BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040489
(413 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 158/342 (46%), Gaps = 42/342 (12%)
Query: 25 ISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIA 84
++ K P +LP++G+L +L + + L K GP+ ++ +G + + +
Sbjct: 1 MAKKTGAKYPKSLLSLPLVGSLPFLPRH-GHMHNNFFKLQKKYGPIYSVRMGTKTTVIVG 59
Query: 85 DRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPS 144
LA + L++ G F+ RP+ + T I S+N+ I+ A G W+L RR L +
Sbjct: 60 HHQLAKEVLIKKGKDFSGRPQ-MATLDIASNNRKGIAFADSGAHWQLHRR------LAMA 112
Query: 145 RVKSYKHARKWVLEILLNHLKS-----ESKNG---DRPVPVRVLDHFQYAMFCLLVLMCF 196
+K + + +I+ + + + NG D PV V A+ ++ L+CF
Sbjct: 113 TFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFV------AVTNVISLICF 166
Query: 197 GD--KLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVL 254
K + ++ I+N + ++++ P L KI K E+ + + ++L
Sbjct: 167 NTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWL-KIFPNKTLEKLKSHVKIRNDLL 225
Query: 255 VPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQL--------PEEKRKL-SEEEIVSL 305
++ K+ +S++ + +DTL+ ++ P++ +L S+ I++
Sbjct: 226 NKILENYKEKFRSDSIT--------NMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTT 277
Query: 306 CSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG 347
+ AG +TT++ ++W +A L+ +P V++ +Y EI VG
Sbjct: 278 IGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG 319
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 176/409 (43%), Gaps = 72/409 (17%)
Query: 34 PPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKAL 93
PPGPF P+IGN + ++ L + G V + +G P + + H+AL
Sbjct: 11 PPGPFAWPLIGNAAAVGQA---AHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQAL 67
Query: 94 VQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHAR 153
VQ G+ FADRP + ++VS + +++ Y W++ RR S ++++ +
Sbjct: 68 VQQGSAFADRPS-FASFRVVSGGR-SMAFGHYSEHWKVQRRAAH------SMMRNFFTRQ 119
Query: 154 KWVLEILLNHLKSESK---------NGDR----PVPVRVLDHFQYAMFCLLVLMCFGDKL 200
++L H+ SE++ + D P P+ V+ A+ ++ +CFG +
Sbjct: 120 PRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVV-----AVANVMSAVCFGCRY 174
Query: 201 --DESQIKKI--ENVQRTQLLAFGNF----NILNFWPRLSKIVFVKKWEQFLQMRRDQEN 252
D+ + +++ N + + + G+ L ++P + VF +F Q+ R+ N
Sbjct: 175 SHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVF----REFEQLNRNFSN 230
Query: 253 VLVPLIRARKKMKEEESL--SIKEREYVLSYVDTLLDLQLPEEKR----------KLSEE 300
++ K ++ ESL R+ + +++ L EK+ +L E
Sbjct: 231 FIL-----DKFLRHCESLRPGAAPRDMMDAFI-------LSAEKKAAGDSHGGGARLDLE 278
Query: 301 EIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENE---EGPKYRV 357
+ + ++ A DT STALQW++ ++P VQ V E+ VVG + G + +
Sbjct: 279 NVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNL 338
Query: 358 PLFLFICIPDLRIHMHLSLDDPECVRA----IWYSEKEDKESFWNKSTV 402
P L +R + + P A + Y +D F N+ +V
Sbjct: 339 PYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSV 387
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 144/334 (43%), Gaps = 37/334 (11%)
Query: 34 PPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKAL 93
PPGP+ P+IG++ L K+ L + + G V+ + IG P + ++ +AL
Sbjct: 13 PPGPWGWPLIGHMLTLGKN---PHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQAL 69
Query: 94 VQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRR---------NLSAEILHPS 144
V+ G F RP L T ++S+ Q S G W RR +++++ +
Sbjct: 70 VRQGDDFKGRPD-LYTFTLISNGQSMSFSPDSGPVWAARRRLAQNGLKSFSIASDPASST 128
Query: 145 RVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLD--- 201
+H K E+L++ L+ P R + ++ ++ +CFG + D
Sbjct: 129 SCYLEEHVSKEA-EVLISTLQELMAGPGHFNPYR---YVVVSVTNVICAICFGRRYDHNH 184
Query: 202 -ESQIKKIENVQRTQLLAFGN----FNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVP 256
E N +++ GN IL + P S F E+F +
Sbjct: 185 QELLSLVNLNNNFGEVVGSGNPADFIPILRYLPNPSLNAFKDLNEKFYSFMQK------- 237
Query: 257 LIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKR-KLSEEEIVSLCSEFLNAGTD 315
+++ K E+ + R+ S ++ + QL E +LS+E+I+++ + AG D
Sbjct: 238 MVKEHYKTFEKGHI----RDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFD 293
Query: 316 TTSTALQWIMANLVKHPHVQETVYTEIRGVVGEN 349
T +TA+ W + LV +P VQ + E+ V+G +
Sbjct: 294 TVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRS 327
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 146/330 (44%), Gaps = 30/330 (9%)
Query: 35 PGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALV 94
PGP LP +GN+ K F + H K G V + G +P + I D + LV
Sbjct: 17 PGPTPLPFLGNILSYHKGFCMFD---MECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLV 73
Query: 95 QNG-AIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHAR 153
+ ++F +R RP + S S + W+ R LS ++K
Sbjct: 74 KECYSVFTNR-RPFGPVGFMKS----AISIAEDEEWKRLRSLLSPTFTS-GKLKEMVPII 127
Query: 154 KWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFG---DKLDESQIKKIEN 210
++L+ +L+ E++ G PV + D F ++ FG D L+ Q +EN
Sbjct: 128 AQYGDVLVRNLRREAETGK---PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVEN 184
Query: 211 VQRTQLLAFGN--FNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEE 268
++ F + F + +P L I+ V F R+ N L ++ K+ + E+
Sbjct: 185 TKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF---PREVTNFLRKSVKRMKESRLED 241
Query: 269 SLSIKEREYVLSYVDTLLDLQLPEEK---RKLSEEEIVSLCSEFLNAGTDTTSTALQWIM 325
+ +++ + ++ ++D Q +E + LS+ E+V+ F+ AG +TTS+ L +IM
Sbjct: 242 T-----QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIM 296
Query: 326 ANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
L HP VQ+ + EI V+ N+ P Y
Sbjct: 297 YELATHPDVQQKLQEEIDAVL-PNKAPPTY 325
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 146/330 (44%), Gaps = 30/330 (9%)
Query: 35 PGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALV 94
PGP LP +GN+ K F + H K G V + G +P + I D + LV
Sbjct: 18 PGPTPLPFLGNILSYHKGFCMFD---MECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLV 74
Query: 95 QNG-AIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHAR 153
+ ++F +R RP + S S + W+ R LS ++K
Sbjct: 75 KECYSVFTNR-RPFGPVGFMKS----AISIAEDEEWKRLRSLLSPTFTS-GKLKEMVPII 128
Query: 154 KWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFG---DKLDESQIKKIEN 210
++L+ +L+ E++ G PV + D F ++ FG D L+ Q +EN
Sbjct: 129 AQYGDVLVRNLRREAETGK---PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVEN 185
Query: 211 VQRTQLLAFGN--FNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEE 268
++ F + F + +P L I+ V F R+ N L ++ K+ + E+
Sbjct: 186 TKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF---PREVTNFLRKSVKRMKESRLED 242
Query: 269 SLSIKEREYVLSYVDTLLDLQLPEEK---RKLSEEEIVSLCSEFLNAGTDTTSTALQWIM 325
+ +++ + ++ ++D Q +E + LS+ E+V+ F+ AG +TTS+ L +IM
Sbjct: 243 T-----QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIM 297
Query: 326 ANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
L HP VQ+ + EI V+ N+ P Y
Sbjct: 298 YELATHPDVQQKLQEEIDAVL-PNKAPPTY 326
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 146/330 (44%), Gaps = 30/330 (9%)
Query: 35 PGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALV 94
PGP LP +GN+ K F + H K G V + G +P + I D + LV
Sbjct: 19 PGPTPLPFLGNILSYHKGFCMFD---MECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLV 75
Query: 95 QNG-AIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHAR 153
+ ++F +R RP + S S + W+ R LS ++K
Sbjct: 76 KECYSVFTNR-RPFGPVGFMKS----AISIAEDEEWKRLRSLLSPTFTS-GKLKEMVPII 129
Query: 154 KWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFG---DKLDESQIKKIEN 210
++L+ +L+ E++ G PV + D F ++ FG D L+ Q +EN
Sbjct: 130 AQYGDVLVRNLRREAETGK---PVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDPFVEN 186
Query: 211 VQRTQLLAFGN--FNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEE 268
++ F + F + +P L I+ V F R+ N L ++ K+ + E+
Sbjct: 187 TKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVF---PREVTNFLRKSVKRMKESRLED 243
Query: 269 SLSIKEREYVLSYVDTLLDLQLPEEK---RKLSEEEIVSLCSEFLNAGTDTTSTALQWIM 325
+ +++ + ++ ++D Q +E + LS+ E+V+ F+ AG +TTS+ L +IM
Sbjct: 244 T-----QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIM 298
Query: 326 ANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
