.+.+.-.|-....-++..|.. +|++|..+....
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~-~G~eVi~LG~~v 136 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQC-NNYEIVDLGVMV 136 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHT-TTCEEEECCSSB
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHH-CCCEEEECCCCC
Confidence 678999999999999999999999999 999999987543
No 236
>2xcl_A Phosphoribosylamine--glycine ligase; GAR-SYN, ATP-grAsp, metal binding; HET: ANP; 2.10A {Bacillus subtilis} PDB: 2xd4_A*
Probab=32.47 E-value=1.5e+02 Score=26.42 Aligned_cols=32 Identities=13% Similarity=0.068 Sum_probs=23.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|+++..++ .+.++++.|+++.|+++.++.+
T Consensus 1 m~ililG~g~-----r~~~~a~~~~~~~g~~~v~~~~ 32 (422)
T 2xcl_A 1 MNVLIIGKGG-----REHTLAWKAAQSSLVENVFAAP 32 (422)
T ss_dssp CEEEEEECSH-----HHHHHHHHHTTCTTCSEEEEEE
T ss_pred CEEEEECCCH-----HHHHHHHHHHhCCCCCEEEEeC
Confidence 3688888874 3678899887635899888764
No 237
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.15 E-value=76 Score=22.68 Aligned_cols=32 Identities=13% Similarity=0.239 Sum_probs=22.2
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-------CCceEEEcchh
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-------GIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-------giP~v~~~~~~ 148 (387)
+||+||.|...+ .+..+.+.+ .+|.+.++...
T Consensus 48 ~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~ 88 (136)
T 3t6k_A 48 LPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQG 88 (136)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCC
Confidence 799999998776 355555432 57888776543
No 238
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=32.12 E-value=56 Score=28.57 Aligned_cols=27 Identities=7% Similarity=0.005 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 040467 291 AASQMMQLAMALEACGKNFIWVVKPPL 317 (387)
Q Consensus 291 ~~~~~~~~~~a~~~~~~~~l~~~~~~~ 317 (387)
+.+..+.+.+++.+...+.||.+.++.
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 90 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGM 90 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 345577799999999999999998775
No 239
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=32.12 E-value=57 Score=27.84 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=26.3
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||++++|+++... .......+.|.+ .||+|.+..
T Consensus 4 ~~~~mki~v~~~~-----~~~~~~~~~L~~-~g~~v~~~~ 37 (300)
T 2rir_A 4 MLTGLKIAVIGGD-----ARQLEIIRKLTE-QQADIYLVG 37 (300)
T ss_dssp CCCSCEEEEESBC-----HHHHHHHHHHHH-TTCEEEEES
T ss_pred cccCCEEEEECCC-----HHHHHHHHHHHh-CCCEEEEEe
Confidence 5677889888543 355677899999 999998774
No 240
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=32.07 E-value=3.2e+02 Score=25.49 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=25.6
Q ss_pred HHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHh-------CCceEEE
Q 040467 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEY-------GIFNALF 144 (387)
Q Consensus 101 ~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~l-------giP~v~~ 144 (387)
.+++++++. +||+||.... +..+|+++ |||++.+
T Consensus 429 ~l~~~i~~~-------~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFTD-------KPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHT-------CCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHhc-------CCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 455667776 8999999875 34566666 9999886
No 241
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=32.06 E-value=38 Score=29.97 Aligned_cols=39 Identities=5% Similarity=0.019 Sum_probs=29.0
Q ss_pred CCccEEEEEcCCCcccHHHH----HHHHHHHHhCCCcEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIPF----LALALHLENTNRYTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~----l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|+||+++..+-.+--.-- ..++++|.+ .||+|+.+-.
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~-~~~~v~~i~i 43 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDK-TRFDVVLLGI 43 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT-TTEEEEEEEE
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhh-cCCeEEEEEE
Confidence 35778999888755554433 478889989 9999998864
No 242
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=32.03 E-value=34 Score=25.49 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=27.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEE
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFV 40 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~ 40 (387)
.+++++..++ =+.|++.+++.|.+ +|.+|+++
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~-~~~~v~l~ 50 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQE-IGNDVTTL 50 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHH-TTCEEEEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHh-cCCcEEEE
Confidence 4688887776 38999999999999 99999988
No 243
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=31.87 E-value=69 Score=23.04 Aligned_cols=37 Identities=16% Similarity=0.138 Sum_probs=25.3
Q ss_pred CeeEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEEE
Q 040467 277 NSVIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVV 313 (387)
Q Consensus 277 ~~~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~~ 313 (387)
..+|+++.||......+.+..+.+.+++....+.+.+
T Consensus 6 ~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~ 42 (126)
T 3lyh_A 6 HQIILLAHGSSDARWCETFEKLAEPTVESIENAAIAY 42 (126)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence 4599999999753334567777777766545665554
No 244
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=31.78 E-value=45 Score=26.77 Aligned_cols=37 Identities=16% Similarity=0.123 Sum_probs=25.5
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||.-+.++++++..+.| -=.++|++|++ +|++|.+..
T Consensus 1 M~~~~~k~vlVTGas~g---IG~~~a~~l~~-~G~~V~~~~ 37 (223)
T 3uce_A 1 MMGSDKTVYVVLGGTSG---IGAELAKQLES-EHTIVHVAS 37 (223)
T ss_dssp ----CCEEEEEETTTSH---HHHHHHHHHCS-TTEEEEEES
T ss_pred CCCCCCCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEec
Confidence 44334567788777653 34688999999 999998875
No 245
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=31.57 E-value=38 Score=26.86 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=22.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+++- +.|.+ =..|+++|.+ +||+|+.+.-.
T Consensus 2 kvlVtG--atG~i--G~~l~~~L~~-~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIG--ATGRA--GSRILEEAKN-RGHEVTAIVRN 33 (221)
T ss_dssp EEEEET--TTSHH--HHHHHHHHHH-TTCEEEEEESC
T ss_pred eEEEEc--CCchh--HHHHHHHHHh-CCCEEEEEEcC
Confidence 466554 33333 2588999999 99999998743
No 246
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=31.44 E-value=40 Score=28.29 Aligned_cols=30 Identities=13% Similarity=-0.036 Sum_probs=25.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+|.|+-.|..|. .+|..|++ +||+|+++..
T Consensus 2 ~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~r 31 (291)
T 1ks9_A 2 KITVLGCGALGQ-----LWLTALCK-QGHEVQGWLR 31 (291)
T ss_dssp EEEEECCSHHHH-----HHHHHHHH-TTCEEEEECS
T ss_pred eEEEECcCHHHH-----HHHHHHHh-CCCCEEEEEc
Confidence 688888877774 68999999 9999999864
No 247
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=31.40 E-value=43 Score=31.01 Aligned_cols=35 Identities=9% Similarity=0.100 Sum_probs=29.3
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCC-Cc-EEEEEeCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTN-RY-TITFVNTP 43 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~r-Gh-~Vt~~~~~ 43 (387)
++.++|.++-.|..| +.+|..|++ + || +|+++-..
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~-~~G~~~V~~~D~~ 52 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFAD-APCFEKVLGFQRN 52 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHH-STTCCEEEEECCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHH-hCCCCeEEEEECC
Confidence 345689999999998 578999999 9 99 99998643
No 248
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=31.35 E-value=1e+02 Score=25.49 Aligned_cols=56 Identities=9% Similarity=-0.003 Sum_probs=36.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEecc
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIP 65 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~ 65 (387)
|||+.-=-+. |.--+..|+++|++ .| +|+++.|...+...-....-...+++..++
T Consensus 2 ~ILlTNDDGi-~apGi~aL~~~l~~-~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~ 57 (244)
T 2e6c_A 2 RILVTNDDGI-YSPGLWALAEAASQ-FG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHP 57 (244)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTT-TS-EEEEEEECSSCCCCCSSCCCSSCBEEEECC
T ss_pred eEEEEcCCCC-CcHhHHHHHHHHHh-CC-CEEEEecCCCCcCCcccccCCCCeEEEEec
Confidence 5665544333 33448889999999 98 899999888766555433322445555553
No 249
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=31.26 E-value=86 Score=21.71 Aligned_cols=31 Identities=19% Similarity=0.390 Sum_probs=21.7
Q ss_pred CCeEEEeCCCch--hhHHHHHH----hCCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQE----YGIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~----lgiP~v~~~~~ 147 (387)
+||+||.|...+ .+..+.++ .++|.+.++..
T Consensus 46 ~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 46 QPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp CCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 799999998776 34455443 36888777643
No 250
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=31.24 E-value=44 Score=28.42 Aligned_cols=39 Identities=15% Similarity=0.225 Sum_probs=31.4
Q ss_pred ccEEEEEcC--CCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPL--MAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~--~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+.++++++. |+.|-..-...||..|++ .|.+|.++-...
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~-~G~rVLLID~D~ 131 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQ-TNKRVLLIDCDM 131 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHT-TTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHh-CCCCEEEEeccC
Confidence 445665554 588999999999999999 999999996543
No 251
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=31.18 E-value=3.3e+02 Score=25.35 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=27.1
Q ss_pred HHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHh-------CCceEEE
Q 040467 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEY-------GIFNALF 144 (387)
Q Consensus 101 ~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~l-------giP~v~~ 144 (387)
.+++++++. +||++|.+.. +..+|+++ |||++.+
T Consensus 425 ~l~~~i~~~-------~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTR-------QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHH-------CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhc-------CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 456677777 8999999864 57778888 9999876
No 252
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=31.16 E-value=57 Score=23.68 Aligned_cols=31 Identities=6% Similarity=0.080 Sum_probs=21.6
Q ss_pred CCeEEEeCCCch--hhHHHHHHh---------CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY---------GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l---------giP~v~~~~~ 147 (387)
+||+||.|...+ .+..+.+++ .+|.+.++..
T Consensus 58 ~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 58 DYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 799999998766 455555543 2788777653
No 253
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=31.06 E-value=61 Score=24.86 Aligned_cols=28 Identities=21% Similarity=0.189 Sum_probs=23.3
Q ss_pred eeEEEecCCCcCCCHHHHHHHHHHHHhC
Q 040467 278 SVIYVSFGSQNTIAASQMMQLAMALEAC 305 (387)
Q Consensus 278 ~~v~vs~GS~~~~~~~~~~~~~~a~~~~ 305 (387)
..+|+++||......+.++..++++.+.
T Consensus 5 ~~v~i~LGSNlGd~~~~l~~A~~~L~~~ 32 (161)
T 3qbc_A 5 IQAYLGLGSNIGDRESQLNDAIKILNEY 32 (161)
T ss_dssp EEEEEEEEECSSSHHHHHHHHHHHHHHS
T ss_pred cEEEEEEecCccCHHHHHHHHHHHHhcC
Confidence 3799999999877777888888888874
No 254
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=30.92 E-value=42 Score=25.92 Aligned_cols=38 Identities=13% Similarity=0.261 Sum_probs=29.2
Q ss_pred cEEEEEcCCC---cccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 6 ENIVMFPLMA---QGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 6 ~~il~~~~~~---~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.+|+++|.=+ .--..+.-.|++.|.+ +|.+|.|..+|.
T Consensus 31 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~-~G~~V~faIHPV 71 (186)
T 2bru_C 31 HSVIITPGYGMAVAQAQYPVAEITEKLRA-RGINVRFGIHPV 71 (186)
T ss_dssp SEEEEECSBHHHHTTTHHHHHHHHHHHHH-HCCEEEEEECSS
T ss_pred CeEEEECChHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeccc
Confidence 4677776531 1234688999999999 999999999875
No 255
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=30.83 E-value=94 Score=24.11 Aligned_cols=41 Identities=12% Similarity=0.096 Sum_probs=25.6
Q ss_pred CCCccEEEE-EcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 2 AQRKENIVM-FPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 2 ~~~~~~il~-~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
|.+..++++ +....+=... ++.-...|++ .|++|+++++..
T Consensus 4 m~~t~~~v~il~~~gFe~~E-~~~p~~~l~~-ag~~V~~~s~~~ 45 (177)
T 4hcj_A 4 MGKTNNILYVMSGQNFQDEE-YFESKKIFES-AGYKTKVSSTFI 45 (177)
T ss_dssp -CCCCEEEEECCSEEECHHH-HHHHHHHHHH-TTCEEEEEESSS
T ss_pred cccCCCEEEEECCCCccHHH-HHHHHHHHHH-CCCEEEEEECCC
Confidence 333344444 4433443333 5667788999 999999998654
No 256
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=30.70 E-value=27 Score=31.62 Aligned_cols=35 Identities=17% Similarity=0.322 Sum_probs=25.6
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||++..+|+++-.+..| +..|..|++ +|++|+++-
T Consensus 23 M~~~~~dViIIGgG~AG-----l~aA~~La~-~G~~V~llE 57 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAG-----MMCAIEAGK-RGRRVLVID 57 (417)
T ss_dssp -----CCEEEECCSHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred ccCCCCCEEEECcCHHH-----HHHHHHHHH-CCCcEEEEe
Confidence 45556789999887765 668889999 999999995
No 257
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=30.66 E-value=43 Score=28.42 Aligned_cols=33 Identities=6% Similarity=-0.042 Sum_probs=23.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
++|+++- +.|.+ -..++++|.+ +||+|+.++-.
T Consensus 5 ~~ilVtG--atG~i--G~~l~~~L~~-~g~~V~~~~R~ 37 (313)
T 1qyd_A 5 SRVLIVG--GTGYI--GKRIVNASIS-LGHPTYVLFRP 37 (313)
T ss_dssp CCEEEES--TTSTT--HHHHHHHHHH-TTCCEEEECCS
T ss_pred CEEEEEc--CCcHH--HHHHHHHHHh-CCCcEEEEECC
Confidence 4577664 33333 2568899999 99999998743
No 258
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=30.58 E-value=56 Score=26.90 Aligned_cols=34 Identities=15% Similarity=0.092 Sum_probs=25.4
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 6 ~~k~~lVTGas~g---IG~aia~~l~~-~G~~V~~~~r 39 (257)
T 3tpc_A 6 KSRVFIVTGASSG---LGAAVTRMLAQ-EGATVLGLDL 39 (257)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3467777776643 24689999999 9999988763
No 259
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=30.47 E-value=2.3e+02 Score=23.29 Aligned_cols=37 Identities=14% Similarity=-0.119 Sum_probs=25.9
Q ss_pred cEEEEEcCCCcccH-HHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQGHT-IPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~GH~-~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|||+++-.-+.-++ .-+...++.++. .|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~-p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAA-PGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCC-TTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcC-CCCEEEEEeCC
Confidence 46777766655555 566778888887 88888887743
No 260
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=30.46 E-value=1.3e+02 Score=23.05 Aligned_cols=48 Identities=13% Similarity=0.132 Sum_probs=34.5
Q ss_pred HHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCchh---------------hHHHHHHhCCceEEEcch
Q 040467 93 ESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFAW---------------SAEIAQEYGIFNALFVGG 147 (387)
Q Consensus 93 ~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~---------------~~~~a~~lgiP~v~~~~~ 147 (387)
+.+..+...+.+++++. +||.+..+..++. +..++.+.|+|+.-+.+.
T Consensus 46 ~RL~~I~~~l~~~i~~~-------~Pd~vaiE~~F~~~n~~sal~lgqarGv~~la~~~~glpv~eytP~ 108 (166)
T 4ep4_A 46 ERVGRIHARVLEVLHRF-------RPEAVAVEEQFFYRQNELAYKVGWALGAVLVAAFEAGVPVYAYGPM 108 (166)
T ss_dssp HHHHHHHHHHHHHHHHH-------CCSEEEEECCCCSSCSHHHHHHHHHHHHHHHHHHHHTCCEEEECHH
T ss_pred HHHHHHHHHHHHHHHHh-------CCCEEEEeehhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHH
Confidence 44456677888899988 9999988877641 124456789998888653
No 261
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=30.37 E-value=31 Score=30.96 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=27.2
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcE-EEEEe
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYT-ITFVN 41 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~-Vt~~~ 41 (387)
||.+.+|+|+-.+..| +.+|..|++ +|++ |+++-
T Consensus 1 M~~~~dVvIVGaG~aG-----l~~A~~L~~-~G~~~v~v~E 35 (410)
T 3c96_A 1 MSEPIDILIAGAGIGG-----LSCALALHQ-AGIGKVTLLE 35 (410)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHH-TTCSEEEEEE
T ss_pred CCCCCeEEEECCCHHH-----HHHHHHHHh-CCCCeEEEEE
Confidence 4556789999888766 778999999 9999 99995
No 262
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=30.28 E-value=69 Score=25.39 Aligned_cols=36 Identities=17% Similarity=0.045 Sum_probs=29.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
..++++.++..|+-.-+..+++.|++ +|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~-~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQ-EGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHH-TTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHH-CCcEEEEecc
Confidence 34777778888888889999999999 9998877753
No 263
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=30.13 E-value=34 Score=31.03 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=23.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCC--cEEEEEeCCc
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNR--YTITFVNTPS 44 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rG--h~Vt~~~~~~ 44 (387)
||+++-.+..| +..|..|++ +| ++||++...+
T Consensus 4 ~VvIIGgG~aG-----l~aA~~L~~-~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 4 HVVVIGGGVGG-----IATAYNLRN-LMPDLKITLISDRP 37 (430)
T ss_dssp EEEEECSSHHH-----HHHHHHHHH-HCTTCEEEEECSSS
T ss_pred cEEEECCCHHH-----HHHHHHHhc-cCcCCeEEEEcCCC
Confidence 79988877655 456777777 54 9999997654
No 264
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=29.96 E-value=77 Score=23.55 Aligned_cols=38 Identities=11% Similarity=0.031 Sum_probs=25.7
Q ss_pred EEEE-EcCCCcccHHH--HHHHHHHHHhCCCcEE-EEEeCCcc
Q 040467 7 NIVM-FPLMAQGHTIP--FLALALHLENTNRYTI-TFVNTPSN 45 (387)
Q Consensus 7 ~il~-~~~~~~GH~~P--~l~la~~L~~~rGh~V-t~~~~~~~ 45 (387)
+++| +..+-+|.-.. .+.+|.++.+ .||+| +++-..+-
T Consensus 14 ~~~ivv~~~Pyg~~~a~~Al~~A~aala-~g~eV~~VFf~~DG 55 (140)
T 2d1p_A 14 RFAIVVTGPAYGTQQASSAFQFAQALIA-DGHELSSVFFYREG 55 (140)
T ss_dssp EEEEEECSCSSSSSHHHHHHHHHHHHHH-TTCEEEEEEECGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHH-CCCccCEEEEechH
Confidence 3444 44455665554 5788999999 99999 87765443
No 265
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=29.89 E-value=43 Score=29.94 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=29.2
Q ss_pred CCccEEEEEcCCCcccHHH----HHHHHHHHHhCCCcEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIP----FLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P----~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|+||+++..+..+--.- -..++++|.+ .||+|+.+-.
T Consensus 20 m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~-~~~~v~~i~i 62 (386)
T 3e5n_A 20 MRKIRVGLIFGGKSAEHEVSLQSARNILDALDP-QRFEPVLIGI 62 (386)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT-TTEEEEEEEE
T ss_pred cCCceEEEEeccCCCCchhHHHHHHHHHHHhCc-cCCEEEEEEE
Confidence 5688998888875554443 3478888988 9999998864
No 266
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=29.77 E-value=39 Score=29.36 Aligned_cols=40 Identities=10% Similarity=0.069 Sum_probs=30.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC-cchhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP-SNLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~-~~~~~~~~ 51 (387)
+||.|+-.+..| ..+|..|.+ .||+|+++... +..+.+.+
T Consensus 15 ~kI~iIG~G~mG-----~ala~~L~~-~G~~V~~~~r~~~~~~~l~~ 55 (335)
T 1z82_A 15 MRFFVLGAGSWG-----TVFAQMLHE-NGEEVILWARRKEIVDLINV 55 (335)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECSSHHHHHHHHH
T ss_pred CcEEEECcCHHH-----HHHHHHHHh-CCCeEEEEeCCHHHHHHHHH
Confidence 579999998888 478999999 99999998653 33344444
No 267
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=29.76 E-value=2e+02 Score=27.86 Aligned_cols=35 Identities=6% Similarity=-0.045 Sum_probs=25.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLK 47 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~ 47 (387)
+||+.-- |.+ .+.+++++++ .|+++..+.......
T Consensus 30 kILI~g~---Gei--a~~iiraar~-lGi~~vav~s~~d~~ 64 (675)
T 3u9t_A 30 RLLVANR---GEI--ACRVMRSARA-LGIGSVAVHSDIDRH 64 (675)
T ss_dssp EEEECCC---HHH--HHHHHHHHHH-HTCEEEEEECSGGGG
T ss_pred EEEEECC---CHH--HHHHHHHHHH-CCCEEEEEECCCCCC
Confidence 6776543 333 7889999999 999998887654433
No 268
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=29.72 E-value=90 Score=26.01 Aligned_cols=40 Identities=13% Similarity=-0.086 Sum_probs=30.3
Q ss_pred hHHHHHHHHhhhhccCCCCCeEEEeCCCch------hhHHHHHHhCCceEEEc
Q 040467 99 KPHFRKLINGLIDEQNGHKPVCIIADMFFA------WSAEIAQEYGIFNALFV 145 (387)
Q Consensus 99 ~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~------~~~~~a~~lgiP~v~~~ 145 (387)
...+.+++++. +||+|++-..+. .+..+|+++|+|.+...
