BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040486
(460 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights
Into The Structural Basis Of A Multifunctional (Iso)
Flavonoid Glycosyltransferase
Length = 482
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 233/476 (48%), Gaps = 42/476 (8%)
Query: 17 LILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFN------SPNPSNYPHFT---FCS 67
+++ P P+QGHINP+ +LA +L+ +GF IT ++T +N S P + FT F S
Sbjct: 11 VVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFES 70
Query: 68 IEDSLSETEAS---TADLVALLSLLNVQCVVPFRNCLAKL--LSNVEEEEKEPIACLITD 122
I D L+ E + D+ L + + P+ L +L +NV P+ CL++D
Sbjct: 71 IPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVP-----PVTCLVSD 125
Query: 123 ATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPIRDSQSEAP------- 175
FT AE +L ++ ++S S L F ++G P +D
Sbjct: 126 CCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKV 185
Query: 176 --VPELPPLRVKDIP--VVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKF 231
+P L R+KDI + T + + E +++ + + N+ +LE +
Sbjct: 186 DWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINAL 245
Query: 232 HQDFPIPMFPIGPFHKXXXXXXXXXX---------XHDQTSISWLDKQTPKSVIYVSFGS 282
P ++PIGP D + WL+ + P SV+YV+FGS
Sbjct: 246 SSTIP-SIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGS 304
Query: 283 IAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAP 342
+ + LE AWGLAN K FLW++RP LV G I F + RG + W P
Sbjct: 305 TTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVI--FSSEFTNEIADRGLIASWCP 362
Query: 343 QQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLER 402
Q +VL HP+ GGF THCGWNST ESIC GVPM+C P F DQ + R++ + W++G+ ++
Sbjct: 363 QDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDT 422
Query: 403 KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458
++R E+ + I V+ +G++++ + M LK+K GG SY +L +I +L
Sbjct: 423 NVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478
>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VCH|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
pdb|2VG8|A Chain A, Characterization And Engineering Of The Bifunctional N-
And O-Glucosyltransferase Involved In Xenobiotic
Metabolism In Plants
Length = 480
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/466 (27%), Positives = 211/466 (45%), Gaps = 30/466 (6%)
Query: 9 IHQKKGRRLILFPLPLQGHINPMLQLAN-ILYSKGFSITIIHTNFNSPNPSNYPHFTFCS 67
+ + K + + P P GH+ P+++ A +++ G ++T + P S S
Sbjct: 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPP--SKAQRTVLDS 58
Query: 68 IEDSLSETEASTADLVALLSLLNVQCVVPFRNC-----LAKLLSNVEEEEKEPIACLITD 122
+ S+S DL L S ++ + L K+ + E + P A L+ D
Sbjct: 59 LPSSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTA-LVVD 117
Query: 123 ATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPIRDSQSEAPVPELPPL 182
VA + + + + F P L + R+ +P P+
Sbjct: 118 LFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFRELTEPLMLPGCVPV 177
Query: 183 RVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQ---DFPIPM 239
KD ++ ++ + T + K + G + N+ +LE ++ + D P P+
Sbjct: 178 AGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKP-PV 236
Query: 240 FPIGPFHKXXXXXXXXXXXHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLA 299
+P+GP + + WLD Q SV+YVSFGS + + E+A GLA
Sbjct: 237 YPVGPL--VNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLA 294
Query: 300 NSKVPFLWVVR-PGLVRGAEWIEP---------LPQGFLETLDGRGHMVK-WAPQQEVLA 348
+S+ FLWV+R P + + + + LP GFLE RG ++ WAPQ +VLA
Sbjct: 295 DSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLA 354
Query: 349 HPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERK----L 404
HP+TGGF THCGWNSTLES+ G+P+I P + +Q +NA +S+ + L +
Sbjct: 355 HPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLV 414
Query: 405 ERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSL 450
R EV R ++ +M EG+ +R ++ LKE L G+S ++L
Sbjct: 415 RREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKAL 460
>pdb|3HBF|A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp
pdb|3HBJ|A Chain A, Structure Of Ugt78g1 Complexed With Udp
Length = 454
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 206/457 (45%), Gaps = 36/457 (7%)