L HP VQ+ + EI V+ N+ P Y
Sbjct: 299 YELATHPDVQQKLQEEIDAVL-PNKAPPTY 327
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 154/353 (43%), Gaps = 43/353 (12%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGP LP+IGN+ L +I N GPV T++ G P +
Sbjct: 8 KGKLPPGPTPLPIIGNM--LQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRR-NLSAEILHPSRVKS 148
+AL+ NG F+ R P S+ ++ ISS G W+ RR +L+ +S
Sbjct: 66 KEALIDNGEEFSGRGNS-PISQRITKGLGIISSN--GKRWKEIRRFSLTTLRNFGMGKRS 122
Query: 149 YKHARKWVLEILLNHL-KSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKK 207
+ + L+ L K+++ D P +L + C +V D D++ +
Sbjct: 123 IEDRVQEEAHCLVEELRKTKASPCD---PTFILGCAPCNVICSVVFQKRFDYKDQNFLTL 179
Query: 208 IENVQRTQLLAFGNFNILNF-WPRLSKIVFVKKWEQFLQMRRDQENVL---VPLIRA--R 261
++ NF ILN W I + + N + V L R+ R
Sbjct: 180 MKRFNE-------NFRILNSPW-----IQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIR 227
Query: 262 KKMKEEE-SLSIKE-REYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTST 319
+K+KE + SL + R+++ ++ ++ + +K + + E +V ++ AGT+TTST
Sbjct: 228 EKVKEHQASLDVNNPRDFIDCFL-IKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTST 286
Query: 320 ALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHM 372
L++ + L+KHP V V EI V+G ++R P C+ D R HM
Sbjct: 287 TLRYGLLLLLKHPEVTAKVQEEIDHVIG------RHRSP-----CMQD-RSHM 327
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 142/333 (42%), Gaps = 40/333 (12%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGP P+IGN+ L +I L GPV T+++G +P + +
Sbjct: 8 KGKLPPGPTPFPIIGNI--LQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSY 149
+ALV G FA R +P + VS + S TW+ RR ++++
Sbjct: 66 KEALVDLGEEFAGRGS-VPILEKVSKGLG--IAFSNAKTWKEMRR------FSLMTLRNF 116
Query: 150 KHARKWVLEILLNHLKS-----ESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQ 204
++ + + + + N P +L + C ++ D DE
Sbjct: 117 GMGKRSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYKDEEF 176
Query: 205 IKKIENV-QRTQLLA------FGNF-NILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVP 256
+K +E++ + +LL + NF +L+++P + K + K +++ N ++
Sbjct: 177 LKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLL--KNADYIK------NFIME 228
Query: 257 LIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDT 316
++ +K+ L + ++D L E + + E +V S+ AGT+T
Sbjct: 229 KVKEHQKL-----LDVNNPR---DFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTET 280
Query: 317 TSTALQWIMANLVKHPHVQETVYTEIRGVVGEN 349
TST L++ + L+KHP V V EI V+G +
Sbjct: 281 TSTTLRYSLLLLLKHPEVAARVQEEIERVIGRH 313
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 148/334 (44%), Gaps = 39/334 (11%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
+ LPPGP LPVIGN+ L ++ L NL GPV TL+ G + + +
Sbjct: 9 RGKLPPGPTPLPVIGNI--LQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVV 66
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILH------- 142
+AL+ G F+ R P ++ +N+ S G W+ RR S L
Sbjct: 67 KEALIDLGEEFSGRGH-FPLAE--RANRGFGIVFSNGKRWKEIRR-FSLMTLRNFGMGKR 122
Query: 143 --PSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKL 200
RV+ + AR V E+ K+++ D P +L + C ++ D
Sbjct: 123 SIEDRVQ--EEARCLVEELR----KTKASPCD---PTFILGCAPCNVICSIIFQKRFDYK 173
Query: 201 DESQIKKIENV-QRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIR 259
D+ + +E + + ++++ I N +P + F + L+ E+ ++
Sbjct: 174 DQQFLNLMEKLNENIRIVSTPWIQICNNFPTIID-YFPGTHNKLLKNLAFMESDIL---- 228
Query: 260 ARKKMKE-EESLSIKEREYVLSYVDTLLDLQLPEEKRKLSE---EEIVSLCSEFLNAGTD 315
+K+KE +ES+ I ++D L E++ + SE E +V ++ L AGT+
Sbjct: 229 --EKVKEHQESMDINNPR---DFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTE 283
Query: 316 TTSTALQWIMANLVKHPHVQETVYTEIRGVVGEN 349
TTST L++ + L+KHP V V EI VVG N
Sbjct: 284 TTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRN 317
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 149/346 (43%), Gaps = 63/346 (18%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
+ LPPGP LPVIGN+ L +I L NL GPV TL+ G +P + +
Sbjct: 9 RGKLPPGPTPLPVIGNI--LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAV 66
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILH------- 142
+AL+ G F+ R P ++ +N+ S G W+ RR S L
Sbjct: 67 KEALIDLGEEFSGR-GIFPLAE--RANRGFGIVFSNGKKWKEIRR-FSLMTLRNFGMGKR 122
Query: 143 --PSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKL 200
RV+ + AR V E+ K+++ D P +L + C ++ D
Sbjct: 123 SIEDRVQ--EEARCLVEEL----RKTKASPCD---PTFILGCAPCNVICSIIFHKRFDYK 173
Query: 201 DESQIKKIENV-QRTQLLA------FGNFN-ILNFWPR-----LSKIVFVKKWEQFLQMR 247
D+ + +E + + ++L+ NF+ I++++P L + F+K +
Sbjct: 174 DQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSY------- 226
Query: 248 RDQENVLVPLIRARKKMKE-EESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSL- 305
+K+KE +ES+ + + ++D L E+ + SE I SL
Sbjct: 227 ------------ILEKVKEHQESMDMNNPQ---DFIDCFLMKMEKEKHNQPSEFTIESLE 271
Query: 306 --CSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGEN 349
+ AGT+TTST L++ + L+KHP V V EI V+G N
Sbjct: 272 NTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 317
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 143/340 (42%), Gaps = 59/340 (17%)
Query: 34 PPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKAL 93
PPGP LPVIGN+ L +I L NL GPV TL+ G +P + + +AL
Sbjct: 11 PPGPTPLPVIGNI--LQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEAL 68
Query: 94 VQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRV--KSYKH 151
+ G F+ R P ++ +N+ S G W+ RR S L + +S +
Sbjct: 69 IDLGEEFSGR-GIFPLAE--RANRGFGIVFSNGKKWKEIRR-FSLMTLRNFGMGKRSIED 124
Query: 152 ARKWVLEILLNHLKSESKNGDRP------VPVRVL------DHFQYAMFCLLVLMCFGDK 199
+ L+ L+ + P P V+ F Y L LM +K
Sbjct: 125 RVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLM---EK 181
Query: 200 LDESQIKKIENVQRTQLLAFGNF-NILNFWPR-----LSKIVFVKKWEQFLQMRRDQENV 253
L+E+ IE + + + NF +L+++P L + F+K +
Sbjct: 182 LNEN----IEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSY------------- 224
Query: 254 LVPLIRARKKMKE-EESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSL---CSEF 309
+K+KE +ES+ + + ++D L E+ + SE I SL +
Sbjct: 225 ------ILEKVKEHQESMDMNNPQ---DFIDCFLMKMEKEKHNQPSEFTIESLENTAVDL 275
Query: 310 LNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGEN 349
AGT+TTST L++ + L+KHP V V EI V+G N
Sbjct: 276 FGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRN 315
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 138/340 (40%), Gaps = 40/340 (11%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGP LP IGN +L + ++ L + + GPV T+ +GPR + +
Sbjct: 8 KGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSY 149
+ALV F+ R + YG + R + ++ +
Sbjct: 66 REALVDQAEEFSGRGEQATFDWVFKG---------YGVVFSNGERAKQLRRFSIATLRDF 116
Query: 150 KHARKWVLE-------ILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE 202
++ + E L++ L+ G P L + ++ + FGD+ D
Sbjct: 117 GVGKRGIEERIQEEAGFLIDALRG--TGGANIDPTFFLSR---TVSNVISSIVFGDRFDY 171
Query: 203 SQIKKIENVQRTQL--LAFGNFNILNFWPRLSKIV--FVKKWEQFLQMRRDQENVLVPLI 258
K+ ++ R L F + + + S ++ +Q Q+ + E+ + +
Sbjct: 172 KD-KEFLSLLRMMLGSFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKV 230
Query: 259 RARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN---AGTD 315
++ + S ++D+ L EEK +E + +L LN AGT+
Sbjct: 231 EHNQRTLDPNSPR--------DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTE 282
Query: 316 TTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
T ST L++ L+KHP V+ V+ EI V+G+N + PK+
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKF 321
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 144/345 (41%), Gaps = 50/345 (14%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGP LP IGN +L + ++ L + + GPV T+ +GPR + +
Sbjct: 8 KGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSY 149
+ALV F+ R + YG + R + ++ +
Sbjct: 66 KEALVDQAEEFSGRGEQATFDWLFKG---------YGVAFSNGERAKQLRRFSIATLRGF 116
Query: 150 KHARKWVLE-------ILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE 202
++ + E L++ L+ +G P L + ++ + FGD+ D
Sbjct: 117 GVGKRGIEERIQEEAGFLIDALRG--THGANIDPTFFLSR---TVSNVISSIVFGDRFD- 170
