Query         040489
Match_columns 413
No_of_seqs    122 out of 1479
Neff          9.6 
Searched_HMMs 46136
Date          Fri Mar 29 08:58:29 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040489.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040489hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.9E-61 4.1E-66  472.2  35.6  365   31-413    25-397 (489)
  2 PLN02971 tryptophan N-hydroxyl 100.0   2E-55 4.3E-60  443.6  36.4  367   32-413    57-438 (543)
  3 PLN00168 Cytochrome P450; Prov 100.0 1.1E-52 2.4E-57  422.2  36.7  374   31-413    34-418 (519)
  4 PLN03234 cytochrome P450 83B1; 100.0   5E-52 1.1E-56  416.2  35.7  366   30-413    26-399 (499)
  5 PLN02183 ferulate 5-hydroxylas 100.0 3.6E-52 7.7E-57  418.2  34.2  368   30-413    34-414 (516)
  6 PLN00110 flavonoid 3',5'-hydro 100.0 8.6E-52 1.9E-56  413.6  35.4  385    9-412     9-399 (504)
  7 PLN02687 flavonoid 3'-monooxyg 100.0 8.6E-52 1.9E-56  415.6  35.4  389    7-413     8-408 (517)
  8 KOG0158 Cytochrome P450 CYP3/C 100.0   1E-51 2.2E-56  398.6  30.5  359   32-412    31-404 (499)
  9 PLN02966 cytochrome P450 83A1  100.0 8.1E-51 1.8E-55  407.3  36.3  365   32-413    29-402 (502)
 10 PLN03112 cytochrome P450 famil 100.0 1.6E-50 3.4E-55  406.7  36.6  364   32-412    32-406 (514)
 11 PLN02394 trans-cinnamate 4-mon 100.0   1E-49 2.2E-54  399.9  35.8  364   32-412    30-403 (503)
 12 PLN02290 cytokinin trans-hydro 100.0 3.1E-50 6.6E-55  404.8  29.5  360   32-412    42-424 (516)
 13 PLN03018 homomethionine N-hydr 100.0 2.2E-49 4.7E-54  397.5  35.3  394    5-412     8-424 (534)
 14 PTZ00404 cytochrome P450; Prov 100.0 9.1E-50   2E-54  398.2  32.5  383    2-413     2-395 (482)
 15 PLN02655 ent-kaurene oxidase   100.0 1.3E-49 2.8E-54  395.0  30.4  357   34-412     1-371 (466)
 16 PLN02500 cytochrome P450 90B1  100.0 4.5E-49 9.7E-54  393.7  30.7  347   31-413    37-394 (490)
 17 KOG0157 Cytochrome P450 CYP4/C 100.0 8.6E-50 1.9E-54  396.7  23.6  362   30-413    33-403 (497)
 18 PLN02169 fatty acid (omega-1)- 100.0 3.8E-48 8.3E-53  386.7  27.3  361   32-413    31-406 (500)
 19 KOG0159 Cytochrome P450 CYP11/ 100.0 4.5E-47 9.7E-52  358.7  27.9  356   32-407    50-422 (519)
 20 PF00067 p450:  Cytochrome P450 100.0   9E-48   2E-52  380.6  18.8  360   34-412     1-372 (463)
 21 PLN03195 fatty acid omega-hydr 100.0 1.3E-46 2.8E-51  378.3  27.0  362   32-413    30-423 (516)
 22 PLN02196 abscisic acid 8'-hydr 100.0 1.4E-45   3E-50  365.7  28.8  361    6-412     9-376 (463)
 23 PLN02774 brassinosteroid-6-oxi 100.0 2.2E-45 4.8E-50  364.4  28.6  340   32-413    31-377 (463)
 24 PLN02302 ent-kaurenoic acid ox 100.0 9.7E-45 2.1E-49  363.2  30.8  354   26-412    36-400 (490)
 25 PLN02936 epsilon-ring hydroxyl 100.0 5.2E-45 1.1E-49  363.8  28.7  363   32-413    12-388 (489)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 2.1E-44 4.5E-49  356.6  28.9  353   28-413     3-365 (452)
 27 PLN02738 carotene beta-ring hy 100.0 4.8E-44   1E-48  363.3  29.8  349   43-413   142-500 (633)
 28 PLN02987 Cytochrome P450, fami 100.0 8.4E-44 1.8E-48  352.5  29.9  365    6-412     6-379 (472)
 29 PLN02426 cytochrome P450, fami 100.0 4.5E-40 9.8E-45  328.3  27.4  343   39-413    48-405 (502)
 30 PLN02648 allene oxide synthase 100.0 2.1E-38 4.6E-43  312.4  18.7  344   32-411    17-386 (480)
 31 KOG0684 Cytochrome P450 [Secon 100.0 3.7E-32 8.1E-37  251.7  24.2  341   32-403    31-378 (486)
 32 COG2124 CypX Cytochrome P450 [ 100.0 1.8E-29   4E-34  245.6  24.0  274   58-384    26-305 (411)
 33 KOG0114 Predicted RNA-binding   62.9      25 0.00054   26.8   5.3   59   32-95     12-76  (124)
 34 PF12554 MOZART1:  Mitotic-spin  61.4      28  0.0006   22.5   4.6   43  301-343     6-48  (48)
 35 PF05952 ComX:  Bacillus compet  56.5      11 0.00023   25.4   2.2   24  324-347     5-28  (57)
 36 PRK11677 hypothetical protein;  49.4      17 0.00038   29.3   2.8   25    4-28      3-27  (134)
 37 PF14129 DUF4296:  Domain of un  43.6      93   0.002   22.8   5.8   50  298-347    30-79  (87)
 38 PF13893 RRM_5:  RNA recognitio  38.7      92   0.002   20.2   4.8   35   60-94      1-39  (56)
 39 PHA03049 IMV membrane protein;  36.8      73  0.0016   22.0   3.8   38   10-47      9-46  (68)
 40 COG3105 Uncharacterized protei  33.5      33 0.00072   27.1   2.0   28    2-29      6-33  (138)
 41 PF00076 RRM_1:  RNA recognitio  31.8 1.3E+02  0.0029   20.0   4.9   48   42-94      2-57  (70)
 42 PRK13467 F0F1 ATP synthase sub  31.0      67  0.0015   22.3   3.0   25  318-342    20-44  (66)
 43 PLN03120 nucleic acid binding   29.3 1.6E+02  0.0034   26.8   5.9   58   42-104     8-71  (260)
 44 PF15300 INT_SG_DDX_CT_C:  INTS  28.9      17 0.00038   25.1  -0.1   15  356-370    39-53  (65)
 45 TIGR01260 ATP_synt_c ATP synth  27.8      81  0.0018   21.3   2.9   25  318-342    10-34  (58)
 46 PRK13466 F0F1 ATP synthase sub  26.7      89  0.0019   21.8   3.0   25  318-342    20-44  (66)
 47 PF02468 PsbN:  Photosystem II   25.3      82  0.0018   19.8   2.4   22    1-22      1-22  (43)
 48 PF08675 RNA_bind:  RNA binding  24.7 1.8E+02  0.0039   21.4   4.3   39   57-95     22-61  (87)
 49 PRK05880 F0F1 ATP synthase sub  24.2      97  0.0021   22.6   3.0   25  318-342    29-53  (81)
 50 PF12273 RCR:  Chitin synthesis  23.5      58  0.0013   26.0   2.0   22    4-25      2-23  (130)
 51 PF05961 Chordopox_A13L:  Chord  23.4 1.6E+02  0.0034   20.5   3.6   27   10-36      9-35  (68)
 52 PF15018 InaF-motif:  TRP-inter  22.2 1.1E+02  0.0024   18.7   2.4   22    4-25     10-31  (38)
 53 PRK07558 F0F1 ATP synthase sub  21.9 1.2E+02  0.0026   21.7   3.0   24  318-341    26-49  (74)
 54 TIGR01661 ELAV_HUD_SF ELAV/HuD  21.5 1.8E+02   0.004   27.4   5.3   56   42-102   273-338 (352)
 55 PRK06876 F0F1 ATP synthase sub  21.2 1.3E+02  0.0028   21.8   3.1   25  318-342    28-52  (78)
 56 PLN03134 glycine-rich RNA-bind  20.4 2.4E+02  0.0052   23.0   5.0   49   42-95     38-95  (144)
 57 PF05393 Hum_adeno_E3A:  Human   20.2 1.6E+02  0.0035   21.6   3.4   18    2-19     34-51  (94)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.9e-61  Score=472.20  Aligned_cols=365  Identities=30%  Similarity=0.442  Sum_probs=304.4

Q ss_pred             CCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCc
Q 040489           31 TNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTS  110 (413)
Q Consensus        31 ~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~  110 (413)
                      .++||||++||++||++++...  .+|..+.+|.++|||+|.+|+|+.|+|+|+|+++++|+|++++..|.+|+......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            4899999999999999999643  58999999999999999999999999999999999999999999999998722233


Q ss_pred             ccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHH
Q 040489          111 KIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCL  190 (413)
Q Consensus       111 ~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~v  190 (413)
                      ..++.++.++.++.+|+.||.+||.....+++++.++++...+.++++.+++.+.+ ...+   ++||+.+.+..++.+|
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~---~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKG---EPVDLSELLDLLVGNV  178 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCC---ceeeHHHHHHHHHHHH
Confidence            55565567888877999999999999999999999999998889999999999987 2222   6899999999999999


Q ss_pred             HHHHHhcCCCCh---HHHHHHHHHHHHHHHHhcCCccccccc-ccchhhch-hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 040489          191 LVLMCFGDKLDE---SQIKKIENVQRTQLLAFGNFNILNFWP-RLSKIVFV-KKWEQFLQMRRDQENVLVPLIRARKKMK  265 (413)
Q Consensus       191 i~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~-~~~~~~~~~~~~~~~~i~~~i~~r~~~~  265 (413)
                      |++++||.++..   +...++...........+.+.+.+++| ++..+... ...++......++..++++.|+++++..
T Consensus       179 I~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  179 ICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999964   334457777777777777777778888 44433221 2233444444557889999998886654