T Consensus 105 A~~La~~i~~~-------~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt~v 150 (255)
T 1efv_B 105 ARVLAKLAEKE-------KVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGTFA 150 (255)
T ss_dssp HHHHHHHHHHH-------TCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhc-------CCCEEEEeCcccCCchhhHHHHHHHHhCCCcccce
Confidence 34455566665 799999877663 67899999999999864
No 269
>2yw2_A Phosphoribosylamine--glycine ligase; glycinamide ribonucleotide synthetase, GAR synthetase, ATP B purine nucleotide biosynthetic pathway; HET: ATP; 1.80A {Aquifex aeolicus} PDB: 2yya_A
Probab=29.59 E-value=2.8e+02 Score=24.62 Aligned_cols=32 Identities=9% Similarity=0.032 Sum_probs=23.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|+++..++ .+..++..|++..|+++.++.+
T Consensus 1 m~ililG~g~-----r~~~~a~~~~~~~g~~~v~~~~ 32 (424)
T 2yw2_A 1 MKVLVVGNGG-----REHAIAWKVAQSPLVKELYVAK 32 (424)
T ss_dssp CEEEEEESSH-----HHHHHHHHHTTCTTCSEEEEEE
T ss_pred CEEEEECCCH-----HHHHHHHHHhhCCCCCEEEEEC
Confidence 3688888774 3678888887536898877764
No 270
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=29.57 E-value=36 Score=27.74 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=23.8
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEE
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFV 40 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~ 40 (387)
.|+|+-.+-.| +.+|..|++ +|++|+++
T Consensus 4 dV~IIGaGpaG-----L~aA~~La~-~G~~V~v~ 31 (336)
T 3kkj_A 4 PIAIIGTGIAG-----LSAAQALTA-AGHQVHLF 31 (336)
T ss_dssp CEEEECCSHHH-----HHHHHHHHH-TTCCEEEE
T ss_pred CEEEECcCHHH-----HHHHHHHHH-CCCCEEEE
Confidence 37888777655 889999999 99999998
No 271
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=29.51 E-value=44 Score=28.05 Aligned_cols=38 Identities=21% Similarity=0.094 Sum_probs=34.2
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHH--------HHhCC-CcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALH--------LENTN-RYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~--------L~~~r-Gh~Vt~~~~ 42 (387)
++.+|++.+.+.-.|-....-++.. |.. + |++|..+..
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~-~~G~eVi~LG~ 165 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLER-YEMIDAYNLGS 165 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGG-CTTEEEEECCS
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHh-cCCcEEEECCC
Confidence 4678999999999999999999877 999 8 999999875
No 272
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=29.50 E-value=40 Score=27.39 Aligned_cols=19 Identities=11% Similarity=0.113 Sum_probs=16.5
Q ss_pred HHHHHHHHhCCC-cEEEEEeC
Q 040467 23 LALALHLENTNR-YTITFVNT 42 (387)
Q Consensus 23 l~la~~L~~~rG-h~Vt~~~~ 42 (387)
.+|+++|.+ +| |+|+++.-
T Consensus 37 ~~l~~~L~~-~G~~~V~~~~R 56 (236)
T 3qvo_A 37 RHVINQLAD-KQTIKQTLFAR 56 (236)
T ss_dssp HHHHHHHTT-CTTEEEEEEES
T ss_pred HHHHHHHHh-CCCceEEEEEc
Confidence 578999999 99 99998864
No 273
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=29.48 E-value=70 Score=26.46 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=23.5
Q ss_pred EEEEEcCCCc-ccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQ-GHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~-GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++..+. |-+ =.++|++|++ +|++|.++.-
T Consensus 10 k~vlVTGas~~~gI--G~~ia~~l~~-~G~~V~~~~r 43 (265)
T 1qsg_A 10 KRILVTGVASKLSI--AYGIAQAMHR-EGAELAFTYQ 43 (265)
T ss_dssp CEEEECCCCSTTSH--HHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEECCCCCCCH--HHHHHHHHHH-CCCEEEEEcC
Confidence 4666666541 333 3579999999 9999998864
No 274
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=29.30 E-value=61 Score=25.33 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=24.2
Q ss_pred EEEEEcCCCcccHHHHH-HHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFL-ALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l-~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+++-.-..|+..-+. .+++.|.+ .|++|.++...
T Consensus 7 kilii~~S~~g~T~~la~~i~~~l~~-~g~~v~~~~l~ 43 (200)
T 2a5l_A 7 YILVLYYSRHGATAEMARQIARGVEQ-GGFEARVRTVP 43 (200)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHHHH-TTCEEEEEBCC
T ss_pred eEEEEEeCCCChHHHHHHHHHHHHhh-CCCEEEEEEhh
Confidence 45554444478776654 45677888 99999988643
No 275
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=29.23 E-value=51 Score=27.78 Aligned_cols=32 Identities=16% Similarity=0.089 Sum_probs=24.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
.++++++.++.| -=.++|++|++ +|++|.++.
T Consensus 8 gk~vlVTGas~G---IG~aia~~la~-~G~~V~~~~ 39 (280)
T 3tox_A 8 GKIAIVTGASSG---IGRAAALLFAR-EGAKVVVTA 39 (280)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHH-TTCEEEECC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHH-CCCEEEEEE
Confidence 467888777653 24678999999 999988765
No 276
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=29.21 E-value=50 Score=28.24 Aligned_cols=39 Identities=21% Similarity=0.278 Sum_probs=31.2
Q ss_pred ccEEEEEcC--CCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPL--MAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~--~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+.++++++. |+.|-..-...||..|++ .|.+|.++-...
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~-~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQ-SDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHh-CCCcEEEEECCC
Confidence 445555554 688999999999999999 999999986443
No 277
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=29.20 E-value=37 Score=31.13 Aligned_cols=31 Identities=16% Similarity=0.160 Sum_probs=26.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++|.|+-.|..| +.+|..|++ +||+|+++-.
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~-~G~~V~~~D~ 33 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAE-LGANVRCIDT 33 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECS
T ss_pred CEEEEECcCHHH-----HHHHHHHHh-cCCEEEEEEC
Confidence 469999887776 568999999 9999998864
No 278
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=29.17 E-value=63 Score=24.74 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=23.2
Q ss_pred eEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 040467 279 VIYVSFGSQNTIAASQMMQLAMALEACG 306 (387)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~a~~~~~ 306 (387)
.+|+++||......+.++..++++.+.+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLS 30 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCC
Confidence 5899999998777778888888888753
No 279
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=29.13 E-value=21 Score=28.73 Aligned_cols=31 Identities=13% Similarity=0.255 Sum_probs=23.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+++-.+.. -..+|+.|.+ +||+|+++...
T Consensus 2 ~iiIiG~G~~-----G~~la~~L~~-~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETT-----AYYLARSMLS-RKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHH-----HHHHHHHHHH-TTCCEEEEESC
T ss_pred EEEEECCCHH-----HHHHHHHHHh-CCCeEEEEECC
Confidence 5777765433 3578999999 99999999743
No 280
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=29.13 E-value=25 Score=32.41 Aligned_cols=32 Identities=25% Similarity=0.294 Sum_probs=27.0
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.|||+++-.+-.|. .||+.|.+ .||+|+++=.
T Consensus 3 ~M~iiI~G~G~vG~-----~la~~L~~-~~~~v~vId~ 34 (461)
T 4g65_A 3 AMKIIILGAGQVGG-----TLAENLVG-ENNDITIVDK 34 (461)
T ss_dssp CEEEEEECCSHHHH-----HHHHHTCS-TTEEEEEEES
T ss_pred cCEEEEECCCHHHH-----HHHHHHHH-CCCCEEEEEC
Confidence 57899998887664 69999999 9999999953
No 281
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=29.02 E-value=53 Score=28.13 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=26.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||.|+-.+..|. ++|+.|.+ +||+|++.-
T Consensus 5 kIgfIGlG~MG~-----~mA~~L~~-~G~~v~v~d 33 (300)
T 3obb_A 5 QIAFIGLGHMGA-----PMATNLLK-AGYLLNVFD 33 (300)
T ss_dssp EEEEECCSTTHH-----HHHHHHHH-TTCEEEEEC
T ss_pred EEEEeeehHHHH-----HHHHHHHh-CCCeEEEEc
Confidence 699999999985 68999999 999999985
No 282
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=28.98 E-value=1.1e+02 Score=29.62 Aligned_cols=39 Identities=21% Similarity=0.071 Sum_probs=25.1
Q ss_pred HHHHHHhhhhccCCCCCeEEEeCCCc-hhhHHHHHHhCCceEEEcch
Q 040467 102 FRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFVGG 147 (387)
Q Consensus 102 ~~~ll~~~~~~~~~~~pD~vV~D~~~-~~~~~~a~~lgiP~v~~~~~ 147 (387)
+.+.++++ +||+||+=.+. .....+-+.....++-+.++
T Consensus 67 ~~~~l~~~-------~~d~iv~~~~~~il~~~~l~~~~~~~iNiH~s 106 (660)
T 1z7e_A 67 WVERIAQL-------SPDVIFSFYYRHLIYDEILQLAPAGAFNLHGS 106 (660)
T ss_dssp HHHHHHHH-------CCSEEEEESCCSCCCHHHHTTCTTCEEEEESS
T ss_pred HHHHHHhc-------CCCEEEEcCcccccCHHHHhcCCCCeEEecCC
Confidence 44566777 89998875543 35556666666666776654
No 283
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=28.94 E-value=25 Score=31.55 Aligned_cols=30 Identities=7% Similarity=0.014 Sum_probs=24.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCC-CcEEEEEe
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTN-RYTITFVN 41 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~ 41 (387)
++|.|+-.|+.|. .+|..|++ + ||+|+++.
T Consensus 3 mkI~ViGaG~~G~-----~~a~~La~-~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAH-----TLSGLAAS-RDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHH-----HHHHHHTT-STTEEEEEEC
T ss_pred ceEEEECCCHHHH-----HHHHHHHh-CCCCEEEEEe
Confidence 3699999988886 56888877 6 99999986
No 284
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=28.87 E-value=47 Score=29.57 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=27.9
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|++.+|+|+-.+..| +.+|..|++ +|++|+++-
T Consensus 24 ~~~~dV~IVGaG~aG-----l~~A~~L~~-~G~~v~v~E 56 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVG-----LTMAKLLQQ-NGIDVSVYE 56 (398)
T ss_dssp CTTCEEEEECCSHHH-----HHHHHHHHT-TTCEEEEEE
T ss_pred cCCCCEEEECCCHHH-----HHHHHHHHH-CCCCEEEEe
Confidence 445689999888766 778999999 999999995
No 285
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=28.76 E-value=52 Score=26.85 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=32.7
Q ss_pred hHHHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEEcc
Q 040467 99 KPHFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 99 ~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~ 146 (387)
.+.+++.++++... ..|+||.|.. ...+|+++|+|.+.+..
T Consensus 140 ~ee~~~~i~~l~~~----G~~vVVG~~~---~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN----GTEAVVGAGL---ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT----TCCEEEESHH---HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC----CCCEEECCHH---HHHHHHHcCCcEEEECC
Confidence 45667777777655 7999999864 57889999999999874
No 286
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=28.76 E-value=45 Score=28.86 Aligned_cols=37 Identities=19% Similarity=0.364 Sum_probs=27.5
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCc-EEEEEeCC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRY-TITFVNTP 43 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh-~Vt~~~~~ 43 (387)
|||+..||.++-. |++ -..+|..|+. +|+ +|+++-..
T Consensus 4 m~~~~~kv~ViGa---G~v--G~~ia~~l~~-~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGA---GFT--GATTAFLLAQ-KELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECC---SHH--HHHHHHHHHH-TTCCEEEEECCG
T ss_pred cccCCCEEEEECC---CHH--HHHHHHHHHh-CCCCeEEEEecc
Confidence 6677778999875 444 2457888889 999 99998654
No 287
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=28.74 E-value=2.7e+02 Score=23.71 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=26.2
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCc--EEEEEeCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRY--TITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh--~Vt~~~~~ 43 (387)
.++|.|+-.|..| ..+|+.|++ +|+ +|+++...
T Consensus 33 ~~kI~IIG~G~mG-----~slA~~l~~-~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 33 MQNVLIVGVGFMG-----GSFAKSLRR-SGFKGKIYGYDIN 67 (314)
T ss_dssp CSEEEEESCSHHH-----HHHHHHHHH-TTCCSEEEEECSC
T ss_pred CCEEEEEeeCHHH-----HHHHHHHHh-CCCCCEEEEEECC
Confidence 3589999887776 468999999 999 88887543
No 288
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=28.57 E-value=43 Score=28.28 Aligned_cols=37 Identities=8% Similarity=0.081 Sum_probs=29.9
Q ss_pred EEEEEcC--CCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 7 NIVMFPL--MAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 7 ~il~~~~--~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+++.+.. ++.|-..-...||..|++ +|++|.++=...
T Consensus 5 kvI~v~s~KGGvGKTT~a~nLA~~La~-~G~~VlliD~D~ 43 (286)
T 2xj4_A 5 RVIVVGNEKGGAGKSTIAVHLVTALLY-GGAKVAVIDLDL 43 (286)
T ss_dssp EEEEECCSSSCTTHHHHHHHHHHHHHH-TTCCEEEEECCT
T ss_pred eEEEEEcCCCCCCHHHHHHHHHHHHHH-CCCcEEEEECCC
Confidence 3444443 688999999999999999 999999986444
No 289
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=28.57 E-value=83 Score=26.28 Aligned_cols=35 Identities=6% Similarity=0.103 Sum_probs=25.1
Q ss_pred cEEEEEcCCC--cccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 6 ENIVMFPLMA--QGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 6 ~~il~~~~~~--~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.++++++.++ .| -=.++|++|++ +|++|.++.-..
T Consensus 26 ~k~vlVTGasg~~G---IG~~ia~~l~~-~G~~V~~~~r~~ 62 (280)
T 3nrc_A 26 GKKILITGLLSNKS---IAYGIAKAMHR-EGAELAFTYVGQ 62 (280)
T ss_dssp TCEEEECCCCSTTC---HHHHHHHHHHH-TTCEEEEEECTT
T ss_pred CCEEEEECCCCCCC---HHHHHHHHHHH-cCCEEEEeeCch
Confidence 3577777744 22 13679999999 999999887544
No 290
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=28.50 E-value=26 Score=30.37 Aligned_cols=36 Identities=11% Similarity=-0.050 Sum_probs=27.4
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCC----cEEEEEeCC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNR----YTITFVNTP 43 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rG----h~Vt~~~~~ 43 (387)
||.+++|.|+-.|..|. .+|..|.+ .| |+|+++...
T Consensus 19 ~~~~mkI~iIG~G~mG~-----ala~~L~~-~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAF-----ALAKGFTA-AGVLAAHKIMASSPD 58 (322)
T ss_dssp ---CCCEEEESCSHHHH-----HHHHHHHH-TTSSCGGGEEEECSC
T ss_pred ccCCCEEEEECCCHHHH-----HHHHHHHH-CCCCCcceEEEECCC
Confidence 55667899999888775 57888999 99 999988643
No 291
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=28.46 E-value=2.3e+02 Score=22.65 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=32.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHH-HhCCCcEEEEEeCCcchhhh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHL-ENTNRYTITFVNTPSNLKKL 49 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L-~~~rGh~Vt~~~~~~~~~~~ 49 (387)
-+++..-|+.|-..-.+.+|... .+ .|..|.+++.+...+.+
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~-~~~~v~~~s~E~~~~~~ 74 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEE-YGEPGVFVTLEERARDL 74 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHH-HCCCEEEEESSSCHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHh-cCCCceeecccCCHHHH
Confidence 46777788999999999988764 55 68889999877655443
No 292
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=28.26 E-value=35 Score=30.54 Aligned_cols=36 Identities=14% Similarity=0.285 Sum_probs=27.4
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|++.+.+|+|+-.+..| +.+|..|++ +|++|+++--
T Consensus 1 M~~~~~dVvIIGgG~aG-----l~~A~~La~-~G~~V~v~E~ 36 (421)
T 3nix_A 1 MQREKVDVLVIGAGPAG-----TVAASLVNK-SGFKVKIVEK 36 (421)
T ss_dssp ---CEEEEEEECCSHHH-----HHHHHHHHT-TTCCEEEECS
T ss_pred CCCccCcEEEECCCHHH-----HHHHHHHHh-CCCCEEEEeC
Confidence 44445789999888755 678889999 9999999953
No 293
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=28.20 E-value=55 Score=23.07 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=24.1
Q ss_pred EEEEEcCCCcccHHHHH---HHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFL---ALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l---~la~~L~~~rGh~Vt~~~~ 42 (387)
+|+.++....|=...++ .|=++-.+ +||+|.+=+.
T Consensus 4 kivaVtaCptGiAhTymAAeaLekaA~~-~G~~ikVEtq 41 (106)
T 2m1z_A 4 KIIAVTACATGVAHTYMAAQALKKGAKK-MGNLIKVETQ 41 (106)
T ss_dssp EEEEEEECSSCHHHHHHHHHHHHHHHHH-HTCEEEEEEE
T ss_pred cEEEEEECCCcHHHHHHHHHHHHHHHHH-CCCEEEEEEe
Confidence 58888665555555555 55555567 9999999873
No 294
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=28.13 E-value=2.3e+02 Score=22.69 Aligned_cols=102 Identities=8% Similarity=0.073 Sum_probs=56.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhC-CCcEEEEEeCC-cch---hhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENT-NRYTITFVNTP-SNL---KKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSD 81 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~-rGh~Vt~~~~~-~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 81 (387)
||+++.++. | ..+.+|..+..+- -..+|.++.+. ... ++.++ .++.+..++.. .+..
T Consensus 4 riavl~Sg~-G--snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~-----~gIp~~~~~~~----~~~~------ 65 (211)
T 3p9x_A 4 RVAIFASGS-G--TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKV-----HEIPVCALDPK----TYPS------ 65 (211)
T ss_dssp EEEEECCTT-C--HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHT-----TTCCEEECCGG----GSSS------
T ss_pred EEEEEEeCC-c--hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHH-----cCCCEEEeChh----hcCc------
Confidence 699998886 4 2356666665441 22577766542 222 23444 66777655421 0000
Q ss_pred CCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 82 SLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
-+...+.+.+.+++. +||+||+=.+.. ....+-+.....++-+.+
T Consensus 66 -------------r~~~d~~~~~~l~~~-------~~Dliv~agy~~Il~~~~l~~~~~~~iNiHp 111 (211)
T 3p9x_A 66 -------------KEAYEIEVVQQLKEK-------QIDFVVLAGYMRLVGPTLLGAYEGRIVNIHP 111 (211)
T ss_dssp -------------HHHHHHHHHHHHHHT-------TCCEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred -------------hhhhHHHHHHHHHhc-------CCCEEEEeCchhhcCHHHHhhccCCeEEECC
Confidence 012234556677777 899999776543 555666666666666643
No 295
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=28.09 E-value=68 Score=24.49 Aligned_cols=28 Identities=25% Similarity=0.251 Sum_probs=22.3
Q ss_pred eEEEecCCCcCCCHHHHHHHHHHHHhCC
Q 040467 279 VIYVSFGSQNTIAASQMMQLAMALEACG 306 (387)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~a~~~~~ 306 (387)
+.|+++||......+.++..++++.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999998666777888888887753
No 296
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=28.06 E-value=2e+02 Score=23.18 Aligned_cols=64 Identities=20% Similarity=0.217 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhH
Q 040467 295 MMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNS 374 (387)
Q Consensus 295 ~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s 374 (387)
-.++++.+++.+..+++..+.. .-+|+.+....+ ..-+-+ |+++ .=-.-|.+.
T Consensus 78 d~~~~~~l~~~~~Dlivlagy~------------~iL~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~p 130 (215)
T 3da8_A 78 DVAITAATAAHEPDLVVSAGFM------------RILGPQFLSRFY--GRTLNT-----------HPAL--LPAFPGTHG 130 (215)
T ss_dssp HHHHHHHHHTTCCSEEEEEECC------------SCCCHHHHHHHT--TTEEEE-----------ESSC--TTSSCSTTH
T ss_pred hHHHHHHHHhhCCCEEEEcCch------------hhCCHHHHhhcc--CCeEEe-----------Cccc--ccCCCCchH
Confidence 4458888889899999998876 237787777654 222223 3332 223468899
Q ss_pred HHHHHHcCCcc
Q 040467 375 VLEALSHRVPI 385 (387)
Q Consensus 375 ~~eal~~GvP~ 385 (387)
+..|+.+|+..
T Consensus 131 i~~Ai~~G~~~ 141 (215)
T 3da8_A 131 VADALAYGVKV 141 (215)
T ss_dssp HHHHHHHTCSE
T ss_pred HHHHHHcCCCe
Confidence 99999999764
No 297
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=28.00 E-value=51 Score=30.30 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=27.8
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
.++.+|+++-.+..| +..|..|++ +|++|+++-
T Consensus 9 ~~~~~v~IIGaG~aG-----l~aA~~L~~-~g~~v~v~E 41 (489)
T 2jae_A 9 KGSHSVVVLGGGPAG-----LCSAFELQK-AGYKVTVLE 41 (489)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEC
T ss_pred cCCCCEEEECCCHHH-----HHHHHHHHH-CCCCEEEEe
Confidence 446789999988766 778999999 999999984
No 298
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=27.94 E-value=62 Score=28.24 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=20.9
Q ss_pred CCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 117 KPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
+||+||...... ....+.+.+|||++.+..
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~ 126 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLSY 126 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEECC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEec
Confidence 899999865432 223455778999998753
No 299
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=27.92 E-value=92 Score=22.28 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=23.1
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|+|++++|+++- .|-.-...+...|.+ .|++|..+.
T Consensus 1 M~~~~~~ilivd----d~~~~~~~l~~~L~~-~g~~v~~~~ 36 (140)
T 3h5i_A 1 MSLKDKKILIVE----DSKFQAKTIANILNK-YGYTVEIAL 36 (140)
T ss_dssp -----CEEEEEC----SCHHHHHHHHHHHHH-TTCEEEEES
T ss_pred CCCCCcEEEEEe----CCHHHHHHHHHHHHH-cCCEEEEec
Confidence 566777888875 455566677888888 898887654
No 300
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=27.78 E-value=43 Score=28.40 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=27.8
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+.+|+++-.+..| +..|..|++ +|++|+++-..
T Consensus 15 ~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAA-----YGAALYSAR-YMLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESS
T ss_pred ccCEEEECccHHH-----HHHHHHHHH-CCCcEEEEecc
Confidence 3589999988877 788999999 99999999643
No 301
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.72 E-value=63 Score=27.27 Aligned_cols=34 Identities=12% Similarity=0.109 Sum_probs=25.7
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~-~G~~V~~~~r 44 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSS-NGIMVVLTCR 44 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCcEEEEecCCch---HHHHHHHHHHH-CCCEEEEEeC
Confidence 4467788877654 34688999999 9999998864
No 302
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=27.70 E-value=50 Score=29.06 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=26.6
Q ss_pred CCccEEEEEcCCCc-cc---HHHHHHHHHHHHhCCCcEEEEEe
Q 040467 3 QRKENIVMFPLMAQ-GH---TIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 3 ~~~~~il~~~~~~~-GH---~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|+|.||+++..|.. =| +..-..++++|.+ .||+|..+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~-~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINT-NKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCT-TTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhH-hCCEEEEEE
Confidence 45668988865533 34 3345578899999 999999874
No 303
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=27.59 E-value=1e+02 Score=21.57 Aligned_cols=36 Identities=11% Similarity=0.185 Sum_probs=26.8
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+.+|++++..+.|--.-.-.+=+.+.+ +|.++.+-.