Query: 203 SQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARK 262
+ K+ ++ R L +F + + + +E F + + ++ P +A K
Sbjct: 171 YEDKEFLSLLRMMLGSF----------QFTATSTGQLYEMFSSVMK---HLPGPQQQAFK 217
Query: 263 KMKEEESLSIKEREY---------VLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN-- 311
+++ E K+ E+ ++D+ L EEK +E + +L LN
Sbjct: 218 ELQGLEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLF 277
Query: 312 -AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
AGT+T ST L++ L+KHP V+ V+ EI V+G+N + PK+
Sbjct: 278 FAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKF 321
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 137/340 (40%), Gaps = 40/340 (11%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGP LP IGN +L + ++ L + + GPV T+ +GPR + +
Sbjct: 8 KGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSY 149
+ALV F+ R + YG + R + ++ +
Sbjct: 66 REALVDQAEEFSGRGEQATFDWVFK---------GYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 150 KHARKWVLE-------ILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE 202
++ + E L++ L+ G P L + ++ + FGD+ D
Sbjct: 117 GVGKRGIEERIQEEAGFLIDALR--GTGGANIDPTFFLSR---TVSNVISSIVFGDRFDY 171
Query: 203 SQIKKIENVQRTQL--LAFGNFNILNFWPRLSKIV--FVKKWEQFLQMRRDQENVLVPLI 258
K+ ++ R L F + + + S ++ +Q Q+ + E+ + +
Sbjct: 172 KD-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKV 230
Query: 259 RARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN---AGTD 315
++ + S ++D+ L EEK +E + +L LN GT+
Sbjct: 231 EHNQRTLDPNSPR--------DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTE 282
Query: 316 TTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
T ST L++ L+KHP V+ V+ EI V+G+N + PK+
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKF 321
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 137/334 (41%), Gaps = 43/334 (12%)
Query: 34 PPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKAL 93
PP P+ P++G++ L K+ L + + G V+ + IG P + ++ +AL
Sbjct: 18 PPEPWGWPLLGHVLTLGKN---PHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQAL 74
Query: 94 VQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHAR 153
V+ G F RP L TS +++ Q S G W RR L+ L+ + S +
Sbjct: 75 VRQGDDFKGRPD-LYTSTLITDGQSLTFSTDSGPVWAA-RRRLAQNALNTFSIASDPASS 132
Query: 154 KWVLEILLNHLKSESKN--------GDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQI 205
L H+ E+K P + ++ ++ MCFG ES
Sbjct: 133 SSCY--LEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSD 190
Query: 206 KKIENVQRTQ--LLAFGNFNILNFWPRLSKI---------VFVKKWEQFLQMRRDQENVL 254
+ + V+ T + + N L+F+P L + F +++ FLQ
Sbjct: 191 EMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKT------- 243
Query: 255 VPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKL-SEEEIVSLCSEFLNAG 313
++ ++ + S+++ L + P L +E+IV+L ++ AG
Sbjct: 244 -----VQEHYQDFDKNSVRDITGALFKHSK----KGPRASGNLIPQEKIVNLVNDIFGAG 294
Query: 314 TDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG 347
DT +TA+ W + LV P +Q + E+ V+G
Sbjct: 295 FDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIG 328
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 136/340 (40%), Gaps = 40/340 (11%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGP LP IGN +L + ++ L + + GPV T+ +GPR + +
Sbjct: 8 KGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSY 149
+ALV F+ R + YG + R + ++ +
Sbjct: 66 REALVDQAEEFSGRGEQATFDWVFK---------GYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 150 KHARKWVLE-------ILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE 202
++ + E L++ L+ G P L + ++ + FGD+ D
Sbjct: 117 GVGKRGIEERIQEEAGFLIDALR--GTGGANIDPTFFLSR---TVSNVISSIVFGDRFDY 171
Query: 203 SQIKKIENVQRTQL--LAFGNFNILNFWPRLSKIV--FVKKWEQFLQMRRDQENVLVPLI 258
K+ ++ R L F + + + S ++ +Q Q+ + E+ + +
Sbjct: 172 KD-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKV 230
Query: 259 RARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSE---EEIVSLCSEFLNAGTD 315
++ + S ++D+ L EEK +E + +V + GT+
Sbjct: 231 EHNQRTLDPNSPR--------DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTE 282
Query: 316 TTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
T ST L++ L+KHP V+ V+ EI V+G+N + PK+
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKF 321
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 136/340 (40%), Gaps = 40/340 (11%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGP LP IGN +L + ++ L + + GPV T+ +GPR + +
Sbjct: 8 KGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSY 149
+ALV F+ R + YG + R + ++ +
Sbjct: 66 REALVDQAEEFSGRGEQATFDWVFK---------GYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 150 KHARKWVLE-------ILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE 202
++ + E L++ L+ G P L + ++ + FGD+ D
Sbjct: 117 GVGKRGIEERIQEEAGFLIDALR--GTGGANIDPTFFLSR---TVSNVISSIVFGDRFDY 171
Query: 203 SQIKKIENVQRTQL--LAFGNFNILNFWPRLSKIV--FVKKWEQFLQMRRDQENVLVPLI 258
K+ ++ R L F + + + S ++ +Q Q+ + E+ + +
Sbjct: 172 KD-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKV 230
Query: 259 RARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSE---EEIVSLCSEFLNAGTD 315
++ + S ++D+ L EEK +E + +V + GT+
Sbjct: 231 EHNQRTLDPNSPR--------DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTE 282
Query: 316 TTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
T ST L++ L+KHP V+ V+ EI V+G+N + PK+
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKF 321
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 137/331 (41%), Gaps = 38/331 (11%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGPF LP+IGNL L I L + GPV TL++G + + +
Sbjct: 8 KGKLPPGPFPLPIIGNLFQL--ELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASY--GTTWRLFRRNLSAEILHPSRVK 147
+AL+ F+ R + + + H + G TW+ RR + + K
Sbjct: 66 KEALLDYKDEFSGR------GDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMGK 119
Query: 148 SYKHAR-KWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIK 206
+R + LL L+ K +P L A ++ + F D +
Sbjct: 120 QGNESRIQREAHFLLEALR---KTQGQPFDPTFL--IGCAPCNVIADILFRKHFDYND-- 172
Query: 207 KIENVQRTQLLAFGNFNILNF-WPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMK 265
E R L NF++L+ W +L + FL +I+ ++K
Sbjct: 173 --EKFLRLMYLFNENFHLLSTPWLQL-----YNNFPSFLHYLPGSHR---KVIKNVAEVK 222
Query: 266 EEESLSIKEREYVL--SYVDTLLDLQLPE-EKRKLSEEEIVSL------CSEFLNAGTDT 316
E S +KE L + L D L E EK K S E + ++ ++ AGT+T
Sbjct: 223 EYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTET 282
Query: 317 TSTALQWIMANLVKHPHVQETVYTEIRGVVG 347
TST L++ + L+K+P ++E ++ EI V+G
Sbjct: 283 TSTTLRYGLLILMKYPEIEEKLHEEIDRVIG 313
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 135/340 (39%), Gaps = 40/340 (11%)
Query: 30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLA 89
K LPPGP LP IGN +L + ++ L + + GPV T+ +GPR + +
Sbjct: 8 KGKLPPGPTPLPFIGN--YLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAV 65
Query: 90 HKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSY 149
+ALV F+ R + YG + R + ++ +
Sbjct: 66 REALVDQAEEFSGRGEQATFDWVFK---------GYGVVFSNGERAKQLRRFSIATLRDF 116
Query: 150 KHARKWVLE-------ILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE 202
++ + E L++ L+ G P L + ++ + FGD+ D
Sbjct: 117 GVGKRGIEERIQEEAGFLIDALR--GTGGANIDPTFFLSR---TVSNVISSIVFGDRFDY 171
Query: 203 SQIKKIENVQRTQL--LAFGNFNILNFWPRLSKIV--FVKKWEQFLQMRRDQENVLVPLI 258
K+ ++ R L F + + + S ++ +Q Q + E+ + +
Sbjct: 172 KD-KEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQCLQGLEDFIAKKV 230
Query: 259 RARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSE---EEIVSLCSEFLNAGTD 315
++ + S ++D+ L EEK +E + +V + GT+
Sbjct: 231 EHNQRTLDPNSPR--------DFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTE 282
Query: 316 TTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKY 355
T ST L++ L+KHP V+ V+ EI V+G+N + PK+
Sbjct: 283 TVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKF 321
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 129/307 (42%), Gaps = 42/307 (13%)
Query: 60 LRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHN 119
L +L KLGPV L +G + + + + +A+++ FA RP+ +P+ K+VS +