Q ss_pred             hhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhh
Q 040489          266 EEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGV  345 (413)
Q Consensus       266 ~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v  345 (413)
                       +..      +. .|++|.||+...+++...+|+++|...|+++++||.||||+|+.|++.+|++||+||+|+++||+++
T Consensus       259 -~~~------~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~v  330 (489)
T KOG0156|consen  259 -GDE------EG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEV  330 (489)
T ss_pred             -ccC------CC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence             111      11 4899999987643232239999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          346 VGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       346 ~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      +|.+..   +|+.+||||+|||+||+|+||++|+.+||.+.+    +-.=.+++.+++|.|..+.|||-|+
T Consensus       331 vG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~----d~~i~Gy~IPkgT~v~vn~~ai~rD  397 (489)
T KOG0156|consen  331 VGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTE----DTKIGGYDIPKGTTVLVNLWAIHRD  397 (489)
T ss_pred             hCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccC----CeeEcCEEcCCCCEEEEeehhhhcC
Confidence            997752   999999999999999999999999999998876    2234679999999999999999874


No 2  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=2e-55  Score=443.64  Aligned_cols=367  Identities=20%  Similarity=0.272  Sum_probs=276.8

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcC-CeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCc
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLG-PVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTS  110 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~  110 (413)
                      ++||||+++|++||++++..+ ...+.++.+++++|| +|+++++|+.++|+++||++++++|++++..|.+|+... ..
T Consensus        57 ~lPPGP~~lPiiGnl~~l~~~-~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~-~~  134 (543)
T PLN02971         57 PLPPGPTGFPIVGMIPAMLKN-RPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTY-AQ  134 (543)
T ss_pred             CCCcCCCCCCcccchHHhccC-CcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCccc-ch
Confidence            689999999999999887532 235778999999999 899999999999999999999999999888898887533 33


Q ss_pred             ccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHH
Q 040489          111 KIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCL  190 (413)
Q Consensus       111 ~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~v  190 (413)
                      .+++.+..++.+..+|+.|+++||.+.++++++..++.+.+.++++++.+++.+.+....+   .++|+.+.+..+++|+
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~vd~~~~~~~~t~~v  211 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNS---EPVDLRFVTRHYCGNA  211 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCC---CceehHHHHHHHHHHH
Confidence            4444332334455689999999999887888887888888888888888988887654433   5799999999999999


Q ss_pred             HHHHHhcCCCCh-------HHHHHHHHHHHHHHHHh---cCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHH
Q 040489          191 LVLMCFGDKLDE-------SQIKKIENVQRTQLLAF---GNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRA  260 (413)
Q Consensus       191 i~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~  260 (413)
                      |++++||.++..       .............+...   ....+.+++|++..+.+.+.++...+..+.+.+++.+++++
T Consensus       212 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  291 (543)
T PLN02971        212 IKRLMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDE  291 (543)
T ss_pred             HHHHHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999987621       01111111112211111   11223456666544322122333444556677788888887


Q ss_pred             HHHhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHH
Q 040489          261 RKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYT  340 (413)
Q Consensus       261 r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~e  340 (413)
                      +++....+.    + ....|+++.|++...+++...+++++|.+++.++++||+||||++++|++++|++||++|+|+++
T Consensus       292 ~~~~~~~~~----~-~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~  366 (543)
T PLN02971        292 RIKMWREGK----R-TQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAME  366 (543)
T ss_pred             HHHHHhccC----C-CCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            765331110    0 11248999999864321223599999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhh-hhhhccccccccccccccccceeeeeeecC
Q 040489          341 EIRGVVGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVR-AIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       341 Ei~~v~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      ||++++|++..   +++++|||++|||+||||+|||+|+.+||.+. ++.     -.+++.+++++|..+.|++-|+
T Consensus       367 EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~-----~~G~~IpkGt~v~~~~~~~~~d  438 (543)
T PLN02971        367 EIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTT-----VAGYHIPKGSQVLLSRYGLGRN  438 (543)
T ss_pred             HHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCee-----ECCEEECCCCEEEECcHHhcCC
Confidence            99999986432   88999999999999999999999998888764 444     3578999999999999998774


No 3  
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.1e-52  Score=422.19  Aligned_cols=374  Identities=43%  Similarity=0.767  Sum_probs=282.0

Q ss_pred             CCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCc
Q 040489           31 TNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTS  110 (413)
Q Consensus        31 ~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~  110 (413)
                      .++||||+++|++||++.+.....+++.++.+++++||++|++++|+.|+|+++||+++++++++++..|.+|+... ..
T Consensus        34 ~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~-~~  112 (519)
T PLN00168         34 RRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA-SS  112 (519)
T ss_pred             CCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc-ch
Confidence            46899999999999998664333457889999999999999999999999999999999999998888888876532 22


Q ss_pred             ccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHH
Q 040489          111 KIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCL  190 (413)
Q Consensus       111 ~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~v  190 (413)
                      .+++.+...+.+..+|+.|+++||.+.+++|+++++++|.+.+.++++.+++.|.+....+   ..+|+.+.++.+++++
T Consensus       113 ~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~---~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        113 RLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDA---AAPRVVETFQYAMFCL  189 (519)
T ss_pred             hhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCcCHHHHHHHHHHHH
Confidence            3344322233333679999999987777999999999999999999999999998654332   4688999999999999


Q ss_pred             HHHHHhcCCCChHHHHHHHHHHHHHHHHhc-CCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--
Q 040489          191 LVLMCFGDKLDESQIKKIENVQRTQLLAFG-NFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEE--  267 (413)
Q Consensus       191 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~--  267 (413)
                      ++.++||.++++.....+............ ...+..++|.+.+......+++..+..+.+.+++.++++++++....  
T Consensus       190 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  269 (519)
T PLN00168        190 LVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLG  269 (519)
T ss_pred             HHHHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            999999998864432233232222221111 12233556654332222334555566778888888888877653210  


Q ss_pred             h-h-hhhhhhhhhhhHHHHHHhccCC-cccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHh
Q 040489          268 E-S-LSIKEREYVLSYVDTLLDLQLP-EEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRG  344 (413)
Q Consensus       268 ~-~-~~~~~~~~~~~~ld~ll~~~~~-~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~  344 (413)
                      . + ..........|+++.|++...+ +++..+|+++|++++.++++||+||||++++|++++|++||++|+|+++||++
T Consensus       270 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~  349 (519)
T PLN00168        270 QGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKA  349 (519)
T ss_pred             ccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence            0 0 0000000134899999975432 23356999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCC---C-CCCCCChhHHHhhhccccccCCCCCCCcchh-hhhhhccccccccccccccccceeeeeeecC
Q 040489          345 VVGENE---E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECV-RAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       345 v~g~~~---~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      ++|++.   . +++++||||+|||+||||+|||+|+.++|.+ .++.+     .+.+.+++++|..+.+++-|+
T Consensus       350 v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~-----~g~~IpkGt~v~~~~~~~~~d  418 (519)
T PLN00168        350 KTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEV-----GGYLIPKGATVNFMVAEMGRD  418 (519)
T ss_pred             HhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccC-----CCEEECCCCEEEEChHHHhcC
Confidence            998532   2 8899999999999999999999999888766 45554     578999999999998887664


No 4  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=5e-52  Score=416.24  Aligned_cols=366  Identities=19%  Similarity=0.309  Sum_probs=275.5

Q ss_pred             CCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCC
Q 040489           30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPT  109 (413)
Q Consensus        30 ~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~  109 (413)
                      ..+.||||+++|++||++++..  .+++.++.+++++||++|++++|+.++|+++||+++++|+.+++..|.+++.....
T Consensus        26 ~~~~pPgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~  103 (499)
T PLN03234         26 SLRLPPGPKGLPIIGNLHQMEK--FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ  103 (499)
T ss_pred             CCCCCcCCCCCCeeccHHhcCC--CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            3478999999999999988742  24677899999999999999999999999999999999999887788877643211


Q ss_pred             cccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHH
Q 040489          110 SKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFC  189 (413)
Q Consensus       110 ~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~  189 (413)
                       ..+...+..+.+...|+.|+++||.+..++|++++++++.+.++++++.+++.|......+   .++|+.+.+..+++|
T Consensus       104 -~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~---~~vd~~~~~~~~t~d  179 (499)
T PLN03234        104 -QTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQS---GTVDLSELLLSFTNC  179 (499)
T ss_pred             -hhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCC---CeEEHHHHHHHHHHH
Confidence             1111111222233467899999998666899999999999999999999999997654433   579999999999999


Q ss_pred             HHHHHHhcCCCChH--HHHHHHHHHHHHHHHhcCCcccccccccchhh-chhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 040489          190 LLVLMCFGDKLDES--QIKKIENVQRTQLLAFGNFNILNFWPRLSKIV-FVKKWEQFLQMRRDQENVLVPLIRARKKMKE  266 (413)
Q Consensus       190 vi~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~  266 (413)
                      ++++++||.+++..  ....+..........+........+|++.... +.+.+++..++.+.+.+++.++++++++...
T Consensus       180 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  259 (499)
T PLN03234        180 VVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNR  259 (499)
T ss_pred             HHHHHHhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence            99999999987532  22233332222222222222233444432111 1223455667778888888888887654321


Q ss_pred             hhhhhhhhhhhhhhHHHHHHhccCCcc-cCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhh
Q 040489          267 EESLSIKEREYVLSYVDTLLDLQLPEE-KRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGV  345 (413)
Q Consensus       267 ~~~~~~~~~~~~~~~ld~ll~~~~~~~-~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v  345 (413)
                      .+       +...|+++.|++...+++ +..+++++|++++.++++||+||||++++|++|+|++||++|+|+++|++++
T Consensus       260 ~~-------~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~  332 (499)
T PLN03234        260 PK-------QETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNV  332 (499)
T ss_pred             cC-------CCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            00       112378898887543212 2368999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhh-hhhhccccccccccccccccceeeeeeecC
Q 040489          346 VGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVR-AIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       346 ~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      +|+...   +++.+|||++|||+|+||+|||+|+.++|.+. ++.+     .+...++|++|..+.+++-|+
T Consensus       333 ~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~-----~g~~IP~Gt~v~~~~~~~~rd  399 (499)
T PLN03234        333 IGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKI-----GGYDIPAKTIIQVNAWAVSRD  399 (499)
T ss_pred             hCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeE-----CCEEECCCCEEEEehHhhhCC
Confidence            986432   88999999999999999999999998777664 4443     468899999999999888764


