Your job contains 1 sequence.
>040477
MDSNASGFLLSPSTFHSVYNQAKQDDGVIDLGLSLRTFQPEAYHPSGHSLEGYGDDLIEW
PETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDHCGYS
SLACQLEDMFVPRLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIARN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040477
(179 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2038701 - symbol:IAA32 "indole-3-acetic acid i... 433 9.6e-41 1
TAIR|locus:2196184 - symbol:IAA34 "indole-3-acetic acid i... 299 1.5e-26 1
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 204 1.8e-16 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 198 7.7e-16 1
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 170 7.1e-13 1
UNIPROTKB|Q652A1 - symbol:IAA26 "Auxin-responsive protein... 166 1.9e-12 1
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 164 3.1e-12 1
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 163 3.9e-12 1
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 162 5.0e-12 1
TAIR|locus:2139890 - symbol:IAA11 "indole-3-acetic acid i... 164 7.3e-12 1
TAIR|locus:2011461 - symbol:IAA6 "indole-3-acetic acid 6"... 158 1.3e-11 1
TAIR|locus:2088324 - symbol:PAP1 "phytochrome-associated ... 159 1.7e-11 1
UNIPROTKB|Q6Z5M0 - symbol:IAA8 "Auxin-responsive protein ... 156 2.2e-11 1
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 156 2.2e-11 1
TAIR|locus:2129910 - symbol:IAA1 "indole-3-acetic acid in... 128 2.4e-11 2
UNIPROTKB|Q5NB25 - symbol:IAA3 "Auxin-responsive protein ... 156 3.3e-11 1
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 152 5.8e-11 1
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 152 5.8e-11 1
TAIR|locus:2034200 - symbol:IAA15 "indole-3-acetic acid i... 129 6.3e-11 2
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 151 7.4e-11 1
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 148 1.5e-10 1
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 145 3.2e-10 1
UNIPROTKB|Q6H543 - symbol:IAA7 "Auxin-responsive protein ... 108 8.4e-10 2
UNIPROTKB|Q9LG86 - symbol:IAA2 "Auxin-responsive protein ... 142 8.9e-10 1
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 139 1.4e-09 1
TAIR|locus:2094578 - symbol:IAA2 "indole-3-acetic acid in... 139 1.4e-09 1
TAIR|locus:2195820 - symbol:IAA18 "indole-3-acetic acid i... 141 1.9e-09 1
UNIPROTKB|Q6AT10 - symbol:IAA15 "Auxin-responsive protein... 137 2.2e-09 1
UNIPROTKB|Q5Z749 - symbol:IAA21 "Auxin-responsive protein... 103 1.1e-08 2
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 130 1.3e-08 1
TAIR|locus:2196573 - symbol:IAA5 "indole-3-acetic acid in... 128 2.0e-08 1
UNIPROTKB|Q5W670 - symbol:IAA18 "Auxin-responsive protein... 94 2.9e-08 2
TAIR|locus:2020255 - symbol:IAA10 "indoleacetic acid-indu... 104 6.6e-08 2
TAIR|locus:2119976 - symbol:PAP2 "AT4G29080" species:3702... 99 6.7e-08 2
UNIPROTKB|Q5VRD1 - symbol:IAA1 "Auxin-responsive protein ... 128 7.5e-08 1
UNIPROTKB|Q8LQ74 - symbol:IAA6 "Auxin-responsive protein ... 104 8.3e-08 2
UNIPROTKB|Q75GK0 - symbol:IAA11 "Auxin-responsive protein... 128 1.8e-07 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 130 3.4e-07 1
UNIPROTKB|Q6ZL57 - symbol:IAA24 "Auxin-responsive protein... 125 5.5e-07 1
UNIPROTKB|Q75GK1 - symbol:IAA12 "Auxin-responsive protein... 125 6.3e-07 1
TAIR|locus:2129900 - symbol:IAA14 "indole-3-acetic acid i... 122 2.1e-06 1
UNIPROTKB|Q6AT33 - symbol:IAA19 "Auxin-responsive protein... 92 2.3e-06 2
TAIR|locus:2084933 - symbol:IAA16 "indoleacetic acid-indu... 120 5.0e-06 1
TAIR|locus:2116505 - symbol:IAA29 "indole-3-acetic acid i... 118 1.2e-05 1
TAIR|locus:2018374 - symbol:AXR3 "AT1G04250" species:3702... 91 1.5e-05 2
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 121 2.0e-05 1
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 119 4.1e-05 1
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 119 4.6e-05 1
TAIR|locus:2094598 - symbol:IAA7 "indole-3-acetic acid 7"... 110 0.00013 1
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 114 0.00020 1
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 113 0.00026 1
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 113 0.00027 1
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 113 0.00037 1
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 110 0.00056 1
TAIR|locus:2174562 - symbol:IAA33 "indole-3-acetic acid i... 100 0.00084 1
>TAIR|locus:2038701 [details] [associations]
symbol:IAA32 "indole-3-acetic acid inducible 32"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 EMBL:CP002685
GO:GO:0009733 GO:GO:0009734 GO:GO:0009555 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 EMBL:AC006200 EMBL:AJ458329
IPI:IPI00519467 PIR:G84421 RefSeq:NP_973390.1 UniGene:At.42513
IntAct:Q8RYC6 PRIDE:Q8RYC6 EnsemblPlants:AT2G01200.2 GeneID:814648
KEGG:ath:AT2G01200 GeneFarm:3190 TAIR:At2g01200 eggNOG:NOG327040
InParanoid:Q8RYC6 OMA:DVPWKEF PhylomeDB:Q8RYC6
ProtClustDB:CLSN2681132 Genevestigator:Q8RYC6 Uniprot:Q8RYC6
Length = 191
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 97/187 (51%), Positives = 123/187 (65%)
Query: 1 MDSNA-SGFLLSPSTFHSVYNQAKQDDGVIDLGLSLRTFQPEAYHPSGH--SLEGYGDDL 57
MD N + F S FH+ Y+Q K+ GVIDLGLSLRT Q E Y P L+GYG+ L
Sbjct: 1 MDPNTPADFFKGSSKFHTYYSQTKKGGGVIDLGLSLRTIQHETYLPPARMIGLDGYGE-L 59
Query: 58 IEW--PETN--LQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICI 113
I+W P N QLK+ + Q L + + E E S+ ++AYVKVN+DG++VGRK+C+
Sbjct: 60 IDWSQPSYNSITQLKSEDTGHQRLAQGYYNNEGE---SRGKYAYVKVNLDGLVVGRKVCL 116
Query: 114 LDHCGYSSLACQLEDMFVPRL--GLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESV 171
+D Y++LA QL DMF + GLRLFQ SEFSL+Y+D E WR VGDVPW EFVESV
Sbjct: 117 VDQGAYATLALQLNDMFGMQTVSGLRLFQTESEFSLVYRDREGIWRNVGDVPWKEFVESV 176
Query: 172 KRLRIAR 178
R+RIAR
Sbjct: 177 DRMRIAR 183
>TAIR|locus:2196184 [details] [associations]
symbol:IAA34 "indole-3-acetic acid inducible 34"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC012189 EMBL:AJ458327
EMBL:AF334713 IPI:IPI00539053 PIR:B86284 RefSeq:NP_172959.2
UniGene:At.17166 IntAct:Q9C5X0 DNASU:838070
EnsemblPlants:AT1G15050.1 GeneID:838070 KEGG:ath:AT1G15050
GeneFarm:3196 TAIR:At1g15050 eggNOG:NOG305135 HOGENOM:HOG000090886
OMA:RITRRND PhylomeDB:Q9C5X0 ProtClustDB:CLSN2915091
ArrayExpress:Q9C5X0 Genevestigator:Q9C5X0 GermOnline:AT1G15050
Uniprot:Q9C5X0
Length = 185
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 74/174 (42%), Positives = 93/174 (53%)
Query: 12 PSTFHSVYNQAKQDDGVIDLGLSLRTFQ--PEAYHPSGHSLEGYGDDLIEWPETNLQLKN 69