Sbjct: 49 LLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQ-IPSYKLVSQRCQD 107
Query: 120 ISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRV 179
IS Y W+ ++ + +L +R WV + L E PV +
Sbjct: 108 ISLGDYSLLWKAHKKLTRSALLLGTR----SSMEPWVDQ--LTQEFCERMRVQAGAPVTI 161
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNI--------LNFWP-- 229
F ++ + FG+K +++ + + + + + +++I L F+P
Sbjct: 162 QKEFSLLTCSIICYLTFGNK-EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPNP 220
Query: 230 ---RLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLL 286
RL + + + Q+RR +E+++ R +Y+L V
Sbjct: 221 GLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMT-------------DYMLQGVGRQ- 266
Query: 287 DLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
++ E +L E + + GT+TT++ L W +A L+ HP +Q + E+
Sbjct: 267 --RVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEEL---- 320
Query: 347 GENEEGP 353
+ E GP
Sbjct: 321 -DRELGP 326
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 19/294 (6%)
Query: 62 NLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVS--SNQHN 119
L + G V +L + P + + + +ALV +G ADRP P+P ++I+
Sbjct: 38 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP-PVPITQILGFGPRSQG 96
Query: 120 ISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPV-PVR 178
+ A YG WR RR + + + K K +WV E + + + RP P
Sbjct: 97 VFLARYGPAWREQRRFSVSTLRNLGLGK--KSLEQWVTEEAACLCAAFANHSGRPFRPNG 154
Query: 179 VLDHFQYAMFCLLVLMCFGDKL--DESQIKKIENVQRTQLLAFGNF--NILNFWPRLSKI 234
+LD A+ ++ + G + D+ + ++ ++ + L F +LN P L I
Sbjct: 155 LLDK---AVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI 211
Query: 235 VFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEK 294
+ ++ R Q+ L L + + + R+ +++ + + E
Sbjct: 212 PALAG-----KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPES 266
Query: 295 RKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGE 348
++E + + ++ +AG TTST L W + ++ HP VQ V EI V+G+
Sbjct: 267 -SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ 319
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 30 KTNLPPGPFNLPVIGNL-----QWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIA 84
K LPPGP LPV+GNL + LL+SF LR L K G V T+++G RP + +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSF------LR-LREKYGDVFTVYLGSRPVVVLC 60
Query: 85 DRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRR 134
+ALV F+ R + I + + A+ G WR RR
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQG--YGVIFAN-GERWRALRR 107
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 281 YVDTLLDLQLPEEKRKLSEE-----EIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQ 335
++D L L++ ++K S E I+++ S F AGT+TTST L++ ++K+PHV
Sbjct: 245 FIDVYL-LRMEKDKSDPSSEFHHQNLILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHVT 302
Query: 336 ETVYTEIRGVVGEN 349
E V EI V+G +
Sbjct: 303 ERVQKEIEQVIGSH 316
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 30 KTNLPPGPFNLPVIGNL-----QWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIA 84
K LPPGP LPV+GNL + LL+SF LR L K G V T+++G RP + +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSF------LR-LREKYGDVFTVYLGSRPVVVLC 60
Query: 85 DRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRR 134
+ALV F+ R + I + + A+ G WR RR
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQG--YGVIFAN-GERWRALRR 107
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 281 YVDTLLDLQLPEEKRKLSEE-----EIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQ 335
++D L L++ ++K S E I+++ S F AGT+TTST L++ ++K+PHV
Sbjct: 245 FIDVYL-LRMEKDKSDPSSEFHHQNLILTVLSLF-AAGTETTSTTLRYGFLLMLKYPHVT 302
Query: 336 ETVYTEIRGVVGEN 349
E V EI V+G +
Sbjct: 303 ERVQKEIEQVIGSH 316
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 30 KTNLPPGPFNLPVIGNL-----QWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIA 84
K LPPGP LPV+GNL + LL+SF LR L K G V T+++G RP + +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSF------LR-LREKYGDVFTVYLGSRPVVVLC 60
Query: 85 DRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRR 134
+ALV F+ R + I + + A+ G WR RR
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQG--YGVIFAN-GERWRALRR 107
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 281 YVDTLLDLQLPEEKRKLSEE-----EIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQ 335
++D L L++ ++K S E I+++ S F AGT+TTST L++ ++K+PHV
Sbjct: 245 FIDVYL-LRMEKDKSDPSSEFHHQNLILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHVT 302
Query: 336 ETVYTEIRGVVGEN 349
E V EI V+G +
Sbjct: 303 ERVQKEIEQVIGSH 316
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 30 KTNLPPGPFNLPVIGNL-----QWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIA 84
K LPPGP LPV+GNL + LL+SF LR L K G V T+++G RP + +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSF------LR-LREKYGDVFTVYLGSRPVVVLC 60
Query: 85 DRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRR 134
+ALV F+ R + I + + A+ G WR RR
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQG--YGVIFAN-GERWRALRR 107
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 7/74 (9%)
Query: 281 YVDTLLDLQLPEEKRKLSEEE-----IVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQ 335
++D L L++ ++K S E I+++ S F AGT+TTST L++ ++K+PHV
Sbjct: 245 FIDVYL-LRMEKDKSDPSSEFHHQNLILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHVT 302
Query: 336 ETVYTEIRGVVGEN 349
E V EI V+G +
Sbjct: 303 ERVQKEIEQVIGSH 316
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 15/110 (13%)
Query: 30 KTNLPPGPFNLPVIGNL-----QWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIA 84
K LPPGP LPV+GNL + LL+SF LR L K G V T+++G RP + +
Sbjct: 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSF------LR-LREKYGDVFTVYLGSRPVVVLC 60
Query: 85 DRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRR 134
+ALV F+ R + I + + A+ G WR RR
Sbjct: 61 GTDAIREALVDQAEAFSGRGKIAVVDPIFQG--YGVIFAN-GERWRALRR 107
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 280 SYVDTLLDLQLPEEKRKLSEEE-----IVSLCSEFLNAGTDTTSTALQWIMANLVKHPHV 334
++D L L++ ++K S E I+++ S F AGT+TTST L++ ++K+PHV
Sbjct: 244 DFIDVYL-LRMEKDKSDPSSEFHHQNLILTVLSLFF-AGTETTSTTLRYGFLLMLKYPHV 301
Query: 335 QETVYTEIRGVVGEN 349
E V EI V+G +
Sbjct: 302 TERVQKEIEQVIGSH 316
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 238 KKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKL 297
KK+E+ ++ +D VL+ R+++ EE L +D +L L E++ L
Sbjct: 242 KKYEKSVKDLKDAIEVLIA--EKRRRISTEEKLE--------ECMDFATELILAEKRGDL 291
Query: 298 SEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENE 350
+ E + E L A DT S +L +++ + KHP+V+E + EI+ V+GE +
Sbjct: 292 TRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD 344
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 125/294 (42%), Gaps = 19/294 (6%)
Query: 62 NLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVS--SNQHN 119
L + G V +L + P + + + +ALV +G ADRP P+P ++I+
Sbjct: 38 QLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRP-PVPITQILGFGPRSQG 96
Query: 120 ISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPV-PVR 178
+ A YG WR RR + + + K K +WV E + + + RP P
Sbjct: 97 VFLARYGPAWREQRRFSVSTLRNLGLGK--KSLEQWVTEEAACLCAAFANHSGRPFRPNG 154
Query: 179 VLDHFQYAMFCLLVLMCFGDKL--DESQIKKIENVQRTQLLAFGNF--NILNFWPRLSKI 234
+LD A+ ++ + G + D+ + ++ ++ + L F +LN P I
Sbjct: 155 LLDK---AVSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVDRHI 211
Query: 235 VFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEK 294
+ ++ R Q+ L L + + + R+ +++ + + E
Sbjct: 212 PALAG-----KVLRFQKAFLTQLDELLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPES 266
Query: 295 RKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGE 348
++E + + ++ +AG TTST L W + ++ HP VQ V EI V+G+
Sbjct: 267 -SFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQ 319
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 129/302 (42%), Gaps = 32/302 (10%)
Query: 60 LRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHN 119
+R G + +L +G + + + + LV IFADRP LP + +
Sbjct: 40 MRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP-CLPLF-MKMTKMGG 97
Query: 120 ISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKS-----ESKNGDRP 174