No 5  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=3.6e-52  Score=418.24  Aligned_cols=368  Identities=22%  Similarity=0.333  Sum_probs=273.1

Q ss_pred             CCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCC
Q 040489           30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPT  109 (413)
Q Consensus        30 ~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~  109 (413)
                      +.++||||+++|++||++++.   ...+.++.+++++||++|++++|+.++|+++||+++++|+.+++..|.+++.....
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~  110 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMMD---QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI  110 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhcC---CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence            347899999999999998763   23567899999999999999999999999999999999999887778877643221


Q ss_pred             cccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHH
Q 040489          110 SKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFC  189 (413)
Q Consensus       110 ~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~  189 (413)
                      ..+.+. ..+..+..+|+.|+++||.+..++|+...++.+.+.. ++++.+++.|...  .|   .++|+.+++..+++|
T Consensus       111 ~~~~~~-~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~--~~---~~v~~~~~~~~~~~~  183 (516)
T PLN02183        111 SYLTYD-RADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN--IG---KPVNIGELIFTLTRN  183 (516)
T ss_pred             hccccC-CCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc--CC---CcEeHHHHHHHHHHH
Confidence            222221 1223345689999999998666899999999998865 5678888888642  23   679999999999999


Q ss_pred             HHHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 040489          190 LLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEES  269 (413)
Q Consensus       190 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~~~  269 (413)
                      ++++++||.+.+... ..+.+........+..+....++|++..+.....+++..+..+.+.+++.++++++++......
T Consensus       184 vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  262 (516)
T PLN02183        184 ITYRAAFGSSSNEGQ-DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQN  262 (516)
T ss_pred             HHHhHhhcCcccchH-HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            999999998775321 2333333333332222233345565433212222445555666777888888877654331110


Q ss_pred             hhhhhhhhhhhHHHHHHhccCCc----------ccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHH
Q 040489          270 LSIKEREYVLSYVDTLLDLQLPE----------EKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVY  339 (413)
Q Consensus       270 ~~~~~~~~~~~~ld~ll~~~~~~----------~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~  339 (413)
                      ....++....|+++.+++...++          ++..++++++.+++.++++||+||||++++|++|+|++||++|+|++
T Consensus       263 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~  342 (516)
T PLN02183        263 ADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQ  342 (516)
T ss_pred             cccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHH
Confidence            00000012348999999754221          12358999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          340 TEIRGVVGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       340 eEi~~v~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      +|+++++|.+..   +++.+||||+|||+||||+|||+|+..+++..++.+     .+++.+++++|..+.+++-|+
T Consensus       343 ~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l-----~g~~IPkGt~V~~~~~~~hrd  414 (516)
T PLN02183        343 QELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEV-----AGYFIPKRSRVMINAWAIGRD  414 (516)
T ss_pred             HHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeE-----CCEEECCCCEEEEehhhhcCC
Confidence            999999984332   889999999999999999999999987666666554     468999999999999998774


No 6  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=8.6e-52  Score=413.57  Aligned_cols=385  Identities=21%  Similarity=0.358  Sum_probs=284.5

Q ss_pred             HHHHHHHHHHHhhhhhcCCCCCCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHH
Q 040489            9 ISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSL   88 (413)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~   88 (413)
                      +..++..+.++++.++.++. ..++||||+++|++||++.+.   ...+.++.+++++||+||++++|++++|+++||++
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~-~~~~pPgp~~~Pl~G~l~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~   84 (504)
T PLN00110          9 AATLLFFITRFFIRSLLPKP-SRKLPPGPRGWPLLGALPLLG---NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEA   84 (504)
T ss_pred             HHHHHHHHHHHHHHHHhhcc-cCCCcccCCCCCeeechhhcC---CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHH
Confidence            34455566677777776444 458999999999999987763   34688999999999999999999999999999999


Q ss_pred             HHHHHHhcCcccccCCCCCCCcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhc
Q 040489           89 AHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSES  168 (413)
Q Consensus        89 i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~  168 (413)
                      ++++|++++..|.+++...........++.++ +..+|+.|+++||.+.++.|++++++.+.+.+.++++.+++.|.+..
T Consensus        85 ~~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~l-~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~  163 (504)
T PLN00110         85 ARAFLKTLDINFSNRPPNAGATHLAYGAQDMV-FADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELS  163 (504)
T ss_pred             HHHHHHhcchhhcCCCCccchhhhccCCCcee-eCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence            99999988778888764321111111112233 45679999999999876689999999999998888888999887654


Q ss_pred             cCCCCCcccchHHHHHHHHHHHHHHHHhcCCC-C--hHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHH
Q 040489          169 KNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKL-D--ESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQ  245 (413)
Q Consensus       169 ~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~  245 (413)
                      ..|   .++|+.+++..+++|+|++++||.++ .  +.....+...............+.+++|++.++......++..+
T Consensus       164 ~~g---~~~~~~~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~  240 (504)
T PLN00110        164 QRG---EPVVVPEMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKH  240 (504)
T ss_pred             cCC---CcEeHHHHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHH
Confidence            444   67999999999999999999999876 1  11122333333333222222223345565432211112233444


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHH
Q 040489          246 MRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIM  325 (413)
Q Consensus       246 ~~~~~~~~i~~~i~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~  325 (413)
                      ..+.+.+++.++++++++.....       ....|+++.+++....+++..++++++.++++++++||+||||++++|++
T Consensus       241 ~~~~~~~~~~~~i~~~~~~~~~~-------~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l  313 (504)
T PLN00110        241 LHKKFDKLLTRMIEEHTASAHER-------KGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSL  313 (504)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccc-------ccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHH
Confidence            45666777777777665432100       11238999999754322345699999999999999999999999999999


Q ss_pred             HHHhhChHHHHHHHHHHHhhhcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccc
Q 040489          326 ANLVKHPHVQETVYTEIRGVVGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTV  402 (413)
Q Consensus       326 ~~La~~P~vq~Kl~eEi~~v~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~  402 (413)
                      ++|++||++|+|+++|+++++|++..   +++++|||++|||+||||+|||+|+.++|.+.+    +-.-.+++.+++++
T Consensus       314 ~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~----d~~~~g~~Ip~Gt~  389 (504)
T PLN00110        314 AEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQ----ACEVNGYYIPKNTR  389 (504)
T ss_pred             HHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCC----CeeeCCEEECCCCE
Confidence            99999999999999999999986432   889999999999999999999999988887743    22335688889999


Q ss_pred             cceeeeeeec
Q 040489          403 VEATYINIVR  412 (413)
Q Consensus       403 ~~~~~~~~~~  412 (413)
                      |.-+.+++-|
T Consensus       390 V~~~~~~~h~  399 (504)
T PLN00110        390 LSVNIWAIGR  399 (504)
T ss_pred             EEEeHHHhcC
Confidence            8888777655


No 7  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=8.6e-52  Score=415.56  Aligned_cols=389  Identities=22%  Similarity=0.337  Sum_probs=284.8

Q ss_pred             HHHHHHHHHHHHHhhhhhcCCC-CCCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeC
Q 040489            7 ILISISIAALLKAFISVIISPK-YKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIAD   85 (413)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~d   85 (413)
                      +++.++++++.-+++++..+.+ ...++||||+++|++||++++.   .+++.++.+++++||++|++++|+.++|+++|
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~~---~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~   84 (517)
T PLN02687          8 LLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLG---PKPHHTMAALAKTYGPLFRLRFGFVDVVVAAS   84 (517)
T ss_pred             HHHHHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhcC---CchhHHHHHHHHHhCCeeEEecCCceEEEeCC
Confidence            3344443333333333333332 2235789999999999998774   34788999999999999999999999999999


Q ss_pred             hHHHHHHHHhcCcccccCCCCCCCcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHH
Q 040489           86 RSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLK  165 (413)
Q Consensus        86 pe~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~  165 (413)
                      |++++++|+++...|.+++..... ..+...+.+..+..+|+.|+++||.+.+++|+++++++|.+.++++++.+++.|.
T Consensus        85 p~~~~~il~~~~~~f~~r~~~~~~-~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~  163 (517)
T PLN02687         85 ASVAAQFLRTHDANFSNRPPNSGA-EHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELA  163 (517)
T ss_pred             HHHHHHHHHhcchhhhcCCCccch-hhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHH
Confidence            999999999887788887643321 2222222234455679999999999876789999999999999999999999997


Q ss_pred             hhccCCCCCcccchHHHHHHHHHHHHHHHHhcCCCCh----HHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHH
Q 040489          166 SESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE----SQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWE  241 (413)
Q Consensus       166 ~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~  241 (413)
                      .... +   .++|+.+.+..+++|+|+.++||.++..    .....+...............+.+++|++.++.....++
T Consensus       164 ~~~~-~---~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~  239 (517)
T PLN02687        164 RQHG-T---APVNLGQLVNVCTTNALGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVG  239 (517)
T ss_pred             HhcC-C---CceeHHHHHHHHHHHHHHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHH
Confidence            6432 2   5799999999999999999999988621    122334343333333222222224455443221211233


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCc----ccCCCCHHHHHHHHHHHhhcccccH
Q 040489          242 QFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPE----EKRKLSEEEIVSLCSEFLNAGTDTT  317 (413)
Q Consensus       242 ~~~~~~~~~~~~i~~~i~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~----~~~~lt~~ei~~~~~~~l~AG~dTT  317 (413)
                      +..+..+.+.+++.++++++++.....      ++...|+++.+++...++    ++..++++++.+++.++++||+|||
T Consensus       240 ~~~~~~~~~~~~~~~~i~~r~~~~~~~------~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTt  313 (517)
T PLN02687        240 KMKRLHRRFDAMMNGIIEEHKAAGQTG------SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTT  313 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccc------CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCch
Confidence            444556667778888888776543110      011238999999864321    2346999999999999999999999


Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHHHhhhcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccc
Q 040489          318 STALQWIMANLVKHPHVQETVYTEIRGVVGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKE  394 (413)
Q Consensus       318 a~tl~w~~~~La~~P~vq~Kl~eEi~~v~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~  394 (413)
                      |++++|++|+|++||++|+|+++|++++++++..   +++.+||||+|||+||||+|||+|..++|.+.+    +-.-.+
T Consensus       314 a~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~----d~~~~g  389 (517)
T PLN02687        314 SSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAE----ECEING  389 (517)
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCC----CeeECC
Confidence            9999999999999999999999999999985432   889999999999999999999999988887653    223356


