Query 040486
Match_columns 460
No_of_seqs 132 out of 1240
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 14:15:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040486.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040486hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 1.9E-70 6.4E-75 537.3 31.4 435 11-459 10-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 9.2E-65 3.1E-69 507.4 34.4 440 12-459 6-479 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 1.7E-62 5.7E-67 489.4 40.4 440 11-459 3-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.9E-62 6.4E-67 485.9 31.4 434 12-459 5-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 3.5E-59 1.2E-63 463.7 37.1 424 13-458 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 8.8E-47 3E-51 373.0 28.4 398 11-458 9-421 (424)
7 4amg_A Snogd; transferase, pol 100.0 3.3E-46 1.1E-50 366.1 27.1 357 14-455 22-397 (400)
8 1iir_A Glycosyltransferase GTF 100.0 8.2E-44 2.8E-48 350.5 22.4 379 15-457 1-399 (415)
9 3rsc_A CALG2; TDP, enediyne, s 100.0 1.2E-42 4.1E-47 342.5 28.4 387 6-459 12-414 (415)
10 3ia7_A CALG4; glycosysltransfe 100.0 3E-41 1E-45 331.1 30.3 376 12-458 2-398 (402)
11 1rrv_A Glycosyltransferase GTF 100.0 9.2E-43 3.2E-47 343.2 18.6 374 15-453 1-395 (416)
12 2yjn_A ERYCIII, glycosyltransf 100.0 1.9E-41 6.3E-46 336.4 26.8 378 11-458 17-435 (441)
13 3h4t_A Glycosyltransferase GTF 100.0 2.2E-41 7.4E-46 331.7 20.7 365 15-458 1-382 (404)
14 2iyf_A OLED, oleandomycin glyc 100.0 5.2E-40 1.8E-44 325.2 25.3 381 12-457 5-398 (430)
15 2p6p_A Glycosyl transferase; X 100.0 3.2E-39 1.1E-43 314.7 26.5 352 15-457 1-378 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 5.5E-38 1.9E-42 307.4 24.3 353 12-457 18-396 (398)
17 4fzr_A SSFS6; structural genom 100.0 1.5E-38 5.2E-43 311.4 17.6 354 12-453 13-395 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 8.6E-36 2.9E-40 291.2 23.0 356 14-458 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 3.2E-34 1.1E-38 282.0 24.5 363 11-458 17-408 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 2.7E-29 9.1E-34 242.0 22.5 305 15-419 3-324 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 1.7E-27 5.9E-32 204.1 12.6 158 260-437 8-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 9.1E-21 3.1E-25 182.7 21.8 337 15-459 7-356 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 2.4E-15 8.2E-20 137.5 15.3 116 272-402 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 3.2E-16 1.1E-20 137.4 9.1 138 271-416 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.5 4.2E-11 1.4E-15 117.9 28.1 367 12-458 18-423 (438)
26 3okp_A GDP-mannose-dependent a 99.4 5.9E-12 2E-16 122.0 19.1 344 12-459 2-378 (394)
27 3fro_A GLGA glycogen synthase; 99.4 8.3E-11 2.9E-15 115.6 26.0 381 14-459 2-429 (439)
28 3ot5_A UDP-N-acetylglucosamine 99.4 5.4E-12 1.8E-16 122.5 13.7 160 272-457 223-392 (403)
29 2gek_A Phosphatidylinositol ma 99.4 1.9E-10 6.3E-15 111.9 24.8 113 332-459 262-382 (406)
30 1v4v_A UDP-N-acetylglucosamine 99.3 1.3E-11 4.6E-16 118.9 15.7 158 272-456 197-364 (376)
31 2jjm_A Glycosyl transferase, g 99.3 1E-09 3.5E-14 106.4 29.0 347 14-459 15-384 (394)
32 3dzc_A UDP-N-acetylglucosamine 99.3 2.5E-12 8.6E-17 124.7 9.4 134 272-427 229-372 (396)
33 2r60_A Glycosyl transferase, g 99.3 5.2E-10 1.8E-14 112.1 23.9 167 275-458 263-457 (499)
34 1vgv_A UDP-N-acetylglucosamine 99.3 2.1E-11 7.1E-16 117.9 12.9 129 272-419 204-342 (384)
35 2iw1_A Lipopolysaccharide core 99.3 1.5E-09 5.2E-14 104.1 25.3 135 273-429 195-344 (374)
36 2iuy_A Avigt4, glycosyltransfe 99.3 2.1E-10 7.3E-15 108.9 18.2 125 276-418 164-307 (342)
37 3beo_A UDP-N-acetylglucosamine 99.2 5.1E-10 1.7E-14 107.7 17.5 161 272-458 204-374 (375)
38 2x6q_A Trehalose-synthase TRET 99.1 2E-09 7E-14 105.1 16.7 111 333-459 293-413 (416)
39 4hwg_A UDP-N-acetylglucosamine 98.9 3.8E-09 1.3E-13 101.6 11.5 348 11-457 6-374 (385)
40 3s28_A Sucrose synthase 1; gly 98.9 3E-07 1E-11 95.9 23.3 112 333-458 640-767 (816)
41 3oy2_A Glycosyltransferase B73 98.8 2.8E-07 9.5E-12 89.7 18.9 110 335-459 256-389 (413)
42 2hy7_A Glucuronosyltransferase 98.7 5.9E-07 2E-11 87.2 18.5 72 334-419 266-352 (406)
43 2qzs_A Glycogen synthase; glyc 98.6 2.7E-06 9.3E-11 84.5 19.8 157 275-459 293-475 (485)
44 1rzu_A Glycogen synthase 1; gl 98.6 1.2E-06 4.1E-11 87.1 17.1 159 276-459 293-474 (485)
45 2f9f_A First mannosyl transfer 98.5 1.9E-07 6.4E-12 79.4 8.2 138 276-433 25-174 (177)
46 2vsy_A XCC0866; transferase, g 98.5 1.3E-05 4.3E-10 81.4 23.1 116 333-459 434-558 (568)
47 2xci_A KDO-transferase, 3-deox 98.2 0.00012 4.1E-09 70.0 20.7 96 335-437 262-364 (374)
48 2x0d_A WSAF; GT4 family, trans 98.0 0.00061 2.1E-08 65.9 20.4 83 334-428 296-385 (413)
49 4gyw_A UDP-N-acetylglucosamine 97.9 0.00022 7.4E-09 74.1 15.7 171 271-459 520-704 (723)
50 3qhp_A Type 1 capsular polysac 97.8 0.00011 3.6E-09 61.2 9.8 139 274-433 2-155 (166)
51 3tov_A Glycosyl transferase fa 97.7 0.00025 8.4E-09 67.0 11.4 106 12-141 6-115 (349)
52 2bfw_A GLGA glycogen synthase; 97.7 0.00047 1.6E-08 59.2 12.4 77 334-419 96-181 (200)
53 1psw_A ADP-heptose LPS heptosy 97.6 0.0014 4.7E-08 61.7 15.6 103 15-141 1-106 (348)
54 3rhz_A GTF3, nucleotide sugar 97.4 0.00044 1.5E-08 64.8 9.5 111 334-457 215-337 (339)
55 3q3e_A HMW1C-like glycosyltran 97.3 0.00097 3.3E-08 66.6 10.7 138 273-419 440-588 (631)
56 2gt1_A Lipopolysaccharide hept 96.2 0.0072 2.5E-07 56.2 6.5 49 15-63 1-51 (326)
57 3vue_A GBSS-I, granule-bound s 95.7 0.039 1.3E-06 55.1 9.9 163 276-459 329-510 (536)
58 3ty2_A 5'-nucleotidase SURE; s 94.9 0.096 3.3E-06 46.1 8.4 111 12-145 9-136 (261)
59 2phj_A 5'-nucleotidase SURE; S 94.8 0.38 1.3E-05 42.2 11.9 111 14-145 1-128 (251)
60 1j9j_A Stationary phase surviV 94.2 0.66 2.3E-05 40.6 12.0 110 15-144 1-128 (247)
61 2e6c_A 5'-nucleotidase SURE; S 93.6 0.99 3.4E-05 39.4 12.1 108 15-144 1-129 (244)
62 1l5x_A SurviVal protein E; str 93.3 0.69 2.4E-05 41.3 10.8 110 15-145 1-128 (280)
63 3vue_A GBSS-I, granule-bound s 92.7 0.074 2.5E-06 53.1 4.0 43 9-53 4-54 (536)
64 2wqk_A 5'-nucleotidase SURE; S 92.2 1.4 4.9E-05 38.7 11.2 111 14-145 1-128 (251)
65 2v4n_A Multifunctional protein 91.7 1.5 5E-05 38.6 10.6 107 15-144 2-126 (254)
66 3nb0_A Glycogen [starch] synth 87.6 2.2 7.4E-05 43.3 9.3 39 339-379 499-550 (725)
67 1uqt_A Alpha, alpha-trehalose- 85.2 4.1 0.00014 39.7 9.9 105 338-459 337-453 (482)
68 1kjn_A MTH0777; hypotethical p 84.5 1.4 4.9E-05 34.6 4.9 41 11-51 3-45 (157)
69 1xmp_A PURE, phosphoribosylami 81.9 19 0.00064 29.1 12.1 142 272-442 10-165 (170)
70 1o4v_A Phosphoribosylaminoimid 81.1 21 0.00073 29.2 13.1 142 272-442 12-165 (183)
71 3t5t_A Putative glycosyltransf 80.8 8.4 0.00029 37.6 10.0 109 334-458 353-471 (496)
72 3fgn_A Dethiobiotin synthetase 78.4 32 0.0011 30.0 12.2 38 12-49 23-62 (251)
73 4dzz_A Plasmid partitioning pr 78.0 9.9 0.00034 31.7 8.7 37 15-51 1-39 (206)
74 3qxc_A Dethiobiotin synthetase 77.8 29 0.001 30.1 11.7 37 13-49 19-57 (242)
75 1g5t_A COB(I)alamin adenosyltr 76.3 9.5 0.00033 31.9 7.8 98 13-125 27-130 (196)
76 1sbz_A Probable aromatic acid 74.7 3.9 0.00013 34.4 5.0 36 15-51 1-37 (197)
77 3zqu_A Probable aromatic acid 74.5 3.6 0.00012 34.9 4.7 37 14-51 4-40 (209)
78 3lp6_A Phosphoribosylaminoimid 73.6 35 0.0012 27.7 11.8 139 272-439 6-156 (174)
79 3lqk_A Dipicolinate synthase s 71.9 6.6 0.00023 33.1 5.8 45 13-57 6-50 (201)
80 1ccw_A Protein (glutamate muta 71.5 5.6 0.00019 31.2 4.9 39 13-51 2-40 (137)
81 3rg8_A Phosphoribosylaminoimid 70.8 39 0.0013 27.0 11.3 136 274-438 3-148 (159)
82 3qjg_A Epidermin biosynthesis 70.7 5.2 0.00018 32.9 4.7 39 15-54 6-44 (175)
83 2ejb_A Probable aromatic acid 70.7 6.1 0.00021 33.0 5.2 37 15-52 2-38 (189)
84 4b4o_A Epimerase family protei 69.2 4.9 0.00017 36.1 4.8 32 15-50 1-32 (298)
85 4gi5_A Quinone reductase; prot 68.6 8 0.00027 34.5 5.9 38 12-49 20-60 (280)
86 3pdi_B Nitrogenase MOFE cofact 67.7 43 0.0015 32.2 11.3 87 14-142 313-399 (458)
87 3qvl_A Putative hydantoin race 67.1 19 0.00067 31.3 8.0 37 15-51 2-39 (245)
88 3mcu_A Dipicolinate synthase, 66.1 6 0.0002 33.5 4.2 40 13-53 4-44 (207)
89 2gk4_A Conserved hypothetical 65.7 19 0.00063 31.1 7.4 26 25-52 28-53 (232)
90 3vot_A L-amino acid ligase, BL 65.6 44 0.0015 31.5 11.0 36 12-52 3-38 (425)
91 3mc3_A DSRE/DSRF-like family p 65.4 9.4 0.00032 29.7 5.1 39 13-51 14-55 (134)
92 1mvl_A PPC decarboxylase athal 65.3 7.8 0.00027 32.9 4.9 42 13-56 18-59 (209)
93 1u11_A PURE (N5-carboxyaminoim 63.9 59 0.002 26.6 12.0 141 273-442 21-175 (182)
94 2d1p_A TUSD, hypothetical UPF0 63.2 13 0.00046 29.1 5.6 44 9-52 7-54 (140)
95 4b4k_A N5-carboxyaminoimidazol 62.9 61 0.0021 26.4 11.7 139 273-440 22-174 (181)
96 1id1_A Putative potassium chan 61.7 6.7 0.00023 31.1 3.7 34 13-51 2-35 (153)
97 1g63_A Epidermin modifying enz 60.4 7.3 0.00025 32.2 3.7 40 15-55 3-42 (181)
98 2hy5_A Putative sulfurtransfer 59.2 14 0.00049 28.4 5.1 39 15-53 1-43 (130)
99 3l4e_A Uncharacterized peptida 58.9 20 0.00068 30.2 6.3 44 264-307 19-62 (206)
100 1p3y_1 MRSD protein; flavoprot 58.5 6.8 0.00023 32.8 3.2 39 13-52 7-45 (194)
101 2yxb_A Coenzyme B12-dependent 57.6 9.6 0.00033 30.8 3.9 39 13-51 17-55 (161)
102 3kkl_A Probable chaperone prot 57.5 17 0.00059 31.6 5.8 40 12-51 1-51 (244)
103 1qzu_A Hypothetical protein MD 56.9 10 0.00034 32.1 4.0 45 12-57 17-62 (206)
104 3gpi_A NAD-dependent epimerase 56.3 13 0.00043 33.0 4.9 48 12-68 1-48 (286)
105 3kuu_A Phosphoribosylaminoimid 55.3 82 0.0028 25.5 11.2 141 274-443 13-167 (174)
106 2vo1_A CTP synthase 1; pyrimid 55.0 13 0.00046 32.6 4.5 40 12-51 20-62 (295)
107 3n7t_A Macrophage binding prot 54.8 26 0.00088 30.5 6.5 38 14-51 9-57 (247)
108 1y80_A Predicted cobalamin bin 54.7 15 0.00051 31.0 4.9 39 13-51 87-125 (210)
109 3llv_A Exopolyphosphatase-rela 54.1 8 0.00027 30.1 2.9 34 13-51 5-38 (141)
110 3ors_A N5-carboxyaminoimidazol 54.0 84 0.0029 25.2 11.3 138 273-439 3-154 (163)
111 2i2x_B MTAC, methyltransferase 54.0 20 0.00068 31.5 5.7 40 12-51 121-160 (258)
112 3sbx_A Putative uncharacterize 53.1 15 0.00052 30.5 4.4 44 6-50 5-52 (189)
113 3dfz_A SIRC, precorrin-2 dehyd 53.0 1E+02 0.0034 26.2 9.8 151 264-438 24-185 (223)
114 3ghy_A Ketopantoate reductase 52.9 8.3 0.00028 35.4 3.2 34 13-51 2-35 (335)
115 2ywx_A Phosphoribosylaminoimid 52.5 87 0.003 24.9 11.8 130 276-439 2-144 (157)
116 3kjh_A CO dehydrogenase/acetyl 51.6 11 0.00038 32.5 3.7 38 15-52 1-38 (254)
117 3u7q_B Nitrogenase molybdenum- 51.6 1.4E+02 0.0048 29.2 11.8 33 14-51 364-396 (523)
118 3doj_A AT3G25530, dehydrogenas 51.4 12 0.00043 33.8 4.1 35 11-50 18-52 (310)
119 1jx7_A Hypothetical protein YC 50.9 18 0.00063 26.9 4.4 40 15-54 2-46 (117)
120 4dll_A 2-hydroxy-3-oxopropiona 50.2 18 0.00062 32.9 5.0 34 12-50 29-62 (320)
121 1e2b_A Enzyme IIB-cellobiose; 49.8 38 0.0013 24.9 5.8 40 12-51 1-40 (106)
122 1lss_A TRK system potassium up 49.6 13 0.00044 28.5 3.4 32 14-50 4-35 (140)
123 1qgu_B Protein (nitrogenase mo 49.4 99 0.0034 30.2 10.4 33 14-51 360-392 (519)
124 1qkk_A DCTD, C4-dicarboxylate 49.1 53 0.0018 25.3 7.2 63 370-437 74-136 (155)
125 1bg6_A N-(1-D-carboxylethyl)-L 48.4 13 0.00043 34.4 3.7 34 12-50 2-35 (359)
126 2ew2_A 2-dehydropantoate 2-red 48.4 12 0.00042 33.6 3.6 32 14-50 3-34 (316)
127 3la6_A Tyrosine-protein kinase 48.3 33 0.0011 30.6 6.3 39 14-52 91-131 (286)
128 2r8r_A Sensor protein; KDPD, P 48.0 31 0.0011 29.5 5.8 41 12-52 4-44 (228)
129 1yt5_A Inorganic polyphosphate 47.8 12 0.00041 32.9 3.2 53 349-419 41-96 (258)
130 1p9o_A Phosphopantothenoylcyst 47.7 15 0.00051 33.3 3.9 24 30-53 67-90 (313)
131 2vqe_B 30S ribosomal protein S 47.7 1.4E+02 0.0048 26.0 10.1 32 114-145 157-190 (256)
132 2h31_A Multifunctional protein 46.9 1.9E+02 0.0065 27.3 12.6 138 272-438 264-411 (425)
133 3ezx_A MMCP 1, monomethylamine 46.8 25 0.00086 29.9 5.0 40 12-51 90-129 (215)
134 4hb9_A Similarities with proba 46.6 13 0.00045 34.7 3.6 30 15-49 2-31 (412)
135 3zzm_A Bifunctional purine bio 46.4 6.6 0.00023 37.8 1.3 106 13-132 8-118 (523)
136 3dfu_A Uncharacterized protein 46.3 14 0.00047 31.9 3.3 34 12-50 4-37 (232)
137 2b8t_A Thymidine kinase; deoxy 46.0 1.2E+02 0.0042 25.6 9.3 39 14-52 11-50 (223)
138 3pdi_A Nitrogenase MOFE cofact 45.7 72 0.0025 30.9 8.7 33 14-51 332-364 (483)
139 3obb_A Probable 3-hydroxyisobu 45.4 18 0.00061 32.6 4.1 31 14-49 3-33 (300)
140 1f0y_A HCDH, L-3-hydroxyacyl-C 45.3 14 0.00048 33.2 3.4 33 13-50 14-46 (302)
141 2a5l_A Trp repressor binding p 45.2 28 0.00096 28.7 5.1 39 12-50 3-42 (200)
142 3eag_A UDP-N-acetylmuramate:L- 45.1 22 0.00075 32.4 4.7 34 13-50 3-36 (326)
143 1ehi_A LMDDL2, D-alanine:D-lac 45.0 19 0.00066 33.5 4.4 38 13-50 2-44 (377)
144 3h4t_A Glycosyltransferase GTF 44.9 1.2E+02 0.0041 28.2 10.1 89 15-142 221-310 (404)
145 2h78_A Hibadh, 3-hydroxyisobut 44.9 18 0.00062 32.4 4.1 33 13-50 2-34 (302)
146 4grd_A N5-CAIR mutase, phospho 44.8 1.2E+02 0.0042 24.5 10.8 140 272-440 11-164 (173)
147 4eg0_A D-alanine--D-alanine li 44.8 39 0.0013 30.4 6.4 38 14-51 13-54 (317)
148 1mio_A Nitrogenase molybdenum 44.8 1.2E+02 0.004 29.8 10.0 35 14-53 335-369 (533)
149 2bw0_A 10-FTHFDH, 10-formyltet 44.6 36 0.0012 31.1 6.0 35 12-51 20-54 (329)
150 2r85_A PURP protein PF1517; AT 44.5 20 0.00067 32.6 4.3 32 14-51 2-33 (334)
151 2g1u_A Hypothetical protein TM 44.4 25 0.00084 27.8 4.4 34 13-51 18-51 (155)
152 3hn2_A 2-dehydropantoate 2-red 43.4 19 0.00066 32.5 4.0 46 15-67 3-48 (312)
153 1rw7_A YDR533CP; alpha-beta sa 43.4 45 0.0015 28.8 6.2 38 14-51 3-51 (243)
154 1gsa_A Glutathione synthetase; 43.2 20 0.0007 32.0 4.2 37 15-51 2-41 (316)
155 1hdo_A Biliverdin IX beta redu 42.7 32 0.0011 28.3 5.1 33 15-51 4-36 (206)
156 1ks9_A KPA reductase;, 2-dehyd 42.6 22 0.00074 31.5 4.2 32 15-51 1-32 (291)
157 3i83_A 2-dehydropantoate 2-red 42.0 20 0.00068 32.6 3.9 32 15-51 3-34 (320)
158 3l4b_C TRKA K+ channel protien 41.9 11 0.00038 31.9 2.1 32 15-51 1-32 (218)
159 2p90_A Hypothetical protein CG 41.5 2E+02 0.0068 25.9 11.6 148 272-435 101-265 (319)
160 2xj4_A MIPZ; replication, cell 40.9 30 0.001 30.7 4.9 40 13-52 2-43 (286)
161 3ftp_A 3-oxoacyl-[acyl-carrier 40.8 41 0.0014 29.5 5.7 43 5-50 18-60 (270)
162 3ew7_A LMO0794 protein; Q8Y8U8 40.6 22 0.00074 29.8 3.7 33 15-51 1-33 (221)
163 3hwr_A 2-dehydropantoate 2-red 40.3 20 0.00068 32.5 3.6 31 13-48 18-48 (318)
164 3h2s_A Putative NADH-flavin re 40.2 22 0.00076 29.8 3.7 33 15-51 1-33 (224)
165 1mio_B Nitrogenase molybdenum 40.1 1.1E+02 0.0039 29.2 9.1 26 114-142 384-409 (458)
166 3qsg_A NAD-binding phosphogluc 40.0 16 0.00054 33.1 2.9 34 12-50 22-56 (312)
167 4huj_A Uncharacterized protein 40.0 13 0.00043 31.7 2.1 35 11-50 20-54 (220)
168 3fwz_A Inner membrane protein 40.0 23 0.00079 27.4 3.5 33 14-51 7-39 (140)
169 3rfo_A Methionyl-tRNA formyltr 39.9 38 0.0013 30.7 5.3 36 12-52 2-37 (317)
170 2raf_A Putative dinucleotide-b 39.7 24 0.00082 29.7 3.8 33 13-50 18-50 (209)
171 2bru_C NAD(P) transhydrogenase 39.7 34 0.0012 27.5 4.3 38 14-51 30-70 (186)
172 3q0i_A Methionyl-tRNA formyltr 39.6 45 0.0016 30.2 5.8 36 12-52 5-40 (318)
173 3qua_A Putative uncharacterize 39.5 50 0.0017 27.6 5.6 45 5-50 13-61 (199)
174 3l77_A Short-chain alcohol deh 39.4 32 0.0011 29.3 4.6 33 15-50 2-34 (235)
175 3e8x_A Putative NAD-dependent 39.2 35 0.0012 29.0 4.9 36 12-51 19-54 (236)
176 2zyd_A 6-phosphogluconate dehy 39.2 15 0.00053 35.6 2.8 37 9-50 10-46 (480)
177 2qs7_A Uncharacterized protein 39.2 41 0.0014 26.3 4.9 36 16-51 9-45 (144)
178 1dhr_A Dihydropteridine reduct 38.9 31 0.0011 29.5 4.6 36 13-51 5-40 (241)
179 2c5m_A CTP synthase; cytidine 38.8 22 0.00074 31.0 3.2 39 13-51 21-62 (294)
180 2fb6_A Conserved hypothetical 38.6 34 0.0012 25.8 4.1 37 15-51 8-48 (117)
181 1u7z_A Coenzyme A biosynthesis 38.1 32 0.0011 29.4 4.3 23 30-52 36-58 (226)
182 3g0o_A 3-hydroxyisobutyrate de 38.0 19 0.00065 32.4 3.1 33 13-50 6-38 (303)
183 3lyu_A Putative hydrogenase; t 37.8 56 0.0019 25.4 5.5 35 14-51 18-52 (142)
184 2lnd_A De novo designed protei 37.8 37 0.0013 23.2 3.6 49 369-418 49-100 (112)
185 3oow_A Phosphoribosylaminoimid 37.8 1.6E+02 0.0054 23.7 12.1 141 274-443 6-160 (166)
186 3guy_A Short-chain dehydrogena 37.5 26 0.0009 29.7 3.8 34 15-51 1-34 (230)
187 3k96_A Glycerol-3-phosphate de 37.4 22 0.00075 32.9 3.4 34 13-51 28-61 (356)
188 1e4e_A Vancomycin/teicoplanin 37.4 21 0.00071 32.8 3.3 38 13-50 2-43 (343)
189 1z82_A Glycerol-3-phosphate de 37.2 24 0.00083 32.2 3.7 32 14-50 14-45 (335)
190 3f6r_A Flavodoxin; FMN binding 37.1 37 0.0013 26.4 4.4 38 14-51 1-39 (148)
191 2l2q_A PTS system, cellobiose- 36.9 54 0.0018 24.2 5.0 37 14-50 4-40 (109)
192 3auf_A Glycinamide ribonucleot 36.8 55 0.0019 28.0 5.6 108 9-145 17-132 (229)
193 3ucx_A Short chain dehydrogena 36.7 46 0.0016 29.0 5.3 34 14-50 10-43 (264)
194 2pn1_A Carbamoylphosphate synt 36.7 44 0.0015 30.2 5.4 34 12-51 2-37 (331)
195 3czc_A RMPB; alpha/beta sandwi 36.7 37 0.0013 25.1 4.0 40 9-48 13-54 (110)
196 3s40_A Diacylglycerol kinase; 36.4 44 0.0015 30.0 5.2 67 288-379 25-97 (304)
197 2i2c_A Probable inorganic poly 36.1 13 0.00045 33.0 1.6 28 350-379 36-69 (272)
198 1fjh_A 3alpha-hydroxysteroid d 35.9 42 0.0014 28.9 5.0 33 15-50 1-33 (257)
199 2d1p_B TUSC, hypothetical UPF0 35.8 52 0.0018 24.7 4.8 37 16-52 3-42 (119)
200 3ic5_A Putative saccharopine d 35.8 31 0.0011 25.2 3.5 33 14-51 5-38 (118)
201 3qrx_B Melittin; calcium-bindi 35.8 12 0.0004 19.1 0.6 17 360-376 1-17 (26)
202 1eiw_A Hypothetical protein MT 35.6 40 0.0014 25.1 4.0 65 347-418 36-109 (111)
203 3ius_A Uncharacterized conserv 35.3 35 0.0012 30.0 4.4 33 14-51 5-37 (286)
204 3trh_A Phosphoribosylaminoimid 35.2 1.8E+02 0.006 23.5 11.3 137 273-438 6-156 (169)
205 1psw_A ADP-heptose LPS heptosy 35.2 67 0.0023 29.1 6.5 38 14-51 180-222 (348)
206 2dpo_A L-gulonate 3-dehydrogen 35.1 25 0.00085 32.0 3.3 34 12-50 4-37 (319)
207 3ego_A Probable 2-dehydropanto 35.0 24 0.00081 31.8 3.2 32 14-51 2-33 (307)
208 2iz6_A Molybdenum cofactor car 34.9 43 0.0015 27.3 4.4 76 337-418 93-173 (176)
209 1iow_A DD-ligase, DDLB, D-ALA\ 34.9 51 0.0018 29.2 5.5 38 14-51 2-43 (306)
210 3dqp_A Oxidoreductase YLBE; al 34.8 26 0.00088 29.4 3.2 33 15-51 1-33 (219)
211 2jk1_A HUPR, hydrogenase trans 34.5 97 0.0033 23.1 6.5 49 370-419 71-119 (139)
212 3pdu_A 3-hydroxyisobutyrate de 34.4 26 0.00089 31.1 3.3 32 14-50 1-32 (287)
213 2r6j_A Eugenol synthase 1; phe 34.2 32 0.0011 30.8 4.0 32 16-51 13-44 (318)
214 2qyt_A 2-dehydropantoate 2-red 34.2 15 0.00052 33.1 1.8 32 14-50 8-45 (317)
215 3l7i_A Teichoic acid biosynthe 34.2 33 0.0011 35.2 4.5 108 339-457 605-718 (729)
216 2vns_A Metalloreductase steap3 33.9 26 0.00089 29.6 3.1 33 13-50 27-59 (215)
217 3g79_A NDP-N-acetyl-D-galactos 33.8 44 0.0015 32.3 5.0 36 12-52 16-53 (478)
218 4e21_A 6-phosphogluconate dehy 33.8 24 0.00083 32.7 3.1 34 12-50 20-53 (358)
219 1u0t_A Inorganic polyphosphate 33.7 16 0.00056 33.0 1.8 32 346-379 72-107 (307)
220 2q5c_A NTRC family transcripti 33.7 52 0.0018 27.3 4.9 42 95-146 129-170 (196)
221 3rp8_A Flavoprotein monooxygen 33.6 29 0.001 32.5 3.7 41 6-51 15-55 (407)
222 1yb4_A Tartronic semialdehyde 33.4 31 0.0011 30.6 3.7 31 14-49 3-33 (295)
223 2i87_A D-alanine-D-alanine lig 33.4 21 0.00072 33.0 2.6 40 12-51 1-44 (364)
224 2w36_A Endonuclease V; hypoxan 33.4 71 0.0024 27.2 5.6 32 114-145 102-140 (225)
225 2an1_A Putative kinase; struct 33.3 18 0.00063 32.3 2.1 33 345-379 59-95 (292)
226 4e3z_A Putative oxidoreductase 33.2 46 0.0016 29.1 4.8 36 12-50 23-58 (272)
227 3tqq_A Methionyl-tRNA formyltr 33.1 43 0.0015 30.3 4.5 34 14-52 2-35 (314)
228 1txg_A Glycerol-3-phosphate de 33.1 24 0.00083 32.0 3.0 31 15-50 1-31 (335)
229 3sju_A Keto reductase; short-c 32.8 42 0.0014 29.6 4.4 36 12-50 21-56 (279)
230 2bon_A Lipid kinase; DAG kinas 32.7 72 0.0025 29.0 6.1 81 272-379 30-118 (332)
231 3s2u_A UDP-N-acetylglucosamine 32.6 82 0.0028 29.0 6.6 26 349-376 92-120 (365)
232 4g65_A TRK system potassium up 32.5 13 0.00045 35.9 1.1 33 14-51 3-35 (461)
233 1zmt_A Haloalcohol dehalogenas 32.2 39 0.0013 29.2 4.1 33 15-50 1-33 (254)
234 3tov_A Glycosyl transferase fa 32.1 1.2E+02 0.004 27.7 7.5 98 14-145 185-289 (349)
235 3pef_A 6-phosphogluconate dehy 32.1 34 0.0012 30.3 3.7 31 15-50 2-32 (287)
236 2zki_A 199AA long hypothetical 32.0 47 0.0016 27.3 4.4 37 13-50 3-40 (199)
237 1jay_A Coenzyme F420H2:NADP+ o 32.0 35 0.0012 28.4 3.6 31 15-50 1-32 (212)
238 4e12_A Diketoreductase; oxidor 31.8 38 0.0013 30.0 4.0 33 13-50 3-35 (283)
239 3dhn_A NAD-dependent epimerase 31.7 36 0.0012 28.5 3.7 34 14-51 4-37 (227)
240 3cky_A 2-hydroxymethyl glutara 31.7 49 0.0017 29.4 4.8 33 13-50 3-35 (301)
241 1pno_A NAD(P) transhydrogenase 31.7 50 0.0017 26.5 4.0 39 13-51 22-63 (180)
242 2qv7_A Diacylglycerol kinase D 31.5 50 0.0017 30.1 4.8 68 288-379 41-114 (337)
243 3gvc_A Oxidoreductase, probabl 31.5 58 0.002 28.6 5.1 33 15-50 29-61 (277)
244 2hmt_A YUAA protein; RCK, KTN, 31.5 29 0.00098 26.6 2.8 33 14-51 6-38 (144)
245 4h3k_B RNA polymerase II subun 31.5 2.3E+02 0.0078 23.6 9.9 40 13-55 24-63 (214)
246 1qyd_A Pinoresinol-lariciresin 31.4 44 0.0015 29.7 4.4 34 14-51 4-37 (313)
247 3e5n_A D-alanine-D-alanine lig 31.4 29 0.001 32.5 3.3 42 10-51 18-63 (386)
248 3afo_A NADH kinase POS5; alpha 31.4 28 0.00097 32.6 3.1 35 343-379 108-147 (388)
249 4ezb_A Uncharacterized conserv 31.4 33 0.0011 31.0 3.5 32 14-50 24-56 (317)
250 3dtt_A NADP oxidoreductase; st 31.2 39 0.0014 29.1 3.9 35 12-51 17-51 (245)
251 1mv8_A GMD, GDP-mannose 6-dehy 31.1 45 0.0016 31.7 4.6 31 15-50 1-31 (436)
252 1d4o_A NADP(H) transhydrogenas 31.0 52 0.0018 26.5 4.0 38 14-51 22-62 (184)
253 3lrx_A Putative hydrogenase; a 30.9 42 0.0014 26.7 3.7 38 13-53 22-59 (158)
254 3qha_A Putative oxidoreductase 30.5 29 0.00098 31.0 2.9 32 14-50 15-46 (296)
255 1fmt_A Methionyl-tRNA FMet for 30.4 49 0.0017 29.9 4.4 34 13-51 2-35 (314)
256 3q9l_A Septum site-determining 30.3 54 0.0019 28.2 4.7 38 15-52 2-41 (260)
257 3tzq_B Short-chain type dehydr 30.2 60 0.0021 28.3 5.0 35 14-51 10-44 (271)
258 4b79_A PA4098, probable short- 30.2 1.4E+02 0.0048 25.7 7.2 35 14-51 10-44 (242)
259 3i4f_A 3-oxoacyl-[acyl-carrier 29.9 67 0.0023 27.7 5.2 34 14-50 6-39 (264)
260 4g6h_A Rotenone-insensitive NA 29.9 32 0.0011 33.5 3.4 34 13-51 41-74 (502)
261 2gf2_A Hibadh, 3-hydroxyisobut 29.8 34 0.0012 30.4 3.3 31 15-50 1-31 (296)
262 3g17_A Similar to 2-dehydropan 29.8 15 0.00052 32.8 0.9 32 15-51 3-34 (294)
263 2iz1_A 6-phosphogluconate dehy 29.7 30 0.001 33.4 3.1 34 12-50 3-36 (474)
264 3r6d_A NAD-dependent epimerase 29.7 63 0.0022 26.9 4.9 35 14-51 4-39 (221)
265 2hy5_B Intracellular sulfur ox 29.7 81 0.0028 24.4 5.0 37 16-52 7-46 (136)
266 3end_A Light-independent proto 29.6 59 0.002 29.0 4.9 37 15-51 42-78 (307)
267 3t7c_A Carveol dehydrogenase; 29.5 66 0.0022 28.6 5.2 35 14-51 27-61 (299)
268 3of5_A Dethiobiotin synthetase 29.3 69 0.0024 27.3 5.1 35 14-48 3-39 (228)
269 1rpn_A GDP-mannose 4,6-dehydra 29.3 56 0.0019 29.4 4.8 36 12-51 12-47 (335)
270 3c1o_A Eugenol synthase; pheny 29.2 53 0.0018 29.4 4.6 34 14-51 4-37 (321)
271 3k31_A Enoyl-(acyl-carrier-pro 29.2 80 0.0027 28.0 5.7 46 3-50 16-64 (296)
272 2vrn_A Protease I, DR1199; cys 29.1 1.2E+02 0.0042 24.5 6.5 39 12-51 7-45 (190)
273 3dii_A Short-chain dehydrogena 29.0 56 0.0019 28.0 4.5 34 15-51 2-35 (247)
274 3nbm_A PTS system, lactose-spe 28.9 56 0.0019 24.2 3.8 39 12-50 4-42 (108)
275 2y0c_A BCEC, UDP-glucose dehyd 28.9 40 0.0014 32.6 3.8 35 12-51 6-40 (478)
276 2x4g_A Nucleoside-diphosphate- 28.9 44 0.0015 30.2 4.0 35 13-51 12-46 (342)
277 1i36_A Conserved hypothetical 28.8 30 0.001 30.1 2.7 29 15-48 1-29 (264)
278 1g3q_A MIND ATPase, cell divis 28.7 64 0.0022 27.2 4.8 38 15-52 2-41 (237)
279 1cp2_A CP2, nitrogenase iron p 28.7 57 0.0019 28.3 4.6 36 16-51 3-38 (269)
280 3orf_A Dihydropteridine reduct 28.7 58 0.002 28.0 4.5 35 14-51 21-55 (251)
281 2dkn_A 3-alpha-hydroxysteroid 28.6 64 0.0022 27.5 4.9 33 15-50 1-33 (255)
282 4gbj_A 6-phosphogluconate dehy 28.6 46 0.0016 29.8 3.9 30 15-49 6-35 (297)
283 2c5a_A GDP-mannose-3', 5'-epim 28.5 1.5E+02 0.005 27.2 7.7 35 13-51 28-62 (379)
284 2fsv_C NAD(P) transhydrogenase 28.4 59 0.002 26.8 4.0 38 14-51 46-86 (203)
285 3l6d_A Putative oxidoreductase 28.2 31 0.0011 31.0 2.7 33 13-50 8-40 (306)
286 3svt_A Short-chain type dehydr 28.2 65 0.0022 28.2 4.9 34 14-50 10-43 (281)
287 2q62_A ARSH; alpha/beta, flavo 27.8 81 0.0028 27.3 5.2 40 11-50 31-73 (247)
288 1djl_A Transhydrogenase DIII; 27.8 61 0.0021 26.8 4.0 38 14-51 45-85 (207)
289 2a3d_A Protein (de novo three- 27.7 60 0.0021 20.4 3.1 31 423-457 5-35 (73)
290 2gas_A Isoflavone reductase; N 27.7 48 0.0016 29.4 3.9 34 14-51 2-35 (307)
291 4h15_A Short chain alcohol deh 27.6 65 0.0022 28.1 4.7 34 14-50 10-43 (261)
292 3f67_A Putative dienelactone h 27.6 84 0.0029 26.0 5.4 37 14-50 31-67 (241)
293 2lpm_A Two-component response 27.5 37 0.0013 25.8 2.6 30 114-143 52-86 (123)
294 2xdo_A TETX2 protein; tetracyc 27.5 46 0.0016 31.0 3.9 35 12-51 24-58 (398)
295 3p19_A BFPVVD8, putative blue 27.4 58 0.002 28.4 4.4 35 14-51 15-49 (266)
296 3i12_A D-alanine-D-alanine lig 27.4 38 0.0013 31.3 3.3 40 12-51 1-44 (364)
297 4e5s_A MCCFLIKE protein (BA_56 27.3 1.2E+02 0.0042 27.5 6.6 72 287-379 63-136 (331)
298 3uve_A Carveol dehydrogenase ( 27.3 74 0.0025 27.9 5.1 34 14-50 10-43 (286)
299 4dim_A Phosphoribosylglycinami 27.1 58 0.002 30.4 4.5 35 12-51 5-39 (403)
300 3l18_A Intracellular protease 26.9 1.4E+02 0.0048 23.6 6.3 37 14-51 2-38 (168)
301 3tsc_A Putative oxidoreductase 26.9 74 0.0025 27.8 5.0 34 14-50 10-43 (277)
302 3kcn_A Adenylate cyclase homol 26.8 1.4E+02 0.0047 22.7 6.2 48 370-419 75-123 (151)
303 2f1k_A Prephenate dehydrogenas 26.7 50 0.0017 28.9 3.9 31 15-50 1-31 (279)
304 3f2v_A General stress protein 26.7 42 0.0014 27.8 3.1 36 14-49 1-37 (192)
305 3ppi_A 3-hydroxyacyl-COA dehyd 26.4 80 0.0027 27.6 5.2 34 14-50 29-62 (281)
306 1ydg_A Trp repressor binding p 26.1 91 0.0031 25.8 5.2 38 13-50 5-43 (211)
307 3gg2_A Sugar dehydrogenase, UD 26.1 45 0.0015 31.9 3.6 32 15-51 3-34 (450)
308 4hn9_A Iron complex transport 26.1 85 0.0029 28.4 5.4 38 101-145 109-146 (335)
309 3c24_A Putative oxidoreductase 26.1 48 0.0016 29.3 3.6 32 14-50 11-43 (286)
310 3b6i_A Flavoprotein WRBA; flav 26.1 82 0.0028 25.7 4.9 37 14-50 1-39 (198)
311 2rjn_A Response regulator rece 26.1 30 0.001 26.8 2.0 62 370-436 78-140 (154)
312 2bi7_A UDP-galactopyranose mut 25.9 81 0.0028 29.3 5.3 34 13-51 2-35 (384)
313 3se7_A VANA; alpha-beta struct 25.8 41 0.0014 30.8 3.2 39 13-51 2-44 (346)
314 3l6e_A Oxidoreductase, short-c 25.8 70 0.0024 27.2 4.5 33 15-50 3-35 (235)
315 1kyq_A Met8P, siroheme biosynt 25.7 3.4E+02 0.012 23.8 9.1 172 263-456 5-230 (274)
316 4gwg_A 6-phosphogluconate dehy 25.6 39 0.0013 32.8 3.0 34 12-50 2-35 (484)
317 3md9_A Hemin-binding periplasm 25.5 70 0.0024 27.5 4.5 36 101-143 52-89 (255)
318 4dgk_A Phytoene dehydrogenase; 25.5 31 0.0011 33.4 2.3 32 14-50 1-32 (501)
319 2rhc_B Actinorhodin polyketide 25.5 1E+02 0.0035 26.8 5.7 32 16-50 23-54 (277)
320 3nva_A CTP synthase; rossman f 25.4 75 0.0026 31.0 4.9 39 14-52 2-43 (535)
321 2ahr_A Putative pyrroline carb 25.2 46 0.0016 28.8 3.2 33 13-50 2-34 (259)
322 2pzm_A Putative nucleotide sug 25.2 58 0.002 29.3 4.1 34 13-50 19-52 (330)
323 3r5x_A D-alanine--D-alanine li 25.2 31 0.0011 30.8 2.1 38 14-51 3-44 (307)
324 3t4x_A Oxidoreductase, short c 25.0 1E+02 0.0034 26.7 5.5 33 15-50 10-42 (267)
325 3h7a_A Short chain dehydrogena 25.0 81 0.0028 27.1 4.8 33 15-50 7-39 (252)
326 3ot1_A 4-methyl-5(B-hydroxyeth 24.9 1.3E+02 0.0045 24.9 6.0 37 14-51 9-45 (208)
327 3v2h_A D-beta-hydroxybutyrate 24.9 70 0.0024 28.1 4.4 33 15-50 25-57 (281)
328 1js1_X Transcarbamylase; alpha 24.9 81 0.0028 28.6 4.8 38 15-52 169-206 (324)
329 2rcy_A Pyrroline carboxylate r 24.9 31 0.0011 30.0 2.1 34 12-50 2-39 (262)
330 3ax6_A Phosphoribosylaminoimid 24.8 1.2E+02 0.004 28.0 6.2 33 15-52 2-34 (380)
331 2pk3_A GDP-6-deoxy-D-LYXO-4-he 24.8 61 0.0021 28.8 4.1 36 12-51 10-45 (321)
332 2afh_E Nitrogenase iron protei 24.8 79 0.0027 27.8 4.8 36 16-51 4-39 (289)
333 3hly_A Flavodoxin-like domain; 24.8 93 0.0032 24.6 4.8 36 15-50 1-37 (161)
334 1evy_A Glycerol-3-phosphate de 24.7 37 0.0013 31.3 2.7 30 16-50 17-46 (366)
335 3c85_A Putative glutathione-re 24.7 46 0.0016 27.0 3.0 34 13-51 38-72 (183)
336 3o26_A Salutaridine reductase; 24.7 75 0.0026 28.1 4.7 35 14-51 11-45 (311)
337 3nrb_A Formyltetrahydrofolate 24.7 3.6E+02 0.012 23.8 9.1 109 12-145 86-196 (287)
338 4id9_A Short-chain dehydrogena 24.6 58 0.002 29.4 4.0 35 13-51 18-52 (347)
339 2ywr_A Phosphoribosylglycinami 24.6 95 0.0033 26.2 5.0 35 14-51 1-37 (216)
340 3bfv_A CAPA1, CAPB2, membrane 24.6 79 0.0027 27.7 4.7 40 13-52 80-121 (271)
341 3osu_A 3-oxoacyl-[acyl-carrier 24.5 92 0.0031 26.6 5.1 33 15-50 4-36 (246)
342 1tvm_A PTS system, galactitol- 24.5 2.1E+02 0.0072 21.0 7.8 38 13-50 20-58 (113)
343 2o6l_A UDP-glucuronosyltransfe 24.5 2E+02 0.0068 22.4 6.9 90 15-143 21-113 (170)
344 1o4v_A Phosphoribosylaminoimid 24.4 2.9E+02 0.0099 22.5 9.4 118 286-437 52-171 (183)
345 3d3j_A Enhancer of mRNA-decapp 24.4 58 0.002 29.3 3.8 34 15-51 133-168 (306)
346 1zi8_A Carboxymethylenebutenol 24.4 1.2E+02 0.004 25.0 5.7 37 14-50 27-63 (236)
347 2x5n_A SPRPN10, 26S proteasome 24.2 1E+02 0.0036 25.3 5.1 37 15-51 107-144 (192)
348 2z04_A Phosphoribosylaminoimid 24.1 87 0.003 28.7 5.1 33 14-51 1-33 (365)
349 3imf_A Short chain dehydrogena 23.9 87 0.003 27.0 4.8 33 15-50 6-38 (257)
350 3bul_A Methionine synthase; tr 23.8 79 0.0027 31.4 4.8 39 13-51 97-135 (579)
351 3enk_A UDP-glucose 4-epimerase 23.7 72 0.0025 28.7 4.4 33 14-50 5-37 (341)
352 2ab0_A YAJL; DJ-1/THIJ superfa 23.7 1.4E+02 0.0049 24.6 6.0 37 15-52 3-39 (205)
353 4ehi_A Bifunctional purine bio 23.7 19 0.00065 34.8 0.4 56 14-75 23-80 (534)
354 3d3k_A Enhancer of mRNA-decapp 23.6 63 0.0022 28.2 3.8 33 15-50 86-120 (259)
355 1ooe_A Dihydropteridine reduct 23.6 83 0.0029 26.6 4.6 33 16-51 4-36 (236)
356 4e5v_A Putative THUA-like prot 23.6 92 0.0032 27.6 4.9 39 12-51 2-43 (281)
357 1jzt_A Hypothetical 27.5 kDa p 23.5 59 0.002 28.2 3.5 33 15-50 59-93 (246)
358 3pfn_A NAD kinase; structural 23.4 30 0.001 32.1 1.7 32 344-377 103-138 (365)
359 3slg_A PBGP3 protein; structur 23.4 62 0.0021 29.6 4.0 38 10-51 20-58 (372)
360 1vhq_A Enhancing lycopene bios 23.4 1.5E+02 0.0051 25.1 6.2 38 14-52 6-48 (232)
361 3i6i_A Putative leucoanthocyan 23.4 82 0.0028 28.5 4.8 36 12-51 8-43 (346)
362 2pju_A Propionate catabolism o 23.3 71 0.0024 27.2 3.9 68 349-419 63-153 (225)
363 1geg_A Acetoin reductase; SDR 23.2 83 0.0028 27.0 4.5 32 16-50 3-34 (256)
364 3da8_A Probable 5'-phosphoribo 23.2 2E+02 0.0067 24.2 6.6 118 289-433 76-195 (215)
365 2etv_A Iron(III) ABC transport 23.1 58 0.002 29.8 3.6 29 115-143 96-125 (346)
366 1vpd_A Tartronate semialdehyde 23.1 83 0.0028 27.8 4.6 31 15-50 6-36 (299)
367 4etm_A LMPTP, low molecular we 22.9 96 0.0033 25.1 4.5 44 6-49 10-56 (173)
368 3pfb_A Cinnamoyl esterase; alp 22.9 1.2E+02 0.0042 25.5 5.7 36 15-50 46-83 (270)
369 3oid_A Enoyl-[acyl-carrier-pro 22.8 1E+02 0.0035 26.6 5.0 34 14-50 3-36 (258)
370 3f8d_A Thioredoxin reductase ( 22.7 55 0.0019 29.0 3.4 33 14-51 15-47 (323)
371 3ruf_A WBGU; rossmann fold, UD 22.7 80 0.0027 28.5 4.5 35 13-51 24-58 (351)
372 2cvz_A Dehydrogenase, 3-hydrox 22.7 49 0.0017 29.1 3.0 31 14-50 1-31 (289)
373 3goc_A Endonuclease V; alpha-b 22.6 1.5E+02 0.0052 25.3 5.7 32 114-145 106-144 (237)
374 2b69_A UDP-glucuronate decarbo 22.6 82 0.0028 28.4 4.6 35 12-50 25-59 (343)
375 3ug7_A Arsenical pump-driving 22.5 1.2E+02 0.0042 27.6 5.7 40 13-52 24-64 (349)
376 3ged_A Short-chain dehydrogena 22.5 85 0.0029 27.2 4.3 33 16-51 3-35 (247)
377 3grc_A Sensor protein, kinase; 22.5 1.8E+02 0.0061 21.5 6.0 49 370-419 79-127 (140)
378 1hyq_A MIND, cell division inh 22.4 98 0.0033 26.6 4.9 38 15-52 2-41 (263)
379 1e6u_A GDP-fucose synthetase; 22.4 61 0.0021 28.9 3.6 32 14-49 3-34 (321)
380 1e7w_A Pteridine reductase; di 22.3 95 0.0033 27.4 4.8 32 15-49 9-40 (291)
381 3tem_A Ribosyldihydronicotinam 22.3 1.2E+02 0.004 25.8 5.2 36 15-50 2-40 (228)
382 3hh1_A Tetrapyrrole methylase 22.2 62 0.0021 24.1 3.0 17 33-49 70-86 (117)
383 1yqg_A Pyrroline-5-carboxylate 22.2 41 0.0014 29.2 2.3 31 15-50 1-32 (263)
384 3qvo_A NMRA family protein; st 22.2 1.5E+02 0.0051 24.9 5.9 35 14-51 22-57 (236)
385 2r7a_A Bacterial heme binding 22.1 89 0.003 26.8 4.5 36 101-143 52-89 (256)
386 2jzc_A UDP-N-acetylglucosamine 22.1 77 0.0026 27.0 3.9 40 13-52 26-72 (224)
387 1lld_A L-lactate dehydrogenase 22.1 52 0.0018 29.6 3.0 34 13-51 6-41 (319)
388 3ka7_A Oxidoreductase; structu 22.1 56 0.0019 30.6 3.4 32 15-51 1-32 (425)
389 1ydh_A AT5G11950; structural g 22.0 1.4E+02 0.0049 25.1 5.5 38 13-50 8-49 (216)
390 1qyc_A Phenylcoumaran benzylic 22.0 67 0.0023 28.4 3.8 34 14-51 4-37 (308)
391 3tfo_A Putative 3-oxoacyl-(acy 22.0 1.1E+02 0.0037 26.6 5.0 33 15-50 4-36 (264)
392 3m1a_A Putative dehydrogenase; 21.9 99 0.0034 26.9 4.8 35 14-51 4-38 (281)
393 1wcv_1 SOJ, segregation protei 21.8 80 0.0027 27.2 4.1 39 14-52 5-45 (257)
394 1vl8_A Gluconate 5-dehydrogena 21.8 95 0.0033 26.9 4.7 33 15-50 21-53 (267)
395 4fu0_A D-alanine--D-alanine li 21.8 57 0.0019 30.0 3.3 39 12-50 1-43 (357)
396 2nwq_A Probable short-chain de 21.7 85 0.0029 27.4 4.3 32 16-50 22-53 (272)
397 3obi_A Formyltetrahydrofolate 21.7 3.1E+02 0.01 24.3 7.9 111 10-145 85-197 (288)
398 4fs3_A Enoyl-[acyl-carrier-pro 21.7 82 0.0028 27.2 4.1 35 15-50 6-40 (256)
399 3aek_B Light-independent proto 21.7 3.7E+02 0.013 26.1 9.2 32 14-50 280-312 (525)
400 2a33_A Hypothetical protein; s 21.6 1.5E+02 0.0051 25.0 5.6 38 13-50 12-53 (215)
401 3gem_A Short chain dehydrogena 21.6 74 0.0025 27.6 3.9 34 15-51 27-60 (260)
402 2woj_A ATPase GET3; tail-ancho 21.6 90 0.0031 28.7 4.6 39 14-52 17-58 (354)
403 1oi4_A Hypothetical protein YH 21.6 1.9E+02 0.0066 23.5 6.3 38 14-52 23-60 (193)
404 3zq6_A Putative arsenical pump 21.6 1.1E+02 0.0038 27.5 5.2 38 15-52 14-52 (324)
405 1mxh_A Pteridine reductase 2; 21.5 95 0.0033 26.9 4.6 32 16-50 12-43 (276)
406 3rkr_A Short chain oxidoreduct 21.4 1E+02 0.0036 26.5 4.8 33 15-50 29-61 (262)
407 1wma_A Carbonyl reductase [NAD 21.4 1E+02 0.0035 26.4 4.8 34 14-50 3-37 (276)
408 4eso_A Putative oxidoreductase 21.3 93 0.0032 26.8 4.4 33 15-50 8-40 (255)
409 2q3e_A UDP-glucose 6-dehydroge 21.3 80 0.0027 30.3 4.3 32 14-50 5-38 (467)
410 3s55_A Putative short-chain de 21.3 97 0.0033 27.0 4.7 34 15-51 10-43 (281)
411 2ph1_A Nucleotide-binding prot 21.3 99 0.0034 26.7 4.6 39 14-52 17-57 (262)
412 1zl0_A Hypothetical protein PA 21.2 2.3E+02 0.0079 25.4 7.0 74 286-380 64-139 (311)
413 1x0v_A GPD-C, GPDH-C, glycerol 21.2 31 0.0011 31.6 1.3 35 12-51 6-47 (354)
414 3r1i_A Short-chain type dehydr 21.1 1E+02 0.0036 26.9 4.8 33 15-50 32-64 (276)
415 1f4p_A Flavodoxin; electron tr 21.1 84 0.0029 24.1 3.8 36 15-50 1-37 (147)
416 1t1j_A Hypothetical protein; s 21.1 1.3E+02 0.0043 23.0 4.5 34 13-46 6-47 (125)
417 3itj_A Thioredoxin reductase 1 21.0 46 0.0016 29.9 2.4 34 13-51 21-54 (338)
418 1gy8_A UDP-galactose 4-epimera 21.0 1E+02 0.0036 28.3 5.0 33 14-50 2-35 (397)
419 2c20_A UDP-glucose 4-epimerase 21.0 89 0.0031 27.9 4.4 33 14-50 1-33 (330)
420 2z1m_A GDP-D-mannose dehydrata 21.0 86 0.0029 28.1 4.3 34 14-51 3-36 (345)
421 2gdz_A NAD+-dependent 15-hydro 20.9 1.4E+02 0.0047 25.8 5.5 32 16-50 8-39 (267)
422 3qjg_A Epidermin biosynthesis 20.9 3.3E+02 0.011 21.9 8.0 114 273-397 6-142 (175)
423 2gkg_A Response regulator homo 20.9 1.1E+02 0.0039 22.0 4.4 47 370-419 79-125 (127)
424 3lk7_A UDP-N-acetylmuramoylala 20.9 1.1E+02 0.0039 29.1 5.3 34 12-50 7-40 (451)
425 2q8p_A Iron-regulated surface 20.9 1.2E+02 0.0041 26.0 5.1 32 114-145 59-91 (260)
426 4fn4_A Short chain dehydrogena 20.9 99 0.0034 26.9 4.5 34 14-50 6-39 (254)
427 3c7a_A Octopine dehydrogenase; 20.9 38 0.0013 31.8 1.9 31 14-49 2-33 (404)
428 4dqx_A Probable oxidoreductase 20.9 1E+02 0.0035 27.0 4.7 33 15-50 27-59 (277)
429 3t6k_A Response regulator rece 20.8 2.6E+02 0.0088 20.6 7.1 47 371-419 78-124 (136)
430 2wtm_A EST1E; hydrolase; 1.60A 20.8 1.4E+02 0.0046 25.1 5.4 36 15-50 27-64 (251)
431 1sb8_A WBPP; epimerase, 4-epim 20.8 1.1E+02 0.0037 27.7 5.0 34 13-50 26-59 (352)
432 2l82_A Designed protein OR32; 20.8 2E+02 0.0067 20.9 5.1 34 275-312 3-36 (162)
433 4ao6_A Esterase; hydrolase, th 20.7 90 0.0031 26.8 4.2 38 13-50 54-93 (259)
434 3dm5_A SRP54, signal recogniti 20.7 1.4E+02 0.0049 28.3 5.8 42 14-55 100-141 (443)
435 3pid_A UDP-glucose 6-dehydroge 20.7 67 0.0023 30.5 3.5 33 13-51 35-67 (432)
436 2cfc_A 2-(R)-hydroxypropyl-COM 20.7 1.2E+02 0.0041 25.6 5.1 33 15-50 2-34 (250)
437 1udb_A Epimerase, UDP-galactos 20.6 1E+02 0.0035 27.6 4.8 32 15-50 1-32 (338)
438 1fy2_A Aspartyl dipeptidase; s 20.6 1.3E+02 0.0043 25.6 5.0 42 263-306 24-65 (229)
439 3o1l_A Formyltetrahydrofolate 20.6 1.8E+02 0.0062 26.0 6.2 118 288-432 167-286 (302)
440 2q1w_A Putative nucleotide sug 20.6 1.2E+02 0.004 27.3 5.1 35 13-51 20-54 (333)
441 2o8n_A APOA-I binding protein; 20.6 80 0.0027 27.7 3.8 33 15-50 80-114 (265)
442 2bgk_A Rhizome secoisolaricire 20.6 1.3E+02 0.0045 25.9 5.4 33 15-50 16-48 (278)
443 3ia7_A CALG4; glycosysltransfe 20.5 1.4E+02 0.0047 27.4 5.8 36 274-311 6-41 (402)
444 4iin_A 3-ketoacyl-acyl carrier 20.5 1.1E+02 0.0038 26.5 4.9 33 15-50 29-61 (271)
445 3nrn_A Uncharacterized protein 20.5 68 0.0023 30.1 3.6 31 15-50 1-31 (421)
446 4egf_A L-xylulose reductase; s 20.4 1.1E+02 0.0038 26.4 4.8 33 15-50 20-52 (266)
447 4g81_D Putative hexonate dehyd 20.4 83 0.0028 27.4 3.9 34 14-50 8-41 (255)
448 3dfz_A SIRC, precorrin-2 dehyd 20.4 1.1E+02 0.0037 26.0 4.5 34 13-51 30-63 (223)
449 4hp8_A 2-deoxy-D-gluconate 3-d 20.4 1E+02 0.0036 26.6 4.4 34 14-50 8-41 (247)
450 1pjq_A CYSG, siroheme synthase 20.4 3.2E+02 0.011 25.9 8.4 147 266-438 7-167 (457)
451 1vco_A CTP synthetase; tetrame 20.4 74 0.0025 31.3 3.8 41 11-51 8-51 (550)
452 4h1h_A LMO1638 protein; MCCF-l 20.3 1.9E+02 0.0065 26.1 6.4 71 287-378 63-135 (327)
453 2ehd_A Oxidoreductase, oxidore 20.3 1.3E+02 0.0046 25.1 5.2 33 15-50 5-37 (234)
454 2ph3_A 3-oxoacyl-[acyl carrier 20.3 1.2E+02 0.0039 25.6 4.8 32 15-49 1-32 (245)
455 1rkx_A CDP-glucose-4,6-dehydra 20.3 1.1E+02 0.0038 27.6 5.0 35 13-51 8-42 (357)
456 3grp_A 3-oxoacyl-(acyl carrier 20.3 1.1E+02 0.0039 26.4 4.8 33 15-50 27-59 (266)
457 4egs_A Ribose 5-phosphate isom 20.3 1.1E+02 0.0038 24.9 4.4 39 12-50 32-71 (180)
458 3dkr_A Esterase D; alpha beta 20.3 92 0.0032 25.7 4.2 37 14-50 21-57 (251)
459 4e08_A DJ-1 beta; flavodoxin-l 20.2 2.6E+02 0.0091 22.5 6.9 50 15-66 6-55 (190)
460 3gl9_A Response regulator; bet 20.2 2.5E+02 0.0084 20.2 8.1 47 370-418 75-121 (122)
461 2rk3_A Protein DJ-1; parkinson 20.2 2.3E+02 0.0077 23.1 6.5 38 14-52 3-40 (197)
462 3lf2_A Short chain oxidoreduct 20.2 1.1E+02 0.0037 26.5 4.7 33 15-50 8-40 (265)
463 1t5b_A Acyl carrier protein ph 20.2 1.1E+02 0.0036 25.0 4.4 37 14-50 1-43 (201)
464 2rir_A Dipicolinate synthase, 20.2 1.2E+02 0.0042 26.9 5.1 33 12-49 5-37 (300)
465 1x1t_A D(-)-3-hydroxybutyrate 20.2 1.1E+02 0.0036 26.4 4.6 33 15-50 4-36 (260)
466 2nm0_A Probable 3-oxacyl-(acyl 20.2 1.1E+02 0.0037 26.3 4.7 33 15-50 21-53 (253)
467 1zmo_A Halohydrin dehalogenase 20.2 77 0.0026 27.0 3.6 30 16-48 2-31 (244)
468 3ga2_A Endonuclease V; alpha-b 20.1 94 0.0032 26.8 3.9 32 114-145 108-146 (246)
469 1imj_A CIB, CCG1-interacting f 20.1 1.8E+02 0.0063 23.1 6.0 36 15-50 32-69 (210)
470 2uyy_A N-PAC protein; long-cha 20.1 73 0.0025 28.5 3.6 32 14-50 30-61 (316)
471 3f9i_A 3-oxoacyl-[acyl-carrier 20.1 1.4E+02 0.0047 25.3 5.3 35 13-50 12-46 (249)
472 3m6m_D Sensory/regulatory prot 20.0 1.1E+02 0.0039 23.0 4.4 33 114-146 57-100 (143)
473 1qo0_D AMIR; binding protein, 20.0 3.3E+02 0.011 21.6 7.9 48 370-419 78-125 (196)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=1.9e-70 Score=537.33 Aligned_cols=435 Identities=26% Similarity=0.471 Sum_probs=358.8
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCCCCCCC-C----CCCCeeEEecCCCCCCcccccccHH
Q 040486 11 QKKGRRLILFPLPLQGHINPMLQLANILYSKG--FSITIIHTNFNSPNP-S----NYPHFTFCSIEDSLSETEASTADLV 83 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~G--h~Vt~~~~~~~~~~~-~----~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (460)
...+.||+++|+|++||++|++.||+.|+++| +.|||++++.+.... . ..++++|+.+|++++++.+...+..