+ ++ YG W RR L + + + + +K +L K E+ G RP
Sbjct: 98 LLNSRYGRGWVDHRR------LAVNSFRYFGYGQKSFESKILEETKFFNDAIETYKG-RP 150
Query: 175 VPVRVLDHFQYAMFCLLVLMCFGDKL--DESQIKKI-----ENVQRTQLLAFGNFNILNF 227
+ L A+ + L+ FG++ +++ + + ENV +L A + + N
Sbjct: 151 FDFKQL--ITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENV---ELAASASVFLYNA 205
Query: 228 WPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLD 287
+P + + F K + F R+ V L R +K + + +V +Y+D +D
Sbjct: 206 FPWIGILPFGKHQQLF----RNAAVVYDFLSRLIEKASVNRKPQLPQ-HFVDAYLDE-MD 259
Query: 288 LQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG 347
+ S+E ++ E + AGT+TT+ L+W + + +P++Q V EI ++G
Sbjct: 260 QGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMG 319
Query: 348 EN 349
N
Sbjct: 320 PN 321
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 137/315 (43%), Gaps = 33/315 (10%)
Query: 48 WLLKSFSEIEPILRNLHSKL-GPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRP 106
+ L + SE+ + S++ G + +L +G + + + + LV IFADRP
Sbjct: 27 YSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP-C 85
Query: 107 LPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKS 166
LP + + + ++ YG W RR L + + + + +K +L K
Sbjct: 86 LPLF-MKMTKMGGLLNSRYGRGWVDHRR------LAVNSFRYFGYGQKSFESKILEETKF 138
Query: 167 -----ESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKL--DESQIKKI-----ENVQRT 214
E+ G RP + L A+ + L+ FG++ +++ + + ENV
Sbjct: 139 FNDAIETYKG-RPFDFKQL--ITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENV--- 192
Query: 215 QLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKE 274
+L A + + N +P + + F K + F R+ V L R +K + +
Sbjct: 193 ELAASASVFLYNAFPWIGILPFGKHQQLF----RNAAVVYDFLSRLIEKASVNRKPQLPQ 248
Query: 275 REYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHV 334
+V +Y+D +D + S+E ++ E + AGT+TT+ L+W + + +P++
Sbjct: 249 -HFVDAYLDE-MDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNI 306
Query: 335 QETVYTEIRGVVGEN 349
Q V EI ++G N
Sbjct: 307 QGQVQKEIDLIMGPN 321
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 125/320 (39%), Gaps = 54/320 (16%)
Query: 47 QWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRP 106
+ LLKSF LR K G V T+ +GPRP + + +ALV F+ R +
Sbjct: 30 RGLLKSF------LR-FREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGRGKI 82
Query: 107 LPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLE-------I 159
+ + A+ G W++ RR + ++ + ++ V E
Sbjct: 83 AMVDPFFRG--YGVIFAN-GNRWKVLRR------FSVTTMRDFGMGKRSVEERIQEEAQC 133
Query: 160 LLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAF 219
L+ L+ G P + + C +V FG + + Q + L
Sbjct: 134 LIEELR--KSKGALMDPTFLFQSITANIICSIV---FGKRF---------HYQDQEFLKM 179
Query: 220 GNFNILNFWPRLSKI--VFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREY 277
N F+ S I VF + +E F + + + +++ S+++
Sbjct: 180 LNL----FYQTFSLISSVFGQLFELFSGFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRE 235
Query: 278 VL------SYVDTLLDLQLPEEK----RKLSEEEIVSLCSEFLNAGTDTTSTALQWIMAN 327
L +DT L L + +EK + S + + AGT+TTST L++
Sbjct: 236 TLDPSAPRDLIDTYL-LHMEKEKSNAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLL 294
Query: 328 LVKHPHVQETVYTEIRGVVG 347
++K+PHV E VY EI V+G
Sbjct: 295 MLKYPHVAERVYREIEQVIG 314
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 121/326 (37%), Gaps = 30/326 (9%)
Query: 35 PGPFNLPVIGNLQWLL--KSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKA 92
PGP N P++G+L + + L H K G + + +G ++ + SL
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 93 LVQNGAIFADRPRPLPTSKIVSSNQHNISSASY----GTTWRLFRRNLSAEILHPSRVKS 148
A P+ L + H + G W+ R +++ P +
Sbjct: 87 YRTESA----HPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMK 142
Query: 149 YKHARKWVLEILLNHLKS-ESKNGDRPVPVRVLDHFQYAMFCLLVL-MCFG--DKLDESQ 204
VL L + + G P L+ + + CL++ FG K E +
Sbjct: 143 LDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEE 202
Query: 205 IKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKM 264
+T + FG + L K + K W+ + P I R +
Sbjct: 203 ALTFITAIKTMMSTFGKMMVTPV--ELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQR 260
Query: 265 KEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWI 324
++ + D L D+ ++ LS++E+ + +E A +TT+ +L WI
Sbjct: 261 YSQQPGA-----------DFLCDIY---QQDHLSKKELYAAVTELQLAAVETTANSLMWI 306
Query: 325 MANLVKHPHVQETVYTEIRGVVGENE 350
+ NL ++P Q + E++ V+ +N+
Sbjct: 307 LYNLSRNPQAQRRLLQEVQSVLPDNQ 332
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 259 RARKKMKEEESLSIKER----EYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGT 314
RA +++K+ +I++R E + + TLLD ++ R L+++E+ + L AG
Sbjct: 207 RAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATY-KDGRPLTDDEVAGMLIGLLLAGQ 265
Query: 315 DTTSTALQWIMANLVKHPHVQETVYTEIRGVVGEN 349
T+ST W+ L + +Q+ Y E + V GEN
Sbjct: 266 HTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN 300
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 288 LQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTE 341
LQ + +LS +E+V+L + AGTDTT + + + NL++ P E V E
Sbjct: 230 LQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 288 LQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTE 341
LQ + +LS +E+V+L + AGTDTT + + + NL++ P E V E
Sbjct: 230 LQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE 283
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 93/221 (42%), Gaps = 17/221 (7%)
Query: 128 TWRLFRRNLSAEILHPSRVKSYKHARKWVLE--ILLNHLKSESKNGDRPVPVRVLDHFQY 185
TW+ R L+ E++ P +K++ V + + L H + + + + V D F +
Sbjct: 108 TWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFVSLLHKRIKQQGSGKFVGDIKEDLFHF 167
Query: 186 AMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFN----ILNFWPRLSKIVFVKKWE 241
A + +M FG++L + Q+ + F+ +LN P L ++ K W
Sbjct: 168 AFESITNVM-FGERLGMLEETVNPEAQKFIDAVYKMFHTSVPLLNVPPELYRLFRTKTW- 225
Query: 242 QFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEE 301
RD + +K E ++ + +Y L L L EK L E+
Sbjct: 226 ------RDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRNYPGILYCL-LKSEKMLL--ED 276
Query: 302 IVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEI 342
+ + +E L G +TTS LQW + + + +VQE + E+
Sbjct: 277 VKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEV 317
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 296 KLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEI 342
K+S E+I + +E L G DTTS LQW + + ++ VQ+ + E+
Sbjct: 267 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV 313
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 296 KLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEI 342
K+S E+I + +E L G DTTS LQW + + ++ VQ+ + E+
Sbjct: 270 KMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV 316
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 216 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 266
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 267 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 301
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 214 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 264
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 265 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 299
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 214 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 264
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 265 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 299
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 216 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 266
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 267 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 301
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 214 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 264
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 265 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 299
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 214 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 264