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~-~gi~~~i~a 38 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEK-YEVPVIIEA 38 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHH-SCCSEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHH-CCCCeEEEE
Confidence 347888888766555556688888889 998877664
No 304
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=27.53 E-value=66 Score=27.56 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=26.6
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++|.|+-.+..| ..+|+.|++ +||+|+++..
T Consensus 21 m~~I~iIG~G~mG-----~~~A~~l~~-~G~~V~~~dr 52 (310)
T 3doj_A 21 MMEVGFLGLGIMG-----KAMSMNLLK-NGFKVTVWNR 52 (310)
T ss_dssp SCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHH-CCCeEEEEeC
Confidence 3579999888777 568999999 9999999864
No 305
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=27.53 E-value=94 Score=24.47 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=25.5
Q ss_pred EE-EEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NI-VMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~i-l~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|| +|+..+...+-.....+++.|++ .|++|.++.
T Consensus 108 riiil~~~~~~~~~~~~~~~a~~lk~-~gi~v~~Ig 142 (192)
T 2x5n_A 108 RIVAFVGSPIVEDEKNLIRLAKRMKK-NNVAIDIIH 142 (192)
T ss_dssp EEEEEECSCCSSCHHHHHHHHHHHHH-TTEEEEEEE
T ss_pred eEEEEEECCCCCCchhHHHHHHHHHH-CCCEEEEEE
Confidence 44 45555555567778889999999 999998876
No 306
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=27.42 E-value=76 Score=25.49 Aligned_cols=29 Identities=14% Similarity=0.062 Sum_probs=23.6
Q ss_pred CCeEEEeCCCchhhHHHHHHhCCceEEEc
Q 040467 117 KPVCIIADMFFAWSAEIAQEYGIFNALFV 145 (387)
Q Consensus 117 ~pD~vV~D~~~~~~~~~a~~lgiP~v~~~ 145 (387)
+.-+||++.-...+...|++.|||+..+.
T Consensus 29 ~I~~Vvs~~~~~~~~~~A~~~gIp~~~~~ 57 (209)
T 1meo_A 29 QIDIVISNKAAVAGLDKAERAGIPTRVIN 57 (209)
T ss_dssp EEEEEEESSTTCHHHHHHHHTTCCEEECC
T ss_pred EEEEEEeCCCChHHHHHHHHcCCCEEEEC
Confidence 45678888877778888999999988764
No 307
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=27.40 E-value=2.1e+02 Score=25.80 Aligned_cols=31 Identities=3% Similarity=-0.017 Sum_probs=23.3
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+++.. | ...+.+++++++ .|++|.++.+.
T Consensus 3 ~ilI~g~---g--~~~~~i~~a~~~-~G~~vv~v~~~ 33 (451)
T 2vpq_A 3 KVLIANR---G--EIAVRIIRACRD-LGIQTVAIYSE 33 (451)
T ss_dssp EEEECCC---H--HHHHHHHHHHHH-TTCEEEEEEEG
T ss_pred eEEEeCC---C--HHHHHHHHHHHH-cCCEEEEEecc
Confidence 5776642 3 356789999999 99999988653
No 308
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=27.30 E-value=93 Score=25.93 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=27.0
Q ss_pred CeeEEEecCCCcCCCHH-HHHHHHHHHHh--CCCcEEEEEc
Q 040467 277 NSVIYVSFGSQNTIAAS-QMMQLAMALEA--CGKNFIWVVK 314 (387)
Q Consensus 277 ~~~v~vs~GS~~~~~~~-~~~~~~~a~~~--~~~~~l~~~~ 314 (387)
+.+++|++||......+ .+..+.+.+++ .+..+-|...
T Consensus 3 ~aillv~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~ 43 (264)
T 2xwp_A 3 KALLVVSFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFT 43 (264)
T ss_dssp EEEEEEECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehh
Confidence 35899999997655445 66667777765 4677878773
No 309
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=27.28 E-value=51 Score=26.75 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=30.2
Q ss_pred cEEEEEc--CCCcccHHHHHHHHHHHHhCC-CcEEEEEeCCc
Q 040467 6 ENIVMFP--LMAQGHTIPFLALALHLENTN-RYTITFVNTPS 44 (387)
Q Consensus 6 ~~il~~~--~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~~~~ 44 (387)
++++.+. -++.|-..-...||..|++ + |++|.++=...
T Consensus 4 ~~vI~v~s~kGGvGKTt~a~~LA~~la~-~~g~~VlliD~D~ 44 (245)
T 3ea0_A 4 KRVFGFVSAKGGDGGSCIAANFAFALSQ-EPDIHVLAVDISL 44 (245)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHTT-STTCCEEEEECCT
T ss_pred CeEEEEECCCCCcchHHHHHHHHHHHHh-CcCCCEEEEECCC
Confidence 3444443 3688999999999999999 8 99999996543
No 310
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=27.13 E-value=1.3e+02 Score=23.52 Aligned_cols=40 Identities=8% Similarity=0.067 Sum_probs=26.6
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
||++ ||+|+..+... ..-+......|.+ .|++|++++...
T Consensus 1 mm~~--~v~ill~~g~~-~~e~~~~~~~l~~-ag~~v~~vs~~~ 40 (197)
T 2rk3_A 1 MASK--RALVILAKGAE-EMETVIPVDVMRR-AGIKVTVAGLAG 40 (197)
T ss_dssp -CCC--EEEEEECTTCC-HHHHHHHHHHHHH-TTCEEEEEETTC
T ss_pred CCCC--EEEEEECCCCc-HHHHHHHHHHHHH-CCCEEEEEEcCC
Confidence 5554 46666665443 3445567788999 999999998653
No 311
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=27.12 E-value=67 Score=25.25 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=22.4
Q ss_pred EEEEEcCCC--cccHHHHHH-HHHH-HHhCCCcEEEEEe
Q 040467 7 NIVMFPLMA--QGHTIPFLA-LALH-LENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~--~GH~~P~l~-la~~-L~~~rGh~Vt~~~ 41 (387)
+|+++..-. .|+..-+.. +++. |.+ +|++|.++-
T Consensus 4 kilii~gS~r~~g~t~~la~~i~~~~l~~-~g~~v~~~d 41 (197)
T 2vzf_A 4 SIVAISGSPSRNSTTAKLAEYALAHVLAR-SDSQGRHIH 41 (197)
T ss_dssp EEEEEECCSSTTCHHHHHHHHHHHHHHHH-SSEEEEEEE
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHH-CCCeEEEEE
Confidence 366554432 477666665 4566 788 899998875
No 312
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=27.09 E-value=1.4e+02 Score=23.28 Aligned_cols=38 Identities=8% Similarity=0.050 Sum_probs=28.8
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
.++|+|+..+... ..-+......|.+ .|++|++++...
T Consensus 23 ~~kV~ill~~g~~-~~e~~~~~~~l~~-ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFE-DSEFTSPADEFRK-AGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBC-THHHHHHHHHHHH-TTCEEEEEESST
T ss_pred CCEEEEEECCCCC-HHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 4578888887654 3445667788999 999999998654
No 313
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=27.01 E-value=58 Score=25.97 Aligned_cols=32 Identities=19% Similarity=0.246 Sum_probs=25.6
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+++|.|+-.+..| ..+|..|++ +||+|+++..
T Consensus 19 ~~~I~iiG~G~mG-----~~la~~l~~-~g~~V~~~~~ 50 (209)
T 2raf_A 19 GMEITIFGKGNMG-----QAIGHNFEI-AGHEVTYYGS 50 (209)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECT
T ss_pred CCEEEEECCCHHH-----HHHHHHHHH-CCCEEEEEcC
Confidence 3579999877777 567899999 9999998853
No 314
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=26.95 E-value=66 Score=27.93 Aligned_cols=40 Identities=8% Similarity=-0.040 Sum_probs=31.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcch
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNL 46 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~ 46 (387)
.+|++.++|..|+-+-.-.++..|.. -|.+|++++|+.+.
T Consensus 169 l~ia~a~~~~vGD~rva~Sl~~~~~~-~G~~v~~~~P~~~~ 208 (324)
T 1js1_X 169 VVMTWAPHPRPLPQAVPNSFAEWMNA-TDYEFVITHPEGYE 208 (324)
T ss_dssp EEEECCCCSSCCCSHHHHHHHHHHHT-SSSEEEEECCTTCC
T ss_pred EEEEEEcccccCCcchHHHHHHHHHH-CCCEEEEeCCcccC
Confidence 56777777888887777778888888 89999999887664
No 315
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=26.92 E-value=83 Score=26.64 Aligned_cols=39 Identities=21% Similarity=0.393 Sum_probs=29.1
Q ss_pred CCccEEEEEcCCCcccHHHH--HHHHHHHHhCCC-cEEEEEeCC
Q 040467 3 QRKENIVMFPLMAQGHTIPF--LALALHLENTNR-YTITFVNTP 43 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~--l~la~~L~~~rG-h~Vt~~~~~ 43 (387)
.++.|||+++- ..+|-.+. -.|++.|.+ .| .+|++...+
T Consensus 2 ~~~~kvLiv~G-~~~H~~~~~~~~l~~~l~~-~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITG-QNNHNWQVSHVVLKQILEN-SGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEES-CCSSCHHHHHHHHHHHHHH-TTSEEEEEEECC
T ss_pred CCceEEEEEcC-CCCCChHHHHHHHHHHHHh-cCCEEEEEEeCC
Confidence 35789999944 44886443 577788888 88 999999764
No 316
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=26.85 E-value=2e+02 Score=25.05 Aligned_cols=38 Identities=5% Similarity=-0.094 Sum_probs=33.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeCCcc
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNTPSN 45 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~~~~ 45 (387)
.+++.-.|+.|-..-.+.++.+.++ + |..|.|+.++..
T Consensus 30 iteI~G~pGsGKTtL~Lq~~~~~~~-~g~g~~vlyId~E~s 69 (333)
T 3io5_A 30 LLILAGPSKSFKSNFGLTMVSSYMR-QYPDAVCLFYDSEFG 69 (333)
T ss_dssp EEEEEESSSSSHHHHHHHHHHHHHH-HCTTCEEEEEESSCC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHh-cCCCceEEEEeccch
Confidence 5788888999999999999999988 7 899999987664
No 317
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=26.82 E-value=69 Score=26.61 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=28.5
Q ss_pred ccEEEEEc-CC-CcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 5 KENIVMFP-LM-AQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 5 ~~~il~~~-~~-~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+++.+|++ .. ..|-..-.+.|++.|++ +|++|.++-
T Consensus 25 ~m~~i~Itgt~t~vGKT~vt~gL~~~l~~-~G~~V~~fK 62 (251)
T 3fgn_A 25 HMTILVVTGTGTGVGKTVVCAALASAARQ-AGIDVAVCK 62 (251)
T ss_dssp SCEEEEEEESSTTSCHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHH-CCCeEEEEe
Confidence 34444444 43 66999999999999999 999999986
No 318
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=26.65 E-value=60 Score=30.13 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=32.0
Q ss_pred ccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEecc
Q 040467 17 GHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIP 65 (387)
Q Consensus 17 GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~ 65 (387)
.+=.-++.+|+.|.+ .|+++. ++......+++ .|+....+.
T Consensus 32 ~DK~glv~~Ak~L~~-lGfeI~--ATgGTak~L~e-----~GI~v~~V~ 72 (534)
T 4ehi_A 32 SDKEGIVEFGKELEN-LGFEIL--STGGTFKLLKE-----NGIKVIEVS 72 (534)
T ss_dssp SSCTTHHHHHHHHHH-TTCEEE--ECHHHHHHHHH-----TTCCCEECB
T ss_pred cccccHHHHHHHHHH-CCCEEE--EccHHHHHHHH-----CCCceeehh
Confidence 455568999999999 998764 67788889999 666666654
No 319
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=26.62 E-value=36 Score=31.67 Aligned_cols=32 Identities=9% Similarity=0.075 Sum_probs=27.1
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.+|+|+-.+..| +.+|..|++ +|++|+++-.
T Consensus 7 ~~dVvIVGgG~aG-----l~aA~~La~-~G~~V~liE~ 38 (512)
T 3e1t_A 7 VFDLIVIGGGPGG-----STLASFVAM-RGHRVLLLER 38 (512)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHT-TTCCEEEECS
T ss_pred cCCEEEECcCHHH-----HHHHHHHHh-CCCCEEEEcc
Confidence 4689999888777 778889999 9999999953
No 320
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=26.53 E-value=33 Score=29.43 Aligned_cols=32 Identities=6% Similarity=0.045 Sum_probs=27.0
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.+|+++-.+..| +..|..|++ +|++|+++-.
T Consensus 22 ~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~vie~ 53 (338)
T 3itj_A 22 HNKVTIIGSGPAA-----HTAAIYLAR-AEIKPILYEG 53 (338)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHH-TTCCCEEECC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHH-CCCCEEEEec
Confidence 4689999888766 688999999 9999999954
No 321
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=26.41 E-value=95 Score=26.14 Aligned_cols=37 Identities=11% Similarity=0.017 Sum_probs=26.9
Q ss_pred cEEEEEcCCCc-ccHH---HHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPLMAQ-GHTI---PFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~~~~-GH~~---P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
++|+++..+.. -|-. ....++++|.+ +||+|.++...
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~-~G~~v~~~~~~ 43 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLRE-GGIDAYPVDPK 43 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHH-TTCEEEEECTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHH-CCCeEEEEecC
Confidence 46888876532 2322 34679999999 99999998765
No 322
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=26.31 E-value=70 Score=26.91 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=25.9
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 27 ~~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~r 60 (283)
T 3v8b_A 27 PSPVALITGAGSG---IGRATALALAA-DGVTVGALGR 60 (283)
T ss_dssp CCCEEEEESCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3467777777653 34688999999 9999998864
No 323
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=26.21 E-value=36 Score=29.42 Aligned_cols=22 Identities=14% Similarity=0.067 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCc
Q 040467 22 FLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 22 ~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
-.++|+++.+ +|++|+++..+.
T Consensus 68 G~aiAe~~~~-~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 68 GATSAEAFLA-AGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHH-TTCEEEEEEETT
T ss_pred HHHHHHHHHH-CCCEEEEEecCC
Confidence 3578999999 999999998643
No 324
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=26.16 E-value=87 Score=25.53 Aligned_cols=40 Identities=18% Similarity=-0.012 Sum_probs=26.8
Q ss_pred HHHHHHHhhhhccCCCCCeEEEeCCCchh---h----HHHHHHhCCceEEEc
Q 040467 101 HFRKLINGLIDEQNGHKPVCIIADMFFAW---S----AEIAQEYGIFNALFV 145 (387)
Q Consensus 101 ~~~~ll~~~~~~~~~~~pD~vV~D~~~~~---~----~~~a~~lgiP~v~~~ 145 (387)
.+.++++++.. +||+|++|-.-.. . ..+...+++|.|.+.
T Consensus 92 ~~l~al~~L~~-----~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 92 LFLKAWEKLRT-----KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHTTCCS-----CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHhcCC-----CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 44455666522 6999999987664 2 234555689999874
No 325
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=26.11 E-value=1e+02 Score=21.90 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=20.9
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-------CCceEEEcc
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-------GIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-------giP~v~~~~ 146 (387)
+||+||.|.... .+..+.+.+ .+|.+.++.
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~ 85 (138)
T 3c3m_A 47 PPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTA 85 (138)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEEC
Confidence 799999998765 355555443 578877754
No 326
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=26.09 E-value=93 Score=24.47 Aligned_cols=34 Identities=9% Similarity=0.073 Sum_probs=28.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
.++++.++..|...-+..+++.|++ +|+.|..+-
T Consensus 29 p~vv~~hG~~~~~~~~~~~~~~l~~-~g~~v~~~d 62 (236)
T 1zi8_A 29 PVIVIAQDIFGVNAFMRETVSWLVD-QGYAAVCPD 62 (236)
T ss_dssp EEEEEECCTTBSCHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CEEEEEcCCCCCCHHHHHHHHHHHh-CCcEEEecc
Confidence 4667777777888889999999999 999887764
No 327
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=25.94 E-value=75 Score=25.78 Aligned_cols=34 Identities=3% Similarity=-0.107 Sum_probs=24.3
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.+.++++..+.| -=.++|++|++ +|++|.++.-
T Consensus 6 ~~k~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~r 39 (241)
T 1dhr_A 6 EARRVLVYGGRGA---LGSRCVQAFRA-RNWWVASIDV 39 (241)
T ss_dssp CCCEEEEETTTSH---HHHHHHHHHHT-TTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHh-CCCEEEEEeC
Confidence 3456666655543 34688999999 9999998763
No 328
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=25.93 E-value=50 Score=27.88 Aligned_cols=31 Identities=3% Similarity=0.174 Sum_probs=25.3
Q ss_pred cEEEEEcC-CCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPL-MAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~-~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++|.|+-. |..| ..+|+.|.+ +||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~-~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHD-SAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHH-SSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHh-CCCEEEEEEC
Confidence 47999988 7777 457899999 9999998753
No 329
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=25.92 E-value=51 Score=26.25 Aligned_cols=32 Identities=19% Similarity=0.175 Sum_probs=22.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+++- +.|-+ =..++++|.+ +||+|+.+.-.
T Consensus 2 ~ilItG--atG~i--G~~l~~~L~~-~g~~V~~~~R~ 33 (219)
T 3dqp_A 2 KIFIVG--STGRV--GKSLLKSLST-TDYQIYAGARK 33 (219)
T ss_dssp EEEEES--TTSHH--HHHHHHHHTT-SSCEEEEEESS
T ss_pred eEEEEC--CCCHH--HHHHHHHHHH-CCCEEEEEECC
Confidence 466654 22322 2588999999 99999998743
No 330
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=25.88 E-value=59 Score=28.20 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=21.2
Q ss_pred CCeEEEeCCCchhhHHHHHHhCCceEEEcc
Q 040467 117 KPVCIIADMFFAWSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~~~~~~a~~lgiP~v~~~~ 146 (387)
+||+||..........--++.|+|++.+.+
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 899999876433334444667999998864
No 331
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=25.82 E-value=58 Score=27.80 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=25.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||.|+-.+..|. ++|+.|.+ +||+|+++-
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~-~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLE-AGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHH-TTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHH-CCCeEEEEe
Confidence 699999999885 68999999 999999874
No 332
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=25.81 E-value=46 Score=30.43 Aligned_cols=36 Identities=6% Similarity=-0.013 Sum_probs=28.3
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|++.+..|+++-.+..| +..|..|++ +|++|+++-.
T Consensus 1 M~~~~~DVvVIGaG~aG-----l~aA~~la~-~G~~V~liEk 36 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGG-----VRSGRLAAA-LGKKVAIAEE 36 (463)
T ss_dssp --CCSEEEEEECCSHHH-----HHHHHHHHT-TTCCEEEEES
T ss_pred CCCCCCcEEEECcCHHH-----HHHHHHHHh-CCCEEEEEeC
Confidence 33335689999888777 788999999 9999999964
No 333
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=25.81 E-value=95 Score=25.69 Aligned_cols=33 Identities=12% Similarity=0.010 Sum_probs=25.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~-~G~~V~~~~r 42 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVA-EGANVLINGR 42 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 467777776643 24678999999 9999998864
No 334
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=25.74 E-value=61 Score=29.81 Aligned_cols=35 Identities=11% Similarity=0.015 Sum_probs=27.3
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~ 42 (387)
|++.++|.|+-.|..| ..+|..|++ + ||+|+++..
T Consensus 2 M~~~mkI~VIG~G~mG-----~~lA~~La~-~g~G~~V~~~d~ 38 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVG-----GPTCSVIAH-MCPEIRVTVVDV 38 (467)
T ss_dssp CCCCCEEEEECCSTTH-----HHHHHHHHH-HCTTSEEEEECS
T ss_pred CCCccEEEEECCCHHH-----HHHHHHHHh-cCCCCEEEEEEC
Confidence 3334689999888877 467888999 8 899998853
No 335
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=25.62 E-value=23 Score=32.33 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=28.5
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
||+.+.+|+++-.+..| +.+|..|++ +|++|+++--
T Consensus 2 mm~~~~dVvIVGaG~aG-----l~aA~~La~-~G~~V~vlE~ 37 (453)
T 3atr_A 2 MKELKYDVLIIGGGFAG-----SSAAYQLSR-RGLKILLVDS 37 (453)
T ss_dssp CEEEECSEEEECCSHHH-----HHHHHHHSS-SSCCEEEECS
T ss_pred CCCCcCCEEEECcCHHH-----HHHHHHHHH-CCCCEEEEEC
Confidence 34345679999888766 678899999 9999999953
No 336
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=25.54 E-value=78 Score=26.87 Aligned_cols=36 Identities=6% Similarity=-0.019 Sum_probs=30.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
.|+|..-|+.|-..-...||..|++ +|++|.++=..
T Consensus 43 vI~v~~KGGvGKTT~a~nLA~~La~-~G~~VlliD~D 78 (307)
T 3end_A 43 VFAVYGKGGIGKSTTSSNLSAAFSI-LGKRVLQIGCD 78 (307)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHH-TTCCEEEEEES
T ss_pred EEEEECCCCccHHHHHHHHHHHHHH-CCCeEEEEeCC
Confidence 4556656788999999999999999 99999999543
No 337
>3cmu_A Protein RECA, recombinase A; homologous recombination, recombination/DNA complex; HET: DNA ADP; 4.20A {Escherichia coli}
Probab=25.47 E-value=3.1e+02 Score=30.57 Aligned_cols=39 Identities=13% Similarity=0.187 Sum_probs=34.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
..|+++-.|+.|-..=.++++.+..+ +|.+|.|+..+..