T Consensus 10 ~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~~ 89 (454)
T 3hbf_A 10 GNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGNPR 89 (454)
T ss_dssp --CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred CCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCChH
Confidence 34578999999999999999999999999999 999999997433211 1 1257999999999988765544444
Q ss_pred HHHHHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhcc-
Q 040486 84 ALLSLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQK- 162 (460)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 162 (460)
+.+..+...+...+++.++++.+... .++||||+|.+++|+..+|+++|||++.+++++++.++.+.+.+.....
T Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 90 EPIFLFIKAMQENFKHVIDEAVAETG----KNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC----CCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 45555555566667777777654322 4799999999999999999999999999999999998887775544332
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCCCCccc-ccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcCCCCccc
Q 040486 163 GYFPIRDSQSEAPVPELPPLRVKDIPVVET-CYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDFPIPMFP 241 (460)
Q Consensus 163 ~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~p~~~ 241 (460)
+............+|+++.++..+++.... .....+.+.+.+..+.+..++.+++||+++||++.++.+++.+ +++++
T Consensus 166 ~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~-~~v~~ 244 (454)
T 3hbf_A 166 GSKEVHDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNSKF-KLLLN 244 (454)
T ss_dssp CHHHHTTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHTTS-SCEEE
T ss_pred CCCccccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHhcC-CCEEE
Confidence 110001111223478888888888886543 3344567777788888889999999999999999998888754 57999
Q ss_pred cCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCC
Q 040486 242 IGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIE 321 (460)
Q Consensus 242 vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~ 321 (460)
|||++...+. ...+.+.++.+||+.++++++|||||||....+.+++.+++.++++.+++|||+++... ..
T Consensus 245 vGPl~~~~~~---~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~------~~ 315 (454)
T 3hbf_A 245 VGPFNLTTPQ---RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDP------KE 315 (454)
T ss_dssp CCCHHHHSCC---SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCH------HH
T ss_pred ECCccccccc---ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcc------hh
Confidence 9999875432 12334566899999988899999999999998889999999999999999999998754 23
Q ss_pred CCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeC
Q 040486 322 PLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLE 401 (460)
Q Consensus 322 ~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 401 (460)
.+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|+++||+.||+++++.+|+|+.++
T Consensus 316 ~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~ 395 (454)
T 3hbf_A 316 KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD 395 (454)
T ss_dssp HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG
T ss_pred cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec
Confidence 48999999999999999999999999999988899999999999999999999999999999999999998449999998
Q ss_pred C-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 402 R-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 402 ~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
. .++.++|.++|+++|+|+++++||+||+++++++++++.+||||.+++++|++.|.+
T Consensus 396 ~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 396 NGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp GGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 7 899999999999999985566999999999999999999999999999999999864
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=9.2e-65 Score=507.42 Aligned_cols=440 Identities=33% Similarity=0.667 Sum_probs=341.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---------CCCeeEEecCCCCCCcc---ccc
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSN---------YPHFTFCSIEDSLSETE---AST 79 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~---------~~g~~~~~~~~~~~~~~---~~~ 79 (460)
++++||+++|++++||++|++.||++|++|||+|||++++.+.....+ .++++|+.+|++++... ...
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 456899999999999999999999999999999999999855322111 13899999998777521 112
Q ss_pred ccHHHHHHHHHHhcchhHHHHHHHHhccc-ccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcch
Q 040486 80 ADLVALLSLLNVQCVVPFRNCLAKLLSNV-EEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPV 158 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~-~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 158 (460)
.+...++..+...+...++++++.+.... . .+||+||+|.++.|+..+|+++|||++.++++++..+....+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 161 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNV----PPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRS 161 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSS----CCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHH
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccC----CCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHH
Confidence 34444555555677778888888775320 1 479999999999999999999999999999999887766655565
Q ss_pred hhccCCCCCCCC---------CCCccCCCCCCCCCCCCCCcccc--cchhHHHHHHHHHhhcccccEEEEcChhHhhHHH
Q 040486 159 LSQKGYFPIRDS---------QSEAPVPELPPLRVKDIPVVETC--YRETLHRLVTEATNQMKVSSGCIWNSLQDLELAS 227 (460)
Q Consensus 159 ~~~~~~~p~~~~---------~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~ 227 (460)
+...++.|.... ...+.+++++.++..+++..... ....+.+.+.+..+...+++.+++|++++||++.
T Consensus 162 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 162 FVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 555566654321 11223455554555555433211 1233445555666777889999999999999998
Q ss_pred HHHhhhcCCCCccccCCCCcC-CCC-------C-CcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHH
Q 040486 228 LTKFHQDFPIPMFPIGPFHKF-FSA-------S-SSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGL 298 (460)
Q Consensus 228 ~~~~~~~~~~p~~~vG~l~~~-~~~-------~-~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al 298 (460)
++.+++.+ +++++|||++.. ... . +...++.+.++.+|++.++++++|||||||....+.+++.+++.++
T Consensus 242 ~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 320 (482)
T 2pq6_A 242 INALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGL 320 (482)
T ss_dssp HHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHH
Confidence 88888866 679999999863 111 0 0111244456889999887889999999999887888899999999
Q ss_pred HcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccc
Q 040486 299 ANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQP 378 (460)
Q Consensus 299 ~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P 378 (460)
++.+++|||+++.....+. ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|
T Consensus 321 ~~~~~~~l~~~~~~~~~~~--~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P 398 (482)
T 2pq6_A 321 ANCKKSFLWIIRPDLVIGG--SVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP 398 (482)
T ss_dssp HHTTCEEEEECCGGGSTTT--GGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HhcCCcEEEEEcCCccccc--cccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecC
Confidence 9999999999986431110 12378899888999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhHHHHh-hhhcceeeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 379 CFGDQMVNARYVS-DVWKVGLHLERKLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 379 ~~~DQ~~na~~v~-~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+..||+.||++++ + +|+|+.++..++.+.|.++|+++|+|+++++||+||+++++++++++.+|||+.+++++|++.+
T Consensus 399 ~~~dQ~~na~~~~~~-~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~ 477 (482)
T 2pq6_A 399 FFADQPTDCRFICNE-WEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV 477 (482)
T ss_dssp CSTTHHHHHHHHHHT-SCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHH-hCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 9999999999996 7 6999999767999999999999999943447999999999999999999999999999999998
Q ss_pred Hc
Q 040486 458 LS 459 (460)
Q Consensus 458 ~~ 459 (460)
++
T Consensus 478 ~~ 479 (482)
T 2pq6_A 478 LL 479 (482)
T ss_dssp TC
T ss_pred Hh
Confidence 65
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.7e-62 Score=489.36 Aligned_cols=440 Identities=26% Similarity=0.429 Sum_probs=327.9
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCCC--CCCCCC-----CCCeeEEecCCCCCCcccccccH
Q 040486 11 QKKGRRLILFPLPLQGHINPMLQLANILYSK-GFSITIIHTNFN--SPNPSN-----YPHFTFCSIEDSLSETEASTADL 82 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~-Gh~Vt~~~~~~~--~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~ 82 (460)
..+++||+++|++++||++|++.||++|++| ||+|||++++.+ ...... ..+++|+.+|.....+.....+.
T Consensus 3 ~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~ 82 (480)
T 2vch_A 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSSTRI 82 (480)
T ss_dssp ---CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred CCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCchhH
Confidence 3456899999999999999999999999998 999999999763 222111 25899999986422111111233
Q ss_pred HHHHHHHHHhcchhHHHHHHHHhcccccccCCCe-eEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhc
Q 040486 83 VALLSLLNVQCVVPFRNCLAKLLSNVEEEEKEPI-ACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQ 161 (460)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~kp-D~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 161 (460)
...+......+...++++++.+... .++ |+||+|.++.|+..+|+++|||++.+++++++.++.+.+++....
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~~------~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~ 156 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVEG------GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDE 156 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHT------TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHhccC------CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHh
Confidence 3334344456666777777776421 368 999999999999999999999999999999877766554443222
Q ss_pred cCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcC--CCCc
Q 040486 162 KGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDF--PIPM 239 (460)
Q Consensus 162 ~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~--~~p~ 239 (460)
....+..+......+|+++.+...+++.....+.....+.+.+....+....++++|++.+||.+.+..+.+.. .+++
T Consensus 157 ~~~~~~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v 236 (480)
T 2vch_A 157 TVSCEFRELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPV 236 (480)
T ss_dssp HCCSCGGGCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCE
T ss_pred cCCCcccccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcE
Confidence 11111111011122455544444444433222212233444445556677888899999999998777665411 2469
Q ss_pred cccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCC---
Q 040486 240 FPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRG--- 316 (460)
Q Consensus 240 ~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~--- 316 (460)
++|||++..... ....+.+.++.+|++.++++++|||||||....+.+++.+++.+++.++++|||+++.....+
T Consensus 237 ~~vGpl~~~~~~--~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~ 314 (480)
T 2vch_A 237 YPVGPLVNIGKQ--EAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSS 314 (480)
T ss_dssp EECCCCCCCSCS--CC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTT
T ss_pred EEEecccccccc--ccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccccccc
Confidence 999999865321 000123456889999987889999999999988889999999999999999999998653210
Q ss_pred ------CccC-CCCchhHHhhcCCCCcccc-ccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHH
Q 040486 317 ------AEWI-EPLPQGFLETLDGRGHMVK-WAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNAR 388 (460)
Q Consensus 317 ------~~~~-~~lp~~~~~~~~~~~~v~~-~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~ 388 (460)
.+.. ..+|+||.++.+++++++. |+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+
T Consensus 315 ~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~ 394 (480)
T 2vch_A 315 YFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAV 394 (480)
T ss_dssp TTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred ccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccchHHHH
Confidence 0001 3589999999998888775 9999999999998889999999999999999999999999999999999
Q ss_pred HH-hhhhcceeeeCC----ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 389 YV-SDVWKVGLHLER----KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 389 ~v-~~~~G~g~~~~~----~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
++ ++ +|+|+.++. .++.++|.++|+++|+++++++||+||+++++++++++.++|++.+++++|++.+++
T Consensus 395 ~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 395 LLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 97 68 699999975 489999999999999954448999999999999999999999999999999998864
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.9e-62 Score=485.87 Aligned_cols=434 Identities=25% Similarity=0.482 Sum_probs=328.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCCCCC-----CCC-CCCCeeEEecCCCCCCcccccccHH
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFS--ITIIHTNFNSP-----NPS-NYPHFTFCSIEDSLSETEASTADLV 83 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~--Vt~~~~~~~~~-----~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (460)
++++||+++|+|++||++|++.||+.|++|||+ |||++++.+.. ... ...+++|+.+++++++..+......
T Consensus 5 ~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~~~~ 84 (456)
T 2c1x_A 5 TTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQ 84 (456)
T ss_dssp --CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTT
T ss_pred CCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccCChH
Confidence 346899999999999999999999999999755 57788753211 011 0248999999988876542222233
Q ss_pred HHHHHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhcc-
Q 040486 84 ALLSLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQK- 162 (460)
Q Consensus 84 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 162 (460)
..+..+...+...+++.++++.+..+ .+||+||+|.++.|+..+|+++|||++.++++++..+..+.+.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~ 160 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETG----RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKI 160 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT----CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccC----CCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhcc
Confidence 33334444444455566665543211 4799999999999999999999999999999988776654433321111
Q ss_pred CCCCC-C-CCCCCccCCCCCCCCCCCCCCccc--ccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcCCCC
Q 040486 163 GYFPI-R-DSQSEAPVPELPPLRVKDIPVVET--CYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDFPIP 238 (460)
Q Consensus 163 ~~~p~-~-~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~p 238 (460)
++.+. . .......+|++..++..+++.... .....+.+.+.+.....++++.+++|++++||++.++.+++.+ ++
T Consensus 161 ~~~~~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~-~~ 239 (456)
T 2c1x_A 161 GVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKL-KT 239 (456)
T ss_dssp CSSCCTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHHHS-SC
T ss_pred CCcccccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHHhcC-CC
Confidence 11110 0 011112356665555555553221 1122344555556666678899999999999999888878765 57
Q ss_pred ccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCc
Q 040486 239 MFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAE 318 (460)
Q Consensus 239 ~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 318 (460)
+++|||++..... ..++.+.++.+|++.++++++|||||||......+++.+++.+++..+++|||+++...
T Consensus 240 ~~~vGpl~~~~~~---~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~----- 311 (456)
T 2c1x_A 240 YLNIGPFNLITPP---PVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKA----- 311 (456)
T ss_dssp EEECCCHHHHC------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGG-----
T ss_pred EEEecCcccCccc---ccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcc-----
Confidence 9999999865422 11344456889999887889999999999988888999999999999999999998653
Q ss_pred cCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhccee
Q 040486 319 WIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGL 398 (460)
Q Consensus 319 ~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~ 398 (460)
...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||+++++.||+|+
T Consensus 312 -~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~ 390 (456)
T 2c1x_A 312 -RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV 390 (456)
T ss_dssp -GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEE
T ss_pred -hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEE
Confidence 2348888888888999999999999999999988899999999999999999999999999999999999999349999
Q ss_pred eeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 399 HLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 399 ~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
.++. .++.+.|.++|+++|+|+++++||+||++++++++++..+||||.+++++|++.+.+
T Consensus 391 ~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 391 RIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp ECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred EecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 9987 799999999999999985455999999999999999999999999999999998864
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3.5e-59 Score=463.73 Aligned_cols=424 Identities=25% Similarity=0.434 Sum_probs=324.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCC-C--------CCCCCeeEEecCCC-CCCcccccc
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSK--GFSITIIHTNFNSPN-P--------SNYPHFTFCSIEDS-LSETEASTA 80 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~-~--------~~~~g~~~~~~~~~-~~~~~~~~~ 80 (460)
+++||+++|+|++||++|++.||+.|+++ ||+|||++++.+... . ....+++|+.+|++ ++.. +...
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~-~~~~ 86 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQ-ELLK 86 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCG-GGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCcc-cccC
Confidence 46899999999999999999999999999 999999999865321 0 11258999999975 3422 1111
Q ss_pred cHHHHHHHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcchhh
Q 040486 81 DLVALLSLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLS 160 (460)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 160 (460)
+....+......+...++++++++ . . .+||+||+|.++.|+..+|+++|||++.++++++..+..+.+++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~ll~~~-~--~----~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 87 SPEFYILTFLESLIPHVKATIKTI-L--S----NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp SHHHHHHHHHHHTHHHHHHHHHHH-C--C----TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred CccHHHHHHHHhhhHHHHHHHHhc-c--C----CCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 111113333455666677777776 2 1 47999999999999999999999999999999888777665554332
Q ss_pred ccCCCCCCCCCC---CccCCCC-CCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcC-
Q 040486 161 QKGYFPIRDSQS---EAPVPEL-PPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDF- 235 (460)
Q Consensus 161 ~~~~~p~~~~~~---~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~- 235 (460)
.. .+...... ...+|++ ..+...+++.....+ ......+.+....+..++.+++||+++||++...++.+..
T Consensus 160 ~~--~~~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~ 236 (463)
T 2acv_A 160 IE--EVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDE 236 (463)
T ss_dssp TT--CCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCT
T ss_pred cc--CCCCCccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHHhccc
Confidence 11 11111111 1234555 444444444222111 1233444444555677888899999999998877776644
Q ss_pred -CCCccccCCCCcCCC-CCCcccccCccccccccCCCCCCeEEEEEccccc-cCCHHHHHHHHHHHHcCCCCEEEEEcCC
Q 040486 236 -PIPMFPIGPFHKFFS-ASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIA-AINETEFLEVAWGLANSKVPFLWVVRPG 312 (460)
Q Consensus 236 -~~p~~~vG~l~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (460)
.+++++|||++.... ......++.+.++.+|++.++++++|||||||.. ..+.+++.+++.++++.+++|||+++.+
T Consensus 237 p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 316 (463)
T 2acv_A 237 KIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAE 316 (463)
T ss_dssp TSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCC
T ss_pred cCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 456999999986542 1000001234568899998888899999999999 7788889999999999999999999863
Q ss_pred ccCCCccCCCCchhHHhhc--CCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHH
Q 040486 313 LVRGAEWIEPLPQGFLETL--DGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYV 390 (460)
Q Consensus 313 ~~~~~~~~~~lp~~~~~~~--~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v 390 (460)
. +.+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++|++++|||+|++|++.||+.||+++
T Consensus 317 ~-------~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~l 389 (463)
T 2acv_A 317 K-------KVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRL 389 (463)
T ss_dssp G-------GGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH
T ss_pred c-------ccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHH
Confidence 1 13778888777 88999999999999999999888999999999999999999999999999999999995
Q ss_pred -hhhhcceeee-C----C--ccCHHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 391 -SDVWKVGLHL-E----R--KLERGEVERTIRRVMT-EAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 391 -~~~~G~g~~~-~----~--~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
++ +|+|+.+ + . .++.++|.++|+++|+ + ++||+||+++++++++++.++|++.+++++|++.++
T Consensus 390 v~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~---~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 390 VKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD---SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT---CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 88 6999999 3 2 4899999999999997 4 689999999999999999999999999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8.8e-47 Score=373.01 Aligned_cols=398 Identities=15% Similarity=0.217 Sum_probs=270.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcccc----cccHHHHH
Q 040486 11 QKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETEAS----TADLVALL 86 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~ 86 (460)
.+++|||+|++++++||++|+++||++|+++||+|+|++++.+.+.... .|++|++++..++..... ..+....+
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA-AGATPVVYDSILPKESNPEESWPEDQESAM 87 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCEEEECCCCSCCTTCTTCCCCSSHHHHH
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEecCccccccccchhhcchhHHHHH
Confidence 4667999999999999999999999999999999999999865443333 489999998765533211 12333333
Q ss_pred HHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhccCCCC
Q 040486 87 SLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFP 166 (460)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 166 (460)
..+.......+.++ .++.+. .+||+||+|.+..|+..+|+.+|||++.+++.+..........+.. ...+..
T Consensus 88 ~~~~~~~~~~~~~l-~~~l~~------~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~-~~~~~~ 159 (424)
T 2iya_A 88 GLFLDEAVRVLPQL-EDAYAD------DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAV-QDPTAD 159 (424)
T ss_dssp HHHHHHHHHHHHHH-HHHTTT------SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGG-SCCCC-
T ss_pred HHHHHHHHHHHHHH-HHHHhc------cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccc-cccccc
Confidence 33333222223333 333322 5799999999888999999999999999987653110000000000 000000
Q ss_pred CCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHh----------hcccccEEEEcChhHhhHHHHHHhhhcCC
Q 040486 167 IRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATN----------QMKVSSGCIWNSLQDLELASLTKFHQDFP 236 (460)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~l~~~~~~~~~~~~~ 236 (460)
.. . ....+...... ..+.... .....+.+.+.+... .....+.+++++++.|+++ ...++
T Consensus 160 ~~-~--~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~~~~ 229 (424)
T 2iya_A 160 RG-E--EAAAPAGTGDA-EEGAEAE-DGLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK-----GDTVG 229 (424)
T ss_dssp ------------------------H-HHHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT-----GGGCC
T ss_pred cc-c--ccccccccccc-hhhhccc-hhHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC-----ccCCC
Confidence 00 0 00000000000 0000000 000001111111111 1114567899999999864 23455
Q ss_pred CCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCC
Q 040486 237 IPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRG 316 (460)
Q Consensus 237 ~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~ 316 (460)
.++++|||+..... +..+|++..+++++|||++||......+.+..+++++++.+++++|.++.....
T Consensus 230 ~~~~~vGp~~~~~~-----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~- 297 (424)
T 2iya_A 230 DNYTFVGPTYGDRS-----------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP- 297 (424)
T ss_dssp TTEEECCCCCCCCG-----------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCG-
T ss_pred CCEEEeCCCCCCcc-----------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCCh-
Confidence 66999999764321 124677655678899999999986667888899999999889999988754211
Q ss_pred CccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcc
Q 040486 317 AEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKV 396 (460)
Q Consensus 317 ~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~ 396 (460)
+.+..+|++ +++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ +|+
T Consensus 298 -~~~~~~~~~--------v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~ 365 (424)
T 2iya_A 298 -ADLGEVPPN--------VEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVE-LGL 365 (424)
T ss_dssp -GGGCSCCTT--------EEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTS
T ss_pred -HHhccCCCC--------eEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHH-CCC
Confidence 112224444 489999999999999999 99999999999999999999999999999999999999 599
Q ss_pred eeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 397 GLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 397 g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
|+.++. +++.++|.++|+++++| +++++++++++++++ +.++..++++.+.+.+.
T Consensus 366 g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 366 GRHIPRDQVTAEKLREAVLAVASD---PGVAERLAAVRQEIR----EAGGARAAADILEGILA 421 (424)
T ss_dssp EEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred EEEcCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCcHHHHHHHHHHHHh
Confidence 999987 78999999999999999 899999999999998 56778888887777654
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=3.3e-46 Score=366.13 Aligned_cols=357 Identities=16% Similarity=0.194 Sum_probs=233.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcc-------c-------cc
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETE-------A-------ST 79 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~-------~~ 79 (460)
.|||+|+++|++||++|+++||++|++|||+|||++++....... .|+.+..+..+..... . ..
T Consensus 22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (400)
T 4amg_A 22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE--AGLCAVDVSPGVNYAKLFVPDDTDVTDPMHSEG 99 (400)
T ss_dssp CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT--TTCEEEESSTTCCSHHHHSCCC-----------
T ss_pred CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh--cCCeeEecCCchhHhhhccccccccccccchhh
Confidence 599999999999999999999999999999999999976544333 5888888764332111 0 00
Q ss_pred ccHHHHHHHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcchh
Q 040486 80 ADLVALLSLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVL 159 (460)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 159 (460)
.........+.......+.+++..+.+ ++||+||+|.+++++..+|+.+|||++.+..++.........
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~---- 168 (400)
T 4amg_A 100 LGEGFFAEMFARVSAVAVDGALRTARS-------WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGA---- 168 (400)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHH----
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCCEEEECcchHHHHHHHHHcCCCceeecccccccccchhh----
Confidence 000111111112222222233333332 579999999999999999999999999865542111000000
Q ss_pred hccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhccc-ccEEEEcChhHhhHHHHHHhhhcCCCC
Q 040486 160 SQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKV-SSGCIWNSLQDLELASLTKFHQDFPIP 238 (460)
Q Consensus 160 ~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~~~~~~~~~~~~~~p 238 (460)
.....+.+.+.+..-.... ....+....+.+... .......+
T Consensus 169 ---------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 211 (400)
T 4amg_A 169 ---------------------------------LIRRAMSKDYERHGVTGEPTGSVRLTTTPPSVEAL----LPEDRRSP 211 (400)
T ss_dssp ---------------------------------HHHHHTHHHHHHTTCCCCCSCEEEEECCCHHHHHT----SCGGGCCT
T ss_pred ---------------------------------HHHHHHHHHHHHhCCCcccccchhhcccCchhhcc----CcccccCC
Confidence 0001111111111111111 222222222222111 01100111
Q ss_pred -ccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCC--HHHHHHHHHHHHcCCCCEEEEEcCCccC
Q 040486 239 -MFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAIN--ETEFLEVAWGLANSKVPFLWVVRPGLVR 315 (460)
Q Consensus 239 -~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~--~~~~~~~~~al~~~~~~~i~~~~~~~~~ 315 (460)
...+.+.... ....+.+|++..+++++|||||||..... .+.+..++++++..+.+++|..++....
T Consensus 212 ~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~ 281 (400)
T 4amg_A 212 GAWPMRYVPYN----------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA 281 (400)
T ss_dssp TCEECCCCCCC----------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC
T ss_pred cccCccccccc----------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc
Confidence 2222222211 12335678888888999999999987633 4667889999999999999998776432
Q ss_pred CCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhc
Q 040486 316 GAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWK 395 (460)
Q Consensus 316 ~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 395 (460)
. ...+|+|+ ++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+.+||+.||+++++ .|
T Consensus 282 ~---~~~~~~~v--------~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G 347 (400)
T 4amg_A 282 L---LGELPANV--------RVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LG 347 (400)
T ss_dssp C---CCCCCTTE--------EEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HT
T ss_pred c---cccCCCCE--------EEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CC
Confidence 2 44567776 89999999999999999 99999999999999999999999999999999999999 59
Q ss_pred ceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 040486 396 VGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLIS 455 (460)
Q Consensus 396 ~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 455 (460)
+|+.++. +.+.+ +|+++|+| ++||++|++++++++ +..+..+.++.+.+
T Consensus 348 ~g~~l~~~~~~~~----al~~lL~d---~~~r~~a~~l~~~~~----~~~~~~~~a~~le~ 397 (400)
T 4amg_A 348 IGFDAEAGSLGAE----QCRRLLDD---AGLREAALRVRQEMS----EMPPPAETAAXLVA 397 (400)
T ss_dssp SEEECCTTTCSHH----HHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHH
T ss_pred CEEEcCCCCchHH----HHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHH
Confidence 9999987 66654 67789999 999999999999998 44556666655543
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.2e-44 Score=350.55 Aligned_cols=379 Identities=12% Similarity=0.073 Sum_probs=252.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcccc-cccHHHHHHHHHHhc
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETEAS-TADLVALLSLLNVQC 93 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 93 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++........ .|++|+.++......... .......+..+ +
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~ 76 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE-VGVPHVPVGPSARAPIQRAKPLTAEDVRRF---T 76 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCCEEECCC-------CCSCCCHHHHHHH---H
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH-cCCeeeeCCCCHHHHhhcccccchHHHHHH---H
Confidence 799999999999999999999999999999999999764433333 589999998643211110 00111111111 1
Q ss_pred chhHHHHHHHHhcccccccCCCeeEEEecC-Cchh--HHHHHHHcCCceEEEecccHHHHHHHHhcchhhccCCCCCCCC
Q 040486 94 VVPFRNCLAKLLSNVEEEEKEPIACLITDA-TWYF--TQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPIRDS 170 (460)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 170 (460)
...+...++++.+.. .+||+||+|. +..+ +..+|+.+|||++.+++++.+. ...+.|....
T Consensus 77 ~~~~~~~~~~l~~~~-----~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~-----------~~~~~p~~~~ 140 (415)
T 1iir_A 77 TEAIATQFDEIPAAA-----EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV-----------PSPYYPPPPL 140 (415)
T ss_dssp HHHHHHHHHHHHHHT-----TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSSCCCC-
T ss_pred HHHHHHHHHHHHHHh-----cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----------CCcccCCccC
Confidence 122333444444211 5899999998 6678 8999999999999998774321 0111121100
Q ss_pred CCCccCCCCCCCCCCCCCCc-ccc-cchhHHHHHHHHHhhc------------ccccEEEEcChhHhhH-HHHHHhhhcC
Q 040486 171 QSEAPVPELPPLRVKDIPVV-ETC-YRETLHRLVTEATNQM------------KVSSGCIWNSLQDLEL-ASLTKFHQDF 235 (460)
Q Consensus 171 ~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~~~~~~~~~~~~------------~~~~~~l~~~~~~l~~-~~~~~~~~~~ 235 (460)
. ..+++ ....+.+... ... ....+...+......+ ... .++.|+++.|++ + ++.+
T Consensus 141 ~--~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-----~~~~ 210 (415)
T 1iir_A 141 G--EPSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-----PTDL 210 (415)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC-----CCSS
T ss_pred C--ccccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC-----cccC
Confidence 0 00000 0000000000 000 0000001111111111 112 468889888875 3 2212
Q ss_pred CCCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccC
Q 040486 236 PIPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVR 315 (460)
Q Consensus 236 ~~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~ 315 (460)
++++|||+..... .+.+.++.+|++.. +++|||++||.. ...+....+++++++.+++++|+++.....
T Consensus 211 --~~~~vG~~~~~~~------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~ 279 (415)
T 1iir_A 211 --DAVQTGAWILPDE------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLV 279 (415)
T ss_dssp --CCEECCCCCCCCC------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC
T ss_pred --CeEeeCCCccCcc------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 6899999986532 12334578898753 578999999987 567888889999999999999998765321
Q ss_pred CCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhc
Q 040486 316 GAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWK 395 (460)
Q Consensus 316 ~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G 395 (460)
...+++++ ++.+|+||.++|+.+++ ||||||+||++||+++|||+|++|...||+.||+++++ .|
T Consensus 280 ----~~~~~~~v--------~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g 344 (415)
T 1iir_A 280 ----LPDDGADC--------FAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LG 344 (415)
T ss_dssp ----CSSCGGGE--------EECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HT
T ss_pred ----ccCCCCCE--------EEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-CC
Confidence 12345555 88999999999999999 99999999999999999999999999999999999999 59
Q ss_pred ceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 396 VGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 396 ~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+|+.++. +++.+.|.++|+++ +| ++|++++++++++++ ..++..+.++.+.+.+
T Consensus 345 ~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 399 (415)
T 1iir_A 345 VGVAHDGPIPTFDSLSAALATA-LT---PETHARATAVAGTIR----TDGAAVAARLLLDAVS 399 (415)
T ss_dssp SEEECSSSSCCHHHHHHHHHHH-TS---HHHHHHHHHHHHHSC----SCHHHHHHHHHHHHHH
T ss_pred CcccCCcCCCCHHHHHHHHHHH-cC---HHHHHHHHHHHHHHh----hcChHHHHHHHHHHHH
Confidence 9999987 78999999999999 99 899999999999887 4555555555555443
No 9
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.2e-42 Score=342.53 Aligned_cols=387 Identities=16% Similarity=0.205 Sum_probs=265.6
Q ss_pred ccccCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcccc----ccc
Q 040486 6 DSHIHQKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETEAS----TAD 81 (460)
Q Consensus 6 ~~~~~~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~ 81 (460)
|+......||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.... .|+++..++..++..... ..+
T Consensus 12 ~~~~~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~ 90 (415)
T 3rsc_A 12 SGHIEGRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA-AGATVVPYQSEIIDADAAEVFGSDD 90 (415)
T ss_dssp -------CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCEEEECCCSTTTCCHHHHHHSSS
T ss_pred cCCcCcccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-cCCEEEeccccccccccchhhcccc
Confidence 334445668999999999999999999999999999999999998765544433 589999998655432110 001
Q ss_pred HHHHHHH-HHHhcchhHHHHHHHHhcccccccCCCeeEEEec-CCchhHHHHHHHcCCceEEEecccHHHHHHHHhcch-
Q 040486 82 LVALLSL-LNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITD-ATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPV- 158 (460)
Q Consensus 82 ~~~~~~~-~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~- 158 (460)
....+.. +.......+..+.+.+.+ ++||+||+| ...+++..+|+.+|||++.+.+..... ..+..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~~~~ 159 (415)
T 3rsc_A 91 LGVRPHLMYLRENVSVLRATAEALDG-------DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASN----EHYSFS 159 (415)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSS-------SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCC----SSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-------cCCCEEEECchhhhHHHHHHHHhCCCEEEEEeccccc----Cccccc
Confidence 1111222 222222333334344433 689999999 777889999999999999987542110 00000
Q ss_pred -hhccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHH------hhccc-ccEEEEcChhHhhHHHHHH
Q 040486 159 -LSQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEAT------NQMKV-SSGCIWNSLQDLELASLTK 230 (460)
Q Consensus 159 -~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~l~~~~~~l~~~~~~~ 230 (460)
.....+.. ..+.........+.+...+.. ..... .+..+....+.++++
T Consensus 160 ~~~~~~~~~-------------------~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~---- 216 (415)
T 3rsc_A 160 QDMVTLAGT-------------------IDPLDLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIA---- 216 (415)
T ss_dssp HHHHHHHTC-------------------CCGGGCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTT----
T ss_pred ccccccccc-------------------CChhhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCC----
Confidence 00000000 000000000011111111100 01111 256666666666643
Q ss_pred hhhcCCCCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEc
Q 040486 231 FHQDFPIPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVR 310 (460)
Q Consensus 231 ~~~~~~~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~ 310 (460)
...++.++.++||+..... +..+|....+++++|||++||......+.+..+++++++.+.+++|.++
T Consensus 217 -~~~~~~~~~~vGp~~~~~~-----------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g 284 (415)
T 3rsc_A 217 -GDTFDDRFVFVGPCFDDRR-----------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLG 284 (415)
T ss_dssp -GGGCCTTEEECCCCCCCCG-----------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECT
T ss_pred -cccCCCceEEeCCCCCCcc-----------cCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeC
Confidence 4444556899998875431 1345665556788999999999877778888999999999999999887
Q ss_pred CCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHH
Q 040486 311 PGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYV 390 (460)
Q Consensus 311 ~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v 390 (460)
.+... +.+..+++++ ++.+|+|+.++|+++++ +|||||+||+.|++++|+|+|++|...||+.||+++
T Consensus 285 ~~~~~--~~l~~~~~~v--------~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l 352 (415)
T 3rsc_A 285 GQVDP--AALGDLPPNV--------EAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRV 352 (415)
T ss_dssp TTSCG--GGGCCCCTTE--------EEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH
T ss_pred CCCCh--HHhcCCCCcE--------EEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHH
Confidence 54211 1133345555 89999999999999999 999999999999999999999999999999999999
Q ss_pred hhhhcceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 391 SDVWKVGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 391 ~~~~G~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
++. |+|..+.. +++.+.|.++|.++++| ++++++++++++.+. +.++..++++.+.+.+.+
T Consensus 353 ~~~-g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 353 DQL-GLGAVLPGEKADGDTLLAAVGAVAAD---PALLARVEAMRGHVR----RAGGAARAADAVEAYLAR 414 (415)
T ss_dssp HHH-TCEEECCGGGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHH----HSCHHHHHHHHHHHHHHH
T ss_pred HHc-CCEEEcccCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hcCHHHHHHHHHHHHhhc
Confidence 995 99999987 88999999999999999 999999999999998 578888888888887754
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3e-41 Score=331.07 Aligned_cols=376 Identities=18% Similarity=0.241 Sum_probs=263.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcc----cccccHHHHHH
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETE----ASTADLVALLS 87 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~ 87 (460)
|+||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.... .|+++..++..++... ....+....+.
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA-AGAEVVLYKSEFDTFHVPEVVKQEDAETQLH 80 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH-TTCEEEECCCGGGTSSSSSSSCCTTHHHHHH
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH-cCCEEEecccccccccccccccccchHHHHH
Confidence 456799999999999999999999999999999999998654444333 5899999875433211 11223333333
Q ss_pred H-HHHhcchhHHHHHHHHhcccccccCCCeeEEEec-CCchhHHHHHHHcCCceEEEecccHHHHHHHHhcch--hhccC
Q 040486 88 L-LNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITD-ATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPV--LSQKG 163 (460)
Q Consensus 88 ~-~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~--~~~~~ 163 (460)
. +.......+..+.+.+.+ ++||+||+| ....++..+|+.+|||++.+.+..... ..+.. .....
T Consensus 81 ~~~~~~~~~~~~~l~~~l~~-------~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~----~~~~~~~~~~~~ 149 (402)
T 3ia7_A 81 LVYVRENVAILRAAEEALGD-------NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAAN----EHYSLFKELWKS 149 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-------CCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCB----TTBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-------cCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccC----cccccccccccc
Confidence 3 333333334444444433 689999999 777889999999999999987542210 00000 00000
Q ss_pred CCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhh----------cccc-cEEEEcChhHhhHHHHHHhh
Q 040486 164 YFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQ----------MKVS-SGCIWNSLQDLELASLTKFH 232 (460)
Q Consensus 164 ~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~-~~~l~~~~~~l~~~~~~~~~ 232 (460)
... .. + .....+...+.+.... .... +..+....++++++ .
T Consensus 150 ~~~----~~----~---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~ 201 (402)
T 3ia7_A 150 NGQ----RH----P---------------ADVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPF-----A 201 (402)
T ss_dssp HTC----CC----G---------------GGSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTT-----G
T ss_pred ccc----cC----h---------------hhHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCc-----c
Confidence 000 00 0 0000011111111111 1111 55566666666543 3
Q ss_pred hcCCCCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCC
Q 040486 233 QDFPIPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPG 312 (460)
Q Consensus 233 ~~~~~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (460)
..++.++.++||+...... ..+|....+++++||+++||......+.+..++++++..+.+++|.++.+
T Consensus 202 ~~~~~~~~~vGp~~~~~~~-----------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 270 (402)
T 3ia7_A 202 ETFDERFAFVGPTLTGRDG-----------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGF 270 (402)
T ss_dssp GGCCTTEEECCCCCCC---------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTT
T ss_pred ccCCCCeEEeCCCCCCccc-----------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCc
Confidence 4445568999988654321 34566545678899999999987777788999999999999999988754
Q ss_pred ccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceecccc-ccchhhhHHHHh
Q 040486 313 LVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPC-FGDQMVNARYVS 391 (460)
Q Consensus 313 ~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~-~~DQ~~na~~v~ 391 (460)
... +.+..+++++ ++.+|+|+.++|+++++ +|||||.||+.|++++|+|+|++|. ..||..||++++
T Consensus 271 ~~~--~~~~~~~~~v--------~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~ 338 (402)
T 3ia7_A 271 LDP--AVLGPLPPNV--------EAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVI 338 (402)
T ss_dssp SCG--GGGCSCCTTE--------EEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHH
T ss_pred CCh--hhhCCCCCcE--------EEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHH
Confidence 211 1123344444 89999999999999999 9999999999999999999999999 999999999999
Q ss_pred hhhcceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 392 DVWKVGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 392 ~~~G~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
+. |+|..+.. +++.+.|.+++.++++| ++++++++++++++. +.++..++++.+.+.+.
T Consensus 339 ~~-g~g~~~~~~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 398 (402)
T 3ia7_A 339 EL-GLGSVLRPDQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGPARAADEVEAYLG 398 (402)
T ss_dssp HT-TSEEECCGGGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHHHHHHHHHHHHHH
T ss_pred Hc-CCEEEccCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChHHHHHHHHHHHHh
Confidence 95 99999987 88999999999999999 999999999999998 67888888888887765
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=9.2e-43 Score=343.22 Aligned_cols=374 Identities=11% Similarity=0.042 Sum_probs=252.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcccc--cccHHHHHHHHHHh
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETEAS--TADLVALLSLLNVQ 92 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 92 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.... .|++|+.++......... .......+..+..
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE-VGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLAA- 78 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-HTCCEEECSCCGGGCCCTTSCCCCHHHHHHHHH-
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cCCeeeecCCCHHHHHhhccccchhHHHHHHHH-
Confidence 799999999999999999999999999999999999754433333 489999988543211100 0111111111111
Q ss_pred cchhHHHHHHHHhcccccccCCCeeEEEecC-Cchh--HHHHHHHcCCceEEEecccHHHHHHHHhcchhhccCCCCCCC
Q 040486 93 CVVPFRNCLAKLLSNVEEEEKEPIACLITDA-TWYF--TQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPIRD 169 (460)
Q Consensus 93 ~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (460)
..+...++.+.+. . .+||+||+|. ..++ +..+|+.+|||++.+.+++.+. ...+.| ..
T Consensus 79 --~~~~~~~~~l~~~-~----~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~-----------~~~~~p-~~ 139 (416)
T 1rrv_A 79 --MTVEMQFDAVPGA-A----EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL-----------ASPHLP-PA 139 (416)
T ss_dssp --HHHHHHHHHHHHH-T----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CCSSSC-CC
T ss_pred --HHHHHHHHHHHHH-h----cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC-----------CCcccC-CC
Confidence 1223344444321 1 5899999997 4566 8899999999999988764221 001111 00
Q ss_pred CCCCccCCCCCCCCCCCCCCc-cc-ccchhHHHHHHHHH------------hhcccccEEEEcChhHhhHHHHHHhhhcC
Q 040486 170 SQSEAPVPELPPLRVKDIPVV-ET-CYRETLHRLVTEAT------------NQMKVSSGCIWNSLQDLELASLTKFHQDF 235 (460)
Q Consensus 170 ~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~~~~~~~~~~------------~~~~~~~~~l~~~~~~l~~~~~~~~~~~~ 235 (460)
.. .+.......+.+... .. .....+........ +..... .+++++++.|+++ ++.
T Consensus 140 --~~--~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-----~~~- 208 (416)
T 1rrv_A 140 --YD--EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-----QPD- 208 (416)
T ss_dssp --BC--SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC-----CSS-
T ss_pred --CC--CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC-----CCC-
Confidence 00 000000000000000 00 00000000111111 111222 5788999988753 221
Q ss_pred CCCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEcccccc-CCHHHHHHHHHHHHcCCCCEEEEEcCCcc
Q 040486 236 PIPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAA-INETEFLEVAWGLANSKVPFLWVVRPGLV 314 (460)
Q Consensus 236 ~~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~ 314 (460)
.+++++||+..+.. .+.+.++.+|++.. +++|||++||... ...+.+..+++++++.+++++|+++....
T Consensus 209 -~~~~~vG~~~~~~~------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~ 279 (416)
T 1rrv_A 209 -VDAVQTGAWLLSDE------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTEL 279 (416)
T ss_dssp -CCCEECCCCCCCCC------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTC
T ss_pred -CCeeeECCCccCcc------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCccc
Confidence 26899999986532 12334578898753 5789999999864 45677888999999999999999886532
Q ss_pred CCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhh
Q 040486 315 RGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVW 394 (460)
Q Consensus 315 ~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~ 394 (460)
. ...+|+++ ++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++ .
T Consensus 280 ~----~~~~~~~v--------~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~ 344 (416)
T 1rrv_A 280 V----LPDDRDDC--------FAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA-L 344 (416)
T ss_dssp C----CSCCCTTE--------EEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH-H
T ss_pred c----ccCCCCCE--------EEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH-C
Confidence 1 12244444 88999999999999999 99999999999999999999999999999999999999 5
Q ss_pred cceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 040486 395 KVGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESL 453 (460)
Q Consensus 395 G~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~ 453 (460)
|+|+.++. +++.+.|.++|+++ +| ++|++++++++++++ +.++. +.++.+
T Consensus 345 g~g~~~~~~~~~~~~l~~~i~~l-~~---~~~~~~~~~~~~~~~----~~~~~-~~~~~i 395 (416)
T 1rrv_A 345 GIGVAHDGPTPTFESLSAALTTV-LA---PETRARAEAVAGMVL----TDGAA-AAADLV 395 (416)
T ss_dssp TSEEECSSSCCCHHHHHHHHHHH-TS---HHHHHHHHHHTTTCC----CCHHH-HHHHHH
T ss_pred CCccCCCCCCCCHHHHHHHHHHh-hC---HHHHHHHHHHHHHHh----hcCcH-HHHHHH
Confidence 99999986 78999999999999 99 899999999999887 45555 666655
No 12
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.9e-41 Score=336.40 Aligned_cols=378 Identities=12% Similarity=0.118 Sum_probs=247.3
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcc-c------------
Q 040486 11 QKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETE-A------------ 77 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~------------ 77 (460)
...+|||+|++.++.||++|+++||++|+++||+|+|++++...+.+.. .|++|+.++....... .
T Consensus 17 ~~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~-~G~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 95 (441)
T 2yjn_A 17 RGSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA-AGLTAVPVGTDVDLVDFMTHAGHDIIDYVR 95 (441)
T ss_dssp --CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT-TTCCEEECSCCCCHHHHHHHTTHHHHHHHT
T ss_pred cCCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh-CCCceeecCCccchHHHhhhhhcccccccc
Confidence 4567999999999999999999999999999999999999765443333 5899999986431000 0
Q ss_pred --c-----cc--cHH---HHHHHHHHhcc-----h-hHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCce
Q 040486 78 --S-----TA--DLV---ALLSLLNVQCV-----V-PFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSR 139 (460)
Q Consensus 78 --~-----~~--~~~---~~~~~~~~~~~-----~-~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~ 139 (460)
. .. ... ..+..+...+. . .+.++++.+.+ ++||+||+|..++++..+|+.+|||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pDlVv~d~~~~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 96 SLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-------WRPDLVIWEPLTFAAPIAAAVTGTPH 168 (441)
T ss_dssp TCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-------HCCSEEEECTTCTHHHHHHHHHTCCE
T ss_pred cccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-------cCCCEEEecCcchhHHHHHHHcCCCE
Confidence 0 00 110 11111211111 2 44444444443 57999999998888999999999999
Q ss_pred EEEecccHHHHHHHHhcchhhccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHh-hc----ccccE
Q 040486 140 IVLRTNSVSSFLVFAAFPVLSQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATN-QM----KVSSG 214 (460)
Q Consensus 140 v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~----~~~~~ 214 (460)
+.+...+.........+.. ..++.|.. . ... ...+.+.+...+... .. ...+.
T Consensus 169 v~~~~~~~~~~~~~~~~~~--~~~~~~~~--~---------------~~~---~~~~~l~~~~~~~g~~~~~~~~~~~~~ 226 (441)
T 2yjn_A 169 ARLLWGPDITTRARQNFLG--LLPDQPEE--H---------------RED---PLAEWLTWTLEKYGGPAFDEEVVVGQW 226 (441)
T ss_dssp EEECSSCCHHHHHHHHHHH--HGGGSCTT--T---------------CCC---HHHHHHHHHHHHTTCCCCCGGGTSCSS
T ss_pred EEEecCCCcchhhhhhhhh--hccccccc--c---------------ccc---hHHHHHHHHHHHcCCCCCCccccCCCe
Confidence 9987654322111110000 01111100 0 000 011111222221111 00 01233
Q ss_pred EEEcChhHhhHHHHHHhhhcCC-CCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccC---CHHH
Q 040486 215 CIWNSLQDLELASLTKFHQDFP-IPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAI---NETE 290 (460)
Q Consensus 215 ~l~~~~~~l~~~~~~~~~~~~~-~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~---~~~~ 290 (460)
.+..+.+.++++ ..+. .++.++++ . .+.++.+|++..+++++|||++||.... ..+.
T Consensus 227 ~l~~~~~~~~~~------~~~~~~~~~~~~~---~----------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~ 287 (441)
T 2yjn_A 227 TIDPAPAAIRLD------TGLKTVGMRYVDY---N----------GPSVVPEWLHDEPERRRVCLTLGISSRENSIGQVS 287 (441)
T ss_dssp EEECSCGGGSCC------CCCCEEECCCCCC---C----------SSCCCCGGGSSCCSSCEEEEEC----------CCS
T ss_pred EEEecCccccCC------CCCCCCceeeeCC---C----------CCcccchHhhcCCCCCEEEEECCCCcccccChHHH
Confidence 444444444321 1111 12222211 1 1123668887656778999999998763 3456
Q ss_pred HHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhh
Q 040486 291 FLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICE 370 (460)
Q Consensus 291 ~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~ 370 (460)
+..+++++++.++++||++++..... +..+|+++ ++.+|+||.++|+.+++ ||||||+||++|++++
T Consensus 288 ~~~~~~al~~~~~~~v~~~g~~~~~~---l~~~~~~v--------~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~ 354 (441)
T 2yjn_A 288 IEELLGAVGDVDAEIIATFDAQQLEG---VANIPDNV--------RTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIH 354 (441)
T ss_dssp TTTTHHHHHTSSSEEEECCCTTTTSS---CSSCCSSE--------EECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEECCcchhh---hccCCCCE--------EEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHh
Confidence 67788999999999999988543211 22344444 89999999999999999 9999999999999999
Q ss_pred CCceeccccccchhhhHHHHhhhhcceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 040486 371 GVPMICQPCFGDQMVNARYVSDVWKVGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQS 449 (460)
Q Consensus 371 GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~ 449 (460)
|||+|++|...||+.||+++++ .|+|+.++. +++.+.|.++|.++++| ++++++++++++++. +..+..+.
T Consensus 355 G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~ 426 (441)
T 2yjn_A 355 GVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD---PAHRAGAARMRDDML----AEPSPAEV 426 (441)
T ss_dssp TCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHH
T ss_pred CCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH----cCCCHHHH
Confidence 9999999999999999999999 599999987 78999999999999999 999999999999998 67778888
Q ss_pred HHHHHHHHH
Q 040486 450 LESLISYIL 458 (460)
Q Consensus 450 ~~~~~~~~~ 458 (460)
++.+.+.+.
T Consensus 427 ~~~i~~~~~ 435 (441)
T 2yjn_A 427 VGICEELAA 435 (441)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776654
No 13
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.2e-41 Score=331.74 Aligned_cols=365 Identities=12% Similarity=0.040 Sum_probs=247.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcc-cccccHHHHHHHHHHhc
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETE-ASTADLVALLSLLNVQC 93 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 93 (460)
|||+|++.++.||++|+++||++|+++||+|+|++++...+.... .|++|..++....... ............+....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~-~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE-VGVPMVPVGRAVRAGAREPGELPPGAAEVVTEVV 79 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH-TTCCEEECSSCSSGGGSCTTCCCTTCGGGHHHHH
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH-cCCceeecCCCHHHHhccccCCHHHHHHHHHHHH
Confidence 899999999999999999999999999999999998755444443 5899999975432110 00000000001111111
Q ss_pred chhHHHHHHHHhcccccccCCCeeEEEecCCchhH---HHHHHHcCCceEEEecccHHHHHHHHhcchhhccCCCCCCCC
Q 040486 94 VVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFT---QAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPIRDS 170 (460)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 170 (460)
...++++. .+. .+||+||+|.....+ ..+|+.+|||++.+..++.... .+ .+
T Consensus 80 ~~~~~~l~-~~~--------~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~-------~~---~~------ 134 (404)
T 3h4t_A 80 AEWFDKVP-AAI--------EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLP-------SE---QS------ 134 (404)
T ss_dssp HHHHHHHH-HHH--------TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSG-------GG---SC------
T ss_pred HHHHHHHH-HHh--------cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCC-------Ch---hH------
Confidence 11122222 222 369999999765444 7899999999999877653200 00 00
Q ss_pred CCCccCCCCCCCCCCCCCC-cccccchhHHHHHHHHHhhc--c---------cccEEEEcChhHhhHHHHHHhhhcCCCC
Q 040486 171 QSEAPVPELPPLRVKDIPV-VETCYRETLHRLVTEATNQM--K---------VSSGCIWNSLQDLELASLTKFHQDFPIP 238 (460)
Q Consensus 171 ~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~--~---------~~~~~l~~~~~~l~~~~~~~~~~~~~~p 238 (460)
..... ........+.+.+.+....+ . ..+..+.+..+.+.+. +.+...
T Consensus 135 --------------~~~~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~------~~~~~~ 194 (404)
T 3h4t_A 135 --------------QAERDMYNQGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPL------RPTDLG 194 (404)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCC------CTTCCS
T ss_pred --------------HHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCC------CCCCCC
Confidence 00000 00000000000011000000 0 0122355666666432 112334
Q ss_pred ccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCc
Q 040486 239 MFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAE 318 (460)
Q Consensus 239 ~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~ 318 (460)
++++|++..+... +.+.++.+|++. ++++|||++||... ..+.+..+++++++.++++||++++.....
T Consensus 195 ~~~~G~~~~~~~~------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~-- 263 (404)
T 3h4t_A 195 TVQTGAWILPDQR------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGR-- 263 (404)
T ss_dssp CCBCCCCCCCCCC------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCC--
T ss_pred eEEeCccccCCCC------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccccc--
Confidence 8889987654322 233447788874 46899999999987 678888999999999999999988654211
Q ss_pred cCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhccee
Q 040486 319 WIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGL 398 (460)
Q Consensus 319 ~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~ 398 (460)
..+++++ ++.+|+||.++|+++++ ||||||+||+.|++++|+|+|++|+.+||+.||+++++ .|+|.
T Consensus 264 --~~~~~~v--------~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~ 330 (404)
T 3h4t_A 264 --IDEGDDC--------LVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGV 330 (404)
T ss_dssp --SSCCTTE--------EEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEE
T ss_pred --ccCCCCE--------EEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEe
Confidence 1234444 89999999999999999 99999999999999999999999999999999999999 59999
Q ss_pred eeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 399 HLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 399 ~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
.+.. +++.+.|.++|+++++ ++|+++++++++.+. . .+..++++.+.+.+.