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 265 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 299
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 216 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 266
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 267 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 301
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + + +L+ + PE L + I FL
Sbjct: 213 NDLVDKIIADRKASGEQSDDL---------LTQMLNGKDPETGEPLDDGNISYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + V E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL 298
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L + PE L +E I FL
Sbjct: 219 NDLVDKIIADRKASGEQS------DDLLTH---MLHGKDPETGEPLDDENIRYQIVTFLI 269
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 270 AGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVL 304
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLA 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG + TS L + + LVK+PHV + E V+
Sbjct: 264 AGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 214 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLA 264
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG + TS L + + LVK+PHV + E V+
Sbjct: 265 AGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL 299
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 297 LSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG 347
+ E+EI L G++T ++ + W++ L HP + + E+ V G
Sbjct: 259 IGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTG 309
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG ++TS L + + LVK+PHV + E V+
Sbjct: 264 AGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG ++TS L + + LVK+PHV + E V+
Sbjct: 264 AGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L + PE L +E I FL
Sbjct: 214 NDLVDKIIADRKASGEQS------DDLLTH---MLHGKDPETGEPLDDENIRYQIITFLI 264
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 265 AGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL 299
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 214 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 264
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG ++TS L + + LVK+PHV + E V+
Sbjct: 265 AGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL 299
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG + TS L + + LVK+PHV + E V+
Sbjct: 264 AGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG + TS L + + LVK+PHV + E V+
Sbjct: 264 AGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
G +TTS L + + LVK+PHV + E V+
Sbjct: 264 CGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG + TS L + + LVK+PHV + E V+
Sbjct: 264 AGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG + TS L + + LVK+PHV + E V+
Sbjct: 264 AGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
G +TTS L + + LVK+PHV + E V+
Sbjct: 264 QGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
G +TTS L + + LVK+PHV + E V+
Sbjct: 264 KGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
G +TTS L + + LVK+PHV + E V+
Sbjct: 264 MGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
G +TTS L + + LVK+PHV + E V+
Sbjct: 264 EGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3UVV|A Chain A, Crystal Structure Of The Ligand Binding Domains Of The
Thyroid Receptor:retinoid X Receptor Complexed With
3,3',5 Triiodo-L- Thyronine And 9-Cis Retinoic Acid
Length = 265
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNF------NILNFWPRL-- 231
LD + A+ ++LM D+ + KIE Q T LLAF ++ NI +FWP+L
Sbjct: 166 LDDTEVALLQAVLLMS-SDRTGLICVDKIEKCQETYLLAFEHYINYRKHNIPHFWPKLLM 224
Query: 232 ----SKIVFVKKWEQFLQMRRDQENVLVP 256
+++ +FL M+ + L P
Sbjct: 225 KVTDLRMIGACHASRFLHMKVECPTELFP 253
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
G +TTS L + + LVK+PHV + E V+
Sbjct: 264 HGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLA 263
Query: 312 AGTDTTSTALQWIMANLVKHPH 333
AG + TS L + + LVK+PH
Sbjct: 264 AGHEATSGLLSFALYFLVKNPH 285
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I FL
Sbjct: 214 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITFLA 264
Query: 312 AGTDTTSTALQWIMANLVKHPH 333
AG + TS L + + LVK+PH
Sbjct: 265 AGHEATSGLLSFALYFLVKNPH 286
>pdb|3HZF|A Chain A, Structure Of Tr-alfa Bound To Selective Thyromimetic Gc-1
In C2 Space Group
Length = 269
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNF------NILNFWPRL-- 231
LD + A+ ++LM D+ + KIE Q LLAF ++ NI +FWP+L
Sbjct: 170 LDDTEVALLQAVLLMS-TDRSGLLXVDKIEKSQEAYLLAFEHYVNHRKHNIPHFWPKLLM 228
Query: 232 ----SKIVFVKKWEQFLQMRRDQENVLVP 256
+++ +FL M+ + L P
Sbjct: 229 KVTDLRMIGAXHASRFLHMKVEXPTELFP 257
>pdb|3JZB|A Chain A, Crystal Structure Of Tr-Alfa Bound To The Selective
Thyromimetic Triac
pdb|3ILZ|A Chain A, Structure Of Tr-Alfa Bound To Selective Thyromimetic Gc-1
In Space Group
Length = 267
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNF------NILNFWPRL-- 231
LD + A+ ++LM D+ + KIE Q LLAF ++ NI +FWP+L
Sbjct: 168 LDDTEVALLQAVLLMS-TDRSGLLXVDKIEKSQEAYLLAFEHYVNHRKHNIPHFWPKLLM 226
Query: 232 ----SKIVFVKKWEQFLQMRRDQENVLVP 256
+++ +FL M+ + L P
Sbjct: 227 KVTDLRMIGAXHASRFLHMKVEXPTELFP 255
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 252 NVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLN 311
N LV I A +K E+S + +L++ +L+ + PE L +E I L
Sbjct: 213 NDLVDKIIADRKASGEQS------DDLLTH---MLNGKDPETGEPLDDENIRYQIITELI 263
Query: 312 AGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVV 346
AG +TTS L + + LVK+PHV + E V+
Sbjct: 264 AGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL 298
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 255 VPLIRARKKMKEEESLSIKEREYVLSYV---------DTLLDLQLPEEKRKLSEEEIVSL 305
+ R+RK + E ++++ Y + D + L EK KL+EEE S
Sbjct: 168 IDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHPQQDMISMLLKGREKDKLTEEEAAST 227
Query: 306 CSEFLNAGTDTTSTALQWIMANLVKHP 332
C AG +TT + + L++HP
Sbjct: 228 CILLAIAGHETTVNLISNSVLCLLQHP 254
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 282 VDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTE 341
+D L+ ++ + S +EI + + AG T+S W + L++H V E
Sbjct: 226 LDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDE 285
Query: 342 IRGVVGEN 349
+ + G+
Sbjct: 286 LDELYGDG 293
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 193 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 238
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 239 KRMCGALLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 275
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 282 VDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTE 341
+D L+ ++ + S +EI + + AG T+S W + L++H V E
Sbjct: 226 LDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDE 285
Query: 342 IRGVVGEN 349
+ + G+
Sbjct: 286 LDELYGDG 293
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 282 VDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTE 341
+D L+ ++ + S +EI + + AG T+S W + L++H V E
Sbjct: 226 LDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDE 285
Query: 342 IRGVVGEN 349
+ + G+
Sbjct: 286 LDELYGDG 293
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 282 VDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTE 341
+D L+ ++ + S +EI + + AG T+S W + L++H V E
Sbjct: 226 LDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDE 285
Query: 342 IRGVVGEN 349
+ + G+
Sbjct: 286 LDELYGDG 293
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 184 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 229
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 230 KRMCGALLLGGLDTVVNFLSFSMEFLAKSPEHRQELI 266
>pdb|3NR6|A Chain A, Crystal Structure Of Xenotropic Murine Leukemia
Virus-Related Virus (Xmrv) Protease
pdb|3NR6|B Chain B, Crystal Structure Of Xenotropic Murine Leukemia
Virus-Related Virus (Xmrv) Protease
pdb|3SLZ|A Chain A, The Crystal Structure Of Xmrv Protease Complexed With Tl-3
pdb|3SLZ|B Chain B, The Crystal Structure Of Xmrv Protease Complexed With Tl-3
pdb|3SM1|A Chain A, The Crystal Structure Of Xmrv Protease Complexed With
Pepstatin A