T Consensus 1428 ~~vll~GppGtGKT~LA~ala~ea~~-~G~~v~Fi~~e~~ 1466 (2050)
T 3cmu_A 1428 RIVEIYGPESSGKTTLTLQVIAAAQR-EGKTCAFIDAEHA 1466 (2050)
T ss_dssp SEEEEECCTTSSHHHHHHHHHHHHHT-TTCCEEEECTTSC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHH-cCCcEEEEEcccc
Confidence 46888888999999999999999999 9999999997754
No 338
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=25.34 E-value=65 Score=26.92 Aligned_cols=44 Identities=23% Similarity=0.232 Sum_probs=28.5
Q ss_pred CcEEeccccCHH--HhhCccCcceeee-ccChhH--HHHHHHcCCcccC
Q 040467 344 QGLVVQKWAPQV--EILSHKSISAFLS-HCGWNS--VLEALSHRVPIIG 387 (387)
Q Consensus 344 ~~v~~~~~~pq~--~lL~~~~~~~~v~-HGG~~s--~~eal~~GvP~l~ 387 (387)
+.++|.+-+.-. ..|....+.+||| +||.+| ..-|-..|+|.|+
T Consensus 155 ~~ILVa~~l~Ps~~~~l~~~~~~givt~~Gg~tSH~AIlAR~lgIPavv 203 (258)
T 1zym_A 155 EVILVAADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIV 203 (258)
T ss_dssp CEEEECSCCCHHHHHHSCGGGEEEEECSCCCSSSHHHHHHHHHTCCEEC
T ss_pred CeEEEECCCCHHHHHhhchhhcEEEEEcCCCcccHHHHHHHHcCCCEEE
Confidence 345555555433 3444445888988 787775 3467788999875
No 339
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=25.29 E-value=1.4e+02 Score=20.64 Aligned_cols=32 Identities=16% Similarity=0.327 Sum_probs=21.7
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcchh
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~~ 148 (387)
+||+||.|.... .+..+.+++ ++|.+.++...
T Consensus 47 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (126)
T 1dbw_A 47 RNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHG 85 (126)
T ss_dssp CSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCC
Confidence 799999998765 445454443 57888776543
No 340
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=25.13 E-value=48 Score=30.55 Aligned_cols=32 Identities=6% Similarity=-0.007 Sum_probs=27.8
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+..|+++-.+..| +..|..|++ +|++|+++--
T Consensus 26 ~~DVvVIGgG~aG-----l~aA~~la~-~G~~V~liEk 57 (484)
T 3o0h_A 26 DFDLFVIGSGSGG-----VRAARLAGA-LGKRVAIAEE 57 (484)
T ss_dssp SEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEES
T ss_pred CCCEEEECcCHHH-----HHHHHHHHh-CcCEEEEEeC
Confidence 4689999888877 788999999 9999999964
No 341
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=25.06 E-value=73 Score=29.58 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=27.2
Q ss_pred HHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEE
Q 040467 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (387)
Q Consensus 101 ~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~ 144 (387)
.+++++++. +||++|... ....+|+++|||++.+
T Consensus 408 el~~~i~~~-------~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKRI-------KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH-------CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHhc-------CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 466677777 899999964 4578999999999864
No 342
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=25.01 E-value=38 Score=30.75 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=27.5
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|++.+.+|+++-.+..| +..|..|++ +|++|+++-
T Consensus 1 m~~~~~~v~iiG~G~~G-----l~aA~~l~~-~g~~v~v~E 35 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSG-----LAAATALRK-AGLSVAVIE 35 (453)
T ss_dssp -CEEEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEC
T ss_pred CCCCcCCEEEECCCHHH-----HHHHHHHHH-CCCcEEEEE
Confidence 55566789998887655 567899999 999999984
No 343
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=24.99 E-value=42 Score=28.97 Aligned_cols=34 Identities=9% Similarity=0.216 Sum_probs=26.7
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCc-EEEEEeCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRY-TITFVNTP 43 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh-~Vt~~~~~ 43 (387)
++++|.++-.+..|.. +|..|++ +|+ +|+++-..
T Consensus 3 ~~~kI~VIGaG~~G~~-----ia~~la~-~g~~~V~l~D~~ 37 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGN-----IAYIVGK-DNLADVVLFDIA 37 (317)
T ss_dssp CCCEEEEECCSHHHHH-----HHHHHHH-HTCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHH-----HHHHHHh-CCCceEEEEeCC
Confidence 3568999987776654 8888999 999 98888643
No 344
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=24.89 E-value=64 Score=27.25 Aligned_cols=32 Identities=9% Similarity=-0.061 Sum_probs=22.9
Q ss_pred cEEEEEcC-CCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 6 ENIVMFPL-MAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 6 ~~il~~~~-~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
++|+++-. +..| ..++++|.+ +||+|++++-.
T Consensus 5 ~~ilVtGatG~iG-----~~l~~~L~~-~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLIGATGYIG-----RHVAKASLD-LGHPTFLLVRE 37 (308)
T ss_dssp CCEEEESTTSTTH-----HHHHHHHHH-TTCCEEEECCC
T ss_pred CEEEEEcCCcHHH-----HHHHHHHHh-CCCCEEEEECC
Confidence 35766653 4444 468899999 99999988643
No 345
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=24.84 E-value=1.2e+02 Score=24.02 Aligned_cols=35 Identities=9% Similarity=0.101 Sum_probs=26.5
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
||+|+..+..- ..-+......|.+ .|++|++++..
T Consensus 11 ~v~ill~~g~~-~~e~~~~~~~l~~-ag~~v~~vs~~ 45 (208)
T 3ot1_A 11 RILVPVAHGSE-EMETVIIVDTLVR-AGFQVTMAAVG 45 (208)
T ss_dssp EEEEEECTTCC-HHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred eEEEEECCCCc-HHHHHHHHHHHHH-CCCEEEEEEcC
Confidence 67777766543 4556666788999 99999999875
No 346
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=24.78 E-value=35 Score=29.16 Aligned_cols=33 Identities=12% Similarity=0.052 Sum_probs=27.6
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
..+|+++-.+..| +..|..|++ +|++|+++-..
T Consensus 7 ~~~vvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~~ 39 (332)
T 3lzw_A 7 VYDITIIGGGPVG-----LFTAFYGGM-RQASVKIIESL 39 (332)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEECSS
T ss_pred cceEEEECCCHHH-----HHHHHHHHH-CCCCEEEEEcC
Confidence 3589999888766 788999999 99999999653
No 347
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=24.73 E-value=1.2e+02 Score=25.81 Aligned_cols=39 Identities=3% Similarity=-0.142 Sum_probs=29.9
Q ss_pred ccEEEEEcCCCccc----HHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 5 KENIVMFPLMAQGH----TIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~~~~GH----~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
++||+++..+..+- +..-..++++|.+ .||+|..+.+.+
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~-~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRD-AGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHH-TTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 46788888764432 3467889999999 999999997543
No 348
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=24.71 E-value=98 Score=25.69 Aligned_cols=32 Identities=13% Similarity=0.047 Sum_probs=24.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 5 k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~r 36 (264)
T 3tfo_A 5 KVILITGASGG---IGEGIARELGV-AGAKILLGAR 36 (264)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEeCCccH---HHHHHHHHHHH-CCCEEEEEEC
Confidence 46777776643 23688999999 9999988863
No 349
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.63 E-value=97 Score=25.51 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=24.8
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~-~G~~V~~~~r 61 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGS-LGARVVLTAR 61 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEEC
Confidence 357777766643 34688999999 9999988764
No 350
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=24.59 E-value=81 Score=25.09 Aligned_cols=32 Identities=16% Similarity=0.055 Sum_probs=27.6
Q ss_pred EEEEcC-CCcccHHHHHHHHHHHHhCCCcEEEEE
Q 040467 8 IVMFPL-MAQGHTIPFLALALHLENTNRYTITFV 40 (387)
Q Consensus 8 il~~~~-~~~GH~~P~l~la~~L~~~rGh~Vt~~ 40 (387)
|++... ++.|-..-.+.||..|++ +|++|.++
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~-~G~rVll~ 36 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKA-AGYRTAGY 36 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHH-TTCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH-CCCCEEEE
Confidence 455554 688999999999999999 99999986
No 351
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=24.55 E-value=49 Score=29.61 Aligned_cols=29 Identities=17% Similarity=0.143 Sum_probs=25.0
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+|+++-.+..| +..|..|++ +|++|+++=
T Consensus 2 dVvVIGaGiaG-----LsaA~~La~-~G~~V~vlE 30 (425)
T 3ka7_A 2 KTVVIGAGLGG-----LLSAARLSK-AGHEVEVFE 30 (425)
T ss_dssp EEEEECCBHHH-----HHHHHHHHH-TTCEEEEEC
T ss_pred cEEEECCCHHH-----HHHHHHHHh-CCCceEEEe
Confidence 58888887766 888999999 999999994
No 352
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=24.54 E-value=82 Score=27.19 Aligned_cols=39 Identities=8% Similarity=0.021 Sum_probs=27.0
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
|+|+++||.|+-.+..|.. +++.|.+..|.+|+-++...
T Consensus 1 M~m~~~~igiiG~G~~g~~-----~~~~l~~~~~~~l~av~d~~ 39 (330)
T 3e9m_A 1 MSLDKIRYGIMSTAQIVPR-----FVAGLRESAQAEVRGIASRR 39 (330)
T ss_dssp --CCCEEEEECSCCTTHHH-----HHHHHHHSSSEEEEEEBCSS
T ss_pred CCCCeEEEEEECchHHHHH-----HHHHHHhCCCcEEEEEEeCC
Confidence 6678899999999887753 56667762578888666443
No 353
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=24.42 E-value=58 Score=28.17 Aligned_cols=34 Identities=9% Similarity=-0.019 Sum_probs=24.1
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++|+++- +.|-+ -..|+++|.+ +||+|+.+.-
T Consensus 24 ~~~~vlVtG--atG~i--G~~l~~~L~~-~g~~V~~~~r 57 (351)
T 3ruf_A 24 SPKTWLITG--VAGFI--GSNLLEKLLK-LNQVVIGLDN 57 (351)
T ss_dssp SCCEEEEET--TTSHH--HHHHHHHHHH-TTCEEEEEEC
T ss_pred CCCeEEEEC--CCcHH--HHHHHHHHHH-CCCEEEEEeC
Confidence 345676654 33433 3578999999 9999999874
No 354
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=24.37 E-value=1.5e+02 Score=20.07 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=21.8
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcchh
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~~ 148 (387)
+||+||.|.... .+..+.+++ ++|.+.++...
T Consensus 47 ~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 85 (120)
T 1tmy_A 47 KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMG 85 (120)
T ss_dssp CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTT
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCC
Confidence 799999998765 345444443 58887776543
No 355
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=24.30 E-value=1.5e+02 Score=20.87 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=21.4
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~ 147 (387)
+||+||.|.... .+..+.+.+ ++|.+.++..
T Consensus 49 ~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (133)
T 3b2n_A 49 NPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTF 86 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecC
Confidence 799999998765 345554443 5888877653
No 356
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=24.13 E-value=51 Score=28.70 Aligned_cols=35 Identities=9% Similarity=0.150 Sum_probs=26.8
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
||++.+|+++-.+..| +..|..|++ +|++|+++-.
T Consensus 11 ~~~~~dvvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~ 45 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTG-----IFAAFQCGM-NNISCRIIES 45 (360)
T ss_dssp --CCEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEECS
T ss_pred cCCCCCEEEECCCHHH-----HHHHHHHHh-CCCCEEEEec
Confidence 3445689998888655 567889999 9999999964
No 357
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=24.12 E-value=93 Score=25.93 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=25.8
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 9 ~gk~vlVTGas~g---IG~~ia~~l~~-~G~~V~~~~~ 42 (287)
T 3pxx_A 9 QDKVVLVTGGARG---QGRSHAVKLAE-EGADIILFDI 42 (287)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCCEEEEeCCCCh---HHHHHHHHHHH-CCCeEEEEcc
Confidence 3467777777653 34689999999 9999998753
No 358
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=24.11 E-value=1.5e+02 Score=21.22 Aligned_cols=47 Identities=11% Similarity=0.038 Sum_probs=31.6
Q ss_pred cEEEEEcCCCcc-cHH-HHHHHHHHHHhCCC--cEEEEEeC-----CcchhhhhhcC
Q 040467 6 ENIVMFPLMAQG-HTI-PFLALALHLENTNR--YTITFVNT-----PSNLKKLKSSL 53 (387)
Q Consensus 6 ~~il~~~~~~~G-H~~-P~l~la~~L~~~rG--h~Vt~~~~-----~~~~~~~~~~~ 53 (387)
.-|+++.+|+.. ..+ .+-.+++.|++ +. ..|.+... |...+.+++.+
T Consensus 4 ~alllv~HGS~~~~~~~~~~~la~~l~~-~~~~~~V~~a~le~~~~Psl~~~l~~lg 59 (133)
T 2xws_A 4 RGLVIVGHGSQLNHYREVMELHRKRIEE-SGAFDEVKIAFAARKRRPMPDEAIREMN 59 (133)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHHHHHH-HTSSSEEEEEESSTTCSSCHHHHHHHCC
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHHHh-hCCCCcEEeeeeecCCCCCHHHHHHHcC
Confidence 359999999864 234 68899999998 53 67877743 33455555543
No 359
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=24.11 E-value=1.4e+02 Score=24.33 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=23.5
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcE-EEEEeCC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYT-ITFVNTP 43 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~-Vt~~~~~ 43 (387)
|.++..++ +++.++ | --=.++|++|++ +|++ |.++.-.
T Consensus 1 m~l~~k~v-lVtGas-~--gIG~~~a~~l~~-~G~~~v~~~~r~ 39 (254)
T 1sby_A 1 MDLTNKNV-IFVAAL-G--GIGLDTSRELVK-RNLKNFVILDRV 39 (254)
T ss_dssp CCCTTCEE-EEETTT-S--HHHHHHHHHHHH-TCCSEEEEEESS
T ss_pred CCCCCcEE-EEECCC-C--hHHHHHHHHHHH-CCCcEEEEEecC
Confidence 33433344 444433 3 235789999999 9997 7776543
No 360
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=24.08 E-value=50 Score=28.11 Aligned_cols=33 Identities=15% Similarity=0.339 Sum_probs=27.0
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.+.+|+++-.+..| +..|..|++ +|++|+++-.
T Consensus 15 ~~~dvvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~ 47 (319)
T 3cty_A 15 RDFDVVIVGAGAAG-----FSAAVYAAR-SGFSVAILDK 47 (319)
T ss_dssp CEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEES
T ss_pred CCCcEEEECcCHHH-----HHHHHHHHh-CCCcEEEEeC
Confidence 34679999888766 678899999 9999999954
No 361
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=24.06 E-value=62 Score=30.86 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=29.0
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
||+..+|+|+-.+..| +.+|..|++ +|++|+++-.
T Consensus 20 ~M~~~DVvIVGgG~AG-----l~aA~~Lar-~G~~V~LiEr 54 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAG-----SVAGLTLHK-LGHDVTIYER 54 (591)
T ss_dssp CCCCCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECS
T ss_pred cCCCCCEEEECcCHHH-----HHHHHHHHc-CCCCEEEEcC
Confidence 4556789999988755 778899999 9999999953
No 362
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=24.04 E-value=74 Score=29.17 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=26.4
Q ss_pred HHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEE
Q 040467 102 FRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (387)
Q Consensus 102 ~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~ 144 (387)
+++++++. +||++|.+.. ...+|+++|||++.+
T Consensus 377 l~~~i~~~-------~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 377 VHQWIKNE-------GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHS-------CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHhc-------CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 55566666 8999998864 577899999999986
No 363
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=24.03 E-value=57 Score=28.70 Aligned_cols=33 Identities=15% Similarity=0.185 Sum_probs=26.7
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|++.+|+|+-.+..| +.+|..|++ +|++|+++-
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~-~G~~v~viE 41 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQ-NGWDVRLHE 41 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEC
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHH-CCCCEEEEe
Confidence 345689999888766 788999999 999999994
No 364
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=23.99 E-value=1.1e+02 Score=24.97 Aligned_cols=32 Identities=16% Similarity=0.227 Sum_probs=23.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++.++.| -=.++|++|++ +|++|.+...
T Consensus 5 k~~lVTGas~g---IG~~ia~~l~~-~G~~V~~~~~ 36 (246)
T 3osu_A 5 KSALVTGASRG---IGRSIALQLAE-EGYNVAVNYA 36 (246)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEeC
Confidence 46677666542 34688999999 9999988754
No 365
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=23.96 E-value=78 Score=25.75 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=27.4
Q ss_pred EEEEcC-CCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 8 IVMFPL-MAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 8 il~~~~-~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|.+... ...|-..-...|++.|++ +|.+|.++-
T Consensus 7 i~Itgt~t~vGKT~vt~~L~~~l~~-~G~~V~~~K 40 (228)
T 3of5_A 7 FFIIGTDTEVGKTYISTKLIEVCEH-QNIKSLCLK 40 (228)
T ss_dssp EEEEESSSSSCHHHHHHHHHHHHHH-TTCCEEEEC
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHH-CCCeeEEec
Confidence 444444 467999999999999999 999999985
No 366
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=23.93 E-value=87 Score=25.30 Aligned_cols=32 Identities=9% Similarity=-0.099 Sum_probs=22.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++..+ |- -=.+++++|++ +|++|.++.-
T Consensus 8 k~vlITGas-gg--iG~~~a~~l~~-~G~~V~~~~r 39 (244)
T 3d3w_A 8 RRVLVTGAG-KG--IGRGTVQALHA-TGARVVAVSR 39 (244)
T ss_dssp CEEEEESTT-SH--HHHHHHHHHHH-TTCEEEEEES
T ss_pred cEEEEECCC-cH--HHHHHHHHHHH-CCCEEEEEeC
Confidence 455555444 22 24678899999 9999988764
No 367
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=23.90 E-value=2.3e+02 Score=22.69 Aligned_cols=64 Identities=13% Similarity=0.113 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhH
Q 040467 295 MMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNS 374 (387)
Q Consensus 295 ~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s 374 (387)
-.++++.+++.+..+++..+.. .-+|+.+....+ ..-+-+ ||++ .=-..|.+.
T Consensus 71 ~~~~~~~l~~~~~Dliv~a~y~------------~il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~p 123 (212)
T 3av3_A 71 ESEILRELKGRQIDWIALAGYM------------RLIGPTLLSAYE--GKIVNI-----------HPSL--LPAFPGKDA 123 (212)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC------------SCCCHHHHHHTT--TCEEEE-----------ESSC--TTSSCSTTH
T ss_pred HHHHHHHHHhcCCCEEEEchhh------------hhCCHHHHhhhc--CCEEEE-----------ecCc--CCCCCCcCH
Confidence 3458888888888999888765 237777776654 222333 4442 334568899
Q ss_pred HHHHHHcCCcc
Q 040467 375 VLEALSHRVPI 385 (387)
Q Consensus 375 ~~eal~~GvP~ 385 (387)
+..|+.+|...
T Consensus 124 i~~Ai~~G~~~ 134 (212)
T 3av3_A 124 IGQAYRAGVSE 134 (212)
T ss_dssp HHHHHHHTCSE
T ss_pred HHHHHHcCCCe
Confidence 99999999754
No 368
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=23.87 E-value=1.8e+02 Score=24.86 Aligned_cols=68 Identities=15% Similarity=0.171 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccC
Q 040467 292 ASQMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCG 371 (387)
Q Consensus 292 ~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG 371 (387)
.+.-.++++.+++.+..+++..+.. .-+|+.+....+ ..-+=+ ||++ .=-..|
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym------------~IL~~~~l~~~~--~~~INi-----------HpSl--LP~frG 219 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYM------------QILPPQLCREYA--HQVINI-----------HHSF--LPSFVG 219 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCC------------SCCCTTHHHHTT--TCEEEE-----------ESSC--TTSSCS
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhh------------hhcCHHHHhhhh--CCeEEe-----------Cccc--ccCCCC
Confidence 4445568888888889999988876 237777776654 222223 3332 223468
Q ss_pred hhHHHHHHHcCCccc
Q 040467 372 WNSVLEALSHRVPII 386 (387)
Q Consensus 372 ~~s~~eal~~GvP~l 386 (387)
.+.+..|+.+|+...
T Consensus 220 ~~p~~~Ai~~G~k~t 234 (302)
T 3o1l_A 220 AKPYHQASLRGVKLI 234 (302)
T ss_dssp SCHHHHHHHHTCSEE
T ss_pred ccHHHHHHHcCCCeE
Confidence 999999999998653
No 369
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=23.87 E-value=57 Score=29.03 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=26.6
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+++.+|+|+-.+..| +.+|..|++ +|++|+++=
T Consensus 21 ~~~~dV~IVGaG~aG-----l~~A~~La~-~G~~V~v~E 53 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGG-----LSAAVALKQ-SGIDCDVYE 53 (407)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEE
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHh-CCCCEEEEe
Confidence 345789999887655 788999999 999999994
No 370
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=23.86 E-value=3.3e+02 Score=22.99 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=63.2
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhC-CCcEEEEEe--CCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENT-NRYTITFVN--TPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTEN 79 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~-rGh~Vt~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 79 (387)
.+++||+++.++. || .+.+|..+-.+- -..+|..+. .+......++ .++.+..+|.. . .
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~-----~gIp~~~~~~~---~---~---- 149 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHW-----HKIPYYHFALD---P---K---- 149 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHH-----TTCCEEECCCB---T---T----
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHH-----cCCCEEEeCCC---c---C----
Confidence 3467999999887 43 455555554431 246777654 2344455555 67788877621 0 0
Q ss_pred CCCCCCCchhHHHHHHhhhhHHHHHHHHhhhhccCCCCCeEEEeCCCc-hhhHHHHHHhCCceEEEcc
Q 040467 80 SDSLPFHLFPNFFESTLSFKPHFRKLINGLIDEQNGHKPVCIIADMFF-AWSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~-~~~~~~a~~lgiP~v~~~~ 146 (387)
. + ....+.+.+.+++. ++|+||.=.+. .....+.+.+.-.++-+.+
T Consensus 150 -------~--r-----~~~~~~~~~~l~~~-------~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 196 (286)
T 3n0v_A 150 -------D--K-----PGQERKVLQVIEET-------GAELVILARYMQVLSPELCRRLDGWAINIHH 196 (286)
T ss_dssp -------B--H-----HHHHHHHHHHHHHH-------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred -------C--H-----HHHHHHHHHHHHhc-------CCCEEEecccccccCHHHHhhhcCCeEEecc
Confidence 0 0 11234566677777 89998876654 3666677777666676643
No 371
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=23.83 E-value=36 Score=30.59 Aligned_cols=35 Identities=17% Similarity=0.170 Sum_probs=28.4
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
||+..+|+++-.+..| +..|..|++ +|++|+++-.