T Consensus 331 ~l~~~~~~~~~l~~ai~~ll~----~~~~~~~~~~~~~~~----~-~~~~~~~~~i~~~~~ 382 (404)
T 3h4t_A 331 AHDGPTPTVESLSAALATALT----PGIRARAAAVAGTIR----T-DGTTVAAKLLLEAIS 382 (404)
T ss_dssp ECSSSSCCHHHHHHHHHHHTS----HHHHHHHHHHHTTCC----C-CHHHHHHHHHHHHHH
T ss_pred ccCcCCCCHHHHHHHHHHHhC----HHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHh
Confidence 9987 8899999999999996 479999999999987 5 677777777776654
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=5.2e-40 Score=325.17 Aligned_cols=381 Identities=15% Similarity=0.173 Sum_probs=253.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcccc----cccHHHHHH
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETEAS----TADLVALLS 87 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~~~~~~~ 87 (460)
|++|||+|++.++.||++|++.|+++|+++||+|++++++...+.... .|++++.++..++..... ..+....+.
T Consensus 5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (430)
T 2iyf_A 5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA-TGPRPVLYHSTLPGPDADPEAWGSTLLDNVE 83 (430)
T ss_dssp ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT-TSCEEEECCCCSCCTTSCGGGGCSSHHHHHH
T ss_pred cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh-CCCEEEEcCCcCccccccccccchhhHHHHH
Confidence 557899999999999999999999999999999999998765333333 589999988654322111 122223333
Q ss_pred HHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhccCCCCC
Q 040486 88 LLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPI 167 (460)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 167 (460)
.+...+...+..+.+.+.+ .+||+||+|...+++..+|+.+|||++.+.+.+............+..
T Consensus 84 ~~~~~~~~~~~~l~~~l~~-------~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~------ 150 (430)
T 2iyf_A 84 PFLNDAIQALPQLADAYAD-------DIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMW------ 150 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTT-------SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHH------
T ss_pred HHHHHHHHHHHHHHHHhhc-------cCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchh------
Confidence 2222222333333333332 589999999877889999999999999988653200000000000000
Q ss_pred CCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHH------HhhcccccEEEEcChhHhhHHHHHHhhhcCCCC-cc
Q 040486 168 RDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEA------TNQMKVSSGCIWNSLQDLELASLTKFHQDFPIP-MF 240 (460)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~p-~~ 240 (460)
.+..+. +.. ........+.+.+. .......+.+++++.+.++++ ...++.+ ++
T Consensus 151 ------~~~~~~--------~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~v~ 210 (430)
T 2iyf_A 151 ------REPRQT--------ERG-RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH-----ADRVDEDVYT 210 (430)
T ss_dssp ------HHHHHS--------HHH-HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----GGGSCTTTEE
T ss_pred ------hhhccc--------hHH-HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----cccCCCccEE
Confidence 000000 000 00000011111110 001114577888998888754 2334456 89
Q ss_pred ccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcC-CCCEEEEEcCCccCCCcc
Q 040486 241 PIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANS-KVPFLWVVRPGLVRGAEW 319 (460)
Q Consensus 241 ~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~ 319 (460)
++||....... ..+|....+++++||+++||......+.+..+++++++. +.+++|.++.+... +.
T Consensus 211 ~vG~~~~~~~~-----------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--~~ 277 (430)
T 2iyf_A 211 FVGACQGDRAE-----------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP--AE 277 (430)
T ss_dssp ECCCCC----------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CG--GG
T ss_pred EeCCcCCCCCC-----------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh--HH
Confidence 99986532110 234655445678999999999855678888899999886 78888888754311 11
Q ss_pred CCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceee
Q 040486 320 IEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLH 399 (460)
Q Consensus 320 ~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~ 399 (460)
+..++ +|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|..+||..|++++++ .|+|..
T Consensus 278 l~~~~--------~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~ 346 (430)
T 2iyf_A 278 LGELP--------DNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQG-LGVARK 346 (430)
T ss_dssp GCSCC--------TTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEE
T ss_pred hccCC--------CCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHH-cCCEEE
Confidence 22233 44589999999999999999 99999999999999999999999999999999999999 599999
Q ss_pred eCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 400 LER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 400 ~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+.. +++.+.|.++|.++++| +.++++++++++++.+ .++..+.++.+.+.+
T Consensus 347 ~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 398 (430)
T 2iyf_A 347 LATEEATADLLRETALALVDD---PEVARRLRRIQAEMAQ----EGGTRRAADLIEAEL 398 (430)
T ss_dssp CCCC-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH----HCHHHHHHHHHHTTS
T ss_pred cCCCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHh
Confidence 987 78999999999999999 8999999999998874 356666666665544
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.2e-39 Score=314.69 Aligned_cols=352 Identities=13% Similarity=0.098 Sum_probs=248.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcc-c---------c-cc-cH
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETE-A---------S-TA-DL 82 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~---------~-~~-~~ 82 (460)
|||++++.++.||++|+++|+++|+++||+|+|++++...+.... .|++++.++....... . . .. ..
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG-VGLPAVATTDLPIRHFITTDREGRPEAIPSDPVA 79 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCCEEESCSSCHHHHHHBCTTSCBCCCCCSHHH
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh-CCCEEEEeCCcchHHHHhhhcccCccccCcchHH
Confidence 799999999999999999999999999999999998754332222 5889998875321000 0 0 00 11
Q ss_pred HHHH-HH-HHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhcchhh
Q 040486 83 VALL-SL-LNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLS 160 (460)
Q Consensus 83 ~~~~-~~-~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 160 (460)
...+ .. +...+...+..+.+.+.+ .+||+||+|....++..+|+.+|||++.+...+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~------------ 140 (384)
T 2p6p_A 80 QARFTGRWFARMAASSLPRMLDFSRA-------WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD------------ 140 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhc-------cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc------------
Confidence 1111 11 111122223333333332 47999999988888889999999999987543100
Q ss_pred ccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhc-----ccccEEEEcChhHhhHHHHHHhhhcC
Q 040486 161 QKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQM-----KVSSGCIWNSLQDLELASLTKFHQDF 235 (460)
Q Consensus 161 ~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~~~~~~~~~~ 235 (460)
+ .. + .......+.+..... ...+.++.++.+.++++. + +
T Consensus 141 -----~----------~~--------~-------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~-~ 184 (384)
T 2p6p_A 141 -----A----------DG--------I-------HPGADAELRPELSELGLERLPAPDLFIDICPPSLRPAN-----A-A 184 (384)
T ss_dssp -----C----------TT--------T-------HHHHHHHTHHHHHHTTCSSCCCCSEEEECSCGGGSCTT-----S-C
T ss_pred -----c----------ch--------h-------hHHHHHHHHHHHHHcCCCCCCCCCeEEEECCHHHCCCC-----C-C
Confidence 0 00 0 000111111111111 115677888888886431 1 1
Q ss_pred C-CCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccC-----CHHHHHHHHHHHHcCCCCEEEEE
Q 040486 236 P-IPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAI-----NETEFLEVAWGLANSKVPFLWVV 309 (460)
Q Consensus 236 ~-~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~-----~~~~~~~~~~al~~~~~~~i~~~ 309 (460)
. .++.+++. . . +.++.+|++..+++++|||++||.... +.+.+..+++++++.+++++|++
T Consensus 185 ~~~~~~~~~~-~--~----------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~ 251 (384)
T 2p6p_A 185 PARMMRHVAT-S--R----------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAA 251 (384)
T ss_dssp CCEECCCCCC-C--C----------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEEC
T ss_pred CCCceEecCC-C--C----------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEe
Confidence 1 22444421 1 0 123567887645678999999998864 45778889999999999999988
Q ss_pred cCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHH
Q 040486 310 RPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARY 389 (460)
Q Consensus 310 ~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~ 389 (460)
++.. .+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||++
T Consensus 252 g~~~----------~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~ 317 (384)
T 2p6p_A 252 PDTV----------AEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARR 317 (384)
T ss_dssp CHHH----------HHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred CCCC----------HHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHH
Confidence 6421 1111 134567799 99999999999999 99999999999999999999999999999999999
Q ss_pred HhhhhcceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 390 VSDVWKVGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 390 v~~~~G~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+++ .|+|+.++. +++.+.|.++|+++++| +++++++++++++++ ...+.+++++.+.+++
T Consensus 318 ~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 318 VAD-YGAAIALLPGEDSTEAIADSCQELQAK---DTYARRAQDLSREIS----GMPLPATVVTALEQLA 378 (384)
T ss_dssp HHH-HTSEEECCTTCCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred HHH-CCCeEecCcCCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 999 599999987 78999999999999999 999999999999999 6778888888777665
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=5.5e-38 Score=307.42 Aligned_cols=353 Identities=13% Similarity=0.158 Sum_probs=240.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCc----------------
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSET---------------- 75 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------------- 75 (460)
..+|||+|++.++.||++|+++||++|.++||+|+++++ ...+.... .|+++..++......
T Consensus 18 ~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (398)
T 3oti_A 18 GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA-AGLEVVDVAPDYSAVKVFEQVAKDNPRFAET 95 (398)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT-TTCEEEESSTTCCHHHHHHHHHHHCHHHHHT
T ss_pred hhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh-CCCeeEecCCccCHHHHhhhcccCCcccccc
Confidence 346999999999999999999999999999999999998 44333333 589999997532100
Q ss_pred -----ccccccHHHHHHHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHH
Q 040486 76 -----EASTADLVALLSLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSF 150 (460)
Q Consensus 76 -----~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 150 (460)
..........+... ....+..+.+.+.+ ++||+||+|...+++..+|+.+|||++.+.......
T Consensus 96 ~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~-------~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~~- 164 (398)
T 3oti_A 96 VATRPAIDLEEWGVQIAAV---NRPLVDGTMALVDD-------YRPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWRT- 164 (398)
T ss_dssp GGGSCCCSGGGGHHHHHHH---HGGGHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCCC-
T ss_pred ccCChhhhHHHHHHHHHHH---HHHHHHHHHHHHHH-------cCCCEEEECchhhHHHHHHHHcCCCEEEEeccCCCc-
Confidence 00111111122222 22333333333333 479999999888889999999999999865431000
Q ss_pred HHHHhcchhhccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHH
Q 040486 151 LVFAAFPVLSQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTK 230 (460)
Q Consensus 151 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 230 (460)
... .......+.....+...........+....+.+..+
T Consensus 165 ------~~~-------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 203 (398)
T 3oti_A 165 ------RGM-------------------------------HRSIASFLTDLMDKHQVSLPEPVATIESFPPSLLLE---- 203 (398)
T ss_dssp ------TTH-------------------------------HHHHHTTCHHHHHHTTCCCCCCSEEECSSCGGGGTT----
T ss_pred ------cch-------------------------------hhHHHHHHHHHHHHcCCCCCCCCeEEEeCCHHHCCC----
Confidence 000 000000011111111111122244444444444321
Q ss_pred hhhcCCCCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccC--CHHHHHHHHHHHHcCCCCEEEE
Q 040486 231 FHQDFPIPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAI--NETEFLEVAWGLANSKVPFLWV 308 (460)
Q Consensus 231 ~~~~~~~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--~~~~~~~~~~al~~~~~~~i~~ 308 (460)
......++.++ |. . ....+.+|+...+++++||+++||.... ..+.+..+++++++.+.+++|+
T Consensus 204 -~~~~~~~~~~~-~~--~----------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~ 269 (398)
T 3oti_A 204 -AEPEGWFMRWV-PY--G----------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLA 269 (398)
T ss_dssp -SCCCSBCCCCC-CC--C----------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEE
T ss_pred -CCCCCCCcccc-CC--C----------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEE
Confidence 00001122222 11 0 1123456776556788999999998653 5677888999999999999999
Q ss_pred EcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhH-
Q 040486 309 VRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNA- 387 (460)
Q Consensus 309 ~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na- 387 (460)
.++... +.+..+++++ ++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||..||
T Consensus 270 ~g~~~~---~~l~~~~~~v--------~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~ 336 (398)
T 3oti_A 270 LGDLDI---SPLGTLPRNV--------RAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTA 336 (398)
T ss_dssp CTTSCC---GGGCSCCTTE--------EEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTT
T ss_pred ECCcCh---hhhccCCCcE--------EEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHH
Confidence 877531 1133455555 89999999999999999 999999999999999999999999999999999
Q ss_pred -HHHhhhhcceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 388 -RYVSDVWKVGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 388 -~~v~~~~G~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
.++++ .|+|..++. +.+.+.|. ++++| ++++++++++++++. +..+..+.++.+.+.+
T Consensus 337 ~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 337 REAVSR-RGIGLVSTSDKVDADLLR----RLIGD---ESLRTAAREVREEMV----ALPTPAETVRRIVERI 396 (398)
T ss_dssp HHHHHH-HTSEEECCGGGCCHHHHH----HHHHC---HHHHHHHHHHHHHHH----TSCCHHHHHHHHHHHH
T ss_pred HHHHHH-CCCEEeeCCCCCCHHHHH----HHHcC---HHHHHHHHHHHHHHH----hCCCHHHHHHHHHHHh
Confidence 99999 599999987 77888877 88899 999999999999998 6777777777776654
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.5e-38 Score=311.42 Aligned_cols=354 Identities=14% Similarity=0.142 Sum_probs=224.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCc-----------ccccc
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSET-----------EASTA 80 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~ 80 (460)
..+|||+|++.++.||++|+++|+++|+++||+|++++++...+.... .|+.+..++...... .....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG-AGLPFAPTCPSLDMPEVLSWDREGNRTTMPR 91 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH-TTCCEEEEESSCCHHHHHSBCTTSCBCCCCS
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh-CCCeeEecCCccchHhhhhhhccCccccccc
Confidence 457999999999999999999999999999999999998644333333 588888886321100 00000
Q ss_pred cHHH---HH-HHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHHHhc
Q 040486 81 DLVA---LL-SLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAF 156 (460)
Q Consensus 81 ~~~~---~~-~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~ 156 (460)
+... .. ..+.......+..+.+.+.+ ++||+|++|...+++..+|+.+|||++.+..........
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~~---- 160 (398)
T 4fzr_A 92 EEKPLLEHIGRGYGRLVLRMRDEALALAER-------WKPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPELI---- 160 (398)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHHH----
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCCCEEEECccccHHHHHHHhhCCCEEEeccCCCCchhh----
Confidence 1111 11 11112222222233333332 579999999888889999999999999876552110000
Q ss_pred chhhccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhh-----cccccEEEEcChhHhhHHHHHHh
Q 040486 157 PVLSQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQ-----MKVSSGCIWNSLQDLELASLTKF 231 (460)
Q Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~l~~~~~~~~ 231 (460)
.....+.+...... ....+..+....+.+..+.
T Consensus 161 --------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 198 (398)
T 4fzr_A 161 --------------------------------------KSAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEAQP---- 198 (398)
T ss_dssp --------------------------------------HHHHHHHTHHHHHTTTCSSCCCCSEEEECSCGGGC-------
T ss_pred --------------------------------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEeCChhhCCCC----
Confidence 00000111111111 1122444555555554431
Q ss_pred hhcCCCCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccC--------CHHHHHHHHHHHHcCCC
Q 040486 232 HQDFPIPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAI--------NETEFLEVAWGLANSKV 303 (460)
Q Consensus 232 ~~~~~~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~--------~~~~~~~~~~al~~~~~ 303 (460)
.....++.++++.. ...++.+|+...+++++||+++||.... ..+.+..+++++.+.+.
T Consensus 199 -~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 265 (398)
T 4fzr_A 199 -KPGTTKMRYVPYNG------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGF 265 (398)
T ss_dssp --CCCEECCCCCCCC------------SSCCCCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTC
T ss_pred -CCCCCCeeeeCCCC------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCC
Confidence 00011233332210 1122456765545778999999998752 34567889999999999
Q ss_pred CEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccch
Q 040486 304 PFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQ 383 (460)
Q Consensus 304 ~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ 383 (460)
+++|+.++..... +..+++++ ++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||
T Consensus 266 ~~v~~~~~~~~~~---l~~~~~~v--------~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q 332 (398)
T 4fzr_A 266 EVVVAVSDKLAQT---LQPLPEGV--------LAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEV 332 (398)
T ss_dssp EEEECCCC-----------CCTTE--------EEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGG
T ss_pred EEEEEeCCcchhh---hccCCCcE--------EEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhH
Confidence 9999887653111 23344444 89999999999999999 99999999999999999999999999999
Q ss_pred hhhHHHHhhhhcceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 040486 384 MVNARYVSDVWKVGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESL 453 (460)
Q Consensus 384 ~~na~~v~~~~G~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~ 453 (460)
+.|+.++++. |+|..++. +++.+.|.++|.++|+| +++++++++.++++. +..+..+.++.+
T Consensus 333 ~~~a~~~~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~l 395 (398)
T 4fzr_A 333 WDSARLLHAA-GAGVEVPWEQAGVESVLAACARIRDD---SSYVGNARRLAAEMA----TLPTPADIVRLI 395 (398)
T ss_dssp HHHHHHHHHT-TSEEECC-------CHHHHHHHHHHC---THHHHHHHHHHHHHT----TSCCHHHHHHHH
T ss_pred HHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHH----cCCCHHHHHHHH
Confidence 9999999995 99999987 78999999999999999 899999999999998 556655555444
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=8.6e-36 Score=291.19 Aligned_cols=356 Identities=14% Similarity=0.170 Sum_probs=238.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEec-CCCCC--Cc--------c-----c
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSI-EDSLS--ET--------E-----A 77 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~-~~~~~--~~--------~-----~ 77 (460)
+|||+|++.++.||++|+++|+++|.++||+|++++++...+.... .|+++..+ +.... .. . .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG-AGLTTAGIRGNDRTGDTGGTTQLRFPNPAFGQR 79 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH-BTCEEEEC--------------CCSCCGGGGCT
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh-CCCceeeecCCccchhhhhhhcccccccccccc
Confidence 4999999999999999999999999999999999998643332222 58888888 32110 00 0 0
Q ss_pred ccccHHHHHHHHHHhc----chhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHH
Q 040486 78 STADLVALLSLLNVQC----VVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVF 153 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~----~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 153 (460)
........+....... ...+.++.+.+.+ ++||+||+|...+.+..+|+.+|||++.+.........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~~-- 150 (391)
T 3tsa_A 80 DTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-------WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPTAG-- 150 (391)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCTTT--
T ss_pred cchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-------cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCCccccc--
Confidence 0011111122211111 0012233333332 57999999987888889999999999997644210000
Q ss_pred HhcchhhccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhc-----ccccEEEEcChhHhhHHHH
Q 040486 154 AAFPVLSQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQM-----KVSSGCIWNSLQDLELASL 228 (460)
Q Consensus 154 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~l~~~~~ 228 (460)
.......+++......+ ...+..+....++++..
T Consensus 151 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 189 (391)
T 3tsa_A 151 ---------------------------------------PFSDRAHELLDPVCRHHGLTGLPTPELILDPCPPSLQAS-- 189 (391)
T ss_dssp ---------------------------------------HHHHHHHHHHHHHHHHTTSSSSCCCSEEEECSCGGGSCT--
T ss_pred ---------------------------------------cccchHHHHHHHHHHHcCCCCCCCCceEEEecChhhcCC--
Confidence 00111122222222211 11244455555554432
Q ss_pred HHhhhcCCCCccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEcccccc--CC-HHHHHHHHHHHHcC-CCC
Q 040486 229 TKFHQDFPIPMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAA--IN-ETEFLEVAWGLANS-KVP 304 (460)
Q Consensus 229 ~~~~~~~~~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~--~~-~~~~~~~~~al~~~-~~~ 304 (460)
......++.++ |+. ....+..|+...+++++|++++||... .. .+.+..++++ ++. +++
T Consensus 190 ---~~~~~~~~~~~-p~~------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~ 252 (391)
T 3tsa_A 190 ---DAPQGAPVQYV-PYN------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVE 252 (391)
T ss_dssp ---TSCCCEECCCC-CCC------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEE
T ss_pred ---CCCccCCeeee-cCC------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeE
Confidence 11011123333 111 112245677655678999999999854 33 6778888888 887 788
Q ss_pred EEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchh
Q 040486 305 FLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQM 384 (460)
Q Consensus 305 ~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~ 384 (460)
++|..++.... .+..+++++ ++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+
T Consensus 253 ~v~~~~~~~~~---~l~~~~~~v--------~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~ 319 (391)
T 3tsa_A 253 AVIAVPPEHRA---LLTDLPDNA--------RIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQF 319 (391)
T ss_dssp EEEECCGGGGG---GCTTCCTTE--------EECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHH
T ss_pred EEEEECCcchh---hcccCCCCE--------EEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHH
Confidence 88888764311 133344444 88999999999999999 999999999999999999999999999999
Q ss_pred hhHHHHhhhhcceeeeCC---ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 385 VNARYVSDVWKVGLHLER---KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 385 ~na~~v~~~~G~g~~~~~---~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
.|+.++++. |+|..+.. +.+.+.|.+++.++++| ++++++++++++.+. +..+..+.++.+.+.+.
T Consensus 320 ~~a~~~~~~-g~g~~~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 320 DYARNLAAA-GAGICLPDEQAQSDHEQFTDSIATVLGD---TGFAAAAIKLSDEIT----AMPHPAALVRTLENTAA 388 (391)
T ss_dssp HHHHHHHHT-TSEEECCSHHHHTCHHHHHHHHHHHHTC---THHHHHHHHHHHHHH----TSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHc-CCEEecCcccccCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHH----cCCCHHHHHHHHHHHHh
Confidence 999999995 99999875 47899999999999999 899999999999998 67788887777766543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=3.2e-34 Score=282.02 Aligned_cols=363 Identities=16% Similarity=0.180 Sum_probs=244.9
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcc------------cc
Q 040486 11 QKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETE------------AS 78 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------------~~ 78 (460)
+..+|||+|++.++.||++|+++|+++|+++||+|++++++...+.... .|+++..++..+.... ..
T Consensus 17 ~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (412)
T 3otg_A 17 EGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK-LGFEPVATGMPVFDGFLAALRIRFDTDSPE 95 (412)
T ss_dssp -CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH-TTCEEEECCCCHHHHHHHHHHHHHSCSCCT
T ss_pred ccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh-cCCceeecCcccccchhhhhhhhhcccCCc
Confidence 3557999999999999999999999999999999999998643222222 5899998874110000 00
Q ss_pred cccHHHH----HHHHHHh-cchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecccHHHHHHH
Q 040486 79 TADLVAL----LSLLNVQ-CVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNSVSSFLVF 153 (460)
Q Consensus 79 ~~~~~~~----~~~~~~~-~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~ 153 (460)
....... ...+... ....+..+.+.+.+ ++||+||+|....++..+|+.+|||++.+........
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-------~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~~--- 165 (412)
T 3otg_A 96 GLTPEQLSELPQIVFGRVIPQRVFDELQPVIER-------LRPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTPD--- 165 (412)
T ss_dssp TCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCCS---
T ss_pred cCChhHhhHHHHHHHhccchHHHHHHHHHHHHh-------cCCCEEEECchhhHHHHHHHHcCCCEEEecccccCch---
Confidence 0001111 1111111 01112222222322 4799999998778788999999999998654421000
Q ss_pred HhcchhhccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhh----------cccccEEEEcChhHh
Q 040486 154 AAFPVLSQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQ----------MKVSSGCIWNSLQDL 223 (460)
Q Consensus 154 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~~~l 223 (460)
.......+.+.+.... ...++.++..+.+.+
T Consensus 166 ---------------------------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~ 206 (412)
T 3otg_A 166 ---------------------------------------DLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSL 206 (412)
T ss_dssp ---------------------------------------HHHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGG
T ss_pred ---------------------------------------hhhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHh
Confidence 0000111111111111 123445566555555
Q ss_pred hHHHHHHhhhcCCCCccccCCCCcCCCCCCcccccCccccccc-cCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCC
Q 040486 224 ELASLTKFHQDFPIPMFPIGPFHKFFSASSSSLLAHDQTSISW-LDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSK 302 (460)
Q Consensus 224 ~~~~~~~~~~~~~~p~~~vG~l~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~ 302 (460)
+...-..... ..|+.++++- ......+| ....+++++|++++||......+.+..+++++++.+
T Consensus 207 ~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~ 271 (412)
T 3otg_A 207 QEPEFRARPR--RHELRPVPFA-------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLD 271 (412)
T ss_dssp SCHHHHTCTT--EEECCCCCCC-------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSS
T ss_pred cCCcccCCCC--cceeeccCCC-------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCC
Confidence 5331000000 1122222211 11123456 222356789999999997666788889999999989
Q ss_pred CCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccc
Q 040486 303 VPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGD 382 (460)
Q Consensus 303 ~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~D 382 (460)
.+++|..++.... +.+..+++++ .+.+|+|+.++|+++|+ ||+|||.||+.||+++|+|+|++|...|
T Consensus 272 ~~~~~~~g~~~~~--~~l~~~~~~v--------~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~ 339 (412)
T 3otg_A 272 ADVLVASGPSLDV--SGLGEVPANV--------RLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGD 339 (412)
T ss_dssp SEEEEECCSSCCC--TTCCCCCTTE--------EEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred CEEEEEECCCCCh--hhhccCCCcE--------EEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchh
Confidence 9999998765411 1133445555 88999999999999999 9999999999999999999999999999
Q ss_pred hhhhHHHHhhhhcceeeeCC-ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 383 QMVNARYVSDVWKVGLHLER-KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 383 Q~~na~~v~~~~G~g~~~~~-~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
|..|+.++++. |+|..+.. +.+++.|.++|.++++| +.+++++.+.++++. +..+..+.++.+.+.+.
T Consensus 340 q~~~~~~v~~~-g~g~~~~~~~~~~~~l~~ai~~ll~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 408 (412)
T 3otg_A 340 SFANAQAVAQA-GAGDHLLPDNISPDSVSGAAKRLLAE---ESYRAGARAVAAEIA----AMPGPDEVVRLLPGFAS 408 (412)
T ss_dssp HHHHHHHHHHH-TSEEECCGGGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----HSCCHHHHHTTHHHHHC
T ss_pred HHHHHHHHHHc-CCEEecCcccCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHh----cCCCHHHHHHHHHHHhc
Confidence 99999999995 99999987 78999999999999999 999999999999988 56788888887777664
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=2.7e-29 Score=241.96 Aligned_cols=305 Identities=14% Similarity=0.097 Sum_probs=192.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC--CCCCCCCeeEEecCC-CCCCcc--cccccHHHHHHHH
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSP--NPSNYPHFTFCSIED-SLSETE--ASTADLVALLSLL 89 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~--~~~~~~g~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 89 (460)
.||++...|+-||++|.++||++|.++||+|+|++++...+ ...+ .|++++.++. +++... .....+..++..+
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~-~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 81 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK-AGLPLHLIQVSGLRGKGLKSLVKAPLELLKSL 81 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG-GTCCEEECC--------------CHHHHHHHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh-cCCcEEEEECCCcCCCCHHHHHHHHHHHHHHH
Confidence 68999988888999999999999999999999999875443 2333 5889888873 222111 0111111211111
Q ss_pred HHhcchhHHHHHHHHhcccccccCCCeeEEEecCCc--hhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhccCCCCC
Q 040486 90 NVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATW--YFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPI 167 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~ 167 (460)
.....-+.+ .+||+||++..+ ..+..+|+.+|||++..-..
T Consensus 82 --------~~~~~~l~~-------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n---------------------- 124 (365)
T 3s2u_A 82 --------FQALRVIRQ-------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN---------------------- 124 (365)
T ss_dssp --------HHHHHHHHH-------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS----------------------
T ss_pred --------HHHHHHHHh-------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc----------------------
Confidence 112222222 479999999755 44567899999999974221
Q ss_pred CCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcCCCCccccCCCCc
Q 040486 168 RDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDFPIPMFPIGPFHK 247 (460)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~p~~~vG~l~~ 247 (460)
.+++ . ..+++ .+.++.++ .++++..+. .....++|....
T Consensus 125 -------~~~G---------------~---~nr~l------~~~a~~v~-~~~~~~~~~---------~~k~~~~g~pvr 163 (365)
T 3s2u_A 125 -------AVAG---------------T---ANRSL------APIARRVC-EAFPDTFPA---------SDKRLTTGNPVR 163 (365)
T ss_dssp -------SSCC---------------H---HHHHH------GGGCSEEE-ESSTTSSCC------------CEECCCCCC
T ss_pred -------hhhh---------------h---HHHhh------ccccceee-ecccccccC---------cCcEEEECCCCc
Confidence 0010 0 01111 12233333 344332110 223566665543
Q ss_pred CCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCC----CCEEEEEcCCccCCCccCCCC
Q 040486 248 FFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSK----VPFLWVVRPGLVRGAEWIEPL 323 (460)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~~l 323 (460)
.... .. -..+....+++++|+|..||.... ...+.+.++++.+. ..++|+++.... +.+
T Consensus 164 ~~~~-------~~--~~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~------~~~ 226 (365)
T 3s2u_A 164 GELF-------LD--AHARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHA------EIT 226 (365)
T ss_dssp GGGC-------CC--TTSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTH------HHH
T ss_pred hhhc-------cc--hhhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCcccc------ccc
Confidence 3211 01 011222234677899999987652 33344667776643 456777664421 111
Q ss_pred chhHHhhcCCCCccccccChh-hhhccCCCcccccccCchhHHHHHhhCCceeccccc----cchhhhHHHHhhhhccee
Q 040486 324 PQGFLETLDGRGHMVKWAPQQ-EVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCF----GDQMVNARYVSDVWKVGL 398 (460)
Q Consensus 324 p~~~~~~~~~~~~v~~~vp~~-~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G~g~ 398 (460)
.+. ....+.++.+.+|++++ ++++.+|+ +|||+|.+|+.|++++|+|+|++|+. .+|..||+.+++. |+|.
T Consensus 227 ~~~-~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~ 302 (365)
T 3s2u_A 227 AER-YRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGR 302 (365)
T ss_dssp HHH-HHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEE
T ss_pred cce-ecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEE
Confidence 111 12344567888999986 79999999 99999999999999999999999974 5899999999995 9999
Q ss_pred eeCC-ccCHHHHHHHHHHHhcc
Q 040486 399 HLER-KLERGEVERTIRRVMTE 419 (460)
Q Consensus 399 ~~~~-~~~~~~l~~~i~~ll~~ 419 (460)
.++. +++++.|.++|.++++|
T Consensus 303 ~l~~~~~~~~~L~~~i~~ll~d 324 (365)
T 3s2u_A 303 LLPQKSTGAAELAAQLSEVLMH 324 (365)
T ss_dssp ECCTTTCCHHHHHHHHHHHHHC
T ss_pred EeecCCCCHHHHHHHHHHHHCC
Confidence 9987 89999999999999999
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.7e-27 Score=204.10 Aligned_cols=158 Identities=22% Similarity=0.381 Sum_probs=134.5
Q ss_pred ccccccccCCCCCCeEEEEEcccccc-CCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccc
Q 040486 260 DQTSISWLDKQTPKSVIYVSFGSIAA-INETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMV 338 (460)
Q Consensus 260 ~~~l~~~l~~~~~~~~v~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~ 338 (460)
+.++.+|++..+++++|||++||... ...+.+..+++++++.+++++|+.++.. ...+++++ ++.
T Consensus 8 ~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~------~~~~~~~v--------~~~ 73 (170)
T 2o6l_A 8 PKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK------PDTLGLNT--------RLY 73 (170)
T ss_dssp CHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC------CTTCCTTE--------EEE
T ss_pred CHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC------cccCCCcE--------EEe
Confidence 34588999876677899999999864 5678888999999988999999987643 12244454 889
Q ss_pred cccChhhhh--ccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCC-ccCHHHHHHHHHH
Q 040486 339 KWAPQQEVL--AHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLER-KLERGEVERTIRR 415 (460)
Q Consensus 339 ~~vp~~~~l--~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~-~~~~~~l~~~i~~ 415 (460)
+|+||.+++ +.+++ ||||||+||++||+++|+|+|++|...||..||+++++ .|+|+.++. +++.+.|.++|.+
T Consensus 74 ~~~~~~~~l~~~~ad~--~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ 150 (170)
T 2o6l_A 74 KWIPQNDLLGHPKTRA--FITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKR 150 (170)
T ss_dssp SSCCHHHHHTSTTEEE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHH
T ss_pred cCCCHHHHhcCCCcCE--EEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHH
Confidence 999999999 55666 99999999999999999999999999999999999999 599999987 7899999999999
Q ss_pred HhccchHHHHHHHHHHHHHHHH
Q 040486 416 VMTEAEGQEIRVRIMILKEKLN 437 (460)
Q Consensus 416 ll~~~~~~~~~~~a~~~~~~~~ 437 (460)
+++| +.|+++++++++.++
T Consensus 151 ll~~---~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 151 VIND---PSYKENVMKLSRIQH 169 (170)
T ss_dssp HHHC---HHHHHHHHHHC----
T ss_pred HHcC---HHHHHHHHHHHHHhh
Confidence 9999 899999999999886
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=9.1e-21 Score=182.73 Aligned_cols=337 Identities=15% Similarity=0.103 Sum_probs=205.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC--CCCCCCCeeEEecCCC-CCCcccccccHHHHHHHHHH
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSP--NPSNYPHFTFCSIEDS-LSETEASTADLVALLSLLNV 91 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~--~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 91 (460)
|||++++.+..||..+++.|+++|.++||+|++++...... .... .|++++.++.. +... .....+.....
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~-----~~~~~~~~~~~ 80 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK-HGIEIDFIRISGLRGK-----GIKALIAAPLR 80 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG-GTCEEEECCCCCCTTC-----CHHHHHTCHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc-cCCceEEecCCccCcC-----ccHHHHHHHHH
Confidence 89999998777999999999999999999999999864321 1121 37888877532 2111 11111110000
Q ss_pred hcchhHHHHHHHHhcccccccCCCeeEEEecCCc--hhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhccCCCCCCC
Q 040486 92 QCVVPFRNCLAKLLSNVEEEEKEPIACLITDATW--YFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGYFPIRD 169 (460)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 169 (460)
. ...+..+.+.+.+ .+||+|+++... ..+..+++.+|+|++....... +
T Consensus 81 ~-~~~~~~l~~~l~~-------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~------------------~--- 131 (364)
T 1f0k_A 81 I-FNAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI------------------A--- 131 (364)
T ss_dssp H-HHHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS------------------C---
T ss_pred H-HHHHHHHHHHHHh-------cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC------------------C---
Confidence 0 0112222222322 479999998643 4456788899999986432210 0
Q ss_pred CCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcCCCCccccCCCCcCC
Q 040486 170 SQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDFPIPMFPIGPFHKFF 249 (460)
Q Consensus 170 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~p~~~vG~l~~~~ 249 (460)
+ ...++ ..+.++.++..+... ++ ++..+|......
T Consensus 132 --------~------------------~~~~~------~~~~~d~v~~~~~~~------------~~-~~~~i~n~v~~~ 166 (364)
T 1f0k_A 132 --------G------------------LTNKW------LAKIATKVMQAFPGA------------FP-NAEVVGNPVRTD 166 (364)
T ss_dssp --------C------------------HHHHH------HTTTCSEEEESSTTS------------SS-SCEECCCCCCHH
T ss_pred --------c------------------HHHHH------HHHhCCEEEecChhh------------cC-CceEeCCccchh
Confidence 0 00011 123445555443221 11 344555322211
Q ss_pred CCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcC--CCCEEEEEcCCccCCCccCCCCchhH
Q 040486 250 SASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANS--KVPFLWVVRPGLVRGAEWIEPLPQGF 327 (460)
Q Consensus 250 ~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~lp~~~ 327 (460)
. ..... ..+.+...+++++|++..|+... ......++++++.+ +.++++.++.+.. ..+.+-+
T Consensus 167 ~------~~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~------~~l~~~~ 231 (364)
T 1f0k_A 167 V------LALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQ------QSVEQAY 231 (364)
T ss_dssp H------HTSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCH------HHHHHHH
T ss_pred h------cccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchH------HHHHHHH
Confidence 0 00000 11112222345678878888653 44445566666654 4565666665420 0111111
Q ss_pred HhhcC-CCCccccccCh-hhhhccCCCcccccccCchhHHHHHhhCCceeccccc---cchhhhHHHHhhhhcceeeeCC
Q 040486 328 LETLD-GRGHMVKWAPQ-QEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCF---GDQMVNARYVSDVWKVGLHLER 402 (460)
Q Consensus 328 ~~~~~-~~~~v~~~vp~-~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~---~DQ~~na~~v~~~~G~g~~~~~ 402 (460)
+... +++.+.+|+++ .++++.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..++.
T Consensus 232 -~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~ 307 (364)
T 1f0k_A 232 -AEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQ 307 (364)
T ss_dssp -HHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCG
T ss_pred -hhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecc
Confidence 1122 46788899955 689999999 99999999999999999999999987 7999999999995 99998887
Q ss_pred -ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 403 -KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 403 -~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
+++.+.|.++|.++ | +..+++..+-+++.. +..+.++.++.+.+.+++
T Consensus 308 ~d~~~~~la~~i~~l--~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~~ 356 (364)
T 1f0k_A 308 PQLSVDAVANTLAGW--S---RETLLTMAERARAAS----IPDATERVANEVSRVARA 356 (364)
T ss_dssp GGCCHHHHHHHHHTC--C---HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHhc--C---HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHHH
Confidence 67799999999988 6 555555444444433 456677778888877765
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.64 E-value=2.4e-15 Score=137.49 Aligned_cols=116 Identities=9% Similarity=0.044 Sum_probs=88.7
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhc--CCCCccccccChh-hhhc
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETL--DGRGHMVKWAPQQ-EVLA 348 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~vp~~-~~l~ 348 (460)
+.+.|+|++|... .......+++++.+.. ++.++++.+. ...+.+.+.. ..|+.+..|++++ ++++
T Consensus 156 ~~~~ILv~~GG~d--~~~l~~~vl~~L~~~~-~i~vv~G~~~--------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTD--IKNLSLQIASELPKTK-IISIATSSSN--------PNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCC--TTCHHHHHHHHSCTTS-CEEEEECTTC--------TTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCc--hhhHHHHHHHHhhcCC-CEEEEECCCc--------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 4568999999754 3345566788887654 5666665442 1223332221 2467888999987 6999
Q ss_pred cCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCC
Q 040486 349 HPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLER 402 (460)
Q Consensus 349 ~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 402 (460)
.+|+ +||+|| +|++|+++.|+|+|++|...+|..||+.+++. |++..+..
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 9999 999999 89999999999999999999999999999995 99998865
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.64 E-value=3.2e-16 Score=137.37 Aligned_cols=138 Identities=12% Similarity=0.020 Sum_probs=97.2
Q ss_pred CCCeEEEEEccccccCCHHHHHHH-----HHHHHcCC-CCEEEEEcCCccCCCc----cC-----CC-CchhH-------
Q 040486 271 TPKSVIYVSFGSIAAINETEFLEV-----AWGLANSK-VPFLWVVRPGLVRGAE----WI-----EP-LPQGF------- 327 (460)
Q Consensus 271 ~~~~~v~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~----~~-----~~-lp~~~------- 327 (460)
.++++|||+.||... -.+.+..+ ++++.+.+ .+++++++.......+ .. .. +|.+.
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~ 104 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTA 104 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCTTCSC
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccccccc
Confidence 467899999999742 34444444 48888887 7899999876421000 00 00 11000
Q ss_pred H----hhcCCCCccccccChh-hhhc-cCCCcccccccCchhHHHHHhhCCceeccccc----cchhhhHHHHhhhhcce
Q 040486 328 L----ETLDGRGHMVKWAPQQ-EVLA-HPATGGFWTHCGWNSTLESICEGVPMICQPCF----GDQMVNARYVSDVWKVG 397 (460)
Q Consensus 328 ~----~~~~~~~~v~~~vp~~-~~l~-~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~----~DQ~~na~~v~~~~G~g 397 (460)
. ....-++.+.+|++++ ++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++++. |++
T Consensus 105 ~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~~ 181 (224)
T 2jzc_A 105 RQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GYV 181 (224)
T ss_dssp EEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SCC
T ss_pred cccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CCE
Confidence 0 0000123456888886 7999 9999 99999999999999999999999984 4699999999994 998
Q ss_pred eeeCCccCHHHHHHHHHHH
Q 040486 398 LHLERKLERGEVERTIRRV 416 (460)
Q Consensus 398 ~~~~~~~~~~~l~~~i~~l 416 (460)
+.+ +.+.|.++|.++
T Consensus 182 ~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 182 WSC----APTETGLIAGLR 196 (224)
T ss_dssp CEE----CSCTTTHHHHHH
T ss_pred EEc----CHHHHHHHHHHH
Confidence 765 567777778777
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.46 E-value=4.2e-11 Score=117.91 Aligned_cols=367 Identities=10% Similarity=0.035 Sum_probs=184.7
Q ss_pred CCCcEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC---CCCCCeeEEecCCCCCCccc
Q 040486 12 KKGRRLILFPL-----------PLQGHINPMLQLANILYSKGFSITIIHTNFNSPNP---SNYPHFTFCSIEDSLSETEA 77 (460)
Q Consensus 12 ~~~~~vl~~~~-----------~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~ 77 (460)
.++|||++++. ..-|+-..+..|+++|.++||+|++++........ ....|++++.++.......
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~- 96 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPYEGL- 96 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEEEEETTEEEEEECCSCSSSC-
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccccccCCeEEEEecCCCcccc-
Confidence 56899999985 23477788999999999999999999875432111 1114788877763211110
Q ss_pred ccccHHHHHHHHHHhcchhHHHHHHH-HhcccccccCCCeeEEEecCCc--hhHHHHHHHcCCceEEEecccHHHHHHHH
Q 040486 78 STADLVALLSLLNVQCVVPFRNCLAK-LLSNVEEEEKEPIACLITDATW--YFTQAVAESLKLSRIVLRTNSVSSFLVFA 154 (460)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~l~~-l~~~~~~~~~~kpD~VI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 154 (460)
...+....+..+ ...++.. +... .+||+|++.... ..+..+++.+++|+|......... .
T Consensus 97 ~~~~~~~~~~~~-------~~~~~~~~~~~~------~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----~ 159 (438)
T 3c48_A 97 SKEELPTQLAAF-------TGGMLSFTRREK------VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAV----K 159 (438)
T ss_dssp CGGGGGGGHHHH-------HHHHHHHHHHHT------CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHH----H
T ss_pred chhHHHHHHHHH-------HHHHHHHHHhcc------CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccc----c
Confidence 011111111111 1112222 1111 249999987532 234457788899998865543210 0
Q ss_pred hcchhhccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhc
Q 040486 155 AFPVLSQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQD 234 (460)
Q Consensus 155 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~ 234 (460)
....... . .......... ....+..++.++..+....+. +.+.
T Consensus 160 -------~~~~~~~-----------------~------~~~~~~~~~~--~~~~~~~~d~ii~~s~~~~~~-----~~~~ 202 (438)
T 3c48_A 160 -------NSYRDDS-----------------D------TPESEARRIC--EQQLVDNADVLAVNTQEEMQD-----LMHH 202 (438)
T ss_dssp -------SCC---------------------C------CHHHHHHHHH--HHHHHHHCSEEEESSHHHHHH-----HHHH
T ss_pred -------ccccccc-----------------C------CcchHHHHHH--HHHHHhcCCEEEEcCHHHHHH-----HHHH
Confidence 0000000 0 0000001111 122345678888877554432 1221
Q ss_pred CCC---CccccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcC-----CCCE-
Q 040486 235 FPI---PMFPIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANS-----KVPF- 305 (460)
Q Consensus 235 ~~~---p~~~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~- 305 (460)
++. ++..|..-.....-.. ........+.+-+.- +++..+++..|+... .+....+++++..+ +..+
T Consensus 203 ~g~~~~k~~vi~ngvd~~~~~~-~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~p~~~~~ 278 (438)
T 3c48_A 203 YDADPDRISVVSPGADVELYSP-GNDRATERSRRELGI-PLHTKVVAFVGRLQP--FKGPQVLIKAVAALFDRDPDRNLR 278 (438)
T ss_dssp HCCCGGGEEECCCCCCTTTSCC-C----CHHHHHHTTC-CSSSEEEEEESCBSG--GGCHHHHHHHHHHHHHHCTTCSEE
T ss_pred hCCChhheEEecCCccccccCC-cccchhhhhHHhcCC-CCCCcEEEEEeeecc--cCCHHHHHHHHHHHHhhCCCcceE
Confidence 221 2444443222111000 000000001222221 123345667787654 23333344444432 1233
Q ss_pred EEEEcCCccCCCccCCCCchhHHh---h--cCCCCccccccChh---hhhccCCCccccccc----CchhHHHHHhhCCc
Q 040486 306 LWVVRPGLVRGAEWIEPLPQGFLE---T--LDGRGHMVKWAPQQ---EVLAHPATGGFWTHC----GWNSTLESICEGVP 373 (460)
Q Consensus 306 i~~~~~~~~~~~~~~~~lp~~~~~---~--~~~~~~v~~~vp~~---~~l~~~~~~~~I~Hg----G~gs~~eal~~GvP 373 (460)
++.++..... +...+.+.+ . ..+++.+.+++|+. ++++.+++ +|.-. ...++.||+++|+|
T Consensus 279 l~i~G~~~~~-----g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~P 351 (438)
T 3c48_A 279 VIICGGPSGP-----NATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTP 351 (438)
T ss_dssp EEEECCBC-----------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCC
T ss_pred EEEEeCCCCC-----CcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCC
Confidence 2334431100 001122211 1 23567888999864 58889999 77543 34689999999999
Q ss_pred eeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 040486 374 MICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAE-GQEIRVRIMILKEKLNLCLIQGGSSYQSLES 452 (460)
Q Consensus 374 ~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~ 452 (460)
+|+.+ .......+++. +.|..++. -+.++|.++|.++++|.+ ...+.+++++..+.+. .++.+++
T Consensus 352 vI~~~----~~~~~e~i~~~-~~g~~~~~-~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s--------~~~~~~~ 417 (438)
T 3c48_A 352 VIAAR----VGGLPIAVAEG-ETGLLVDG-HSPHAWADALATLLDDDETRIRMGEDAVEHARTFS--------WAATAAQ 417 (438)
T ss_dssp EEEES----CTTHHHHSCBT-TTEEEESS-CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred EEecC----CCChhHHhhCC-CcEEECCC-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC--------HHHHHHH
Confidence 99854 34566677774 78887765 578999999999999833 3344444444444432 4555555
Q ss_pred HHHHHH
Q 040486 453 LISYIL 458 (460)
Q Consensus 453 ~~~~~~ 458 (460)
+++.++
T Consensus 418 ~~~~~~ 423 (438)
T 3c48_A 418 LSSLYN 423 (438)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.43 E-value=5.9e-12 Score=122.04 Aligned_cols=344 Identities=12% Similarity=0.023 Sum_probs=184.1
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC---CCCCCCCeeEEecCCCCCCcccccccHHH
Q 040486 12 KKGRRLILFPL--P--LQGHINPMLQLANILYSKGFSITIIHTNFNSP---NPSNYPHFTFCSIEDSLSETEASTADLVA 84 (460)
Q Consensus 12 ~~~~~vl~~~~--~--~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (460)
+.+|||++++. + ..|.-.-+..+++.| +||+|++++...... ......++....++...... ..
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-- 72 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSVMLP-----TP-- 72 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHTTCSSEEEEESSSSCCS-----CH--
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhccccceEEEEcccccccc-----ch--
Confidence 46799999974 3 357778889999999 799999998864332 11122478888776432111 00
Q ss_pred HHHHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCc--hhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhcc
Q 040486 85 LLSLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATW--YFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQK 162 (460)
Q Consensus 85 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 162 (460)
..+..+.+.+.+ .+||+|++.... .....+++.+++|.+++....... ..
T Consensus 73 ----------~~~~~l~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~---~~-------- 124 (394)
T 3okp_A 73 ----------TTAHAMAEIIRE-------REIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEV---GW-------- 124 (394)
T ss_dssp ----------HHHHHHHHHHHH-------TTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHH---HH--------
T ss_pred ----------hhHHHHHHHHHh-------cCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchh---hh--------
Confidence 011112222222 479999986544 344567889999966544432111 00
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcCC--CCcc
Q 040486 163 GYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDFP--IPMF 240 (460)
Q Consensus 163 ~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--~p~~ 240 (460)
.......... ...++.++.++..+....+. +.+.+. .++.
T Consensus 125 ------------------------------~~~~~~~~~~---~~~~~~~d~ii~~s~~~~~~-----~~~~~~~~~~~~ 166 (394)
T 3okp_A 125 ------------------------------SMLPGSRQSL---RKIGTEVDVLTYISQYTLRR-----FKSAFGSHPTFE 166 (394)
T ss_dssp ------------------------------TTSHHHHHHH---HHHHHHCSEEEESCHHHHHH-----HHHHHCSSSEEE
T ss_pred ------------------------------hhcchhhHHH---HHHHHhCCEEEEcCHHHHHH-----HHHhcCCCCCeE
Confidence 0000011111 22335677878777544332 122222 2344
Q ss_pred ccCCCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcC-----CCCEEEEEcCCccC
Q 040486 241 PIGPFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANS-----KVPFLWVVRPGLVR 315 (460)
Q Consensus 241 ~vG~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~ 315 (460)
.+..-.....-.. ........+.+.+.. +++..+++..|+... .+....++++++.+ +.++++. +.+.
T Consensus 167 vi~ngv~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~~l~i~-G~g~-- 239 (394)
T 3okp_A 167 HLPSGVDVKRFTP-ATPEDKSATRKKLGF-TDTTPVIACNSRLVP--RKGQDSLIKAMPQVIAARPDAQLLIV-GSGR-- 239 (394)
T ss_dssp ECCCCBCTTTSCC-CCHHHHHHHHHHTTC-CTTCCEEEEESCSCG--GGCHHHHHHHHHHHHHHSTTCEEEEE-CCCT--
T ss_pred EecCCcCHHHcCC-CCchhhHHHHHhcCC-CcCceEEEEEecccc--ccCHHHHHHHHHHHHhhCCCeEEEEE-cCch--
Confidence 4443222111000 000011112222222 233345667787643 23334444554432 4454443 3221
Q ss_pred CCccCCCCchhHH---hhcCCCCccccccChh---hhhccCCCccccc-----------ccCchhHHHHHhhCCceeccc
Q 040486 316 GAEWIEPLPQGFL---ETLDGRGHMVKWAPQQ---EVLAHPATGGFWT-----------HCGWNSTLESICEGVPMICQP 378 (460)
Q Consensus 316 ~~~~~~~lp~~~~---~~~~~~~~v~~~vp~~---~~l~~~~~~~~I~-----------HgG~gs~~eal~~GvP~v~~P 378 (460)
..+.+. ....+++.+.+++|+. ++++.+++ +|. -|.-+++.||+++|+|+|+.+
T Consensus 240 -------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~ 310 (394)
T 3okp_A 240 -------YESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGT 310 (394)
T ss_dssp -------THHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECS
T ss_pred -------HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeC
Confidence 112221 1223566888999865 47889999 775 455679999999999999966
Q ss_pred cccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 379 CFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 379 ~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
.. .....+.+ |.|..++. -+.+++.++|.++++| +..+++..+ ..++...+.-+.++.++++.+.++
T Consensus 311 ~~----~~~e~i~~--~~g~~~~~-~d~~~l~~~i~~l~~~---~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~~ 377 (394)
T 3okp_A 311 SG----GAPETVTP--ATGLVVEG-SDVDKLSELLIELLDD---PIRRAAMGA---AGRAHVEAEWSWEIMGERLTNILQ 377 (394)
T ss_dssp ST----TGGGGCCT--TTEEECCT-TCHHHHHHHHHHHHTC---HHHHHHHHH---HHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred CC----ChHHHHhc--CCceEeCC-CCHHHHHHHHHHHHhC---HHHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 43 33344444 57776665 5799999999999998 433332222 222211234457778888888776
Q ss_pred c
Q 040486 459 S 459 (460)
Q Consensus 459 ~ 459 (460)
+
T Consensus 378 ~ 378 (394)
T 3okp_A 378 S 378 (394)
T ss_dssp S
T ss_pred H
Confidence 5
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.40 E-value=8.3e-11 Score=115.57 Aligned_cols=381 Identities=11% Similarity=0.039 Sum_probs=188.5
Q ss_pred CcEEEEEcCC----C-ccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC-------------------CCCCeeEEecC
Q 040486 14 GRRLILFPLP----L-QGHINPMLQLANILYSKGFSITIIHTNFNSPNPS-------------------NYPHFTFCSIE 69 (460)
Q Consensus 14 ~~~vl~~~~~----~-~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~-------------------~~~g~~~~~~~ 69 (460)
+|||++++.. . -|--.-+..|+++|+++||+|+++++........ ...|+.++.++
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~~ 81 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG 81 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEec
Confidence 6999999732 3 3445568899999999999999999754332211 22477777765
Q ss_pred CCCCCcccccccHHHH-HHHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCc--hhHHHHHHHcCCceEEEeccc
Q 040486 70 DSLSETEASTADLVAL-LSLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATW--YFTQAVAESLKLSRIVLRTNS 146 (460)
Q Consensus 70 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~--~~~~~~A~~lgiP~v~~~~~~ 146 (460)
..+............. ...+ ......+...+..+.... .+||+|.+.... ..+..+++..++|+|......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~ 155 (439)
T 3fro_A 82 GGLLDSEDVYGPGWDGLIRKA-VTFGRASVLLLNDLLREE-----PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRL 155 (439)
T ss_dssp SGGGGCSSTTCSHHHHHHHHH-HHHHHHHHHHHHHHTTTS-----CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCC
T ss_pred chhccccccccCCcchhhhhh-HHHHHHHHHHHHHHhccC-----CCCeEEEecchhhhhhHHHHhhccCCCEEEEeccc
Confidence 4111000000101111 1111 111122333444442211 589999987643 334567788999998865542
Q ss_pred HHHHHHHHhcchh-hccCCCCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhH
Q 040486 147 VSSFLVFAAFPVL-SQKGYFPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLEL 225 (460)
Q Consensus 147 ~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 225 (460)
... ..+.. .... ....+.. ...... ....+..++.++..|....+.
T Consensus 156 ~~~-----~~~~~~~~~~-------------------~~~~~~~---~~~~~~------~~~~~~~ad~ii~~S~~~~~~ 202 (439)
T 3fro_A 156 NKS-----KLPAFYFHEA-------------------GLSELAP---YPDIDP------EHTGGYIADIVTTVSRGYLID 202 (439)
T ss_dssp CCC-----CEEHHHHHHT-------------------TCGGGCC---SSEECH------HHHHHHHCSEEEESCHHHHHH
T ss_pred ccc-----cCchHHhCcc-------------------ccccccc---cceeeH------hhhhhhhccEEEecCHHHHHH
Confidence 100 00000 0000 0000000 000001 112234567777777654443
Q ss_pred HHHHHhhhcCCCCccccCCCCcCCCCCCcc----cccCccccccccCCCCCCeEEEEEccccc-c-CCHHHHHHHHHHHH
Q 040486 226 ASLTKFHQDFPIPMFPIGPFHKFFSASSSS----LLAHDQTSISWLDKQTPKSVIYVSFGSIA-A-INETEFLEVAWGLA 299 (460)
Q Consensus 226 ~~~~~~~~~~~~p~~~vG~l~~~~~~~~~~----~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~-~-~~~~~~~~~~~al~ 299 (460)
....+.. ...++..|..-.....-.... .......+.+-+.- +++ .+++..|+.. . ...+.+-..+..+.
T Consensus 203 -~~~~~~~-~~~~i~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~l~ 278 (439)
T 3fro_A 203 -EWGFFRN-FEGKITYVFNGIDCSFWNESYLTGSRDERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEILS 278 (439)
T ss_dssp -THHHHGG-GTTSEEECCCCCCTTTSCGGGSCSCHHHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHHHH
T ss_pred -Hhhhhhh-cCCceeecCCCCCchhcCcccccchhhhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHHHH
Confidence 1111100 123333333222111000000 00011112222222 233 5667788876 3 33444333344443
Q ss_pred cC----CCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChh---hhhccCCCcccccc----cCchhHHHHH
Q 040486 300 NS----KVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQ---EVLAHPATGGFWTH----CGWNSTLESI 368 (460)
Q Consensus 300 ~~----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~---~~l~~~~~~~~I~H----gG~gs~~eal 368 (460)
.. +.++++ ++.+.. . ....-....+..++++.+.+|+|+. +++..+++ +|.- |--.++.||+
T Consensus 279 ~~~~~~~~~l~i-~G~g~~-~---~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAm 351 (439)
T 3fro_A 279 SKKEFQEMRFII-IGKGDP-E---LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAM 351 (439)
T ss_dssp TSGGGGGEEEEE-ECCCCH-H---HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHH
T ss_pred hcccCCCeEEEE-EcCCCh-h---HHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHH
Confidence 32 333333 332210 0 0000011122333334556889985 47889998 6632 3347999999
Q ss_pred hhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhc-cch-HHHHHHHHHHHHHHHHHHHhcCCCh
Q 040486 369 CEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMT-EAE-GQEIRVRIMILKEKLNLCLIQGGSS 446 (460)
Q Consensus 369 ~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~~~~~~~~~~~~~g~~ 446 (460)
++|+|+|+.. .......+++ |.|..++. -+.+++.++|.++++ |.+ ...+.+++++..+ .-+.