P H V + +Q D + L T P P+ Y E+ + L
Sbjct: 7 PHPLHLVASDKQQKDHKLILSWKKPTMDSDPLGVFPNSPKYHPYYSQTTEFGGV-IDLGL 65
Query: 70 SNRRFQGLVEEDVDEEA---EGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQL 126
S R Q + + EG + K W YVKV MDG++VGRK+C+LDH YS+LA QL
Sbjct: 66 SLRTIQHEIYHSSGQRYCSNEGYRRK--WGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQL 123
Query: 127 EDMFVPRL--GLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
EDMF + GLRLFQ SEF L+Y+D E WR GDVPW EF+ESV+RLRI R
Sbjct: 124 EDMFGMQSVSGLRLFQMESEFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITR 177
Score = 121 (47.7 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 28/56 (50%), Positives = 33/56 (58%)
Query: 1 MDSNASGFLLSPSTFHSVYNQAKQDDGVIDLGLSLRTFQPEAYHPSGH---SLEGY 53
MDS+ G + +H Y+Q + GVIDLGLSLRT Q E YH SG S EGY
Sbjct: 33 MDSDPLGVFPNSPKYHPYYSQTTEFGGVIDLGLSLRTIQHEIYHSSGQRYCSNEGY 88
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 48/114 (42%), Positives = 67/114 (58%)
Query: 78 VEEDVDEEA-EGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFV---P- 132
V++D ++ + + K + ++KVNMDGV +GRK+ + H Y +LA LEDMF P
Sbjct: 111 VKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLEDMFFRTNPG 170
Query: 133 RLGL--------RLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
+GL RL SEF L Y+D E +W VGDVPW F+ SVKRLR+ +
Sbjct: 171 TVGLTSQFTKPLRLLDGSSEFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRVMK 224
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 44/89 (49%), Positives = 54/89 (60%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLG---------LRLFQARSEFSL 147
+VKVNMDGV +GRK+ + H Y +LA LE+MF G LRL S+F L
Sbjct: 126 FVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGTTCREKVKPLRLLDGSSDFVL 185
Query: 148 LYKDGEENWRTVGDVPWTEFVESVKRLRI 176
Y+D E +W VGDVPW F+ SVKRLRI
Sbjct: 186 TYEDKEGDWMLVGDVPWRMFINSVKRLRI 214
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 45/105 (42%), Positives = 58/105 (55%)
Query: 77 LVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF-VPRLG 135
++EE+ E + S YVKVNM+GV +GRKI +L GY L L+ MF L
Sbjct: 68 IMEEEEQNECNSVGS----FYVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILW 123
Query: 136 LRLFQARSEFS--LLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
SE S L Y D E +W VGDVPW F+ SV+RL+I+R
Sbjct: 124 AEEEDMCSEKSHVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISR 168
>UNIPROTKB|Q652A1 [details] [associations]
symbol:IAA26 "Auxin-responsive protein IAA26" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AP005681 EMBL:AK111128 RefSeq:NP_001063732.1 UniGene:Os.57199
EnsemblPlants:LOC_Os09g35870.1 GeneID:4347643
KEGG:dosa:Os09t0527700-01 KEGG:osa:4347643 Gramene:Q652A1
eggNOG:NOG296772 OMA:WEHAVVY ProtClustDB:CLSN2697868 Uniprot:Q652A1
Length = 140
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 45/132 (34%), Positives = 66/132 (50%)
Query: 50 LEGYGDDLIEWPETNLQLKNSNRRF--QGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMV 107
+ YGDD +E E L ++ R +G + IQ+ +VKV+MDG
Sbjct: 1 MASYGDDGVELTELTLGPPGASARRARRGRKNGHPPPSSSMIQAAY---FVKVSMDGTPY 57
Query: 108 GRKICILDHCGYSSLACQLEDMFV-PRLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTE 166
RK+ + + Y L L DMF +GL E +++Y+DG+ +W VGDVPW
Sbjct: 58 LRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGYGEWEHAVVYEDGDGDWMLVGDVPWEM 117
Query: 167 FVESVKRLRIAR 178
FV S KR+R+ R
Sbjct: 118 FVSSCKRMRVMR 129
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 44/126 (34%), Positives = 63/126 (50%)
Query: 57 LIEWPETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDH 116
++ WP KN+ Q L D EA+ Q + YVKV+MDG RK+ + +
Sbjct: 117 VVGWPPIRSYRKNTMATNQ-LKSSKEDAEAKQGQG---FLYVKVSMDGAPYLRKVDLKTY 172
Query: 117 CGYSSLACQLEDMFVP----RLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVK 172
Y L+ LE MF+ + GL + E+ L Y+D + +W VGDVPW F S +
Sbjct: 173 KNYKDLSTALEKMFIGFTTGKDGLSESRKDGEYVLTYEDKDGDWMLVGDVPWEMFANSCR 232
Query: 173 RLRIAR 178
RLRI +
Sbjct: 233 RLRIMK 238
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 43/104 (41%), Positives = 58/104 (55%)
Query: 78 VEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF-VPRLGL 136
VEE+ + E + S YVKVNM+GV +GRKI ++ GY L L+ MF L
Sbjct: 71 VEEEEENECNSVGS----FYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWA 126
Query: 137 RLFQARSEFS--LLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
+E S L Y D E +W VGDVPW F+ +V+RL+I+R
Sbjct: 127 EEEDMCNEKSHVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISR 170
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 38/122 (31%), Positives = 70/122 (57%)
Query: 57 LIEWPETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDH 116
++ WP +++S R ++E++ ++ E + KE YVK+NM+GV +GRK+ + +
Sbjct: 49 VVGWPP----VRSSRRNLTAQLKEEMKKK-ESDEEKE--LYVKINMEGVPIGRKVNLSAY 101
Query: 117 CGYSSLACQLEDMFVPRLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRI 176
Y L+ ++ +F + L +++L+Y+D E + VGDVPW FV +VKRL +
Sbjct: 102 NNYQQLSHAVDQLFSKKDSWDL---NRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHV 158
Query: 177 AR 178
+
Sbjct: 159 LK 160
>TAIR|locus:2139890 [details] [associations]
symbol:IAA11 "indole-3-acetic acid inducible 11"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0009506
GO:GO:0005634 EMBL:CP002687 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AL161573 HOGENOM:HOG000238261
IPI:IPI00846427 RefSeq:NP_001078460.1 UniGene:At.25401
STRING:A8MR39 EnsemblPlants:AT4G28640.2 GeneID:828982
KEGG:ath:AT4G28640 OMA:RTADSMA ProtClustDB:CLSN2685745
Genevestigator:A8MR39 Uniprot:A8MR39
Length = 302
Score = 164 (62.8 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 41/97 (42%), Positives = 55/97 (56%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFV-PRLGLRLFQA-------------- 141
+VKV MDG+ +GRKI + H Y SL+ LE+MF+ P+LG R +
Sbjct: 138 FVKVTMDGIPIGRKIDLNAHKCYESLSNTLEEMFLKPKLGSRTLETDGHMETPVKILPDG 197
Query: 142 RSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
S L Y+D E +W VGDVPW F+ SV+RLRI +
Sbjct: 198 SSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMK 234
>TAIR|locus:2011461 [details] [associations]
symbol:IAA6 "indole-3-acetic acid 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;IMP] [GO:0009704 "de-etiolation"
evidence=IMP] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AC019018 GO:GO:0009704 HOGENOM:HOG000238261
KO:K14484 ProtClustDB:CLSN2679755 EMBL:U18408 EMBL:AF336915
EMBL:AY085353 IPI:IPI00524882 PIR:E96569 PIR:S58493
RefSeq:NP_175692.1 UniGene:At.10795 IntAct:Q38824 STRING:Q38824