Q ss_pred             cccccccccceeeeeeecC
Q 040489          395 SFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~  413 (413)
                      ...+++++|..+.+++-|+
T Consensus       390 ~~ip~Gt~v~~~~~~~h~d  408 (517)
T PLN02687        390 YHIPKGATLLVNVWAIARD  408 (517)
T ss_pred             EEECCCCEEEEecHHhcCC
Confidence            8888999998888877653


No 8  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1e-51  Score=398.55  Aligned_cols=359  Identities=23%  Similarity=0.331  Sum_probs=259.2

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcc
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSK  111 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~  111 (413)
                      +-+|||+++|++||+..+...... ..+..+.+.++|+++.++.|.+|.++|+|||++|+|++++.++|.+|........
T Consensus        31 rGi~~~~p~p~~Gn~~~~~~~~~~-~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~  109 (499)
T KOG0158|consen   31 RGIPGPKPLPFLGNLPGMLKRERP-GDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDP  109 (499)
T ss_pred             CCCCCCCCCCcEecHHHHHhccCc-HHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCC
Confidence            579999999999999998864433 4555555555699999999999999999999999999999999999542111111


Q ss_pred             cccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHH
Q 040489          112 IVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLL  191 (413)
Q Consensus       112 ~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi  191 (413)
                      --.....++ +...|+.||++|..+ +|.|++.+++++.+.++++++++++++++....+   ..+++.+.+..+|.|||
T Consensus       110 ~~~l~~~~L-f~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~---~~~~~~dl~~~yT~DVI  184 (499)
T KOG0158|consen  110 EDPLSALNL-FFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGG---QEGEIKDLCARYTTDVI  184 (499)
T ss_pred             CCcccccCc-hhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhccc---CCccHHHHHHHHHHHHH
Confidence            000011234 346899999999986 4899999999999999999999999999865432   46788899999999999


Q ss_pred             HHHHhcCCCChHH--HHHHHHHHHHHHHH-hcCCc----ccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040489          192 VLMCFGDKLDESQ--IKKIENVQRTQLLA-FGNFN----ILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKM  264 (413)
Q Consensus       192 ~~~~fG~~~~~~~--~~~~~~~~~~~~~~-~~~~~----~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~  264 (413)
                      ++++||.+.+...  ..++....+..... ...+.    ....+|.+...+.      .........++..++++++.+.
T Consensus       185 ~~~AfG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~------~~~~~~~~~~~~~~~v~~~v~~  258 (499)
T KOG0158|consen  185 GSCAFGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLR------VKLFPEDVTDFFRKLVNSRVEQ  258 (499)
T ss_pred             hHhhcccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhh------cccChHHHHHHHHHHHHHHHHH
Confidence            9999999864211  11222111111111 11111    1122232222110      0111122333344444433322


Q ss_pred             hhhhhhhhhhhhhhhhHHHHHHhccCC---cc--cCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHH
Q 040489          265 KEEESLSIKEREYVLSYVDTLLDLQLP---EE--KRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVY  339 (413)
Q Consensus       265 ~~~~~~~~~~~~~~~~~ld~ll~~~~~---~~--~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~  339 (413)
                      ...+      +..+.|++|.+++++.+   ..  .+.+|.+||+++|+.|++||+||||+||++++|+||+|||+|+|||
T Consensus       259 R~~~------~~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLr  332 (499)
T KOG0158|consen  259 REKE------NIERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLR  332 (499)
T ss_pred             HHhc------CCCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHH
Confidence            2111      12345999999987632   11  1259999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCC-C--CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeec
Q 040489          340 TEIRGVVGENE-E--GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVR  412 (413)
Q Consensus       340 eEi~~v~g~~~-~--~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (413)
                      |||++++.... .  |.+.+||||++||+||||+|||+|..-++|+++...-.    +....+|+.|....|||-|
T Consensus       333 eEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~----~~~i~kG~~V~Ip~~alH~  404 (499)
T KOG0158|consen  333 EEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPG----GFVIPKGTPVMIPTYALHH  404 (499)
T ss_pred             HHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCC----CeEeCCCCEEEeecccccC
Confidence            99999976544 3  88999999999999999999999998888888755544    7888899999888888754


No 9  
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=8.1e-51  Score=407.27  Aligned_cols=365  Identities=21%  Similarity=0.324  Sum_probs=267.7

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcc
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSK  111 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~  111 (413)
                      ++||||+++|++||++++..  .+++..+.+++++||++|++++|+.++|+++||+++++|+.+++..|.+++... ...
T Consensus        29 ~~ppgp~~~p~~G~l~~l~~--~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~-~~~  105 (502)
T PLN02966         29 KLPPGPSPLPVIGNLLQLQK--LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHR-GHE  105 (502)
T ss_pred             CCCcCCCCCCeeccHHhcCC--CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc-cce
Confidence            78999999999999988742  357889999999999999999999999999999999999988777777664321 112


Q ss_pred             cccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHH
Q 040489          112 IVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLL  191 (413)
Q Consensus       112 ~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi  191 (413)
                      .+..+...+.+..+|+.|+++||.+..++|+++.++.+.+.+++.++.+++.|.+....+   .++|+.+.+..+++|+|
T Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~---~~vdl~~~~~~~t~dvi  182 (502)
T PLN02966        106 FISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKS---EVVDISELMLTFTNSVV  182 (502)
T ss_pred             eeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCC---CceeHHHHHHHHHHHHH
Confidence            222222233344579999999998667899999999999999999999999997654433   57999999999999999


Q ss_pred             HHHHhcCCCCh--HHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 040489          192 VLMCFGDKLDE--SQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKW-EQFLQMRRDQENVLVPLIRARKKMKEEE  268 (413)
Q Consensus       192 ~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~-~~~~~~~~~~~~~i~~~i~~r~~~~~~~  268 (413)
                      +.++||.+++.  +....+..........+.......++|++..+.....+ +......+...+++.++++++.+... .
T Consensus       183 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~  261 (502)
T PLN02966        183 CRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKR-V  261 (502)
T ss_pred             HHHHhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhccc-c
Confidence            99999998743  22222323222222222222223444532111100111 11122334455666666665433210 0


Q ss_pred             hhhhhhhhhhhhHHHHHHhccCCcc-cCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhc
Q 040489          269 SLSIKEREYVLSYVDTLLDLQLPEE-KRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG  347 (413)
Q Consensus       269 ~~~~~~~~~~~~~ld~ll~~~~~~~-~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g  347 (413)
                      .      ....++++.++++..++. +..++++++.++++++++||+||||++++|++|+|++||++|+|+++||+++++
T Consensus       262 ~------~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~  335 (502)
T PLN02966        262 K------PETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMK  335 (502)
T ss_pred             c------cccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhc
Confidence            0      112378899887543221 345899999999999999999999999999999999999999999999999997


Q ss_pred             CC---C-C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          348 EN---E-E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       348 ~~---~-~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      +.   . . +++++|||++|||+||||+|||+|+.++|.+.+    +-..++.+.++++.|..+.|++-|+
T Consensus       336 ~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~----d~~l~g~~IP~Gt~V~~~~~~~~rd  402 (502)
T PLN02966        336 EKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQ----DTKIAGYDIPAGTTVNVNAWAVSRD  402 (502)
T ss_pred             ccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCcccCC----CeeEccEEECCCCEEEEecccccCC
Confidence            42   1 2 889999999999999999999999987777643    2223578999999999999988763


No 10 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=1.6e-50  Score=406.71  Aligned_cols=364  Identities=21%  Similarity=0.316  Sum_probs=271.3

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcc
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSK  111 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~  111 (413)
                      +.||||+++|++||+.++.   ..++.++.++++|||++|++++|++++|+++||+++++|+.+++..|.+++.......
T Consensus        32 ~~ppgp~~~pl~G~~~~~~---~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~  108 (514)
T PLN03112         32 RLPPGPPRWPIVGNLLQLG---PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVH  108 (514)
T ss_pred             CCccCCCCCCeeeeHHhcC---CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCccccee
Confidence            6889999999999998774   3468889999999999999999999999999999999999888888887764321111


Q ss_pred             -cccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHH
Q 040489          112 -IVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCL  190 (413)
Q Consensus       112 -~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~v  190 (413)
                       .++.  ....+..+|+.|+++||.+..++|+++.++.+.+.+.++++.+++.+......+   .++|+.+.+..+++++
T Consensus       109 ~~~g~--~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~---~~vd~~~~~~~~~~~v  183 (514)
T PLN03112        109 LAYGC--GDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTG---KPVNLREVLGAFSMNN  183 (514)
T ss_pred             eccCC--CceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccC---CeeeHHHHHHHHHHHH
Confidence             2222  223344689999999999777789999999999999999999998876543333   5799999999999999


Q ss_pred             HHHHHhcCCCCh------HHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040489          191 LVLMCFGDKLDE------SQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKM  264 (413)
Q Consensus       191 i~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~  264 (413)
                      +++++||.++..      +....+.+................++|.+..+.....+++..+..+.+.+++.++++++++.
T Consensus       184 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  263 (514)
T PLN03112        184 VTRMLLGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRA  263 (514)
T ss_pred             HHHHHcCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999988621      11223333333222222111223345544322111223444556667777888888776554


Q ss_pred             hhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHh
Q 040489          265 KEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRG  344 (413)
Q Consensus       265 ~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~  344 (413)
                      .....    ......|+++.++++..++++..+++++|.+++.++++||+||||++++|++|+|++||++|+|+++||++
T Consensus       264 ~~~~~----~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~  339 (514)
T PLN03112        264 RSGKL----PGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDS  339 (514)
T ss_pred             hcccc----cCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            31111    00112489999998643323345999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhh-hhhhccccccccccccccccceeeeeeec
Q 040489          345 VVGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVR-AIWYSEKEDKESFWNKSTVVEATYINIVR  412 (413)
Q Consensus       345 v~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (413)
                      ++|+...   +++.+|||++|||+||||+|||+|+.++|.+. ++.     -.+...++++.|.-+.+++-|
T Consensus       340 ~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~-----i~g~~IPkGt~v~~~~~~~h~  406 (514)
T PLN03112        340 VVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATT-----INGYYIPAKTRVFINTHGLGR  406 (514)
T ss_pred             hcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCee-----EcCEEeCCCCEEEEehHHhhC
Confidence            9986432   88999999999999999999999998777664 333     346788888888877776654