T Consensus 352 a~G~Pvi~s~----~~~~~e~~~~--~~g~~~~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~--------~~s~ 416 (439)
T 3fro_A 352 CLGAIPIASA----VGGLRDIITN--ETGILVKA-GDPGELANAILKALELSRSDLSKFRENCKKRAM--------SFSW 416 (439)
T ss_dssp HTTCEEEEES----STHHHHHCCT--TTCEEECT-TCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHH--------TSCH
T ss_pred HCCCCeEEcC----CCCcceeEEc--CceEEeCC-CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh--------hCcH
Confidence 9999999854 3445555554 68887776 588999999999998 632 3344444443332 3557
Q ss_pred HHHHHHHHHHHHc
Q 040486 447 YQSLESLISYILS 459 (460)
Q Consensus 447 ~~~~~~~~~~~~~ 459 (460)
++.++++++.+++
T Consensus 417 ~~~~~~~~~~~~~ 429 (439)
T 3fro_A 417 EKSAERYVKAYTG 429 (439)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 7788888887765
No 28
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.36 E-value=5.4e-12 Score=122.54 Aligned_cols=160 Identities=9% Similarity=0.066 Sum_probs=98.2
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcC-----CCCEEEEEcCCccCCCccCCCCchhHHhh--cCCCCccccccCh-
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANS-----KVPFLWVVRPGLVRGAEWIEPLPQGFLET--LDGRGHMVKWAPQ- 343 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~~vp~- 343 (460)
++++++++.|...... +.+..+++++..+ +.++++..+.+.. +-+.+.+. ..+++++.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~--------~~~~l~~~~~~~~~v~l~~~l~~~ 293 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNPA--------VREKAMAILGGHERIHLIEPLDAI 293 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCHH--------HHHHHHHHhCCCCCEEEeCCCCHH
Confidence 4567777766422211 1245566665542 4566665543210 11112211 1246678888874
Q ss_pred --hhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccch
Q 040486 344 --QEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAE 421 (460)
Q Consensus 344 --~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~ 421 (460)
..+++.+++ +|+-+|..+ .||++.|+|+|++|-.++++. +.+. |.|..+.. +.+.|.+++.++++|
T Consensus 294 ~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~--d~~~l~~ai~~ll~~-- 361 (403)
T 3ot5_A 294 DFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIGT--NKENLIKEALDLLDN-- 361 (403)
T ss_dssp HHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcCC--CHHHHHHHHHHHHcC--
Confidence 368899999 998875333 799999999999976666554 2354 88876654 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 422 GQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+..+++..+-+..+ ..++++++.++.+.+++
T Consensus 362 -~~~~~~m~~~~~~~----g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 362 -KESHDKMAQAANPY----GDGFAANRILAAIKSHF 392 (403)
T ss_dssp -HHHHHHHHHSCCTT----CCSCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHhhcCcc----cCCcHHHHHHHHHHHHh
Confidence 55554433222222 25666666666665554
No 29
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.36 E-value=1.9e-10 Score=111.94 Aligned_cols=113 Identities=6% Similarity=0.087 Sum_probs=78.5
Q ss_pred CCCCccccccChh---hhhccCCCccccc----ccCc-hhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCc
Q 040486 332 DGRGHMVKWAPQQ---EVLAHPATGGFWT----HCGW-NSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERK 403 (460)
Q Consensus 332 ~~~~~v~~~vp~~---~~l~~~~~~~~I~----HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~ 403 (460)
.+++.+.+++++. +++..+++ +|. +.|. +++.||+++|+|+|+.+. ......+.+. +.|..++.
T Consensus 262 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~- 333 (406)
T 2gek_A 262 AGHLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV- 333 (406)
T ss_dssp GGGEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT-
T ss_pred cCcEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC-
Confidence 3566888999975 68899999 663 3344 499999999999998654 5566777774 77877765
Q ss_pred cCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 404 LERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 404 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
-+.+++.++|.++++| +..+++..+ ..++... .-+.++.++++.+.+++
T Consensus 334 ~d~~~l~~~i~~l~~~---~~~~~~~~~---~~~~~~~-~~s~~~~~~~~~~~~~~ 382 (406)
T 2gek_A 334 DDADGMAAALIGILED---DQLRAGYVA---RASERVH-RYDWSVVSAQIMRVYET 382 (406)
T ss_dssp TCHHHHHHHHHHHHHC---HHHHHHHHH---HHHHHGG-GGBHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcC---HHHHHHHHH---HHHHHHH-hCCHHHHHHHHHHHHHH
Confidence 5789999999999998 544333322 2222222 34556666666666553
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.35 E-value=1.3e-11 Score=118.91 Aligned_cols=158 Identities=12% Similarity=0.093 Sum_probs=95.3
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcC-----CCCEEEEEcCCccCCCccCCCCchhHHhhc--CCCCccccccCh-
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANS-----KVPFLWVVRPGLVRGAEWIEPLPQGFLETL--DGRGHMVKWAPQ- 343 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~vp~- 343 (460)
++++|+++.|...... .+..+++|++.+ +.++++..+.+.. +-+.+.+.. .+++++.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~--------~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV--------VREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH--------HHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH--------HHHHHHHHhccCCCEEEECCCCHH
Confidence 3456777777553221 345566666542 3455544443210 112222211 246677766665
Q ss_pred --hhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccch
Q 040486 344 --QEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAE 421 (460)
Q Consensus 344 --~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~ 421 (460)
.++++.+|+ ||+.+| |.+.||+++|+|+|+.+..+++... .+. |.|..++ .+.+.|.+++.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~--~d~~~la~~i~~ll~d-- 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LKA-GILKLAG--TDPEGVYRVVKGLLEN-- 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HHH-TSEEECC--SCHHHHHHHHHHHHTC--
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hcC-CceEECC--CCHHHHHHHHHHHHhC--
Confidence 479999999 999884 5566999999999998876666652 454 8887775 3899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 040486 422 GQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISY 456 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~ 456 (460)
+..+++..+.++.+ ..+++..+.++.+.+.
T Consensus 335 -~~~~~~~~~~~~~~----~~~~~~~~i~~~i~~~ 364 (376)
T 1v4v_A 335 -PEELSRMRKAKNPY----GDGKAGLMVARGVAWR 364 (376)
T ss_dssp -HHHHHHHHHSCCSS----CCSCHHHHHHHHHHHH
T ss_pred -hHhhhhhcccCCCC----CCChHHHHHHHHHHHH
Confidence 54444333221112 2344455555554443
No 31
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.34 E-value=1e-09 Score=106.38 Aligned_cols=347 Identities=13% Similarity=0.061 Sum_probs=175.3
Q ss_pred CcEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCC-CCCcccccccHHHHHHHHHH
Q 040486 14 GRRLILFPLPLQ-GHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDS-LSETEASTADLVALLSLLNV 91 (460)
Q Consensus 14 ~~~vl~~~~~~~-GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 91 (460)
+.++....+|.. |.-.-...|+++|.++||+|++++............++.+..++.. ++. ...... .+..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~---~~~~--- 87 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNKVYPNIYFHEVTVNQYSV-FQYPPY---DLAL--- 87 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----CCCTTEEEECCCCC-----CCSCCH---HHHH---
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccccCCceEEEecccccccc-cccccc---cHHH---
Confidence 477777777765 5667788999999999999999988543222222357777766421 111 000000 0000
Q ss_pred hcchhHHHHHHHHhcccccccCCCeeEEEecCCch--hHHHHHHH-c--CCceEEEecccHHHHHHHHhcchhhccCCCC
Q 040486 92 QCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWY--FTQAVAES-L--KLSRIVLRTNSVSSFLVFAAFPVLSQKGYFP 166 (460)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~--~~~~~A~~-l--giP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 166 (460)
...+...+.+ .+||+|++..... ....++.. + ++|++........ .. ....
T Consensus 88 --~~~l~~~l~~----------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~-----~~------~~~~- 143 (394)
T 2jjm_A 88 --ASKMAEVAQR----------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI-----TV------LGSD- 143 (394)
T ss_dssp --HHHHHHHHHH----------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH-----HT------TTTC-
T ss_pred --HHHHHHHHHH----------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc-----cc------cCCC-
Confidence 0112222222 3699999875332 22334443 3 5998875544211 00 0000
Q ss_pred CCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcCC--CCccccCC
Q 040486 167 IRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDFP--IPMFPIGP 244 (460)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~--~p~~~vG~ 244 (460)
.. ..... ...++.++.++..+....+. +.+.+. .++..+..
T Consensus 144 --------------------------~~---~~~~~---~~~~~~ad~ii~~s~~~~~~-----~~~~~~~~~~~~vi~n 186 (394)
T 2jjm_A 144 --------------------------PS---LNNLI---RFGIEQSDVVTAVSHSLINE-----THELVKPNKDIQTVYN 186 (394)
T ss_dssp --------------------------TT---THHHH---HHHHHHSSEEEESCHHHHHH-----HHHHTCCSSCEEECCC
T ss_pred --------------------------HH---HHHHH---HHHHhhCCEEEECCHHHHHH-----HHHhhCCcccEEEecC
Confidence 00 01111 11234677777776543332 222222 23444443
Q ss_pred CCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcC----CCCEEEEEcCCccCCCccC
Q 040486 245 FHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANS----KVPFLWVVRPGLVRGAEWI 320 (460)
Q Consensus 245 l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~~~ 320 (460)
-...... .......+.+-+.. +++..+++..|.... ......++++++.+ +.++ +.++.+.
T Consensus 187 gv~~~~~----~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l-~i~G~g~------- 251 (394)
T 2jjm_A 187 FIDERVY----FKRDMTQLKKEYGI-SESEKILIHISNFRK--VKRVQDVVQAFAKIVTEVDAKL-LLVGDGP------- 251 (394)
T ss_dssp CCCTTTC----CCCCCHHHHHHTTC-C---CEEEEECCCCG--GGTHHHHHHHHHHHHHSSCCEE-EEECCCT-------
T ss_pred CccHHhc----CCcchHHHHHHcCC-CCCCeEEEEeecccc--ccCHHHHHHHHHHHHhhCCCEE-EEECCch-------
Confidence 2221110 00011111222221 122345556777653 23334445554442 4444 3344321
Q ss_pred CCCchhHHhh---c--CCCCccccccCh-hhhhccCCCcccc----cccCchhHHHHHhhCCceeccccccchhhhHHHH
Q 040486 321 EPLPQGFLET---L--DGRGHMVKWAPQ-QEVLAHPATGGFW----THCGWNSTLESICEGVPMICQPCFGDQMVNARYV 390 (460)
Q Consensus 321 ~~lp~~~~~~---~--~~~~~v~~~vp~-~~~l~~~~~~~~I----~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v 390 (460)
..+.+.+. . .+++.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+.+.. .....+
T Consensus 252 --~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v 323 (394)
T 2jjm_A 252 --EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI 323 (394)
T ss_dssp --THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC
T ss_pred --HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh
Confidence 11222111 1 245577777654 479999999 77 456667999999999999986643 344556
Q ss_pred hhhhcceeeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 391 SDVWKVGLHLERKLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 391 ~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
++. +.|..++. -+.+++.++|.++++| +..+++. ++..++...+.-+.++.++++++.+++
T Consensus 324 ~~~-~~g~~~~~-~d~~~la~~i~~l~~~---~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~~ 384 (394)
T 2jjm_A 324 QHG-DTGYLCEV-GDTTGVADQAIQLLKD---EELHRNM---GERARESVYEQFRSEKIVSQYETIYYD 384 (394)
T ss_dssp CBT-TTEEEECT-TCHHHHHHHHHHHHHC---HHHHHHH---HHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred hcC-CceEEeCC-CCHHHHHHHHHHHHcC---HHHHHHH---HHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 663 67877765 5789999999999998 4433222 222222111345566777777777664
No 32
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.33 E-value=2.5e-12 Score=124.69 Aligned_cols=134 Identities=10% Similarity=0.067 Sum_probs=84.8
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcC-----CCCEEEEEcCCccCCCccCCCCchhHHhh--cCCCCccccccCh-
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANS-----KVPFLWVVRPGLVRGAEWIEPLPQGFLET--LDGRGHMVKWAPQ- 343 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~--~~~~~~v~~~vp~- 343 (460)
++++++++.+-..... ..+..+++|+..+ +.++++.++.+. . +-+.+.+. ..+++++.+++++
T Consensus 229 ~~~~vlv~~hR~~~~~-~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~--~------~~~~l~~~~~~~~~v~~~~~lg~~ 299 (396)
T 3dzc_A 229 SKKLILVTGHRRESFG-GGFERICQALITTAEQHPECQILYPVHLNP--N------VREPVNKLLKGVSNIVLIEPQQYL 299 (396)
T ss_dssp TSEEEEEECSCBCCCT-THHHHHHHHHHHHHHHCTTEEEEEECCBCH--H------HHHHHHHHTTTCTTEEEECCCCHH
T ss_pred CCCEEEEEECCcccch-hHHHHHHHHHHHHHHhCCCceEEEEeCCCh--H------HHHHHHHHHcCCCCEEEeCCCCHH
Confidence 4677777753222221 2245677776653 455666554321 0 11122221 1246677777754
Q ss_pred --hhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccch
Q 040486 344 --QEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAE 421 (460)
Q Consensus 344 --~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~ 421 (460)
..+++.+++ +|+-+| |.+.||+++|+|+|+..-.++++. +.+. |.+..+.. +.+.|.+++.++++|
T Consensus 300 ~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~~-G~~~lv~~--d~~~l~~ai~~ll~d-- 367 (396)
T 3dzc_A 300 PFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVAA-GTVKLVGT--NQQQICDALSLLLTD-- 367 (396)
T ss_dssp HHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHHH-TSEEECTT--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHHc-CceEEcCC--CHHHHHHHHHHHHcC--
Confidence 468899999 999988 666899999999999865555532 3453 87755543 789999999999999
Q ss_pred HHHHHH
Q 040486 422 GQEIRV 427 (460)
Q Consensus 422 ~~~~~~ 427 (460)
+..++
T Consensus 368 -~~~~~ 372 (396)
T 3dzc_A 368 -PQAYQ 372 (396)
T ss_dssp -HHHHH
T ss_pred -HHHHH
Confidence 55544
No 33
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.29 E-value=5.2e-10 Score=112.11 Aligned_cols=167 Identities=12% Similarity=0.079 Sum_probs=97.9
Q ss_pred EEEEEccccccCCHHHHHHHHHHHHcCCC----C-EEEEEcCCccCCCccCCCC-------chhHHh-----hcCCCCcc
Q 040486 275 VIYVSFGSIAAINETEFLEVAWGLANSKV----P-FLWVVRPGLVRGAEWIEPL-------PQGFLE-----TLDGRGHM 337 (460)
Q Consensus 275 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~l-------p~~~~~-----~~~~~~~v 337 (460)
.+++..|.... .+....+++|+..+.. . .++.++...... +.+..+ -+.+.+ ...+++.+
T Consensus 263 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~-~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~ 339 (499)
T 2r60_A 263 PAIIASSRLDQ--KKNHYGLVEAYVQNKELQDKANLVLTLRGIENPF-EDYSRAGQEEKEILGKIIELIDNNDCRGKVSM 339 (499)
T ss_dssp CEEEECSCCCG--GGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTT-TBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEE
T ss_pred cEEEEeecCcc--ccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcc-cccccccccchHHHHHHHHHHHhcCCCceEEE
Confidence 35567787653 4555667788877632 2 345555421100 000001 112221 12356788
Q ss_pred ccccChh---hhhccC----CCccccccc---C-chhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCH
Q 040486 338 VKWAPQQ---EVLAHP----ATGGFWTHC---G-WNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLER 406 (460)
Q Consensus 338 ~~~vp~~---~~l~~~----~~~~~I~Hg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~ 406 (460)
.+++|+. ++++.+ ++ +|.-. | -.++.||+++|+|+|+.. -......+.+. ..|..++. -+.
T Consensus 340 ~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~g~l~~~-~d~ 411 (499)
T 2r60_A 340 FPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTR----NGGPAEILDGG-KYGVLVDP-EDP 411 (499)
T ss_dssp EECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEES----SBHHHHHTGGG-TSSEEECT-TCH
T ss_pred CCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEec----CCCHHHHhcCC-ceEEEeCC-CCH
Confidence 8999865 578889 88 66432 3 368999999999999864 34556667763 67888766 588
Q ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 407 GEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 407 ~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
+++.++|.++++| +..+++..+ ..++...+.-+.++.++++++.++
T Consensus 412 ~~la~~i~~ll~~---~~~~~~~~~---~a~~~~~~~fs~~~~~~~~~~~y~ 457 (499)
T 2r60_A 412 EDIARGLLKAFES---EETWSAYQE---KGKQRVEERYTWQETARGYLEVIQ 457 (499)
T ss_dssp HHHHHHHHHHHSC---HHHHHHHHH---HHHHHHHHHSBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC---HHHHHHHHH---HHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999998 443332222 221111133445556666665554
No 34
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.28 E-value=2.1e-11 Score=117.89 Aligned_cols=129 Identities=12% Similarity=0.128 Sum_probs=84.6
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcC-----CCCEEEEEcCCccCCCccCCCCchhHHhhc--CCCCccccccCh-
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANS-----KVPFLWVVRPGLVRGAEWIEPLPQGFLETL--DGRGHMVKWAPQ- 343 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~--~~~~~v~~~vp~- 343 (460)
++++++++.|...... +.+..+++|+..+ +.++++..+.+. .+-+.+.+.. .+++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--------~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--------NVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--------HHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--------HHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 4567888888755321 3445566666542 345555333211 0112222211 246677676765
Q ss_pred --hhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhcc
Q 040486 344 --QEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 344 --~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
.++++.+|+ ||+.+| |++.||+++|+|+|+.+..+++.. +.+. |.|..++. +.++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS--SHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC--CHHHHHHHHHHHHhC
Confidence 468999999 999885 458899999999999987544332 3454 88888765 899999999999998
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.27 E-value=1.5e-09 Score=104.15 Aligned_cols=135 Identities=18% Similarity=0.284 Sum_probs=90.2
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHcCCC----C-EEEEEcCCccCCCccCCCCchhHHh---h--cCCCCccccccC
Q 040486 273 KSVIYVSFGSIAAINETEFLEVAWGLANSKV----P-FLWVVRPGLVRGAEWIEPLPQGFLE---T--LDGRGHMVKWAP 342 (460)
Q Consensus 273 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~----~-~i~~~~~~~~~~~~~~~~lp~~~~~---~--~~~~~~v~~~vp 342 (460)
+..+++..|+... ......++++++.+.. . -++.++.+. .+.+.+ . ..+++.+.++..
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~----------~~~~~~~~~~~~~~~~v~~~g~~~ 262 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDK----------PRKFEALAEKLGVRSNVHFFSGRN 262 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSC----------CHHHHHHHHHHTCGGGEEEESCCS
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCC----------HHHHHHHHHHcCCCCcEEECCCcc
Confidence 3456667777553 3455667788877632 2 234444321 012211 1 124567778765
Q ss_pred h-hhhhccCCCccccc----ccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHh
Q 040486 343 Q-QEVLAHPATGGFWT----HCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVM 417 (460)
Q Consensus 343 ~-~~~l~~~~~~~~I~----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll 417 (460)
+ .++++.+++ +|. -|.-+++.||+++|+|+|+.+. ..+...+++. +.|..++..-+.+++.++|.+++
T Consensus 263 ~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 263 DVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPFSQEQLNEVLRKAL 335 (374)
T ss_dssp CHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSCCHHHHHHHHHHHH
T ss_pred cHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCCCHHHHHHHHHHHH
Confidence 5 478999999 775 4567899999999999999654 4566778885 89988863368999999999999
Q ss_pred ccchHHHHHHHH
Q 040486 418 TEAEGQEIRVRI 429 (460)
Q Consensus 418 ~~~~~~~~~~~a 429 (460)
+| +..+++.
T Consensus 336 ~~---~~~~~~~ 344 (374)
T 2iw1_A 336 TQ---SPLRMAW 344 (374)
T ss_dssp HC---HHHHHHH
T ss_pred cC---hHHHHHH
Confidence 98 4444433
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.26 E-value=2.1e-10 Score=108.93 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=83.2
Q ss_pred EEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChh---hhhccCCC
Q 040486 276 IYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQ---EVLAHPAT 352 (460)
Q Consensus 276 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~---~~l~~~~~ 352 (460)
+++..|+.. ..+....++++++.++.++++. +.+. . ...+ ..+.+..++++.+.+++++. +++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~-G~g~--~---~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLA-GPAW--E---PEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEE-SCCC--C---HHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEE-eCcc--c---HHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 344567655 3455666778887777776554 3321 0 0001 12223334778889999975 68889999
Q ss_pred ccccc--c-----------cC-chhHHHHHhhCCceeccccccchhhhHHHHhh--hhcceeeeCCccCHHHHHHHHHHH
Q 040486 353 GGFWT--H-----------CG-WNSTLESICEGVPMICQPCFGDQMVNARYVSD--VWKVGLHLERKLERGEVERTIRRV 416 (460)
Q Consensus 353 ~~~I~--H-----------gG-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~--~~G~g~~~~~~~~~~~l~~~i~~l 416 (460)
+|. . -| -.++.||+++|+|+|+... ..+...+++ . +.|..++. +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~--d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF--APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC--CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC--CHHHHHHHHHHH
Confidence 663 2 33 4689999999999999665 446666766 4 56665554 899999999999
Q ss_pred hc
Q 040486 417 MT 418 (460)
Q Consensus 417 l~ 418 (460)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 86
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.19 E-value=5.1e-10 Score=107.65 Aligned_cols=161 Identities=11% Similarity=0.116 Sum_probs=95.7
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcC-----CCCEEEEEcCCccCCCccCCCCchhHHhhcC--CCCccccccChh
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANS-----KVPFLWVVRPGLVRGAEWIEPLPQGFLETLD--GRGHMVKWAPQQ 344 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~--~~~~v~~~vp~~ 344 (460)
++++++++.|...... +.+..+++|++.+ +.++++ +.+. . ..+-+.+.+... +++.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~--~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 274 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHM--N----PVVRETANDILGDYGRIHLIEPLDVI 274 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCS--C----HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCC--C----HHHHHHHHHHhhccCCEEEeCCCCHH
Confidence 4566777777654321 4456667776543 334433 2221 0 001122222222 567787777754
Q ss_pred ---hhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccch
Q 040486 345 ---EVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAE 421 (460)
Q Consensus 345 ---~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~ 421 (460)
.+++.+++ +|+.+| |++.||+++|+|+|+.+..+..+ .+.+. |.|..++. +.++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~----e~v~~-g~g~~v~~--d~~~la~~i~~ll~~-- 342 (375)
T 3beo_A 275 DFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP----EGIEA-GTLKLAGT--DEETIFSLADELLSD-- 342 (375)
T ss_dssp HHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH----HHHHT-TSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc----eeecC-CceEEcCC--CHHHHHHHHHHHHhC--
Confidence 68899999 998874 56889999999999985433332 23443 88877754 889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 422 GQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
+..+++ |++..+. ..+..+.++.++.+.+.+.
T Consensus 343 -~~~~~~---~~~~~~~-~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 343 -KEAHDK---MSKASNP-YGDGRASERIVEAILKHFN 374 (375)
T ss_dssp -HHHHHH---HCCCCCT-TCCSCHHHHHHHHHHHHTT
T ss_pred -hHhHhh---hhhcCCC-CCCCcHHHHHHHHHHHHhh
Confidence 554443 2222221 1134455556666655543
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.09 E-value=2e-09 Score=105.05 Aligned_cols=111 Identities=10% Similarity=0.034 Sum_probs=77.1
Q ss_pred CCCccccccC---h---hhhhccCCCccccccc----CchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCC
Q 040486 333 GRGHMVKWAP---Q---QEVLAHPATGGFWTHC----GWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLER 402 (460)
Q Consensus 333 ~~~~v~~~vp---~---~~~l~~~~~~~~I~Hg----G~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~ 402 (460)
+++.+.+|++ + .++++.+|+ +|.-+ .-.++.||+++|+|+|+.+. ..+...+++. +.|..++
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~- 364 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR- 364 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-
Confidence 5678888775 2 357888998 77554 45689999999999999654 4566777774 7887775
Q ss_pred ccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 403 KLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 403 ~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
+.++|.++|.++++| +..+++..+ ..++...+.-+.++.++++++.+++
T Consensus 365 --d~~~la~~i~~ll~~---~~~~~~~~~---~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 --DANEAVEVVLYLLKH---PEVSKEMGA---KAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp --SHHHHHHHHHHHHHC---HHHHHHHHH---HHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHhC---HHHHHHHHH---HHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 889999999999998 444333222 2221111344567777787777765
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.94 E-value=3.8e-09 Score=101.56 Aligned_cols=348 Identities=11% Similarity=0.101 Sum_probs=177.6
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC-CCCC--CCCeeEEecCC-CCCCcccccccHHHHH
Q 040486 11 QKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSP-NPSN--YPHFTFCSIED-SLSETEASTADLVALL 86 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~-~~~~--~~g~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (460)
.--+.||++++ |++-.+.-+.+|.++|.++ +++.++.|..... .... ..+|.. +-|+ .+..+ ..+..+.+
T Consensus 6 ~~~~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~~~~~i-~~~~~~l~~~---~~~~~~~~ 79 (385)
T 4hwg_A 6 HHHMLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFFDDMGI-RKPDYFLEVA---ADNTAKSI 79 (385)
T ss_dssp --CCCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHHC-CCC-CCCSEECCCC---CCCSHHHH
T ss_pred hhhhhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHHhhCCC-CCCceecCCC---CCCHHHHH
Confidence 34567888776 7888999999999999887 9988887763311 0010 012221 0111 11111 12222222
Q ss_pred HHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecC--CchhHHHHHHHcCCceEEEecccHHHHHHHHhcchhhccCC
Q 040486 87 SLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDA--TWYFTQAVAESLKLSRIVLRTNSVSSFLVFAAFPVLSQKGY 164 (460)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~--~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 164 (460)
..+. ..+.+.+++ .+||+|++-. .+.++..+|..+|||.+.+.... .++
T Consensus 80 ~~~~----~~l~~~l~~----------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eagl---------------rs~ 130 (385)
T 4hwg_A 80 GLVI----EKVDEVLEK----------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAGN---------------RCF 130 (385)
T ss_dssp HHHH----HHHHHHHHH----------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESCCC---------------CCS
T ss_pred HHHH----HHHHHHHHh----------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeCCC---------------ccc
Confidence 2221 222333333 3799988633 34445789999999977653220 000
Q ss_pred CCCCCCCCCccCCCCCCCCCCCCCCcccccchhHHHHHHHHHhhcccccEEEEcChhHhhHHHHHHhhhcCC-CCccccC
Q 040486 165 FPIRDSQSEAPVPELPPLRVKDIPVVETCYRETLHRLVTEATNQMKVSSGCIWNSLQDLELASLTKFHQDFP-IPMFPIG 243 (460)
Q Consensus 165 ~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~-~p~~~vG 243 (460)
.. .+ .......... +-++.++..+...-+. + .+.-.+ .+++++|
T Consensus 131 ------------------~~-~~------pee~nR~~~~------~~a~~~~~~te~~~~~--l--~~~G~~~~~I~vtG 175 (385)
T 4hwg_A 131 ------------------DQ-RV------PEEINRKIID------HISDVNITLTEHARRY--L--IAEGLPAELTFKSG 175 (385)
T ss_dssp ------------------CT-TS------THHHHHHHHH------HHCSEEEESSHHHHHH--H--HHTTCCGGGEEECC
T ss_pred ------------------cc-cC------cHHHHHHHHH------hhhceeecCCHHHHHH--H--HHcCCCcCcEEEEC
Confidence 00 00 0001111111 1245555544332221 1 121111 1277787
Q ss_pred CCCcCCCCCCcccccCccccccccCCCCCCeEEEEEccccccCC-HHHHHHHHHHHHcC----CCCEEEEEcCCccCCCc
Q 040486 244 PFHKFFSASSSSLLAHDQTSISWLDKQTPKSVIYVSFGSIAAIN-ETEFLEVAWGLANS----KVPFLWVVRPGLVRGAE 318 (460)
Q Consensus 244 ~l~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~----~~~~i~~~~~~~~~~~~ 318 (460)
-...+.-.. ........++.+.+.- ++++.++++.|...... .+.+..+++|+..+ +..+|+......
T Consensus 176 np~~D~~~~-~~~~~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~----- 248 (385)
T 4hwg_A 176 SHMPEVLDR-FMPKILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRT----- 248 (385)
T ss_dssp CSHHHHHHH-HHHHHHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHH-----
T ss_pred CchHHHHHH-hhhhcchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHH-----
Confidence 433221100 0000011223333333 23568888887654322 24566777777653 566777654211
Q ss_pred cCCCCchhHHhh---c--CCCCccccccCh---hhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHH
Q 040486 319 WIEPLPQGFLET---L--DGRGHMVKWAPQ---QEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYV 390 (460)
Q Consensus 319 ~~~~lp~~~~~~---~--~~~~~v~~~vp~---~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v 390 (460)
.+.+.+. . .+++++.+.+++ ..+++++++ +|+-+|. .+.||.+.|+|+|+++...+.+. .
T Consensus 249 -----~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~ 316 (385)
T 4hwg_A 249 -----KKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----G 316 (385)
T ss_dssp -----HHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----H
T ss_pred -----HHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----h
Confidence 0111111 1 134566665554 468999999 9999886 46999999999999987654222 2
Q ss_pred hhhhcceeeeCCccCHHHHHHHHHHHhccch-HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 391 SDVWKVGLHLERKLERGEVERTIRRVMTEAE-GQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 391 ~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
.+. |.++.+. .+.+.|.+++.++++|++ ...+++++. .+- ..++++++.++.+.+++
T Consensus 317 v~~-G~~~lv~--~d~~~i~~ai~~ll~d~~~~~~m~~~~~----~~~---g~g~aa~rI~~~l~~~~ 374 (385)
T 4hwg_A 317 MDA-GTLIMSG--FKAERVLQAVKTITEEHDNNKRTQGLVP----DYN---EAGLVSKKILRIVLSYV 374 (385)
T ss_dssp HHH-TCCEECC--SSHHHHHHHHHHHHTTCBTTBCCSCCCH----HHH---TCCCHHHHHHHHHHHHH
T ss_pred hhc-CceEEcC--CCHHHHHHHHHHHHhChHHHHHhhccCC----CCC---CCChHHHHHHHHHHHHh
Confidence 443 8776664 378999999999999832 111212111 120 25667777666665544
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.87 E-value=3e-07 Score=95.93 Aligned_cols=112 Identities=11% Similarity=0.069 Sum_probs=71.7
Q ss_pred CCCccccc----cChhhhhc----cCCCcccccc----cCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeee
Q 040486 333 GRGHMVKW----APQQEVLA----HPATGGFWTH----CGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHL 400 (460)
Q Consensus 333 ~~~~v~~~----vp~~~~l~----~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~ 400 (460)
+++.+.++ +|+.++.. .+++ +|.- |--.++.||+++|+|+|+. |-......+++. +.|..+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEe
Confidence 45566664 44455443 5677 7743 3346999999999999994 555666777774 788888
Q ss_pred CCccCHHHHHHHHHHHh----ccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 401 ERKLERGEVERTIRRVM----TEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 401 ~~~~~~~~l~~~i~~ll----~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
+. -+.++++++|.+++ .| +..+++ +++..++...+.-+-...++++++.++
T Consensus 713 ~p-~D~e~LA~aI~~lL~~Ll~d---~~~~~~---m~~~ar~~a~~~fSwe~~a~~ll~lY~ 767 (816)
T 3s28_A 713 DP-YHGDQAADTLADFFTKCKED---PSHWDE---ISKGGLQRIEEKYTWQIYSQRLLTLTG 767 (816)
T ss_dssp CT-TSHHHHHHHHHHHHHHHHHC---THHHHH---HHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHHHHHhccC---HHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 76 57889999997776 67 333332 222222222245556667777666554
No 41
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.79 E-value=2.8e-07 Score=89.67 Aligned_cols=110 Identities=10% Similarity=0.026 Sum_probs=71.9
Q ss_pred CccccccChh---hhhccCCCccccc----ccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcc-----------
Q 040486 335 GHMVKWAPQQ---EVLAHPATGGFWT----HCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKV----------- 396 (460)
Q Consensus 335 ~~v~~~vp~~---~~l~~~~~~~~I~----HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~----------- 396 (460)
+.+.+|+|+. +++..+++ +|. -|.-.++.||+++|+|+|+.. -......+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~----~~g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISA----VGGADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEEC----CHHHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcC----CCChHHHHccC-ccccccccccccc
Confidence 3455999954 47888998 663 233458999999999999854 33445555542 22
Q ss_pred ----ee--eeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 397 ----GL--HLERKLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 397 ----g~--~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
|. .+.. -+.++|.++| ++++| +..+++ +++..++...+.-+.++.++++.+.+++
T Consensus 329 ~~~~G~~gl~~~-~d~~~la~~i-~l~~~---~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 389 (413)
T 3oy2_A 329 DDRDGIGGIEGI-IDVDDLVEAF-TFFKD---EKNRKE---YGKRVQDFVKTKPTWDDISSDIIDFFNS 389 (413)
T ss_dssp TTTCSSCCEEEE-CCHHHHHHHH-HHTTS---HHHHHH---HHHHHHHHHTTSCCHHHHHHHHHHHHHH
T ss_pred ccccCcceeeCC-CCHHHHHHHH-HHhcC---HHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 54 4443 4899999999 99999 544433 3333333222455677777777777654
No 42
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.72 E-value=5.9e-07 Score=87.23 Aligned_cols=72 Identities=11% Similarity=-0.006 Sum_probs=56.1
Q ss_pred CCccccccChh---hhhccCCCccccc---ccC-chhHHHHH-------hhCCceeccccccchhhhHHHHhhhhcceee
Q 040486 334 RGHMVKWAPQQ---EVLAHPATGGFWT---HCG-WNSTLESI-------CEGVPMICQPCFGDQMVNARYVSDVWKVGLH 399 (460)
Q Consensus 334 ~~~v~~~vp~~---~~l~~~~~~~~I~---HgG-~gs~~eal-------~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~ 399 (460)
++.+.+++|+. ++++.+|+ +|. +-| -+++.||+ ++|+|+|+... +.+. ..|..
T Consensus 266 ~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l 332 (406)
T 2hy7_A 266 NVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRF 332 (406)
T ss_dssp TEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEE
T ss_pred CEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEE
Confidence 34888999975 47889998 653 334 36789999 99999999654 6663 66876
Q ss_pred -eCCccCHHHHHHHHHHHhcc
Q 040486 400 -LERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 400 -~~~~~~~~~l~~~i~~ll~~ 419 (460)
++. -+.++|+++|.++++|
T Consensus 333 ~v~~-~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 333 GYTP-GNADSVIAAITQALEA 352 (406)
T ss_dssp EECT-TCHHHHHHHHHHHHHC
T ss_pred EeCC-CCHHHHHHHHHHHHhC
Confidence 665 5889999999999988
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.60 E-value=2.7e-06 Score=84.55 Aligned_cols=157 Identities=13% Similarity=0.077 Sum_probs=92.8
Q ss_pred EEEEEccccccCCHHHHHHHHHHHHcC---CCCEEEEEcCCccCCCccCCCCchhH---HhhcCCCCc-cccccChh---
Q 040486 275 VIYVSFGSIAAINETEFLEVAWGLANS---KVPFLWVVRPGLVRGAEWIEPLPQGF---LETLDGRGH-MVKWAPQQ--- 344 (460)
Q Consensus 275 ~v~vs~Gs~~~~~~~~~~~~~~al~~~---~~~~i~~~~~~~~~~~~~~~~lp~~~---~~~~~~~~~-v~~~vp~~--- 344 (460)
.+++..|.... .+.+..+++|++.+ +.+++++-.+.. ..-+.+ .+...+++. +.++ +..
T Consensus 293 ~~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~--------~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~ 361 (485)
T 2qzs_A 293 PLFAVVSRLTS--QKGLDLVLEALPGLLEQGGQLALLGAGDP--------VLQEGFLAAAAEYPGQVGVQIGY-HEAFSH 361 (485)
T ss_dssp CEEEEEEEESG--GGCHHHHHHHHHHHHHTTCEEEEEEEECH--------HHHHHHHHHHHHSTTTEEEEESC-CHHHHH
T ss_pred eEEEEeccCcc--ccCHHHHHHHHHHHhhCCcEEEEEeCCch--------HHHHHHHHHHHhCCCcEEEeCCC-CHHHHH
Confidence 45556676653 33344455555443 555554432210 011112 222335665 5577 443
Q ss_pred hhhccCCCcccccc----cCchhHHHHHhhCCceeccccccchhhhHHHHhhhh---------cceeeeCCccCHHHHHH
Q 040486 345 EVLAHPATGGFWTH----CGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVW---------KVGLHLERKLERGEVER 411 (460)
Q Consensus 345 ~~l~~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~g~~~~~~~~~~~l~~ 411 (460)
.+++.+|+ +|.- |.-.++.||+++|+|+|+... ..+...+.+ - +.|..++. -+.++|++
T Consensus 362 ~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~ 433 (485)
T 2qzs_A 362 RIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFED-SNAWSLLR 433 (485)
T ss_dssp HHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEECS-SSHHHHHH
T ss_pred HHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEECC-CCHHHHHH
Confidence 57899999 7633 334688999999999999644 345555554 2 46777765 58899999
Q ss_pred HHHHHh---ccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 412 TIRRVM---TEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 412 ~i~~ll---~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
+|.+++ +| +..++ ++++..++ +.-+-++.++++++.+++
T Consensus 434 ~i~~ll~~~~~---~~~~~---~~~~~~~~---~~fs~~~~~~~~~~ly~~ 475 (485)
T 2qzs_A 434 AIRRAFVLWSR---PSLWR---FVQRQAMA---MDFSWQVAAKSYRELYYR 475 (485)
T ss_dssp HHHHHHHHHTS---HHHHH---HHHHHHHH---CCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC---HHHHH---HHHHHHHh---hcCCHHHHHHHHHHHHHH
Confidence 999999 67 44433 33333332 556667777777776654
No 44
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.59 E-value=1.2e-06 Score=87.13 Aligned_cols=159 Identities=10% Similarity=-0.006 Sum_probs=92.5
Q ss_pred EEEEccccccCCHHHHHHHHHHHHc---CCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCc-cccccChh---hhhc
Q 040486 276 IYVSFGSIAAINETEFLEVAWGLAN---SKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGH-MVKWAPQQ---EVLA 348 (460)
Q Consensus 276 v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~-v~~~vp~~---~~l~ 348 (460)
+++..|.... .+.+..+++|+.. .+.+++++-.+.. .. ...+ ....+..++++. +.++ ++. .+++
T Consensus 293 ~i~~vGrl~~--~Kg~~~li~a~~~l~~~~~~l~ivG~g~~-~~---~~~l-~~~~~~~~~~v~~~~g~-~~~~~~~~~~ 364 (485)
T 1rzu_A 293 LFCVISRLTW--QKGIDLMAEAVDEIVSLGGRLVVLGAGDV-AL---EGAL-LAAASRHHGRVGVAIGY-NEPLSHLMQA 364 (485)
T ss_dssp EEEEESCBST--TTTHHHHHTTHHHHHHTTCEEEEEECBCH-HH---HHHH-HHHHHHTTTTEEEEESC-CHHHHHHHHH
T ss_pred EEEEEccCcc--ccCHHHHHHHHHHHHhcCceEEEEeCCch-HH---HHHH-HHHHHhCCCcEEEecCC-CHHHHHHHHh
Confidence 6667787764 2333444444443 3556555433210 00 0001 111223335666 4677 543 5789
Q ss_pred cCCCcccccc----cCchhHHHHHhhCCceeccccccchhhhHHHHhhhh---------cceeeeCCccCHHHHHHHHHH
Q 040486 349 HPATGGFWTH----CGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVW---------KVGLHLERKLERGEVERTIRR 415 (460)
Q Consensus 349 ~~~~~~~I~H----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~---------G~g~~~~~~~~~~~l~~~i~~ 415 (460)
.+|+ +|.- |--.++.||+++|+|+|+... ......+++ - +.|..++. -+.++|+++|.+
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~~-~d~~~la~~i~~ 436 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFSP-VTLDGLKQAIRR 436 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEESS-CSHHHHHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeCC-CCHHHHHHHHHH
Confidence 9999 7632 334689999999999999554 345555554 2 46777765 578999999999
Q ss_pred Hh---ccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 416 VM---TEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 416 ll---~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
++ +| +..++ ++++..++ +.-+-++.++++++.+++
T Consensus 437 ll~~~~~---~~~~~---~~~~~~~~---~~fs~~~~~~~~~~~y~~ 474 (485)
T 1rzu_A 437 TVRYYHD---PKLWT---QMQKLGMK---SDVSWEKSAGLYAALYSQ 474 (485)
T ss_dssp HHHHHTC---HHHHH---HHHHHHHT---CCCBHHHHHHHHHHHHHH
T ss_pred HHHHhCC---HHHHH---HHHHHHHH---HhCChHHHHHHHHHHHHH
Confidence 99 67 44433 33333332 455666677777766553
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.54 E-value=1.9e-07 Score=79.45 Aligned_cols=138 Identities=9% Similarity=0.060 Sum_probs=91.5
Q ss_pred EEEEccccccCCHHHHHHHHHHHHcC-CCCEEEEEcCCccCCCccCCCCchhH---HhhcCCCCccccccCh---hhhhc
Q 040486 276 IYVSFGSIAAINETEFLEVAWGLANS-KVPFLWVVRPGLVRGAEWIEPLPQGF---LETLDGRGHMVKWAPQ---QEVLA 348 (460)
Q Consensus 276 v~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~lp~~~---~~~~~~~~~v~~~vp~---~~~l~ 348 (460)
+++..|+... ......++++++.+ +.++++.-.+.. ...+-.-+ ....++++.+.+|+++ ..+++
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~------~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~ 96 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSK------GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYS 96 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCT------TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCcc------HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHH
Confidence 4446777653 45566788888887 456555433221 11121111 1123457888999998 46889
Q ss_pred cCCCccccc---ccCc-hhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccchHHH
Q 040486 349 HPATGGFWT---HCGW-NSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAEGQE 424 (460)
Q Consensus 349 ~~~~~~~I~---HgG~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~~~~ 424 (460)
.+++ +|. +.|. .++.||+++|+|+|+.. ...+...+++. +.|..+ . -+.+++.++|.++++| +.
T Consensus 97 ~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~-~d~~~l~~~i~~l~~~---~~ 164 (177)
T 2f9f_A 97 RCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N-ADVNEIIDAMKKVSKN---PD 164 (177)
T ss_dssp HCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C-SCHHHHHHHHHHHHHC---TT
T ss_pred hCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C-CCHHHHHHHHHHHHhC---HH
Confidence 9999 665 3344 59999999999999854 45666777774 788877 4 6899999999999988 33
Q ss_pred H-HHHHHHHH
Q 040486 425 I-RVRIMILK 433 (460)
Q Consensus 425 ~-~~~a~~~~ 433 (460)
. ++++++.+
T Consensus 165 ~~~~~~~~~a 174 (177)
T 2f9f_A 165 KFKKDCFRRA 174 (177)
T ss_dssp TTHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3 44444433
No 46
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.53 E-value=1.3e-05 Score=81.42 Aligned_cols=116 Identities=7% Similarity=0.012 Sum_probs=75.6
Q ss_pred CCCccccccChh---hhhccCCCccccc---ccCchhHHHHHhhCCceeccccccchhhh-HHHHhhhhcceeeeCCccC
Q 040486 333 GRGHMVKWAPQQ---EVLAHPATGGFWT---HCGWNSTLESICEGVPMICQPCFGDQMVN-ARYVSDVWKVGLHLERKLE 405 (460)
Q Consensus 333 ~~~~v~~~vp~~---~~l~~~~~~~~I~---HgG~gs~~eal~~GvP~v~~P~~~DQ~~n-a~~v~~~~G~g~~~~~~~~ 405 (460)
+++++.+++|+. .++..+|+ ||. .|+-.++.||+++|+|+|++|...=.-.. +..+.. .|+...+.. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~~--~ 508 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNVA--D 508 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBCS--S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhcC--C
Confidence 456888999854 57889998 662 26667999999999999997753111111 344555 366554443 8
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHHHc
Q 040486 406 RGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCL--IQGGSSYQSLESLISYILS 459 (460)
Q Consensus 406 ~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~ 459 (460)
.+++.+++.++++| +..+++ +++..++.. .+.-+.++.++++.+.+++
T Consensus 509 ~~~la~~i~~l~~~---~~~~~~---~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~ 558 (568)
T 2vsy_A 509 DAAFVAKAVALASD---PAALTA---LHARVDVLRRASGVFHMDGFADDFGALLQA 558 (568)
T ss_dssp HHHHHHHHHHHHHC---HHHHHH---HHHHHHHHHHHSSTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC---HHHHHH---HHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 89999999999999 544433 333333222 2455666677777666553
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.24 E-value=0.00012 Score=70.00 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=70.6
Q ss_pred CccccccCh-hhhhccCCCcccccc-----cCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHH
Q 040486 335 GHMVKWAPQ-QEVLAHPATGGFWTH-----CGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGE 408 (460)
Q Consensus 335 ~~v~~~vp~-~~~l~~~~~~~~I~H-----gG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~ 408 (460)
+++.++... ..+++.+|+ ++.- +|..++.||+++|+|+|+-|..++.......+.+. |.++.. -+.++
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~---~d~~~ 335 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV---KNETE 335 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC---CSHHH
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe---CCHHH
Confidence 344454444 468888998 6542 23478999999999999877777777766666553 877665 36789
Q ss_pred HHHHHHHHhccch-HHHHHHHHHHHHHHHH
Q 040486 409 VERTIRRVMTEAE-GQEIRVRIMILKEKLN 437 (460)
Q Consensus 409 l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~ 437 (460)
|.++|.++++| + ...|.+++++..+.-.
T Consensus 336 La~ai~~ll~d-~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 336 LVTKLTELLSV-KKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp HHHHHHHHHHS-CCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhH-HHHHHHHHHHHHHHHhcc
Confidence 99999999988 5 6778888887766554
No 48
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=98.00 E-value=0.00061 Score=65.94 Aligned_cols=83 Identities=13% Similarity=0.029 Sum_probs=57.8
Q ss_pred CCccccccChh---hhhccCCCccccccc---Cc-hhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCH
Q 040486 334 RGHMVKWAPQQ---EVLAHPATGGFWTHC---GW-NSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLER 406 (460)
Q Consensus 334 ~~~v~~~vp~~---~~l~~~~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~ 406 (460)
++.+.+++|+. ++++.+|+ ||.-+ |. .++.||+++|+|+|+ -..+ ....+++. ..|..++. -+.
T Consensus 296 ~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-~d~ 366 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-LNP 366 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS-CSH
T ss_pred cEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC-CCH
Confidence 44788999875 47888999 76432 43 478999999999998 2222 22445553 57877766 688
Q ss_pred HHHHHHHHHHhccchHHHHHHH
Q 040486 407 GEVERTIRRVMTEAEGQEIRVR 428 (460)
Q Consensus 407 ~~l~~~i~~ll~~~~~~~~~~~ 428 (460)
++|+++|.++++| +..+++
T Consensus 367 ~~la~ai~~ll~~---~~~~~~ 385 (413)
T 2x0d_A 367 ENIAETLVELCMS---FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHH---TC----
T ss_pred HHHHHHHHHHHcC---HHHHHH
Confidence 9999999999998 555444
No 49
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.88 E-value=0.00022 Score=74.13 Aligned_cols=171 Identities=16% Similarity=0.126 Sum_probs=109.8
Q ss_pred CCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhc------CCCCccccccChh
Q 040486 271 TPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETL------DGRGHMVKWAPQQ 344 (460)
Q Consensus 271 ~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~------~~~~~v~~~vp~~ 344 (460)
++..++|.+|-+.....++.+..-.+.|++.+--++|........ -.++.+.. .+++++.+..|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--------~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--------EPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--------HHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--------HHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 456799999999999999999999999999998888987654311 12222211 2456677788754
Q ss_pred ---hhhccCCCccccc---ccCchhHHHHHhhCCceecccccc-chhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHh
Q 040486 345 ---EVLAHPATGGFWT---HCGWNSTLESICEGVPMICQPCFG-DQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVM 417 (460)
Q Consensus 345 ---~~l~~~~~~~~I~---HgG~gs~~eal~~GvP~v~~P~~~-DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll 417 (460)
..+..+|+ ++- .+|.+|+.|||+.|||+|.+|-.. =-+.-+..+.. +|+...+- .+.++-.+.-.++-
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~-~gl~e~ia--~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTC-LGCLELIA--KNRQEYEDIAVKLG 666 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHH-HTCGGGBC--SSHHHHHHHHHHHH
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHH-cCCccccc--CCHHHHHHHHHHHh
Confidence 45566777 654 899999999999999999999532 22233444555 46654443 36666555555777
Q ss_pred ccchHHHHHHHHH-HHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 418 TEAEGQEIRVRIM-ILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 418 ~~~~~~~~~~~a~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
+| +...+..+ +|.+.+..+ .--...+++.++.+.++.
T Consensus 667 ~d---~~~l~~lr~~l~~~~~~s--~l~d~~~~~~~le~a~~~ 704 (723)
T 4gyw_A 667 TD---LEYLKKVRGKVWKQRISS--PLFNTKQYTMELERLYLQ 704 (723)
T ss_dssp HC---HHHHHHHHHHHHHHHHHS--STTCHHHHHHHHHHHHHH
T ss_pred cC---HHHHHHHHHHHHHHHHhC--cCcCHHHHHHHHHHHHHH
Confidence 77 33333322 233333221 233456667777666654
No 50
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.80 E-value=0.00011 Score=61.24 Aligned_cols=139 Identities=13% Similarity=0.145 Sum_probs=81.8
Q ss_pred eEEEEEccccccCCHHHHHHHHHHHHcCCC--CEE-EEEcCCccCCCccCCCCchhH---HhhcCCCCccccccChh---
Q 040486 274 SVIYVSFGSIAAINETEFLEVAWGLANSKV--PFL-WVVRPGLVRGAEWIEPLPQGF---LETLDGRGHMVKWAPQQ--- 344 (460)
Q Consensus 274 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~--~~i-~~~~~~~~~~~~~~~~lp~~~---~~~~~~~~~v~~~vp~~--- 344 (460)
+++++..|+... .+....+++++..+.. ++- +.++.+. ..+.+ .+....++.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~---------~~~~~~~~~~~~~~~v~~-g~~~~~~~~ 69 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGP---------DEKKIKLLAQKLGVKAEF-GFVNSNELL 69 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCST---------THHHHHHHHHHHTCEEEC-CCCCHHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCc---------cHHHHHHHHHHcCCeEEE-eecCHHHHH
Confidence 456777887653 4556667788877632 232 3333221 11222 2223335677 999874
Q ss_pred hhhccCCCccccc----ccCchhHHHHHhhCC-ceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhcc
Q 040486 345 EVLAHPATGGFWT----HCGWNSTLESICEGV-PMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 345 ~~l~~~~~~~~I~----HgG~gs~~eal~~Gv-P~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
.++..+++ +|. -|.-.++.||+++|+ |+|+.... ......+.+. +. .+.. -+.+++.++|.++++|
T Consensus 70 ~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~~-~~--~~~~-~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 70 EILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALDE-RS--LFEP-NNAKDLSAKIDWWLEN 140 (166)
T ss_dssp HHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSSG-GG--EECT-TCHHHHHHHHHHHHHC
T ss_pred HHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccCC-ce--EEcC-CCHHHHHHHHHHHHhC
Confidence 57889998 765 233469999999996 99993322 2222233342 33 2333 5889999999999998
Q ss_pred ch-HHHHHHHHHHHH
Q 040486 420 AE-GQEIRVRIMILK 433 (460)
Q Consensus 420 ~~-~~~~~~~a~~~~ 433 (460)
.+ ...+.+++++..
T Consensus 141 ~~~~~~~~~~~~~~~ 155 (166)
T 3qhp_A 141 KLERERMQNEYAKSA 155 (166)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 32 233444444443
No 51
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.69 E-value=0.00025 Score=67.03 Aligned_cols=106 Identities=10% Similarity=0.020 Sum_probs=76.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCee-EEecCCCCCCcccccccHHHHHHH
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSK--GFSITIIHTNFNSPNPSNYPHFT-FCSIEDSLSETEASTADLVALLSL 88 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 88 (460)
.+.+||+++-..+.||+.-+.++.++|+++ +.+|++++.+.+.+.....+++. ++.++.. .....+.
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p~vd~vi~~~~~---------~~~~~~~- 75 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNPNIDELIVVDKK---------GRHNSIS- 75 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCTTCSEEEEECCS---------SHHHHHH-
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCCccEEEEeCcc---------cccccHH-
Confidence 456999999999999999999999999997 99999999988877776656775 5555421 0000111
Q ss_pred HHHhcchhHHHHHHHHhcccccccCCCe-eEEEecCCchhHHHHHHHcCCceEE
Q 040486 89 LNVQCVVPFRNCLAKLLSNVEEEEKEPI-ACLITDATWYFTQAVAESLKLSRIV 141 (460)
Q Consensus 89 ~~~~~~~~l~~~l~~l~~~~~~~~~~kp-D~VI~D~~~~~~~~~A~~lgiP~v~ 141 (460)
.+..++.++.+ .++ |++|.-....-...++...|+|..+
T Consensus 76 -------~~~~l~~~Lr~-------~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 76 -------GLNEVAREINA-------KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -------HHHHHHHHHHH-------HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -------HHHHHHHHHhh-------CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 12234455554 479 9999766666667788999999766
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.68 E-value=0.00047 Score=59.17 Aligned_cols=77 Identities=13% Similarity=0.157 Sum_probs=59.8
Q ss_pred CCcc-ccccChh---hhhccCCCccccccc---C-chhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccC
Q 040486 334 RGHM-VKWAPQQ---EVLAHPATGGFWTHC---G-WNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLE 405 (460)
Q Consensus 334 ~~~v-~~~vp~~---~~l~~~~~~~~I~Hg---G-~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~ 405 (460)
++.+ .+++++. .++..+++ +|.-. | -.++.||+++|+|+|+... ..+...+ +. +.|..++. -+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~-~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA-GD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT-TC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC-CC
Confidence 7788 8999953 68889998 66433 3 4689999999999988643 4555556 63 77877765 57
Q ss_pred HHHHHHHHHHHhc-c
Q 040486 406 RGEVERTIRRVMT-E 419 (460)
Q Consensus 406 ~~~l~~~i~~ll~-~ 419 (460)
.+.+.++|.++++ |
T Consensus 167 ~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 167 PGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 8999999999999 8
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.62 E-value=0.0014 Score=61.75 Aligned_cols=103 Identities=10% Similarity=0.030 Sum_probs=67.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCe-eEEecCCCCCCcccccccHHHHHHHHHH
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSK--GFSITIIHTNFNSPNPSNYPHF-TFCSIEDSLSETEASTADLVALLSLLNV 91 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (460)
|||+++...+.|++.-..++.++|+++ +.+|++++.+...+.....+.+ +++.++.. . ...
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p~i~~v~~~~~~--~---~~~----------- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMPEVNEAIPMPLG--H---GAL----------- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCTTEEEEEEC-----------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCCccCEEEEecCC--c---ccc-----------
Confidence 799999988889999999999999987 9999999997555544443455 34444210 0 000
Q ss_pred hcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEE
Q 040486 92 QCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIV 141 (460)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~ 141 (460)
....+..+...+.+ .++|++|.-....-...++...|+|..+
T Consensus 65 -~~~~~~~l~~~l~~-------~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -EIGERRKLGHSLRE-------KRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -CHHHHHHHHHHTTT-------TTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -chHHHHHHHHHHHh-------cCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 00112334455544 5799999433345556788889999754
No 54
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.45 E-value=0.00044 Score=64.80 Aligned_cols=111 Identities=15% Similarity=0.241 Sum_probs=81.2
Q ss_pred CCccccccChhhh---hccCCCcccccccCc---------hhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeC
Q 040486 334 RGHMVKWAPQQEV---LAHPATGGFWTHCGW---------NSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLE 401 (460)
Q Consensus 334 ~~~v~~~vp~~~~---l~~~~~~~~I~HgG~---------gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~ 401 (460)
|+.+.+|+|+.++ |+.++.+++.+-+.. +-+.|++++|+|+|+ .+...++..+++. |+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~----~~~~~~~~~v~~~-~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIV----QEGIANQELIENN-GLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEE----ETTCTTTHHHHHH-TCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEE----ccChhHHHHHHhC-CeEEEeC
Confidence 4488999999764 555566556533333 357899999999997 4466788899996 9999886
Q ss_pred CccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 402 RKLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 402 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
+.+++.+++..+. +++...|++++++.+++++ .+....+++.+.+..+
T Consensus 290 ---~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~----~~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILR----KGFFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHH----TTHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHh
Confidence 4678888888764 3346789999999999988 5666666666655443
No 55
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.33 E-value=0.00097 Score=66.62 Aligned_cols=138 Identities=10% Similarity=0.047 Sum_probs=89.0
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEE--cCCccCCCccCCCCchhH-HhhcCCCCccccccChhh---h
Q 040486 273 KSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVV--RPGLVRGAEWIEPLPQGF-LETLDGRGHMVKWAPQQE---V 346 (460)
Q Consensus 273 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~--~~~~~~~~~~~~~lp~~~-~~~~~~~~~v~~~vp~~~---~ 346 (460)
..++|.+|+......++.+....+.+++.+..++|.. +...... ..+-..+ ..-..+++++.+.+|+.+ .