pdb|3SM1|B Chain B, The Crystal Structure Of Xmrv Protease Complexed With
Pepstatin A
pdb|3SM2|A Chain A, The Crystal Structure Of Xmrv Protease Complexed With
Amprenavir
pdb|3SM2|B Chain B, The Crystal Structure Of Xmrv Protease Complexed With
Amprenavir
pdb|4EXH|A Chain A, The Crystal Structure Of Xmrv Protease Complexed With
Acetyl-Pepstatin
pdb|4EXH|B Chain B, The Crystal Structure Of Xmrv Protease Complexed With
Acetyl-Pepstatin
Length = 132
Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 69 PVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADR 103
P +TL +G +P F+ D H L QN +D+
Sbjct: 23 PRITLKVGGQPVTFLVDTGAQHSVLTQNPGPLSDK 57
>pdb|2H79|A Chain A, Crystal Structure Of Human Tr Alpha Bound T3 In
Orthorhombic Space Group
Length = 269
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNF------NILNFWPRL 231
LD + A+ ++LM D+ + KIE Q LLAF ++ NI +FWP+L
Sbjct: 170 LDDTEVALLQAVLLMS-TDRSGLLXVDKIEKSQEAYLLAFEHYVNHRKHNIPHFWPKL 226
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 13/92 (14%)
Query: 260 ARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTST 319
RK+ + E+ L +D L+ QL E+ L +E+V + L AG +TT
Sbjct: 204 GRKQAEPEDGL-----------LDELIARQL--EEGDLDHDEVVMIALVLLVAGHETTVN 250
Query: 320 ALQWIMANLVKHPHVQETVYTEIRGVVGENEE 351
A+ L++HP + + + V G EE
Sbjct: 251 AIALGALTLIQHPEQIDVLLRDPGAVSGVVEE 282
>pdb|2H77|A Chain A, Crystal Structure Of Human Tr Alpha Bound T3 In Monoclinic
Space Group
Length = 269
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNF------NILNFWPRL 231
LD + A+ ++LM D+ + KIE Q LLAF ++ NI +FWP+L
Sbjct: 170 LDDTEVALLQAVLLMS-TDRSGLLXVDKIEKSQEAYLLAFEHYVNHRKHNIPHFWPKL 226
>pdb|2ZSJ|A Chain A, Crystal Structure Of Threonine Synthase From Aquifex
Aeolicus Vf5
pdb|2ZSJ|B Chain B, Crystal Structure Of Threonine Synthase From Aquifex
Aeolicus Vf5
pdb|2ZSJ|C Chain C, Crystal Structure Of Threonine Synthase From Aquifex
Aeolicus Vf5
pdb|2ZSJ|D Chain D, Crystal Structure Of Threonine Synthase From Aquifex
Aeolicus Vf5
Length = 352
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 16/92 (17%)
Query: 47 QWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAI----------FIADRSLAHKALVQN 96
Q ++K + + P+ N P+VTL+ G P I F L ++ L
Sbjct: 5 QGIIKQYKKYLPVDENT-----PIVTLYEGNTPLIEADNLARAIGFKGKIYLKYEGLNPT 59
Query: 97 GAIFADRPRPLPTSKIVSSNQHNISSASYGTT 128
G+ F DR L SK V + + + AS G T
Sbjct: 60 GS-FKDRGMTLAISKAVEAGKRAVICASTGNT 90
>pdb|3FWG|A Chain A, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
pdb|3FWG|B Chain B, Ferric Camphor Bound Cytochrome P450cam, Arg365leu,
Glu366gln, Monoclinic Crystal Form
Length = 405
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 184 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 229
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 230 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 266
>pdb|3FWI|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Tetragonal
Crystal Form
pdb|3FWJ|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Orthorombic
Crystal Form
Length = 405
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 184 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 229
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 230 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 266
>pdb|3FWF|A Chain A, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Monoclinic
Crystal Form
pdb|3FWF|B Chain B, Ferric Camphor Bound Cytochrome P450cam Containing A
Selenocysteine As The 5th Heme Ligand, Monoclinic
Crystal Form
Length = 405
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 184 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 229
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 230 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 266
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 292 EEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEE 351
E+ +L+ EE++ + L AG +TT + M L+ HP + ++ + G EE
Sbjct: 243 EDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEE 302
Query: 352 GPKYRVPL 359
+Y P+
Sbjct: 303 MLRYEGPV 310
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 292 EEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEE 351
E+ +L+ EE++ + L AG +TT + M L+ HP + ++ + G EE
Sbjct: 243 EDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEE 302
Query: 352 GPKYRVPL 359
+Y P+
Sbjct: 303 MLRYEGPV 310
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 292 EEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEE 351
E+ +L+ EE++ + L AG +TT + M L+ HP + ++ + G EE
Sbjct: 243 EDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADMTLLDGAVEE 302
Query: 352 GPKYRVPL 359
+Y P+
Sbjct: 303 MLRYEGPV 310
>pdb|2LQD|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 405
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 184 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 229
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 230 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 266
>pdb|2FER|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
pdb|2FEU|B Chain B, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 411
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 184 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 229
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 230 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 266
>pdb|3JZC|A Chain A, Crystal Structure Of Tr-Beta Bound To The Selective
Thyromimetic Triac
Length = 263
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNF------NILNFWPRL-- 231
LD + A+ ++LM D+ + +++IE Q + LLAF ++ ++ +FWP+L
Sbjct: 167 LDDTEVALLQAVLLMS-SDRPGLAXVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLM 225
Query: 232 ----SKIVFVKKWEQFLQMRRDQENVLVP 256
+++ +FL M+ + L P
Sbjct: 226 KVTDLRMIGAXHASRFLHMKVECPTELFP 254
>pdb|1DZ8|A Chain A, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ8|B Chain B, Oxygen Complex Of P450cam From Pseudomonas Putida
pdb|1DZ6|A Chain A, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ6|B Chain B, Ferrous P450cam From Pseudomonas Putida
pdb|1DZ9|A Chain A, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ9|B Chain B, Putative Oxo Complex Of P450cam From Pseudomonas Putida
pdb|1DZ4|A Chain A, Ferric P450cam From Pseudomonas Putida
pdb|1DZ4|B Chain B, Ferric P450cam From Pseudomonas Putida
pdb|1O76|A Chain A, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1O76|B Chain B, Cyanide Complex Of P450cam From Pseudomonas Putida
pdb|1UYU|A Chain A, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1UYU|B Chain B, Xenon Complex Of Wildtype P450cam From Pseudomonas Putida
pdb|1AKD|A Chain A, Cytochrome P450cam From Pseudomonas Putida, Complexed With
1s-Camphor
Length = 414
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 193 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 238
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 239 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 275
>pdb|2FE6|A Chain A, P450cam From Pseudomonas Putida Reconstituted With
Manganic Protoporphyrin Ix
Length = 421
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|1GEK|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1GEM|A Chain A, Structural Characterization Of N-Butyl-Isocyanide
Complexes Of Cytochromes P450nor And P450cam
pdb|1IWI|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Cytochrome P450cam
pdb|2ZAW|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 6- Methyl-6-Depropionated Hemin
pdb|2ZAX|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2Z97|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
Reconstituted With 7- Methyl-7-Depropionated Hemin
pdb|2ZWT|A Chain A, Crystal Structure Of Ferric Cytochrome P450cam
pdb|2ZWU|A Chain A, Crystal Structure Of Camphor Soaked Ferric Cytochrome
P450cam
pdb|2L8M|A Chain A, Reduced And Co-Bound Cytochrome P450cam (Cyp101a1)
Length = 415
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|2ZUI|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297n)