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1e-49  Score=399.90  Aligned_cols=364  Identities=19%  Similarity=0.322  Sum_probs=261.8

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcc
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSK  111 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~  111 (413)
                      +.||||+++|++|+++++..  ...+..+.+++++||++|++++|++++|+++||+.+++++.+++..|.+++.......
T Consensus        30 ~~pPgp~~~p~~g~l~~~~~--~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~~  107 (503)
T PLN02394         30 KLPPGPAAVPIFGNWLQVGD--DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDI  107 (503)
T ss_pred             CCCcCCCCCCeeeeHHhcCC--CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHhH
Confidence            68999999999999987642  2357889999999999999999999999999999999999887777877654322222


Q ss_pred             cccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHH
Q 040489          112 IVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLL  191 (413)
Q Consensus       112 ~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi  191 (413)
                      +.+. +.+..+..+|+.|+++||.+..++|+++.++.+.+.++++++.+++.|....+.+  +..+|+.+.++.+++|++
T Consensus       108 ~~g~-~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~--~~~v~~~~~~~~~~~dvi  184 (503)
T PLN02394        108 FTGK-GQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAA--TEGVVIRRRLQLMMYNIM  184 (503)
T ss_pred             hccC-CCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhcc--CCcEecHHHHHHHHHHHH
Confidence            2222 2233345689999999998877899999999999999999999999997653221  145899999999999999


Q ss_pred             HHHHhcCCCChH---HHHHHHHHHHHHHHHhcC--CcccccccccchhhchhHHHHHHHHHHH-HHHHHHHHHHHHHHhh
Q 040489          192 VLMCFGDKLDES---QIKKIENVQRTQLLAFGN--FNILNFWPRLSKIVFVKKWEQFLQMRRD-QENVLVPLIRARKKMK  265 (413)
Q Consensus       192 ~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~-~~~~i~~~i~~r~~~~  265 (413)
                      ++++||.+++..   ....+.............  ..+..++|++.+.. ....+........ ...+...+++++++..
T Consensus       185 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  263 (503)
T PLN02394        185 YRMMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFL-RGYLKICQDVKERRLALFKDYFVDERKKLM  263 (503)
T ss_pred             HHHHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999987431   112222221111111111  11223344433211 1111111111111 1223334555554332


Q ss_pred             hhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhh
Q 040489          266 EEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGV  345 (413)
Q Consensus       266 ~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v  345 (413)
                      ....   .+.+...|+++.|+++..   ++.++++++..++.++++||+||||+|++|++|+|++||++|+||++||+++
T Consensus       264 ~~~~---~~~~~~~d~l~~ll~~~~---~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v  337 (503)
T PLN02394        264 SAKG---MDKEGLKCAIDHILEAQK---KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTV  337 (503)
T ss_pred             hhcc---CCcchhhhHHHHHHhccc---cCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            1110   001123489999998653   2358999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhh-hhhhccccccccccccccccceeeeeeec
Q 040489          346 VGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVR-AIWYSEKEDKESFWNKSTVVEATYINIVR  412 (413)
Q Consensus       346 ~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (413)
                      +|++..   +++++||||+|||+||||+|||+|+..+|.+. +.++     .+++.++++.|..+.+++-|
T Consensus       338 ~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i-----~g~~IP~Gt~V~~~~~~~~r  403 (503)
T PLN02394        338 LGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKL-----GGYDIPAESKILVNAWWLAN  403 (503)
T ss_pred             hCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCccc-----CCEEeCCCCEEEEchHHHhC
Confidence            985432   78899999999999999999999999888765 4444     47999999999888887765


No 12 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=3.1e-50  Score=404.81  Aligned_cols=360  Identities=16%  Similarity=0.214  Sum_probs=260.6

Q ss_pred             CCCCCCCcccccccchhhhhc----------------cCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHh
Q 040489           32 NLPPGPFNLPVIGNLQWLLKS----------------FSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQ   95 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~----------------~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~   95 (413)
                      +.||||+++|++||++++...                .......+.+|+++||++|++++|+.++|+++||+++++++++
T Consensus        42 ~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~~  121 (516)
T PLN02290         42 QGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLTK  121 (516)
T ss_pred             cCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHhc
Confidence            579999999999999887531                0223345788999999999999999999999999999999987


Q ss_pred             cCcccccCCCCCC--CcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCC
Q 040489           96 NGAIFADRPRPLP--TSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDR  173 (413)
Q Consensus        96 ~~~~f~~r~~~~~--~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~  173 (413)
                      +. .+.+++....  ....++   .++.+ .+|+.|+++||.+. +.|++.+++.+.+.+.++++.+++.|.+....+  
T Consensus       122 ~~-~~~~r~~~~~~~~~~~~g---~~l~~-~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~--  193 (516)
T PLN02290        122 YN-TVTGKSWLQQQGTKHFIG---RGLLM-ANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESG--  193 (516)
T ss_pred             CC-CCCCCcchhhhHHHHHhc---CCccc-cCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence            63 3444542211  111122   34544 57999999999865 789999999999999999999999998654322  


Q ss_pred             CcccchHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHH
Q 040489          174 PVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENV  253 (413)
Q Consensus       174 ~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~  253 (413)
                      ..++|+.+.+..+++|+|++++||.+++...  ....................++|.+..+ .....++.....+.+.++
T Consensus       194 ~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~-p~~~~~~~~~~~~~~~~~  270 (516)
T PLN02290        194 QTEVEIGEYMTRLTADIISRTEFDSSYEKGK--QIFHLLTVLQRLCAQATRHLCFPGSRFF-PSKYNREIKSLKGEVERL  270 (516)
T ss_pred             CceEEhHHHHHHHHHHHHHHHHcCCccccch--HHHHHHHHHHHHHHHhhhhhcCchhhhC-CChhHHHHHHHHHHHHHH
Confidence            1479999999999999999999999874321  1111111111110000111223332211 122223344455677788


Q ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCc--ccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhC
Q 040489          254 LVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPE--EKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKH  331 (413)
Q Consensus       254 i~~~i~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~--~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~  331 (413)
                      +.++++++++......    .+....|+++.+++...++  ++..++++++.+++.++++||+|||+++++|++|+|++|
T Consensus       271 ~~~~i~~~~~~~~~~~----~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~  346 (516)
T PLN02290        271 LMEIIQSRRDCVEIGR----SSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASN  346 (516)
T ss_pred             HHHHHHHHHHHhhccc----CCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC
Confidence            8888887765431110    0011348999999754321  233589999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhhhcCCCC--CCCCCChhHHHhhhccccccCCCCCCCcchhh-hhhhccccccccccccccccceeee
Q 040489          332 PHVQETVYTEIRGVVGENEE--GPKYRVPLFLFICIPDLRIHMHLSLDDPECVR-AIWYSEKEDKESFWNKSTVVEATYI  408 (413)
Q Consensus       332 P~vq~Kl~eEi~~v~g~~~~--~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  408 (413)
                      |++|+|+++||++++|++..  +++++|||++|||+||||+|||+|. ++|.+. +..+     .+.+++++++|..+.+
T Consensus       347 P~vq~kl~~Ei~~v~~~~~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d~~i-----~g~~IP~Gt~V~~~~~  420 (516)
T PLN02290        347 PTWQDKVRAEVAEVCGGETPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFEDIKL-----GDLHIPKGLSIWIPVL  420 (516)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCCeeE-----CCEEECCCCEEEecHH
Confidence            99999999999999986532  8899999999999999999999997 566554 4443     4789999999998888


Q ss_pred             eeec
Q 040489          409 NIVR  412 (413)
Q Consensus       409 ~~~~  412 (413)
                      ++-|
T Consensus       421 ~~~r  424 (516)
T PLN02290        421 AIHH  424 (516)
T ss_pred             HhcC
Confidence            8765


No 13 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=2.2e-49  Score=397.50  Aligned_cols=394  Identities=19%  Similarity=0.280  Sum_probs=272.0

Q ss_pred             hHHHHHHHHHHHHHHhhhhhcCC-----CCCCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhc-CCeEEEEcCCc
Q 040489            5 FIILISISIAALLKAFISVIISP-----KYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKL-GPVVTLFIGPR   78 (413)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~ky-G~i~~~~~g~~   78 (413)
                      +-|++.+++.+.-...+.|+++.     +...++||||+++|++||++++.... ....++.++.++| |+||++++|++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PPgp~~~P~iGnl~~l~~~~-~~~~~~~~~~~~~~g~i~~~~lg~~   86 (534)
T PLN03018          8 FQILLGFIVFIASITLLGRILSRPSKTKDRSRQLPPGPPGWPILGNLPELIMTR-PRSKYFHLAMKELKTDIACFNFAGT   86 (534)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCcCCCCCCeeccHHHhccCC-CcchhHHHHHHHhCCCeEEEEeCCc
Confidence            34444444433333344554421     11235899999999999999874321 1123466666666 79999999999


Q ss_pred             cEEEEeChHHHHHHHHhcCcccccCCCCCCCcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHH
Q 040489           79 PAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLE  158 (413)
Q Consensus        79 ~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~  158 (413)
                      ++|+++||++++++|++++..|.+|+... ....++.+..++.+..+|+.|+++||.+.+.++++...+.+....+.+++
T Consensus        87 ~~vvvsdpe~ikevl~~~~~~f~~rp~~~-~~~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~  165 (534)
T PLN03018         87 HTITINSDEIAREAFRERDADLADRPQLS-IMETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEAD  165 (534)
T ss_pred             cEEEECCHHHHHHHHHhCcHhhcCCCCch-hhhhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            99999999999999998888898876433 22334433335656557999999999987555566656666667777788


Q ss_pred             HHHHHHHhhccCCCCCcccchHHHHHHHHHHHHHHHHhcCCCCh--------HH-HHHHHHHHHHHHHH---hcCCcccc
Q 040489          159 ILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE--------SQ-IKKIENVQRTQLLA---FGNFNILN  226 (413)
Q Consensus       159 ~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~--------~~-~~~~~~~~~~~~~~---~~~~~~~~  226 (413)
                      .+++.|.+....+   .++|+.+++..+++|+|++++||.++..        .. ...+..........   .......+
T Consensus       166 ~l~~~l~~~~~~~---~~vd~~~~~~~~t~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (534)
T PLN03018        166 NLIAYIHSMYQRS---ETVDVRELSRVYGYAVTMRMLFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVD  242 (534)
T ss_pred             HHHHHHHHhcccC---CceeHHHHHHHHHHHHHHHHHhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHH
Confidence            9999998644333   5699999999999999999999998631        11 11111111111111   11111123