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~----~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~ 515 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGIT----HPYVERFIKSYLGDSATAHPHSPYHQYLRI 515 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGG----HHHHHHHHHHHHGGGEEEECCCCHHHHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhh----HHHHHHHHHcCCCccEEEcCCCCHHHHHHH
Confidence 4689999999888889999988899988887777753 3211000 0000011 111224566778888754 5
Q ss_pred hccCCCccccc---ccCchhHHHHHhhCCceeccccccc-hhhhHHHHhhhhcceee-eCCccCHHHHHHHHHHHhcc
Q 040486 347 LAHPATGGFWT---HCGWNSTLESICEGVPMICQPCFGD-QMVNARYVSDVWKVGLH-LERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 347 l~~~~~~~~I~---HgG~gs~~eal~~GvP~v~~P~~~D-Q~~na~~v~~~~G~g~~-~~~~~~~~~l~~~i~~ll~~ 419 (460)
+..+|+ ++. .+|..|+.|||++|||+|.++-..= -..-+..+.. .|+.-. +. -+.++..+...++.+|
T Consensus 516 y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA--~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 516 LHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA--NTVDEYVERAVRLAEN 588 (631)
T ss_dssp HHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE--SSHHHHHHHHHHHHHC
T ss_pred HhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec--CCHHHHHHHHHHHhCC
Confidence 578888 543 3788999999999999999875321 1222233444 366542 22 3678888888899999
No 56
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.17 E-value=0.0072 Score=56.24 Aligned_cols=49 Identities=12% Similarity=0.060 Sum_probs=41.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCCCCCCCCe
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSK--GFSITIIHTNFNSPNPSNYPHF 63 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~~~~~~g~ 63 (460)
|||+++-..+.||+.-..++.++|+++ +.++++++.+.+.+.....+++
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~p~v 51 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAV 51 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTSTTE
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcCCCC
Confidence 799999999999999999999999997 9999999998666554444455
No 57
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.72 E-value=0.039 Score=55.08 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=90.5
Q ss_pred EEEEccccccCCHHHHHHHHHHHHc---CCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChh---hhhcc
Q 040486 276 IYVSFGSIAAINETEFLEVAWGLAN---SKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQ---EVLAH 349 (460)
Q Consensus 276 v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~---~~l~~ 349 (460)
+++..|.... .+.+..+++|+.+ .+.++++...+.. . ....-.......++++.+....+.. .+++.
T Consensus 329 ~i~~vgRl~~--~Kg~~~li~a~~~l~~~~~~l~l~G~G~~-~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 401 (536)
T 3vue_A 329 LIAFIGRLEE--QKGPDVMAAAIPELMQEDVQIVLLGTGKK-K----FEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAG 401 (536)
T ss_dssp EEEEECCBSG--GGCHHHHHHHHHHHTTSSCEEEEECCBCH-H----HHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHH
T ss_pred EEEEEeeccc--cCChHHHHHHHHHhHhhCCeEEEEeccCc-h----HHHHHHHHHhhcCCceEEEEeccHHHHHHHHHh
Confidence 4445676653 4445556666654 3455554433321 0 0001112233445666777777654 47888
Q ss_pred CCCccccccc---Cc-hhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCC---------ccCHHHHHHHHHHH
Q 040486 350 PATGGFWTHC---GW-NSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLER---------KLERGEVERTIRRV 416 (460)
Q Consensus 350 ~~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~---------~~~~~~l~~~i~~l 416 (460)
+|+ ||.-+ |. .+++||+++|+|+|+.. -......|.+. ..|..... ..+.+.|.++|+++
T Consensus 402 aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~----~gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ra 474 (536)
T 3vue_A 402 ADV--LAVPSRFEPCGLIQLQGMRYGTPCACAS----TGGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRA 474 (536)
T ss_dssp CSE--EEECCSCCSSCSHHHHHHHTTCCEEECS----CTHHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHH
T ss_pred hhe--eecccccCCCCHHHHHHHHcCCCEEEcC----CCCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHH
Confidence 998 77532 33 48999999999999854 44555666663 55653321 24678899999888
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 417 MTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 417 l~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
+.....+.+++. .+.++.+.-|=++.+++-++.+++
T Consensus 475 l~~~~~~~~~~~-------~~~am~~~fSW~~~A~~y~~ly~~ 510 (536)
T 3vue_A 475 IKVVGTPAYEEM-------VRNCMNQDLSWKGPAKNWENVLLG 510 (536)
T ss_dssp HHHTTSHHHHHH-------HHHHHHSCCSSHHHHHHHHHHHHT
T ss_pred HHhcCcHHHHHH-------HHHHHHhcCCHHHHHHHHHHHHHH
Confidence 752111433322 222233445555566666655544
No 58
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=94.92 E-value=0.096 Score=46.12 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=61.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeeEEecCCCCCCcccccccHHHHHH
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSN----YPHFTFCSIEDSLSETEASTADLVALLS 87 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (460)
..+||||+.---+. |.--+..|+++|.+ +|+|+++.|...+.-... ..-+++....++. ..-...+.+-..
T Consensus 9 ~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~---~~v~GTPaDCV~ 83 (261)
T 3ty2_A 9 TPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSLTLNAPLHIKNLENGM---ISVEGTPTDCVH 83 (261)
T ss_dssp --CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCCCCSSCEEEEECTTSC---EEESSCHHHHHH
T ss_pred CCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccceecCCCeEEEEecCCe---EEECCCHHHHHH
Confidence 45699998875444 44557888999977 899999999866543221 1235555543221 112233332222
Q ss_pred HHHHhcchhHHHHHHHHhcccccccCCCeeEEEecC----------CchhH---HHHHHHcCCceEEEecc
Q 040486 88 LLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDA----------TWYFT---QAVAESLKLSRIVLRTN 145 (460)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~----------~~~~~---~~~A~~lgiP~v~~~~~ 145 (460)
.. +..+.. .+||+||+.. ++.++ +.-|..+|||.|.++..
T Consensus 84 la-----------l~~l~~-------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 136 (261)
T 3ty2_A 84 LA-----------ITGVLP-------EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSLG 136 (261)
T ss_dssp HH-----------TTTTSS-------SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEEC
T ss_pred HH-----------HHHhcC-------CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEcC
Confidence 22 112222 4799999742 22222 22344579999998764
No 59
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=94.80 E-value=0.38 Score=42.17 Aligned_cols=111 Identities=11% Similarity=0.077 Sum_probs=64.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeeEEecCCCCCCcccccccHHHHHHHH
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSN----YPHFTFCSIEDSLSETEASTADLVALLSLL 89 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (460)
+||||+.---+. |.--+..|+++|.+.| +|+++.|...+.-... ..-+++..+..+.. ..-...+.+-....
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~--~~v~GTPaDCV~la 76 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTPADCVHLG 76 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCHHHHHHHH
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe--EEECCCHHHHHHHH
Confidence 489888864443 4455888999999988 9999999866543221 12355554433211 11223333222222
Q ss_pred HHhcchhHHHHHHHHhcccccccCCCeeEEEecC----------Cc---hhHHHHHHHcCCceEEEecc
Q 040486 90 NVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDA----------TW---YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~----------~~---~~~~~~A~~lgiP~v~~~~~ 145 (460)
+..+... .+||+||+.. ++ ..|+.-|..+|||.|.++..
T Consensus 77 -----------l~~l~~~------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 77 -----------YRVILEE------KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp -----------HHTTTTT------CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----------HHHhcCC------CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 2222211 3799999742 22 33455677789999998764
No 60
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=94.15 E-value=0.66 Score=40.63 Aligned_cols=110 Identities=7% Similarity=0.076 Sum_probs=62.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeeEEecCCCCC-CcccccccHHHHHHHH
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSN----YPHFTFCSIEDSLS-ETEASTADLVALLSLL 89 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 89 (460)
||||+.-=-+. |.--+..|+++|.+.| +|+++.|...+.-... ..-+++..++.+-. ....-...+.+-....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~la 78 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLA 78 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHHHH
Confidence 67777753333 3344788999999888 8999999866543221 12355555533200 0112223333322222
Q ss_pred HHhcchhHHHHHHHHhcccccccCCCeeEEEecC----------Cc---hhHHHHHHHcCCceEEEec
Q 040486 90 NVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDA----------TW---YFTQAVAESLKLSRIVLRT 144 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~----------~~---~~~~~~A~~lgiP~v~~~~ 144 (460)
+..+.. .+||+||+.. ++ ..|+.-|..+|||.|.++.
T Consensus 79 -----------l~~l~~-------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 79 -----------YNVVMD-------KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp -----------HHTTST-------TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred -----------HHhhcc-------CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 222222 4799999642 22 3445566779999999875
No 61
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=93.61 E-value=0.99 Score=39.44 Aligned_cols=108 Identities=9% Similarity=-0.003 Sum_probs=63.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCC----CCCCeeEEecCCCCC----CcccccccHHHHH
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPS----NYPHFTFCSIEDSLS----ETEASTADLVALL 86 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~----~~~g~~~~~~~~~~~----~~~~~~~~~~~~~ 86 (460)
||||+.-=-+. |.--+..|+++|.+.| +|+++.|...+.-.. -...+++..++.+.+ ....-...+.+-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDCV 78 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPADCV 78 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHHHH
Confidence 67777753333 3344788999999888 899999986654322 113466776643210 1122233443333
Q ss_pred HHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecC----------C---chhHHHHHHHcCCceEEEec
Q 040486 87 SLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDA----------T---WYFTQAVAESLKLSRIVLRT 144 (460)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~----------~---~~~~~~~A~~lgiP~v~~~~ 144 (460)
.... . +. .+||+||+.. + +..|+.-|..+|||.|.++.
T Consensus 79 ~lal-----------~-l~--------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 79 ALGL-----------H-LF--------GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHH-----------H-HS--------CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHH-----------c-CC--------CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 2221 1 22 4799999742 2 23445566779999999875
No 62
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=93.32 E-value=0.69 Score=41.34 Aligned_cols=110 Identities=8% Similarity=0.007 Sum_probs=62.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeeEEecCCCCCCcccccccHHHHHHHHH
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSN----YPHFTFCSIEDSLSETEASTADLVALLSLLN 90 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (460)
||||+.-=-+. +.--+..|+++|.+.| +|+++.|...+.-... ...+++..++.+-.....-...+.+-....
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~la- 77 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYLA- 77 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHHH-
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHHH-
Confidence 67777753333 3344788999999988 9999999866543221 123555554321001112223333222211
Q ss_pred HhcchhHHHHHHHHhcccccccCCCeeEEEec-----------CCc---hhHHHHHHHcCCceEEEecc
Q 040486 91 VQCVVPFRNCLAKLLSNVEEEEKEPIACLITD-----------ATW---YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D-----------~~~---~~~~~~A~~lgiP~v~~~~~ 145 (460)
+..+ . .+||+||+. .++ ..|+.-|..+|||.|.++..
T Consensus 78 ----------l~~l-~-------~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 78 ----------TFGL-G-------RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ----------HHHH-T-------SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ----------HhcC-C-------CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 2333 2 479999963 222 33445567799999999764
No 63
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=92.67 E-value=0.074 Score=53.08 Aligned_cols=43 Identities=12% Similarity=0.281 Sum_probs=30.5
Q ss_pred cCCCCCcEEEEEcC--------CCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 040486 9 IHQKKGRRLILFPL--------PLQGHINPMLQLANILYSKGFSITIIHTNFN 53 (460)
Q Consensus 9 ~~~~~~~~vl~~~~--------~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~ 53 (460)
++...+|||+++++ |+.|++ .-.|+++|+++||+|++++|.+.
T Consensus 4 ~~~~~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~Y~ 54 (536)
T 3vue_A 4 HHHHHHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPRYD 54 (536)
T ss_dssp ----CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEECCS
T ss_pred ccCCCCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecCch
Confidence 44567899999963 333444 55789999999999999997653
No 64
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=92.19 E-value=1.4 Score=38.70 Aligned_cols=111 Identities=11% Similarity=0.077 Sum_probs=60.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeeEEecCCCCCCcccccccHHHHHHHH
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSN----YPHFTFCSIEDSLSETEASTADLVALLSLL 89 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (460)
|+|||+.-=-+. +.--+..|+++|.+.| +|+++.|...+.-... ...+++....... ...-...+.+-....
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~--~~~v~GTPaDCV~la 76 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDF--YTVIDGTPADCVHLG 76 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTE--EEETTCCHHHHHHHH
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccc--eeecCCChHHHHhhh
Confidence 457777653332 3334778899999999 5999988765543221 1234444432110 001122332222111
Q ss_pred HHhcchhHHHHHHHHhcccccccCCCeeEEEec----------CCc---hhHHHHHHHcCCceEEEecc
Q 040486 90 NVQCVVPFRNCLAKLLSNVEEEEKEPIACLITD----------ATW---YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D----------~~~---~~~~~~A~~lgiP~v~~~~~ 145 (460)
+..+... .+||+||+. .++ ..|+.-|..+|||.|.++..
T Consensus 77 -----------l~~~l~~------~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 77 -----------YRVILEE------KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp -----------HHTTTTT------CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----------hhhhcCC------CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 2222211 479999983 222 44566677899999998753
No 65
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=91.72 E-value=1.5 Score=38.60 Aligned_cols=107 Identities=12% Similarity=0.111 Sum_probs=60.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC----CCCeeEEecCCCCCCccccc-ccHHHHHHHH
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSN----YPHFTFCSIEDSLSETEAST-ADLVALLSLL 89 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (460)
||||+.-=-+. |.--+..|+++|.+.| +|+++.|...+.-... ..-++...+.. ....-. ..+.+-....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~~---~~~~v~~GTPaDCV~la 76 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSLTLESSLRTFTFDN---GDIAVQMGTPTDCVYLG 76 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCCCSSCCEEEECTT---SCEEEETCCHHHHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCcCCCCCeEEEEeCC---CCeEECCCCHHHHHHHH
Confidence 78887764443 4445788899998876 9999999866543221 12355554421 112222 3443333222
Q ss_pred HHhcchhHHHHHHHHhcccccccCCCeeEEEecC----------Cchh---HHHHHHHcCCceEEEec
Q 040486 90 NVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDA----------TWYF---TQAVAESLKLSRIVLRT 144 (460)
Q Consensus 90 ~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~----------~~~~---~~~~A~~lgiP~v~~~~ 144 (460)
+..+.. .+||+||+.. ++.. |+.-|..+|||.|.++.
T Consensus 77 -----------l~~ll~-------~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 77 -----------VNALMR-------PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp -----------HHTTSS-------SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred -----------HhhccC-------CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 222222 4799999742 2222 33344558999999875
No 66
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=87.61 E-value=2.2 Score=43.27 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=29.8
Q ss_pred cccCh---------hhhhccCCCccccccc---Cc-hhHHHHHhhCCceecccc
Q 040486 339 KWAPQ---------QEVLAHPATGGFWTHC---GW-NSTLESICEGVPMICQPC 379 (460)
Q Consensus 339 ~~vp~---------~~~l~~~~~~~~I~Hg---G~-gs~~eal~~GvP~v~~P~ 379 (460)
.|++. .++++.+++ ||.-+ |+ .+.+||+++|+|+|+.-.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCC
Confidence 67765 357889999 77543 44 589999999999998544
No 67
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=85.17 E-value=4.1 Score=39.73 Aligned_cols=105 Identities=15% Similarity=0.131 Sum_probs=65.9
Q ss_pred ccccChh---hhhccCCCccccc---ccCch-hHHHHHhhCC-----ceeccccccchhhhHHHHhhhhcceeeeCCccC
Q 040486 338 VKWAPQQ---EVLAHPATGGFWT---HCGWN-STLESICEGV-----PMICQPCFGDQMVNARYVSDVWKVGLHLERKLE 405 (460)
Q Consensus 338 ~~~vp~~---~~l~~~~~~~~I~---HgG~g-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~ 405 (460)
.+++++. ++++.+|+ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ .-|..+++ .+
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~p-~d 405 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVNP-YD 405 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEECT-TC
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEECC-CC
Confidence 4778875 47788998 765 33564 8999999998 666543322 11112 12445555 67
Q ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHc
Q 040486 406 RGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYILS 459 (460)
Q Consensus 406 ~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 459 (460)
.+.++++|.++|++.+ ..-+++.+++.+.++ + -+..+.++.+++.+++
T Consensus 406 ~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~----~-~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 406 RDEVAAALDRALTMSL-AERISRHAEMLDVIV----K-NDINHWQECFISDLKQ 453 (482)
T ss_dssp HHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHH----H-TCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH----h-CCHHHHHHHHHHHHHh
Confidence 8999999999998521 122333444444443 3 4677788888887764
No 68
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=84.55 E-value=1.4 Score=34.63 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=30.7
Q ss_pred CCCCcEEEEE-cCCC-ccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 11 QKKGRRLILF-PLPL-QGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 11 ~~~~~~vl~~-~~~~-~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..+-||++++ -.|. .-.+--.+-++..|.++||+|++++++
T Consensus 3 ~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~np 45 (157)
T 1kjn_A 3 TESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANP 45 (157)
T ss_dssp ---CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred cccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCH
Confidence 3456887765 4554 466666889999999999999999997
No 69
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=81.93 E-value=19 Score=29.11 Aligned_cols=142 Identities=14% Similarity=0.136 Sum_probs=81.4
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCC
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPA 351 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~ 351 (460)
-+|.|-|-+||.+ .-...++....++.++..+-..+.+ ...+|+.+.+ |+.+.+ -+..+
T Consensus 10 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~~----------~~~~a~-~~g~~ 68 (170)
T 1xmp_A 10 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVS--------AHRTPDYMFE----------YAETAR-ERGLK 68 (170)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHH----------HHHHTT-TTTCC
T ss_pred CCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEe--------ccCCHHHHHH----------HHHHHH-hCCCc
Confidence 3566888899877 4566777888888888775544443 2336665421 111100 01234
Q ss_pred CcccccccCch----hHHHHHhhCCceeccccccc--hhhhH-HHHhh--hhccee---eeCC--ccCHHHHHHHHHHHh
Q 040486 352 TGGFWTHCGWN----STLESICEGVPMICQPCFGD--QMVNA-RYVSD--VWKVGL---HLER--KLERGEVERTIRRVM 417 (460)
Q Consensus 352 ~~~~I~HgG~g----s~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~--~~G~g~---~~~~--~~~~~~l~~~i~~ll 417 (460)
+ +|.=+|.- ++..++ .-+|+|.+|.... +...+ .-+.+ . |+.+ .++. ..++..++..|. -+
T Consensus 69 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~ 143 (170)
T 1xmp_A 69 V--IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GS 143 (170)
T ss_dssp E--EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HT
T ss_pred E--EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-cc
Confidence 4 77766642 333333 3579999998542 22222 22333 2 5542 1221 356666776665 45
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHhc
Q 040486 418 TEAEGQEIRVRIMILKEKLNLCLIQ 442 (460)
Q Consensus 418 ~~~~~~~~~~~a~~~~~~~~~~~~~ 442 (460)
.| +.++++.+.++++.++...+
T Consensus 144 ~d---~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 144 FH---DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp TC---HHHHHHHHHHHHHHHHHHHC
T ss_pred CC---HHHHHHHHHHHHHHHHHHHh
Confidence 77 89999999999988865433
No 70
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=81.14 E-value=21 Score=29.20 Aligned_cols=142 Identities=15% Similarity=0.149 Sum_probs=81.9
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCC
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPA 351 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~ 351 (460)
.-|.|-|-+||.+ .....++....++.++.+.-..+.+ ...+|+.+.+ ++.+.+ =+.++
T Consensus 12 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~~----------~~~~a~-~~g~~ 70 (183)
T 1o4v_A 12 HVPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVS--------AHRTPDRMFE----------YAKNAE-ERGIE 70 (183)
T ss_dssp --CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHHH----------HHHHTT-TTTCC
T ss_pred CCCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHHH----------HHHHHH-hCCCc
Confidence 4567888899877 4566777888888888775444443 2346665521 111100 01234
Q ss_pred CcccccccCc----hhHHHHHhhCCceeccccccc--hhhhH-HHHhhhh--cceeee---CCccCHHHHHHHHHHHhcc
Q 040486 352 TGGFWTHCGW----NSTLESICEGVPMICQPCFGD--QMVNA-RYVSDVW--KVGLHL---ERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 352 ~~~~I~HgG~----gs~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~~~--G~g~~~---~~~~~~~~l~~~i~~ll~~ 419 (460)
+ +|.=+|. .++..++ .-+|+|.+|.... ....+ .-+.+ + |+.+.. +...++..++..|. -+.|
T Consensus 71 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivq-mP~GvpVatV~Id~~~nAa~lAaqIl-a~~d 145 (183)
T 1o4v_A 71 V--IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIVQ-MPGGVPVATVAINNAKNAGILAASIL-GIKY 145 (183)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTCCCEECCTTCHHHHHHHHHHHH-HTTC
T ss_pred E--EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhc-CCCCCeeEEEecCCchHHHHHHHHHH-hcCC
Confidence 4 7776663 3444444 6789999998542 22222 22344 4 543222 22566677776665 4467
Q ss_pred chHHHHHHHHHHHHHHHHHHHhc
Q 040486 420 AEGQEIRVRIMILKEKLNLCLIQ 442 (460)
Q Consensus 420 ~~~~~~~~~a~~~~~~~~~~~~~ 442 (460)
+.++++.+.+++...+...+
T Consensus 146 ---~~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 146 ---PEIARKVKEYKERMKREVLE 165 (183)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHH
Confidence 78888888888877765433
No 71
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=80.76 E-value=8.4 Score=37.56 Aligned_cols=109 Identities=9% Similarity=0.013 Sum_probs=69.6
Q ss_pred CCccccccChh---hhhccCCCccccc---ccCch-hHHHHHhhC---CceeccccccchhhhHHHHhhhhcceeeeCCc
Q 040486 334 RGHMVKWAPQQ---EVLAHPATGGFWT---HCGWN-STLESICEG---VPMICQPCFGDQMVNARYVSDVWKVGLHLERK 403 (460)
Q Consensus 334 ~~~v~~~vp~~---~~l~~~~~~~~I~---HgG~g-s~~eal~~G---vP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~ 403 (460)
.+++.+.+|+. ++++.+++ |+. .=|+| +..|++++| .|+|+--+.+ .+..+. .-|+.+.+
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 45566778874 57778888 654 45887 568999996 5655533322 222221 23666766
Q ss_pred cCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 040486 404 LERGEVERTIRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYIL 458 (460)
Q Consensus 404 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 458 (460)
.+.+.++++|.++|++.. ..-+++.+++.+.++ .-....-++.+++.|.
T Consensus 423 ~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~ 471 (496)
T 3t5t_A 423 FDLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLA 471 (496)
T ss_dssp TBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHh
Confidence 789999999999998521 234555555555554 4556667777777765
No 72
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=78.40 E-value=32 Score=30.04 Aligned_cols=38 Identities=11% Similarity=0.122 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 12 KKGRRLILFPLP--LQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 12 ~~~~~vl~~~~~--~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
.++|+.+|++.. ..|=..-.+.|++.|.++|++|.++=
T Consensus 23 ~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 23 QSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp CSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 356777776533 55888889999999999999999974
No 73
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=78.00 E-value=9.9 Score=31.65 Aligned_cols=37 Identities=24% Similarity=0.535 Sum_probs=30.3
Q ss_pred cEEEEE--cCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILF--PLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~--~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
||++.+ +-|+-|-..-...||..|+++|++|.++-.+
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 555544 3567788889999999999999999999775
No 74
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=77.75 E-value=29 Score=30.06 Aligned_cols=37 Identities=11% Similarity=0.120 Sum_probs=30.0
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 13 KGRRLILFPL--PLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 13 ~~~~vl~~~~--~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
.++|.+|++. ...|=..-.+.|++.|.++|.+|.++=
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 4677777753 355888889999999999999999983
No 75
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=76.34 E-value=9.5 Score=31.95 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=62.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC------CCCCCCCCeeEEecCCCCCCcccccccHHHHH
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNS------PNPSNYPHFTFCSIEDSLSETEASTADLVALL 86 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
++-.|.+++..+.|-....+.+|-..+.+|+.|.|+..-... ...... +++++....++... ..+..+.
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L-~v~~~~~g~gf~~~---~~~~~~~- 101 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH-GVEFQVMATGFTWE---TQNREAD- 101 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG-TCEEEECCTTCCCC---GGGHHHH-
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC-CcEEEEcccccccC---CCCcHHH-
Confidence 456788888888999999999999999999999999554321 112233 58888777654321 1111111
Q ss_pred HHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCc
Q 040486 87 SLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATW 125 (460)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~ 125 (460)
.......+....+.+.+ .++|+||.|.+.
T Consensus 102 ---~~~a~~~l~~a~~~l~~-------~~yDlvILDEi~ 130 (196)
T 1g5t_A 102 ---TAACMAVWQHGKRMLAD-------PLLDMVVLDELT 130 (196)
T ss_dssp ---HHHHHHHHHHHHHHTTC-------TTCSEEEEETHH
T ss_pred ---HHHHHHHHHHHHHHHhc-------CCCCEEEEeCCC
Confidence 11223334444444433 479999999864
No 76
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=74.74 E-value=3.9 Score=34.37 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=31.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSK-GFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~-Gh~Vt~~~~~ 51 (460)
|||++.-.|+.|-+. ...+.+.|.++ |++|.++.++
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECc
Confidence 689888888887766 89999999999 9999999886
No 77
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=74.47 E-value=3.6 Score=34.94 Aligned_cols=37 Identities=16% Similarity=0.152 Sum_probs=33.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++||++.-.|+.|-+. ...|.+.|.++|++|.++.++
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECc
Confidence 4789988888888777 899999999999999999886
No 78
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=73.62 E-value=35 Score=27.70 Aligned_cols=139 Identities=14% Similarity=0.163 Sum_probs=78.9
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCC
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPA 351 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~ 351 (460)
.++.|-|-+||.+ .....++....++.++..+-..+.+ ...+|+.+. .|+-.. --+..+
T Consensus 6 ~~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~S--------aHR~p~~~~----------~~~~~a-~~~g~~ 64 (174)
T 3lp6_A 6 ERPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVS--------AHRTPEAMF----------SYARGA-AARGLE 64 (174)
T ss_dssp CCCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHH----------HHHHHH-HHHTCC
T ss_pred CCCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEC--------CCCCHHHHH----------HHHHHH-HhCCCC
Confidence 3455777788877 3466777888888888776554443 234666552 111111 112345
Q ss_pred CcccccccCc----hhHHHHHhhCCceeccccccchh--hhH-HHHhhhh--cc--eeee-CCccCHHHHHHHHHHHhcc
Q 040486 352 TGGFWTHCGW----NSTLESICEGVPMICQPCFGDQM--VNA-RYVSDVW--KV--GLHL-ERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 352 ~~~~I~HgG~----gs~~eal~~GvP~v~~P~~~DQ~--~na-~~v~~~~--G~--g~~~-~~~~~~~~l~~~i~~ll~~ 419 (460)
+ +|.=+|. .++..++ .-+|+|.+|...-.. ..+ .-+.+ + |+ +... +...++..++..|..+ .|
T Consensus 65 V--iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vq-mp~GvpVatV~I~~~~nAa~lAa~Il~~-~d 139 (174)
T 3lp6_A 65 V--IIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQ-MPAGVPVATVSIGGAGNAGLLAVRMLGA-AN 139 (174)
T ss_dssp E--EEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHC-CCTTCCCEECCTTCHHHHHHHHHHHHHT-TC
T ss_pred E--EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCeeEEEEcCcchHHHHHHHHHHhC-CC
Confidence 5 7877663 3444433 568999999863211 111 12233 2 32 2221 1245666666666443 67
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 040486 420 AEGQEIRVRIMILKEKLNLC 439 (460)
Q Consensus 420 ~~~~~~~~~a~~~~~~~~~~ 439 (460)
+.++++.+.++++.++.
T Consensus 140 ---~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 140 ---PQLRARIVAFQDRLADV 156 (174)
T ss_dssp ---HHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHH
Confidence 78999999888888753
No 79
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=71.87 E-value=6.6 Score=33.09 Aligned_cols=45 Identities=13% Similarity=0.029 Sum_probs=35.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNP 57 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~ 57 (460)
+++||++.-.|+.|-+.-.+.+.+.|.++|++|.++.++......
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i 50 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQTTD 50 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTT
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHH
Confidence 457899888888544437899999999999999999997544433
No 80
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=71.46 E-value=5.6 Score=31.19 Aligned_cols=39 Identities=15% Similarity=0.154 Sum_probs=35.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++.||++.+.++-+|-....-++..|..+|++|.+....
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~ 40 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVL 40 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCC
Confidence 457899999898899999999999999999999988764
No 81
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=70.84 E-value=39 Score=27.03 Aligned_cols=136 Identities=11% Similarity=0.071 Sum_probs=76.4
Q ss_pred eEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCc
Q 040486 274 SVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATG 353 (460)
Q Consensus 274 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~ 353 (460)
+.|-|-+||.+ .....++....++.++..+-..+.+ ...+|+.+. .|+...+--...++
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~s--------aHR~p~~~~----------~~~~~a~~~~~~~V- 61 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGS--------AHKTAEHVV----------SMLKEYEALDRPKL- 61 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHH----------HHHHHHHTSCSCEE-
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc--------ccCCHHHHH----------HHHHHhhhcCCCcE-
Confidence 34667788866 3466777888888888775544443 234666552 11111110001344
Q ss_pred ccccccCc----hhHHHHHhhCCceecccccc---chhhhHHHHhhhh--cceee-eCCccCHHHHHHHHHHHhccchHH
Q 040486 354 GFWTHCGW----NSTLESICEGVPMICQPCFG---DQMVNARYVSDVW--KVGLH-LERKLERGEVERTIRRVMTEAEGQ 423 (460)
Q Consensus 354 ~~I~HgG~----gs~~eal~~GvP~v~~P~~~---DQ~~na~~v~~~~--G~g~~-~~~~~~~~~l~~~i~~ll~~~~~~ 423 (460)
+|.=+|. .++..++ .-+|+|.+|... +-.+ -.-+.+ + |+.+. ++...++..++..|.. ++| +
T Consensus 62 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~d-LlS~vq-mp~GvpVatv~~~~nAa~lA~~Il~-~~d---~ 133 (159)
T 3rg8_A 62 -YITIAGRSNALSGFVDGF-VKGATIACPPPSDSFAGAD-IYSSLR-MPSGISPALVLEPKNAALLAARIFS-LYD---K 133 (159)
T ss_dssp -EEEECCSSCCHHHHHHHH-SSSCEEECCCCCCGGGGTH-HHHHHC-CCTTCCCEECCSHHHHHHHHHHHHT-TTC---H
T ss_pred -EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCcc-HHHHHh-CCCCCceEEecCchHHHHHHHHHHh-CCC---H
Confidence 8877764 3444333 568999999743 2222 222222 2 44432 2224566666655543 367 7
Q ss_pred HHHHHHHHHHHHHHH
Q 040486 424 EIRVRIMILKEKLNL 438 (460)
Q Consensus 424 ~~~~~a~~~~~~~~~ 438 (460)
.++++.+.++++..+
T Consensus 134 ~l~~kl~~~r~~~~~ 148 (159)
T 3rg8_A 134 EIADSVKSYMESNAQ 148 (159)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 889988888887764
No 82
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=70.71 E-value=5.2 Score=32.92 Aligned_cols=39 Identities=15% Similarity=0.074 Sum_probs=32.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNS 54 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~ 54 (460)
+||++.-.|+.|=+. ...+.+.|.++|++|.++.++...
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHH
Confidence 689888888877665 889999999999999999997433
No 83
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=70.65 E-value=6.1 Score=32.96 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=32.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+||++.-.|+.|-+ -...+.+.|.++|++|.++.++.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~ 38 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRN 38 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChh
Confidence 58998888888855 57999999999999999998863
No 84
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=69.20 E-value=4.9 Score=36.09 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||++. |+.|-+- -.|++.|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 887765 4556554 4578999999999999864
No 85
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=68.65 E-value=8 Score=34.54 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=25.5
Q ss_pred CCCcEEEEE-cCCCccCHHHHH--HHHHHHHhCCCeEEEEe
Q 040486 12 KKGRRLILF-PLPLQGHINPML--QLANILYSKGFSITIIH 49 (460)
Q Consensus 12 ~~~~~vl~~-~~~~~GH~~p~l--~La~~L~~~Gh~Vt~~~ 49 (460)
+.+|||+++ ..|-..-.+-.+ .+.+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 567999866 566555454433 45778888999999973
No 86
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=67.75 E-value=43 Score=32.17 Aligned_cols=87 Identities=14% Similarity=0.109 Sum_probs=52.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcccccccHHHHHHHHHHhc
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETEASTADLVALLSLLNVQC 93 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (460)
..|++++.. -.-.+.+++.|.+-|.+|..+.+........+.. .......|..
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~~------------~~~v~~~D~~---------- 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDSP------------LPSVRVGDLE---------- 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTTT------------SSCEEESHHH----------
T ss_pred CCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhCc------------cCcEEeCCHH----------
Confidence 478888543 3455788899989999999988764322211110 0000011111
Q ss_pred chhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEE
Q 040486 94 VVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVL 142 (460)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~ 142 (460)
.+++.++. .+||++|.+.. ...+|+++|||++.+
T Consensus 366 --~le~~i~~----------~~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 --DLEHAARA----------GQAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp --HHHHHHHH----------HTCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred --HHHHHHHh----------cCCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 12223333 36999999853 567999999999985
No 87
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=67.13 E-value=19 Score=31.27 Aligned_cols=37 Identities=11% Similarity=0.064 Sum_probs=27.6
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHI-NPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~-~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+++-..+.-++ ..+...++.++.-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 79998855555555 56677888887778888888765
No 88
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=66.10 E-value=6 Score=33.53 Aligned_cols=40 Identities=13% Similarity=0.069 Sum_probs=31.5
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCCC
Q 040486 13 KGRRLILFPLPLQGHINP-MLQLANILYSKGFSITIIHTNFN 53 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p-~l~La~~L~~~Gh~Vt~~~~~~~ 53 (460)
+++||++.-.|+. ...- ...+.+.|.++|++|.++.++..
T Consensus 4 ~~k~IllgiTGsi-aayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 4 KGKRIGFGFTGSH-CTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp TTCEEEEEECSCG-GGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCCEEEEEEEChH-HHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 4578988877774 4554 88999999999999999999643
No 89
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=65.70 E-value=19 Score=31.09 Aligned_cols=26 Identities=27% Similarity=0.429 Sum_probs=21.2
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 25 QGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 25 ~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
.|. --.++|++|+++|++|++++.+.
T Consensus 28 SG~--mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGH--LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCH--HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCH--HHHHHHHHHHHCCCEEEEEeCCc
Confidence 554 35678999999999999998864
No 90
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=65.56 E-value=44 Score=31.54 Aligned_cols=36 Identities=11% Similarity=0.071 Sum_probs=24.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
....||+++..+.... .+.++.++.|++|+++.+..
T Consensus 3 ~~~k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 3 KRNKNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp CCCCEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEETT
T ss_pred CCCcEEEEECCChhHH-----HHHHHHHHCCCEEEEEECCC
Confidence 3457888887544321 35678888899999987643
No 91
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=65.37 E-value=9.4 Score=29.69 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=30.4
Q ss_pred CCcEEEEE-cCC--CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILF-PLP--LQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~-~~~--~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.++|++|+ ..+ +.......+.+|...++.||+|+++.+.
T Consensus 14 ~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 14 QXXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred ccceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 45677755 455 4567778888999999999999998775
No 92
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=65.35 E-value=7.8 Score=32.85 Aligned_cols=42 Identities=12% Similarity=0.062 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPN 56 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~ 56 (460)
+++||++...|+.+-+. ...|.+.|.++| +|.++.++...+.
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~f 59 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHF 59 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGT
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHh
Confidence 35799999889988776 899999999999 9999999754433
No 93
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=63.92 E-value=59 Score=26.57 Aligned_cols=141 Identities=9% Similarity=0.097 Sum_probs=81.3
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCC
Q 040486 273 KSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPAT 352 (460)
Q Consensus 273 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~ 352 (460)
.+.|-|-+||.+ .-...++....++.++..+-..+.+ ...+|+.+.+ |+.+.+ -+..++
T Consensus 21 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~S--------aHR~p~~l~~----------~~~~a~-~~g~~V 79 (182)
T 1u11_A 21 APVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVS--------AHRTPDRLAD----------YARTAA-ERGLNV 79 (182)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHH----------HHHHTT-TTTCCE
T ss_pred CCEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHHH----------HHHHHH-hCCCcE
Confidence 345777788877 4566777888888888775544443 2346665421 111100 012344
Q ss_pred cccccccCc----hhHHHHHhhCCceeccccccc--hhhhH-HHHhh--hhcceee---eCC--ccCHHHHHHHHHHHhc
Q 040486 353 GGFWTHCGW----NSTLESICEGVPMICQPCFGD--QMVNA-RYVSD--VWKVGLH---LER--KLERGEVERTIRRVMT 418 (460)
Q Consensus 353 ~~~I~HgG~----gs~~eal~~GvP~v~~P~~~D--Q~~na-~~v~~--~~G~g~~---~~~--~~~~~~l~~~i~~ll~ 418 (460)
+|.=+|. .++..++ .-+|+|.+|.... ....+ .-+.+ . |+.+. ++. ..+...++..|. -+.
T Consensus 80 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~ 154 (182)
T 1u11_A 80 --IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALY 154 (182)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGG
T ss_pred --EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccC
Confidence 7776663 3444444 4789999998542 12221 22333 3 55522 221 356666666664 346
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhc
Q 040486 419 EAEGQEIRVRIMILKEKLNLCLIQ 442 (460)
Q Consensus 419 ~~~~~~~~~~a~~~~~~~~~~~~~ 442 (460)
| +.++++.+.++++.++...+
T Consensus 155 d---~~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 155 N---PALAARLETWRALQTASVPN 175 (182)
T ss_dssp C---HHHHHHHHHHHHHHHHHSCS
T ss_pred C---HHHHHHHHHHHHHHHHHHHH
Confidence 7 89999999999988865433
No 94
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=63.18 E-value=13 Score=29.10 Aligned_cols=44 Identities=18% Similarity=0.308 Sum_probs=29.4
Q ss_pred cCCCCCcEEEEE-cCCCccCHHH--HHHHHHHHHhCCCeE-EEEeCCC
Q 040486 9 IHQKKGRRLILF-PLPLQGHINP--MLQLANILYSKGFSI-TIIHTNF 52 (460)
Q Consensus 9 ~~~~~~~~vl~~-~~~~~GH~~p--~l~La~~L~~~Gh~V-t~~~~~~ 52 (460)
++.-..||++|+ +.+-+|+-.. .+.+|+++.+.||+| .++-...
T Consensus 7 ~~~~~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 7 HHHHGSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp ----CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred cccCCceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 333445788655 6666666555 577799999999999 8776653
No 95
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=62.93 E-value=61 Score=26.41 Aligned_cols=139 Identities=14% Similarity=0.134 Sum_probs=79.0
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCC
Q 040486 273 KSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPAT 352 (460)
Q Consensus 273 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~ 352 (460)
+|.|-|-+||.+. -...++..+.|++++..+-..+... ...|+.+. +|+-. .....+
T Consensus 22 kp~V~IimGS~SD--~~v~~~a~~~L~~~gI~~e~~V~SA--------HRtp~~l~----------~~~~~---a~~~g~ 78 (181)
T 4b4k_A 22 KSLVGVIMGSTSD--WETMKYACDILDELNIPYEKKVVSA--------HRTPDYMF----------EYAET---ARERGL 78 (181)
T ss_dssp CCSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECCT--------TTSHHHHH----------HHHHH---TTTTTC
T ss_pred CccEEEEECCHhH--HHHHHHHHHHHHHcCCCeeEEEEcc--------ccChHHHH----------HHHHH---HHhcCc
Confidence 5678888999774 4667788899999887765554432 33555442 11111 111123
Q ss_pred cccccccCch----hHHHHHhhCCceeccccccc---hhhhHHHHhhhhcceeeeCC-c------cCHHHHHHHHHHHhc
Q 040486 353 GGFWTHCGWN----STLESICEGVPMICQPCFGD---QMVNARYVSDVWKVGLHLER-K------LERGEVERTIRRVMT 418 (460)
Q Consensus 353 ~~~I~HgG~g----s~~eal~~GvP~v~~P~~~D---Q~~na~~v~~~~G~g~~~~~-~------~~~~~l~~~i~~ll~ 418 (460)
+++|.=.|.- ++..+ ..-+|+|.+|.... -.+.-.-+.+ +--|+-+-. . .|+.-++..|-. +.
T Consensus 79 ~ViIa~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa-~~ 155 (181)
T 4b4k_A 79 KVIIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILG-SF 155 (181)
T ss_dssp CEEEEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHT-TT
T ss_pred eEEEEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHc-cC
Confidence 3377665532 33322 45679999999643 3333344555 444543322 1 233334444422 35
Q ss_pred cchHHHHHHHHHHHHHHHHHHH
Q 040486 419 EAEGQEIRVRIMILKEKLNLCL 440 (460)
Q Consensus 419 ~~~~~~~~~~a~~~~~~~~~~~ 440 (460)
| +.++++.+.+++.+++..
T Consensus 156 d---~~l~~kl~~~r~~~~~~v 174 (181)
T 4b4k_A 156 H---DDIHDALELRREAIEKDV 174 (181)
T ss_dssp C---HHHHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHHH
Confidence 7 789999988888887543
No 96
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=61.73 E-value=6.7 Score=31.14 Aligned_cols=34 Identities=15% Similarity=0.227 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+.||+++-. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4578888843 5444 67899999999999999874
No 97
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=60.43 E-value=7.3 Score=32.23 Aligned_cols=40 Identities=10% Similarity=0.033 Sum_probs=32.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSP 55 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~ 55 (460)
.||++.-.|+.|=+ -...+.+.|.++|++|.++.++...+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~ 42 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKN 42 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHH
Confidence 57888877787766 67899999999999999999874443
No 98
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=59.25 E-value=14 Score=28.38 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=28.4
Q ss_pred cEEEEE-cCCCcc--CHHHHHHHHHHHHhCCCeE-EEEeCCCC
Q 040486 15 RRLILF-PLPLQG--HINPMLQLANILYSKGFSI-TIIHTNFN 53 (460)
Q Consensus 15 ~~vl~~-~~~~~G--H~~p~l~La~~L~~~Gh~V-t~~~~~~~ 53 (460)
||++++ +.+-+| .....+.+|.++.+.||+| +++-....
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dG 43 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDG 43 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechH
Confidence 566554 554454 4566789999999999999 88877643
No 99
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=58.91 E-value=20 Score=30.24 Aligned_cols=44 Identities=9% Similarity=-0.077 Sum_probs=32.0
Q ss_pred ccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEE
Q 040486 264 ISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLW 307 (460)
Q Consensus 264 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~ 307 (460)
.+|+.....+.++||..+|......+....+.++++++|+.+.+
T Consensus 19 ~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 19 TEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 44553334578999998876545567788899999999987554
No 100
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=58.47 E-value=6.8 Score=32.82 Aligned_cols=39 Identities=13% Similarity=0.029 Sum_probs=33.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
++.||++...|+.|-+. ...+.+.|.++|++|.++.++.
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~ 45 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKT 45 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchh
Confidence 45789988888887775 7899999999999999998863
No 101
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=57.63 E-value=9.6 Score=30.77 Aligned_cols=39 Identities=18% Similarity=0.297 Sum_probs=35.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+.||++.+.++-.|-....-++..|..+|++|.+....
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~ 55 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLR 55 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSB
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 568999999999999999999999999999999998664
No 102
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=57.45 E-value=17 Score=31.59 Aligned_cols=40 Identities=13% Similarity=0.297 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCc----------cC-HHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQ----------GH-INPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~----------GH-~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|+++||+++..... |- ..=++.....|.++|++|+++++.
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34678988866432 21 234777788999999999999985
No 103
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=56.86 E-value=10 Score=32.14 Aligned_cols=45 Identities=9% Similarity=0.100 Sum_probs=33.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCCCCCCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYS-KGFSITIIHTNFNSPNP 57 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~-~Gh~Vt~~~~~~~~~~~ 57 (460)
..++||++...|+.+-+. ...+++.|.+ +|++|.++.++...+..
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 345789988888887555 5899999999 89999999997544433
No 104
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=56.29 E-value=13 Score=33.01 Aligned_cols=48 Identities=15% Similarity=0.156 Sum_probs=31.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEec
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSI 68 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~ 68 (460)
|++|||+++ |+ |-+ -..|++.|.++||+|+.++-.... .. .+++++..
T Consensus 1 M~~~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r~~~~--~~--~~~~~~~~ 48 (286)
T 3gpi_A 1 MSLSKILIA--GC-GDL--GLELARRLTAQGHEVTGLRRSAQP--MP--AGVQTLIA 48 (286)
T ss_dssp -CCCCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEECTTSC--CC--TTCCEEEC
T ss_pred CCCCcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeCCccc--cc--cCCceEEc
Confidence 346788877 34 643 457899999999999998764221 11 45666644
No 105
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=55.32 E-value=82 Score=25.50 Aligned_cols=141 Identities=15% Similarity=0.123 Sum_probs=78.6
Q ss_pred eEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCc
Q 040486 274 SVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATG 353 (460)
Q Consensus 274 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~ 353 (460)
+.|-|-+||.+ .....++....++.++..+-..+.+ ...+|+.+.+ ++... --+..++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~S--------aHR~p~~~~~----------~~~~a-~~~g~~V- 70 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVS--------AHRTPDRLFS----------FAEQA-EANGLHV- 70 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHHH----------HHHHT-TTTTCSE-
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEc--------ccCCHHHHHH----------HHHHH-HhCCCcE-
Confidence 34677788876 3466777888888988776555443 2346665521 11100 0122344
Q ss_pred ccccccCc-h---hHHHHHhhCCceeccccccc-hhhhH--HHHhhhh--cc--eee-eCC--ccCHHHHHHHHHHHhcc
Q 040486 354 GFWTHCGW-N---STLESICEGVPMICQPCFGD-QMVNA--RYVSDVW--KV--GLH-LER--KLERGEVERTIRRVMTE 419 (460)
Q Consensus 354 ~~I~HgG~-g---s~~eal~~GvP~v~~P~~~D-Q~~na--~~v~~~~--G~--g~~-~~~--~~~~~~l~~~i~~ll~~ 419 (460)
+|.=+|. + ++..+ ..-+|+|.+|...- -.... .-+.+ + |+ +.. ++. ..+...++..|.. +.|
T Consensus 71 -iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vq-mP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d 146 (174)
T 3kuu_A 71 -IIAGNGGAAHLPGMLAA-KTLVPVLGVPVQSAALSGVDSLYSIVQ-MPRGIPVGTLAIGKAGAANAALLAAQILA-LHD 146 (174)
T ss_dssp -EEEEEESSCCHHHHHHH-TCSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTC
T ss_pred -EEEECChhhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHhhh-CCCCCeeEEEEeCCccchHHHHHHHHHHc-CCC
Confidence 7777664 2 33333 23579999998542 11111 22222 2 43 211 221 2455566655543 467
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcC
Q 040486 420 AEGQEIRVRIMILKEKLNLCLIQG 443 (460)
Q Consensus 420 ~~~~~~~~~a~~~~~~~~~~~~~~ 443 (460)
+.++++.+.+++++++...+.
T Consensus 147 ---~~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 147 ---TELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHHHHHHHhC
Confidence 899999999999888655443
No 106
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=54.97 E-value=13 Score=32.57 Aligned_cols=40 Identities=23% Similarity=0.141 Sum_probs=33.3
Q ss_pred CCCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLP---LQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~---~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+..||.+|++.| +.|--.-...|+..|..||+.||..=-+
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 567999999977 4577788999999999999999998554
No 107
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=54.78 E-value=26 Score=30.54 Aligned_cols=38 Identities=21% Similarity=0.308 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCc----------cC-HHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQ----------GH-INPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~----------GH-~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++||+++..... |- ..=++.-...|.++|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 578988865532 22 444777789999999999999985
No 108
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=54.71 E-value=15 Score=31.04 Aligned_cols=39 Identities=18% Similarity=0.108 Sum_probs=35.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+.+|++.+.++-.|-....-++..|..+|++|.++...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~ 125 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVD 125 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSS
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 457999999999999999999999999999999998764
No 109
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.07 E-value=8 Score=30.08 Aligned_cols=34 Identities=12% Similarity=0.080 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+++||+++-. |.+ ...+|+.|.++||+|+++...
T Consensus 5 ~~~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 3568888865 433 467899999999999998764
No 110
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=53.99 E-value=84 Score=25.19 Aligned_cols=138 Identities=12% Similarity=0.102 Sum_probs=77.3
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCC
Q 040486 273 KSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPAT 352 (460)
Q Consensus 273 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~ 352 (460)
++.|-|-+||.+ .....++....++.++...-..+.+ ...+|+.+.+ |+... --+..++
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHR~p~~~~~----------~~~~a-~~~g~~V 61 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVS--------AHRTPKMMVQ----------FASEA-RERGINI 61 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHHH----------HHHHT-TTTTCCE
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEC--------CcCCHHHHHH----------HHHHH-HhCCCcE
Confidence 345777788876 3466777888888888775554443 2346665521 11000 0012344
Q ss_pred cccccccCc----hhHHHHHhhCCceeccccccchh---hhHHHHhhhh--cc--eee-eCC--ccCHHHHHHHHHHHhc
Q 040486 353 GGFWTHCGW----NSTLESICEGVPMICQPCFGDQM---VNARYVSDVW--KV--GLH-LER--KLERGEVERTIRRVMT 418 (460)
Q Consensus 353 ~~~I~HgG~----gs~~eal~~GvP~v~~P~~~DQ~---~na~~v~~~~--G~--g~~-~~~--~~~~~~l~~~i~~ll~ 418 (460)
+|.=+|. .++..++ .-+|+|.+|....-. +--.-+.+ + |+ +.. +++ ..+...++..|..+ .
T Consensus 62 --iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~ 136 (163)
T 3ors_A 62 --IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQ-MPGGIPVATTAIGAAGAKNAGILAARMLSI-Q 136 (163)
T ss_dssp --EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHHT-T
T ss_pred --EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhh-CCCCCceEEEEcCCcccHHHHHHHHHHHhC-C
Confidence 7776663 3444443 568999999854311 11112222 2 43 222 231 35556666666443 6
Q ss_pred cchHHHHHHHHHHHHHHHHHH
Q 040486 419 EAEGQEIRVRIMILKEKLNLC 439 (460)
Q Consensus 419 ~~~~~~~~~~a~~~~~~~~~~ 439 (460)
| +.++++.+.+++++++.
T Consensus 137 d---~~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 137 N---PSLVEKLNQYESSLIQK 154 (163)
T ss_dssp C---THHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHHH
Confidence 6 78999999888888753
No 111
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=53.98 E-value=20 Score=31.46 Aligned_cols=40 Identities=10% Similarity=0.084 Sum_probs=36.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..+.+|++.+.++-.|-....-++..|..+|++|.+++..
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCC
Confidence 4568999999999999999999999999999999998774
No 112
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=53.06 E-value=15 Score=30.52 Aligned_cols=44 Identities=2% Similarity=0.046 Sum_probs=26.9
Q ss_pred ccccCCCCCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeC
Q 040486 6 DSHIHQKKGRRLILFPLPLQGH----INPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 6 ~~~~~~~~~~~vl~~~~~~~GH----~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+..++....|+|.+++... +. ..-...|++.|+++|+.|.+-..
T Consensus 5 ~~~~~~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG 52 (189)
T 3sbx_A 5 TAKSDEPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGG 52 (189)
T ss_dssp --------CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred cCcCCCCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 3455556679999998654 43 34567888888999998776644
No 113
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=53.00 E-value=1e+02 Score=26.25 Aligned_cols=151 Identities=13% Similarity=0.040 Sum_probs=78.5
Q ss_pred ccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcC-CCCccccccC
Q 040486 264 ISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLD-GRGHMVKWAP 342 (460)
Q Consensus 264 ~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~v~~~vp 342 (460)
.-|++- .+++++.|+.|.++ ...+..|.+.|..+.+.... +.+.+.+... +++.+...--
T Consensus 24 Pifl~L-~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----------~~~~l~~l~~~~~i~~i~~~~ 84 (223)
T 3dfz_A 24 TVMLDL-KGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----------VSAEINEWEAKGQLRVKRKKV 84 (223)
T ss_dssp EEEECC-TTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----------CCHHHHHHHHTTSCEEECSCC
T ss_pred ccEEEc-CCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----------CCHHHHHHHHcCCcEEEECCC
Confidence 445665 46778888877544 44567777778887665432 2222322111 2222222222
Q ss_pred hhhhhccCCCcccccccCchhHHHHHhhCCceeccccc-cchhhhH-----HHHhhhhcceeeeCC----ccCHHHHHHH
Q 040486 343 QQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCF-GDQMVNA-----RYVSDVWKVGLHLER----KLERGEVERT 412 (460)
Q Consensus 343 ~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~-~DQ~~na-----~~v~~~~G~g~~~~~----~~~~~~l~~~ 412 (460)
+.+-|..+++ +|.--|.-.+.+.++.-.- ..+|+. .|.+..+ ..+.+. ++-+.+.. ..-+..|++.
T Consensus 85 ~~~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ 160 (223)
T 3dfz_A 85 GEEDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKED 160 (223)
T ss_dssp CGGGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHH
T ss_pred CHhHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHH
Confidence 3455677888 8888887666665554322 333332 3544433 334443 45444543 2334556666
Q ss_pred HHHHhccchHHHHHHHHHHHHHHHHH
Q 040486 413 IRRVMTEAEGQEIRVRIMILKEKLNL 438 (460)
Q Consensus 413 i~~ll~~~~~~~~~~~a~~~~~~~~~ 438 (460)
|.+++-. +...+-+.+.++++++++
T Consensus 161 ie~~lp~-~~~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 161 LSSNYDE-SYTQYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHSCT-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHccH-HHHHHHHHHHHHHHHHHH
Confidence 6666643 224566677777777764
No 114
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=52.91 E-value=8.3 Score=35.43 Aligned_cols=34 Identities=18% Similarity=0.129 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.|||+++-.|+.| ..+|..|+++||+|+++...
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEECh
Confidence 46899999877776 45788999999999999763
No 115
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=52.52 E-value=87 Score=24.92 Aligned_cols=130 Identities=15% Similarity=0.139 Sum_probs=73.1
Q ss_pred EEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhc--cCCCc
Q 040486 276 IYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLA--HPATG 353 (460)
Q Consensus 276 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~--~~~~~ 353 (460)
|-|-+||.+ .-...++....++.++.+.-..+.+ ...+|+.+. ++.. ..++
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~s--------aHR~p~~~~----------------~~~~~a~~~V- 54 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVAS--------AHRTPELVE----------------EIVKNSKADV- 54 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHH----------------HHHHHCCCSE-
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEc--------ccCCHHHHH----------------HHHHhcCCCE-
Confidence 445677766 3466777888888888775444433 234666552 1121 1144
Q ss_pred ccccccCch----hHHHHHhhCCceeccccccchhhhHH--HHhh--hhcceeee---CCccCHHHHHHHHHHHhccchH
Q 040486 354 GFWTHCGWN----STLESICEGVPMICQPCFGDQMVNAR--YVSD--VWKVGLHL---ERKLERGEVERTIRRVMTEAEG 422 (460)
Q Consensus 354 ~~I~HgG~g----s~~eal~~GvP~v~~P~~~DQ~~na~--~v~~--~~G~g~~~---~~~~~~~~l~~~i~~ll~~~~~ 422 (460)
+|.=+|.- ++..++ .-+|+|.+|....-..... -+.+ . |+.+.. +...+...++..|. -+.|
T Consensus 55 -iIa~AG~aa~Lpgvva~~-t~~PVIgVP~~~~l~G~daLlS~vqmP~-gvpVatV~I~~~~nAa~lA~~Il-~~~d--- 127 (157)
T 2ywx_A 55 -FIAIAGLAAHLPGVVASL-TTKPVIAVPVDAKLDGLDALLSSVQMPP-GIPVATVGIDRGENAAILALEIL-ALKD--- 127 (157)
T ss_dssp -EEEEEESSCCHHHHHHTT-CSSCEEEEEECSSGGGHHHHHHHHSCCT-TSCCEECCTTCHHHHHHHHHHHH-TTTC---
T ss_pred -EEEEcCchhhhHHHHHhc-cCCCEEEecCCCccCcHHHHHHHhcCCC-CCeeEEEecCCcHHHHHHHHHHH-hcCC---
Confidence 77766542 333333 3579999999321111111 1333 2 533221 12456666666664 3467
Q ss_pred HHHHHHHHHHHHHHHHH
Q 040486 423 QEIRVRIMILKEKLNLC 439 (460)
Q Consensus 423 ~~~~~~a~~~~~~~~~~ 439 (460)
+.++++.+.++++.++.
T Consensus 128 ~~l~~kl~~~r~~~~~~ 144 (157)
T 2ywx_A 128 ENIAKKLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88999999988888753
No 116
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=51.59 E-value=11 Score=32.48 Aligned_cols=38 Identities=16% Similarity=0.002 Sum_probs=33.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
|||+|..-|+-|=..-...||..|+++|++|.++-.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 78999777778888899999999999999999997654
No 117
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=51.58 E-value=1.4e+02 Score=29.19 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..||+++. +-.-.+.+++.|.+-|.+|..+.+.
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~elGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLELGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHcCCEEEEEEeC
Confidence 47888873 3345577888888999999988765
No 118
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=51.38 E-value=12 Score=33.78 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=28.1
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 11 QKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
...+|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 18 ~~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 4557999999776655 5689999999999998754
No 119
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=50.93 E-value=18 Score=26.88 Aligned_cols=40 Identities=10% Similarity=0.079 Sum_probs=28.8
Q ss_pred cEEEEE-cCC--CccCHHHHHHHHHHHHhC-CC-eEEEEeCCCCC
Q 040486 15 RRLILF-PLP--LQGHINPMLQLANILYSK-GF-SITIIHTNFNS 54 (460)
Q Consensus 15 ~~vl~~-~~~--~~GH~~p~l~La~~L~~~-Gh-~Vt~~~~~~~~ 54 (460)
+|++++ +.+ +.......+.+|..+.+. || +|+++......