Query: 19 LFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNY-------PHFTFCSIEDS 71
+ P H P+L L + ++ +T + N + + P+ + ++ D
Sbjct: 18 VLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDG 77
Query: 72 LSETEASTADLVALLSLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAV 131
L + S+ + + L F++ + + ++ E + I CL+TDA ++F +
Sbjct: 78 LPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVA----ETGKNITCLVTDAFFWFGADL 133
Query: 132 AESLKLSRIVLRTNSVSSFLVFAAFPVLSQK-GYFPIRDSQSEAPVPELPPLRVKDIPV- 189
AE + + L T S L ++ +K G + D +S +P P L+ D+P
Sbjct: 134 AEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKEVHDVKSIDVLPGFPELKASDLPEG 193
Query: 190 ----VETCYRETLHRLVTE--ATNQMKVSSGCIWNSLQDLELASLTKFHQDFPIPMFPIG 243
++ + LH++ E N + ++S + L + EL S K + +G
Sbjct: 194 VIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKFKL-------LLNVG 246
Query: 244 PFHKXXXXXXXXXXXHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKV 303
PF+ + + WLD+ SV+Y+SFGS+ E +A L
Sbjct: 247 PFN---LTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGF 303
Query: 304 PFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNS 363
PF+W R + E LP+GFLE +G +V WAPQ E+L H + G F TH GWNS
Sbjct: 304 PFIWSFR------GDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNS 357
Query: 364 TLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERK-LERGEVERTIRRVMTEAEG 422
LE I GVPMI +P FGDQ +N V ++G+ ++ L + +++ + M+ +G
Sbjct: 358 VLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKG 417
Query: 423 QEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459
+R +I+ LKE + Q G+S +LI + S
Sbjct: 418 GIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454
>pdb|2C1X|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C1Z|A Chain A, Structure And Activity Of A Flavonoid 3-O
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
pdb|2C9Z|A Chain A, Structure And Activity Of A Flavonoid 3-0
Glucosyltransferase Reveals The Basis For Plant Natural
Product Modification
Length = 456
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 177/353 (50%), Gaps = 16/353 (4%)
Query: 111 EEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQK-GYFPIRD 169
E P++CL+ DA +F +A + ++ + T +S + +K G I+
Sbjct: 108 ETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQG 167
Query: 170 SQSEAP--VPELPPLRVKDIP--VVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLEL 225
+ E +P + +R +D+ +V R++ + ++ NS ++L+
Sbjct: 168 REDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELD- 226
Query: 226 ASLTKFHQDFPIPMFPIGPFHKXXXXXXXXXXXHDQTSISWLDKQTPKSVIYVSFGSIAA 285
SLT + IGPF+ + + WL ++ P SV+Y+SFG++
Sbjct: 227 DSLTNDLKSKLKTYLNIGPFN---LITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTT 283
Query: 286 INETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQE 345
E + ++ L S+VPF+W +R + LP+GFLE G G +V WAPQ E
Sbjct: 284 PPPAEVVALSEALEASRVPFIWSLR------DKARVHLPEGFLEKTRGYGMVVPWAPQAE 337
Query: 346 VLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKL- 404
VLAH A G F THCGWNS ES+ GVP+IC+P FGDQ +N R V DV ++G+ +E +
Sbjct: 338 VLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVF 397
Query: 405 ERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457
+ + +++++ +G+++R + L+E + + GSS ++ +L+ +
Sbjct: 398 TKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLV 450
>pdb|2ACV|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1
pdb|2ACV|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1
Length = 463
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 47/473 (9%)
Query: 13 KGRRLILFPLPLQGHINPMLQLANIL--YSKGFSITIIHTNF-NSPNPSNYPHFTFCSIE 69
K LI P P GH+ L+ A +L + K IT+ F P +Y S
Sbjct: 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP 67
Query: 70 D----SLSETEASTADLVA---LLSLLNVQCVVP-FRNCLAKLLSNVEEEEKEPIACLIT 121
L E E +L+ L ++ ++P + + +LSN + L+
Sbjct: 68 QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN-------KVVGLVL 120
Query: 122 DATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPIRDSQSEAPVPELPP 181
D V + + T++V + + + F DS + + +P
Sbjct: 121 DFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVF--DDSDRDHQLLNIPG 178