Q ss_pred             ccc-ccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHH
Q 040489          227 FWP-RLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSL  305 (413)
Q Consensus       227 ~~p-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~  305 (413)
                      ++| ++..+......++.......+.+++.++++++++......    ......|+++.|++...+++...+|+++|.++
T Consensus       243 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~  318 (534)
T PLN03018        243 YVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDERVELWREKG----GKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQ  318 (534)
T ss_pred             HhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc----CCCCcccHHHHHHHhhcccCCCCCCHHHHHHH
Confidence            333 3321111111223333445667788888887765431111    00112489999997643212224999999999


Q ss_pred             HHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchh
Q 040489          306 CSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECV  382 (413)
Q Consensus       306 ~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~  382 (413)
                      +.++++||+|||+++++|++++|++||++|+|+++||+++++.+..   +++.+|||++|||+||||+|||+|+..+|.+
T Consensus       319 ~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~  398 (534)
T PLN03018        319 CVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVA  398 (534)
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCccc
Confidence            9999999999999999999999999999999999999999985432   8899999999999999999999999888865


Q ss_pred             h-hhhhccccccccccccccccceeeeeeec
Q 040489          383 R-AIWYSEKEDKESFWNKSTVVEATYINIVR  412 (413)
Q Consensus       383 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (413)
                      . ++.+     .++..+++++|..+.+++-|
T Consensus       399 ~~d~~i-----~G~~IpkGt~V~~~~~~~~~  424 (534)
T PLN03018        399 RQDTTL-----GGYFIPKGSHIHVCRPGLGR  424 (534)
T ss_pred             CCCeeE-----CCEEECCCCEEEEChHHhcC
Confidence            4 3433     46888999999988888765


No 14 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=9.1e-50  Score=398.21  Aligned_cols=383  Identities=17%  Similarity=0.248  Sum_probs=269.7

Q ss_pred             CchhHHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEE
Q 040489            2 EFWFIILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAI   81 (413)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v   81 (413)
                      |-|-.++.|++. .+++..+.++- ++++ +.+|||+++|++||++++..   .++.++.+++++||++|++++|+.++|
T Consensus         2 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~v   75 (482)
T PTZ00404          2 MLFNIILFLFIF-YIIHNAYKKYK-KIHK-NELKGPIPIPILGNLHQLGN---LPHRDLTKMSKKYGGIFRIWFADLYTV   75 (482)
T ss_pred             chHHHHHHHHHH-HHHHHHHHHhh-hccC-CCCCCCCCCCeeccHhhhcc---cHHHHHHHHHHHhCCeeEEEecCCCEE
Confidence            334344444444 23333344444 4433 78999999999999988743   578899999999999999999999999


Q ss_pred             EEeChHHHHHHHHhcCcccccCCCCCCCc-ccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHH
Q 040489           82 FIADRSLAHKALVQNGAIFADRPRPLPTS-KIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEIL  160 (413)
Q Consensus        82 ~i~dpe~i~~il~~~~~~f~~r~~~~~~~-~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~  160 (413)
                      +++||+++++++.++...|.+++...... ..+   +.++.+ .+|+.|+++||.+. +.|++..++++.+.+.+.++.+
T Consensus        76 ~i~~p~~~~~il~~~~~~~~~r~~~~~~~~~~~---~~~l~~-~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l  150 (482)
T PTZ00404         76 VLSDPILIREMFVDNFDNFSDRPKIPSIKHGTF---YHGIVT-SSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVL  150 (482)
T ss_pred             EECCHHHHHHHHHhcchhhcCCCCcceeeeecc---CCceec-cChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHH
Confidence            99999999999987766777665432111 111   235544 58999999999875 7899999999999999999999


Q ss_pred             HHHHHhhccCCCCCcccchHHHHHHHHHHHHHHHHhcCCCChH------HHHHHHHHHHHHHHHhcCCcccccccccchh
Q 040489          161 LNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDES------QIKKIENVQRTQLLAFGNFNILNFWPRLSKI  234 (413)
Q Consensus       161 ~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~  234 (413)
                      ++.|.+....+   ..+|+.+.+..+++|+|++++||.+++..      ....+.......+.........++++++...
T Consensus       151 ~~~l~~~~~~~---~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (482)
T PTZ00404        151 IESMKKIESSG---ETFEPRYYLTKFTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL  227 (482)
T ss_pred             HHHHHHHHhcC---CccCHHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh
Confidence            99997654333   57999999999999999999999987421      1122333222322222221122223322211


Q ss_pred             hchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhccc
Q 040489          235 VFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGT  314 (413)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~  314 (413)
                       +........+..+.+.+++.+.++++++..  ..      +.+.|+++.|+++..+  ....+.++|.+++.++++||+
T Consensus       228 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~------~~~~dll~~ll~~~~~--~~~~~~~~i~~~~~~~~~AG~  296 (482)
T PTZ00404        228 -YYQYLEHTDKNFKKIKKFIKEKYHEHLKTI--DP------EVPRDLLDLLIKEYGT--NTDDDILSILATILDFFLAGV  296 (482)
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--CC------CCcccHHHHHHHHhcc--CCcccHHHHHHHHHHHHHhcc
Confidence             111111122334455555555555443321  00      1134899999975421  111223458899999999999


Q ss_pred             ccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhh-hhhhccc
Q 040489          315 DTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVR-AIWYSEK  390 (413)
Q Consensus       315 dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~-~~~~~~~  390 (413)
                      ||||++++|++|+|++||++|+|+++|++++++++..   +++++||||+|||+||||+|||+|+.++|.+. ++.+.  
T Consensus       297 dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~--  374 (482)
T PTZ00404        297 DTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIG--  374 (482)
T ss_pred             chHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCCEEec--
Confidence            9999999999999999999999999999999986432   88999999999999999999999987777554 44442  


Q ss_pred             cccccccccccccceeeeeeecC
Q 040489          391 EDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       391 ~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                        .+...++++.|..+.+++-|.
T Consensus       375 --~g~~Ip~Gt~V~~~~~a~hrd  395 (482)
T PTZ00404        375 --GGHFIPKDAQILINYYSLGRN  395 (482)
T ss_pred             --CCeEECCCCEEEeeHHHhhCC
Confidence              467899999999988887663


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=1.3e-49  Score=395.03  Aligned_cols=357  Identities=22%  Similarity=0.329  Sum_probs=266.4

Q ss_pred             CCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcccc
Q 040489           34 PPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIV  113 (413)
Q Consensus        34 ~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~~~  113 (413)
                      ||||+++|++||++++..  .+++.++.+++++||++|++++|++++|+|+||+++++||++++..|.+++... ....+
T Consensus         1 ppgp~~lP~iG~l~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~-~~~~~   77 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKE--KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSK-ALTVL   77 (466)
T ss_pred             CcCCCCCCccccHHHcCC--CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhh-HHHHH
Confidence            689999999999988753  347889999999999999999999999999999999999998888888775432 22323


Q ss_pred             cCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHHHH
Q 040489          114 SSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVL  193 (413)
Q Consensus       114 ~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi~~  193 (413)
                      ..++..+.+..+|+.|+++||.+.++++++..++.+.+.+++.++.+++.+.+....+ .+.++|+.+.+..+++|+++.
T Consensus        78 ~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~vd~~~~~~~~t~dvi~~  156 (466)
T PLN02655         78 TRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDD-PHSPVNFRDVFENELFGLSLI  156 (466)
T ss_pred             hcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcccc-CCCceeHHHHHHHHHHHHHHH
Confidence            3223345444569999999998888899998999999999999999999887654311 126799999999999999999


Q ss_pred             HHhcCCCChHH---H-------HHHHHHHHHHHHHhcCCcccccccccchhhchhHHH-HHHHHHHHHHHHHHHHHHHHH
Q 040489          194 MCFGDKLDESQ---I-------KKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWE-QFLQMRRDQENVLVPLIRARK  262 (413)
Q Consensus       194 ~~fG~~~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~r~  262 (413)
                      ++||.+++...   .       ..+.......+.......+.+++|.+..+. ...+. ...+......+++..++++++
T Consensus       157 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~  235 (466)
T PLN02655        157 QALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIP-NKSFETRVQTTEFRRTAVMKALIKQQK  235 (466)
T ss_pred             HHhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcC-chhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998864211   1       111111222222221222334566543322 12222 222223334567777777665


Q ss_pred             HhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHH
Q 040489          263 KMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEI  342 (413)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi  342 (413)
                      +.....       +...|+++.+++..     ..+|+++|.+++.++++||+||||++|+|++++|++||++|+|+++||
T Consensus       236 ~~~~~~-------~~~~d~l~~ll~~~-----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei  303 (466)
T PLN02655        236 KRIARG-------EERDCYLDFLLSEA-----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREI  303 (466)
T ss_pred             HhhcCC-------CCcccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            443111       11237999999743     358999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCC--CCCCCChhHHHhhhccccccCCCCCCCcchh-hhhhhccccccccccccccccceeeeeeec
Q 040489          343 RGVVGENEE--GPKYRVPLFLFICIPDLRIHMHLSLDDPECV-RAIWYSEKEDKESFWNKSTVVEATYINIVR  412 (413)
Q Consensus       343 ~~v~g~~~~--~~~~~lpyl~avikEtlRl~pp~~~~~pr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (413)
                      ++++|+...  +++++|||++|||+||||+|||+|...+|.+ .++.+     .+...++++.|..+.+++-|
T Consensus       304 ~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~-----~g~~ip~gt~v~~~~~~~~~  371 (466)
T PLN02655        304 REVCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTL-----GGYDIPAGTQIAINIYGCNM  371 (466)
T ss_pred             HHHhCCCCCCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCccc-----CCEEECCCCEEEecHHHhcC
Confidence            999986432  8889999999999999999999999887755 45554     36889999999888887765