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV 46 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAV 46 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGG
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHH
Confidence 466655 444 335567789999999999 99 99988776433
No 120
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=50.16 E-value=18 Score=32.86 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=28.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.++|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 346899999888777 5688999999999998754
No 121
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=49.85 E-value=38 Score=24.95 Aligned_cols=40 Identities=8% Similarity=-0.031 Sum_probs=31.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++++||++++..+.|--.-.-.+=+.+.++|.++.+-...
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~ 40 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP 40 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 3467899999887766666668888888999998876554
No 122
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=49.55 E-value=13 Score=28.53 Aligned_cols=32 Identities=31% Similarity=0.530 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|||+++-. |.+- ..+++.|.++||+|+++..
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEEC
Confidence 489988843 5553 3578999999999999865
No 123
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=49.42 E-value=99 Score=30.19 Aligned_cols=33 Identities=21% Similarity=0.389 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..||+++. +-.-.+.|++.|.+-|.+|..+.+.
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~ 392 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSH 392 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeC
Confidence 46888874 3445678888899999999987774
No 124
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=49.09 E-value=53 Score=25.32 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=39.8
Q ss_pred hCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 040486 370 EGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLN 437 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~ 437 (460)
..+|+|++--..+. .......+ .|+--.+.+.++.+.|..+|+.++.. ..++...+++++.+.
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~~-~g~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAIQ-DGAYDFIAKPFAADRLVQSARRAEEK---RRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHHH-TTCCEEEESSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHh-cCCCeEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 46788876544443 33444444 37655565568999999999999876 455444444444444
No 125
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=48.44 E-value=13 Score=34.36 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|++|||+++-.|..|. .+|..|.++||+|+++..
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 3458999997766663 468889999999998854
No 126
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=48.42 E-value=12 Score=33.59 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+|||+++-.|..|. .+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 58999997766663 578899999999999865
No 127
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=48.25 E-value=33 Score=30.55 Aligned_cols=39 Identities=13% Similarity=0.243 Sum_probs=31.0
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILFP--LPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~~--~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+.|+++++ -|+-|-..-...||..|++.|..|.++-.+.
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccC
Confidence 45565553 4577888889999999999999999997654
No 128
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=48.04 E-value=31 Score=29.54 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=36.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
..+++|++..-|+.|-..-++.+|..|+++|+.|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34688999999999999999999999999999999887753
No 129
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=47.84 E-value=12 Score=32.94 Aligned_cols=53 Identities=15% Similarity=0.158 Sum_probs=37.4
Q ss_pred cCCCcccccccCchhHHHHHhh---CCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhcc
Q 040486 349 HPATGGFWTHCGWNSTLESICE---GVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 349 ~~~~~~~I~HgG~gs~~eal~~---GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
.+|+ +|+=||=||+.+++.. ++|++.++. + . +|.-. ++.++++.+++.++++.
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G----------~-~Gfl~----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-G----------R-LGFLT----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-S----------S-CCSSC----CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-C----------C-CCccC----cCCHHHHHHHHHHHHcC
Confidence 4577 9999999999999876 788888763 2 1 12211 34567777777777764
No 130
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=47.74 E-value=15 Score=33.30 Aligned_cols=24 Identities=8% Similarity=0.144 Sum_probs=20.6
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCCC
Q 040486 30 PMLQLANILYSKGFSITIIHTNFN 53 (460)
Q Consensus 30 p~l~La~~L~~~Gh~Vt~~~~~~~ 53 (460)
...++|+++.++|++|+|++.+..
T Consensus 67 mG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 67 RGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTS
T ss_pred HHHHHHHHHHHCCCEEEEEecCCC
Confidence 567889999999999999988643
No 131
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=47.69 E-value=1.4e+02 Score=25.96 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=24.2
Q ss_pred CCeeEEE-ecCCc-hhHHHHHHHcCCceEEEecc
Q 040486 114 EPIACLI-TDATW-YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 114 ~kpD~VI-~D~~~-~~~~~~A~~lgiP~v~~~~~ 145 (460)
..||+|| .|+.. .-+..=|..+|||+|.+..+
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 3699876 55543 56777899999999998665
No 132
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=46.94 E-value=1.9e+02 Score=27.27 Aligned_cols=138 Identities=12% Similarity=0.064 Sum_probs=76.7
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccC-
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHP- 350 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~- 350 (460)
..+.|-|-+||.+ .-....+....++.+|...-..+.+ .+.+|+... .++.+.+- +..
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~s--------aHR~p~~~~----------~~~~~~~~-~g~~ 322 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTS--------AHKGPDETL----------RIKAEYEG-DGIP 322 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTCHHHHH----------HHHHHHHT-TCCC
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeee--------ccCCHHHHH----------HHHHHHHH-CCCC
Confidence 3456778888877 3566777888888888775444443 234666542 11111110 112
Q ss_pred CCcccccccCc----hhHHHHHhhCCceeccccccchhhhHHH--Hhh--hhcceeeeCC-ccCHHHHHHHHHHHhccch
Q 040486 351 ATGGFWTHCGW----NSTLESICEGVPMICQPCFGDQMVNARY--VSD--VWKVGLHLER-KLERGEVERTIRRVMTEAE 421 (460)
Q Consensus 351 ~~~~~I~HgG~----gs~~eal~~GvP~v~~P~~~DQ~~na~~--v~~--~~G~g~~~~~-~~~~~~l~~~i~~ll~~~~ 421 (460)
++ +|.=+|. .++..++ .-+|+|.+|....-...... +.+ . |+.+..-. ..++..++..|. -++|
T Consensus 323 ~v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~vqmp~-g~pvatv~~~~nAa~~A~~Il-~~~~-- 395 (425)
T 2h31_A 323 TV--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSLRLPS-GLGCSTVLSPEGSAQFAAQIF-GLSN-- 395 (425)
T ss_dssp EE--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTSSCCS-SCCCEECCCHHHHHHHHHHHH-HTTC--
T ss_pred eE--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHhcCCC-CCceEEecCchHHHHHHHHHH-ccCC--
Confidence 34 6766653 3444444 47899999985221111122 222 2 44432222 455666666664 4577
Q ss_pred HHHHHHHHHHHHHHHHH
Q 040486 422 GQEIRVRIMILKEKLNL 438 (460)
Q Consensus 422 ~~~~~~~a~~~~~~~~~ 438 (460)
+.++++.+..+...+.
T Consensus 396 -~~l~~kl~~~~~~~~~ 411 (425)
T 2h31_A 396 -HLVWSKLRASILNTWI 411 (425)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 7888888887777764
No 133
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=46.78 E-value=25 Score=29.85 Aligned_cols=40 Identities=18% Similarity=0.121 Sum_probs=35.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.++.||++.+.++-.|-....-++..|..+|++|.+.+..
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 4568999999999999999999999999999999998775
No 134
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=46.63 E-value=13 Score=34.74 Aligned_cols=30 Identities=23% Similarity=0.261 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
|||+++-.|--| +.+|..|+++|++|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 899999665334 888999999999999984
No 135
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=46.36 E-value=6.6 Score=37.84 Aligned_cols=106 Identities=17% Similarity=0.150 Sum_probs=55.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecC--CCCCCccc---ccccHHHHHH
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIE--DSLSETEA---STADLVALLS 87 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~---~~~~~~~~~~ 87 (460)
.+||-+|++. .|=.-++.+|+.|.+.|.++. +|.-....... .|+....+. .++|+... .+..+ ....
T Consensus 8 ~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e-~GI~v~~V~~vTgfPEil~GRVKTLHP-~ihg 80 (523)
T 3zzm_A 8 RPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIAD-TGIPVTPVEQLTGFPEVLDGRVKTLHP-RVHA 80 (523)
T ss_dssp CCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHT-TTCCCEEHHHHHSCCCCTTTTSSSCSH-HHHH
T ss_pred ccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHH-cCCceeeccccCCCchhhCCccccCCc-hhhh
Confidence 4466666665 344558899999999999875 44322232233 578777775 35665442 12222 1222
Q ss_pred HHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHH
Q 040486 88 LLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVA 132 (460)
Q Consensus 88 ~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A 132 (460)
-.... +...+.++++.+..= ...|+||++- +++-..++
T Consensus 81 GiLa~--r~~~~h~~~l~~~~i----~~iDlVvvNL-YPF~~tv~ 118 (523)
T 3zzm_A 81 GLLAD--LRKSEHAAALEQLGI----EAFELVVVNL-YPFSQTVE 118 (523)
T ss_dssp HHHCC--TTSHHHHHHHHHHTC----CCCSEEEEEC-CCHHHHHH
T ss_pred hhccC--CCCHHHHHHHHHCCC----CceeEEEEeC-CChHHHHh
Confidence 22111 112222333322111 5799999994 55554444
No 136
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=46.31 E-value=14 Score=31.93 Aligned_cols=34 Identities=24% Similarity=0.251 Sum_probs=28.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..+|||.|+-.|..|- .||+.|.++||+|+.+..
T Consensus 4 ~~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 3569999999998885 589999999999998755
No 137
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=45.96 E-value=1.2e+02 Score=25.63 Aligned_cols=39 Identities=8% Similarity=0.116 Sum_probs=32.2
Q ss_pred CcEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILFPLP-LQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~~~~-~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+..+.+++.+ +.|=..-++.++..+..+|..|.++.+..
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 3456666665 88999999999999999999999997654
No 138
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=45.68 E-value=72 Score=30.86 Aligned_cols=33 Identities=18% Similarity=0.370 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..||+++..+. +. +.+++.|.+-|-+|+.+++.
T Consensus 332 GKrv~i~~~~~--~~---~~l~~~L~ElGmevv~~gt~ 364 (483)
T 3pdi_A 332 GKRVLLYTGGV--KS---WSVVSALQDLGMKVVATGTK 364 (483)
T ss_dssp TCEEEEECSSS--CH---HHHHHHHHHHTCEEEEECBS
T ss_pred CCEEEEECCCc--hH---HHHHHHHHHCCCEEEEEecC
Confidence 57888876553 33 46677788889999988764
No 139
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=45.41 E-value=18 Score=32.60 Aligned_cols=31 Identities=16% Similarity=0.358 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
+.||.|+-.|..|. ++|+.|.++||+|++.-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 56899999998884 78999999999999873
No 140
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=45.27 E-value=14 Score=33.20 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=26.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+++||+|+-.|..|+ .+|..|+++||+|+++..
T Consensus 14 ~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~ 46 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQ 46 (302)
T ss_dssp CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEEC
Confidence 457899998877776 578889999999998854
No 141
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=45.24 E-value=28 Score=28.73 Aligned_cols=39 Identities=13% Similarity=0.203 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQ-LANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~-La~~L~~~Gh~Vt~~~~ 50 (460)
|++|||+++-....|+..-+.. +++.|.+.|++|.++.-
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 42 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTV 42 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 4567998776555677665544 56677778999988854
No 142
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=45.15 E-value=22 Score=32.40 Aligned_cols=34 Identities=18% Similarity=0.130 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.++||.|+-.|..| +-.+|+.|.++||+|+..-.
T Consensus 3 ~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 3 AMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 46899999998887 45699999999999998754
No 143
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=44.96 E-value=19 Score=33.55 Aligned_cols=38 Identities=13% Similarity=0.154 Sum_probs=29.5
Q ss_pred CCcEEEEEcCCCcc-C---HHHHHHHHHHH-HhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQG-H---INPMLQLANIL-YSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~G-H---~~p~l~La~~L-~~~Gh~Vt~~~~ 50 (460)
++|||+++..|..+ | +.....++++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 47899999866444 3 34578899999 999999999864
No 144
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=44.94 E-value=1.2e+02 Score=28.20 Aligned_cols=89 Identities=6% Similarity=-0.039 Sum_probs=56.0
Q ss_pred cEEEEEcCCCcc-CHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcccccccHHHHHHHHHHhc
Q 040486 15 RRLILFPLPLQG-HINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETEASTADLVALLSLLNVQC 93 (460)
Q Consensus 15 ~~vl~~~~~~~G-H~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (460)
.+++++++|+.+ .-..+..++++|.+.|.+|.+.+...........+++.+..+- +
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~---~-------------------- 277 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEV---N-------------------- 277 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSC---C--------------------
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCC---C--------------------
Confidence 467788888887 4555777888998899999888764332222212344444220 0
Q ss_pred chhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEE
Q 040486 94 VVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVL 142 (460)
Q Consensus 94 ~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~ 142 (460)
...+.. +.|++|+.... .+..-|-.+|+|.+.+
T Consensus 278 -------~~~ll~--------~~d~~v~~gG~-~t~~Eal~~GvP~v~~ 310 (404)
T 3h4t_A 278 -------HQVLFG--------RVAAVVHHGGA-GTTTAVTRAGAPQVVV 310 (404)
T ss_dssp -------HHHHGG--------GSSEEEECCCH-HHHHHHHHHTCCEEEC
T ss_pred -------HHHHHh--------hCcEEEECCcH-HHHHHHHHcCCCEEEc
Confidence 011221 37999999754 3445677789999996
No 145
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=44.85 E-value=18 Score=32.41 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
++|||.|+-.|..|. .+|+.|.++||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 468999998877774 678999999999998854
No 146
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=44.84 E-value=1.2e+02 Score=24.45 Aligned_cols=140 Identities=13% Similarity=0.092 Sum_probs=78.7
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCC
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPA 351 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~ 351 (460)
+.|.|-|-+||.+. -...++....++.++..+-..+.+ .+..|+.+. .|+-..+ -+..+
T Consensus 11 ~~P~V~IimGS~SD--~~v~~~a~~~l~~~gi~~ev~V~s--------aHR~p~~l~----------~~~~~a~-~~g~~ 69 (173)
T 4grd_A 11 SAPLVGVLMGSSSD--WDVMKHAVAILQEFGVPYEAKVVS--------AHRMPDEMF----------DYAEKAR-ERGLR 69 (173)
T ss_dssp SSCSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHH----------HHHHHHT-TTTCS
T ss_pred CCCeEEEEeCcHhH--HHHHHHHHHHHHHcCCCEEEEEEc--------cccCHHHHH----------HHHHHHH-hcCCe
Confidence 45678888999774 466777888888988775554443 234665542 1111111 11233
Q ss_pred CcccccccCc----hhHHHHHhhCCceeccccccc---hhhhHHHHhhhh--cceeeeCC-----ccCHHHHHHHHHHHh
Q 040486 352 TGGFWTHCGW----NSTLESICEGVPMICQPCFGD---QMVNARYVSDVW--KVGLHLER-----KLERGEVERTIRRVM 417 (460)
Q Consensus 352 ~~~~I~HgG~----gs~~eal~~GvP~v~~P~~~D---Q~~na~~v~~~~--G~g~~~~~-----~~~~~~l~~~i~~ll 417 (460)
+ +|.=.|. .++..+ ..-+|+|.+|.... -.+--.-+.+ + |+.+..-. ..+..-++..|- -+
T Consensus 70 V--iIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivq-MP~Gvpvatv~i~~~~a~NAallA~~IL-a~ 144 (173)
T 4grd_A 70 A--IIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQ-MPKGVPVATFAIGEAGAANAALFAVSIL-SG 144 (173)
T ss_dssp E--EEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHC-CCTTSCCEECCSSHHHHHHHHHHHHHHH-TT
T ss_pred E--EEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHh-CCCCCCceEEecCCcchHHHHHHHHHHH-cC
Confidence 4 7665552 244433 45789999998543 2222222222 2 44332211 234444554442 24
Q ss_pred ccchHHHHHHHHHHHHHHHHHHH
Q 040486 418 TEAEGQEIRVRIMILKEKLNLCL 440 (460)
Q Consensus 418 ~~~~~~~~~~~a~~~~~~~~~~~ 440 (460)
+| +.++++.++++++.++..
T Consensus 145 ~d---~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 145 NS---VDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp SC---HHHHHHHHHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHHHHHHHHH
Confidence 67 899999999998887643
No 147
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=44.79 E-value=39 Score=30.45 Aligned_cols=38 Identities=5% Similarity=-0.075 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQG-H---INPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~G-H---~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++||+++..|..+ | +.....++++|.+.||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5889998865433 2 356789999999999999999753
No 148
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=44.76 E-value=1.2e+02 Score=29.83 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFN 53 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~ 53 (460)
..|++++..+. + .+.+++.|.+-|-+|..+++...
T Consensus 335 GKrv~i~~~~~--~---~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 335 GKTACLYVGGS--R---SHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp TCEEEEEESSS--H---HHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCEEEEECCch--H---HHHHHHHHHHCCCEEEEEEeccC
Confidence 46888876543 3 45567777788999999987543
No 149
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=44.64 E-value=36 Score=31.06 Aligned_cols=35 Identities=9% Similarity=-0.000 Sum_probs=24.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.+|||+|+. .-+-...+.++|.++||+|..+.+.
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt~ 54 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFTV 54 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 4569999993 2233445678999999999877653
No 150
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=44.48 E-value=20 Score=32.56 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|||+++..+ ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECC
Confidence 4899999876 5678999999999999998775
No 151
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=44.39 E-value=25 Score=27.78 Aligned_cols=34 Identities=26% Similarity=0.470 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..++|+++-.|..| ..+++.|.++|++|+++...
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 35899988544333 55789999999999999764
No 152
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=43.43 E-value=19 Score=32.48 Aligned_cols=46 Identities=11% Similarity=0.070 Sum_probs=31.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEe
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCS 67 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~ 67 (460)
|||+++-.|+.|- .+|..|+++||+|+++.... .+...+ .|+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~-~g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAG-NGLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHH-TCEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHh-CCCEEEc
Confidence 7999998888884 46888999999999998753 221222 3665543
No 153
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=43.36 E-value=45 Score=28.78 Aligned_cols=38 Identities=13% Similarity=0.262 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCc---c--------CHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQ---G--------HINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~---G--------H~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++||+++..... + ...=+....+.|.++|++|+++++.
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~ 51 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSET 51 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCC
Confidence 468988875422 1 3356777788899999999999985
No 154
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=43.23 E-value=20 Score=32.04 Aligned_cols=37 Identities=8% Similarity=0.160 Sum_probs=28.1
Q ss_pred cEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGH---INPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH---~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6999998774221 234567999999999999998764
No 155
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=42.73 E-value=32 Score=28.27 Aligned_cols=33 Identities=15% Similarity=0.388 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|+|+++ |+.|.+ -..++++|.++||+|+.++-.
T Consensus 4 ~~ilVt--GatG~i--G~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQT--GLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcHH--HHHHHHHHHHCCCeEEEEEeC
Confidence 677665 344433 467899999999999998764
No 156
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=42.57 E-value=22 Score=31.49 Aligned_cols=32 Identities=9% Similarity=0.054 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+|+-.|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 688888776666 36789999999999998653
No 157
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=42.04 E-value=20 Score=32.56 Aligned_cols=32 Identities=9% Similarity=0.268 Sum_probs=27.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+++-.|+.|- .+|..|+++||+|+++...
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCC
Confidence 8999998887774 5788899999999999875
No 158
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=41.89 E-value=11 Score=31.92 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+++-.| .+ ...+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G---~~--G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGE---TT--AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCH---HH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCC---HH--HHHHHHHHHhCCCeEEEEECC
Confidence 678877643 32 457899999999999999764
No 159
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=41.51 E-value=2e+02 Score=25.94 Aligned_cols=148 Identities=12% Similarity=0.031 Sum_probs=73.1
Q ss_pred CCeEEEEEccccccCC-HHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccC
Q 040486 272 PKSVIYVSFGSIAAIN-ETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHP 350 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~ 350 (460)
.+++++++ |...... .++...+++-+++.+.+-|+.+++-.... ...-|. .+.......++....
T Consensus 101 g~~~lll~-gpeP~~~w~~f~~~vl~~a~~~gV~~vv~Lggl~~~~---phtrp~----------~V~~~at~~~l~~~~ 166 (319)
T 2p90_A 101 NKPFLMLS-GPEPDLRWGDFSNAVVDLVEKFGVENTICLYAAPMTV---PHTRPT----------VVTAHGNSTDRLKDQ 166 (319)
T ss_dssp CCEEEEEE-EECCSBCHHHHHHHHHHHHHHTTCCEEEEEEEEEESC---CTTSCC----------CEEEEESSGGGCSSC
T ss_pred CCeEEEEE-CCCChHHHHHHHHHHHHHHHHcCCCEEEEEeCccCCC---CCCCCC----------CeEEEeCCHHHHhhh
Confidence 34566665 6555544 57777788999999999888777643110 000010 111111122222111
Q ss_pred CC--cccccccCchhHH--HHHhhCCceecc----cccc---chhhhHHHHhhhhc--ceeeeCC---ccCHHHHHHHHH
Q 040486 351 AT--GGFWTHCGWNSTL--ESICEGVPMICQ----PCFG---DQMVNARYVSDVWK--VGLHLER---KLERGEVERTIR 414 (460)
Q Consensus 351 ~~--~~~I~HgG~gs~~--eal~~GvP~v~~----P~~~---DQ~~na~~v~~~~G--~g~~~~~---~~~~~~l~~~i~ 414 (460)
.. +-..--||...+. ++...|.|.+++ |+.. +.+.=|..+-+.+. +|+.++. .-.++.+.+.|.
T Consensus 167 ~~~~~~~~ipggi~glL~~~~~~~Gi~a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~~~L~e~A~~~e~~i~ 246 (319)
T 2p90_A 167 VSLDTRMTVPGSASLMLEKLLKDKGKNVSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPLLALERDAEKVHRQLM 246 (319)
T ss_dssp CCCCCCEEECCCHHHHHHHHHHHTTCCEEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHH
T ss_pred hccccCcEEeccHHHHHHHHHHHCCCCEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 11 0011235665544 456789998775 3222 33433433321121 3555554 445677888888
Q ss_pred HHhccchHHHHHHHHHHHHHH
Q 040486 415 RVMTEAEGQEIRVRIMILKEK 435 (460)
Q Consensus 415 ~ll~~~~~~~~~~~a~~~~~~ 435 (460)
++.+.. +.+.+-++.+-++
T Consensus 247 ~l~~~~--~e~~~~V~~LE~~ 265 (319)
T 2p90_A 247 EQTEES--SEIQRVVGALEQQ 265 (319)
T ss_dssp HHHHHC--HHHHHHHHHHHHH
T ss_pred HHHHhh--HHHHHHHHHHHhh
Confidence 887521 4444444444333
No 160
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=40.91 E-value=30 Score=30.66 Aligned_cols=40 Identities=18% Similarity=0.252 Sum_probs=31.1
Q ss_pred CCcEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 13 KGRRLILFP--LPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 13 ~~~~vl~~~--~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+++|++.+. -|+-|-..-...||..|+++|++|.++-.+.
T Consensus 2 ~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 2 AETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp --CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 356666554 4577888999999999999999999986654
No 161
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=40.85 E-value=41 Score=29.50 Aligned_cols=43 Identities=14% Similarity=0.126 Sum_probs=27.4
Q ss_pred cccccCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 5 GDSHIHQKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 5 ~~~~~~~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+..+...-..|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 18 gp~~m~~~l~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 18 GPGSMDKTLDKQVAIVTGASRG---IGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp -----CCTTTTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcccccCCCCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3333333334678888866542 346889999999999988765
No 162
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=40.58 E-value=22 Score=29.76 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 676655 3445443 57899999999999998763
No 163
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=40.29 E-value=20 Score=32.54 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITII 48 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~ 48 (460)
.+|||+++-.|+.| ..+|..|+++||+|+++
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILI 48 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEE
Confidence 47999999888777 45788899999999999
No 164
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=40.19 E-value=22 Score=29.85 Aligned_cols=33 Identities=6% Similarity=0.191 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+++ |+.|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 676555 3445443 57899999999999998753
No 165
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=40.09 E-value=1.1e+02 Score=29.19 Aligned_cols=26 Identities=15% Similarity=0.245 Sum_probs=21.6
Q ss_pred CCeeEEEecCCchhHHHHHHHcCCceEEE
Q 040486 114 EPIACLITDATWYFTQAVAESLKLSRIVL 142 (460)
Q Consensus 114 ~kpD~VI~D~~~~~~~~~A~~lgiP~v~~ 142 (460)
.+||++|.+.. ...+|+++|||++.+
T Consensus 384 ~~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 47999998853 567899999999985
No 166
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=40.05 E-value=16 Score=33.14 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGF-SITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh-~Vt~~~~ 50 (460)
..+|||.|+-.|..| ..+|+.|+++|| +|+++..
T Consensus 22 ~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 456899999877666 478999999999 9998755
No 167
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=40.05 E-value=13 Score=31.73 Aligned_cols=35 Identities=11% Similarity=0.055 Sum_probs=27.2
Q ss_pred CCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 11 QKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+++|||+|+-.|..| ..+|+.|.++||+|+++..
T Consensus 20 ~m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 20 FQSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hhcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 3567899999766655 4678899999999998543
No 168
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=39.99 E-value=23 Score=27.41 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.||+++-+|..| ..+|+.|.++||+|+++...
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 4789888765544 47899999999999999875
No 169
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=39.88 E-value=38 Score=30.71 Aligned_cols=36 Identities=11% Similarity=0.178 Sum_probs=27.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
.++|||+|+-.+.++ ++..++|.++||+|..+.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 357999999877654 345678888999999887753
No 170
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=39.73 E-value=24 Score=29.68 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..|||.++-.|..| ..+|+.|.++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 46899999766655 5678899999999998854
No 171
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=39.70 E-value=34 Score=27.54 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQ---GHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~---GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..+|+++|.-+. --..+...|++.|.++|.+|.|..+|
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 70 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHP 70 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 578888874322 13468899999999999999999996
No 172
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=39.65 E-value=45 Score=30.23 Aligned_cols=36 Identities=17% Similarity=0.114 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+++|||+|+-.+.+ .+...++|.++||+|..+.+..
T Consensus 5 ~~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEECCC
T ss_pred ccCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEcCC
Confidence 56899999977643 3455678888999999877753
No 173
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=39.54 E-value=50 Score=27.60 Aligned_cols=45 Identities=9% Similarity=0.147 Sum_probs=27.1
Q ss_pred cccccCCCCCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeC
Q 040486 5 GDSHIHQKKGRRLILFPLPLQGH----INPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 5 ~~~~~~~~~~~~vl~~~~~~~GH----~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+........++|.+++... +. ..-...|++.|+++|+.|..-..
T Consensus 13 g~~~~~~~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG 61 (199)
T 3qua_A 13 GDVKEGQDRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGG 61 (199)
T ss_dssp --------CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCB
T ss_pred cccccccCCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 44455556668999987554 32 45567888999999998866543
No 174
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=39.39 E-value=32 Score=29.27 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
||+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 677888866543 346889999999999988765
No 175
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=39.21 E-value=35 Score=29.00 Aligned_cols=36 Identities=22% Similarity=0.301 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+.|+|+++ |+.|.+ -..++++|.++||+|+.++-.
T Consensus 19 l~~~~ilVt--GatG~i--G~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 19 FQGMRVLVV--GANGKV--ARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCCeEEEE--CCCChH--HHHHHHHHHhCCCeEEEEECC
Confidence 346777666 344443 357889999999999998753
No 176
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=39.16 E-value=15 Score=35.59 Aligned_cols=37 Identities=19% Similarity=0.385 Sum_probs=27.4
Q ss_pred cCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 9 IHQKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 9 ~~~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
++.+++++|.|+-.|..| ..+|+.|+++||+|++...
T Consensus 10 ~~~~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNR 46 (480)
T ss_dssp -----CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred ccccCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 456899999999888777 4689999999999998754
No 177
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=39.15 E-value=41 Score=26.32 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=30.1
Q ss_pred EEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 16 RLI-LFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~vl-~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|++ ++..+..-.+.+.+.+|...++.|++|+++.+-
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 554 446677888999999999999999999999885
No 178
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=38.88 E-value=31 Score=29.50 Aligned_cols=36 Identities=8% Similarity=-0.032 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+.|+++++.++.| =-..+++.|+++|++|+++.-.
T Consensus 5 ~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 5 GEARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp -CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeCC
Confidence 34566777755443 3467899999999999988653
No 179
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=38.77 E-value=22 Score=31.03 Aligned_cols=39 Identities=23% Similarity=0.173 Sum_probs=31.9
Q ss_pred CCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLP---LQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~---~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+||..|++.| +.|--.-...|+..|..+|+.||.+=-+
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiD 62 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKID 62 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEE
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecC
Confidence 36899999877 4466777899999999999999986443
No 180
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=38.59 E-value=34 Score=25.76 Aligned_cols=37 Identities=19% Similarity=0.123 Sum_probs=26.8
Q ss_pred cEEEEEcCCC-ccCH-HHHHHHHHHHHhCC--CeEEEEeCC
Q 040486 15 RRLILFPLPL-QGHI-NPMLQLANILYSKG--FSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~-~GH~-~p~l~La~~L~~~G--h~Vt~~~~~ 51 (460)
||++|+-+.. .-.. +-.+.+|....++| |+|.++.-.
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 8887775443 2332 44778899999999 899998775
No 181
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=38.06 E-value=32 Score=29.44 Aligned_cols=23 Identities=13% Similarity=0.200 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhCCCeEEEEeCCC
Q 040486 30 PMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 30 p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
--.++|++|+++|++|+++..+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 45688999999999999987643
No 182
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.04 E-value=19 Score=32.36 Aligned_cols=33 Identities=15% Similarity=-0.019 Sum_probs=26.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+|||.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 458999997776664 688999999999998854
No 183
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=37.81 E-value=56 Score=25.38 Aligned_cols=35 Identities=11% Similarity=0.061 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..+++++..|+ =+.|++++++.|.++|.+|+++ ..
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~ 52 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HV 52 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-Ee
Confidence 56888888654 4899999999999999999998 54
No 184
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=37.81 E-value=37 Score=23.18 Aligned_cols=49 Identities=12% Similarity=0.119 Sum_probs=31.2
Q ss_pred hhCCceeccccccchhhhH-HH--HhhhhcceeeeCCccCHHHHHHHHHHHhc
Q 040486 369 CEGVPMICQPCFGDQMVNA-RY--VSDVWKVGLHLERKLERGEVERTIRRVMT 418 (460)
Q Consensus 369 ~~GvP~v~~P~~~DQ~~na-~~--v~~~~G~g~~~~~~~~~~~l~~~i~~ll~ 418 (460)
-.|+|++++--...|-+.- -. .... |+.-.+-+...+++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakke-gvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhc-CcchhhhccCCHHHHHHHHHHHHH
Confidence 4688888876666554432 22 2332 444444347889999999998875
No 185
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=37.76 E-value=1.6e+02 Score=23.67 Aligned_cols=141 Identities=11% Similarity=0.095 Sum_probs=77.7
Q ss_pred eEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCc
Q 040486 274 SVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATG 353 (460)
Q Consensus 274 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~ 353 (460)
|.|-|-+||.+ .....++....++.++..+-..+.+ ....|+.+. .|+...+ -+..++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHRtp~~l~----------~~~~~~~-~~g~~V- 63 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVS--------AHRTPDKMF----------DYAETAK-ERGLKV- 63 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECC--------TTTCHHHHH----------HHHHHTT-TTTCCE-
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc--------CcCCHHHHH----------HHHHHHH-hCCCcE-
Confidence 45777788877 3466777888888888765444443 233666542 1111110 012344
Q ss_pred ccccccCc-h---hHHHHHhhCCceeccccccc---hhhhHHHHhhhhcce--eee---CC--ccCHHHHHHHHHHHhcc
Q 040486 354 GFWTHCGW-N---STLESICEGVPMICQPCFGD---QMVNARYVSDVWKVG--LHL---ER--KLERGEVERTIRRVMTE 419 (460)
Q Consensus 354 ~~I~HgG~-g---s~~eal~~GvP~v~~P~~~D---Q~~na~~v~~~~G~g--~~~---~~--~~~~~~l~~~i~~ll~~ 419 (460)
+|.=+|. + ++..+ ..-+|+|.+|...- -.+--.-+.+ +-.| +.. +. ..+...++..|.. +.|
T Consensus 64 -iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vq-mp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~d 139 (166)
T 3oow_A 64 -IIAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQ-MPAGIPVATFAIGMAGAKNAALFAASILQ-HTD 139 (166)
T ss_dssp -EEEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHT-CCTTSCCEECCSTHHHHHHHHHHHHHHHG-GGC
T ss_pred -EEEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhc-CCCCCceEEEecCCccchHHHHHHHHHHc-CCC
Confidence 8877664 2 33333 23579999998532 1111122333 3333 222 21 2344555555533 367
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcC
Q 040486 420 AEGQEIRVRIMILKEKLNLCLIQG 443 (460)
Q Consensus 420 ~~~~~~~~~a~~~~~~~~~~~~~~ 443 (460)
+.++++.+.+++++++...+.
T Consensus 140 ---~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 140 ---INIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999888655443
No 186
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=37.55 E-value=26 Score=29.72 Aligned_cols=34 Identities=18% Similarity=0.171 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
||+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 677888866542 3468899999999999888653
No 187
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=37.45 E-value=22 Score=32.94 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+|||.|+-.|..|. .+|..|+++||+|++....
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 358999998877764 5889999999999998764
No 188
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=37.41 E-value=21 Score=32.77 Aligned_cols=38 Identities=5% Similarity=0.034 Sum_probs=28.2
Q ss_pred CCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHI----NPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~----~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
++|||+++..|..+-. .....++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 4789998875433322 2567789999999999998864
No 189
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=37.16 E-value=24 Score=32.18 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|||.|+-.|..| ..+|..|.++||+|+++..
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 5999999887777 4788999999999999865
No 190
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=37.10 E-value=37 Score=26.37 Aligned_cols=38 Identities=13% Similarity=0.324 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQ-LANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~-La~~L~~~Gh~Vt~~~~~ 51 (460)
||||+++-....|+..-+.. |++.|.++|++|.++...
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 46777665556787765444 577787889999988664
No 191
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=36.94 E-value=54 Score=24.15 Aligned_cols=37 Identities=14% Similarity=0.005 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-..
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 4899999998888886666777788888988765433
No 192
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=36.83 E-value=55 Score=28.02 Aligned_cols=108 Identities=4% Similarity=-0.021 Sum_probs=58.7
Q ss_pred cCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCCCCCC---CCCCCCeeEEecCC-CCCCcccccccH
Q 040486 9 IHQKKGRRLILFPLPLQGHINPMLQLANILYSK--GFSITIIHTNFNSPN---PSNYPHFTFCSIED-SLSETEASTADL 82 (460)
Q Consensus 9 ~~~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~--Gh~Vt~~~~~~~~~~---~~~~~g~~~~~~~~-~~~~~~~~~~~~ 82 (460)
.....+|||+|+.+|+.. -+.++.++|.+. +++|..+.+...... .....|+.+..++. .+.. .
T Consensus 17 ~~~~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~----r--- 86 (229)
T 3auf_A 17 YFQGHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPS----R--- 86 (229)
T ss_dssp SCBTTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSS----H---
T ss_pred cccCCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccc----h---
Confidence 334556899999876643 366777788776 688877665422111 01114777775532 1110 0
Q ss_pred HHHHHHHHHhcchhHH-HHHHHHhcccccccCCCeeEEEecCCc-hhHHHHHHHcCCceEEEecc
Q 040486 83 VALLSLLNVQCVVPFR-NCLAKLLSNVEEEEKEPIACLITDATW-YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 83 ~~~~~~~~~~~~~~l~-~~l~~l~~~~~~~~~~kpD~VI~D~~~-~~~~~~A~~lgiP~v~~~~~ 145 (460)
..+. ++++.+.+ .+||+||+-.+. .....+-....-.++-+.++
T Consensus 87 ------------~~~~~~~~~~l~~-------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 87 ------------TAFDAALAERLQA-------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ------------HHHHHHHHHHHHH-------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ------------hhccHHHHHHHHh-------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 1111 12333333 469999988753 33334445555566666555
No 193
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=36.73 E-value=46 Score=28.96 Aligned_cols=34 Identities=9% Similarity=0.031 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 10 TDKVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TTCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 3577788866554 346889999999999988764
No 194
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=36.67 E-value=44 Score=30.16 Aligned_cols=34 Identities=6% Similarity=0.074 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSK-G-FSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~-G-h~Vt~~~~~ 51 (460)
|.+|||+++..+.. +++++.|+++ | ++|.++...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 56799999876654 4799999986 7 888887654
No 195
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=36.66 E-value=37 Score=25.14 Aligned_cols=40 Identities=15% Similarity=0.034 Sum_probs=28.2
Q ss_pred cCCCCCcEEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEEE
Q 040486 9 IHQKKGRRLILFPLPLQGHINPML-QLANILYSKGFS-ITII 48 (460)
Q Consensus 9 ~~~~~~~~vl~~~~~~~GH~~p~l-~La~~L~~~Gh~-Vt~~ 48 (460)
+....++||+++|..+.|.-.-.. .+-+.+.+.|.+ +.+-
T Consensus 13 ~~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~ 54 (110)
T 3czc_A 13 MGRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESA 54 (110)
T ss_dssp -----CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred ccccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 334456889999999999888777 677778888987 6543
No 196
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=36.36 E-value=44 Score=30.00 Aligned_cols=67 Identities=12% Similarity=0.010 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHH
Q 040486 288 ETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLES 367 (460)
Q Consensus 288 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~ea 367 (460)
.+.+..+...+++.+..+.+...... .+..+ +. .++....++ +|.-||=||+.|+
T Consensus 25 ~~~~~~i~~~l~~~~~~~~~~~t~~~-----------~~a~~-------~~-----~~~~~~~d~--vv~~GGDGTl~~v 79 (304)
T 3s40_A 25 HTNLTKIVPPLAAAFPDLHILHTKEQ-----------GDATK-------YC-----QEFASKVDL--IIVFGGDGTVFEC 79 (304)
T ss_dssp HHHHHHHHHHHHHHCSEEEEEECCST-----------THHHH-------HH-----HHHTTTCSE--EEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEEccCc-----------chHHH-------HH-----HHhhcCCCE--EEEEccchHHHHH
Confidence 45566777888887777665544321 11110 00 011124566 9999999999998
Q ss_pred Hh------hCCceecccc
Q 040486 368 IC------EGVPMICQPC 379 (460)
Q Consensus 368 l~------~GvP~v~~P~ 379 (460)
+. .++|+.++|.
T Consensus 80 ~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 80 TNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHTTCSSCCEEEEEEC
T ss_pred HHHHhhCCCCCcEEEecC
Confidence 64 5789999997
No 197
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=36.10 E-value=13 Score=32.97 Aligned_cols=28 Identities=14% Similarity=0.158 Sum_probs=24.0
Q ss_pred CCCcccccccCchhHHHHHhh------CCceecccc
Q 040486 350 PATGGFWTHCGWNSTLESICE------GVPMICQPC 379 (460)
Q Consensus 350 ~~~~~~I~HgG~gs~~eal~~------GvP~v~~P~ 379 (460)
+++ +|.=||=||+.+++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 466 9999999999999775 889988875
No 198
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=35.93 E-value=42 Score=28.87 Aligned_cols=33 Identities=15% Similarity=0.048 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
||+++++.++. - =-..+|+.|+++|++|+++.-
T Consensus 1 mk~vlVTGas~-g--IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCAT-G--IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 56777775543 2 346789999999999998764
No 199
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=35.81 E-value=52 Score=24.67 Aligned_cols=37 Identities=8% Similarity=0.005 Sum_probs=27.5
Q ss_pred EEEEE-cCCCccCH--HHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 16 RLILF-PLPLQGHI--NPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 16 ~vl~~-~~~~~GH~--~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
|++++ +.+-+|+. .-.+.+|.++...||+|.++-...
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~D 42 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIAD 42 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehH
Confidence 45544 55556766 667889999999999999887753
No 200
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=35.78 E-value=31 Score=25.23 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKG-FSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~G-h~Vt~~~~~ 51 (460)
+++|+++-. |.+- ..+++.|.++| ++|+++...
T Consensus 5 ~~~v~I~G~---G~iG--~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGA---GKIG--QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECC---SHHH--HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECC---CHHH--HHHHHHHHhCCCceEEEEeCC
Confidence 467887743 4332 46789999999 999887653
No 201
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=35.76 E-value=12 Score=19.12 Aligned_cols=17 Identities=24% Similarity=0.583 Sum_probs=14.6
Q ss_pred CchhHHHHHhhCCceec
Q 040486 360 GWNSTLESICEGVPMIC 376 (460)
Q Consensus 360 G~gs~~eal~~GvP~v~ 376 (460)
|.|++.-.|+.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888999999999876
No 202
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=35.59 E-value=40 Score=25.13 Aligned_cols=65 Identities=8% Similarity=0.016 Sum_probs=45.3
Q ss_pred hccCCCcccccccCchh---------HHHHHhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHh
Q 040486 347 LAHPATGGFWTHCGWNS---------TLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVM 417 (460)
Q Consensus 347 l~~~~~~~~I~HgG~gs---------~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll 417 (460)
++.+++ +|--.|..| +..|...|+|++.+=..+.+. .-..+++. +.-+. .+|.+.|.++|+..+
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~-a~~iV---~Wn~~~I~~aI~~~~ 108 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV-SSEVV---GWNPHCIRDALEDAL 108 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH-CSEEE---CSCHHHHHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh-Cceec---cCCHHHHHHHHHhcc
Confidence 456777 898999887 667888999999987777542 22224442 22211 488999999998875
Q ss_pred c
Q 040486 418 T 418 (460)
Q Consensus 418 ~ 418 (460)
.
T Consensus 109 ~ 109 (111)
T 1eiw_A 109 D 109 (111)
T ss_dssp C
T ss_pred C
Confidence 4
No 203
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=35.30 E-value=35 Score=29.95 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|||+++- + |.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--H-GYTA--RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--C-CHHH--HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--C-cHHH--HHHHHHHHHCCCEEEEEEcC
Confidence 47877763 5 6554 46789999999999998753
No 204
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=35.22 E-value=1.8e+02 Score=23.47 Aligned_cols=137 Identities=13% Similarity=0.143 Sum_probs=76.4
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCC
Q 040486 273 KSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPAT 352 (460)
Q Consensus 273 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~ 352 (460)
+|.|-|-+||.+ .....++....++.++..+-..+.+ ....|+.+. .|+...+ -+..++
T Consensus 6 ~~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~S--------aHR~p~~~~----------~~~~~a~-~~g~~V 64 (169)
T 3trh_A 6 KIFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILS--------AHRTPKETV----------EFVENAD-NRGCAV 64 (169)
T ss_dssp CCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECC--------TTTSHHHHH----------HHHHHHH-HTTEEE
T ss_pred CCcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEc--------ccCCHHHHH----------HHHHHHH-hCCCcE
Confidence 345777788876 3466777888888988776555543 233666542 1111110 122344
Q ss_pred cccccccCc-h---hHHHHHhhCCceeccccccchh-hhH--HHHhh--hhccee---eeCC--ccCHHHHHHHHHHHhc
Q 040486 353 GGFWTHCGW-N---STLESICEGVPMICQPCFGDQM-VNA--RYVSD--VWKVGL---HLER--KLERGEVERTIRRVMT 418 (460)
Q Consensus 353 ~~~I~HgG~-g---s~~eal~~GvP~v~~P~~~DQ~-~na--~~v~~--~~G~g~---~~~~--~~~~~~l~~~i~~ll~ 418 (460)
+|.=+|. + ++..+ ..-+|+|.+|...-.. ... .-+.+ . |+.+ .++. ..+...++..|.. +.
T Consensus 65 --iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~-GvPVatV~I~~a~~~nAa~lAa~Il~-~~ 139 (169)
T 3trh_A 65 --FIAAAGLAAHLAGTIAA-HTLKPVIGVPMAGGSLGGLDALLSTVQMPG-GVPVACTAIGKAGAKNAAILAAQIIA-LQ 139 (169)
T ss_dssp --EEEEECSSCCHHHHHHH-TCSSCEEEEECCCSTTTTHHHHHHHHCCCT-TSCCEECCSTHHHHHHHHHHHHHHHH-TT
T ss_pred --EEEECChhhhhHHHHHh-cCCCCEEEeecCCCCCCCHHHHHHhhcCCC-CCceEEEecCCccchHHHHHHHHHHc-CC
Confidence 7777664 2 33333 2357999999863211 222 22222 2 4421 1221 2455556555543 46
Q ss_pred cchHHHHHHHHHHHHHHHHH
Q 040486 419 EAEGQEIRVRIMILKEKLNL 438 (460)
Q Consensus 419 ~~~~~~~~~~a~~~~~~~~~ 438 (460)
| +.++++.+.+++++++
T Consensus 140 d---~~l~~kl~~~r~~~~~ 156 (169)
T 3trh_A 140 D---KSIAQKLVQQRTAKRE 156 (169)
T ss_dssp C---HHHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHHHH
Confidence 7 7899999988888875
No 205
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=35.20 E-value=67 Score=29.06 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCcc---CH--HHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQG---HI--NPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~G---H~--~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+..|++.|....+ .+ .-+.++++.|.++|.+|.+++.+
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~ 222 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSA 222 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCG
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeCh
Confidence 3456777754222 23 36889999999999998887554
No 206
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=35.09 E-value=25 Score=31.98 Aligned_cols=34 Identities=18% Similarity=0.288 Sum_probs=25.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
++.+||.|+-.|..| ..+|..|+++||+|+++..
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~ 37 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDI 37 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 456899999877766 4678899999999998855
No 207
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=34.99 E-value=24 Score=31.85 Aligned_cols=32 Identities=13% Similarity=0.020 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|||+++-.|+.|- .+|..|. +||+|+++...
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECC
Confidence 38999998887775 5678888 99999999764
No 208
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=34.88 E-value=43 Score=27.33 Aligned_cols=76 Identities=7% Similarity=0.127 Sum_probs=41.5
Q ss_pred cccccChh-hh-hccCCCcccccccCchhHHHH---HhhCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHH
Q 040486 337 MVKWAPQQ-EV-LAHPATGGFWTHCGWNSTLES---ICEGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVER 411 (460)
Q Consensus 337 v~~~vp~~-~~-l~~~~~~~~I~HgG~gs~~ea---l~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~ 411 (460)
+.+..+.. .+ ...++. .++--||.||+.|+ +.+++|++.+|.+. .....+... -... +...-+++++.+
T Consensus 93 ~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~-i~~~~~~~e~~~ 166 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGL-VHVAADVAGAIA 166 (176)
T ss_dssp ECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTT-EEEESSHHHHHH
T ss_pred EcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCe-EEEcCCHHHHHH
Confidence 34555543 33 334444 46667899986654 67999999999832 111112111 1110 111346777777
Q ss_pred HHHHHhc
Q 040486 412 TIRRVMT 418 (460)
Q Consensus 412 ~i~~ll~ 418 (460)
.+.+.+.
T Consensus 167 ~l~~~~~ 173 (176)
T 2iz6_A 167 AVKQLLA 173 (176)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 209
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=34.87 E-value=51 Score=29.20 Aligned_cols=38 Identities=5% Similarity=-0.064 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQ-GHIN---PMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~-GH~~---p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478998876532 2322 4468999999999999998765
No 210
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=34.77 E-value=26 Score=29.41 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+++- +.|-+- ..++++|.++||+|+.++-.
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEECC
Confidence 6776653 334333 57899999999999998764
No 211
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=34.50 E-value=97 Score=23.14 Aligned_cols=49 Identities=10% Similarity=0.077 Sum_probs=30.5
Q ss_pred hCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhcc
Q 040486 370 EGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
..+|+|++--..|.......+... |+--.+.+.++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~~~-ga~~~l~KP~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAINDA-GIHQFLTKPWHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHHHT-TCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHhh-chhhhccCCCCHHHHHHHHHHHHHH
Confidence 356776654444433333444442 5544454568999999999999875
No 212
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=34.37 E-value=26 Score=31.09 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+|||.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHHHTCCEEEECS
T ss_pred CCeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcC
Confidence 46899998777774 578899999999998754
No 213
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=34.21 E-value=32 Score=30.81 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|+++ |+.|.+ -..++++|.++||+|+.++-.
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECC
Confidence 55554 444555 356889999999999988764
No 214
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=34.20 E-value=15 Score=33.07 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSK-----G-FSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~-----G-h~Vt~~~~ 50 (460)
+|||+|+-.|..|. .+|..|.++ | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 48999998777774 568888888 9 99999865
No 215
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=34.17 E-value=33 Score=35.25 Aligned_cols=108 Identities=9% Similarity=-0.002 Sum_probs=73.3
Q ss_pred cccChhhhhccCCCcccccccCchhHHHHHhhCCceeccccccchhhhHHHHhhhhcceeee----CC--ccCHHHHHHH
Q 040486 339 KWAPQQEVLAHPATGGFWTHCGWNSTLESICEGVPMICQPCFGDQMVNARYVSDVWKVGLHL----ER--KLERGEVERT 412 (460)
Q Consensus 339 ~~vp~~~~l~~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~----~~--~~~~~~l~~~ 412 (460)
++.+-.++|..+|+ +||=- ...+.|.+..++|+|....-.|+... +.. |.=... .. -.+.++|.++
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~----~~r-g~y~d~~~~~pg~~~~~~~eL~~~ 676 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDK----GLR-GFYMNYMEDLPGPIYTEPYGLAKE 676 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTS----SCC-SBSSCTTSSSSSCEESSHHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhh----ccC-CcccChhHhCCCCeECCHHHHHHH
Confidence 45566789999999 99874 45788999999999987765555432 111 332211 11 4678899999
Q ss_pred HHHHhccchHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 413 IRRVMTEAEGQEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 413 i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
|.....+. ..|+++.+++.+++-. .+.|.++++.++.+++..
T Consensus 677 i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 677 LKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHH
T ss_pred Hhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcC
Confidence 88876531 5778888888887753 245667777777776654
No 216
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=33.86 E-value=26 Score=29.60 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+|||+++-.|..| ..+++.|.++||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 46899999655444 3578889999999998754
No 217
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=33.81 E-value=44 Score=32.34 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=30.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSK-GF-SITIIHTNF 52 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~-Gh-~Vt~~~~~~ 52 (460)
++.|||.++-.|..| +++|..|+++ || +|+++....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 457999999888887 5789999999 99 999986543
No 218
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=33.80 E-value=24 Score=32.68 Aligned_cols=34 Identities=12% Similarity=0.134 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+++|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 345899999776655 4778999999999998854
No 219
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=33.73 E-value=16 Score=33.01 Aligned_cols=32 Identities=9% Similarity=-0.019 Sum_probs=24.3
Q ss_pred hhccCCCcccccccCchhHHHHHhh----CCceecccc
Q 040486 346 VLAHPATGGFWTHCGWNSTLESICE----GVPMICQPC 379 (460)
Q Consensus 346 ~l~~~~~~~~I~HgG~gs~~eal~~----GvP~v~~P~ 379 (460)
....+++ +|.-||-||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4456788 9999999999999854 889988874
No 220
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=33.65 E-value=52 Score=27.34 Aligned_cols=42 Identities=12% Similarity=0.100 Sum_probs=33.5
Q ss_pred hhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEeccc
Q 040486 95 VPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTNS 146 (460)
Q Consensus 95 ~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~~ 146 (460)
..+...++++.+ ...|+||.|. .+..+|+++|+|.+.+.++.
T Consensus 129 ~e~~~~i~~l~~-------~G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 129 DEITTLISKVKT-------ENIKIVVSGK---TVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGHHHHHHHHHH-------TTCCEEEECH---HHHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHH-------CCCeEEECCH---HHHHHHHHcCCcEEEEecCH
Confidence 456678888877 5799999985 34689999999999988753
No 221
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=33.56 E-value=29 Score=32.49 Aligned_cols=41 Identities=12% Similarity=0.098 Sum_probs=26.9
Q ss_pred ccccCCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 6 DSHIHQKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 6 ~~~~~~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++.....+.++|+++-.|-. -+.+|..|+++|++|+++-..
T Consensus 15 ~~~~~~~~~~dV~IVGaG~a-----Gl~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 15 GENLYFQGHMKAIVIGAGIG-----GLSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp --------CCEEEEECCSHH-----HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcccCCCCCEEEEECCCHH-----HHHHHHHHHhCCCCEEEEeCC
Confidence 34444556799999876533 488899999999999999553
No 222
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=33.44 E-value=31 Score=30.62 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
+|||+|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 48999997777774 46888999999998764
No 223
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=33.41 E-value=21 Score=33.04 Aligned_cols=40 Identities=8% Similarity=0.021 Sum_probs=28.3
Q ss_pred CCCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHI----NPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~----~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|++|||+++..|..+-. .....++++|.++||+|..+...
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 35789999886533322 34578899999999999988653
No 224
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=33.35 E-value=71 Score=27.21 Aligned_cols=32 Identities=6% Similarity=0.048 Sum_probs=23.6
Q ss_pred CCeeEEEecCCchh-------HHHHHHHcCCceEEEecc
Q 040486 114 EPIACLITDATWYF-------TQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 114 ~kpD~VI~D~~~~~-------~~~~A~~lgiP~v~~~~~ 145 (460)
.+||+|++|..... |..+...+++|+|.+.=+
T Consensus 102 ~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK~ 140 (225)
T 2w36_A 102 TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKS 140 (225)
T ss_dssp SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEec
Confidence 47999999986533 344566679999997654
No 225
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=33.26 E-value=18 Score=32.29 Aligned_cols=33 Identities=12% Similarity=-0.025 Sum_probs=26.4
Q ss_pred hhhccCCCcccccccCchhHHHHHhh----CCceecccc
Q 040486 345 EVLAHPATGGFWTHCGWNSTLESICE----GVPMICQPC 379 (460)
Q Consensus 345 ~~l~~~~~~~~I~HgG~gs~~eal~~----GvP~v~~P~ 379 (460)
++-..+++ +|.=||=||+.+++.. ++|++.++.
T Consensus 59 ~~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 59 EIGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred hcccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 34445788 9999999999999843 789988874
No 226
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=33.22 E-value=46 Score=29.05 Aligned_cols=36 Identities=8% Similarity=0.125 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+..+|+++++.++.| =-..+|++|+++|++|.+...
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 455788888866543 346899999999999987744
No 227
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=33.08 E-value=43 Score=30.34 Aligned_cols=34 Identities=9% Similarity=0.077 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+|||+|+-.+.++- +..++|.++||+|..+.+..
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~p 35 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYTQP 35 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEECCC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEeCC
Confidence 48999998876653 45678888999998877753
No 228
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=33.06 E-value=24 Score=32.01 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 689998776666 3568889999999999865
No 229
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=32.77 E-value=42 Score=29.55 Aligned_cols=36 Identities=14% Similarity=0.071 Sum_probs=25.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+.+.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 445678888876653 346789999999999988765
No 230
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=32.66 E-value=72 Score=28.97 Aligned_cols=81 Identities=14% Similarity=-0.077 Sum_probs=0.0
Q ss_pred CCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCC
Q 040486 272 PKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPA 351 (460)
Q Consensus 272 ~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~ 351 (460)
.+-.|++.--+... +.+..+...+++.+..+.+...... .-..-+-...+...++
T Consensus 30 ~~~~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~~----------------------~~~~~~~~~~~~~~~d 84 (332)
T 2bon_A 30 PASLLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWEK----------------------GDAARYVEEARKFGVA 84 (332)
T ss_dssp CCEEEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCST----------------------THHHHHHHHHHHHTCS
T ss_pred ceEEEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecCc----------------------chHHHHHHHHHhcCCC
Q ss_pred CcccccccCchhHHHHH--------hhCCceecccc
Q 040486 352 TGGFWTHCGWNSTLESI--------CEGVPMICQPC 379 (460)
Q Consensus 352 ~~~~I~HgG~gs~~eal--------~~GvP~v~~P~ 379 (460)
+ +|.-||=||+.|++ ..++|+.++|.
T Consensus 85 ~--vvv~GGDGTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 85 T--VIAGGGDGTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp E--EEEEESHHHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred E--EEEEccchHHHHHHHHHhhcccCCCCeEEEecC
No 231
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=32.60 E-value=82 Score=28.95 Aligned_cols=26 Identities=23% Similarity=0.457 Sum_probs=20.7
Q ss_pred cCCCcccccccCchhH---HHHHhhCCceec
Q 040486 349 HPATGGFWTHCGWNST---LESICEGVPMIC 376 (460)
Q Consensus 349 ~~~~~~~I~HgG~gs~---~eal~~GvP~v~ 376 (460)
++|+ +|++||.-++ ..|-..|+|+++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 6788 9999998764 456678999986
No 232
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=32.51 E-value=13 Score=35.86 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|||+++-.|-.| ..||+.|.+.||+|+++-..
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5999999877666 46899999999999999664
No 233
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=32.21 E-value=39 Score=29.17 Aligned_cols=33 Identities=9% Similarity=-0.124 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
||+++++.++.| + -..+|+.|+++|++|.++.-
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 577888865543 3 35789999999999887643
No 234
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=32.11 E-value=1.2e+02 Score=27.75 Aligned_cols=98 Identities=9% Similarity=-0.058 Sum_probs=54.9
Q ss_pred CcEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCC---CCCeeEEecCCCCCCcccccccHHHHH
Q 040486 14 GRRLILFPLPLQG--H--INPMLQLANILYSKGFSITIIHTNFNSPNPSN---YPHFTFCSIEDSLSETEASTADLVALL 86 (460)
Q Consensus 14 ~~~vl~~~~~~~G--H--~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (460)
+..|++.|..+.. . ..-+.++++.|.++|++|.+++.+...+.... ..+-....+ ...