T Consensus 1 MM~~~dViIIGgG~aG-----l~aA~~la~-~G~~V~vlEk 35 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAG-----LFCAAQLAK-LGKSVTVFDN 35 (401)
T ss_dssp CEEECSEEEECCSHHH-----HHHHHHHHH-TTCCEEEECS
T ss_pred CCCCCCEEEECCcHHH-----HHHHHHHHh-CCCCEEEEeC
Confidence 4456789999888766 677889999 9999999953
No 372
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=23.83 E-value=1.1e+02 Score=26.69 Aligned_cols=33 Identities=6% Similarity=0.169 Sum_probs=23.1
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCC-CcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTN-RYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~~ 42 (387)
.++|+++- +.|-+= ..|+++|.+ + ||+|+.+.-
T Consensus 24 ~~~vlVtG--atG~iG--~~l~~~L~~-~~g~~V~~~~r 57 (372)
T 3slg_A 24 AKKVLILG--VNGFIG--HHLSKRILE-TTDWEVFGMDM 57 (372)
T ss_dssp CCEEEEES--CSSHHH--HHHHHHHHH-HSSCEEEEEES
T ss_pred CCEEEEEC--CCChHH--HHHHHHHHh-CCCCEEEEEeC
Confidence 34676654 334332 578999999 8 999999974
No 373
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=23.79 E-value=83 Score=25.79 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=20.9
Q ss_pred CCeEEEeCCCch--hhHHHHHHhCCceEEEc
Q 040467 117 KPVCIIADMFFA--WSAEIAQEYGIFNALFV 145 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~lgiP~v~~~ 145 (387)
+||+||...... ....--++.|+|++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 899999877553 23344467899999874
No 374
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=23.73 E-value=62 Score=28.45 Aligned_cols=39 Identities=13% Similarity=0.048 Sum_probs=26.3
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
|+|+++||.++-.+..|+. .+..|.+..|.+|+-++...
T Consensus 1 M~m~~~~vgiiG~G~~g~~-----~~~~l~~~~~~~l~av~d~~ 39 (359)
T 3e18_A 1 MSLKKYQLVIVGYGGMGSY-----HVTLASAADNLEVHGVFDIL 39 (359)
T ss_dssp --CCCEEEEEECCSHHHHH-----HHHHHHTSTTEEEEEEECSS
T ss_pred CCCCcCcEEEECcCHHHHH-----HHHHHHhCCCcEEEEEEcCC
Confidence 7788999999999877752 34456662488888666443
No 375
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=23.73 E-value=96 Score=25.85 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=25.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~-~G~~V~~~~r 42 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAE-AGADIAICDR 42 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHH-CCCeEEEEeC
Confidence 467777777654 34688999999 9999988864
No 376
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=23.68 E-value=1.4e+02 Score=21.10 Aligned_cols=32 Identities=13% Similarity=0.197 Sum_probs=21.5
Q ss_pred CCeEEEeCCCch---hhHHHHHH----hCCceEEEcchh
Q 040467 117 KPVCIIADMFFA---WSAEIAQE----YGIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~---~~~~~a~~----lgiP~v~~~~~~ 148 (387)
+||+||.|.... .+..+.+. .++|++.++...
T Consensus 54 ~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 54 RPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp CCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 799999997653 34444443 378988876533
No 377
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=23.66 E-value=40 Score=26.08 Aligned_cols=33 Identities=6% Similarity=-0.002 Sum_probs=25.3
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCC-CcEEEEEeCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTN-RYTITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~~~ 43 (387)
+.||+++-.+..| ..+|+.|.+ . ||+|+++...
T Consensus 39 ~~~v~IiG~G~~G-----~~~a~~L~~-~~g~~V~vid~~ 72 (183)
T 3c85_A 39 HAQVLILGMGRIG-----TGAYDELRA-RYGKISLGIEIR 72 (183)
T ss_dssp TCSEEEECCSHHH-----HHHHHHHHH-HHCSCEEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHh-ccCCeEEEEECC
Confidence 4579988665544 567899999 9 9999998643
No 378
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=23.64 E-value=89 Score=26.32 Aligned_cols=32 Identities=13% Similarity=0.077 Sum_probs=25.1
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
.++++++..+.| -=.++|++|++ +|++|.++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHA-EGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHH-CCCeEEEEc
Confidence 357778776654 35689999999 999999886
No 379
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=23.60 E-value=45 Score=30.90 Aligned_cols=34 Identities=29% Similarity=0.502 Sum_probs=27.8
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|.|++|.|+-.+..|- .+|..|++ +||+|++...
T Consensus 13 ~~~~~IgvIGlG~MG~-----~lA~~La~-~G~~V~v~~r 46 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGR-----NLALNIES-RGYTVSIFNR 46 (480)
T ss_dssp --CBSEEEECCSHHHH-----HHHHHHHT-TTCCEEEECS
T ss_pred cCCCeEEEEccHHHHH-----HHHHHHHh-CCCeEEEEeC
Confidence 5678899999998884 68999999 9999998864
No 380
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=23.53 E-value=1.1e+02 Score=24.93 Aligned_cols=34 Identities=15% Similarity=0.062 Sum_probs=25.7
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.+..-
T Consensus 8 ~gk~~lVTGas~g---IG~a~a~~l~~-~G~~V~~~~r 41 (248)
T 3op4_A 8 EGKVALVTGASRG---IGKAIAELLAE-RGAKVIGTAT 41 (248)
T ss_dssp TTCEEEESSCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3467788777643 34688999999 9999988764
No 381
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=23.52 E-value=50 Score=28.79 Aligned_cols=33 Identities=9% Similarity=0.134 Sum_probs=26.0
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCc-EEEEEeCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRY-TITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh-~Vt~~~~~ 43 (387)
++||.++-.+..|.. +|..|+. .|| +|+++-..
T Consensus 9 ~~kI~VIGaG~vG~~-----lA~~la~-~g~~~V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGT-----MGYLCAL-RELADVVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHH-----HHHHHHH-HTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHH-----HHHHHHh-CCCCeEEEEECC
Confidence 468999987766654 8899999 999 98887543
No 382
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=23.38 E-value=97 Score=25.05 Aligned_cols=31 Identities=13% Similarity=0.137 Sum_probs=23.2
Q ss_pred EEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 8 IVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 8 il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 5 ~vlVTGas~G---IG~a~a~~l~~-~G~~V~~~~r 35 (235)
T 3l6e_A 5 HIIVTGAGSG---LGRALTIGLVE-RGHQVSMMGR 35 (235)
T ss_dssp EEEEESTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred EEEEECCCCH---HHHHHHHHHHH-CCCEEEEEEC
Confidence 6666666543 34688999999 9999988764
No 383
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=23.38 E-value=56 Score=29.94 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=26.1
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeCCc
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNTPS 44 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~~~ 44 (387)
+++|+++-.+..| +..|..|++ + |++||++-...
T Consensus 3 ~~~VvIIGaG~aG-----l~aA~~L~~-~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 3 LKHVVVIGAVALG-----PKAACRFKR-LDPEAHVTMIDQAS 38 (472)
T ss_dssp -CEEEEECCSSHH-----HHHHHHHHH-HCTTSEEEEECCC-
T ss_pred CCcEEEECCCHHH-----HHHHHHHHh-hCcCCCEEEEECCC
Confidence 4589999888766 567888888 7 99999996543
No 384
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=23.37 E-value=58 Score=27.89 Aligned_cols=39 Identities=18% Similarity=0.050 Sum_probs=28.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc-chhhhhh
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS-NLKKLKS 51 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~-~~~~~~~ 51 (387)
++|+|+-.|+.|- .+|..|+ .||+|+++.... ..+.+.+
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~--~g~~V~~~~r~~~~~~~l~~ 42 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS--LYHDVTVVTRRQEQAAAIQS 42 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH--TTSEEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHH-----HHHHHHh--cCCceEEEECCHHHHHHHHh
Confidence 4699999998885 4566676 689999998654 3455666
No 385
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=23.36 E-value=82 Score=26.01 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=29.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
.|.|..-|+.|-..-...||..|++ +|++|.++=
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~-~G~~VlliD 36 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHA-MGKTIMVVG 36 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHT-TTCCEEEEE
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHH-CCCcEEEEc
Confidence 3666666789999999999999999 999999984
No 386
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=23.35 E-value=57 Score=29.20 Aligned_cols=29 Identities=21% Similarity=0.169 Sum_probs=25.1
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+|+++-.+..| +..|..|++ +|++|+++=
T Consensus 2 dVvVIGaGiaG-----LsaA~~La~-~G~~V~vlE 30 (421)
T 3nrn_A 2 RAVVVGAGLGG-----LLAGAFLAR-NGHEIIVLE 30 (421)
T ss_dssp EEEEESCSHHH-----HHHHHHHHH-TTCEEEEEC
T ss_pred cEEEECCCHHH-----HHHHHHHHH-CCCeEEEEe
Confidence 58888888766 788999999 999999994
No 387
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=23.34 E-value=1.9e+02 Score=22.28 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=29.8
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
|+.++|+|+..+... ..-+......|.+ .|++|+++++..
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~-ag~~v~~vs~~~ 46 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEA-AGGTTELISLEP 46 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHH-TTCEEEEEESSS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 344678888776544 4456667788999 999999998653
No 388
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=23.33 E-value=1.1e+02 Score=22.47 Aligned_cols=30 Identities=20% Similarity=0.163 Sum_probs=20.7
Q ss_pred CCeEEEeCCCch--hhHHHHHH-------hCCceEEEcc
Q 040467 117 KPVCIIADMFFA--WSAEIAQE-------YGIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~-------lgiP~v~~~~ 146 (387)
+||+||.|.... .+..+++. -++|.+.++.
T Consensus 51 ~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (154)
T 3gt7_A 51 RPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTI 89 (154)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEEC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEEC
Confidence 799999998765 34444443 2578887764
No 389
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=23.26 E-value=71 Score=27.17 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=22.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+++- +.|.+ -..++++|.+ +||+|+.++-.
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~-~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLK-LGHPTYVFTRP 44 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHH-TTCCEEEEECT
T ss_pred eEEEEC--CCchH--HHHHHHHHHH-CCCcEEEEECC
Confidence 566664 33333 2578999999 99999988743
No 390
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=23.24 E-value=1.7e+02 Score=23.50 Aligned_cols=64 Identities=19% Similarity=0.194 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhH
Q 040467 295 MMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNS 374 (387)
Q Consensus 295 ~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s 374 (387)
-.++++.+++.+..+++..+.. .-+|+.+....+ ..-+-+ |+++ .=-..|...
T Consensus 75 d~~~~~~l~~~~~Dliv~agy~------------~il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~p 127 (209)
T 4ds3_A 75 EDAILAALDVLKPDIICLAGYM------------RLLSGRFIAPYE--GRILNI-----------HPSL--LPLFPGLHT 127 (209)
T ss_dssp HHHHHHHHHHHCCSEEEESSCC------------SCCCHHHHGGGT--TCEEEE-----------ESSC--TTSSCSSCH
T ss_pred HHHHHHHHHhcCCCEEEEeccc------------cCcCHHHHhhcc--CCeEEE-----------CCcc--ccCCCChhH
Confidence 3458888888888999988876 237777766543 222223 4442 334568889
Q ss_pred HHHHHHcCCcc
Q 040467 375 VLEALSHRVPI 385 (387)
Q Consensus 375 ~~eal~~GvP~ 385 (387)
+..|+.+|+..
T Consensus 128 i~~Ai~~G~~~ 138 (209)
T 4ds3_A 128 HQRALDAGMKL 138 (209)
T ss_dssp HHHHHHTTCSE
T ss_pred HHHHHHcCCCe
Confidence 99999999764
No 391
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=23.24 E-value=1.5e+02 Score=25.18 Aligned_cols=65 Identities=15% Similarity=0.225 Sum_probs=44.5
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhH
Q 040467 295 MMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNS 374 (387)
Q Consensus 295 ~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s 374 (387)
-.++++.+++.+..+++..+.. .-+++.+....+ ..-+=+ ||++ .=-..|.+.
T Consensus 154 ~~~~~~~l~~~~~Dlivlagym------------~il~~~~l~~~~--~~~iNi-----------HpSl--LP~~rG~~p 206 (287)
T 3nrb_A 154 ESQIKNIVTQSQADLIVLARYM------------QILSDDLSAFLS--GRCINI-----------HHSF--LPGFKGAKP 206 (287)
T ss_dssp HHHHHHHHHHHTCSEEEESSCC------------SCCCHHHHHHHT--TSEEEE-----------ESSC--TTTTCSSCH
T ss_pred HHHHHHHHHHhCCCEEEhhhhh------------hhcCHHHHhhcc--CCeEEE-----------Cccc--ccCCCCchH
Confidence 3458888888888999888876 337888877665 332223 3332 223468999
Q ss_pred HHHHHHcCCccc
Q 040467 375 VLEALSHRVPII 386 (387)
Q Consensus 375 ~~eal~~GvP~l 386 (387)
+..|+.+|+...
T Consensus 207 ~~~Ai~~G~k~t 218 (287)
T 3nrb_A 207 YHQAHTRGVKLI 218 (287)
T ss_dssp HHHHHHHTCSEE
T ss_pred HHHHHHcCCCeE
Confidence 999999998653
No 392
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=23.23 E-value=2.6e+02 Score=22.26 Aligned_cols=63 Identities=22% Similarity=0.286 Sum_probs=42.0
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHH
Q 040467 296 MQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSV 375 (387)
Q Consensus 296 ~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~ 375 (387)
.++++.+++.+..+++..+.. .-+|+.+....+ ..-+-+ |+++ .=-..|.+.+
T Consensus 69 ~~~~~~l~~~~~Dliv~a~y~------------~il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~pi 121 (209)
T 1meo_A 69 SAIDLVLEEFSIDIVCLAGFM------------RILSGPFVQKWN--GKMLNI-----------HPSL--LPSFKGSNAH 121 (209)
T ss_dssp HHHHHHHHHTTCCEEEEESCC------------SCCCHHHHHHTT--TSEEEE-----------ESSS--TTSSCSSCHH
T ss_pred HHHHHHHHhcCCCEEEEcchh------------hhCCHHHHhhhc--CCEEEE-----------ccCc--CcCCCCccHH
Confidence 457888888888999988876 237777766544 222223 3332 2334688899
Q ss_pred HHHHHcCCcc
Q 040467 376 LEALSHRVPI 385 (387)
Q Consensus 376 ~eal~~GvP~ 385 (387)
..|+.+|...
T Consensus 122 ~~Ai~~G~~~ 131 (209)
T 1meo_A 122 EQALETGVTV 131 (209)
T ss_dssp HHHHHHTCSE
T ss_pred HHHHHcCCCc
Confidence 9999998764
No 393
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=23.20 E-value=49 Score=30.55 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=27.7
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|.+++|.|+-.+..| ..+|..|++ +||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~-~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVES-RGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHH-TTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHh-CCCEEEEEcC
Confidence 345789999988887 457899999 9999998864
No 394
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=23.16 E-value=45 Score=26.76 Aligned_cols=34 Identities=18% Similarity=0.036 Sum_probs=25.3
Q ss_pred EEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 8 IVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 8 il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.+++-++..++..-+..++..|.+ +|++|..+-.
T Consensus 6 ~vv~lHG~~~~~~~~~~~~~~l~~-~g~~vi~~D~ 39 (258)
T 3dqz_A 6 HFVLVHNAYHGAWIWYKLKPLLES-AGHRVTAVEL 39 (258)
T ss_dssp EEEEECCTTCCGGGGTTHHHHHHH-TTCEEEEECC
T ss_pred cEEEECCCCCccccHHHHHHHHHh-CCCEEEEecC
Confidence 445555555666668899999999 9999877743
No 395
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.08 E-value=1.1e+02 Score=25.13 Aligned_cols=34 Identities=9% Similarity=0.012 Sum_probs=25.6
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 9 ~~k~vlVTGas~g---IG~aia~~l~~-~G~~V~~~~r 42 (262)
T 3pk0_A 9 QGRSVVVTGGTKG---IGRGIATVFAR-AGANVAVAGR 42 (262)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3467788777643 24678999999 9999998863
No 396
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=23.07 E-value=96 Score=26.74 Aligned_cols=28 Identities=11% Similarity=0.264 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEEEcCCC
Q 040467 290 IAASQMMQLAMALEACGKNFIWVVKPPL 317 (387)
Q Consensus 290 ~~~~~~~~~~~a~~~~~~~~l~~~~~~~ 317 (387)
.+.+..+.+.+++.+...+.||...++.
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGy 91 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGY 91 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSS
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCc
Confidence 4456677799999999999999998775
No 397
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=23.06 E-value=41 Score=31.29 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=27.2
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCC-cEEEEEe
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNR-YTITFVN 41 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rG-h~Vt~~~ 41 (387)
|++.+|+|+-.|..| |..|..|++ +| ++|+++=
T Consensus 6 ~~~~~VvIIGaG~aG-----L~AA~~L~~-~G~~~V~VlE 39 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAG-----LKAASTLHQ-NGIQDCLVLE 39 (516)
T ss_dssp CEEEEEEEECCBHHH-----HHHHHHHHH-TTCCSEEEEC
T ss_pred CCCCcEEEECCCHHH-----HHHHHHHHh-cCCCCEEEEe
Confidence 445689999888654 788999999 99 9999984
No 398
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=23.06 E-value=91 Score=25.56 Aligned_cols=34 Identities=9% Similarity=-0.051 Sum_probs=25.5
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 6 ~~k~vlVTGas~G---IG~aia~~l~~-~G~~V~~~~r 39 (252)
T 3h7a_A 6 RNATVAVIGAGDY---IGAEIAKKFAA-EGFTVFAGRR 39 (252)
T ss_dssp CSCEEEEECCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEECCCch---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3457777766643 34689999999 9999998864
No 399
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=23.03 E-value=83 Score=26.93 Aligned_cols=38 Identities=18% Similarity=0.109 Sum_probs=22.5
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|+++||.++-.+..|.. .+++.|.+..|++|+.++.
T Consensus 1 m~m~~~~vgiiG~G~~g~~----~~~~~l~~~~~~~lvav~d 38 (319)
T 1tlt_A 1 MSLKKLRIGVVGLGGIAQK----AWLPVLAAASDWTLQGAWS 38 (319)
T ss_dssp ----CEEEEEECCSTHHHH----THHHHHHSCSSEEEEEEEC
T ss_pred CCCCcceEEEECCCHHHHH----HHHHHHHhCCCeEEEEEEC
Confidence 7788899999998876642 1344555425888875553
No 400
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=23.02 E-value=69 Score=25.34 Aligned_cols=30 Identities=20% Similarity=0.176 Sum_probs=23.2
Q ss_pred EEEEEc-CCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFP-LMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~-~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+|+++- .+..| ..+++.|.+ +||+|+++..
T Consensus 2 ~i~iiGa~G~~G-----~~ia~~l~~-~g~~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLG-----KGLALRLAT-LGHEIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHH-----HHHHHHHHT-TTCEEEEEES
T ss_pred eEEEEcCCCHHH-----HHHHHHHHH-CCCEEEEEeC
Confidence 588886 55555 367899999 9999998864
No 401
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=22.92 E-value=76 Score=26.90 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=26.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++|.|+-.+..|. .+|+.|++ +||+|+++..
T Consensus 4 ~~I~iiG~G~mG~-----~~a~~l~~-~G~~V~~~d~ 34 (302)
T 2h78_A 4 KQIAFIGLGHMGA-----PMATNLLK-AGYLLNVFDL 34 (302)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHH-TTCEEEEECS
T ss_pred CEEEEEeecHHHH-----HHHHHHHh-CCCeEEEEcC
Confidence 3699999888885 67999999 9999999854
No 402
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=22.89 E-value=1.6e+02 Score=20.86 Aligned_cols=32 Identities=3% Similarity=0.034 Sum_probs=21.6
Q ss_pred CCeEEEeCCCch--hhHHHHHH-------hCCceEEEcchh
Q 040467 117 KPVCIIADMFFA--WSAEIAQE-------YGIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~-------lgiP~v~~~~~~ 148 (387)
+||+||.|.... .+..+.+. -++|.+.++...
T Consensus 50 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 90 (140)
T 3grc_A 50 PYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSANA 90 (140)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTTH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecCC
Confidence 799999998765 34444443 257888776543
No 403
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=22.83 E-value=2.4e+02 Score=22.56 Aligned_cols=64 Identities=13% Similarity=0.203 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhH
Q 040467 295 MMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNS 374 (387)
Q Consensus 295 ~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s 374 (387)
-.++++.+++.+..+++..+.. .-+|+.+....+ ..-+-+ |+++ .=-..|...
T Consensus 70 d~~~~~~l~~~~~Dliv~agy~------------~Il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~p 122 (211)
T 3p9x_A 70 EIEVVQQLKEKQIDFVVLAGYM------------RLVGPTLLGAYE--GRIVNI-----------HPSL--LPAFPGLHA 122 (211)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC------------SCCCHHHHHHHT--TSEEEE-----------ESSC--TTSSCSSCH
T ss_pred HHHHHHHHHhcCCCEEEEeCch------------hhcCHHHHhhcc--CCeEEE-----------CCcc--CCCCCCccH
Confidence 4458888989899999988876 337777776654 222223 3332 233458889
Q ss_pred HHHHHHcCCcc
Q 040467 375 VLEALSHRVPI 385 (387)
Q Consensus 375 ~~eal~~GvP~ 385 (387)
+..|+.+|...