EnsemblPlants:AT1G52830.1 GeneID:841717 KEGG:ath:AT1G52830
GeneFarm:3152 TAIR:At1g52830 eggNOG:NOG305797 InParanoid:Q38824
OMA:MFKESCK PhylomeDB:Q38824 Genevestigator:Q38824
GermOnline:AT1G52830 Uniprot:Q38824
Length = 189
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF-VPRLGLRLFQARSEFSLLYKDGEEN 155
YVKV+MDGV RKI + Y +L LE++F +G+ + E+ ++Y+D + +
Sbjct: 95 YVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKCEYIIIYEDKDRD 154
Query: 156 WRTVGDVPWTEFVESVKRLRIAR 178
W VGDVPW F ES KRLRI +
Sbjct: 155 WMLVGDVPWQMFKESCKRLRIVK 177
>TAIR|locus:2088324 [details] [associations]
symbol:PAP1 "phytochrome-associated protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0006995 "cellular response to
nitrogen starvation" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AP000373 HOGENOM:HOG000238261
UniGene:At.16067 ProtClustDB:CLSN2679451 EMBL:AF088281
EMBL:AF332394 EMBL:AF332401 EMBL:AF386948 EMBL:AY072502
EMBL:AY087745 IPI:IPI00539954 RefSeq:NP_188271.1 UniGene:At.20072
UniGene:At.47260 IntAct:Q8LAL2 EnsemblPlants:AT3G16500.1
GeneID:820898 KEGG:ath:AT3G16500 GeneFarm:3185 TAIR:At3g16500
eggNOG:NOG303951 InParanoid:Q8LAL2 OMA:DEEDHSA PhylomeDB:Q8LAL2
Genevestigator:Q8LAL2 GermOnline:AT3G16500 Uniprot:Q8LAL2
Length = 269
Score = 159 (61.0 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 39/119 (32%), Positives = 64/119 (53%)
Query: 76 GLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLG 135
G + + D E + +++K+ +VK+NMDGV +GRK+ + + Y L+ ++ +F L
Sbjct: 133 GQINKSDDGEKQ-VETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLA 191
Query: 136 LR---------------LFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIARN 179
+ L + EF+L Y+D E + VGDVPW FV SVKRLR+ ++
Sbjct: 192 AQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKS 250
>UNIPROTKB|Q6Z5M0 [details] [associations]
symbol:IAA8 "Auxin-responsive protein IAA8" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000005696
eggNOG:NOG267119 EMBL:AP005113 EMBL:AK066518 EMBL:AK108275
RefSeq:NP_001047972.1 UniGene:Os.55536
EnsemblPlants:LOC_Os02g49160.1 GeneID:4330571
KEGG:dosa:Os02t0723400-02 KEGG:osa:4330571 Gramene:Q6Z5M0
Uniprot:Q6Z5M0
Length = 205
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 40/103 (38%), Positives = 53/103 (51%)
Query: 88 GIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEFS- 146
G + R +VKV M+GV +GRK+ +L GY L +L MF R + +F+
Sbjct: 96 GGHGRRRSLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMF--RASITYHHCHRQFAV 153
Query: 147 -----------LLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
L Y+D E +W GDVPW F+ SVKRLRIAR
Sbjct: 154 VGMKTNKVHHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIAR 196
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 38/94 (40%), Positives = 54/94 (57%)
Query: 87 EGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPR-LGLRLFQARS-E 144
E +K YVKV+MDGV RK+ + GY LA L+ +F R +G+ L + E
Sbjct: 88 EASTTKVGLGYVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKDGDNCE 147
Query: 145 FSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
+ +Y+D + +W GDVPW F+ES KRLRI +
Sbjct: 148 YVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMK 181
>TAIR|locus:2129910 [details] [associations]
symbol:IAA1 "indole-3-acetic acid inducible" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:Z97336
EMBL:AL161539 HOGENOM:HOG000238261 EMBL:L15448 EMBL:AY133714
IPI:IPI00539077 PIR:A71408 RefSeq:NP_193192.1 UniGene:At.43941
IntAct:P49677 STRING:P49677 DNASU:827103 EnsemblPlants:AT4G14560.1
GeneID:827103 KEGG:ath:AT4G14560 GeneFarm:3140 TAIR:At4g14560
eggNOG:NOG329801 InParanoid:P49677 OMA:CQKLRIM PhylomeDB:P49677
ProtClustDB:CLSN2681778 Genevestigator:P49677 GermOnline:AT4G14560
Uniprot:P49677
Length = 168
Score = 128 (50.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 34/86 (39%), Positives = 45/86 (52%)
Query: 96 AYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF---VPRLGLRLFQARSEFSLLYKDG 152
+YVKV+MDG RKI + + Y L LE+MF V R S F Y+D
Sbjct: 75 SYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFTVGEYSEREGYKGSGFVPTYEDK 134
Query: 153 EENWRTVGDVPWTEFVESVKRLRIAR 178
+ +W VGDVPW F S ++LRI +
Sbjct: 135 DGDWMLVGDVPWDMFSSSCQKLRIMK 160
Score = 40 (19.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 57 LIEWPETNLQLKNSNRRFQGLVEEDVD 83
++ WP KN+N + V+ +D
Sbjct: 56 IVGWPPVRSNRKNNNNKNVSYVKVSMD 82
>UNIPROTKB|Q5NB25 [details] [associations]
symbol:IAA3 "Auxin-responsive protein IAA3" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AP001550 EMBL:AP001859 EMBL:AK104654
RefSeq:NP_001042495.1 UniGene:Os.12733
EnsemblPlants:LOC_Os01g13030.1 EnsemblPlants:LOC_Os01g13030.2
GeneID:4325890 KEGG:dosa:Os01t0231000-01 KEGG:osa:4325890
Gramene:Q5NB25 OMA:CHIVFRS Uniprot:Q5NB25
Length = 263
Score = 156 (60.0 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 57 LIEWPETNLQLKNSNRRFQ-GLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILD 115
++ WP KN+ Q +EDVD + +G + + YVKV+MDG RK+ +
Sbjct: 124 VVGWPPIRSYRKNTMATNQIKSNKEDVDAK-QG----QGFLYVKVSMDGAPYLRKVDLKT 178
Query: 116 HCGYSSLACQLEDMFVP----RLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESV 171
+ Y ++ LE MF+ + G Q E+ L Y+D + +W VGDVPW F +S
Sbjct: 179 YKNYKDMSLGLEKMFIGFSTGKEGAEN-QKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSC 237
Query: 172 KRLRIAR 178
+RLRI +
Sbjct: 238 RRLRIMK 244
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 38/85 (44%), Positives = 49/85 (57%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGL---RLFQARSEFSLLYKDGE 153
+VKV+MDG RKI + + GYS L LE MF +G R SE++ Y+D +
Sbjct: 94 FVKVSMDGAPYLRKIDLRVYGGYSELLKALETMFKLTIGEYSEREGYKGSEYAPTYEDKD 153
Query: 154 ENWRTVGDVPWTEFVESVKRLRIAR 178
+W VGDVPW FV S KRLRI +
Sbjct: 154 GDWMLVGDVPWDMFVTSCKRLRIMK 178
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEFSLLYKDGEENW 156
+VKV M+GV +GRK+ + GY SL L MF + + + R L Y+D + +W
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSI-ICGNRDRKHHVLTYEDKDGDW 132
Query: 157 RTVGDVPWTEFVESVKRLRIAR 178
VGD+PW F+E+V+RL+I R
Sbjct: 133 MMVGDIPWDMFLETVRRLKITR 154
>TAIR|locus:2034200 [details] [associations]
symbol:IAA15 "indole-3-acetic acid inducible 15"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC018848 HOGENOM:HOG000238261
EMBL:AJ441300 IPI:IPI00525123 PIR:F96835 PIR:S58502
RefSeq:NP_178155.1 UniGene:At.33908 IntAct:Q9C966
EnsemblPlants:AT1G80390.1 GeneID:844379 KEGG:ath:AT1G80390
GeneFarm:3170 TAIR:At1g80390 eggNOG:NOG283386 InParanoid:Q9C966
OMA:FTALENM PhylomeDB:Q9C966 ProtClustDB:CLSN2914430