Query: 182 L--RVKDIPVVETCY-RETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKF--HQDFP 236
+ +V + + C+ ++ + + + + + G I N+ DLE +S+ H +
Sbjct: 179 ISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI 238
Query: 237 IPMFPIGPFH--KXXXXXXXXXXXHDQTSISWLDKQTPKSVIYVSFGSIA-AINETEFLE 293
P++ +GP K HD + WLD+Q KSV+++ FGS+ + ++ E
Sbjct: 239 PPIYAVGPLLDLKGQPNPKLDQAQHDLI-LKWLDEQPDKSVVFLCFGSMGVSFGPSQIRE 297
Query: 294 VAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLE--TLDGRGHMVKWAPQQEVLAHPA 351
+A GL +S V FLW + + P+GFLE L+G+G + WAPQ EVLAH A
Sbjct: 298 IALGLKHSGVRFLW-------SNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKA 350
Query: 352 TGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERG---- 407
GGF +HCGWNS LES+ GVP++ P + +Q +NA + W VGL L +G
Sbjct: 351 IGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVV 410
Query: 408 ---EVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457
E+E+ ++ +M + +V+ M KE ++ GGSS S+ LI I
Sbjct: 411 AAEEIEKGLKDLMDKDSIVHKKVQEM--KEMSRNAVVDGGSSLISVGKLIDDI 461
>pdb|2ACW|A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
pdb|2ACW|B Chain B, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed
With Udp-Glucose
Length = 465
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 128/473 (27%), Positives = 211/473 (44%), Gaps = 47/473 (9%)
Query: 13 KGRRLILFPLPLQGHINPMLQLANIL--YSKGFSITIIHTNF-NSPNPSNYPHFTFCSIE 69
K LI P P GH+ L+ A +L + K IT+ F P +Y S
Sbjct: 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP 67
Query: 70 D----SLSETEASTADLVA---LLSLLNVQCVVP-FRNCLAKLLSNVEEEEKEPIACLIT 121
L E E +L+ L ++ ++P + + +LSN + L+
Sbjct: 68 QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN-------KVVGLVL 120
Query: 122 DATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPIRDSQSEAPVPELPP 181
D V + + T++V + + + F DS + + +P
Sbjct: 121 DFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVF--DDSDRDHQLLNIPG 178
Query: 182 L--RVKDIPVVETCY-RETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKF--HQDFP 236
+ +V + + C+ ++ + + + + + G I N+ DLE +S+ H +
Sbjct: 179 ISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKI 238
Query: 237 IPMFPIGPFH--KXXXXXXXXXXXHDQTSISWLDKQTPKSVIYVSFGSIA-AINETEFLE 293
P++ +GP K HD + WLD+Q KSV+++ FGS+ + ++ E
Sbjct: 239 PPIYAVGPLLDLKGQPNPKLDQAQHDLI-LKWLDEQPDKSVVFLCFGSMGVSFGPSQIRE 297
Query: 294 VAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLE--TLDGRGHMVKWAPQQEVLAHPA 351
+A GL +S V FLW + + P+GFLE L+G+G + WAPQ EVLAH A
Sbjct: 298 IALGLKHSGVRFLW-------SNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKA 350
Query: 352 TGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERG---- 407
GGF +HCGWNS LES+ GVP++ P + +Q +NA + W VGL L +G
Sbjct: 351 IGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVV 410
Query: 408 ---EVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457
E+E+ ++ +M + +V+ M KE ++ GGSS S+ LI I
Sbjct: 411 AAEEIEKGLKDLMDKDSIVHKKVQEM--KEMSRNAVVDGGSSLISVGKLIDDI 461
>pdb|2O6L|A Chain A, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
pdb|2O6L|B Chain B, Crystal Structure Of The Udp-Glucuronic Acid Binding
Domain Of The Human Drug Metabolizing
Udp-Glucuronosyltransferase 2b7
Length = 170
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 317 AEWIEPLPQGFLETLDGRG--------HMVKWAPQQEVLAHPATGGFWTHCGWNSTLESI 368
A + +PQ L DG + KW PQ ++L HP T F TH G N E+I
Sbjct: 44 ASALAQIPQKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAI 103
Query: 369 CEGVPMICQPCFGDQMVN 386
G+P + P F DQ N
Sbjct: 104 YHGIPXVGIPLFADQPDN 121
>pdb|2IYA|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYA|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 424
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 339 KWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGL 398
+W PQ ++L + F TH G ST+E++ VPM+ P +Q +NA + V L
Sbjct: 311 QWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERI-----VEL 363
Query: 399 HLERKLERGEV--ERTIRRVMTEAEGQEIRVRIMILKEKL 436
L R + R +V E+ V+ A + R+ +++++
Sbjct: 364 GLGRHIPRDQVTAEKLREAVLAVASDPGVAERLAAVRQEI 403
>pdb|2IYF|A Chain A, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
pdb|2IYF|B Chain B, The Crystal Structure Of Macrolide Glycosyltransferases: A