T Consensus 123 i~~Ai~~G~~~ 133 (211)
T 3p9x_A 123 IEQAIRANVKV 133 (211)
T ss_dssp HHHHHHTTCSE
T ss_pred HHHHHHcCCCe
Confidence 99999998754
No 404
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=22.81 E-value=1.5e+02 Score=23.46 Aligned_cols=36 Identities=8% Similarity=-0.026 Sum_probs=26.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
+|+|+..+.. ...-+......|.+ .|++|+++++..
T Consensus 4 kV~ill~~g~-~~~e~~~~~~~l~~-ag~~v~~vs~~~ 39 (205)
T 2ab0_A 4 SALVCLAPGS-EETEAVTTIDLLVR-GGIKVTTASVAS 39 (205)
T ss_dssp EEEEEECTTC-CHHHHHHHHHHHHH-TTCEEEEEECSS
T ss_pred EEEEEEcCCC-cHHHHHHHHHHHHH-CCCEEEEEeCCC
Confidence 4777766654 34556667788999 999999998654
No 405
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=22.79 E-value=1.4e+02 Score=24.60 Aligned_cols=36 Identities=8% Similarity=0.066 Sum_probs=25.8
Q ss_pred EEEEEcC-----CCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 7 NIVMFPL-----MAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 7 ~il~~~~-----~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
||+|+.. +.. -..=+......|++ .|++|+++++..
T Consensus 25 kV~ill~~~~~~dG~-e~~E~~~p~~vL~~-aG~~V~~~S~~~ 65 (242)
T 3l3b_A 25 NSAVILAGCGHMDGS-EIREAVLVMLELDR-HNVNFKCFAPNK 65 (242)
T ss_dssp EEEEECCCSSTTTSC-CHHHHHHHHHHHHH-TTCEEEEEECSS
T ss_pred EEEEEEecCCCCCCe-eHHHHHHHHHHHHH-CCCEEEEEecCC
Confidence 6777765 432 33345666688999 999999998753
No 406
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=22.74 E-value=67 Score=27.17 Aligned_cols=36 Identities=8% Similarity=0.107 Sum_probs=26.8
Q ss_pred EEEEEcCCCccc---HHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGH---TIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH---~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+++..+.... ......++++|.+ +||+|.++.+.
T Consensus 3 ~i~il~~~~~~~~~~~~s~~~l~~a~~~-~G~~v~~~d~~ 41 (316)
T 1gsa_A 3 KLGIVMDPIANINIKKDSSFAMLLEAQR-RGYELHYMEMG 41 (316)
T ss_dssp EEEEECSCGGGCCTTTCHHHHHHHHHHH-TTCEEEEECGG
T ss_pred eEEEEeCcHHhCCcCCChHHHHHHHHHH-CCCEEEEEchh
Confidence 699998874321 2334679999999 99999998754
No 407
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=22.69 E-value=66 Score=27.17 Aligned_cols=31 Identities=13% Similarity=0.246 Sum_probs=25.4
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++|.|+-.+..|. .+|..|.+ .||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLK-AGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHH-TTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHh-CCCEEEEEeC
Confidence 4799999888875 46888999 9999988753
No 408
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=22.66 E-value=49 Score=28.53 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=27.4
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
++.+|+++-.+..| +..|..|++ +|++|+++-..
T Consensus 2 ~~~~vvIIG~G~aG-----l~~A~~l~~-~g~~v~vie~~ 35 (357)
T 4a9w_A 2 DSVDVVVIGGGQSG-----LSAGYFLRR-SGLSYVILDAE 35 (357)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHH-SSCCEEEECCS
T ss_pred CcCCEEEECcCHHH-----HHHHHHHHH-CCCCEEEEECC
Confidence 34678888888765 678999999 99999999643
No 409
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=22.66 E-value=3.3e+02 Score=22.62 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=25.6
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCc---EEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRY---TITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh---~Vt~~~~ 42 (387)
+++|.|+-.+..|. .+++.|.+ .|| +|++...
T Consensus 3 ~~~I~iIG~G~mG~-----aia~~l~~-~g~~~~~V~v~dr 37 (280)
T 3tri_A 3 TSNITFIGGGNMAR-----NIVVGLIA-NGYDPNRICVTNR 37 (280)
T ss_dssp CSCEEEESCSHHHH-----HHHHHHHH-TTCCGGGEEEECS
T ss_pred CCEEEEEcccHHHH-----HHHHHHHH-CCCCCCeEEEEeC
Confidence 45799998877764 57889999 999 8998864
No 410
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=22.64 E-value=1.6e+02 Score=23.89 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=25.5
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++.++.| -=.++|++|++ +|++|.+...
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~-~G~~v~~~~~ 39 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLAN-DGALVAIHYG 39 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHH-CCCeEEEEeC
Confidence 457777777754 35689999999 9999988643
No 411
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=22.57 E-value=1.3e+02 Score=21.86 Aligned_cols=33 Identities=15% Similarity=0.141 Sum_probs=22.3
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcchhH
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGGGS 149 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~~~ 149 (387)
+||+||.|.... .+..+.+.+ .+|++.++....
T Consensus 51 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~ 90 (154)
T 2rjn_A 51 SVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYAD 90 (154)
T ss_dssp CCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGG
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 799999998765 344444432 688888765443
No 412
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=22.49 E-value=51 Score=27.46 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=25.0
Q ss_pred EEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 9 VMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 9 l~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+++-+|..|+-.-+..+++.|++ +|++|..+-
T Consensus 54 VlllHG~~~s~~~~~~la~~La~-~Gy~Via~D 85 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFAR-AGYTVATPR 85 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHH-TTCEEEECC
T ss_pred EEEECCCCCCHHHHHHHHHHHHH-CCCEEEEEC
Confidence 44457777777778889999999 999887653
No 413
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=22.49 E-value=51 Score=28.44 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=25.2
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+|.|+-.+..|. .+|..|++ +||+|+++..
T Consensus 2 ~I~iiG~G~mG~-----~~a~~L~~-~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGS-----ALSVPLVD-NGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHH-----HHHHHHHH-HCCEEEEECC
T ss_pred EEEEECcCHHHH-----HHHHHHHh-CCCeEEEEEc
Confidence 688988887774 56899999 9999999975
No 414
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=22.46 E-value=71 Score=29.17 Aligned_cols=36 Identities=11% Similarity=0.130 Sum_probs=28.7
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
|+.+.+|+++-.+..| +..|..|++ +|++|+++-..
T Consensus 1 M~~~~dvvIIGgG~aG-----l~aA~~l~~-~g~~V~lie~~ 36 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAA-----MAAALKAVE-QGAQVTLIERG 36 (467)
T ss_dssp CCCCCEEEEECCSHHH-----HHHHHHHHH-TTCEEEEEESS
T ss_pred CCCcCCEEEECCCHHH-----HHHHHHHHH-CCCEEEEEeCC
Confidence 4456789999888665 567899999 99999999754
No 415
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=22.41 E-value=1.2e+02 Score=27.20 Aligned_cols=34 Identities=3% Similarity=-0.142 Sum_probs=27.4
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||++.+|+++..+ .--..+++++++ .|++|.++.
T Consensus 21 mm~~~~I~ilGgG-----~lg~~l~~aa~~-lG~~v~~~d 54 (403)
T 3k5i_A 21 MWNSRKVGVLGGG-----QLGRMLVESANR-LNIQVNVLD 54 (403)
T ss_dssp CCSCCEEEEECCS-----HHHHHHHHHHHH-HTCEEEEEE
T ss_pred CCCCCEEEEECCC-----HHHHHHHHHHHH-CCCEEEEEE
Confidence 5566789998876 345778899999 999999987
No 416
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A
Probab=22.37 E-value=39 Score=26.79 Aligned_cols=21 Identities=14% Similarity=0.229 Sum_probs=18.3
Q ss_pred eeeeccChhHHHHHHHcCCcc
Q 040467 365 AFLSHCGWNSVLEALSHRVPI 385 (387)
Q Consensus 365 ~~v~HGG~~s~~eal~~GvP~ 385 (387)
++|+|||...+.-+...|.|.
T Consensus 139 lvVsHg~~ir~ll~~llg~~~ 159 (202)
T 3mxo_A 139 IFICHANVIRYIVCRALQFPP 159 (202)
T ss_dssp EEEECHHHHHHHHHHHTTCCG
T ss_pred EEEeCHHHHHHHHHHHhCCCH
Confidence 599999999998888888874
No 417
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=22.33 E-value=53 Score=29.93 Aligned_cols=35 Identities=6% Similarity=0.009 Sum_probs=27.8
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+++.+|+++-.+..| +..|..|++ +|++|+++-..
T Consensus 2 ~~~~dvvIIGgG~aG-----l~aA~~l~~-~g~~V~liE~~ 36 (450)
T 1ges_A 2 TKHYDYIAIGGGSGG-----IASINRAAM-YGQKCALIEAK 36 (450)
T ss_dssp -CEEEEEEECCSHHH-----HHHHHHHHT-TTCCEEEEESS
T ss_pred CccCCEEEECCCHHH-----HHHHHHHHh-CCCeEEEEcCC
Confidence 445789999887665 678899999 99999999643
No 418
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=22.31 E-value=96 Score=24.91 Aligned_cols=32 Identities=16% Similarity=0.213 Sum_probs=23.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++++++.++.| -=.++|++|++ +|++|.+..-
T Consensus 3 k~vlITGas~g---IG~~ia~~l~~-~G~~V~~~~r 34 (235)
T 3l77_A 3 KVAVITGASRG---IGEAIARALAR-DGYALALGAR 34 (235)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 46677666543 34688999999 9999988764
No 419
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=22.29 E-value=70 Score=26.93 Aligned_cols=30 Identities=13% Similarity=0.200 Sum_probs=25.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
++|.|+-.+..|. .+|+.|.+ .||+|+++.
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~-~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGS-----PMAINLAR-AGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHH-----HHHHHHHH-TTCEEEECC
T ss_pred CEEEEEccCHHHH-----HHHHHHHh-CCCEEEEEc
Confidence 4699998888885 47889999 999998775
No 420
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=22.25 E-value=47 Score=32.34 Aligned_cols=40 Identities=13% Similarity=-0.011 Sum_probs=28.2
Q ss_pred EEeccccCH---------HHhhCccCcceeeecc----ChhHHHHHHHcCCcccC
Q 040467 346 LVVQKWAPQ---------VEILSHKSISAFLSHC----GWNSVLEALSHRVPIIG 387 (387)
Q Consensus 346 v~~~~~~pq---------~~lL~~~~~~~~v~HG----G~~s~~eal~~GvP~l~ 387 (387)
+.+..|++. .+++..+++ ||.-. -..+..||+++|+|+|+
T Consensus 495 If~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~ 547 (725)
T 3nb0_A 495 IFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSIT 547 (725)
T ss_dssp EECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEE
T ss_pred EEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEE
Confidence 445577765 457777665 66432 34589999999999984
No 421
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=22.20 E-value=58 Score=29.32 Aligned_cols=33 Identities=21% Similarity=0.424 Sum_probs=27.1
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCc-EEEEEeC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRY-TITFVNT 42 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh-~Vt~~~~ 42 (387)
+...|+|+-.+..| +..|..|++ +|+ +|+++--
T Consensus 5 ~~~dVvIIGgG~aG-----lsaA~~La~-~G~~~V~vlE~ 38 (438)
T 3dje_A 5 KSSSLLIVGAGTWG-----TSTALHLAR-RGYTNVTVLDP 38 (438)
T ss_dssp TTSCEEEECCSHHH-----HHHHHHHHH-TTCCCEEEEES
T ss_pred CCCCEEEECCCHHH-----HHHHHHHHH-cCCCcEEEEeC
Confidence 34689999888765 678999999 999 9999953
No 422
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=22.17 E-value=71 Score=29.55 Aligned_cols=34 Identities=12% Similarity=-0.075 Sum_probs=26.4
Q ss_pred HHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEE
Q 040467 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (387)
Q Consensus 101 ~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~ 144 (387)
.+++++++. +||++|... ....+|+++|||++.+
T Consensus 392 el~~~i~~~-------~pDL~ig~~---~~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 392 VLLKTVDEY-------QADILIAGG---RNMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHT-------TCSEEECCG---GGHHHHHHTTCCBCCC
T ss_pred HHHHHHHhc-------CCCEEEECC---chhHHHHHcCCCEEEe
Confidence 455667676 899999865 3667899999998754
No 423
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=22.16 E-value=1.6e+02 Score=20.26 Aligned_cols=31 Identities=19% Similarity=0.208 Sum_probs=21.2
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~ 147 (387)
+||+||.|.... .+..+++.+ ++|.+.++..
T Consensus 47 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (124)
T 1srr_A 47 RPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAY 84 (124)
T ss_dssp CCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESS
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEcc
Confidence 799999998765 344444433 5888877653
No 424
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=22.09 E-value=38 Score=30.78 Aligned_cols=35 Identities=29% Similarity=0.399 Sum_probs=26.8
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCC------cEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNR------YTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rG------h~Vt~~~ 41 (387)
|++++.+|+|+-.+..| +..|..|++ +| ++|+++=
T Consensus 1 M~~~~~dVvIIGaGiaG-----LsaA~~L~~-~G~~~~~~~~V~vlE 41 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITG-----LAAAFYMEK-EIKEKNLPLELTLVE 41 (470)
T ss_dssp ----CEEEEEECCSHHH-----HHHHHHHHH-HHTTTTCSEEEEEEC
T ss_pred CCCCCCcEEEECCCHHH-----HHHHHHHHH-hccccCCCCCEEEEE
Confidence 33334689999888766 888999999 99 9999984
No 425
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=22.03 E-value=69 Score=26.14 Aligned_cols=22 Identities=23% Similarity=0.252 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCCcEEEEEeCCc
Q 040467 22 FLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 22 ~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
-.++|++|++ +|++|+++..+.
T Consensus 37 G~aiA~~~~~-~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 37 GFAIAAAAAR-RGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHH-TTCEEEEEECSC
T ss_pred HHHHHHHHHH-CCCEEEEEECCc
Confidence 3678999999 999999986543
No 426
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=22.03 E-value=1.6e+02 Score=20.45 Aligned_cols=30 Identities=17% Similarity=0.153 Sum_probs=20.1
Q ss_pred CCeEEEeCCCch--hhHHHHHH-------hCCceEEEcc
Q 040467 117 KPVCIIADMFFA--WSAEIAQE-------YGIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~-------lgiP~v~~~~ 146 (387)
+||+||.|.... .+..+.+. -++|.+.++.
T Consensus 47 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 47 PPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 799999998765 34444332 1678887754
No 427
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=22.02 E-value=1.2e+02 Score=25.06 Aligned_cols=33 Identities=12% Similarity=-0.008 Sum_probs=25.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++.++.| -=.++|++|++ +|++|.+...
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~-~G~~V~~~~r 59 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHA-QGAIVGLHGT 59 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 467777776653 34688999999 9999988864
No 428
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=22.00 E-value=69 Score=26.53 Aligned_cols=33 Identities=15% Similarity=0.047 Sum_probs=24.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
++++++.++.| -=.++|++|++ +|++|.++.-.
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~-~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLE-HGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHH-TTCCEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHH-CCCEEEEEeCC
Confidence 56777766643 34688999999 99999988643
No 429
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=21.96 E-value=1.4e+02 Score=20.32 Aligned_cols=31 Identities=13% Similarity=0.081 Sum_probs=21.3
Q ss_pred CCeEEEeCCCch--hhHHHHHHh----CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY----GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l----giP~v~~~~~ 147 (387)
+||+||.|.... .+..+.+.+ .+|.+.++..
T Consensus 46 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 46 SVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 799999998765 455555543 5787776543
No 430
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=21.93 E-value=1.4e+02 Score=21.75 Aligned_cols=32 Identities=9% Similarity=0.072 Sum_probs=21.8
Q ss_pred CCeEEEeCCCch--hhHHHHHH-----hCCceEEEcchh
Q 040467 117 KPVCIIADMFFA--WSAEIAQE-----YGIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~-----lgiP~v~~~~~~ 148 (387)
+||+||.|.... .+..+.+. -++|.+.++...
T Consensus 58 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~ 96 (153)
T 3hv2_A 58 EVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDP 96 (153)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCC
T ss_pred CCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCC
Confidence 799999998765 34444443 258888776543
No 431
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=21.83 E-value=74 Score=26.18 Aligned_cols=30 Identities=7% Similarity=0.036 Sum_probs=20.5
Q ss_pred CCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 117 KPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
+||+||...... .....-++.|||++.+..
T Consensus 60 ~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~ 90 (260)
T 2q8p_A 60 KPTHVLSVSTIKDEMQPFYKQLNMKGYFYDF 90 (260)
T ss_dssp CCSEEEEEGGGHHHHHHHHHHHTSCCEEECC
T ss_pred CCCEEEecCccCHHHHHHHHHcCCcEEEecC
Confidence 899999765332 233445678999988754
No 432
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=21.82 E-value=1.6e+02 Score=20.17 Aligned_cols=30 Identities=20% Similarity=0.179 Sum_probs=19.9
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-------CCceEEEcc
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-------GIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-------giP~v~~~~ 146 (387)
+||+||.|.... .+..+.+.+ .+|.+.++.
T Consensus 45 ~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 83 (124)
T 1mb3_A 45 KPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTA 83 (124)
T ss_dssp CCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC-
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEEC
Confidence 799999998765 345444432 578777754
No 433
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=21.78 E-value=1.3e+02 Score=24.15 Aligned_cols=34 Identities=12% Similarity=0.066 Sum_probs=26.8
Q ss_pred EEEEEcCCCccc--HHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGH--TIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH--~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
..+++-++..|+ ..-+..++..|.+ +|++|..+-
T Consensus 28 p~vvl~HG~~~~~~~~~~~~~~~~l~~-~g~~vi~~D 63 (251)
T 2wtm_A 28 PLCIIIHGFTGHSEERHIVAVQETLNE-IGVATLRAD 63 (251)
T ss_dssp EEEEEECCTTCCTTSHHHHHHHHHHHH-TTCEEEEEC
T ss_pred CEEEEEcCCCcccccccHHHHHHHHHH-CCCEEEEec
Confidence 456666777777 7778889999999 999987663
No 434
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=21.77 E-value=1e+02 Score=25.80 Aligned_cols=32 Identities=19% Similarity=0.103 Sum_probs=24.7
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++++++.++.| -=.++|++|++ +|++|.+..-
T Consensus 26 k~~lVTGas~G---IG~~ia~~la~-~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTSG---IGLAIARTLAK-AGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHH-TTCEEEEECC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 57777776654 34689999999 9999988764
No 435
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=21.76 E-value=51 Score=27.98 Aligned_cols=33 Identities=21% Similarity=0.116 Sum_probs=23.2
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+++|+++-. .|.+ -..|+++|.+ +||+|+.+.-
T Consensus 7 ~~~vlVtGa--tG~i--G~~l~~~L~~-~g~~V~~~~r 39 (321)
T 3vps_A 7 KHRILITGG--AGFI--GGHLARALVA-SGEEVTVLDD 39 (321)
T ss_dssp CCEEEEETT--TSHH--HHHHHHHHHH-TTCCEEEECC
T ss_pred CCeEEEECC--CChH--HHHHHHHHHH-CCCEEEEEec
Confidence 346666543 3433 3478999999 9999999864
No 436
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=21.71 E-value=87 Score=26.32 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=25.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++|.|+-.+..| ..+|+.|++ +||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~-~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVK-AGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH-TTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHH-CCCeEEEEcC
Confidence 468888887776 467999999 9999998864
No 437
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=21.65 E-value=44 Score=16.24 Aligned_cols=16 Identities=31% Similarity=0.638 Sum_probs=13.0
Q ss_pred ChhHHHHHHHcCCccc
Q 040467 371 GWNSVLEALSHRVPII 386 (387)
Q Consensus 371 G~~s~~eal~~GvP~l 386 (387)
|.|++..-|+.|.|.+
T Consensus 1 giGa~LKVLa~~LP~l 16 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPAL 16 (26)
T ss_pred CchHHHHHHHccchHH
Confidence 6788888888888865
No 438
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=21.62 E-value=1.2e+02 Score=27.50 Aligned_cols=40 Identities=18% Similarity=0.179 Sum_probs=34.4
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCC-CcEEEEEeCCcchh
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTN-RYTITFVNTPSNLK 47 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~r-Gh~Vt~~~~~~~~~ 47 (387)
.|+++..++.|-..-...||..|++ + |++|.++....++.
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l~~-~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFLRE-KHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHH-TSCCCEEEEECCCSST
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH-hcCCeEEEEecCCCCc
Confidence 5666777789999999999999999 9 99999998776554
No 439
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=21.57 E-value=1.1e+02 Score=25.52 Aligned_cols=33 Identities=12% Similarity=-0.009 Sum_probs=25.7
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~-~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHA-DGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEeC
Confidence 467788777655 34689999999 9999988763
No 440
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=21.56 E-value=1e+02 Score=25.56 Aligned_cols=33 Identities=12% Similarity=-0.081 Sum_probs=24.0
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 5 ~k~vlVTGas~g---IG~~~a~~l~~-~G~~V~~~~r 37 (281)
T 3m1a_A 5 AKVWLVTGASSG---FGRAIAEAAVA-AGDTVIGTAR 37 (281)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CcEEEEECCCCh---HHHHHHHHHHH-CCCEEEEEeC
Confidence 356777766532 24578999999 9999988764
No 441
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=21.54 E-value=1.3e+02 Score=21.44 Aligned_cols=30 Identities=17% Similarity=0.116 Sum_probs=20.0
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~ 147 (387)
+||+||.|. .. .+..+.+.+ ++|++.++..