Genevestigator:Q9C966 Uniprot:Q9C966
Length = 179
Score = 129 (50.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 94 RWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGL-RL--FQARSEFSLLYK 150
R YVKV +DG RK+ + + Y L LE+MF + + R+ + + EF Y+
Sbjct: 85 RRKYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICRVTELERKGEFVATYE 144
Query: 151 DGEENWRTVGDVPWTEFVESVKRLRIAR 178
D + + VGDVPW FVES KR+R+ +
Sbjct: 145 DKDGDLMLVGDVPWMMFVESCKRMRLMK 172
Score = 35 (17.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 55 DDLIEWPETNLQLKNSNRRF 74
D L+ WP K R++
Sbjct: 69 DQLVGWPPVATARKTVRRKY 88
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 45/126 (35%), Positives = 63/126 (50%)
Query: 57 LIEWPETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDH 116
++ WP KN+ Q E + E +GI YVKV+MDG RKI + +
Sbjct: 65 IVGWPPVRSYRKNN---IQSKKNES-EHEGQGI-------YVKVSMDGAPYLRKIDLSCY 113
Query: 117 CGYSSLACQLEDMFVPRLGLRLFQAR----SEFSLLYKDGEENWRTVGDVPWTEFVESVK 172
GYS L LE MF +G F+ S+F Y+D + +W +GDVPW F+ + K
Sbjct: 114 KGYSELLKALEVMFKFSVG-EYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCK 172
Query: 173 RLRIAR 178
RLRI +
Sbjct: 173 RLRIMK 178
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 38/93 (40%), Positives = 52/93 (55%)
Query: 90 QSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQAR----SEF 145
+S+ + YVKV+MDG RKI + + Y L LE+MF +G F+ S+F
Sbjct: 83 ESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVG-EYFEREGYKGSDF 141
Query: 146 SLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
Y+D + +W VGDVPW FV S KRLRI +
Sbjct: 142 VPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMK 174
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLF---QARSEFSLLYKDGE 153
YVKV M+G+ +GRK+ + Y+ L L MF P + R +++ Y+DGE
Sbjct: 100 YVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMF-PSTNQEDGHDRRRRHPYAVTYEDGE 158
Query: 154 ENWRTVGDVPWTEFVESVKRLRI 176
+W VGDVPW F +SVKRL+I
Sbjct: 159 GDWMQVGDVPWEAFAKSVKRLKI 181
>UNIPROTKB|Q6H543 [details] [associations]
symbol:IAA7 "Auxin-responsive protein IAA7" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG303951 EMBL:AP005394 EMBL:AP005756 EMBL:AK121870
RefSeq:NP_001046357.1 UniGene:Os.7355
EnsemblPlants:LOC_Os02g13520.1 GeneID:4328796
KEGG:dosa:Os02t0228900-01 KEGG:osa:4328796 Gramene:Q6H543
OMA:QEDVAIS ProtClustDB:CLSN2692586 Uniprot:Q6H543
Length = 300
Score = 108 (43.1 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 124 CQLEDMFVPRLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
CQ ED+ + GL E++L+Y+D E + VGDVPW FV SVKRLR+ +
Sbjct: 230 CQQEDVAIS--GL--LDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLK 280
Score = 86 (35.3 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 19/74 (25%), Positives = 37/74 (50%)
Query: 57 LIEWPETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDH 116
++ WP +N + +E ++A + +R ++K+NMDGV +GRKI +
Sbjct: 139 VVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAF 198
Query: 117 CGYSSLACQLEDMF 130
Y L+ ++ +F
Sbjct: 199 DSYEKLSLAVDKLF 212
>UNIPROTKB|Q9LG86 [details] [associations]
symbol:IAA2 "Auxin-responsive protein IAA2" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP002743
EMBL:AK100314 RefSeq:NP_001042263.1 UniGene:Os.19952 GeneID:4326775
KEGG:dosa:Os01t0190300-01 KEGG:osa:4326775 Gramene:Q9LG86
eggNOG:NOG325733 OMA:KRIEHAP ProtClustDB:CLSN2691155 Uniprot:Q9LG86
Length = 238
Score = 142 (55.0 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 93 ERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSE-------- 144
E+ +VK+NMDGV +GRK+ + + GY+ L+ ++ +F L + A E
Sbjct: 116 EKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGE 175
Query: 145 ------FSLLYKDGEENWRTVGDVPWTEFVESVKRLRIARN 179
++L+Y+D E + VGDVPW F+ + KRLR+ ++
Sbjct: 176 MVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKS 216
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/88 (38%), Positives = 46/88 (52%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPR--LGLRLFQARSEFS------LL 148
YVKV +G +GRK+ + H Y LA L MF G + A + +
Sbjct: 94 YVKVKKEGDAIGRKVDLALHSSYDELAATLARMFPTNDHQGEKKM-ANDDHGDAAGPVVT 152
Query: 149 YKDGEENWRTVGDVPWTEFVESVKRLRI 176
Y+DG+ +W VGDVPW +F SVKRL+I
Sbjct: 153 YEDGDGDWMLVGDVPWDDFARSVKRLKI 180
>TAIR|locus:2094578 [details] [associations]
symbol:IAA2 "indole-3-acetic acid inducible 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AB026655 HOGENOM:HOG000238261
ProtClustDB:CLSN2681778 EMBL:L15449 EMBL:AF027157 EMBL:AF332392
IPI:IPI00527263 RefSeq:NP_188943.1 UniGene:At.23539 IntAct:P49678
STRING:P49678 EnsemblPlants:AT3G23030.1 GeneID:821877
KEGG:ath:AT3G23030 GeneFarm:3142 TAIR:At3g23030 eggNOG:NOG239673
InParanoid:P49678 OMA:CEREGYK PhylomeDB:P49678
Genevestigator:P49678 GermOnline:AT3G23030 Uniprot:P49678
Length = 174
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 36/86 (41%), Positives = 46/86 (53%)
Query: 96 AYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGL---RLFQARSEFSLLYKDG 152
+YVKV+MDG RKI + + Y L LE+MF +G R S F Y+D
Sbjct: 78 SYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVMIGEYCEREGYKGSGFVPTYEDK 137
Query: 153 EENWRTVGDVPWTEFVESVKRLRIAR 178
+ +W VGDVPW F S KRLRI +
Sbjct: 138 DGDWMLVGDVPWDMFSSSCKRLRIMK 163
>TAIR|locus:2195820 [details] [associations]
symbol:IAA18 "indole-3-acetic acid inducible 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
KO:K14484 EMBL:AC015448 EMBL:AF367263 EMBL:AY056062 EMBL:AY088406
EMBL:U49074 IPI:IPI00534235 PIR:H96558 RefSeq:NP_175607.1
UniGene:At.16067 IntAct:O24408 STRING:O24408
EnsemblPlants:AT1G51950.1 GeneID:841623 KEGG:ath:AT1G51950
GeneFarm:3181 TAIR:At1g51950 eggNOG:NOG285609 InParanoid:O24408
OMA:MIPQERR PhylomeDB:O24408 ProtClustDB:CLSN2679451
Genevestigator:O24408 GermOnline:AT1G51950 Uniprot:O24408
Length = 267
Score = 141 (54.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 38/118 (32%), Positives = 58/118 (49%)
Query: 77 LVEEDVDEEAEGIQSKERWA-YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLG 135
L + D A+ + K + +VK+NM GV +GRK+ + H Y L+ ++ +F L
Sbjct: 130 LKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLA 189
Query: 136 LR---------------LFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
+ L E++L Y+D E + VGDVPW FV SVKRLR+ +
Sbjct: 190 AQRDFPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIK 247
>UNIPROTKB|Q6AT10 [details] [associations]
symbol:IAA15 "Auxin-responsive protein IAA15" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC144738 EMBL:AK061796 RefSeq:NP_001054800.1 UniGene:Os.4822