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l--------~g~------- 249 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMETKPIVA--------TGK------- 249 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSSCCEEC--------TTC-------
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhcccccEEe--------eCC-------
Confidence 3456677765432 2 34589999999999999988655422111000 000000111 001
Q ss_pred HHHHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecc
Q 040486 87 SLLNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 87 ~~~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~ 145 (460)
..+.++..-+. +.|++|+.. .+...+|..+|+|+|.++..
T Consensus 250 --------~sl~e~~ali~---------~a~~~i~~D--sG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 250 --------FQLGPLAAAMN---------RCNLLITND--SGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp --------CCHHHHHHHHH---------TCSEEEEES--SHHHHHHHTTTCCEEEECSS
T ss_pred --------CCHHHHHHHHH---------hCCEEEECC--CCHHHHHHhcCCCEEEEECC
Confidence 11233333332 579999864 34567799999999997654
No 235
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=32.08 E-value=34 Score=30.32 Aligned_cols=31 Identities=26% Similarity=0.369 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 789999776655 4678999999999998754
No 236
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=32.03 E-value=47 Score=27.32 Aligned_cols=37 Identities=11% Similarity=0.128 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQ-LANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~-La~~L~~~Gh~Vt~~~~ 50 (460)
++|||+++-.. .|+..-+.. +++.|.+.|++|.++.-
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l 40 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRV 40 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEeh
Confidence 35899888766 887665554 45666668999998854
No 237
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=31.96 E-value=35 Score=28.44 Aligned_cols=31 Identities=26% Similarity=0.169 Sum_probs=23.0
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFP-LPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~-~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||+++- .|..| ..+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 6888874 44444 3578899999999998754
No 238
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=31.78 E-value=38 Score=29.98 Aligned_cols=33 Identities=18% Similarity=0.159 Sum_probs=26.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+.+||+++-.|..| ..+|..|+++||+|+++..
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 45789999666655 4688999999999998744
No 239
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.75 E-value=36 Score=28.54 Aligned_cols=34 Identities=21% Similarity=0.443 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|+|+++ |+.|.+- ..|++.|.++||+|+.++-.
T Consensus 4 m~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 4677665 3445443 57899999999999998764
No 240
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=31.75 E-value=49 Score=29.36 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
++|||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 358999998777775 468889999999987644
No 241
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=31.70 E-value=50 Score=26.54 Aligned_cols=39 Identities=13% Similarity=0.238 Sum_probs=30.7
Q ss_pred CCcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQ---GHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~---GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..-+|+++|.-+. --..+...|++.|.++|.+|.|..+|
T Consensus 22 ~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 63 (180)
T 1pno_A 22 NASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 63 (180)
T ss_dssp TCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 3578888884322 13467899999999999999999996
No 242
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=31.49 E-value=50 Score=30.14 Aligned_cols=68 Identities=7% Similarity=-0.047 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHH
Q 040486 288 ETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLES 367 (460)
Q Consensus 288 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~ea 367 (460)
.+.+..+...+++.+..+.+...... .... .. -.......+++ +|.=||=||+.|+
T Consensus 41 ~~~~~~i~~~L~~~g~~~~~~~t~~~-----------~~a~----------~~-~~~~~~~~~d~--vvv~GGDGTv~~v 96 (337)
T 2qv7_A 41 KRELPDALIKLEKAGYETSAYATEKI-----------GDAT----------LE-AERAMHENYDV--LIAAGGDGTLNEV 96 (337)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEECCST-----------THHH----------HH-HHHHTTTTCSE--EEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCeEEEEEecCc-----------chHH----------HH-HHHHhhcCCCE--EEEEcCchHHHHH
Confidence 35567788888887766544433211 1110 00 01112234566 9999999999998
Q ss_pred Hh------hCCceecccc
Q 040486 368 IC------EGVPMICQPC 379 (460)
Q Consensus 368 l~------~GvP~v~~P~ 379 (460)
+. .++|+.++|.
T Consensus 97 ~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 97 VNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHTTCSSCCEEEEEEC
T ss_pred HHHHHhCCCCCcEEEecC
Confidence 63 4679999997
No 243
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=31.48 E-value=58 Score=28.61 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| + -..+|++|+++|++|.++.-
T Consensus 29 gk~vlVTGas~g-I--G~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 29 GKVAIVTGAGAG-I--GLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp TCEEEETTTTST-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 577888865543 3 35789999999999988764
No 244
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=31.46 E-value=29 Score=26.56 Aligned_cols=33 Identities=15% Similarity=0.315 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.||+++-. |.+- ..+++.|.+.|++|+++...
T Consensus 6 ~~~v~I~G~---G~iG--~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGL---GRFG--GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECC---SHHH--HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 456887754 4333 46789999999999988663
No 245
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=31.46 E-value=2.3e+02 Score=23.64 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSP 55 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~ 55 (460)
+++|+++++. +..|....--..|.++|.+|.=+++.....
T Consensus 24 ~~Lr~avVCa---SN~NRSMEAH~~L~k~Gf~V~SfGTGs~Vk 63 (214)
T 4h3k_B 24 SPLRVAVVSS---SNQNRSMEAHNILSKRGFSVRSFGTGTHVK 63 (214)
T ss_dssp --CEEEEEES---SSSSHHHHHHHHHHHTTCEEEEEECSSSEE
T ss_pred CCCeEEEECC---CCcchhHHHHHHHHHCCCceEeecCCCccC
Confidence 4699999885 678899999999999999999988875443
No 246
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=31.43 E-value=44 Score=29.70 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|+|+++ |+.|.+- ..++++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 4676665 3445553 46789999999999988653
No 247
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=31.43 E-value=29 Score=32.47 Aligned_cols=42 Identities=12% Similarity=0.059 Sum_probs=29.8
Q ss_pred CCCCCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 040486 10 HQKKGRRLILFPLPLQGHI----NPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 10 ~~~~~~~vl~~~~~~~GH~----~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..|++|||+++..|..+-- .....++++|.+.||+|+.+...
T Consensus 18 ~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 18 GHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp ---CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 3467899999887755443 33458889998899999988753
No 248
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=31.40 E-value=28 Score=32.60 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=26.9
Q ss_pred hhhhhccCCCcccccccCchhHHHHHhh----CC-ceecccc
Q 040486 343 QQEVLAHPATGGFWTHCGWNSTLESICE----GV-PMICQPC 379 (460)
Q Consensus 343 ~~~~l~~~~~~~~I~HgG~gs~~eal~~----Gv-P~v~~P~ 379 (460)
..++-..+|+ +|+=||=||+..++.. ++ |++.+..
T Consensus 108 ~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~ 147 (388)
T 3afo_A 108 EQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFAL 147 (388)
T ss_dssp HHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEEC
T ss_pred hhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEEC
Confidence 3455567888 9999999999999654 57 7887653
No 249
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=31.39 E-value=33 Score=31.04 Aligned_cols=32 Identities=6% Similarity=-0.007 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKG-FSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~G-h~Vt~~~~ 50 (460)
.|||.|+-.|..| ..+|+.|+++| |+|+++..
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 3799999877666 67899999999 99998755
No 250
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=31.22 E-value=39 Score=29.11 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=26.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
...+||.|+-.|..| ..+|+.|+++||+|++....
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 346999999766655 45789999999999998653
No 251
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=31.13 E-value=45 Score=31.73 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||+++-.|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 689998766666 4688899999999998854
No 252
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=30.97 E-value=52 Score=26.55 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQ---GHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~---GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.-+|+++|.-+. --..+...|++.|.++|.+|.|..+|
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHP 62 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHP 62 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 578888884322 13467899999999999999999996
No 253
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=30.91 E-value=42 Score=26.67 Aligned_cols=38 Identities=16% Similarity=0.108 Sum_probs=30.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFN 53 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~ 53 (460)
+..+++++..|. | +.|++++++.|.++|.+|+++ ....
T Consensus 22 ~~~~~llIaGG~-G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 22 KFGKILAIGAYT-G-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CCSEEEEEEETT-H-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCCeEEEEEccC-c-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 356888888554 3 999999999999999999998 5443
No 254
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=30.47 E-value=29 Score=31.05 Aligned_cols=32 Identities=16% Similarity=0.051 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+|||.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 57999998877774 678999999999998854
No 255
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=30.40 E-value=49 Score=29.94 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++|||+|+..+.++ ....++|.++||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 36999999875433 45557777889999877765
No 256
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=30.28 E-value=54 Score=28.16 Aligned_cols=38 Identities=21% Similarity=0.190 Sum_probs=30.6
Q ss_pred cEEEEE--cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILF--PLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~--~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+||+.+ +-|+-|-..-...||..|+++|++|.++-.+.
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 566555 34577888999999999999999999987654
No 257
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=30.24 E-value=60 Score=28.32 Aligned_cols=35 Identities=11% Similarity=0.178 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..|+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 44 (271)
T 3tzq_B 10 ENKVAIITGACGG---IGLETSRVLARAGARVVLADLP 44 (271)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECT
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEcCC
Confidence 3577888866543 2468899999999999887653
No 258
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=30.19 E-value=1.4e+02 Score=25.68 Aligned_cols=35 Identities=11% Similarity=0.059 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.-|++++|.++.| =-.++|+.|+++|.+|.+..-.
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~Vv~~~~~ 44 (242)
T 4b79_A 10 AGQQVLVTGGSSG---IGAAIAMQFAELGAEVVALGLD 44 (242)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 3689999987775 3578999999999999988653
No 259
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=29.94 E-value=67 Score=27.74 Aligned_cols=34 Identities=26% Similarity=0.323 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+||.++++.++.| + -..+|++|+++|++|.++..
T Consensus 6 ~~k~vlVTGas~g-I--G~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 6 FVRHALITAGTKG-L--GKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp CCCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCEEEEeCCCch-h--HHHHHHHHHHCCCEEEEEcC
Confidence 5788888865542 2 46899999999999998754
No 260
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=29.86 E-value=32 Score=33.51 Aligned_cols=34 Identities=9% Similarity=0.261 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++.||+++-.|.-| +.+|+.|.++|++||++...
T Consensus 41 ~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~ 74 (502)
T 4g6h_A 41 DKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPR 74 (502)
T ss_dssp SSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESS
T ss_pred CCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCC
Confidence 46799999765433 57899999999999999874
No 261
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=29.81 E-value=34 Score=30.40 Aligned_cols=31 Identities=19% Similarity=0.300 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||.|+-.|..|. .+|+.|.++||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 6899998777775 578889999999988754
No 262
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=29.76 E-value=15 Score=32.84 Aligned_cols=32 Identities=16% Similarity=0.045 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||+++-.|+.|- .+|..|.++||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 7999998887774 5788899999999999764
No 263
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=29.72 E-value=30 Score=33.42 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|++|+|.|+-.|..| ..+|..|+++||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 456899999877766 4578899999999988754
No 264
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=29.67 E-value=63 Score=26.93 Aligned_cols=35 Identities=20% Similarity=0.141 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILY-SKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~-~~Gh~Vt~~~~~ 51 (460)
+||.++++. +.|-+ -..+++.|. ++||+|+.+.-.
T Consensus 4 mmk~vlVtG-asg~i--G~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITILG-AAGQI--AQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SCSEEEEES-TTSHH--HHHHHHHHHHHCCCEEEEEESS
T ss_pred eEEEEEEEe-CCcHH--HHHHHHHHHhcCCceEEEEecC
Confidence 467555553 33433 368899999 899999988654
No 265
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=29.66 E-value=81 Score=24.36 Aligned_cols=37 Identities=11% Similarity=0.125 Sum_probs=27.1
Q ss_pred EEEEE-cCCCccCHHH--HHHHHHHHHhCCCeEEEEeCCC
Q 040486 16 RLILF-PLPLQGHINP--MLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 16 ~vl~~-~~~~~GH~~p--~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
|++++ +.+-+|+... .+.+|.++.+.||+|+++-...
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~D 46 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDD 46 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhH
Confidence 47655 5555676444 5777999999999999987763
No 266
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=29.57 E-value=59 Score=28.98 Aligned_cols=37 Identities=11% Similarity=0.073 Sum_probs=30.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.|+|+.-|+-|=..-.+.||..|+++|++|.++-.+
T Consensus 42 ~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 42 KVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred eEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4455656667788889999999999999999999665
No 267
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=29.51 E-value=66 Score=28.60 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..|+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 27 ~gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~~ 61 (299)
T 3t7c_A 27 EGKVAFITGAARG---QGRSHAITLAREGADIIAIDVC 61 (299)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEecc
Confidence 4578888876653 3468899999999999987653
No 268
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=29.34 E-value=69 Score=27.28 Aligned_cols=35 Identities=6% Similarity=-0.016 Sum_probs=28.6
Q ss_pred CcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEE
Q 040486 14 GRRLILFPL--PLQGHINPMLQLANILYSKGFSITII 48 (460)
Q Consensus 14 ~~~vl~~~~--~~~GH~~p~l~La~~L~~~Gh~Vt~~ 48 (460)
+||.+|++. ..-|-..-...|++.|+++|.+|.++
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~ 39 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCL 39 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEe
Confidence 466666643 45688889999999999999999986
No 269
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=29.26 E-value=56 Score=29.37 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=24.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
...|+|+++ |+.|-+ -..|++.|.++||+|+.+.-.
T Consensus 12 ~~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 12 SMTRSALVT--GITGQD--GAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp ---CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCeEEEE--CCCChH--HHHHHHHHHHCCCeEEEEeCC
Confidence 446777665 344544 356889999999999988753
No 270
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=29.24 E-value=53 Score=29.37 Aligned_cols=34 Identities=15% Similarity=0.109 Sum_probs=24.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|+|+++ |+.|.+- ..++++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIY--GGTGYIG--KFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEE--TTTSTTH--HHHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEE--cCCchhH--HHHHHHHHhCCCcEEEEECC
Confidence 4566655 4455553 46789999999999988764
No 271
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=29.17 E-value=80 Score=27.97 Aligned_cols=46 Identities=7% Similarity=0.060 Sum_probs=27.6
Q ss_pred CccccccCCCC--CcEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 3 VLGDSHIHQKK--GRRLILFPLPLQ-GHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 3 ~~~~~~~~~~~--~~~vl~~~~~~~-GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+.|..++..+. ..|+++++.++. .-+ -..+|+.|+++|++|.++.-
T Consensus 16 ~~gp~sm~~~~~l~~k~vlVTGasg~~GI--G~~ia~~la~~G~~V~~~~r 64 (296)
T 3k31_A 16 TQGPGSMRTGMLMEGKKGVIIGVANDKSL--AWGIAKAVCAQGAEVALTYL 64 (296)
T ss_dssp -----CCCCCCTTTTCEEEEECCCSTTSH--HHHHHHHHHHTTCEEEEEES
T ss_pred ccCCccccchhccCCCEEEEEeCCCCCCH--HHHHHHHHHHCCCEEEEEeC
Confidence 34444444332 257777876543 122 45799999999999988765
No 272
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=29.13 E-value=1.2e+02 Score=24.50 Aligned_cols=39 Identities=8% Similarity=0.083 Sum_probs=30.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.++||+++.++... ..-+....+.|..+|++|+++++.
T Consensus 7 ~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (190)
T 2vrn_A 7 LTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLE 45 (190)
T ss_dssp CTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecC
Confidence 456899999876554 445666778899999999999885
No 273
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=29.05 E-value=56 Score=28.02 Aligned_cols=34 Identities=15% Similarity=0.087 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|+++++.++.| =-..+|+.|+++|++|+++.-.
T Consensus 2 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 2 NRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 467777765543 3468899999999999987653
No 274
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=28.90 E-value=56 Score=24.17 Aligned_cols=39 Identities=3% Similarity=-0.118 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.++|||++++.++.+--.-.-.+=++..++|.+|.+...
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~ 42 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSG 42 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEc
Confidence 457999999887765544344444555567999988653
No 275
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=28.87 E-value=40 Score=32.59 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
-..|||.++-.|..| +.+|..|+++||+|+++...
T Consensus 6 ~~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 345999999777666 56889999999999998653
No 276
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=28.87 E-value=44 Score=30.17 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+|+|+++ |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 12 ~~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 45787766 344444 356789999999999998753
No 277
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=28.84 E-value=30 Score=30.14 Aligned_cols=29 Identities=21% Similarity=0.216 Sum_probs=23.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITII 48 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~ 48 (460)
|||.|+-.|..|. .+|+.|.++||+|++.
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEe
Confidence 6899987666664 5789999999999884
No 278
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=28.73 E-value=64 Score=27.23 Aligned_cols=38 Identities=16% Similarity=0.180 Sum_probs=30.0
Q ss_pred cEEEEE--cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILF--PLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~--~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+|++.+ +-|+-|-..-...||..|+++|++|.++-.+.
T Consensus 2 ~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 455444 34577888899999999999999999997653
No 279
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=28.71 E-value=57 Score=28.30 Aligned_cols=36 Identities=14% Similarity=0.192 Sum_probs=30.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|+|..-|+-|-..-...||..|+++|++|.++-.+
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 455656667888899999999999999999998664
No 280
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=28.69 E-value=58 Score=28.02 Aligned_cols=35 Identities=14% Similarity=0.015 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.|+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 21 m~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 21 MSKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp -CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4577778765542 3468999999999999888653
No 281
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=28.60 E-value=64 Score=27.45 Aligned_cols=33 Identities=18% Similarity=0.142 Sum_probs=22.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
||.++++. +.|-+ -..+++.|.++||+|+++.-
T Consensus 1 Mk~vlVtG-asg~i--G~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAITG-SASGI--GAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp -CEEEEET-TTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEeC-CCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 45556664 33433 45678999999999998865
No 282
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=28.58 E-value=46 Score=29.77 Aligned_cols=30 Identities=20% Similarity=0.473 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
.||.|+-.|..|. ++|+.|.++||+|+++-
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 3899999888884 68999999999999863
No 283
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=28.49 E-value=1.5e+02 Score=27.22 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=24.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+|+|+++ |+.|-+ -..|++.|.++||+|+.+.-.
T Consensus 28 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISIT--GAGGFI--ASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEE--CCccHH--HHHHHHHHHHCCCeEEEEECC
Confidence 35666655 344444 356789999999999988754
No 284
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=28.43 E-value=59 Score=26.77 Aligned_cols=38 Identities=13% Similarity=0.237 Sum_probs=30.3
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQ---GHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~---GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..+|+++|.-+. =-..+...|++.|.++|.+|.|..+|
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 86 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHP 86 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEecc
Confidence 578999884322 23457899999999999999999996
No 285
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=28.20 E-value=31 Score=31.03 Aligned_cols=33 Identities=18% Similarity=0.232 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..|||.|+-.|..|. .+|+.|.++||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 468999997766664 689999999999998743
No 286
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=28.18 E-value=65 Score=28.23 Aligned_cols=34 Identities=24% Similarity=0.103 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 10 QDRTYLVTGGGSG---IGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3567777765543 245789999999999988764
No 287
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=27.83 E-value=81 Score=27.30 Aligned_cols=40 Identities=10% Similarity=0.160 Sum_probs=26.3
Q ss_pred CCCCcEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCeEEEEeC
Q 040486 11 QKKGRRLILFPLPLQ--GHINPMLQ-LANILYSKGFSITIIHT 50 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~--GH~~p~l~-La~~L~~~Gh~Vt~~~~ 50 (460)
.+.+|||+++....+ |.-.-++. +++.|.+.|++|.++--
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 345789988765433 54444444 56667778999998743
No 288
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=27.80 E-value=61 Score=26.77 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQ---GHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~---GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..+|+++|.-+. =-..+...|++.|.++|.+|.|..+|
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHP 85 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHP 85 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCc
Confidence 578999884322 23467889999999999999999996
No 289
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=27.71 E-value=60 Score=20.41 Aligned_cols=31 Identities=26% Similarity=0.352 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 040486 423 QEIRVRIMILKEKLNLCLIQGGSSYQSLESLISYI 457 (460)
Q Consensus 423 ~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 457 (460)
..++++...++.+++ ..|+++..+..|...|
T Consensus 5 aefkqrlaaiktrlq----alggseaelaafekei 35 (73)
T 2a3d_A 5 AEFKQRLAAIKTRLQ----ALGGSEAELAAFEKEI 35 (73)
T ss_dssp HHHHHHHHHHHHHHH----HCSSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----HhcCcHHHHHHHHHHH
Confidence 468888888888888 4666665554444433
No 290
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=27.70 E-value=48 Score=29.37 Aligned_cols=34 Identities=9% Similarity=0.152 Sum_probs=23.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|+|+++ |+.|.+- ..++++|.++||+|+.++-.
T Consensus 2 ~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILIL--GPTGAIG--RHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHHTCCEEEEECC
T ss_pred CcEEEEE--CCCchHH--HHHHHHHHhCCCcEEEEECC
Confidence 4566655 4455553 46789999999999987654
No 291
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=27.63 E-value=65 Score=28.14 Aligned_cols=34 Identities=9% Similarity=0.089 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+-|+++++.++.| =-.++|+.|+++|++|.+..-
T Consensus 10 ~GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 3589999987775 347899999999999988765
No 292
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.56 E-value=84 Score=26.02 Aligned_cols=37 Identities=11% Similarity=0.122 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+..++++..|..|+-.-+..+++.|+++|+.|..+-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3557777778888888899999999999998887754
No 293
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=27.48 E-value=37 Score=25.77 Aligned_cols=30 Identities=17% Similarity=0.091 Sum_probs=19.7
Q ss_pred CCeeEEEecCCc--hhHHHHHH---HcCCceEEEe
Q 040486 114 EPIACLITDATW--YFTQAVAE---SLKLSRIVLR 143 (460)
Q Consensus 114 ~kpD~VI~D~~~--~~~~~~A~---~lgiP~v~~~ 143 (460)
.+||+||.|... ..|..+++ ..++|.+.++
T Consensus 52 ~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 579999999865 23344444 3578877654
No 294
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=27.45 E-value=46 Score=30.97 Aligned_cols=35 Identities=11% Similarity=0.236 Sum_probs=27.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++..+|+++-.|-. -+.+|..|+++|++|+++-..
T Consensus 24 ~~~~dV~IVGaG~a-----Gl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 24 LSDKNVAIIGGGPV-----GLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CTTCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEECS
T ss_pred cCCCCEEEECCCHH-----HHHHHHHHHHCCCCEEEEeCC
Confidence 44568998876643 478899999999999999654
No 295
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=27.44 E-value=58 Score=28.37 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.|+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 15 ~~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 15 MKKLVVITGASSG---IGEAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CCCEEEEESTTSH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 4578888866543 3458899999999999988653
No 296
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=27.40 E-value=38 Score=31.32 Aligned_cols=40 Identities=5% Similarity=0.050 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHI----NPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~----~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|.+|||+++..|..+-- .....++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 45789999987755443 34458889998999999988653
No 297
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=27.32 E-value=1.2e+02 Score=27.49 Aligned_cols=72 Identities=11% Similarity=0.139 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHH
Q 040486 287 NETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLE 366 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~e 366 (460)
..+....+-+++.....+.||.+.++.. -. ++.+++....+-+++.. ||=.+-..+++-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~lD~~~i~~~PK~--~~GySDiTaL~~ 121 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYN-----------SN--------GLLKYLDYDLIRENPKF--FCGYSDITALNN 121 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------GG--------GGGGGCCHHHHHTSCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcccccc-----------HH--------HHHhhcChhHHHhCCeE--EEEecchHHHHH
Confidence 4566677888998888899998887641 11 55666666666566666 887777778877
Q ss_pred HHh--hCCceecccc
Q 040486 367 SIC--EGVPMICQPC 379 (460)
Q Consensus 367 al~--~GvP~v~~P~ 379 (460)
+++ .|++.+.=|.
T Consensus 122 al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 122 AIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHhhCCcEEEccc
Confidence 776 4776666554
No 298
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=27.29 E-value=74 Score=27.94 Aligned_cols=34 Identities=15% Similarity=0.106 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 10 ~~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 10 EGKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 3578888876654 356899999999999988754
No 299
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=27.11 E-value=58 Score=30.40 Aligned_cols=35 Identities=14% Similarity=0.077 Sum_probs=27.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++++||+++..+.. .+.+++++.+.|++|.++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 46789999987754 366999999999999999653
No 300
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=26.90 E-value=1.4e+02 Score=23.57 Aligned_cols=37 Identities=3% Similarity=0.069 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|||+++..+..-. .-+....+.|.++|++|.++++.
T Consensus 2 ~~ki~il~~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~ 38 (168)
T 3l18_A 2 SMKVLFLSADGFED-LELIYPLHRIKEEGHEVYVASFQ 38 (168)
T ss_dssp CCEEEEECCTTBCH-HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEEeCCCccH-HHHHHHHHHHHHCCCEEEEEECC
Confidence 58999998775533 44556678888999999999885
No 301
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=26.85 E-value=74 Score=27.80 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=25.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 10 ~~k~~lVTGas~G---IG~a~a~~la~~G~~V~~~~r 43 (277)
T 3tsc_A 10 EGRVAFITGAARG---QGRAHAVRMAAEGADIIAVDI 43 (277)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCccH---HHHHHHHHHHHcCCEEEEEec
Confidence 3577888866543 246889999999999998754
No 302
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=26.81 E-value=1.4e+02 Score=22.66 Aligned_cols=48 Identities=8% Similarity=-0.002 Sum_probs=30.6
Q ss_pred hCCceeccccccchhhhHHHHhhhhc-ceeeeCCccCHHHHHHHHHHHhcc
Q 040486 370 EGVPMICQPCFGDQMVNARYVSDVWK-VGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
..+|+|++--..|..... ...+ .| +--.+.+.++.++|..+|+.++..
T Consensus 75 ~~~~ii~~s~~~~~~~~~-~~~~-~g~~~~~l~KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAM-EAVN-EGQVFRFLNKPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHHH-HHHH-HTCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHH-HHHH-cCCeeEEEcCCCCHHHHHHHHHHHHHH
Confidence 456776654444443333 3334 26 544455568999999999999986
No 303
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=26.73 E-value=50 Score=28.92 Aligned_cols=31 Identities=23% Similarity=0.242 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||+|+-.|..| ..+|+.|.++||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 688888766555 3578889999999988744
No 304
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=26.66 E-value=42 Score=27.83 Aligned_cols=36 Identities=6% Similarity=0.002 Sum_probs=21.9
Q ss_pred CcEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 14 GRRLILFP-LPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 14 ~~~vl~~~-~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
||||+++. +|-.+.-.-.-.+++.+.+.|++|+++-
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~d 37 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHE 37 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEE
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEE
Confidence 47887664 4443322234456677777888888774
No 305
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=26.41 E-value=80 Score=27.56 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 29 ~~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 29 EGASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TTEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3578888876654 346899999999999988754
No 306
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=26.14 E-value=91 Score=25.83 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQ-LANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~-La~~L~~~Gh~Vt~~~~ 50 (460)
++|||+++-....|+..-+.. +++.|.+.|++|.++.-
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 468998776555777665554 46667778999988854
No 307
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=26.13 E-value=45 Score=31.95 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|||.++-.|..| .++|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 899999766554 57899999999999988654
No 308
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=26.13 E-value=85 Score=28.41 Aligned_cols=38 Identities=13% Similarity=0.111 Sum_probs=25.0
Q ss_pred HHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEecc
Q 040486 101 LAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 101 l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~~~ 145 (460)
++++.+ .+||+||..........--+..|||++.+...
T Consensus 109 ~E~i~a-------l~PDLIi~~~~~~~~~~~L~~~gipvv~~~~~ 146 (335)
T 4hn9_A 109 TEACVA-------ATPDVVFLPMKLKKTADTLESLGIKAVVVNPE 146 (335)
T ss_dssp HHHHHH-------TCCSEEEEEGGGHHHHHHHHHTTCCEEEECCC
T ss_pred HHHHHh-------cCCCEEEEeCcchhHHHHHHHcCCCEEEEcCC
Confidence 455555 47999998754322233345679999998654
No 309
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=26.12 E-value=48 Score=29.31 Aligned_cols=32 Identities=6% Similarity=0.163 Sum_probs=25.1
Q ss_pred CcEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPL-PLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~-~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+|||+|+-. |..| ..+|+.|.++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 479999976 6665 4578889999999997643
No 310
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=26.09 E-value=82 Score=25.69 Aligned_cols=37 Identities=16% Similarity=0.316 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccCHHHHHH-HHHHHHh-CCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQ-LANILYS-KGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~-La~~L~~-~Gh~Vt~~~~ 50 (460)
||||+++-....|+..-+.. +++.|.+ +|++|.++.-
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l 39 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRV 39 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEEC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEc
Confidence 47888776556787666554 4666666 8999988755
No 311
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=26.06 E-value=30 Score=26.82 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=35.8
Q ss_pred hCCceeccccccchhhhHHHHhhhhc-ceeeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Q 040486 370 EGVPMICQPCFGDQMVNARYVSDVWK-VGLHLERKLERGEVERTIRRVMTEAEGQEIRVRIMILKEKL 436 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G-~g~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~ 436 (460)
..+|+|++--..+.. ......+ .| +--.+.+.++.+.|..+|+.++.. ..+++..+++.+.+
T Consensus 78 ~~~~ii~ls~~~~~~-~~~~~~~-~g~~~~~l~kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~ 140 (154)
T 2rjn_A 78 PDIERVVISGYADAQ-ATIDAVN-RGKISRFLLKPWEDEDVFKVVEKGLQL---AFLREENLRLQEET 140 (154)
T ss_dssp TTSEEEEEECGGGHH-HHHHHHH-TTCCSEEEESSCCHHHHHHHHHHHHHH---HHHHHHTTSCCC--
T ss_pred CCCcEEEEecCCCHH-HHHHHHh-ccchheeeeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
Confidence 367877765444433 3333333 25 544555568999999999999876 44544443333333
No 312
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=25.89 E-value=81 Score=29.28 Aligned_cols=34 Identities=18% Similarity=0.339 Sum_probs=27.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.|+|+++-.|. .-+..|..|.++||+|+++-..
T Consensus 2 ~~~~v~iiG~G~-----~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 2 KSKKILIVGAGF-----SGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCCEEEEECCSH-----HHHHHHHHHHTTTCEEEEEESS
T ss_pred CcCCEEEECcCH-----HHHHHHHHHHHCCCcEEEEEec
Confidence 357899887653 4578899999999999999764
No 313
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=25.83 E-value=41 Score=30.76 Aligned_cols=39 Identities=8% Similarity=-0.003 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGH----INPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH----~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++|||+++..|..+- +.....++++|.+.||+|+.+...
T Consensus 2 ~~~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~i~~~ 44 (346)
T 3se7_A 2 SHMKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGIT 44 (346)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEEEEEC
Confidence 578999988654432 456778889998999999998754
No 314
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=25.80 E-value=70 Score=27.16 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 466777765543 346889999999999988765
No 315
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=25.65 E-value=3.4e+02 Score=23.76 Aligned_cols=172 Identities=10% Similarity=-0.003 Sum_probs=0.0
Q ss_pred cccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhh------------
Q 040486 263 SISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLET------------ 330 (460)
Q Consensus 263 l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~------------ 330 (460)
+.-|++- .++.++.|+.|..+ ...+..|.+.|+++.+.-... ...+.+.+.+.
T Consensus 5 lpl~~~l-~~k~VLVVGgG~va-------~rka~~Ll~~Ga~VtViap~~-------~~~l~~~~~~l~~~~~~~~~~~~ 69 (274)
T 1kyq_A 5 LQLAHQL-KDKRILLIGGGEVG-------LTRLYKLMPTGCKLTLVSPDL-------HKSIIPKFGKFIQNKDQPDYRED 69 (274)
T ss_dssp EEEEECC-TTCEEEEEEESHHH-------HHHHHHHGGGTCEEEEEEEEE-------CTTHHHHHCGGGC----------
T ss_pred eeEEEEc-CCCEEEEECCcHHH-------HHHHHHHHhCCCEEEEEcCCC-------CcchhHHHHHHHhccccccccch
Q ss_pred -----------cCCCC-ccccccChhhhhc------cCCCcccccccCchhHHHHHhh--------CCceeccccccchh
Q 040486 331 -----------LDGRG-HMVKWAPQQEVLA------HPATGGFWTHCGWNSTLESICE--------GVPMICQPCFGDQM 384 (460)
Q Consensus 331 -----------~~~~~-~v~~~vp~~~~l~------~~~~~~~I~HgG~gs~~eal~~--------GvP~v~~P~~~DQ~ 384 (460)
..+++ .+..---....|. .+++ +|.--|-..+.+.++. |+|+-+ .|.+
T Consensus 70 ~~~~~~~~~~~~~g~i~~~i~~~~~~~dL~~l~~~~~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNv----vd~p 143 (274)
T 1kyq_A 70 AKRFINPNWDPTKNEIYEYIRSDFKDEYLDLENENDAWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNV----ADKP 143 (274)
T ss_dssp -CEEECTTCCTTSCCCSEEECSSCCGGGGCCSSTTCCEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEE----TTCG
T ss_pred hhcccccccccccCCeeEEEcCCCCHHHHhhcccCCCeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEE----CCCc
Q ss_pred hhHH-----HHhhhhc-ceeeeCC----ccCHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHhcCCC---hHH
Q 040486 385 VNAR-----YVSDVWK-VGLHLER----KLERGEVERTIRRVM---TEAEGQEIRVRIMILKEKLNLCLIQGGS---SYQ 448 (460)
Q Consensus 385 ~na~-----~v~~~~G-~g~~~~~----~~~~~~l~~~i~~ll---~~~~~~~~~~~a~~~~~~~~~~~~~~g~---~~~ 448 (460)
..+. .+.+. + +-+.+.. ..-+..|++.|..++ .+.+...+-+.+.++++++++...+... -..
T Consensus 144 el~~f~~Pa~~~~g-~~l~IaIST~Gksp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~~~~~~~~rR~~ 222 (274)
T 1kyq_A 144 DLCDFYFGANLEIG-DRLQILISTNGLSPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLLAPDDKDVKYRMD 222 (274)
T ss_dssp GGBSEECCEEEEET-TTEEEEEEESSSCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHSCSGGGHHHHHH
T ss_pred ccCeeEeeeEEEeC-CCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhCCCcchHHHHHH
Q ss_pred HHHHHHHH
Q 040486 449 SLESLISY 456 (460)
Q Consensus 449 ~~~~~~~~ 456 (460)
-+..++++
T Consensus 223 w~~~i~~~ 230 (274)
T 1kyq_A 223 WARRCTDL 230 (274)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
No 316
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=25.57 E-value=39 Score=32.75 Aligned_cols=34 Identities=18% Similarity=0.305 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+.+|+|.|+-.|..| ..+|+.|+++||+|++...
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 356899999877666 4679999999999998854
No 317
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=25.54 E-value=70 Score=27.51 Aligned_cols=36 Identities=8% Similarity=0.032 Sum_probs=24.2
Q ss_pred HHHHhcccccccCCCeeEEEecCCch--hHHHHHHHcCCceEEEe
Q 040486 101 LAKLLSNVEEEEKEPIACLITDATWY--FTQAVAESLKLSRIVLR 143 (460)
Q Consensus 101 l~~l~~~~~~~~~~kpD~VI~D~~~~--~~~~~A~~lgiP~v~~~ 143 (460)
++++.+ .+||+||...... ....--+..|+|++.+.
T Consensus 52 ~E~i~~-------l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 52 AEGILA-------MKPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp HHHHHT-------TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHc-------cCCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 455555 4799999887542 22333456789999874
No 318
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=25.50 E-value=31 Score=33.37 Aligned_cols=32 Identities=16% Similarity=0.170 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+||+++-.|-- -|.-|..|+++|++|+++-.
T Consensus 1 Mk~VvVIGaG~~-----GL~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 1 MKPTTVIGAGFG-----GLALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCCEEEECCHHH-----HHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEECCcHH-----HHHHHHHHHHCCCcEEEEcc
Confidence 467777755432 37778899999999999844
No 319
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=25.50 E-value=1e+02 Score=26.84 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+++++.++. - =-..+|+.|+++|++|+++.-
T Consensus 23 k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGATS-G--IGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCSS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 6777775543 2 246789999999999998764
No 320
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=25.36 E-value=75 Score=30.99 Aligned_cols=39 Identities=13% Similarity=0.228 Sum_probs=31.8
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILFPLP---LQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~~~~---~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+||..|++.| +.|--.-..+|++.|..+|+.||..=-++
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dp 43 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDP 43 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCc
Confidence 4799999887 44666778999999999999999985543
No 321
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=25.22 E-value=46 Score=28.84 Aligned_cols=33 Identities=6% Similarity=0.038 Sum_probs=24.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
++|||+|+-.|..|. .+++.|.++||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMAS-----AIIKGLKQTPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHTTSSCEEEEECS
T ss_pred CccEEEEECCCHHHH-----HHHHHHHhCCCeEEEECC
Confidence 358999997766653 568889999999887644
No 322
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=25.17 E-value=58 Score=29.29 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+.|+|+++ |+.|.+ -..|++.|.++||+|+.+.-
T Consensus 19 ~~~~vlVT--GasG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 19 SHMRILIT--GGAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TCCEEEEE--TTTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred CCCEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 35776665 344444 35789999999999998875
No 323
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=25.15 E-value=31 Score=30.82 Aligned_cols=38 Identities=16% Similarity=0.075 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQG----HINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~G----H~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+|||+++..|... -......++++|.++||+|..+...
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLN 44 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECS
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 6899999865332 2455678899999999999998764
No 324
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=25.03 E-value=1e+02 Score=26.75 Aligned_cols=33 Identities=18% Similarity=0.125 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 10 ~k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 10 GKTALVTGSTAG---IGKAIATSLVAEGANVLINGR 42 (267)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467888866543 246789999999999988754
No 325
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=25.01 E-value=81 Score=27.12 Aligned_cols=33 Identities=9% Similarity=-0.021 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 567778766543 356899999999999988765
No 326
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=24.93 E-value=1.3e+02 Score=24.93 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++||+++..++.- ..-+....+.|..+|++|+++++.
T Consensus 9 ~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 9 SKRILVPVAHGSE-EMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4689888776654 455666678899999999999985
No 327
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=24.92 E-value=70 Score=28.11 Aligned_cols=33 Identities=18% Similarity=0.148 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 477888866553 346899999999999988754
No 328
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=24.90 E-value=81 Score=28.59 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=32.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
.+|++.+.+..|+-+-.-.++..|..-|.+|++++|+.
T Consensus 169 l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~ 206 (324)
T 1js1_X 169 VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEG 206 (324)
T ss_dssp EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTT
T ss_pred EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCcc
Confidence 67888888888987778888888888899999999963
No 329
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=24.90 E-value=31 Score=29.95 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKG----FSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~G----h~Vt~~~~ 50 (460)
|++|||.|+-.|..|.. +|+.|.++| |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~~-----~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSA-----LAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHHH-----HHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHHH-----HHHHHHHCCCCCCCeEEEEeC
Confidence 35689999987766643 678888899 89998754
No 330
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=24.84 E-value=1.2e+02 Score=27.96 Aligned_cols=33 Identities=6% Similarity=0.024 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+||+++..+ .....++++|.+.|++|.++.+..
T Consensus 2 ~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~~ 34 (380)
T 3ax6_A 2 KKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPTP 34 (380)
T ss_dssp CEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 578888754 245678899999999999988753
No 331
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=24.83 E-value=61 Score=28.85 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=23.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+.++|+ ++ |+.|-+ -..|++.|.++||+|+.+.-.
T Consensus 10 ~~~~~vl-VT-GatG~i--G~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 10 HGSMRAL-IT-GVAGFV--GKYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp ---CEEE-EE-TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred cCcceEE-EE-CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 3445554 44 344544 356889999999999998654
No 332
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=24.83 E-value=79 Score=27.82 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=29.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|+|..-|+-|-..-...||..|+++|++|.++-.+
T Consensus 4 vIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 345555667888999999999999999999998654
No 333
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=24.76 E-value=93 Score=24.60 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQ-LANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~-La~~L~~~Gh~Vt~~~~ 50 (460)
|||+++-+..+|+..-+.. +++.|.+.|++|.++.-
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~ 37 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDL 37 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEET
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 6777666556788877654 68888889999988754
No 334
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=24.75 E-value=37 Score=31.33 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=25.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
||+|+-.|..| ..+|..|.++||+|+++..
T Consensus 17 kI~iIG~G~mG-----~~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 17 KAVVFGSGAFG-----TALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp EEEEECCSHHH-----HHHHHHHTTTEEEEEEECS
T ss_pred eEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 99999887766 4678999999999999865
No 335
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=24.74 E-value=46 Score=26.96 Aligned_cols=34 Identities=12% Similarity=0.078 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSK-GFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~-Gh~Vt~~~~~ 51 (460)
..+||+++-.|..| ..+|+.|.++ ||+|+++...
T Consensus 38 ~~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 35789988554333 5678999999 9999998664
No 336
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=24.73 E-value=75 Score=28.06 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.|+++++.++.| =-..+|+.|+++|++|.+++-.
T Consensus 11 ~~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4678888876643 3468899999999999888653
No 337
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=24.68 E-value=3.6e+02 Score=23.76 Aligned_cols=109 Identities=7% Similarity=0.064 Sum_probs=0.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCC-CCCCCCCCCeeEEecCCCCCCcccccccHHHHHHHHH
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFN-SPNPSNYPHFTFCSIEDSLSETEASTADLVALLSLLN 90 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (460)
..++||+++.++.-+-+.-++.-.+.=.-...-+.+++.... ........|+.+..+|..............+.++..
T Consensus 86 ~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~~- 164 (287)
T 3nrb_A 86 TDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDIPFHYLPVTPATKAAQESQIKNIVTQS- 164 (287)
T ss_dssp TCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTSCEEECCCCGGGHHHHHHHHHHHHHHH-
T ss_pred CCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCCCEEEEeccCcchhhHHHHHHHHHHHh-
Q ss_pred HhcchhHHHHHHHHhcccccccCCCeeEEEecCCc-hhHHHHHHHcCCceEEEecc
Q 040486 91 VQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATW-YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 91 ~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~-~~~~~~A~~lgiP~v~~~~~ 145 (460)
+||+||.-.+. .....+-+.+.-.++=+.++
T Consensus 165 ------------------------~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 165 ------------------------QADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ------------------------TCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ------------------------CCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
No 338
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=24.59 E-value=58 Score=29.44 Aligned_cols=35 Identities=9% Similarity=0.169 Sum_probs=23.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++|+|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 18 ~~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 18 GSHMILVT--GSAGRVG--RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ---CEEEE--TTTSHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEE--CCCChHH--HHHHHHHHhCCCEEEEEeCC
Confidence 35666655 3445443 46789999999999998654
No 339
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=24.59 E-value=95 Score=26.18 Aligned_cols=35 Identities=9% Similarity=0.083 Sum_probs=0.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGF--SITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh--~Vt~~~~~ 51 (460)
+|||+|+.+|+. .-+.++.++|.+.+| +|..+.+.
T Consensus 1 m~rI~vl~SG~g---~~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 1 MLKIGVLVSGRG---SNLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp CEEEEEEECSCC---HHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CCEEEEEEeCCc---HHHHHHHHHHHhCCCCCeEEEEEeC
No 340
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=24.59 E-value=79 Score=27.73 Aligned_cols=40 Identities=18% Similarity=0.251 Sum_probs=31.9
Q ss_pred CCcEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 13 KGRRLILFP--LPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 13 ~~~~vl~~~--~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
.++|+++++ -|+-|-..-...||..|++.|.+|.++-.+.
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 346666664 3577888889999999999999999997653
No 341
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=24.53 E-value=92 Score=26.55 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.++..
T Consensus 4 ~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 4 TKSALVTGASRG---IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp SCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788865542 346789999999999988755
No 342
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=24.52 E-value=2.1e+02 Score=21.01 Aligned_cols=38 Identities=11% Similarity=0.121 Sum_probs=30.2
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINP-MLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p-~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.++||+++|..+.|.-.- .-.+-+.+.+.|.++.+-..
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 467899999999999874 67777888889998765443
No 343
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=24.52 E-value=2e+02 Score=22.43 Aligned_cols=90 Identities=9% Similarity=-0.055 Sum_probs=53.9
Q ss_pred cEEEEEcCCCcc---CHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCCCCCCcccccccHHHHHHHHHH
Q 040486 15 RRLILFPLPLQG---HINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIEDSLSETEASTADLVALLSLLNV 91 (460)
Q Consensus 15 ~~vl~~~~~~~G---H~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (460)
..++++++|+.| .-.-+..++++|.+.+.++.+++.....+... .++.+..+- + .
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~--~~v~~~~~~---~--------~--------- 78 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPDTLG--LNTRLYKWI---P--------Q--------- 78 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCTTCC--TTEEEESSC---C--------H---------
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcccCC--CcEEEecCC---C--------H---------
Confidence 456778888886 44556778889988888888887643211111 244443220 0 0
Q ss_pred hcchhHHHHHHHHhcccccccCCCeeEEEecCCchhHHHHHHHcCCceEEEe
Q 040486 92 QCVVPFRNCLAKLLSNVEEEEKEPIACLITDATWYFTQAVAESLKLSRIVLR 143 (460)
Q Consensus 92 ~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~~~~~~~A~~lgiP~v~~~ 143 (460)
.+++. . ...|++|+... ..+..=|-.+|+|.+.+-
T Consensus 79 ------~~~l~-~---------~~ad~~I~~~G-~~t~~Ea~~~G~P~i~~p 113 (170)
T 2o6l_A 79 ------NDLLG-H---------PKTRAFITHGG-ANGIYEAIYHGIPMVGIP 113 (170)
T ss_dssp ------HHHHT-S---------TTEEEEEECCC-HHHHHHHHHHTCCEEECC
T ss_pred ------HHHhc-C---------CCcCEEEEcCC-ccHHHHHHHcCCCEEecc
Confidence 01111 1 25899999753 345566777899999964
No 344
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=24.44 E-value=2.9e+02 Score=22.53 Aligned_cols=118 Identities=16% Similarity=0.167 Sum_probs=68.0
Q ss_pred CCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHH
Q 040486 286 INETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTL 365 (460)
Q Consensus 286 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~ 365 (460)
..++.+.++++..+..+.++|++..+.. ..||.-+...+.--++= +|- ..+ +-+|..++.
T Consensus 52 R~p~~l~~~~~~a~~~g~~ViIa~AG~a-------a~LpgvvA~~t~~PVIg---VP~-------~~~---~l~G~dsLl 111 (183)
T 1o4v_A 52 RTPDRMFEYAKNAEERGIEVIIAGAGGA-------AHLPGMVASITHLPVIG---VPV-------KTS---TLNGLDSLF 111 (183)
T ss_dssp TCHHHHHHHHHHTTTTTCCEEEEEEESS-------CCHHHHHHHHCSSCEEE---EEE-------CCT---TTTTHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEecCcc-------cccHHHHHhccCCCEEE---eeC-------CCC---CCCcHHHHH
Confidence 3566667777777777888888877652 44666443222211110 110 110 457888888
Q ss_pred HHHhh--CCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Q 040486 366 ESICE--GVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAEGQEIRVRIMILKEKLN 437 (460)
Q Consensus 366 eal~~--GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~ 437 (460)
..+.. |+|+-+ +..|-..||..+.-. .+ .++...|.+.+++--.+ +++.+.+-.++++
T Consensus 112 SivqmP~GvpVat--V~Id~~~nAa~lAaq-----Il--a~~d~~l~~kL~~~r~~-----~~~~v~~~~~~l~ 171 (183)
T 1o4v_A 112 SIVQMPGGVPVAT--VAINNAKNAGILAAS-----IL--GIKYPEIARKVKEYKER-----MKREVLEKAQRLE 171 (183)
T ss_dssp HHHTCCTTCCCEE--CCTTCHHHHHHHHHH-----HH--HTTCHHHHHHHHHHHHH-----HHHHHHHHHHHHH
T ss_pred HHhcCCCCCeeEE--EecCCchHHHHHHHH-----HH--hcCCHHHHHHHHHHHHH-----HHHHHHHHHHHHH
Confidence 88888 999433 345788898877654 11 35666777777655432 3444444444444
No 345
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=24.43 E-value=58 Score=29.31 Aligned_cols=34 Identities=12% Similarity=0.128 Sum_probs=26.7
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQ--GHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~--GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+|++++.++- |+ .+.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEec
Confidence 48988886543 33 478999999999999998653
No 346
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=24.36 E-value=1.2e+02 Score=25.00 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=29.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+..++++..|..|...-+..+++.|+++|+.|..+-.
T Consensus 27 ~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 27 PAPVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp SEEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 3456666667778888899999999999999887754
No 347
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=24.22 E-value=1e+02 Score=25.31 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=27.4
Q ss_pred cEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRL-ILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~v-l~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|| +|+..+...+-.....+++.|++.|++|.+++-.
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G 144 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIG 144 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEES
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeC
Confidence 454 4555555556777889999999999999987654
No 348
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=24.15 E-value=87 Score=28.67 Aligned_cols=33 Identities=6% Similarity=-0.125 Sum_probs=25.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|+||+++..+ .....+++++.+.|++|.++.+.
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~ 33 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDK 33 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCC
Confidence 3578888644 44678899999999999998764
No 349
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=23.93 E-value=87 Score=26.95 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 6 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 6 EKVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788866543 347889999999999988764
No 350
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=23.81 E-value=79 Score=31.35 Aligned_cols=39 Identities=8% Similarity=0.054 Sum_probs=36.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+.+|++.+.++-.|-....-++..|..+|++|.+++..
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~ 135 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVM 135 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCC
Confidence 468999999999999999999999999999999999775
No 351
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=23.70 E-value=72 Score=28.69 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+|+|++. |+.|-+- ..|++.|.++||+|+.+.-
T Consensus 5 ~~~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVT--GGAGYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEe--cCCcHHH--HHHHHHHHHCCCcEEEEec
Confidence 4566554 3444333 5789999999999998754
No 352
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=23.68 E-value=1.4e+02 Score=24.58 Aligned_cols=37 Identities=11% Similarity=0.125 Sum_probs=28.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+||+++..++. ...-+....+.|.++|++|+++++..
T Consensus 3 ~kV~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (205)
T 2ab0_A 3 ASALVCLAPGS-EETEAVTTIDLLVRGGIKVTTASVAS 39 (205)
T ss_dssp CEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred cEEEEEEcCCC-cHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 58888877665 34556667788999999999998854
No 353
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=23.68 E-value=19 Score=34.81 Aligned_cols=56 Identities=14% Similarity=0.130 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEEecCC--CCCCc
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFCSIED--SLSET 75 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~ 75 (460)
+.+-+|++. .|=.-++.+|+.|.+.|.++. +|.-....... .|+....+.+ ++|+.
T Consensus 23 ~i~raLISV---~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e-~GI~v~~V~kvTgfPEi 80 (534)
T 4ehi_A 23 NAMRALLSV---SDKEGIVEFGKELENLGFEIL--STGGTFKLLKE-NGIKVIEVSDFTKSPEL 80 (534)
T ss_dssp TCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHH-TTCCCEECBCCC-----
T ss_pred CCcEEEEEE---cccccHHHHHHHHHHCCCEEE--EccHHHHHHHH-CCCceeehhhccCCchh
Confidence 434344443 344558899999999999875 34322222222 4677666653 45543
No 354
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=23.63 E-value=63 Score=28.24 Aligned_cols=33 Identities=9% Similarity=0.094 Sum_probs=26.2
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQ--GHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~--GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+|++++.++- |+ .+.+|+.|+.+|++|+++..
T Consensus 86 ~~vlVlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 120 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQ---GISCGRHLANHDVQVILFLP 120 (259)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEe
Confidence 48988886543 33 47899999999999999865
No 355
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.60 E-value=83 Score=26.57 Aligned_cols=33 Identities=6% Similarity=0.039 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|+++++.++.| =-..+++.|+++|++|+++.-.
T Consensus 4 k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 4 GKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp EEEEEETTTSH---HHHHHHHHHHHTTEEEEEEESS
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEecC
Confidence 56667754432 3468999999999999988653
No 356
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=23.58 E-value=92 Score=27.56 Aligned_cols=39 Identities=21% Similarity=0.324 Sum_probs=29.4
Q ss_pred CCCcEEEEEcCCCccCHHH--HHHHHHHHHhCC-CeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINP--MLQLANILYSKG-FSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p--~l~La~~L~~~G-h~Vt~~~~~ 51 (460)
.++.|||+++ +..+|-.+ .-.|++.|.+.| .+|++...+
T Consensus 2 ~~~~kvLiv~-G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLIT-GQNNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEE-SCCSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEc-CCCCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4679999995 45588644 357788888888 999999764
No 357
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=23.51 E-value=59 Score=28.19 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=26.3
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQ--GHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~--GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+|++++.++- |+ -+.+|+.|+++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGD---Glv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGD---GLVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCeEEEEEc
Confidence 48988886543 33 47899999999999999865
No 358
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=23.45 E-value=30 Score=32.06 Aligned_cols=32 Identities=9% Similarity=-0.001 Sum_probs=25.0
Q ss_pred hhhhccCCCcccccccCchhHHHHHhh----CCceecc
Q 040486 344 QEVLAHPATGGFWTHCGWNSTLESICE----GVPMICQ 377 (460)
Q Consensus 344 ~~~l~~~~~~~~I~HgG~gs~~eal~~----GvP~v~~ 377 (460)
.++-..+|+ +|+=||=||+..|... ++|++.+
T Consensus 103 ~~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGi 138 (365)
T 3pfn_A 103 DDISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAF 138 (365)
T ss_dssp CCCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEE
T ss_pred hhcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEE
Confidence 345567888 9999999999999763 5787764
No 359
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=23.42 E-value=62 Score=29.63 Aligned_cols=38 Identities=11% Similarity=0.325 Sum_probs=25.4
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 040486 10 HQKKGRRLILFPLPLQGHINPMLQLANILYSK-GFSITIIHTN 51 (460)
Q Consensus 10 ~~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~-Gh~Vt~~~~~ 51 (460)
..+.+|+|+++ |+.|.+- ..|+++|.++ ||+|+.+.-.
T Consensus 20 ~~m~~~~vlVt--GatG~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 20 GSMKAKKVLIL--GVNGFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp ---CCCEEEEE--SCSSHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred cccCCCEEEEE--CCCChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 34556777765 3445444 4678999998 9999998764
No 360
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=23.36 E-value=1.5e+02 Score=25.08 Aligned_cols=38 Identities=5% Similarity=-0.045 Sum_probs=28.7
Q ss_pred CcEEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILFPL-----PLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~~~-----~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
++||+++.. ++. ...=+......|.++|++|+++++..
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 568998877 433 44556667788999999999999853
No 361
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=23.35 E-value=82 Score=28.49 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|++|+|+++- +.|.+- ..|+++|.++||+|+.++-.
T Consensus 8 M~~~~IlVtG--atG~iG--~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAG--ATGFIG--QFVATASLDAHRPTYILARP 43 (346)
T ss_dssp ---CCEEEEC--TTSHHH--HHHHHHHHHTTCCEEEEECS
T ss_pred CCCCeEEEEC--CCcHHH--HHHHHHHHHCCCCEEEEECC
Confidence 4567777663 445443 46789999999999988764
No 362
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=23.32 E-value=71 Score=27.24 Aligned_cols=68 Identities=10% Similarity=0.115 Sum_probs=0.0
Q ss_pred cCCCcccccccCchhHHHHHhhCCceecccc-----------------------ccchhhhHHHHhhhhcceeeeCCccC
Q 040486 349 HPATGGFWTHCGWNSTLESICEGVPMICQPC-----------------------FGDQMVNARYVSDVWKVGLHLERKLE 405 (460)
Q Consensus 349 ~~~~~~~I~HgG~gs~~eal~~GvP~v~~P~-----------------------~~DQ~~na~~v~~~~G~g~~~~~~~~ 405 (460)
.+++ +|+.||-....... .++|+|-++. +......+..+.+.+|+-+....-.+
T Consensus 63 ~~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~ 139 (225)
T 2pju_A 63 RCDA--IIAAGSNGAYLKSR-LSVPVILIKPSGYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYIT 139 (225)
T ss_dssp CCSE--EEEEHHHHHHHHTT-CSSCEEEECCCHHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESS
T ss_pred CCeE--EEeCChHHHHHHhh-CCCCEEEecCCHHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCC
Q ss_pred HHHHHHHHHHHhcc
Q 040486 406 RGEVERTIRRVMTE 419 (460)
Q Consensus 406 ~~~l~~~i~~ll~~ 419 (460)
.+++...|+++..+
T Consensus 140 ~ee~~~~i~~l~~~ 153 (225)
T 2pju_A 140 EEDARGQINELKAN 153 (225)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHC
No 363
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=23.24 E-value=83 Score=27.02 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=23.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+++++.++.| + -..+|+.|+++|++|+++.-
T Consensus 3 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 3 KVALVTGAGQG-I--GKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56777755432 2 46789999999999988764
No 364
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=23.19 E-value=2e+02 Score=24.25 Aligned_cols=118 Identities=12% Similarity=0.081 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHHH
Q 040486 289 TEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLESI 368 (460)
Q Consensus 289 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~eal 368 (460)
++-..+++.+++.+.+++...+... -+|+.+.+..+... +==|+++ .=...|...+..|+
T Consensus 76 ~~d~~~~~~l~~~~~Dlivlagy~~--------iL~~~~l~~~~~~~----------iNiHpSL--LP~yrG~~pi~~Ai 135 (215)
T 3da8_A 76 AWDVAITAATAAHEPDLVVSAGFMR--------ILGPQFLSRFYGRT----------LNTHPAL--LPAFPGTHGVADAL 135 (215)
T ss_dssp HHHHHHHHHHHTTCCSEEEEEECCS--------CCCHHHHHHHTTTE----------EEEESSC--TTSSCSTTHHHHHH
T ss_pred hhhHHHHHHHHhhCCCEEEEcCchh--------hCCHHHHhhccCCe----------EEeCccc--ccCCCCchHHHHHH
Confidence 3445578888888888888877643 37777754433211 2224444 44456889999999
Q ss_pred hhCCceeccccc--cchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHHH
Q 040486 369 CEGVPMICQPCF--GDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAEGQEIRVRIMILK 433 (460)
Q Consensus 369 ~~GvP~v~~P~~--~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~ 433 (460)
.+|.....+-++ .+..+-+..+.+. -+.+...-|.++|.+.+.++-. .-|.+..+.+.