T Consensus 48 ~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 48 KIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp CCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 799999998 54 334444332 5888887654
No 442
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=21.49 E-value=38 Score=28.29 Aligned_cols=25 Identities=24% Similarity=0.387 Sum_probs=20.6
Q ss_pred cceeeeccChhHHHHHHHc---CCcccC
Q 040467 363 ISAFLSHCGWNSVLEALSH---RVPIIG 387 (387)
Q Consensus 363 ~~~~v~HGG~~s~~eal~~---GvP~l~ 387 (387)
.+++|+=||=||+.+++.. ++|+++
T Consensus 42 ~D~vv~~GGDGTll~~a~~~~~~~PilG 69 (258)
T 1yt5_A 42 ADLIVVVGGDGTVLKAAKKAADGTPMVG 69 (258)
T ss_dssp CSEEEEEECHHHHHHHHTTBCTTCEEEE
T ss_pred CCEEEEEeCcHHHHHHHHHhCCCCCEEE
Confidence 4569999999999999876 677653
No 443
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=21.47 E-value=94 Score=25.96 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=24.7
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 23 ~~k~~lVTGas~G---IG~aia~~la~-~G~~V~~~~r 56 (279)
T 3sju_A 23 RPQTAFVTGVSSG---IGLAVARTLAA-RGIAVYGCAR 56 (279)
T ss_dssp --CEEEEESTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 3457777777653 34678999999 9999988764
No 444
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=21.31 E-value=87 Score=26.87 Aligned_cols=30 Identities=10% Similarity=-0.001 Sum_probs=20.7
Q ss_pred CCeEEEeCCCch-hhHHHHHHhCCceEEEcc
Q 040467 117 KPVCIIADMFFA-WSAEIAQEYGIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~-~~~~~a~~lgiP~v~~~~ 146 (387)
+||+||...... ....--++.|||++.+..
T Consensus 84 ~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~ 114 (326)
T 3psh_A 84 KPDVVFVTNYAPSEMIKQISDVNIPVVAISL 114 (326)
T ss_dssp CCSEEEEETTCCHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEEeCCCChHHHHHHHHcCCCEEEEec
Confidence 899999875432 233444667999998754
No 445
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=21.29 E-value=56 Score=29.68 Aligned_cols=35 Identities=11% Similarity=0.217 Sum_probs=27.4
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCC--CcEEEEEeCCc
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTN--RYTITFVNTPS 44 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~r--Gh~Vt~~~~~~ 44 (387)
++.+|+++-.+..| +..|..|++ + |++|+++-...
T Consensus 2 ~~~~VvIIGgG~aG-----l~aA~~L~~-~~~~~~V~vie~~~ 38 (449)
T 3kd9_A 2 SLKKVVIIGGGAAG-----MSAASRVKR-LKPEWDVKVFEATE 38 (449)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHH-HCTTSEEEEECSSS
T ss_pred CcCcEEEECCcHHH-----HHHHHHHHH-hCcCCCEEEEECCC
Confidence 34689999888776 677888888 6 89999996443
No 446
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=21.26 E-value=1.7e+02 Score=24.84 Aligned_cols=66 Identities=15% Similarity=0.278 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChh
Q 040467 294 QMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWN 373 (387)
Q Consensus 294 ~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~ 373 (387)
.-.++++.+++.+..+++..+.. .-+++.+....+ ..-+-+ |+++ .=-..|.+
T Consensus 154 ~~~~~~~~l~~~~~Dlivlagy~------------~il~~~~l~~~~--~~~iNi-----------HpSl--LP~~rG~~ 206 (288)
T 3obi_A 154 QEAAITALIAQTHTDLVVLARYM------------QILSDEMSARLA--GRCINI-----------HHSF--LPGFKGAK 206 (288)
T ss_dssp HHHHHHHHHHHHTCCEEEESSCC------------SCCCHHHHHHTT--TSEEEE-----------EEEC--SSCCCSSC
T ss_pred HHHHHHHHHHhcCCCEEEhhhhh------------hhCCHHHHhhhc--CCeEEe-----------Cccc--ccCCCCch
Confidence 34458888888888999888876 237788777654 222223 3332 33346899
Q ss_pred HHHHHHHcCCccc
Q 040467 374 SVLEALSHRVPII 386 (387)
Q Consensus 374 s~~eal~~GvP~l 386 (387)
.+..|+.+|+...
T Consensus 207 p~~~A~~~G~~~~ 219 (288)
T 3obi_A 207 PYHQAFDRGVKLI 219 (288)
T ss_dssp HHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEE
Confidence 9999999998653
No 447
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=21.26 E-value=52 Score=28.16 Aligned_cols=32 Identities=19% Similarity=0.176 Sum_probs=26.6
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++|.|+-.+..|. .+|+.|++ +||+|+++..
T Consensus 9 ~~~IgiIG~G~mG~-----~~A~~l~~-~G~~V~~~dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGT-----IMAQVLLK-QGKRVAIWNR 40 (306)
T ss_dssp SCSEEEECCSHHHH-----HHHHHHHH-TTCCEEEECS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHH-CCCEEEEEeC
Confidence 45799998887775 68999999 9999998853
No 448
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=21.25 E-value=67 Score=29.57 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=25.8
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
++.+|+++-.+..| +..|..|++ +|++|+++=
T Consensus 12 ~~~~v~iiG~G~~G-----l~aA~~l~~-~g~~v~v~E 43 (504)
T 1sez_A 12 SAKRVAVIGAGVSG-----LAAAYKLKI-HGLNVTVFE 43 (504)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHT-TSCEEEEEC
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHH-CCCcEEEEE
Confidence 34689998887654 778999999 999999984
No 449
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=21.24 E-value=1.1e+02 Score=26.68 Aligned_cols=38 Identities=21% Similarity=0.204 Sum_probs=31.8
Q ss_pred EEEEEcC-CCcccHHHHHHHHHHHHhCCCcEEEEEeCCcc
Q 040467 7 NIVMFPL-MAQGHTIPFLALALHLENTNRYTITFVNTPSN 45 (387)
Q Consensus 7 ~il~~~~-~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~ 45 (387)
+|+|++. |+.|-..-..++|..|++ +|++|.++.....
T Consensus 27 ~i~v~sgKGGvGKTTvA~~LA~~lA~-~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 27 KYIMFGGKGGVGKTTMSAATGVYLAE-KGLKVVIVSTDPA 65 (349)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHH-SSCCEEEEECCTT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 4555544 788999999999999999 9999999987663
No 450
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=21.23 E-value=2.1e+02 Score=19.92 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=27.6
Q ss_pred eEEEecCCCcCCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 040467 279 VIYVSFGSQNTIAASQMMQLAMALEACGKNFIWVVKPP 316 (387)
Q Consensus 279 ~v~vs~GS~~~~~~~~~~~~~~a~~~~~~~~l~~~~~~ 316 (387)
.|++-|.| +++.+.++.+-+++.|.++++.+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 56776654 68999999999999999999888654
No 451
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=21.23 E-value=48 Score=24.04 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=23.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.+|+++-.+..| ..+++.|.+ .|++|+++..
T Consensus 7 ~~v~I~G~G~iG-----~~~a~~l~~-~g~~v~~~d~ 37 (144)
T 2hmt_A 7 KQFAVIGLGRFG-----GSIVKELHR-MGHEVLAVDI 37 (144)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHH-TTCCCEEEES
T ss_pred CcEEEECCCHHH-----HHHHHHHHH-CCCEEEEEeC
Confidence 368888755444 567899999 9999998864
No 452
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=21.16 E-value=2.5e+02 Score=22.60 Aligned_cols=64 Identities=17% Similarity=0.170 Sum_probs=43.0
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhH
Q 040467 295 MMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNS 374 (387)
Q Consensus 295 ~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s 374 (387)
-.++++.+++.+..+++..+.. .-+++.+....+ ..-+-+ |+++ .=-..|...
T Consensus 72 d~~~~~~l~~~~~Dliv~agy~------------~il~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~p 124 (215)
T 3tqr_A 72 ESTLQKTIDHYDPKLIVLAGFM------------RKLGKAFVSHYS--GRMINI-----------HPSL--LPKYTGLNT 124 (215)
T ss_dssp HHHHHHHHHTTCCSEEEESSCC------------SCCCHHHHHHTT--TSEEEE-----------ESSS--TTTTCSSCH
T ss_pred HHHHHHHHHhcCCCEEEEccch------------hhCCHHHHhhcc--CCeEEe-----------Cccc--CCCCCChhH
Confidence 3458888888899999988876 237777776654 222223 3332 223468889
Q ss_pred HHHHHHcCCcc
Q 040467 375 VLEALSHRVPI 385 (387)
Q Consensus 375 ~~eal~~GvP~ 385 (387)
+..|+.+|+..
T Consensus 125 i~~Ai~~G~~~ 135 (215)
T 3tqr_A 125 HERALAAGETE 135 (215)
T ss_dssp HHHHHHTTCSE
T ss_pred HHHHHHcCCCe
Confidence 99999998764
No 453
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=21.15 E-value=3.5e+02 Score=22.29 Aligned_cols=29 Identities=24% Similarity=0.186 Sum_probs=18.8
Q ss_pred CCeEEEeCCCchh----hHHHHHHhCCceEEEc
Q 040467 117 KPVCIIADMFFAW----SAEIAQEYGIFNALFV 145 (387)
Q Consensus 117 ~pD~vV~D~~~~~----~~~~a~~lgiP~v~~~ 145 (387)
++|.||.-..... ....+...|+|+|.+.
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 61 NPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 6888887654432 2344556789988874
No 454
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.07 E-value=69 Score=21.61 Aligned_cols=27 Identities=7% Similarity=0.214 Sum_probs=22.6
Q ss_pred ccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 17 GHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 17 GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
-+.|-+-.+.++.++ ||.+|.-++.|+
T Consensus 85 qdqnrleefsrevrr-rgfevrtvtspd 111 (134)
T 2l69_A 85 QDQNRLEEFSREVRR-RGFEVRTVTSPD 111 (134)
T ss_dssp SCHHHHHHHHHHHHH-TTCCEEEESSHH
T ss_pred CchhHHHHHHHHHHh-cCceEEEecChH
Confidence 467788889999999 999999888765
No 455
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=21.03 E-value=1.1e+02 Score=24.78 Aligned_cols=36 Identities=17% Similarity=0.054 Sum_probs=23.6
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
|+++.. .++++.++ |-+ =.++|++|.+ +|++|.++.
T Consensus 1 M~l~~~-~vlItGas-ggi--G~~~a~~l~~-~G~~V~~~~ 36 (247)
T 2hq1_A 1 MQLKGK-TAIVTGSS-RGL--GKAIAWKLGN-MGANIVLNG 36 (247)
T ss_dssp CTTTTC-EEEESSCS-SHH--HHHHHHHHHH-TTCEEEEEE
T ss_pred CCCCCc-EEEEECCC-chH--HHHHHHHHHH-CCCEEEEEc
Confidence 434333 45555443 332 3688999999 999999884
No 456
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=21.02 E-value=43 Score=27.70 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=25.9
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCC----cEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNR----YTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rG----h~Vt~~~~ 42 (387)
+++|.|+-.+..|.. +|+.|.+ +| |+|+++..
T Consensus 4 ~m~i~iiG~G~mG~~-----~a~~l~~-~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSA-----LAHGIAN-ANIIKKENLFYYGP 39 (262)
T ss_dssp SSCEEEECCSHHHHH-----HHHHHHH-HTSSCGGGEEEECS
T ss_pred CCEEEEECcCHHHHH-----HHHHHHH-CCCCCCCeEEEEeC
Confidence 567999988887754 7888999 99 89998853
No 457
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=21.01 E-value=3.9e+02 Score=22.72 Aligned_cols=39 Identities=21% Similarity=0.129 Sum_probs=23.0
Q ss_pred HHHHHHHHh-hhhccCCCCCeEEEeCCCchhh---HHHHHHhCCceEEEc
Q 040467 100 PHFRKLING-LIDEQNGHKPVCIIADMFFAWS---AEIAQEYGIFNALFV 145 (387)
Q Consensus 100 ~~~~~ll~~-~~~~~~~~~pD~vV~D~~~~~~---~~~a~~lgiP~v~~~ 145 (387)
..++.++++ . ++|.||.-...... ...+...|||+|.+.
T Consensus 51 ~~i~~~i~~~~-------~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~ 93 (350)
T 3h75_A 51 QQARELFQGRD-------KPDYLMLVNEQYVAPQILRLSQGSGIKLFIVN 93 (350)
T ss_dssp HHHHHHHHSSS-------CCSEEEEECCSSHHHHHHHHHTTSCCEEEEEE
T ss_pred HHHHHHHhcCC-------CCCEEEEeCchhhHHHHHHHHHhCCCcEEEEc
Confidence 345556654 4 78988875422222 233445689999874
No 458
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=21.01 E-value=1.2e+02 Score=24.91 Aligned_cols=34 Identities=12% Similarity=0.024 Sum_probs=27.7
Q ss_pred EEEEcC-CCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 8 IVMFPL-MAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 8 il~~~~-~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|.+... ...|-..-.+.|++.|++ +|.+|.++-+
T Consensus 24 i~ItgT~t~vGKT~vs~gL~~~L~~-~G~~V~~fKP 58 (242)
T 3qxc_A 24 LFISATNTNAGKTTCARLLAQYCNA-CGVKTILLKP 58 (242)
T ss_dssp EEEEESSTTSSHHHHHHHHHHHHHH-TTCCEEEECC
T ss_pred EEEEeCCCCCcHHHHHHHHHHHHHh-CCCceEEEee
Confidence 444444 466999999999999999 9999999953
No 459
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=20.97 E-value=1.7e+02 Score=24.84 Aligned_cols=65 Identities=17% Similarity=0.233 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhH
Q 040467 295 MMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNS 374 (387)
Q Consensus 295 ~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s 374 (387)
-.++++.+++.+..+++..+.. .-+|+.+....+ ..-+-+ |+++ .=-..|.+.
T Consensus 160 ~~~~~~~l~~~~~Dlivla~y~------------~il~~~~l~~~~--~~~iNi-----------HpSl--LP~~rG~~p 212 (292)
T 3lou_A 160 EAQWLDVFETSGAELVILARYM------------QVLSPEASARLA--NRAINI-----------HHSF--LPGFKGAKP 212 (292)
T ss_dssp HHHHHHHHHHHTCSEEEESSCC------------SCCCHHHHHHTT--TSEEEE-----------EEEC--SSCCCSSCH
T ss_pred HHHHHHHHHHhCCCEEEecCch------------hhCCHHHHhhhc--CCeEEe-----------CCCc--CcCCCCccH
Confidence 4458888888888999888876 237788777654 222223 4332 333568999
Q ss_pred HHHHHHcCCccc
Q 040467 375 VLEALSHRVPII 386 (387)
Q Consensus 375 ~~eal~~GvP~l 386 (387)
+..|+.+|+...
T Consensus 213 ~~~Ai~~G~~~~ 224 (292)
T 3lou_A 213 YHQAHARGVKLI 224 (292)
T ss_dssp HHHHHHHTCSEE
T ss_pred HHHHHHcCCCeE
Confidence 999999998653
No 460
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=20.96 E-value=1.4e+02 Score=24.53 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=23.7
Q ss_pred cEEEEEcCCC--cccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMA--QGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~--~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++..+ .| -=.++|++|++ +|++|.+..-
T Consensus 7 ~k~vlVTGasg~~G---IG~~ia~~l~~-~G~~V~~~~r 41 (266)
T 3oig_A 7 GRNIVVMGVANKRS---IAWGIARSLHE-AGARLIFTYA 41 (266)
T ss_dssp TCEEEEECCCSTTS---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEEcCCCCCc---HHHHHHHHHHH-CCCEEEEecC
Confidence 4566666655 22 23588999999 9999988754
No 461
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=20.90 E-value=1.3e+02 Score=23.41 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=30.0
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEE
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFV 40 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~ 40 (387)
||+.+.|+|.-.++.|-..-.-.|++.|.. .| +|...
T Consensus 1 mm~~~~I~i~G~~GsGKsT~~~~L~~~l~~-~g-~~~~~ 37 (213)
T 2plr_A 1 MKKGVLIAFEGIDGSGKSSQATLLKDWIEL-KR-DVYLT 37 (213)
T ss_dssp -CCCEEEEEECCTTSSHHHHHHHHHHHHTT-TS-CEEEE
T ss_pred CCCCeEEEEEcCCCCCHHHHHHHHHHHHhh-cC-CEEEe
Confidence 355567999999999999999999999998 88 66443
No 462
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=20.88 E-value=88 Score=26.27 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=23.4
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCC-cEEEEEeCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNR-YTITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rG-h~Vt~~~~~ 43 (387)
+++|+++ |+.|.+ -..++++|.+ +| |+|+.++-.
T Consensus 5 ~~~ilVt--GatG~i--G~~l~~~L~~-~g~~~V~~~~R~ 39 (299)
T 2wm3_A 5 KKLVVVF--GGTGAQ--GGSVARTLLE-DGTFKVRVVTRN 39 (299)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHH-HCSSEEEEEESC
T ss_pred CCEEEEE--CCCchH--HHHHHHHHHh-cCCceEEEEEcC
Confidence 3456555 344544 3568899999 99 999998743
No 463
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=20.87 E-value=94 Score=28.18 Aligned_cols=30 Identities=23% Similarity=0.141 Sum_probs=25.0
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+|.++-.|..| ..+|..|++ +||+|+++..
T Consensus 2 kI~VIG~G~vG-----~~~A~~la~-~G~~V~~~d~ 31 (436)
T 1mv8_A 2 RISIFGLGYVG-----AVCAGCLSA-RGHEVIGVDV 31 (436)
T ss_dssp EEEEECCSTTH-----HHHHHHHHH-TTCEEEEECS
T ss_pred EEEEECCCHHH-----HHHHHHHHH-CCCEEEEEEC
Confidence 68898877777 468899999 9999998853
No 464
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=20.85 E-value=73 Score=29.98 Aligned_cols=101 Identities=7% Similarity=0.085 Sum_probs=55.7
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCcchhhhhhcCCCCCCeeEEeccCCCCCCCCCCCCCCCCCCC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPSNLKKLKSSLPQNSSIHLREIPFDGIAHDLPPCTENSDSLP 84 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (387)
+.++++...- =.-++.+|+.|.+ .|+++ +++......+++ .|+....+. ...++|+.....-.
T Consensus 5 ~G~aLISV~D----K~~iv~lAk~L~~-lGf~I--~ATgGTAk~L~e-----~GI~v~~V~---k~TgfPE~l~GRVK-- 67 (593)
T 1g8m_A 5 QQLALLSVSE----KAGLVEFARSLNA-LGLGL--IASGGTATALRD-----AGLPVRDVS---DLTGFPEMLGGRVK-- 67 (593)
T ss_dssp CCEEEEEESC----CTTHHHHHHHHHH-TTCEE--EECHHHHHHHHH-----TTCCCEEHH---HHHSCCCBGGGTBS--
T ss_pred CCEEEEEEeC----cHhHHHHHHHHHH-CCCEE--EEchHHHHHHHH-----CCCeEEEee---cccCCchhhcCCcc--
Confidence 4455555444 3347899999999 99876 477888889999 666666553 12244443322111
Q ss_pred CCchhHHHHHH--hhhhHHHHHHHHhhhhccCCCCCeEEEeCCCch
Q 040467 85 FHLFPNFFEST--LSFKPHFRKLINGLIDEQNGHKPVCIIADMFFA 128 (387)
Q Consensus 85 ~~~~~~~~~~~--~~~~~~~~~ll~~~~~~~~~~~pD~vV~D~~~~ 128 (387)
+....+...+ +....++.++- +..-. ..|+||++.+-+
T Consensus 68 -TLHP~ihgGiLar~~~~h~~~l~-~~~I~----~iDlVvvNLYPF 107 (593)
T 1g8m_A 68 -TLHPAVHAGILARNIPEDNADMN-KQDFS----LVRVVVCNLYPF 107 (593)
T ss_dssp -SCSHHHHHHHHCCSSHHHHHHHH-HTTCC----CEEEEEEECCCH
T ss_pred -ccCchhhhhhccCCCHHHHHHHH-HcCCC----ceeEEEEeccCH
Confidence 1112222222 33344444433 33111 469999986543
No 465
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=20.83 E-value=70 Score=26.45 Aligned_cols=29 Identities=10% Similarity=0.067 Sum_probs=23.9
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
+|.|+-.+..|. .+|+.|++ .||+|++..
T Consensus 2 ~I~iIG~G~mG~-----~la~~l~~-~g~~V~~~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQ-----TLASRLRS-RGVEVVTSL 30 (264)
T ss_dssp EEEEESCSHHHH-----HHHHHHHH-TTCEEEECC
T ss_pred eEEEEechHHHH-----HHHHHHHH-CCCeEEEeC
Confidence 688888777775 57999999 999999853
No 466
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=20.80 E-value=57 Score=28.30 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=24.0
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCCc
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
|.+++|+++-. .|.+ =..|+++|.+ +||+|++++-..
T Consensus 8 M~~~~IlVtGa--tG~i--G~~l~~~L~~-~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGA--TGFI--GQFVATASLD-AHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECT--TSHH--HHHHHHHHHH-TTCCEEEEECSS
T ss_pred CCCCeEEEECC--CcHH--HHHHHHHHHH-CCCCEEEEECCC
Confidence 33456776644 3432 2568899999 999999997543
No 467
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=20.79 E-value=1.9e+02 Score=23.31 Aligned_cols=63 Identities=21% Similarity=0.242 Sum_probs=41.8
Q ss_pred HHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChhHH
Q 040467 296 MQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWNSV 375 (387)
Q Consensus 296 ~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~s~ 375 (387)
.++++.+++.+..+++..+.. .-+|+.+....+ ..-+-+ |+++ .=-..|.+.+
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~------------~IL~~~~l~~~~--~~~iNi-----------HpSL--LP~yrG~~pi 124 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFM------------SILPEKFVTDWH--HKIINI-----------HPSL--LPSFKGLNAQ 124 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCC------------SCCCHHHHHHTT--TSEEEE-----------ESSC--TTTTCSSCHH
T ss_pred HHHHHHHHHhCCCEEEEeCCc------------eEeCHHHHhhcc--CCeEEE-----------Cccc--ccCCCCccHH
Confidence 557777788888888888776 237777776654 222223 3332 3334688899
Q ss_pred HHHHHcCCcc
Q 040467 376 LEALSHRVPI 385 (387)
Q Consensus 376 ~eal~~GvP~ 385 (387)
..|+.+|+..
T Consensus 125 ~~Ai~~G~~~ 134 (215)
T 3kcq_A 125 EQAYKAGVKI 134 (215)
T ss_dssp HHHHHHTCSE
T ss_pred HHHHHcCCCe
Confidence 9999998754
No 468
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=20.79 E-value=49 Score=30.63 Aligned_cols=36 Identities=8% Similarity=0.109 Sum_probs=26.9
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|+..+|.|+-.+..|. .+|..|++ +||+|++.-.