EnsemblPlants:LOC_Os05g08570.2 GeneID:4337971
KEGG:dosa:Os05t0178600-01 KEGG:osa:4337971 Gramene:Q6AT10
eggNOG:NOG312815 ProtClustDB:CLSN2691128 Uniprot:Q6AT10
Length = 212
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/99 (35%), Positives = 55/99 (55%)
Query: 91 SKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF-----VPRLG---LRLFQAR 142
S + +VKV +DG RK+ + + GY L L+D F + +LG ++L A
Sbjct: 103 SSSKAKFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAV 162
Query: 143 S--EFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIARN 179
S E+ Y+D + +W VGDVPW FVE+ +RLR+ ++
Sbjct: 163 SGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKS 201
>UNIPROTKB|Q5Z749 [details] [associations]
symbol:IAA21 "Auxin-responsive protein IAA21" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0005737
GO:GO:0009733 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351
HOGENOM:HOG000238261 eggNOG:NOG266390 EMBL:AP004784 EMBL:AK121989
RefSeq:NP_001057554.1 UniGene:Os.7687 PRIDE:Q5Z749
EnsemblPlants:LOC_Os06g22870.1 GeneID:4340939
KEGG:dosa:Os06t0335500-01 KEGG:osa:4340939 Gramene:Q5Z749
OMA:RKNTMAM ProtClustDB:CLSN2691250 Uniprot:Q5Z749
Length = 266
Score = 103 (41.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 143 SEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
+E L Y+D +E+W VGDVPW F +S +RLRI +
Sbjct: 212 TELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMK 247
Score = 80 (33.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 57 LIEWPETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDH 116
++ WP KN+ Q ++ D EA+ + YVKV+MDG RK+ + +
Sbjct: 109 VVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASG-CLYVKVSMDGAPYLRKVDLKMY 167
Query: 117 CGYSSLACQLEDMF 130
Y L+ LE MF
Sbjct: 168 KNYKELSLALEKMF 181
Score = 38 (18.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 11/54 (20%), Positives = 21/54 (38%)
Query: 45 PSGHSLEGYGDDLIEWPETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYV 98
P G + G+ D ++ P + + E + +EE + Q+ A V
Sbjct: 56 PKGGAKRGFADAIVGGPAGQRREAAGGKAAAAAAEAEEEEEKKKAQAPAAKAQV 109
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 130 (50.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 32/95 (33%), Positives = 50/95 (52%)
Query: 84 EEAEGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARS 143
E +G ++K YVKV+MDG RK+ + + GY L L+ +F + +
Sbjct: 97 ETDQGRKNKGGGLYVKVSMDGAPYLRKVDLRMYGGYRELRDALDALF-GCFSADASASAA 155
Query: 144 EFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
F++ Y+D + + GDVPW F+ S K+LRI R
Sbjct: 156 HFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMR 190
>TAIR|locus:2196573 [details] [associations]
symbol:IAA5 "indole-3-acetic acid inducible 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC013453 HOGENOM:HOG000238261
EMBL:X53436 EMBL:AY150496 EMBL:U18407 IPI:IPI00531814 PIR:G86289
PIR:S12244 PIR:S58492 RefSeq:NP_173011.1 UniGene:At.28674
IntAct:P33078 STRING:P33078 EnsemblPlants:AT1G15580.1 GeneID:838128
KEGG:ath:AT1G15580 GeneFarm:3151 TAIR:At1g15580 eggNOG:NOG305053
OMA:ESECVPI PhylomeDB:P33078 ProtClustDB:CLSN2912676
Genevestigator:P33078 GermOnline:AT1G15580 Uniprot:P33078
Length = 163
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/83 (37%), Positives = 45/83 (54%)
Query: 96 AYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEFSLLYKDGEEN 155
+YVKV++DG RKI + + Y LA L+ +F + SE +Y+D + +
Sbjct: 75 SYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGD 134
Query: 156 WRTVGDVPWTEFVESVKRLRIAR 178
W GDVPW F+ S KRLRI +
Sbjct: 135 WMLAGDVPWEMFLGSCKRLRIMK 157
>UNIPROTKB|Q5W670 [details] [associations]
symbol:IAA18 "Auxin-responsive protein IAA18" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC144740 EMBL:AK071192 RefSeq:NP_001056086.1 UniGene:Os.87732
PRIDE:Q5W670 EnsemblPlants:LOC_Os05g44810.1
EnsemblPlants:LOC_Os05g44810.2 EnsemblPlants:LOC_Os05g44810.3
GeneID:4339365 KEGG:dosa:Os05t0523300-01 KEGG:osa:4339365
Gramene:Q5W670 eggNOG:NOG327576 OMA:IRDEREW ProtClustDB:CLSN2691827
Uniprot:Q5W670
Length = 327
Score = 94 (38.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 42 AYHPSGHSLEGYGDDLIEWP-----ETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWA 96
A H S G ++ WP NL +S ++ ++ D++A+ I K+R
Sbjct: 153 AAHSSNPQGRGAIPPVVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPI-CKKR-P 210
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF 130
VK+NMDG+ +GRK+ + + Y L+ +E++F
Sbjct: 211 LVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELF 244
Score = 91 (37.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 138 LFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
L ++L+Y+D + + GD+PW FV +VKRLR+ R
Sbjct: 272 LLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMR 312
>TAIR|locus:2020255 [details] [associations]
symbol:IAA10 "indoleacetic acid-induced protein 10"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002411 GO:GO:0010200 EMBL:U18412
EMBL:AF332396 IPI:IPI00520254 PIR:S58496 RefSeq:NP_171906.1
UniGene:At.21582 IntAct:Q38828 PaxDb:Q38828 PRIDE:Q38828
EnsemblPlants:AT1G04100.1 GeneID:839290 KEGG:ath:AT1G04100
GeneFarm:3157 TAIR:At1g04100 eggNOG:NOG280843 HOGENOM:HOG000238261
InParanoid:Q38828 OMA:RTYRINS PhylomeDB:Q38828
ProtClustDB:CLSN2914368 Genevestigator:Q38828 GermOnline:AT1G04100
Uniprot:Q38828
Length = 261
Score = 104 (41.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 137 RLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
+L SE+ + Y+D + +W VGDVPW F+ SV RLRI +
Sbjct: 211 KLLDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMK 252
Score = 71 (30.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 83 DEEAEGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF 130
+++A I+S VKV MDGV++GRK+ + Y++L L+ MF
Sbjct: 139 NDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMF 186
>TAIR|locus:2119976 [details] [associations]
symbol:PAP2 "AT4G29080" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=ISS;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=RCA] [GO:0048438 "floral whorl
development" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009536 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734 EMBL:AL078470
EMBL:AL161574 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AF087936 EMBL:AJ458326 EMBL:AF332402
EMBL:AY053404 EMBL:AY133516 IPI:IPI00539897 PIR:T08963
RefSeq:NP_194637.1 UniGene:At.3406 IntAct:Q9ZSY8 STRING:Q9ZSY8
EnsemblPlants:AT4G29080.1 GeneID:829029 KEGG:ath:AT4G29080