No 16 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=4.5e-49  Score=393.72  Aligned_cols=347  Identities=18%  Similarity=0.178  Sum_probs=255.2

Q ss_pred             CCCCCCCCcccccccchhhhhc--cCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCC
Q 040489           31 TNLPPGPFNLPVIGNLQWLLKS--FSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLP  108 (413)
Q Consensus        31 ~~~~PgP~~~pl~G~l~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~  108 (413)
                      .++||||+++|++||++.+...  ...++.++.+++++||++|++++|++++|+++||++++++|++++..|.++.... 
T Consensus        37 ~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~-  115 (490)
T PLN02500         37 FNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRS-  115 (490)
T ss_pred             CCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchH-
Confidence            4789999999999998765432  2357788999999999999999999999999999999999998877775442211 


Q ss_pred             CcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhH-HHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHH
Q 040489          109 TSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKS-YKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAM  187 (413)
Q Consensus       109 ~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~  187 (413)
                      ...+++.  .++.+ .+|+.||++||.+. +.|++.+++. +.+.+.+.+..+++.|..    +   ..+|+.+.++.++
T Consensus       116 ~~~~~g~--~~~~~-~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~----~---~~vd~~~~~~~~~  184 (490)
T PLN02500        116 IGGILGK--WSMLV-LVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE----N---STFSAQDEAKKFT  184 (490)
T ss_pred             HHHHhCc--ccccc-cCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC----C---CCEEehHHHHHHH
Confidence            1223331  24444 47999999999875 7899988887 456666666666665532    2   4689999999999


Q ss_pred             HHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 040489          188 FCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEE  267 (413)
Q Consensus       188 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~  267 (413)
                      +|++++++||.+.++.....+.............  ....+|..       .+++..+..+.+.+++.++++++++....
T Consensus       185 ~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  255 (490)
T PLN02500        185 FNLMAKHIMSMDPGEEETEQLKKEYVTFMKGVVS--APLNFPGT-------AYRKALKSRATILKFIERKMEERIEKLKE  255 (490)
T ss_pred             HHHHHHHHhCCCCCchHHHHHHHHHHHHHhhhhc--chhcCCCc-------ccHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999999999886543323332222222221111  11112321       12344455667778888888877654311


Q ss_pred             hhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhc
Q 040489          268 ESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG  347 (413)
Q Consensus       268 ~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g  347 (413)
                      +.    ......|+++.+++.      ..+|+++|.+++.++++||+|||+++++|++|+|++||++|+|+++|++++++
T Consensus       256 ~~----~~~~~~d~l~~ll~~------~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~  325 (490)
T PLN02500        256 ED----ESVEEDDLLGWVLKH------SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIAR  325 (490)
T ss_pred             cc----CCCCcchHHHHHHhc------cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhh
Confidence            11    001123899998863      24899999999999999999999999999999999999999999999999874


Q ss_pred             ------CCC-C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          348 ------ENE-E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       348 ------~~~-~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                            ++. . +|+++|||++|||+||||+|||+|+..+++.+++.+     .+++.+++++|..+.|++-|+
T Consensus       326 ~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~~R~~~~d~~~-----~G~~IPkGt~V~~~~~~~hrd  394 (490)
T PLN02500        326 AKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRY-----KGYDIPSGWKVLPVIAAVHLD  394 (490)
T ss_pred             ccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCeeeEeCCCcee-----CCEEECCCCEEEechhhcccC
Confidence                  111 2 889999999999999999999999964445555554     579999999999999998764


No 17 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=8.6e-50  Score=396.70  Aligned_cols=362  Identities=23%  Similarity=0.328  Sum_probs=262.1

Q ss_pred             CCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCC-C
Q 040489           30 KTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPL-P  108 (413)
Q Consensus        30 ~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~-~  108 (413)
                      +.+.+|||+++|++|+++++.........++.++..+||++|+.|+|+.++|+++||+.+++|+.++...+.+.+... .
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~  112 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES  112 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence            447899999999999999986432567789999999999999999999999999999999999965444443322211 1


Q ss_pred             CcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHH
Q 040489          109 TSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMF  188 (413)
Q Consensus       109 ~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~  188 (413)
                      ..++++.   ++.++ +|+.|+++||.+. ++|+.+.++.+.....+.+..+...+..... +   ..+|+.++++.+|+
T Consensus       113 ~~~~lG~---gll~~-~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~---~~vd~~~~~~~~tl  183 (497)
T KOG0157|consen  113 LKPWLGD---GLLFS-DGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAAS-G---EEVDLQDLLKRLTL  183 (497)
T ss_pred             HHHHhcC---ccccC-CchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-C---CeEcHHHHHHHHHH
Confidence            2344442   45454 4999999998765 8999999999998888877777777766432 2   23999999999999


Q ss_pred             HHHHHHHhcCCC-C--hHHHHHHHHHHHHHHHHhcCCccccccc-ccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040489          189 CLLVLMCFGDKL-D--ESQIKKIENVQRTQLLAFGNFNILNFWP-RLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKM  264 (413)
Q Consensus       189 ~vi~~~~fG~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~  264 (413)
                      |+|++++||... +  .....++...+......+.   .....| +...+...+..++..++.+.+.+++.++|++|++.
T Consensus       184 d~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~  260 (497)
T KOG0157|consen  184 DIICKTAMGPESLDAEGPELFEYVQAFDDLTELIS---KRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREE  260 (497)
T ss_pred             HHHHHHhcCCccccccCCcccHHHHHHHHHHHHHH---HHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999221 1  1111122222221111111   011122 22111111245677778888999999999988876


Q ss_pred             hhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHh
Q 040489          265 KEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRG  344 (413)
Q Consensus       265 ~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~  344 (413)
                      ......  .+.....|+++.+....   + ..+|+++|+++|.+|++||+||||++++|++++|+.||+||+|++||+++
T Consensus       261 ~~~~~~--~~~~~~~d~L~~~~~~~---~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~  334 (497)
T KOG0157|consen  261 LEKEGS--GEEKKRLDFLDTLLLEE---D-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDE  334 (497)
T ss_pred             HHhcCC--cccchhhhHHHHHHHhc---c-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            532211  00122347888633211   2 67999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCC--CCC--CCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          345 VVGENEE--GPK--YRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       345 v~g~~~~--~~~--~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      ++|+...  ++.  ++|+||++||+||||||||+|+..+++..++.+..+    ...++|+.|.-...+|.|+
T Consensus       335 i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g----~~IPkG~~V~i~~~~~~r~  403 (497)
T KOG0157|consen  335 ILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGG----YTIPKGTNVLISIYALHRD  403 (497)
T ss_pred             HhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCC----cEeCCCCEEEEehHHhccC
Confidence            9985432  222  259999999999999999999998888888666433    7788888887777777663


No 18 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=3.8e-48  Score=386.68  Aligned_cols=361  Identities=15%  Similarity=0.150  Sum_probs=260.2

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEE---EEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCC
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVT---LFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLP  108 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~---~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~  108 (413)
                      +..|||+++|++||+..+..+....++++.+...+||..++   .|+|+.|+|+++||+++++||.++...|.+++....
T Consensus        31 ~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~  110 (500)
T PLN02169         31 HGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKK  110 (500)
T ss_pred             CCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHH
Confidence            46899999999999988765555577777887778997655   678999999999999999999887777766532111


Q ss_pred             CcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhH--HHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHH
Q 040489          109 TSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKS--YKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYA  186 (413)
Q Consensus       109 ~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~  186 (413)
                      ...++   +.++.+ .+|+.||++||.+. |+|+...++.  +.+.++++++.+++.|.+.+..+   .++|+.+.+..+
T Consensus       111 ~~~~~---g~gl~~-~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~---~~vd~~~~~~~~  182 (500)
T PLN02169        111 IFDVL---GEGILT-VDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHEN---IIIDLQDVFMRF  182 (500)
T ss_pred             HHHhh---cCcccc-cCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CeEeHHHHHHHH
Confidence            11222   235644 47999999999875 8899887764  33666677788888887654433   679999999999


Q ss_pred             HHHHHHHHHhcCCCChHH----HHHHHHHHHHHHHHhcCCcccccccccc----hhhchhHHHHHHHHHHHHHHHHHHHH
Q 040489          187 MFCLLVLMCFGDKLDESQ----IKKIENVQRTQLLAFGNFNILNFWPRLS----KIVFVKKWEQFLQMRRDQENVLVPLI  258 (413)
Q Consensus       187 ~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~----~~~~~~~~~~~~~~~~~~~~~i~~~i  258 (413)
                      ++|+|++++||.+.+...    ...+............   ...+.|++.    .++..+.+++..+..+.+.+++.++|
T Consensus       183 t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I  259 (500)
T PLN02169        183 MFDTSSILMTGYDPMSLSIEMLEVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKII  259 (500)
T ss_pred             HHHHHHhheeCCCccccCCCCCCCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHH
Confidence            999999999998763211    0122222211111100   011223211    11112234556667778888999999


Q ss_pred             HHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCc--ccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHH
Q 040489          259 RARKKMKEEESLSIKEREYVLSYVDTLLDLQLPE--EKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQE  336 (413)
Q Consensus       259 ~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~--~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~  336 (413)
                      +++++......   +..+...|+++.+++....+  .+..+++++|++++.++++||+||||++++|++|+|++||++|+
T Consensus       260 ~~r~~~~~~~~---~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~  336 (500)
T PLN02169        260 SSRRKEEISRA---ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMA  336 (500)
T ss_pred             HHHHHHhhccc---cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHH
Confidence            88765321110   00011247999998754211  12357899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhcCCCCCCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          337 TVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       337 Kl~eEi~~v~g~~~~~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      |+++||+++++.   +++.+||||+|||+||||+|||+|+..|+++.+...    ..+...++++++..+.+++-|+
T Consensus       337 kl~~Ei~~v~~~---~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~----~~G~~IpkGt~v~i~~~~ihrd  406 (500)
T PLN02169        337 KIRHEINTKFDN---EDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVL----PSGHKVDAESKIVICIYALGRM  406 (500)
T ss_pred             HHHHHHHhhCCH---HHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCc----cCCEEECCCCEEEEcHHHhhCC
Confidence            999999998642   789999999999999999999999999998765222    2468889999999888888764


No 19 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.5e-47  Score=358.71  Aligned_cols=356  Identities=20%  Similarity=0.285  Sum_probs=277.4