T Consensus 1 Msm~~~kVgVIGaG~MG~-----~IA~~la~-aG~~V~l~D~ 36 (483)
T 3mog_A 1 MSLNVQTVAVIGSGTMGA-----GIAEVAAS-HGHQVLLYDI 36 (483)
T ss_dssp ---CCCCEEEECCSHHHH-----HHHHHHHH-TTCCEEEECS
T ss_pred CCCCCCEEEEECcCHHHH-----HHHHHHHH-CCCeEEEEEC
Confidence 445556799998877774 57899999 9999999853
No 469
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=20.77 E-value=50 Score=28.97 Aligned_cols=32 Identities=6% Similarity=-0.025 Sum_probs=25.6
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEE
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFV 40 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~ 40 (387)
|++.-|+++-.+-.| +.+|..|++ +|++|+++
T Consensus 2 Me~yDViIVGaGpaG-----l~~A~~La~-~G~~V~v~ 33 (397)
T 3oz2_A 2 METYDVLVVGGGPGG-----STAARYAAK-YGLKTLMI 33 (397)
T ss_dssp EEEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEE
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHH-CCCcEEEE
Confidence 344568888777655 678999999 99999999
No 470
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=20.73 E-value=1.4e+02 Score=24.64 Aligned_cols=33 Identities=3% Similarity=0.047 Sum_probs=23.4
Q ss_pred EEEEEcCCC-cccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMA-QGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~-~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++++++..+ .|-+ =.++|++|++ +|++|.+..-
T Consensus 8 k~vlVTGa~~s~gI--G~aia~~l~~-~G~~V~~~~r 41 (269)
T 2h7i_A 8 KRILVSGIITDSSI--AFHIARVAQE-QGAQLVLTGF 41 (269)
T ss_dssp CEEEECCCSSTTSH--HHHHHHHHHH-TTCEEEEEEC
T ss_pred CEEEEECCCCCCch--HHHHHHHHHH-CCCEEEEEec
Confidence 566666651 3333 4689999999 9999988764
No 471
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=20.71 E-value=60 Score=28.72 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=26.4
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
...|+|+-.+..| +..|.+|++ +|++|+++=-
T Consensus 4 ~~DVvIIGaG~~G-----l~~A~~La~-~G~~V~vlE~ 35 (397)
T 2oln_A 4 SYDVVVVGGGPVG-----LATAWQVAE-RGHRVLVLER 35 (397)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEES
T ss_pred cCCEEEECCCHHH-----HHHHHHHHH-CCCeEEEEeC
Confidence 4678888888665 778999999 9999999953
No 472
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=20.70 E-value=82 Score=26.73 Aligned_cols=31 Identities=13% Similarity=0.100 Sum_probs=21.6
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
++|+++- +.|.+ -..|+++|.+ +||+|+++.
T Consensus 4 ~~ilVtG--atG~i--G~~l~~~L~~-~g~~v~~~~ 34 (321)
T 1e6u_A 4 QRVFIAG--HRGMV--GSAIRRQLEQ-RGDVELVLR 34 (321)
T ss_dssp EEEEEET--TTSHH--HHHHHHHHTT-CTTEEEECC
T ss_pred CEEEEEC--CCcHH--HHHHHHHHHh-CCCeEEEEe
Confidence 4666653 34444 3468899999 999988764
No 473
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=20.67 E-value=88 Score=26.29 Aligned_cols=30 Identities=20% Similarity=0.233 Sum_probs=25.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+|.|+-.+..|. .+|+.|++ +||+|+++..
T Consensus 3 ~I~iiG~G~mG~-----~~a~~l~~-~G~~V~~~dr 32 (287)
T 3pdu_A 3 TYGFLGLGIMGG-----PMAANLVR-AGFDVTVWNR 32 (287)
T ss_dssp CEEEECCSTTHH-----HHHHHHHH-HTCCEEEECS
T ss_pred eEEEEccCHHHH-----HHHHHHHH-CCCeEEEEcC
Confidence 599998888884 57999999 9999999864
No 474
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=20.65 E-value=2e+02 Score=19.34 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=21.6
Q ss_pred CCeEEEeCCCch--hhHHHHHH----hCCceEEEcchh
Q 040467 117 KPVCIIADMFFA--WSAEIAQE----YGIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~----lgiP~v~~~~~~ 148 (387)
+||+||.|.... .+..+++. -.+|.+.++...
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 45 QPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 799999998765 34444443 368888776543
No 475
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=20.65 E-value=1.2e+02 Score=25.60 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=25.9
Q ss_pred CCCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 2 AQRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 2 ~~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
||++++|+++... .-...+.+.|.+ .||+|.+..
T Consensus 2 ~~~~m~i~v~~~~-----~~~~~~~~~L~~-~g~~v~~~~ 35 (293)
T 3d4o_A 2 MLTGKHVVIIGGD-----ARQLEIIRKLST-FDAKISLVG 35 (293)
T ss_dssp CCTTCEEEEECBC-----HHHHHHHHHHHH-TTCEEEEES
T ss_pred CccCcEEEEECCC-----HHHHHHHHHHHh-CCCEEEEec
Confidence 5677889888443 345667899999 999998864
No 476
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=20.60 E-value=1e+02 Score=25.16 Aligned_cols=29 Identities=7% Similarity=-0.076 Sum_probs=20.1
Q ss_pred CCeEEEeCCCc--hhhHHHHHHhCCceEEEc
Q 040467 117 KPVCIIADMFF--AWSAEIAQEYGIFNALFV 145 (387)
Q Consensus 117 ~pD~vV~D~~~--~~~~~~a~~lgiP~v~~~ 145 (387)
+||+||..... .....--++.|||++.+.
T Consensus 59 ~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 59 RPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 89999986542 233344567899998874
No 477
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=20.52 E-value=1.5e+02 Score=21.45 Aligned_cols=31 Identities=10% Similarity=-0.133 Sum_probs=21.3
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~ 147 (387)
+||+||.|.... .+..+++.+ ++|++.++..
T Consensus 66 ~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 103 (150)
T 4e7p_A 66 SVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTF 103 (150)
T ss_dssp CCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCC
Confidence 799999998765 445554432 5888777653
No 478
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=20.50 E-value=1.3e+02 Score=25.29 Aligned_cols=34 Identities=9% Similarity=0.011 Sum_probs=25.9
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
+.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 40 ~~k~vlVTGas~G---IG~aia~~la~-~G~~V~~~~r 73 (293)
T 3rih_A 40 SARSVLVTGGTKG---IGRGIATVFAR-AGANVAVAAR 73 (293)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHH-CCCEEEEEEC
Confidence 3467788777653 34678999999 9999998863
No 479
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=20.48 E-value=63 Score=27.59 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=27.5
Q ss_pred CccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 4 RKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 4 ~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
.+.+|+++-.+..| +..|..|++ +|++|+++-..
T Consensus 7 ~~~dvvIIG~G~aG-----l~aA~~l~~-~g~~v~lie~~ 40 (325)
T 2q7v_A 7 HDYDVVIIGGGPAG-----LTAAIYTGR-AQLSTLILEKG 40 (325)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHH-TTCCEEEEESS
T ss_pred ccCCEEEECCCHHH-----HHHHHHHHH-cCCcEEEEeCC
Confidence 34579999888766 678899999 99999999654
No 480
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.46 E-value=1.9e+02 Score=20.43 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=21.0
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~ 147 (387)
+||+||.|.... .+..+.+.+ .+|.+.++..
T Consensus 48 ~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~ 85 (137)
T 3cfy_A 48 KPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAH 85 (137)
T ss_dssp CCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESS
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEec
Confidence 799999998765 355554443 4777777543
No 481
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=20.44 E-value=1.5e+02 Score=26.29 Aligned_cols=39 Identities=8% Similarity=-0.044 Sum_probs=29.7
Q ss_pred CCccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 3 QRKENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 3 ~~~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+++.||+|+..+..- ..-+......|++ .|++|+++++.
T Consensus 10 ~~~~kv~ill~dg~e-~~E~~~~~~~l~~-ag~~v~~vs~~ 48 (396)
T 3uk7_A 10 ANSRTVLILCGDYME-DYEVMVPFQALQA-FGITVHTVCPG 48 (396)
T ss_dssp -CCCEEEEECCTTEE-HHHHHHHHHHHHH-TTCEEEEECTT
T ss_pred hcCCeEEEEeCCCcc-HHHHHHHHHHHHH-CCCEEEEEcCC
Confidence 334578888887665 4456777789999 99999999874
No 482
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=20.42 E-value=1.3e+02 Score=25.67 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=24.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.+.++++..+.| --.++|++|.+ +|++|.++.-
T Consensus 8 ~k~vlVTGas~g---IG~~la~~l~~-~G~~Vv~~~r 40 (319)
T 3ioy_A 8 GRTAFVTGGANG---VGIGLVRQLLN-QGCKVAIADI 40 (319)
T ss_dssp TCEEEEETTTST---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEcCCchH---HHHHHHHHHHH-CCCEEEEEEC
Confidence 356777766543 24678999999 9999988763
No 483
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=20.39 E-value=1.8e+02 Score=23.90 Aligned_cols=43 Identities=7% Similarity=-0.052 Sum_probs=29.7
Q ss_pred HHHHHHHHhhhhccCCCCCeEEEeCCCc---------hhhHHHHHHhCCceEEEcch
Q 040467 100 PHFRKLINGLIDEQNGHKPVCIIADMFF---------AWSAEIAQEYGIFNALFVGG 147 (387)
Q Consensus 100 ~~~~~ll~~~~~~~~~~~pD~vV~D~~~---------~~~~~~a~~lgiP~v~~~~~ 147 (387)
+.+.+.++++.. +.|+||+|-.- ...+.+|+.++.|++.+...
T Consensus 119 ~~I~~~~~~l~~-----~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~ 170 (242)
T 3qxc_A 119 DNLTQRLHNFTK-----TYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHD 170 (242)
T ss_dssp HHHHHHHHHGGG-----TCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECC
T ss_pred HHHHHHHHHHHh-----cCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcC
Confidence 445555555532 68999988631 24478999999999887643
No 484
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=20.35 E-value=1.6e+02 Score=20.70 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=21.2
Q ss_pred CCeEEEeCCCch-------hhHHHHHH-----hCCceEEEcchh
Q 040467 117 KPVCIIADMFFA-------WSAEIAQE-----YGIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~-------~~~~~a~~-----lgiP~v~~~~~~ 148 (387)
+||+||.|.... .+..+.+. -++|++.++...
T Consensus 47 ~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 90 (140)
T 2qr3_A 47 NPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYA 90 (140)
T ss_dssp CEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGG
T ss_pred CCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCC
Confidence 799999998653 34444433 268888876543
No 485
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=20.34 E-value=83 Score=25.79 Aligned_cols=32 Identities=16% Similarity=0.100 Sum_probs=26.3
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++|.|+-.+..|. .+|+.|++ +||+|++...
T Consensus 19 ~~kIgiIG~G~mG~-----alA~~L~~-~G~~V~~~~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGR-----TMAGALAD-LGHEVTIGTR 50 (245)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHH-TTCEEEEEES
T ss_pred CCeEEEECCCHHHH-----HHHHHHHH-CCCEEEEEeC
Confidence 46899998877764 57999999 9999998854
No 486
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=20.30 E-value=1.3e+02 Score=21.94 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=24.0
Q ss_pred EEEEcCCCcccHHHH-HHHHHHHHhCCCcEEEEEeCCc
Q 040467 8 IVMFPLMAQGHTIPF-LALALHLENTNRYTITFVNTPS 44 (387)
Q Consensus 8 il~~~~~~~GH~~P~-l~la~~L~~~rGh~Vt~~~~~~ 44 (387)
|+++-.-..|+..-+ -.|++.|.+ +|++|.++...+
T Consensus 4 i~I~y~S~tGnT~~~A~~ia~~l~~-~g~~v~~~~~~~ 40 (148)
T 3f6r_A 4 VLIVFGSSTGNTESIAQKLEELIAA-GGHEVTLLNAAD 40 (148)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHHHT-TTCEEEEEETTT
T ss_pred EEEEEECCCchHHHHHHHHHHHHHh-CCCeEEEEehhh
Confidence 444433356877654 446778888 999999986544
No 487
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=20.30 E-value=2e+02 Score=19.24 Aligned_cols=30 Identities=20% Similarity=0.115 Sum_probs=20.2
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcc
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVG 146 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~ 146 (387)
+||+||.|.... .+..+.+.+ ++|.+.++.
T Consensus 45 ~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 45 NYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp CCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 799999998765 344444433 478777654
No 488
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=20.29 E-value=1.5e+02 Score=20.64 Aligned_cols=32 Identities=9% Similarity=0.091 Sum_probs=19.8
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-----CCceEEEcchh
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-----GIFNALFVGGG 148 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-----giP~v~~~~~~ 148 (387)
+||+||.|.... .+..+.+.+ ++|.+.++...
T Consensus 51 ~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 51 TPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp CCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 799999998765 344444432 58888776543
No 489
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=20.27 E-value=83 Score=26.96 Aligned_cols=32 Identities=9% Similarity=0.051 Sum_probs=22.9
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
|+|+++- +.|-+ -..|+++|.+ +||+|+.+.-
T Consensus 14 M~ilVtG--atG~i--G~~l~~~L~~-~g~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLG--ATGLL--GHHAARAIRA-AGHDLVLIHR 45 (342)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHHH-TTCEEEEEEC
T ss_pred CEEEEEC--CCcHH--HHHHHHHHHH-CCCEEEEEec
Confidence 4676664 33433 3578999999 9999999874
No 490
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=20.26 E-value=1.9e+02 Score=20.13 Aligned_cols=31 Identities=10% Similarity=0.119 Sum_probs=21.4
Q ss_pred CCeEEEeCCCch--hhHHHHHHh-------CCceEEEcch
Q 040467 117 KPVCIIADMFFA--WSAEIAQEY-------GIFNALFVGG 147 (387)
Q Consensus 117 ~pD~vV~D~~~~--~~~~~a~~l-------giP~v~~~~~ 147 (387)
+||+||.|...+ .+..+++.+ .+|.+.++..
T Consensus 51 ~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (129)
T 3h1g_A 51 DTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAE 90 (129)
T ss_dssp TCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESC
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCC
Confidence 589999998776 455555542 4788877653
No 491
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=20.22 E-value=97 Score=27.35 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=31.2
Q ss_pred ccEEEEEcC--CCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 5 KENIVMFPL--MAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 5 ~~~il~~~~--~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+++++.+.. |+.|-..-...||..|++ +|++|.++-..
T Consensus 142 ~~kvIav~s~KGGvGKTT~a~nLA~~La~-~g~rVlliD~D 181 (373)
T 3fkq_A 142 KSSVVIFTSPCGGVGTSTVAAACAIAHAN-MGKKVFYLNIE 181 (373)
T ss_dssp SCEEEEEECSSTTSSHHHHHHHHHHHHHH-HTCCEEEEECC
T ss_pred CceEEEEECCCCCChHHHHHHHHHHHHHh-CCCCEEEEECC
Confidence 455555544 688999999999999999 99999999754
No 492
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=20.20 E-value=83 Score=26.76 Aligned_cols=32 Identities=9% Similarity=0.037 Sum_probs=22.6
Q ss_pred EEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeCC
Q 040467 7 NIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNTP 43 (387)
Q Consensus 7 ~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~~ 43 (387)
+|+++- +.|.+ -..++++|.+ +||+|++++-.
T Consensus 6 ~ilVtG--atG~i--G~~l~~~L~~-~g~~V~~~~R~ 37 (321)
T 3c1o_A 6 KIIIYG--GTGYI--GKFMVRASLS-FSHPTFIYARP 37 (321)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHH-TTCCEEEEECC
T ss_pred EEEEEc--CCchh--HHHHHHHHHh-CCCcEEEEECC
Confidence 466654 33433 2468999999 99999998754
No 493
>2xdq_B Light-independent protochlorophyllide reductase S; oxidoreductase, DPOR, (bacterio)chlorophyll biosynthesis, photosynthesis; 2.40A {Thermosynechococcus elongatus}
Probab=20.18 E-value=71 Score=29.79 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=25.6
Q ss_pred HHHHHHHhhhhccCCCCCeEEEeCCCchhhHHHHHHhCCceEEE
Q 040467 101 HFRKLINGLIDEQNGHKPVCIIADMFFAWSAEIAQEYGIFNALF 144 (387)
Q Consensus 101 ~~~~ll~~~~~~~~~~~pD~vV~D~~~~~~~~~a~~lgiP~v~~ 144 (387)
.+++++++. +||++|.+. ....+++++|||++.+
T Consensus 363 el~~~i~~~-------~pDl~ig~~---~~r~~a~k~gip~~~i 396 (511)
T 2xdq_B 363 VVGDAIARV-------EPAAIFGTQ---MERHVGKRLNIPCGVI 396 (511)
T ss_dssp HHHHHHHHH-------CCSEEEECH---HHHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc-------CCCEEEecc---chHHHHHhcCCCeEec
Confidence 455566666 899999764 3667789999999886
No 494
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=20.17 E-value=1.1e+02 Score=24.29 Aligned_cols=43 Identities=14% Similarity=0.080 Sum_probs=23.3
Q ss_pred CCCCccEEEEEcCCCcccHHHHHHHH---HHHH--hCCCcEEEEEeCCc
Q 040467 1 MAQRKENIVMFPLMAQGHTIPFLALA---LHLE--NTNRYTITFVNTPS 44 (387)
Q Consensus 1 ~~~~~~~il~~~~~~~GH~~P~l~la---~~L~--~~rGh~Vt~~~~~~ 44 (387)
|||+|.-|++.+......+.-.+.+- +.+. + .|++|++++...
T Consensus 3 m~m~~v~ill~~g~~~~e~~~~~~~l~~a~~~~~~~-~~~~v~~vs~~~ 50 (212)
T 3efe_A 3 MQTKKAFLYVFNTMSDWEYGYLIAELNSGRYFKKDL-APLKVITVGANK 50 (212)
T ss_dssp --CCCEEEEECTTCCTTTTHHHHHHHHHCTTSCTTC-CCCCEEEEESSS
T ss_pred CcccEEEEEECCCccHHHHHHHHHHHHhhhccccCC-CCeEEEEEECCC
Confidence 56776555555555544544333222 2222 5 699999998754
No 495
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=20.16 E-value=78 Score=27.14 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=22.2
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
++|+++- +.|-+ -.+|+++|.+ +||+|+.+.-
T Consensus 4 ~~vlVtG--atG~i--G~~l~~~L~~-~G~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITG--IRGQD--GAYLAKLLLE-KGYEVYGADR 35 (345)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHH-TTCEEEEECS
T ss_pred CEEEEEC--CCChH--HHHHHHHHHH-CCCEEEEEEC
Confidence 3565553 33433 3578999999 9999998863
No 496
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=20.13 E-value=1.8e+02 Score=24.58 Aligned_cols=66 Identities=17% Similarity=0.286 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhCCCcEEEEEcCCCCCCCCcchhcccCCchhHHHHhccCCCcEEeccccCHHHhhCccCcceeeeccChh
Q 040467 294 QMMQLAMALEACGKNFIWVVKPPLGFDMNSEFRANEWLPEGFEERIKDSGQGLVVQKWAPQVEILSHKSISAFLSHCGWN 373 (387)
Q Consensus 294 ~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~pq~~lL~~~~~~~~v~HGG~~ 373 (387)
.-.++++.+++.+..+++..+.. .-+|+.+....+ ..-+-+ |+++ .=...|.+
T Consensus 154 ~~~~~~~~l~~~~~Dlivla~y~------------~il~~~~l~~~~--~~~iNi-----------HpSl--LP~~rG~~ 206 (286)
T 3n0v_A 154 QERKVLQVIEETGAELVILARYM------------QVLSPELCRRLD--GWAINI-----------HHSL--LPGFKGAK 206 (286)
T ss_dssp HHHHHHHHHHHHTCSEEEESSCC------------SCCCHHHHHHTT--TSEEEE-----------EECS--STTCCCSC
T ss_pred HHHHHHHHHHhcCCCEEEecccc------------cccCHHHHhhhc--CCeEEe-----------cccc--ccCCCCcc
Confidence 34457888888888999888876 237788777654 222223 3332 22346889
Q ss_pred HHHHHHHcCCccc
Q 040467 374 SVLEALSHRVPII 386 (387)
Q Consensus 374 s~~eal~~GvP~l 386 (387)
.+..|+.+|+...
T Consensus 207 p~~~Ai~~G~~~~ 219 (286)
T 3n0v_A 207 PYHQAYNKGVKMV 219 (286)
T ss_dssp HHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCeE
Confidence 9999999998653
No 497
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=20.08 E-value=1.1e+02 Score=28.26 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=26.5
Q ss_pred ccEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEe
Q 040467 5 KENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVN 41 (387)
Q Consensus 5 ~~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~ 41 (387)
..||.|+-.+..| |-.+|+.|.+ +|++|+..=
T Consensus 22 ~~~v~viGiG~sG----~s~~A~~l~~-~G~~V~~~D 53 (494)
T 4hv4_A 22 VRHIHFVGIGGAG----MGGIAEVLAN-EGYQISGSD 53 (494)
T ss_dssp CCEEEEETTTSTT----HHHHHHHHHH-TTCEEEEEC
T ss_pred CCEEEEEEEcHhh----HHHHHHHHHh-CCCeEEEEE
Confidence 3589999999877 4458999999 999999873
No 498
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=20.02 E-value=69 Score=26.51 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=24.3
Q ss_pred cEEEEEcCCCcccHHHHHHHHHHHHhCCCcEEEEEeC
Q 040467 6 ENIVMFPLMAQGHTIPFLALALHLENTNRYTITFVNT 42 (387)
Q Consensus 6 ~~il~~~~~~~GH~~P~l~la~~L~~~rGh~Vt~~~~ 42 (387)
.++++++.++.| -=.++|++|++ +|++|.++.-
T Consensus 28 ~k~vlVTGas~g---IG~aia~~l~~-~G~~V~~~~r 60 (260)
T 3un1_A 28 QKVVVITGASQG---IGAGLVRAYRD-RNYRVVATSR 60 (260)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHH-TTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHH-CCCEEEEEeC
Confidence 357777766532 23588999999 9999998863
Done!