GeneFarm:3186 TAIR:At4g29080 InParanoid:Q9ZSY8 OMA:HGGSANW
PhylomeDB:Q9ZSY8 ProtClustDB:CLSN2916037 Genevestigator:Q9ZSY8
GermOnline:AT4G29080 Uniprot:Q9ZSY8
Length = 305
Score = 99 (39.9 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 143 SEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIARN 179
SE+ + Y+D + +W VGDVPW F+ S K+LRI ++
Sbjct: 251 SEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKS 287
Score = 80 (33.2 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 26/77 (33%), Positives = 36/77 (46%)
Query: 57 LIEWPETNLQLKNS--NRRFQGLVEEDVDEEAEGIQSKER-WAYVKVNMDGVMVGRKICI 113
++ WP KNS + + Q EEAE E+ YVKV+M+G RKI +
Sbjct: 144 VVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDL 203
Query: 114 LDHCGYSSLACQLEDMF 130
+ Y L+ LE MF
Sbjct: 204 KTYKSYLELSSALEKMF 220
>UNIPROTKB|Q5VRD1 [details] [associations]
symbol:IAA1 "Auxin-responsive protein IAA1" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2691128 EMBL:AP002524 EMBL:AP002903 EMBL:AK109373
RefSeq:NP_001042192.1 UniGene:Os.9069
EnsemblPlants:LOC_Os01g08320.1 GeneID:4323871
KEGG:dosa:Os01t0178500-02 Gramene:Q5VRD1 eggNOG:NOG252529
OMA:FADDERK Uniprot:Q5VRD1
Length = 199
Score = 128 (50.1 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLF--QAR--------SEFS 146
+VKV +DG RK+ + + GY L L+D F +R F R +E+
Sbjct: 95 FVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYV 154
Query: 147 LLYKDGEENWRTVGDVPWTEFVESVKRLRIARN 179
Y+D + +W VGDVPW FVE+ +RLR+ ++
Sbjct: 155 PTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKS 187
>UNIPROTKB|Q8LQ74 [details] [associations]
symbol:IAA6 "Auxin-responsive protein IAA6" species:39947
"Oryza sativa Japonica Group" [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=IC] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733 GO:GO:0006417
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2691827 eggNOG:NOG303951 EMBL:AP003768
EMBL:AK068600 RefSeq:NP_001044208.1 UniGene:Os.75606 STRING:Q8LQ74
DNASU:4326541 EnsemblPlants:LOC_Os01g53880.2
EnsemblPlants:LOC_Os01g53880.3 EnsemblPlants:LOC_Os01g53880.4
EnsemblPlants:LOC_Os01g53880.5 EnsemblPlants:LOC_Os01g53880.6
GeneID:4326541 KEGG:dosa:Os01t0741900-01 KEGG:osa:4326541
Gramene:Q8LQ74 Uniprot:Q8LQ74
Length = 335
Score = 104 (41.7 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 137 RLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIARN 179
+L E++L+Y+D E + VGDVPW FV + KRLR+ R+
Sbjct: 279 QLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRS 321
Score = 74 (31.1 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 98 VKVNMDGVMVGRKICILDHCGYSSLACQLEDMF 130
VK+NMDG+ +GRKI + + Y L+ ++ +F
Sbjct: 220 VKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLF 252
>UNIPROTKB|Q75GK0 [details] [associations]
symbol:IAA11 "Auxin-responsive protein IAA11" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009753 GO:GO:0009611 GO:GO:0009734 GO:GO:0006355
GO:GO:0009414 GO:GO:0006351 GO:GO:0009630 GO:GO:0010102
EMBL:AC145379 EMBL:AC145780 EnsemblPlants:LOC_Os03g43400.1
KEGG:dosa:Os03t0633500-00 Gramene:Q75GK0 eggNOG:NOG281606
OMA:PELSMAF Uniprot:Q75GK0
Length = 233
Score = 128 (50.1 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 35/94 (37%), Positives = 51/94 (54%)
Query: 96 AYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF----VPRLGL--RLFQARS-----E 144
A VKV+MDG RKI + + Y L+ ++MF + + G +L ++ E
Sbjct: 123 ALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQLKESNKLRDDLE 182
Query: 145 FSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
+ Y+D + +W VGDVPW FVES KRLRI +
Sbjct: 183 YVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMK 216
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 130 (50.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 38/105 (36%), Positives = 56/105 (53%)
Query: 79 EEDVDEEAEG----IQSKERWAY---VKVNMDGVMVGRKICILDHCGYSSLACQLEDMFV 131
EE E AEG +QSK+ + KV M GV VGR + + GY+ L +E +F
Sbjct: 500 EEKKQEPAEGSPKEVQSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFD 559
Query: 132 PRLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRI 176
+ LR +R+++ +++ D E + VGD PW EF VKR+ I
Sbjct: 560 IKGELR---SRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 601
>UNIPROTKB|Q6ZL57 [details] [associations]
symbol:IAA24 "Auxin-responsive protein IAA24" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP003835
EMBL:AK103483 RefSeq:NP_001059051.1 UniGene:Os.8622
EnsemblPlants:LOC_Os07g08460.1 GeneID:4342573
KEGG:dosa:Os07t0182400-01 KEGG:osa:4342573 Gramene:Q6ZL57
eggNOG:NOG284204 OMA:QHAIAYE ProtClustDB:CLSN2694400 Uniprot:Q6ZL57
Length = 219
Score = 125 (49.1 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 57 LIEWPETNLQLKNSNRRFQGLVE--EDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICIL 114
++ WP +N+ + + +E + Q + YVKV+MDG RK+ L
Sbjct: 89 VVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVD-L 147
Query: 115 DHC-GYSSLACQLEDMFVPRLGLRLFQARSE--FSLLYKDGEENWRTVGDVPWTEFVESV 171
C GY L L+ +F S+ F++ Y+D + + VGDVPW F+ S
Sbjct: 148 KMCKGYRELREALDLLFTKCFSATASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSC 207
Query: 172 KRLRIAR 178
K+LRI +
Sbjct: 208 KKLRIMK 214
>UNIPROTKB|Q75GK1 [details] [associations]
symbol:IAA12 "Auxin-responsive protein IAA12" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145379 EMBL:AK073044 RefSeq:NP_001050714.1 UniGene:Os.9945
STRING:Q75GK1 EnsemblPlants:LOC_Os03g43410.1 GeneID:4333512
KEGG:dosa:Os03t0633800-01 KEGG:osa:4333512 Gramene:Q75GK1
eggNOG:NOG272839 OMA:TCKKLRI ProtClustDB:CLSN2694101 Uniprot:Q75GK1
Length = 226
Score = 125 (49.1 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 33/81 (40%), Positives = 45/81 (55%)
Query: 98 VKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEFSLLYKDGEENWR 157
VKV+MDG RKI + + GY L LE MFV G SEF++ Y+D + +
Sbjct: 131 VKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGANPSEFAITYQDKDGDLM 190
Query: 158 TVGDVPWTEFVESVKRLRIAR 178
VGDVP+ F + K+LRI +
Sbjct: 191 LVGDVPFDMFTSTCKKLRIMK 211
>TAIR|locus:2129900 [details] [associations]
symbol:IAA14 "indole-3-acetic acid inducible 14"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010102
"lateral root morphogenesis" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009741 "response
to brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0048527 "lateral root
development" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009536
GO:GO:0045892 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:Z97336 EMBL:AL161539 GO:GO:0010102