T Consensus 136 ~~G~~~tGvTvh~v~~~lD~G~Ii~Q~---~v~I~~~dt~~~L~~rl~~~~~----~ll~~~l~~~~ 195 (215)
T 3da8_A 136 AYGVKVTGATVHLVDAGTDTGPILAQQ---PVPVLDGDDEETLHERIKVTER----RLLVAAVAALA 195 (215)
T ss_dssp HHTCSEEEEEEEECCSSSSCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHHH
T ss_pred HcCCCeEEEEEEEEcCCCCCCCEEEEE---EeecCCCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 999988766553 3444444444432 1222335688888887765522 35555555543
No 365
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.12 E-value=58 Score=29.76 Aligned_cols=29 Identities=10% Similarity=0.051 Sum_probs=20.0
Q ss_pred CeeEEEecCCch-hHHHHHHHcCCceEEEe
Q 040486 115 PIACLITDATWY-FTQAVAESLKLSRIVLR 143 (460)
Q Consensus 115 kpD~VI~D~~~~-~~~~~A~~lgiP~v~~~ 143 (460)
+||+||...... -.....+.+|||++.+.
T Consensus 96 ~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~ 125 (346)
T 2etv_A 96 QPDVVFITYVDRXTAXDIQEXTGIPVVVLS 125 (346)
T ss_dssp CCSEEEEESCCHHHHHHHHHHHTSCEEEEC
T ss_pred CCCEEEEeCCccchHHHHHHhcCCcEEEEe
Confidence 799999875432 12234577899999874
No 366
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=23.12 E-value=83 Score=27.80 Aligned_cols=31 Identities=16% Similarity=0.374 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||+|+-.|..|. .+++.|.++||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 7999998777764 468889999999987744
No 367
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=22.89 E-value=96 Score=25.11 Aligned_cols=44 Identities=11% Similarity=-0.059 Sum_probs=24.8
Q ss_pred ccccCCCCCcEEEEEcCCCccCHHHHHHHHHHHHh-CC--CeEEEEe
Q 040486 6 DSHIHQKKGRRLILFPLPLQGHINPMLQLANILYS-KG--FSITIIH 49 (460)
Q Consensus 6 ~~~~~~~~~~~vl~~~~~~~GH~~p~l~La~~L~~-~G--h~Vt~~~ 49 (460)
...+...+++||||++.|-..----.=.+.+.+.+ +| .++.+.+
T Consensus 10 ~~~~~~~~M~kVLFVCtGNiCRSpmAE~i~r~~~~~~gl~~~~~v~S 56 (173)
T 4etm_A 10 GQQMGRGSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADS 56 (173)
T ss_dssp CC--CCSSCEEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEE
T ss_pred CCcCCCCCccEEEEEeCCcchhhHHHHHHHHHHHHHcCCCCceEEec
Confidence 34445567899999998755433333455666654 44 3455543
No 368
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=22.87 E-value=1.2e+02 Score=25.45 Aligned_cols=36 Identities=8% Similarity=0.086 Sum_probs=27.1
Q ss_pred cEEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGH--INPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH--~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..++++..|..|+ ..-+..+++.|.++|+.|..+-.
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 83 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDF 83 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEcc
Confidence 4555665666655 66688999999999999887754
No 369
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=22.85 E-value=1e+02 Score=26.57 Aligned_cols=34 Identities=21% Similarity=0.132 Sum_probs=25.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+.|+++++.++.| =-..+|+.|+++|++|.+...
T Consensus 3 ~~k~vlVTGas~g---IG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 3 QNKCALVTGSSRG---VGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEecCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 3577888865542 246789999999999998633
No 370
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=22.74 E-value=55 Score=29.02 Aligned_cols=33 Identities=12% Similarity=-0.042 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 15 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 15 KFDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred ccCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 3588888766555 67889999999999999764
No 371
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=22.73 E-value=80 Score=28.53 Aligned_cols=35 Identities=11% Similarity=0.118 Sum_probs=25.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+|+|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 24 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEE--CCCcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 35677665 3455543 57899999999999998753
No 372
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=22.70 E-value=49 Score=29.11 Aligned_cols=31 Identities=16% Similarity=0.197 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+|||+|+-.|..|. .+|+.|.+ ||+|+++..
T Consensus 1 M~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~ 31 (289)
T 2cvz_A 1 MEKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNR 31 (289)
T ss_dssp -CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeC
Confidence 37899998777775 46888889 999988754
No 373
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=22.64 E-value=1.5e+02 Score=25.34 Aligned_cols=32 Identities=16% Similarity=0.102 Sum_probs=24.0
Q ss_pred CCeeEEEecCCc-------hhHHHHHHHcCCceEEEecc
Q 040486 114 EPIACLITDATW-------YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 114 ~kpD~VI~D~~~-------~~~~~~A~~lgiP~v~~~~~ 145 (460)
.+||+|++|... --|..+.-.+++|+|.+.=+
T Consensus 106 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 144 (237)
T 3goc_A 106 CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVAKN 144 (237)
T ss_dssp SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEESS
T ss_pred CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeeecc
Confidence 579999999854 23455677789999997644
No 374
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=22.57 E-value=82 Score=28.41 Aligned_cols=35 Identities=20% Similarity=0.404 Sum_probs=23.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.++|+|+++ |+.|-+ -..|++.|.++||+|+.+.-
T Consensus 25 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILIT--GGAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEE--cCccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 345777665 344544 35778999999999998865
No 375
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=22.50 E-value=1.2e+02 Score=27.64 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=32.8
Q ss_pred CCcEEEEE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 13 KGRRLILF-PLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 13 ~~~~vl~~-~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
.+++|+|+ .-|+-|-..-...||..|+++|++|.++..+.
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 64 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP 64 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 34555555 44677999999999999999999999999875
No 376
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=22.47 E-value=85 Score=27.16 Aligned_cols=33 Identities=15% Similarity=0.087 Sum_probs=26.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|.+++|.++.| =-.++|+.|+++|.+|.++.-.
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67888877765 3468999999999999988653
No 377
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=22.45 E-value=1.8e+02 Score=21.48 Aligned_cols=49 Identities=8% Similarity=0.109 Sum_probs=33.6
Q ss_pred hCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhcc
Q 040486 370 EGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
..+|+|++--..+.........+ .|+--.+.+.++.++|..+|+++++.
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~-~g~~~~l~kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQP-LAVSTWLEKPIDENLLILSLHRAIDN 127 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTT-TCCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhh-cCCCEEEeCCCCHHHHHHHHHHHHHh
Confidence 36788776555444433324455 37666666678999999999999976
No 378
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=22.42 E-value=98 Score=26.61 Aligned_cols=38 Identities=21% Similarity=0.205 Sum_probs=30.1
Q ss_pred cEEEEE--cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILF--PLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~--~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+|++.+ +-|+-|-..-...||..|+++|++|.++-.+.
T Consensus 2 ~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 2 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 344433 45677889999999999999999999997653
No 379
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=22.36 E-value=61 Score=28.87 Aligned_cols=32 Identities=13% Similarity=0.224 Sum_probs=22.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
+|+|+++ |+.|.+- ..|++.|.++||+|+++.
T Consensus 3 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIA--GHRGMVG--SAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp CEEEEEE--TTTSHHH--HHHHHHHTTCTTEEEECC
T ss_pred CCEEEEE--CCCcHHH--HHHHHHHHhCCCeEEEEe
Confidence 4677665 4455553 457899999999988764
No 380
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=22.30 E-value=95 Score=27.35 Aligned_cols=32 Identities=13% Similarity=0.098 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
.|+++++.++.| =-..+|+.|+++|++|+++.
T Consensus 9 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 467888866643 35689999999999999887
No 381
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=22.29 E-value=1.2e+02 Score=25.83 Aligned_cols=36 Identities=11% Similarity=0.180 Sum_probs=22.7
Q ss_pred cEEEEE-cCCCccCHHHH--HHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILF-PLPLQGHINPM--LQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~-~~~~~GH~~p~--l~La~~L~~~Gh~Vt~~~~ 50 (460)
|||+++ .++-.+-.+-. -.+++.|.++||+|.++--
T Consensus 2 mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 2 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 788766 44444433332 2356667778999999854
No 382
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=22.22 E-value=62 Score=24.11 Aligned_cols=17 Identities=12% Similarity=0.266 Sum_probs=11.1
Q ss_pred HHHHHHHhCCCeEEEEe
Q 040486 33 QLANILYSKGFSITIIH 49 (460)
Q Consensus 33 ~La~~L~~~Gh~Vt~~~ 49 (460)
..+.++++.|.+|.+++
T Consensus 70 ~~i~~~~~~G~~V~~l~ 86 (117)
T 3hh1_A 70 RQVIELLEEGSDVALVT 86 (117)
T ss_dssp HHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHCCCeEEEEe
Confidence 33334446788888888
No 383
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=22.20 E-value=41 Score=29.21 Aligned_cols=31 Identities=16% Similarity=0.152 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKG-FSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~G-h~Vt~~~~ 50 (460)
|||+|+-.|..|. .+|+.|.++| |+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMAA-----AVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHHCSCEEEEECS
T ss_pred CEEEEECchHHHH-----HHHHHHHHCCCCeEEEECC
Confidence 6888887665553 5688888999 99988754
No 384
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=22.20 E-value=1.5e+02 Score=24.92 Aligned_cols=35 Identities=20% Similarity=0.178 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKG-FSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~G-h~Vt~~~~~ 51 (460)
+|+.++++. +.|-+ -..|++.|.++| |+|+.+.-.
T Consensus 22 ~mk~vlVtG-atG~i--G~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 22 HMKNVLILG-AGGQI--ARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CCEEEEEET-TTSHH--HHHHHHHHTTCTTEEEEEEESS
T ss_pred cccEEEEEe-CCcHH--HHHHHHHHHhCCCceEEEEEcC
Confidence 356566653 34433 357899999999 999988754
No 385
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=22.13 E-value=89 Score=26.83 Aligned_cols=36 Identities=17% Similarity=0.033 Sum_probs=23.4
Q ss_pred HHHHhcccccccCCCeeEEEecCCc--hhHHHHHHHcCCceEEEe
Q 040486 101 LAKLLSNVEEEEKEPIACLITDATW--YFTQAVAESLKLSRIVLR 143 (460)
Q Consensus 101 l~~l~~~~~~~~~~kpD~VI~D~~~--~~~~~~A~~lgiP~v~~~ 143 (460)
++++.+ .+||+||..... .....--+..|||++.+.
T Consensus 52 ~E~i~~-------l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (256)
T 2r7a_A 52 SEGILS-------LRPDSVITWQDAGPQIVLDQLRAQKVNVVTLP 89 (256)
T ss_dssp HHHHHT-------TCCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHc-------cCCCEEEEcCCCCCHHHHHHHHHcCCcEEEec
Confidence 455555 479999987543 222333456899998864
No 386
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=22.11 E-value=77 Score=26.99 Aligned_cols=40 Identities=8% Similarity=0.039 Sum_probs=30.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHH------HHHHhCC-CeEEEEeCCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLA------NILYSKG-FSITIIHTNF 52 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La------~~L~~~G-h~Vt~~~~~~ 52 (460)
..++.++++.|+.+.++.++.-+ ++|.+.| .+|++.+...
T Consensus 26 ~~~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~ 72 (224)
T 2jzc_A 26 IEEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRN 72 (224)
T ss_dssp CCSCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSS
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCC
Confidence 34677888888887789887766 8898888 6888777653
No 387
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=22.09 E-value=52 Score=29.58 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGF--SITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh--~Vt~~~~~ 51 (460)
.+|||+++-.|+.|-. +|..|+.+|| +|+++...
T Consensus 6 ~~mkI~IiGaG~vG~~-----~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 6 KPTKLAVIGAGAVGST-----LAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp -CCEEEEECCSHHHHH-----HHHHHHHTTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHH-----HHHHHHhCCCCCEEEEEeCC
Confidence 3589999865544432 6778899999 99998654
No 388
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=22.06 E-value=56 Score=30.60 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
|+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~~ 32 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFERL 32 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeCC
Confidence 577777665444 78899999999999999553
No 389
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=22.01 E-value=1.4e+02 Score=25.14 Aligned_cols=38 Identities=16% Similarity=0.216 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCcc----CHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQG----HINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~G----H~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+.+|.+++....+ +..-...|++.|+++|+.|..-+.
T Consensus 8 ~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg 49 (216)
T 1ydh_A 8 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGG 49 (216)
T ss_dssp SCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 34469988755544 345678888899999998765544
No 390
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=21.98 E-value=67 Score=28.37 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=23.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+++|+++ |+.|.+- ..++++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLI--GATGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEE--STTSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEE--cCCcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 4666665 3444443 46789999999999887653
No 391
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=21.95 E-value=1.1e+02 Score=26.59 Aligned_cols=33 Identities=21% Similarity=0.089 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 4 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 4 DKVILITGASGG---IGEGIARELGVAGAKILLGAR 36 (264)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCccH---HHHHHHHHHHHCCCEEEEEEC
Confidence 477888866543 246889999999999988764
No 392
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=21.87 E-value=99 Score=26.92 Aligned_cols=35 Identities=9% Similarity=-0.013 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++|+++++.++. -+ -..+|+.|+++|++|+.+.-.
T Consensus 4 ~~k~vlVTGas~-gI--G~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 4 SAKVWLVTGASS-GF--GRAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCCEEEETTTTS-HH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEECCCC-hH--HHHHHHHHHHCCCEEEEEeCC
Confidence 357778886553 23 457899999999999887653
No 393
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=21.83 E-value=80 Score=27.19 Aligned_cols=39 Identities=18% Similarity=0.157 Sum_probs=30.5
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILFP--LPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~~--~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+||++.+. -|+-|-..-...||..|+++|++|.++-.+.
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45655553 4566888889999999999999999997653
No 394
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=21.79 E-value=95 Score=26.93 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 21 ~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 53 (267)
T 1vl8_A 21 GRVALVTGGSRG---LGFGIAQGLAEAGCSVVVASR 53 (267)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 577777765432 346889999999999988764
No 395
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=21.78 E-value=57 Score=30.01 Aligned_cols=39 Identities=8% Similarity=0.055 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQG-H---INPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~G-H---~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|++.||+++..|..+ | +.....++++|.+.||+|+.+..
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~i 43 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGI 43 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEEE
Confidence 567899888655333 4 34456789999999999998743
No 396
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=21.72 E-value=85 Score=27.41 Aligned_cols=32 Identities=13% Similarity=0.153 Sum_probs=24.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+++++.++.| + -..+|+.|+++|++|+++.-
T Consensus 22 k~vlVTGas~g-I--G~aia~~La~~G~~V~~~~r 53 (272)
T 2nwq_A 22 STLFITGATSG-F--GEACARRFAEAGWSLVLTGR 53 (272)
T ss_dssp CEEEESSTTTS-S--HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 67888865543 3 35789999999999998765
No 397
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=21.72 E-value=3.1e+02 Score=24.26 Aligned_cols=111 Identities=9% Similarity=0.103 Sum_probs=0.0
Q ss_pred CCCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC-CCCCCCCCCCCeeEEecCCCCCCcccccccHHHHHHH
Q 040486 10 HQKKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN-FNSPNPSNYPHFTFCSIEDSLSETEASTADLVALLSL 88 (460)
Q Consensus 10 ~~~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (460)
....++||+++.++.-+-+.-++.-.+.=.-.+.-+.+++.. ..........|+.+..+|..............+.++.
T Consensus 85 ~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gIp~~~~~~~~~~r~~~~~~~~~~l~~ 164 (288)
T 3obi_A 85 DRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDIPFYHFPVNKDTRRQQEAAITALIAQ 164 (288)
T ss_dssp ETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTCCEEECCCCTTTHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCCCEEEeCCCcccHHHHHHHHHHHHHh
Q ss_pred HHHhcchhHHHHHHHHhcccccccCCCeeEEEecCCc-hhHHHHHHHcCCceEEEecc
Q 040486 89 LNVQCVVPFRNCLAKLLSNVEEEEKEPIACLITDATW-YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 89 ~~~~~~~~l~~~l~~l~~~~~~~~~~kpD~VI~D~~~-~~~~~~A~~lgiP~v~~~~~ 145 (460)
. +||+||.-.+. .....+-+.+.-.++=+.++
T Consensus 165 ~-------------------------~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 165 T-------------------------HTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp H-------------------------TCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred c-------------------------CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
No 398
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=21.68 E-value=82 Score=27.23 Aligned_cols=35 Identities=9% Similarity=0.046 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
-|+++++..+.+. -=-.++|+.|+++|++|.+..-
T Consensus 6 gK~alVTGaa~~~-GIG~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 6 NKTYVIMGIANKR-SIAFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp TCEEEEECCCSTT-CHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCCc-hHHHHHHHHHHHCCCEEEEEEC
Confidence 5778888643211 1247899999999999998765
No 399
>3aek_B Light-independent protochlorophyllide reductase S; iron/sulfur cluster, oxidoreductase, bacteriochlorophyll biosynthesis; HET: PMR; 2.30A {Rhodobacter capsulatus} PDB: 3aeq_B* 3aer_B 3aes_B* 3aeu_B 3aet_B
Probab=21.67 E-value=3.7e+02 Score=26.13 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=24.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHH-HhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANIL-YSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L-~~~Gh~Vt~~~~ 50 (460)
..||+++. +-.-.+.+++.| .+-|.+|..+++
T Consensus 280 GKrv~i~g-----d~~~~~~la~~L~~ElGm~vv~~gt 312 (525)
T 3aek_B 280 GKRVFIFG-----DGTHVIAAARIAAKEVGFEVVGMGC 312 (525)
T ss_dssp TCEEEECS-----SHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred CCEEEEEc-----CchHHHHHHHHHHHHcCCeeEEEec
Confidence 46888763 334578899999 689999987766
No 400
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=21.64 E-value=1.5e+02 Score=24.99 Aligned_cols=38 Identities=26% Similarity=0.279 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGH----INPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH----~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+.+|.+++....+. ..-...|++.|+++|+.|+.-..
T Consensus 12 ~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg 53 (215)
T 2a33_A 12 KFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGG 53 (215)
T ss_dssp SCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCC
Confidence 345699996655543 23567888999999988876443
No 401
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=21.62 E-value=74 Score=27.56 Aligned_cols=34 Identities=24% Similarity=0.108 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|+++++.++.| =-..+|++|+++|++|.++.-.
T Consensus 27 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 27 SAPILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367788866543 3468899999999999988653
No 402
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=21.60 E-value=90 Score=28.68 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=33.2
Q ss_pred CcEEEEE-cCCCccCHHHHHHHHHHHH--hCCCeEEEEeCCC
Q 040486 14 GRRLILF-PLPLQGHINPMLQLANILY--SKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~-~~~~~GH~~p~l~La~~L~--~~Gh~Vt~~~~~~ 52 (460)
.++|+|+ .-|+-|-..-...||..|+ ++|++|.++..+.
T Consensus 17 ~~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 17 THKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp SCCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 3566666 4668899999999999999 9999999999875
No 403
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=21.60 E-value=1.9e+02 Score=23.50 Aligned_cols=38 Identities=8% Similarity=0.117 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
++||+++..++... .-+....+.|.++|++|+++++..
T Consensus 23 ~~kV~ill~~g~~~-~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFED-SEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBCT-HHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEEECCCCCH-HHHHHHHHHHHHCCCEEEEEECCC
Confidence 57899998876543 345667788889999999998864
No 404
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.57 E-value=1.1e+02 Score=27.53 Aligned_cols=38 Identities=13% Similarity=0.040 Sum_probs=31.9
Q ss_pred cEEEEE-cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 15 RRLILF-PLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 15 ~~vl~~-~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
++|+|+ .-|+-|-..-...||..|+++|++|.++..+.
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 455555 45678999999999999999999999999875
No 405
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=21.48 E-value=95 Score=26.95 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56777765543 356789999999999998865
No 406
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=21.37 E-value=1e+02 Score=26.51 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 29 GQVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 367777765543 356789999999999988765
No 407
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=21.36 E-value=1e+02 Score=26.44 Aligned_cols=34 Identities=15% Similarity=0.024 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYS-KGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~-~Gh~Vt~~~~ 50 (460)
++|.++++.++ |-+ -..+++.|++ +|++|+++.-
T Consensus 3 ~~k~vlITGas-ggI--G~~~a~~L~~~~g~~V~~~~r 37 (276)
T 1wma_A 3 GIHVALVTGGN-KGI--GLAIVRDLCRLFSGDVVLTAR 37 (276)
T ss_dssp CCCEEEESSCS-SHH--HHHHHHHHHHHSSSEEEEEES
T ss_pred CCCEEEEeCCC-cHH--HHHHHHHHHHhcCCeEEEEeC
Confidence 35667777544 333 4578999999 9999998865
No 408
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=21.35 E-value=93 Score=26.77 Aligned_cols=33 Identities=12% Similarity=0.034 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|++|+++|++|.++.-
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777766543 346899999999999988764
No 409
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=21.32 E-value=80 Score=30.34 Aligned_cols=32 Identities=6% Similarity=0.133 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSK--GFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~--Gh~Vt~~~~ 50 (460)
+|||.++-.|..| ..+|..|+++ ||+|+++..
T Consensus 5 ~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 5 IKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred ccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 5899999776666 4678888888 899998854
No 410
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=21.29 E-value=97 Score=27.02 Aligned_cols=34 Identities=21% Similarity=0.076 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|+++++.++.| =-..+|+.|+++|++|.++.-.
T Consensus 10 ~k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r~ 43 (281)
T 3s55_A 10 GKTALITGGARG---MGRSHAVALAEAGADIAICDRC 43 (281)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeCC
Confidence 467777766643 3468899999999999888653
No 411
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=21.27 E-value=99 Score=26.70 Aligned_cols=39 Identities=18% Similarity=0.102 Sum_probs=30.2
Q ss_pred CcEEEEE--cCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILF--PLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~--~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
+++++.+ .-|+-|=..-...||..|+++|++|.++-.+.
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 57 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADF 57 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4555544 34567888889999999999999999986653
No 412
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=21.17 E-value=2.3e+02 Score=25.41 Aligned_cols=74 Identities=15% Similarity=0.220 Sum_probs=53.0
Q ss_pred CCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhc-cCCCcccccccCchhH
Q 040486 286 INETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLA-HPATGGFWTHCGWNST 364 (460)
Q Consensus 286 ~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~-~~~~~~~I~HgG~gs~ 364 (460)
...+....+.+++.....+.||.+.++.. -. ++.+++....+-+ ++.. ||=++-..++
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyg-----------a~--------rlLp~LD~~~i~~a~PK~--~iGySDiTaL 122 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYG-----------CG--------QLLPGLDWGRLQAASPRP--LIGFSDISVL 122 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSC-----------GG--------GGTTTCCHHHHHHSCCCC--EEECGGGHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcC-----------HH--------HHhhccchhhhhccCCCE--EEEEchhHHH
Confidence 34566777889998888899999887641 11 5666776666655 6766 8888888888
Q ss_pred HHHHhh-CCceeccccc
Q 040486 365 LESICE-GVPMICQPCF 380 (460)
Q Consensus 365 ~eal~~-GvP~v~~P~~ 380 (460)
+-+++. |++.+.=|..
T Consensus 123 ~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 123 LSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHHTTCCEEECCCG
T ss_pred HHHHHHcCCcEEECHhh
Confidence 888873 7777666643
No 413
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=21.15 E-value=31 Score=31.62 Aligned_cols=35 Identities=11% Similarity=0.110 Sum_probs=26.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCC-------CeEEEEeCC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKG-------FSITIIHTN 51 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~G-------h~Vt~~~~~ 51 (460)
|.+|||+|+-.|..|. .+|..|+++| |+|+++...
T Consensus 6 m~~mkI~iIG~G~mG~-----~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGS-----AIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp -CCEEEEEECCSHHHH-----HHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred cCCCeEEEECCCHHHH-----HHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 4568999998776664 5678888888 999998653
No 414
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=21.15 E-value=1e+02 Score=26.86 Aligned_cols=33 Identities=9% Similarity=-0.028 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++. - =-..+|+.|+++|++|.++.-
T Consensus 32 gk~~lVTGas~-G--IG~aia~~la~~G~~V~~~~r 64 (276)
T 3r1i_A 32 GKRALITGAST-G--IGKKVALAYAEAGAQVAVAAR 64 (276)
T ss_dssp TCEEEEESTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC-H--HHHHHHHHHHHCCCEEEEEeC
Confidence 46777776553 2 246889999999999998865
No 415
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=21.08 E-value=84 Score=24.14 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHH-HHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQ-LANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~-La~~L~~~Gh~Vt~~~~ 50 (460)
|||+++-....|+..-+.. |++.|.++|++|.++.-
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~ 37 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDA 37 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEeh
Confidence 6777665545677655443 46666678999988754
No 416
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=21.06 E-value=1.3e+02 Score=22.96 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=23.0
Q ss_pred CCcEEEEEcCCCccCHH--------HHHHHHHHHHhCCCeEE
Q 040486 13 KGRRLILFPLPLQGHIN--------PMLQLANILYSKGFSIT 46 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~--------p~l~La~~L~~~Gh~Vt 46 (460)
..||.++++.|-.|... .+-..|..|.++||-+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 45777888888777732 34455666889999654
No 417
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=21.04 E-value=46 Score=29.85 Aligned_cols=34 Identities=6% Similarity=-0.086 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.+++|+++-.|..| +..|..|+++|++|+++-..
T Consensus 21 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~vie~~ 54 (338)
T 3itj_A 21 VHNKVTIIGSGPAA-----HTAAIYLARAEIKPILYEGM 54 (338)
T ss_dssp CEEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECCS
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEecC
Confidence 45788888765433 77899999999999999663
No 418
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=20.99 E-value=1e+02 Score=28.33 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILY-SKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~-~~Gh~Vt~~~~ 50 (460)
.|+|+++ |+.|.+ -..|++.|. ++||+|+.+.-
T Consensus 2 ~m~vlVT--GatG~i--G~~l~~~L~~~~g~~V~~~~r 35 (397)
T 1gy8_A 2 HMRVLVC--GGAGYI--GSHFVRALLRDTNHSVVIVDS 35 (397)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHHCCCEEEEEEC
T ss_pred CCEEEEE--CCCCHH--HHHHHHHHHHhCCCEEEEEec
Confidence 4676655 444544 356889999 99999998864
No 419
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=20.98 E-value=89 Score=27.86 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
||+|+++ |+.|-+ -..|++.|.++||+|+.+.-
T Consensus 1 M~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 1 MNSILIC--GGAGYI--GSHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp -CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEE--CCCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 3566555 334433 35788999999999998864
No 420
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=20.97 E-value=86 Score=28.11 Aligned_cols=34 Identities=24% Similarity=0.453 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
.|+|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 3 ~~~vlVt--GatG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALIT--GIRGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEE--CCCChHH--HHHHHHHHHCCCEEEEEECC
Confidence 4666655 3445443 56889999999999988653
No 421
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=20.95 E-value=1.4e+02 Score=25.76 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=23.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+++++.++. - =-..+++.|+++|++|+++.-
T Consensus 8 k~vlVTGas~-g--IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTGAAQ-G--IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEETTTS-H--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-c--HHHHHHHHHHHCCCEEEEEEC
Confidence 5667775443 2 246789999999999998764
No 422
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=20.94 E-value=3.3e+02 Score=21.94 Aligned_cols=114 Identities=11% Similarity=-0.003 Sum_probs=62.3
Q ss_pred CeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccc---cccChhhhhcc
Q 040486 273 KSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMV---KWAPQQEVLAH 349 (460)
Q Consensus 273 ~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~---~~vp~~~~l~~ 349 (460)
+.+++.-.|+.... ....+++.|.+.++++-...+.....- . -|..++. ..+.++.. .|+++-.+-..
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~~f---i--~~~~l~~-l~~~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGRKF---I--NGEILKQ-FCDNYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGGGG---S--CHHHHHH-HCSCEECTTTCTTCCHHHHHHT
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHHHH---h--hHHHHHH-hcCCEEecCCCCccccccccch
Confidence 45666666776653 244567778777877766655443111 1 1233322 22222211 34666666666
Q ss_pred CCCcccccccCchhHH-------------HHHhhCCceecccccc----ch---hhhHHHHhhhhcce
Q 040486 350 PATGGFWTHCGWNSTL-------------ESICEGVPMICQPCFG----DQ---MVNARYVSDVWKVG 397 (460)
Q Consensus 350 ~~~~~~I~HgG~gs~~-------------eal~~GvP~v~~P~~~----DQ---~~na~~v~~~~G~g 397 (460)
+|+ .+|-=+-+||+. -+++.++|++++|-.. +. ..|-.++.+ +|+=
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~-~G~~ 142 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKD-YGVS 142 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHH-TTCE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHH-CCCE
Confidence 665 355556666543 3467789999999432 21 345566666 4653
No 423
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.94 E-value=1.1e+02 Score=21.95 Aligned_cols=47 Identities=4% Similarity=0.010 Sum_probs=33.0
Q ss_pred hCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhcc
Q 040486 370 EGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
..+|++++ ..+......+..+ .|+--.+.+.++.++|..+|++++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~-~g~~~~l~kp~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLK-AHADEYVAKPVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHST-TCCSEEEESSCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHH-hCcchheeCCCCHHHHHHHHHHHHcC
Confidence 46888888 3344445555555 37755565568999999999998764
No 424
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=20.93 E-value=1.1e+02 Score=29.05 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=27.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+.+||+|+-.|..| +++|+.|+++||+|+..-.
T Consensus 7 ~~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 7 FENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 346899999886654 3469999999999999855
No 425
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=20.92 E-value=1.2e+02 Score=25.99 Aligned_cols=32 Identities=9% Similarity=-0.007 Sum_probs=21.1
Q ss_pred CCeeEEEecCCc-hhHHHHHHHcCCceEEEecc
Q 040486 114 EPIACLITDATW-YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 114 ~kpD~VI~D~~~-~~~~~~A~~lgiP~v~~~~~ 145 (460)
.+||+||..... ......-+..|||++.+...
T Consensus 59 l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~ 91 (260)
T 2q8p_A 59 LKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD 91 (260)
T ss_dssp TCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCS
T ss_pred cCCCEEEecCccCHHHHHHHHHcCCcEEEecCC
Confidence 479999986532 22233456679999987653
No 426
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=20.92 E-value=99 Score=26.86 Aligned_cols=34 Identities=6% Similarity=0.022 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+-|+++++.++.| =-.++|+.|+++|.+|.++.-
T Consensus 6 ~gKvalVTGas~G---IG~aiA~~la~~Ga~Vv~~~~ 39 (254)
T 4fn4_A 6 KNKVVIVTGAGSG---IGRAIAKKFALNDSIVVAVEL 39 (254)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHcCCEEEEEEC
Confidence 3588999987775 357889999999999988754
No 427
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=20.91 E-value=38 Score=31.80 Aligned_cols=31 Identities=13% Similarity=0.208 Sum_probs=25.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEe
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYS-KGFSITIIH 49 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~-~Gh~Vt~~~ 49 (460)
+|||+++-.|..|. .+|..|++ +||+|+++.
T Consensus 2 ~mkI~ViGaG~~G~-----~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-----TLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHH-----HHHHHHHhCCCCEEEEEe
Confidence 47999998877665 56788888 599999987
No 428
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=20.86 E-value=1e+02 Score=26.97 Aligned_cols=33 Identities=12% Similarity=0.118 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 477888866543 346889999999999988764
No 429
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=20.82 E-value=2.6e+02 Score=20.59 Aligned_cols=47 Identities=13% Similarity=0.160 Sum_probs=32.1
Q ss_pred CCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhcc
Q 040486 371 GVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 371 GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
.+|++++--..+.. ...+..+ .|+--.+.+.++.++|..+|++++..
T Consensus 78 ~~pii~~t~~~~~~-~~~~~~~-~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 78 TLPILMLTAQGDIS-AKIAGFE-AGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp TCCEEEEECTTCHH-HHHHHHH-HTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CccEEEEecCCCHH-HHHHHHh-cCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 57777765544433 3344444 37766666679999999999999876
No 430
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=20.79 E-value=1.4e+02 Score=25.13 Aligned_cols=36 Identities=14% Similarity=0.167 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGH--INPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH--~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
...+++.+|..|+ ..-+..+++.|.++|++|..+--
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D~ 64 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADM 64 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEecC
Confidence 4456666677777 67778899999999999877643
No 431
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=20.76 E-value=1.1e+02 Score=27.68 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=24.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
++|+|+++ |+.|-+ -..|+++|.++||+|+.+.-
T Consensus 26 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 26 QPKVWLIT--GVAGFI--GSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp SCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCeEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 35666655 344544 35688999999999998865
No 432
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=20.75 E-value=2e+02 Score=20.95 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=27.8
Q ss_pred EEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCC
Q 040486 275 VIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPG 312 (460)
Q Consensus 275 ~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~ 312 (460)
.||+.|.| .++.+.+++..++..|.+++..+...
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdq 36 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQ 36 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCc
Confidence 47777765 67899999999999999998887654
No 433
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=20.71 E-value=90 Score=26.79 Aligned_cols=38 Identities=26% Similarity=0.319 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHI--NPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~--~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
++.-++++..|..+|- .-+..+|+.|+++|+.|..+-.
T Consensus 54 ~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~ 93 (259)
T 4ao6_A 54 SSDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDG 93 (259)
T ss_dssp CCSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECC
T ss_pred CCCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeecc
Confidence 3456777888877773 3477899999999999887754
No 434
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=20.69 E-value=1.4e+02 Score=28.34 Aligned_cols=42 Identities=14% Similarity=0.354 Sum_probs=34.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSP 55 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~ 55 (460)
+..|+++..++.|-..-+..||..|+++|+.|.+++.+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 455667767788999999999999999999999998875543
No 435
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=20.69 E-value=67 Score=30.53 Aligned_cols=33 Identities=6% Similarity=0.064 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
..|||.++-.|..| +++|..|++ ||+|+.+...
T Consensus 35 ~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 35 EFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 35899999776655 356778887 9999998653
No 436
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=20.69 E-value=1.2e+02 Score=25.64 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++ |-+ -..+++.|+++|++|+++.-
T Consensus 2 ~k~vlItGas-ggi--G~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 2 SRVAIVTGAS-SGN--GLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp CCEEEEETTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEeC
Confidence 3566666544 323 45789999999999998865
No 437
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=20.63 E-value=1e+02 Score=27.63 Aligned_cols=32 Identities=19% Similarity=0.279 Sum_probs=22.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+|++. |+.|.+- ..|+++|.++||+|+.+..
T Consensus 1 m~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVT--GGSGYIG--SHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEec
Confidence 565554 4555443 4688999999999998753
No 438
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=20.59 E-value=1.3e+02 Score=25.63 Aligned_cols=42 Identities=17% Similarity=0.137 Sum_probs=29.7
Q ss_pred cccccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEE
Q 040486 263 SISWLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFL 306 (460)
Q Consensus 263 l~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i 306 (460)
+.+|+. ..+.+++|..|+...........+.++++++++.+.
T Consensus 24 l~~~~~--~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~ 65 (229)
T 1fy2_A 24 IANQLN--GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVT 65 (229)
T ss_dssp HHHHHT--TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEE
T ss_pred HHHHhc--CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Confidence 455664 356799999887544445667778999999887643
No 439
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=20.59 E-value=1.8e+02 Score=26.00 Aligned_cols=118 Identities=14% Similarity=0.116 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHHH
Q 040486 288 ETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLES 367 (460)
Q Consensus 288 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~ea 367 (460)
.+.-..+++.+++.+.++++..+... -||+.+.+..+.+.+ ==|+++ .=...|.+.+..|
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym~--------IL~~~~l~~~~~~~I----------NiHpSl--LP~frG~~p~~~A 226 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYMQ--------ILPPQLCREYAHQVI----------NIHHSF--LPSFVGAKPYHQA 226 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCCS--------CCCTTHHHHTTTCEE----------EEESSC--TTSSCSSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhhh--------hcCHHHHhhhhCCeE----------EeCccc--ccCCCCccHHHHH
Confidence 44455688888888888888877643 377877554443222 123443 3345689999999
Q ss_pred HhhCCceeccccc--cchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhccchHHHHHHHHHHH
Q 040486 368 ICEGVPMICQPCF--GDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTEAEGQEIRVRIMIL 432 (460)
Q Consensus 368 l~~GvP~v~~P~~--~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~ 432 (460)
+.+|+....+-.+ .+..+-+..+.+. -+.+...-|.++|.+.+.++-. .-|.+..+.+
T Consensus 227 i~~G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~~~dt~~~L~~r~~~~e~----~~l~~av~~~ 286 (302)
T 3o1l_A 227 SLRGVKLIGATCHYVTEELDAGPIIEQD---VVRVSHRDSIENMVRFGRDVEK----MVLARGLRAH 286 (302)
T ss_dssp HHHTCSEEEEEEEECCSSTTCSCEEEEE---EEECCTTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred HHcCCCeEEEEEEEECCCCcCCCeEEEE---EEecCCCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 9999998776653 3444444444432 1222335688888888876633 3555555544
No 440
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=20.58 E-value=1.2e+02 Score=27.26 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
++|+|+++ |+.|-+ -..|++.|.++||+|+.+.-.
T Consensus 20 ~~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 20 HMKKVFIT--GICGQI--GSHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp -CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEe--CCccHH--HHHHHHHHHHCCCEEEEEECC
Confidence 45666655 333433 356789999999999998653
No 441
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=20.57 E-value=80 Score=27.70 Aligned_cols=33 Identities=24% Similarity=0.176 Sum_probs=26.3
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQ--GHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~--GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+|++++.++- |+ -+.+|+.|+++|++|+++..
T Consensus 80 ~~VlVlcG~GNNGGD---Glv~AR~L~~~G~~V~V~~~ 114 (265)
T 2o8n_A 80 PTVLVICGPGNNGGD---GLVCARHLKLFGYQPTIYYP 114 (265)
T ss_dssp CEEEEEECSSHHHHH---HHHHHHHHHHTTCEEEEECC
T ss_pred CeEEEEECCCCCHHH---HHHHHHHHHHCCCcEEEEEe
Confidence 48988886543 33 47899999999999999865
No 442
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=20.56 E-value=1.3e+02 Score=25.91 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|.++++.++ | .=-..+++.|+++|++|+++.-
T Consensus 16 ~k~vlITGas-g--giG~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 16 DKVAIITGGA-G--GIGETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp TCEEEEESTT-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-C--HHHHHHHHHHHHCCCEEEEEcC
Confidence 3556666443 3 2346789999999999998854
No 443
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=20.53 E-value=1.4e+02 Score=27.38 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=24.5
Q ss_pred eEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcC
Q 040486 274 SVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRP 311 (460)
Q Consensus 274 ~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~ 311 (460)
.++++++|+..- ...+..++++|.+.|+++.+.+..
T Consensus 6 ~il~~~~~~~Gh--v~~~~~La~~L~~~GheV~v~~~~ 41 (402)
T 3ia7_A 6 HILFANVQGHGH--VYPSLGLVSELARRGHRITYVTTP 41 (402)
T ss_dssp EEEEECCSSHHH--HHHHHHHHHHHHHTTCEEEEEECH
T ss_pred EEEEEeCCCCcc--cccHHHHHHHHHhCCCEEEEEcCH
Confidence 577777775432 233455788888889988887753
No 444
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=20.51 E-value=1.1e+02 Score=26.46 Aligned_cols=33 Identities=21% Similarity=0.187 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 29 ~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 29 GKNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467778766543 346899999999999998866
No 445
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=20.48 E-value=68 Score=30.06 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=24.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
|+|+++-.|..| +..|..|+++|++|+++-.
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 1 MRAVVVGAGLGG-----LLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 577777665444 7889999999999999954
No 446
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=20.44 E-value=1.1e+02 Score=26.41 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 20 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 20 GKRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 477888866653 346889999999999988765
No 447
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=20.41 E-value=83 Score=27.37 Aligned_cols=34 Identities=15% Similarity=0.093 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
+-|+++++.++.| =-.++|+.|+++|.+|.+..-
T Consensus 8 ~gKvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 8 TGKTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 3589999988775 356899999999999987643
No 448
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=20.40 E-value=1.1e+02 Score=26.00 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=27.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.++|+++-.| .-....++.|.+.|++||++++.
T Consensus 30 ~gk~VLVVGgG-----~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGG-----TIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCS-----HHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCC-----HHHHHHHHHHHHCCCEEEEECCC
Confidence 45788888654 45677889999999999999875
No 449
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=20.39 E-value=1e+02 Score=26.62 Aligned_cols=34 Identities=18% Similarity=0.020 Sum_probs=27.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.-|++++|.++.| =-.++|+.|+++|.+|.+..-
T Consensus 8 ~GKvalVTGas~G---IG~aiA~~la~~Ga~Vvi~~r 41 (247)
T 4hp8_A 8 EGRKALVTGANTG---LGQAIAVGLAAAGAEVVCAAR 41 (247)
T ss_dssp TTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCcCCH---HHHHHHHHHHHcCCEEEEEeC
Confidence 4689999988775 347889999999999988754
No 450
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=20.38 E-value=3.2e+02 Score=25.95 Aligned_cols=147 Identities=9% Similarity=0.005 Sum_probs=74.3
Q ss_pred ccCCCCCCeEEEEEccccccCCHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcC-CCCccccccChh
Q 040486 266 WLDKQTPKSVIYVSFGSIAAINETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLD-GRGHMVKWAPQQ 344 (460)
Q Consensus 266 ~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~-~~~~v~~~vp~~ 344 (460)
|++- .+++++.|+.|... ...+..|.+.|.++.+.-.. +.+.+.+... .++.+..---+.
T Consensus 7 ~~~l-~~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~-----------~~~~~~~l~~~~~i~~~~~~~~~ 67 (457)
T 1pjq_A 7 FCQL-RDRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT-----------FIPQFTVWANEGMLTLVEGPFDE 67 (457)
T ss_dssp EECC-BTCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS-----------CCHHHHHHHTTTSCEEEESSCCG
T ss_pred EEEC-CCCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC-----------CCHHHHHHHhcCCEEEEECCCCc
Confidence 4544 35678888877644 34556677788887665432 2123322211 222222111223
Q ss_pred hhhccCCCcccccccCchh-----HHHHHhhCCceeccccccchhhhHHHH-----hhh-hcceeeeCC--ccCHHHHHH
Q 040486 345 EVLAHPATGGFWTHCGWNS-----TLESICEGVPMICQPCFGDQMVNARYV-----SDV-WKVGLHLER--KLERGEVER 411 (460)
Q Consensus 345 ~~l~~~~~~~~I~HgG~gs-----~~eal~~GvP~v~~P~~~DQ~~na~~v-----~~~-~G~g~~~~~--~~~~~~l~~ 411 (460)
+-|..+++ +|.--|.-. ..+|-..|+|+-+ .|++..+..+ .+. +-+|+.-.. ..-...|++
T Consensus 68 ~~l~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~----~d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~ 141 (457)
T 1pjq_A 68 TLLDSCWL--AIAATDDDTVNQRVSDAAESRRIFCNV----VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLRE 141 (457)
T ss_dssp GGGTTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEE----TTCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHH
T ss_pred cccCCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEE----CCCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHH
Confidence 44556777 887777654 4455667888622 2333333222 221 123333111 222466777
Q ss_pred HHHHHhccchHHHHHHHHHHHHHHHHH
Q 040486 412 TIRRVMTEAEGQEIRVRIMILKEKLNL 438 (460)
Q Consensus 412 ~i~~ll~~~~~~~~~~~a~~~~~~~~~ 438 (460)
.|.+.+.+ +...+-+.+.++++++++
T Consensus 142 ~ie~~l~~-~~~~~~~~~~~~R~~~~~ 167 (457)
T 1pjq_A 142 KLESLLPQ-HLGQVARYAGQLRARVKK 167 (457)
T ss_dssp HHHHHSCT-THHHHHHHHHHHHHHHHH
T ss_pred HHHHhcch-hHHHHHHHHHHHHHHHHh
Confidence 77777653 113555666666666654
No 451
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=20.37 E-value=74 Score=31.33 Aligned_cols=41 Identities=17% Similarity=0.310 Sum_probs=30.5
Q ss_pred CCCCcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 11 QKKGRRLILFPLPLQ---GHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 11 ~~~~~~vl~~~~~~~---GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+..++|.+|++.|.. |--.-..+|++.|.++|++|+.+=.+
T Consensus 8 ~~~~~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~ 51 (550)
T 1vco_A 8 GPRPRKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKID 51 (550)
T ss_dssp --CCCEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEE
T ss_pred cccceeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecc
Confidence 334568888886655 44556788999999999999988664
No 452
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=20.31 E-value=1.9e+02 Score=26.12 Aligned_cols=71 Identities=8% Similarity=0.107 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHcCCCCEEEEEcCCccCCCccCCCCchhHHhhcCCCCccccccChhhhhccCCCcccccccCchhHHH
Q 040486 287 NETEFLEVAWGLANSKVPFLWVVRPGLVRGAEWIEPLPQGFLETLDGRGHMVKWAPQQEVLAHPATGGFWTHCGWNSTLE 366 (460)
Q Consensus 287 ~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~v~~~vp~~~~l~~~~~~~~I~HgG~gs~~e 366 (460)
..+....+-+++.....+.||...++.. -. ++.+++....+-+++.. ||=.+-..+++-
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-----------~~--------rlL~~LD~~~i~~~PK~--~~GySDiT~L~~ 121 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFN-----------SN--------QLLPYLDYDLISENPKI--LCGFSDITALAT 121 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSC-----------GG--------GGGGGCCHHHHHHSCCE--EEECTTHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchh-----------HH--------HHhhhcchhhhccCCeE--EEecccccHHHH
Confidence 4566677888998888899998877641 11 45566666666666655 776666666666
Q ss_pred HHh--hCCceeccc
Q 040486 367 SIC--EGVPMICQP 378 (460)
Q Consensus 367 al~--~GvP~v~~P 378 (460)
+++ .|+..+.=|
T Consensus 122 al~~~~g~~t~hGp 135 (327)
T 4h1h_A 122 AIYTQTELITYSGA 135 (327)
T ss_dssp HHHHHHCBCEEECC
T ss_pred HHHHhcCeEEEeCc
Confidence 664 344444333
No 453
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=20.30 E-value=1.3e+02 Score=25.08 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|.++++.++ |-+ -..+++.|.++|++|+++.-
T Consensus 5 ~k~vlVtGas-ggi--G~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 5 KGAVLITGAS-RGI--GEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp CCEEEESSTT-SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCC-cHH--HHHHHHHHHHCCCEEEEEEC
Confidence 3556666444 433 46789999999999998765
No 454
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=20.29 E-value=1.2e+02 Score=25.65 Aligned_cols=32 Identities=25% Similarity=0.155 Sum_probs=23.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
||.++++.++ |-+ -..+++.|+++|++|+++.
T Consensus 1 ~k~vlITGas-ggi--G~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 1 MRKALITGAS-RGI--GRAIALRLAEDGFALAIHY 32 (245)
T ss_dssp CCEEEETTTT-SHH--HHHHHHHHHTTTCEEEEEE
T ss_pred CCEEEEeCCC-chH--HHHHHHHHHHCCCEEEEEc
Confidence 3556676544 433 4578999999999999873
No 455
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=20.28 E-value=1.1e+02 Score=27.64 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTN 51 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~ 51 (460)
+.|+|+++ |+.|.+- ..|++.|.++||+|+.+.-.
T Consensus 8 ~~~~vlVt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 8 QGKRVFVT--GHTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp TTCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEE--CCCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 45676665 4555553 56789999999999988653
No 456
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=20.27 E-value=1.1e+02 Score=26.45 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.+...
T Consensus 27 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 27 GRKALVTGATGG---IGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467788866543 346789999999999988765
No 457
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=20.27 E-value=1.1e+02 Score=24.93 Aligned_cols=39 Identities=8% Similarity=-0.086 Sum_probs=22.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHH-hCCCeEEEEeC
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILY-SKGFSITIIHT 50 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~-~~Gh~Vt~~~~ 50 (460)
..+|||+|++.+-..=---.=.|.+.+. ..|.++.+.+.
T Consensus 32 ~~~mkVLFVC~GNiCRSpmAE~l~r~~~~~~g~~~~v~SA 71 (180)
T 4egs_A 32 RGSMRVLFVCTGNTCRSPMAEGIFNAKSKALGKDWEAKSA 71 (180)
T ss_dssp --CCEEEEEESSSSSHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCeEEEEEeCCCcccCHHHHHHHHHHHHhcCCceEEEEe
Confidence 4579999999886554433444555554 35666555433
No 458
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=20.26 E-value=92 Score=25.70 Aligned_cols=37 Identities=16% Similarity=0.175 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
..+.+++..|..|+..-+..+++.|.++|+.|..+-.
T Consensus 21 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 21 TDTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SSEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CCceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 3455666677778888889999999999998866533
No 459
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=20.23 E-value=2.6e+02 Score=22.47 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=32.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCeeEE
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNFNSPNPSNYPHFTFC 66 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~~~~~~~~~~g~~~~ 66 (460)
+||+++-.+... ..-+....+.|.++|++|+++++....+.... .|+.+.
T Consensus 6 kkv~ill~~g~~-~~e~~~~~~~l~~ag~~v~~~s~~~~~~v~~~-~g~~i~ 55 (190)
T 4e08_A 6 KSALVILAPGAE-EMEFIIAADVLRRAGIKVTVAGLNGGEAVKCS-RDVQIL 55 (190)
T ss_dssp CEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEESSSSSCEECT-TSCEEE
T ss_pred cEEEEEECCCch-HHHHHHHHHHHHHCCCEEEEEECCCCcceecC-CCcEEE
Confidence 578887766553 44456667889999999999998642222222 455554
No 460
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=20.22 E-value=2.5e+02 Score=20.17 Aligned_cols=47 Identities=6% Similarity=0.191 Sum_probs=32.2
Q ss_pred hCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhc
Q 040486 370 EGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMT 418 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~ 418 (460)
..+|++++--..+ .....+..+ .|+--.+.+.++.++|..+|+++++
T Consensus 75 ~~~pii~~s~~~~-~~~~~~~~~-~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGG-EEDESLALS-LGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCS-HHHHHHHHH-TTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCc-hHHHHHHHh-cChhhhccCCCCHHHHHHHHHHHhc
Confidence 3578777654443 334455555 3776666667899999999998875
No 461
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=20.21 E-value=2.3e+02 Score=23.08 Aligned_cols=38 Identities=8% Similarity=0.068 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHTNF 52 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~~~ 52 (460)
++||+++.+++.. ..-+....+.|.++|++|+++++..
T Consensus 3 ~~~v~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 3 SKRALVILAKGAE-EMETVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCEEEEEECCCCc-HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 3688888776553 3445667788999999999998753
No 462
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=20.20 E-value=1.1e+02 Score=26.49 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|.++.-
T Consensus 8 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 8 EAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 567888866653 356889999999999988764
No 463
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=20.20 E-value=1.1e+02 Score=25.01 Aligned_cols=37 Identities=8% Similarity=0.096 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCc---cCHHHHHH-HHHHHHhCC--CeEEEEeC
Q 040486 14 GRRLILFPLPLQ---GHINPMLQ-LANILYSKG--FSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~---GH~~p~l~-La~~L~~~G--h~Vt~~~~ 50 (460)
||||+++..... |+..-+.. +++.|.++| ++|.++--
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl 43 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDL 43 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEET
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 478877654433 66555554 466677766 99988754
No 464
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=20.20 E-value=1.2e+02 Score=26.87 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=25.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 040486 12 KKGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIH 49 (460)
Q Consensus 12 ~~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~ 49 (460)
++.|||+++... .......+.|.++||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 567899888542 356677899999999998764
No 465
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=20.20 E-value=1.1e+02 Score=26.37 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 4 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 4 GKVAVVTGSTSG---IGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHcCCEEEEEeC
Confidence 356777765543 346889999999999988754
No 466
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=20.20 E-value=1.1e+02 Score=26.30 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|+++++.++.| =-..+|+.|+++|++|+++.-
T Consensus 21 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 53 (253)
T 2nm0_A 21 SRSVLVTGGNRG---IGLAIARAFADAGDKVAITYR 53 (253)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777765543 346789999999999988765
No 467
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=20.19 E-value=77 Score=27.00 Aligned_cols=30 Identities=10% Similarity=0.051 Sum_probs=22.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 040486 16 RLILFPLPLQGHINPMLQLANILYSKGFSITII 48 (460)
Q Consensus 16 ~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~ 48 (460)
|+++++.++.| + -..+|+.|+++|++|+++
T Consensus 2 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 2 VIALVTHARHF-A--GPAAVEALTQDGYTVVCH 31 (244)
T ss_dssp CEEEESSTTST-T--HHHHHHHHHHTTCEEEEC
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEe
Confidence 56777755543 3 357899999999999887
No 468
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=20.13 E-value=94 Score=26.83 Aligned_cols=32 Identities=13% Similarity=-0.029 Sum_probs=23.5
Q ss_pred CCeeEEEecCCc-------hhHHHHHHHcCCceEEEecc
Q 040486 114 EPIACLITDATW-------YFTQAVAESLKLSRIVLRTN 145 (460)
Q Consensus 114 ~kpD~VI~D~~~-------~~~~~~A~~lgiP~v~~~~~ 145 (460)
.+||++++|... --|..+.-.+++|+|.+.=+
T Consensus 108 ~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVAKs 146 (246)
T 3ga2_A 108 TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKT 146 (246)
T ss_dssp SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEESS
T ss_pred CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEeeecc
Confidence 479999999754 23455667789999997544
No 469
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=20.11 E-value=1.8e+02 Score=23.15 Aligned_cols=36 Identities=14% Similarity=0.093 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccCHHHHHH--HHHHHHhCCCeEEEEeC
Q 040486 15 RRLILFPLPLQGHINPMLQ--LANILYSKGFSITIIHT 50 (460)
Q Consensus 15 ~~vl~~~~~~~GH~~p~l~--La~~L~~~Gh~Vt~~~~ 50 (460)
..++++-.|..|+...+.. +++.|.++|+.|..+-.
T Consensus 32 ~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~ 69 (210)
T 1imj_A 32 RFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDL 69 (210)
T ss_dssp SCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECC
T ss_pred CceEEEECCCCCccceeecchhHHHHHHCCCeEEEecC
Confidence 4455666677788877777 59999999999887744
No 470
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=20.10 E-value=73 Score=28.49 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=25.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 14 GRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 14 ~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.|||+|+-.|..|. .+|+.|.+.||+|+++..
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 58999998776664 578889999999988754
No 471
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=20.06 E-value=1.4e+02 Score=25.35 Aligned_cols=35 Identities=17% Similarity=0.093 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 040486 13 KGRRLILFPLPLQGHINPMLQLANILYSKGFSITIIHT 50 (460)
Q Consensus 13 ~~~~vl~~~~~~~GH~~p~l~La~~L~~~Gh~Vt~~~~ 50 (460)
.+-|.++++.++.| --..+|+.|+++|++|+++.-
T Consensus 12 ~~~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 46 (249)
T 3f9i_A 12 LTGKTSLITGASSG---IGSAIARLLHKLGSKVIISGS 46 (249)
T ss_dssp CTTCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEcC
Confidence 35666777765543 346889999999999998765
No 472
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=20.04 E-value=1.1e+02 Score=22.99 Aligned_cols=33 Identities=18% Similarity=0.174 Sum_probs=21.6
Q ss_pred CCeeEEEecCCc--hhHHHHHHHc---------CCceEEEeccc
Q 040486 114 EPIACLITDATW--YFTQAVAESL---------KLSRIVLRTNS 146 (460)
Q Consensus 114 ~kpD~VI~D~~~--~~~~~~A~~l---------giP~v~~~~~~ 146 (460)
.+||+||.|... ..+..+.+.+ .+|.+.++...
T Consensus 57 ~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~ 100 (143)
T 3m6m_D 57 EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADV 100 (143)
T ss_dssp SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCC
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCC
Confidence 469999999754 2344444443 37888877653
No 473
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=20.02 E-value=3.3e+02 Score=21.59 Aligned_cols=48 Identities=4% Similarity=-0.003 Sum_probs=31.2
Q ss_pred hCCceeccccccchhhhHHHHhhhhcceeeeCCccCHHHHHHHHHHHhcc
Q 040486 370 EGVPMICQPCFGDQMVNARYVSDVWKVGLHLERKLERGEVERTIRRVMTE 419 (460)
Q Consensus 370 ~GvP~v~~P~~~DQ~~na~~v~~~~G~g~~~~~~~~~~~l~~~i~~ll~~ 419 (460)
..+|+|++--..|. ..+....+ .|+--.+.+.++.+.|..+|+.++..
T Consensus 78 ~~~~ii~lt~~~~~-~~~~~a~~-~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 78 PRTTLVALVEYESP-AVLSQIIE-LECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp TTCEEEEEECCCSH-HHHHHHHH-HTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCh-HHHHHHHH-cCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 45677776544443 34455555 37765565568888999999888765
Done!