Length = 415
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|1P2Y|A Chain A, Crystal Structure Of Cytochrome P450cam In Complex With
(S)- (-)-Nicotine
pdb|1P7R|A Chain A, Crystal Structure Of Reduced, Co-Exposed Complex Of
Cytochrome P450cam With (S)-(-)-Nicotine
Length = 420
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 193 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 238
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 239 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 275
>pdb|2ZUH|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant (D297a)
Length = 415
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|3GWS|X Chain X, Crystal Structure Of T3-Bound Thyroid Hormone Receptor
Length = 259
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNF------NILNFWPRL-- 231
LD + A+ ++LM D+ + +++IE Q + LLAF ++ ++ +FWP+L
Sbjct: 164 LDDTEVALLQAVLLMS-SDRPGLAXVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLM 222
Query: 232 ----SKIVFVKKWEQFLQMRRDQENVLVP 256
+++ +FL M+ + L P
Sbjct: 223 KVTDLRMIGAXHASRFLHMKVECPTELFP 251
>pdb|1RE9|A Chain A, Crystal Structure Of Cytochrome P450-cam With A
Fluorescent Probe D-8-ad (adamantane-1-carboxylic
Acid-5-dimethylamino-
Naphthalene-1-sulfonylamino-octyl-amide)
pdb|1YRC|A Chain A, X-ray Crystal Structure Of Hydrogenated Cytochrome P450cam
pdb|1YRD|A Chain A, X-Ray Crystal Structure Of Perdeuterated Cytochrome
P450cam
pdb|2H7Q|A Chain A, Cytochrome P450cam Complexed With Imidazole
pdb|1CP4|A Chain A, Formation, Crystal Structure, And Rearrangement Of A
Cytochrome P450-Cam Iron-Phenyl Complex
pdb|1NOO|A Chain A, Cytochrome P450-Cam Complexed With 5-Exo-Hydroxycamphor
pdb|1PHA|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHB|A Chain A, Inhibitor-Induced Conformational Change In Cytochrome
P450- Cam
pdb|1PHC|A Chain A, Crystal Structure Of Substrate-free Pseudomonas Putida
Cytochrome P450
pdb|1PHD|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHE|A Chain A, Crystal Structures Of Metyrapone-And
Phenylimidazole-Inhibited Complexes Of Cytochrome
P450-Cam
pdb|1PHF|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|1PHG|A Chain A, Crystal Structures Of Metyrapone-And Phenylimidazole-
Inhibited Complexes Of Cytochrome P450-Cam
pdb|2CPP|A Chain A, High-Resolution Crystal Structure Of Cytochrome P450-Cam
pdb|3CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|3CPP|A Chain A, Crystal Structure Of The Carbon
Monoxy-Substrate-Cytochrome P450-Cam Ternary Complex
pdb|4CP4|A Chain A, Crystal Structure Of The Cytochrome P450-Cam Active Site
Mutant Thr252ala
pdb|4CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|5CP4|A Chain A, Cryogenic Structure Of P450cam
pdb|5CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P-450(Cam)
pdb|6CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
pdb|7CPP|A Chain A, The Structural Basis For Substrate-Induced Changes In
Redox Potential And Spin Equilibrium In Cytochrome
P450(Cam)
pdb|8CPP|A Chain A, Crystal Structures Of Cytochrome P450-Cam Complexed With
Camphane, Thiocamphor, And Adamantane: Factors
Controlling P450 Substrate Hydroxylation
Length = 414
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 193 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 238
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 239 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 275
>pdb|2ZUJ|A Chain A, Crystal Structure Of Camphor-Soaked Ferric Cytochrome
P450cam Mutant(D297l)
Length = 415
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 193 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 238
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 239 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 275
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 193 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 238
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 239 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 275
>pdb|1IWJ|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(109k) Cytochrome P450cam
Length = 415
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|1IWK|A Chain A, Putidaredoxin-Binding Stablilizes An Active Conformer Of
Cytochrome P450cam In Its Reduced State; Crystal
Structure Of Mutant(112k) Cytochrome P450cam
Length = 415
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|1T85|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam Mutant (L358pC334A)
pdb|1T86|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
pdb|1T86|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam Mutant
(L358pC334A)
Length = 414
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 193 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 238
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 239 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 275
>pdb|1C8J|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
pdb|1C8J|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant (F87wY96F)
Length = 414
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 193 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 238
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 239 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 275
>pdb|1LWL|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-8-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Octyl-Amide)
pdb|1RF9|A Chain A, Crystal Structure Of Cytochrome P450-Cam With A
Fluorescent Probe D-4-Ad (Adamantane-1-Carboxylic
Acid-5-Dimethylamino-
Naphthalene-1-Sulfonylamino-Butyl-Amide)
Length = 417
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|3IMY|A Chain A, Structure Of Tr-Beta Bound To Selective Thyromimetic Gc-1
Length = 261
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 180 LDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNF------NILNFWPRL-- 231
LD + A+ ++LM D+ + +++IE Q + LLAF ++ ++ +FWP+L
Sbjct: 165 LDDTEVALLQAVLLMS-SDRPGLAXVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLM 223
Query: 232 ----SKIVFVKKWEQFLQMRRDQENVLVP 256
+++ +FL M+ + L P
Sbjct: 224 KVTDLRMIGAXHASRFLHMKVECPTELFP 252
>pdb|2QBL|A Chain A, Crystal Structure Of Ferric G248t Cytochrome P450cam
pdb|2QBM|A Chain A, Crystal Structure Of The P450cam G248t Mutant In The
Cyanide Bound State
Length = 421
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVTGLDTVVNFLSFSMEFLAKSPEHRQELI 276
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 273 KEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHP 332
+E+ ++ SYV L D + E ++ + ++ L NAG A W+M L+ HP
Sbjct: 232 REQSWLGSYVKQLQDEGIDAEMQRRAM--LLQLWVTQGNAGP-----AAFWVMGYLLTHP 284
Query: 333 HVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRI 370
V EI+G E + P+F + LR+
Sbjct: 285 EALRAVREEIQGGKHLRLEERQKNTPVFDSVLWETLRL 322
>pdb|2QBN|A Chain A, Crystal Structure Of Ferric G248v Cytochrome P450cam
pdb|2QBO|A Chain A, Crystal Structure Of The P450cam G248v Mutant In The
Cyanide Bound State
Length = 421
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 15/97 (15%)
Query: 243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEI 302
F + + + L+P+I R++ +++SI V R ++ +E
Sbjct: 194 FAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQV--------------NGRPITSDEA 239
Query: 303 VSLCSEFLNAGTDTTSTALQWIMANLVKHP-HVQETV 338
+C L G DT L + M L K P H QE +
Sbjct: 240 KRMCGLLLVVGLDTVVNFLSFSMEFLAKSPEHRQELI 276
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,609,670
Number of Sequences: 62578
Number of extensions: 467489
Number of successful extensions: 1312
Number of sequences better than 100.0: 133
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1167
Number of HSP's gapped (non-prelim): 155
length of query: 413
length of database: 14,973,337
effective HSP length: 101
effective length of query: 312
effective length of database: 8,652,959
effective search space: 2699723208
effective search space used: 2699723208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)