HOGENOM:HOG000238261 eggNOG:NOG281606 EMBL:AF334718 EMBL:U18416
IPI:IPI00523753 PIR:C85159 PIR:H71407 PIR:S58501 RefSeq:NP_193191.2
UniGene:At.10798 IntAct:Q38832 STRING:Q38832
EnsemblPlants:AT4G14550.1 GeneID:827102 KEGG:ath:AT4G14550
GeneFarm:3165 TAIR:At4g14550 InParanoid:Q38832 OMA:GEAEEAM
PhylomeDB:Q38832 ProtClustDB:CLSN2915039 Genevestigator:Q38832
GermOnline:AT4G14550 Uniprot:Q38832
Length = 228
Score = 122 (48.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/140 (32%), Positives = 64/140 (45%)
Query: 57 LIEWPETNLQLKN--SNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICIL 114
++ WP KN +N++ G EE + + A+VKV+MDG RK+ +
Sbjct: 77 VVGWPPVRNYRKNVMANQK-SGEAEEAMSSGGGTV------AFVKVSMDGAPYLRKVDLK 129
Query: 115 DHCGYSSLACQLEDMFVP-RLGLRLFQARSEF-------SLL--------YKDGEENWRT 158
+ Y L+ L MF +G Q +F LL Y+D + +W
Sbjct: 130 MYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWML 189
Query: 159 VGDVPWTEFVESVKRLRIAR 178
VGDVPW FVES KRLRI +
Sbjct: 190 VGDVPWPMFVESCKRLRIMK 209
>UNIPROTKB|Q6AT33 [details] [associations]
symbol:IAA19 "Auxin-responsive protein IAA19" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC144735
EMBL:AK061439 RefSeq:NP_001056300.1 UniGene:Os.8928
EnsemblPlants:LOC_Os05g48590.1 GeneID:4339588
KEGG:dosa:Os05t0559400-01 KEGG:osa:4339588 Gramene:Q6AT33
eggNOG:NOG268205 OMA:RKLRIMR ProtClustDB:CLSN2691691 Uniprot:Q6AT33
Length = 281
Score = 92 (37.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 144 EFSLLYKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
E+ L Y+D + +W VGD+PW F S ++LRI R
Sbjct: 228 EYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMR 262
Score = 73 (30.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 57 LIEWPETNLQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDH 116
++ WP KN+ + E+ +G +S+ YVKV+MDG RK+ + +
Sbjct: 128 VVGWPPVRSYRKNT---LAASATKTKGED-QG-KSEVGCCYVKVSMDGAPYLRKVDLKTY 182
Query: 117 CGYSSLACQLEDMF 130
Y L+ LE MF
Sbjct: 183 SSYEDLSLALEKMF 196
>TAIR|locus:2084933 [details] [associations]
symbol:IAA16 "indoleacetic acid-induced protein 16"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006970 "response to osmotic stress"
evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009733 GO:GO:0006417 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 GO:GO:0009416 EMBL:AC011437 HOGENOM:HOG000238261
eggNOG:NOG281606 EMBL:U49072 EMBL:AF332400 EMBL:AF375420
EMBL:BT000857 EMBL:AY087195 IPI:IPI00530628 RefSeq:NP_187124.1
UniGene:At.24121 IntAct:O24407 STRING:O24407 PRIDE:O24407
DNASU:819633 EnsemblPlants:AT3G04730.1 GeneID:819633
KEGG:ath:AT3G04730 GeneFarm:3175 TAIR:At3g04730 InParanoid:O24407
OMA:FRKNVMS PhylomeDB:O24407 ProtClustDB:CLSN2914703
Genevestigator:O24407 GermOnline:AT3G04730 Uniprot:O24407
Length = 236
Score = 120 (47.3 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 38/100 (38%), Positives = 52/100 (52%)
Query: 96 AYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFV--------PRLGLRLFQARSEF-S 146
AYVKV+MDG RKI + + Y L+ L MF P+ G++ F S+
Sbjct: 119 AYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQ-GMKDFMNESKLID 177
Query: 147 LL--------YKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
LL Y+D + +W VGDVPW FV+S KR+RI +
Sbjct: 178 LLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMK 217
>TAIR|locus:2116505 [details] [associations]
symbol:IAA29 "indole-3-acetic acid inducible 29"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0010114 "response to red
light" evidence=IEP] [GO:0010218 "response to far red light"
evidence=IEP] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010114 EMBL:AL021811
EMBL:AL161580 HOGENOM:HOG000238261 EMBL:AF380646 EMBL:AY054137
IPI:IPI00531341 PIR:T05400 RefSeq:NP_567891.1 UniGene:At.19102
IntAct:Q93WC4 STRING:Q93WC4 EnsemblPlants:AT4G32280.1 GeneID:829361
KEGG:ath:AT4G32280 GeneFarm:3189 TAIR:At4g32280 eggNOG:NOG320017
InParanoid:Q93WC4 PhylomeDB:Q93WC4 Genevestigator:Q93WC4
GermOnline:AT4G32280 Uniprot:Q93WC4
Length = 251
Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/83 (38%), Positives = 39/83 (46%)
Query: 97 YVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEFSLLYKDGEENW 156
YVKV MDGV + RK+ I Y SL L MF F+ K+G+ W
Sbjct: 161 YVKVKMDGVAIARKVDIKLFNSYESLTNSLITMFTEYEDCDREDTNYTFTFQGKEGD--W 218
Query: 157 RTVGDVPWTEFVESVKRLRIARN 179
GDV W F ESV R+ I R+
Sbjct: 219 LLRGDVTWKIFAESVHRISIIRD 241
>TAIR|locus:2018374 [details] [associations]
symbol:AXR3 "AT1G04250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009734 "auxin mediated signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009733 "response to auxin stimulus" evidence=IEP;IMP;TAS]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
EMBL:U49073 EMBL:AF040631 EMBL:AF040632 EMBL:AF336916 EMBL:AY070094
EMBL:AY117183 EMBL:AY087284 IPI:IPI00548274 PIR:H86173
RefSeq:NP_171921.1 UniGene:At.20252 IntAct:P93830 STRING:P93830
DNASU:839568 EnsemblPlants:AT1G04250.1 GeneID:839568
KEGG:ath:AT1G04250 GeneFarm:3180 TAIR:At1g04250 eggNOG:NOG250798
InParanoid:P93830 OMA:KEGSTTH PhylomeDB:P93830
ProtClustDB:CLSN2914376 Genevestigator:P93830 GermOnline:AT1G04250
Uniprot:P93830
Length = 229
Score = 91 (37.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 149 YKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
Y+D + +W VGDVPW FV++ KRLR+ +
Sbjct: 181 YEDKDGDWMLVGDVPWPMFVDTCKRLRLMK 210
Score = 63 (27.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 93 ERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMF 130
E A+VKV+MDG RKI + + Y L+ L +MF
Sbjct: 108 EAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMF 145
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 121 (47.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 28/80 (35%), Positives = 44/80 (55%)
Query: 99 KVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEFSLLYKDGEENWRT 158
KV M GV +GR + + GY L +LE +F + L Q R+++ + + D +E+
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL---QTRNQWEIAFTDSDEDKML 571
Query: 159 VGDVPWTEFVESVKRLRIAR 178
VGD PW EF VK++ I +
Sbjct: 572 VGDDPWPEFCNMVKKIFIQK 591
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 119 (46.9 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 32/91 (35%), Positives = 49/91 (53%)
Query: 89 IQSKE---RWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEF 145
IQSK+ KV M GV +GR + + GY L +LE +F + L QAR+++
Sbjct: 501 IQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL---QARNQW 557
Query: 146 SLLYKDGEENWRTVGDVPWTEFVESVKRLRI 176
+ + + EE+ VG+ PW EF VK++ I