Blueprint For Antibiotic Engineering
Length = 430
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 42/115 (36%), Gaps = 27/115 (23%)
Query: 340 WAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLH 399
W PQ +L F TH G + E + PMI P DQ NA + GL
Sbjct: 290 WVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQ-----GLG 342
Query: 400 LERKL------------------ERGEVERTIRRVMTE--AEGQEIRVRIMILKE 434
+ RKL + EV R +RR+ E EG R +I E
Sbjct: 343 VARKLATEEATADLLRETALALVDDPEVARRLRRIQAEMAQEGGTRRAADLIEAE 397
>pdb|1FLC|B Chain B, X-Ray Structure Of The Haemagglutinin-Esterase-Fusion
Glycoprotein Of Influenza C Virus
pdb|1FLC|D Chain D, X-Ray Structure Of The Haemagglutinin-Esterase-Fusion
Glycoprotein Of Influenza C Virus
pdb|1FLC|F Chain F, X-Ray Structure Of The Haemagglutinin-Esterase-Fusion
Glycoprotein Of Influenza C Virus
Length = 175
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 165 FPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQ-----MKVSSGC--IW 217
I +++SEA + EL +R + + +E+L L +E TN+ ++VS GC I
Sbjct: 82 LEIENARSEALLGELGIIRALLVGNISIGLQESLWELASEITNRAGDLAVEVSPGCWIID 141
Query: 218 NSLQDLELASLT-KFHQDFPIPMFP 241
N++ D + KF++ P+P P
Sbjct: 142 NNICDQSCQNFIFKFNETAPVPTIP 166
>pdb|4FZR|A Chain A, Crystal Structure Of Ssfs6, Streptomyces Sp. Sf2575
Glycosyltransferase
Length = 398
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 317 AEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMIC 376
A+ ++PLP+G L G+ + P +V+ H H G +TL + EGVP +
Sbjct: 276 AQTLQPLPEGVLAA--GQFPLSAIXPACDVVVH--------HGGHGTTLTCLSEGVPQVS 325
Query: 377 QPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTI 413
P + +AR + G +E E+ VE +
Sbjct: 326 VPVIAEVWDSARLLH---AAGAGVEVPWEQAGVESVL 359
>pdb|4G2T|A Chain A, Crystal Structure Of Streptomyces Sp. Sf2575
Glycosyltransferase Ssfs6, Complexed With Thymidine
Diphosphate
Length = 397
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 317 AEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMIC 376
A+ ++PLP+G L G+ + P +V+ H H G +TL + EGVP +
Sbjct: 275 AQTLQPLPEGVLAA--GQFPLSAIXPACDVVVH--------HGGHGTTLTCLSEGVPQVS 324
Query: 377 QPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTI 413
P + +AR + G +E E+ VE +
Sbjct: 325 VPVIAEVWDSARLLH---AAGAGVEVPWEQAGVESVL 358
>pdb|3IA7|A Chain A, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
pdb|3IA7|B Chain B, Crystal Structure Of Calg4, The Calicheamicin
Glycosyltransferase
Length = 402
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Query: 339 KWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMV-NARYVSDVWKVG 397
+W P VLAH TH + LE+ GVP++ P F + +A V ++
Sbjct: 287 QWIPFHSVLAH--ARACLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGS 344
Query: 398 LHLERKLERGEVERTIRRVMTEA 420
+ +LE + + R+ ++
Sbjct: 345 VLRPDQLEPASIREAVERLAADS 367
>pdb|3OTG|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp Bound Form
pdb|3OTH|A Chain A, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
pdb|3OTH|B Chain B, Crystal Structure Of Calg1, Calicheamicin
Glycostyltransferase, Tdp And Calicheamicin Alpha3i
Bound Form
Length = 412
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 17/123 (13%)
Query: 265 SWLD-KQTPKSVIYVSFGSIAAINETEFLEVAW-GLANSKVPFLWVVRPGL-VRGAEWIE 321
+WL + T + ++Y++ G+ + E L A GLA L P L V G
Sbjct: 233 AWLSSRDTARPLVYLTLGTSSG-GTVEVLRAAIDGLAGLDADVLVASGPSLDVSG----- 286
Query: 322 PLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFG 381
L + + W PQ +L H H G +TL ++ GVP + P G
Sbjct: 287 ------LGEVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAG 338
Query: 382 DQM 384
D
Sbjct: 339 DSF 341
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,126,672
Number of Sequences: 62578
Number of extensions: 514571
Number of successful extensions: 1054
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1022
Number of HSP's gapped (non-prelim): 21
length of query: 460
length of database: 14,973,337
effective HSP length: 102
effective length of query: 358
effective length of database: 8,590,381
effective search space: 3075356398
effective search space used: 3075356398
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)