Sbjct: 558 EIAFTNNEEDKMLVGEDPWPEFCNMVKKIFI 588
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 119 (46.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 90 QSKERWAYVKVNMDGVMVGRKICIL-DHCGYSSLACQLEDMFVPRLGLRLFQARSEFSLL 148
QS++ + KV+M G VGR I + C Y L +LE+MF + G L ++ ++ ++
Sbjct: 537 QSRQIRSCTKVHMQGSAVGRAIDLTRSEC-YEDLFKKLEEMFDIK-G-ELLESTKKWQVV 593
Query: 149 YKDGEENWRTVGDVPWTEFVESVKRLRI 176
Y D E++ VGD PW EF V+++ I
Sbjct: 594 YTDDEDDMMMVGDDPWNEFCGMVRKIFI 621
>TAIR|locus:2094598 [details] [associations]
symbol:IAA7 "indole-3-acetic acid 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0000271
"polysaccharide biosynthetic process" evidence=RCA] [GO:0007389
"pattern specification process" evidence=RCA] [GO:0008361
"regulation of cell size" evidence=RCA] [GO:0009269 "response to
desiccation" evidence=RCA] [GO:0009409 "response to cold"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009825 "multidimensional cell growth" evidence=RCA]
[GO:0009926 "auxin polar transport" evidence=RCA] [GO:0009932 "cell
tip growth" evidence=RCA] [GO:0010015 "root morphogenesis"
evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=IMP] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009753 GO:GO:0009611 GO:GO:0006417 GO:GO:0009734
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 GO:GO:0009630
GO:GO:0009416 EMBL:AB026655 HOGENOM:HOG000238261 eggNOG:NOG281606
KO:K14484 EMBL:U18409 EMBL:AF332395 EMBL:AY054651 EMBL:AY072461
EMBL:AY087765 IPI:IPI00517741 PIR:S58494 RefSeq:NP_188945.1
UniGene:At.22260 UniGene:At.67783 PDB:2P1N PDB:2P1O PDB:2P1Q
PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q DIP:DIP-33345N IntAct:Q38825
STRING:Q38825 PaxDb:Q38825 PRIDE:Q38825 DNASU:821879
EnsemblPlants:AT3G23050.1 GeneID:821879 KEGG:ath:AT3G23050
GeneFarm:3154 TAIR:At3g23050 InParanoid:Q38825 OMA:NESKLMN
PhylomeDB:Q38825 ProtClustDB:CLSN2684190 EvolutionaryTrace:Q38825
Genevestigator:Q38825 Uniprot:Q38825
Length = 243
Score = 110 (43.8 bits), Expect = 0.00013, P = 0.00013
Identities = 36/97 (37%), Positives = 48/97 (49%)
Query: 98 VKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVP-------RLGLRLFQARSEF-SLL- 148
VKV+MDG RK+ + + Y L+ L MF G+ F S+ +LL
Sbjct: 127 VKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLN 186
Query: 149 -------YKDGEENWRTVGDVPWTEFVESVKRLRIAR 178
Y+D + +W VGDVPW FVES KRLRI +
Sbjct: 187 SSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMK 223
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
Identities = 30/91 (32%), Positives = 48/91 (52%)
Query: 89 IQSKE---RWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEF 145
IQSK+ KV M GV + R + + GY L +LE++F + L Q R+++
Sbjct: 500 IQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQL---QTRNQW 556
Query: 146 SLLYKDGEENWRTVGDVPWTEFVESVKRLRI 176
+ + D +++ VGD PW EF VK++ I
Sbjct: 557 EIAFTDSDDDKMLVGDDPWPEFCNMVKKILI 587
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 113 (44.8 bits), Expect = 0.00026, P = 0.00026
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 89 IQSKERWAY---VKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEF 145
IQSK+ + KV M GV +GR + + GY L +LE +F + L Q R+++
Sbjct: 486 IQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQL---QTRNQW 542
Query: 146 SLLYKDGEENWRTVGDVPWTEFVESVKRLRI 176
+ + D + VGD PW EF + VK++ I
Sbjct: 543 KIAFTDSDGYEMLVGDDPWPEFCKMVKKILI 573
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 113 (44.8 bits), Expect = 0.00027, P = 0.00027
Identities = 31/91 (34%), Positives = 47/91 (51%)
Query: 89 IQSKE---RWAYVKVNMDGVMVGRKICILDHCGYSSLACQLEDMFVPRLGLRLFQARSEF 145
IQSK+ KV M GV +GR + + GY L +LE +F + L Q R+++
Sbjct: 502 IQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQL---QTRNQW 558
Query: 146 SLLYKDGEENWRTVGDVPWTEFVESVKRLRI 176
+ + D + VGD PW EF + VK++ I
Sbjct: 559 KIAFTDSDGYEMLVGDDPWPEFCKMVKKILI 589
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 113 (44.8 bits), Expect = 0.00037, P = 0.00037
Identities = 47/172 (27%), Positives = 73/172 (42%)
Query: 15 FHSVYNQAKQDDG----VIDLGLSLRTF--QPEAYHPSGHSLE-GYGDDLI---EWPETN 64
+ + YN Q G I+ G R F Q E P+ + + + D++ + E N
Sbjct: 577 YQNPYNAGNQSSGPPSRAINFGEETRKFDAQNEGGLPNNVTADLPFKIDMMGKQKGSELN 636
Query: 65 LQLKNSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLAC 124
+ + + F G V+ A QS + KV+ G VGR I + GY L
Sbjct: 637 MNASSGCKLF-GF-SLPVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLM 694
Query: 125 QLEDMFVPRLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRI 176
+LE +F GL L + +LY D E + VGD PW +F V ++ +
Sbjct: 695 ELERLFNME-GL-LRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHL 744
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 110 (43.8 bits), Expect = 0.00056, P = 0.00056
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 69 NSNRRFQGLVEEDVDEEAEGIQSKERWAYVKVNMDGVMVGRKICILDHCGYSSLACQLED 128
NS++ Q +ED+ EA KV+M GV + R + + GY+ L +LE+
Sbjct: 408 NSDQMIQPR-KEDITTEATTSCLLFGVDLTKVHMQGVAISRAVDLTAMHGYNQLIQKLEE 466
Query: 129 MFVPRLGLRLFQARSEFSLLYKDGEENWRTVGDVPWTEFVESVKRLRI 176
+F + LR R+++ +++ + E VGD PW EF KR+ I
Sbjct: 467 LFDLKDELR---TRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFI 511
>TAIR|locus:2174562 [details] [associations]
symbol:IAA33 "indole-3-acetic acid inducible 33"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB011482 EMBL:AY669804
IPI:IPI00546108 RefSeq:NP_200552.1 UniGene:At.55603 IntAct:Q9FKM7
EnsemblPlants:AT5G57420.1 GeneID:835848 KEGG:ath:AT5G57420
GeneFarm:3193 TAIR:At5g57420 eggNOG:NOG257684 HOGENOM:HOG000006227
InParanoid:Q9FKM7 OMA:CQRISLD PhylomeDB:Q9FKM7
ProtClustDB:CLSN2916817 ArrayExpress:Q9FKM7 Genevestigator:Q9FKM7
GermOnline:AT5G57420 Uniprot:Q9FKM7
Length = 171
Score = 100 (40.3 bits), Expect = 0.00084, P = 0.00084
Identities = 31/80 (38%), Positives = 38/80 (47%)
Query: 105 VMVGRKIC---ILD-HCGYSSLACQLEDMFVPRLG----LRLFQARSEFSLLYKDGEENW 156
V+ GR IC LD H Y SLA L MFV L L A + Y+D E +
Sbjct: 78 VLEGRSICQRISLDKHGSYQSLASALRQMFVDGADSTDDLDLSNAIPGHLIAYEDMENDL 137
Query: 157 RTVGDVPWTEFVESVKRLRI 176
GD+ W +FV KR+RI
Sbjct: 138 LLAGDLTWKDFVRVAKRIRI 157
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 179 179 0.00089 109 3 11 22 0.44 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 610 (65 KB)
Total size of DFA: 173 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.95u 0.17s 18.12t Elapsed: 00:00:01
Total cpu time: 17.95u 0.17s 18.12t Elapsed: 00:00:01
Start: Fri May 10 21:01:12 2013 End: Fri May 10 21:01:13 2013