Q ss_pred             CCCCCCCcccccccchhhhh-ccCCchHHHHHHHhhcCCeEEEE-cCCccEEEEeChHHHHHHHHhcCcccccCCCCC-C
Q 040489           32 NLPPGPFNLPVIGNLQWLLK-SFSEIEPILRNLHSKLGPVVTLF-IGPRPAIFIADRSLAHKALVQNGAIFADRPRPL-P  108 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~-~~~~~~~~~~~~~~kyG~i~~~~-~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~-~  108 (413)
                      .-||||+++|++|.++.+.. ...+.|+....++++||+||+.. +|+...|++.||++++.++..+|. ++-|+... .
T Consensus        50 ~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~  128 (519)
T KOG0159|consen   50 EEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEP  128 (519)
T ss_pred             hhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccch
Confidence            36799999999999886432 23478999999999999999999 889999999999999999988763 34453111 1


Q ss_pred             ---CcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHH
Q 040489          109 ---TSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQY  185 (413)
Q Consensus       109 ---~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~  185 (413)
                         ..+.++ +..|+. ..+|++|.+.|..+++.+++|+.+++|.+.+++++++|++.++...+.+.+..+.|+.+.+..
T Consensus       129 w~~~rd~~~-~~~Gl~-~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~  206 (519)
T KOG0159|consen  129 WVAYRDFRG-GVCGLF-LLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYR  206 (519)
T ss_pred             hhhhHHhhc-cCCCcc-cCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence               122222 334554 468999999999999999999999999999999999999999987653223357899999999


Q ss_pred             HHHHHHHHHHhcCCCC------hHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHH
Q 040489          186 AMFCLLVLMCFGDKLD------ESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIR  259 (413)
Q Consensus       186 ~~~~vi~~~~fG~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~  259 (413)
                      ++++.||.++||.+++      +++...+....+.++....   ...+.|.+.+++..+.|+++.++.+.+.++..+.|+
T Consensus       207 wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~---~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id  283 (519)
T KOG0159|consen  207 WSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSA---QLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYID  283 (519)
T ss_pred             HHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHH---HHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999983      2333444444444444322   234456566666778999999999999999999998


Q ss_pred             HHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHH
Q 040489          260 ARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVY  339 (413)
Q Consensus       260 ~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~  339 (413)
                      ...++.+.+..  ...+....+++.++.       ..++.+++..+++++++||.||||+|++|++|.|++||++|+||+
T Consensus       284 ~~l~~l~~~~~--~~~~~~~~l~~~L~~-------~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~  354 (519)
T KOG0159|consen  284 NALEELEKQDS--AGSEYTGSLLELLLR-------KELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLR  354 (519)
T ss_pred             HHHHHHHhccc--cccchhHHHHHHHHH-------ccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHH
Confidence            87766532210  000111134444443       247899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcCCC-C---CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhcccccccccccccccc-ceee
Q 040489          340 TEIRGVVGENE-E---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVV-EATY  407 (413)
Q Consensus       340 eEi~~v~g~~~-~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~-~~~~  407 (413)
                      +|+.+++.... .   +++.+||||+||||||+||||.+|...+...+|.+.|     +++.+++|+| .+.|
T Consensus       355 ~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~-----gY~vPagT~V~l~~~  422 (519)
T KOG0159|consen  355 EEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLS-----GYHVPAGTLVVLFLY  422 (519)
T ss_pred             HHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceec-----cceecCCCeEEEeeh
Confidence            99999998642 2   7889999999999999999999999888888776654     7899999976 4444


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=9e-48  Score=380.58  Aligned_cols=360  Identities=24%  Similarity=0.385  Sum_probs=272.7

Q ss_pred             CCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcccc
Q 040489           34 PPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIV  113 (413)
Q Consensus        34 ~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~~~  113 (413)
                      ||||+++|++||++++.+ .+.+++++.+++++||+||++++|++++|+|+||+.+++|+.+++..|..++.........
T Consensus         1 Ppgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~   79 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRR-KGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR   79 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHT-THHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcC-CCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence            799999999999999975 4467889999999999999999999999999999999999988766665543211111100


Q ss_pred             -cCCCcceEeccCChhHHHHHHHHhhhhcCHH-HHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHH
Q 040489          114 -SSNQHNISSASYGTTWRLFRRNLSAEILHPS-RVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLL  191 (413)
Q Consensus       114 -~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi  191 (413)
                       ...+.++.+ .+|+.|+.+|+.+. +.|+.. .+ ++.+.+++.++.+++.|......+   ..+|+.+.++.+++|++
T Consensus        80 ~~~~~~~l~~-~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~---~~vd~~~~~~~~~~d~i  153 (463)
T PF00067_consen   80 GPFGGKGLFF-SDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSS---GPVDLFDWLRRFALDVI  153 (463)
T ss_dssp             HHHTTTSSTT-SSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSE---SEEEHHHHHHHHHHHHH
T ss_pred             cccccccccc-cccccccccccccc-ccccccccc-cccccccccccccccccccccccc---ceeeeeccccccccccc
Confidence             112234533 56899999999876 566776 66 899999999999999999876543   47999999999999999


Q ss_pred             HHHHhcCCCC---hHHHHHHHHHHHHHHHHhcC--CcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 040489          192 VLMCFGDKLD---ESQIKKIENVQRTQLLAFGN--FNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKE  266 (413)
Q Consensus       192 ~~~~fG~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~  266 (413)
                      ++++||.+++   +.....+......+...+..  ..+...+|++.. +..+.++...++.+.+.+++.++++++++...
T Consensus       154 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  232 (463)
T PF00067_consen  154 GRVLFGKDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKY-LPTPLFRRFKRARDRLRKYIKEIIEERREELD  232 (463)
T ss_dssp             HHHHHSSHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHH
T ss_pred             ccccccceeeecccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence            9999999853   33333344433333322211  112334553332 23445566666667788888888888776542


Q ss_pred             hhhhhhhhhhhhhhHHHHHHhcc-CCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhh
Q 040489          267 EESLSIKEREYVLSYVDTLLDLQ-LPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGV  345 (413)
Q Consensus       267 ~~~~~~~~~~~~~~~ld~ll~~~-~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v  345 (413)
                      ..      .....|+++.+++.. ..+++..+|++++.++++++++||+|||+++++|++|+|++||++|+|+++||+++
T Consensus       233 ~~------~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~  306 (463)
T PF00067_consen  233 DG------DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSV  306 (463)
T ss_dssp             SS------SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred             cc------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            21      012348999999865 22222479999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhh-hhhhccccccccccccccccceeeeeeec
Q 040489          346 VGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVR-AIWYSEKEDKESFWNKSTVVEATYINIVR  412 (413)
Q Consensus       346 ~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (413)
                      ++++..   +++.+||||+|||+||||+|||+|+.++|.+. ++.+.     +.+.++|++|....+++-|
T Consensus       307 ~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~-----g~~ip~gt~v~~~~~~~~~  372 (463)
T PF00067_consen  307 LGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLG-----GYFIPKGTIVIVSIYALHR  372 (463)
T ss_dssp             TTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEET-----TEEEETTSEEEEEHHHHTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccccccc
Confidence            976543   78899999999999999999999977777665 44443     3889999999888776654


No 21 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.3e-46  Score=378.30  Aligned_cols=362  Identities=16%  Similarity=0.191  Sum_probs=250.6

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhc---CCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCC
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKL---GPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLP  108 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~ky---G~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~  108 (413)
                      +.+|||+++|++||++++...    +..+.++.++|   |++|.+++|+.++|+++||+++++|+.++...|.++.....
T Consensus        30 ~~~pgp~~~p~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~  105 (516)
T PLN03195         30 RNRKGPKSWPIIGAALEQLKN----YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS  105 (516)
T ss_pred             cccCCCCCCCeecchHHHHhc----cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH
Confidence            458999999999998776532    23456666666   89999999999999999999999999876555654321100


Q ss_pred             -CcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHH-HHHHHHHHHHHHhhccCCCCCcccchHHHHHHH
Q 040489          109 -TSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHAR-KWVLEILLNHLKSESKNGDRPVPVRVLDHFQYA  186 (413)
Q Consensus       109 -~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~  186 (413)
                       ...+++   .++.+ .+|+.|+++||.++ +.|++..++.+.+.+ .+.++.+++.|+.....+   .++|+.+++..+
T Consensus       106 ~~~~~~g---~~l~~-~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~---~~vd~~~~~~~~  177 (516)
T PLN03195        106 YMEVLLG---DGIFN-VDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFAN---QVVDMQDLFMRM  177 (516)
T ss_pred             HHHHHhc---Ceeec-cCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CeEcHHHHHHHH
Confidence             011122   34544 57999999999875 789999999998875 666777888776543333   579999999999


Q ss_pred             HHHHHHHHHhcCCCChHH----HHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040489          187 MFCLLVLMCFGDKLDESQ----IKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARK  262 (413)
Q Consensus       187 ~~~vi~~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~  262 (413)
                      ++|+|+.++||.+++...    ...+............ ....+.++.+..+......+...+....+.+++.+++++++
T Consensus       178 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  256 (516)
T PLN03195        178 TLDSICKVGFGVEIGTLSPSLPENPFAQAFDTANIIVT-LRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRK  256 (516)
T ss_pred             HHHHHHHHHhCCCccccccCCCccHHHHHHHHHHHHHH-HHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999874210    0112111111111100 00011111111111111123334455667777888887765


Q ss_pred             HhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHH
Q 040489          263 KMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEI  342 (413)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi  342 (413)
                      +.......  ..++...|+++.+++...+ ++..+++++|+++++++++||+||||++++|++|+|++||++|+|+++|+
T Consensus       257 ~~~~~~~~--~~~~~~~d~l~~ll~~~~~-~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei  333 (516)
T PLN03195        257 AEMDEARK--SGKKVKHDILSRFIELGED-PDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSEL  333 (516)
T ss_pred             HHHhcccc--ccccccccHHHHHHhccCC-CCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence            44311100  0001234899999975432 23469999999999999999999999999999999999999999999999


Q ss_pred             HhhhcCC--------------------C--C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhcccccccccccc
Q 040489          343 RGVVGEN--------------------E--E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNK  399 (413)
Q Consensus       343 ~~v~g~~--------------------~--~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~  399 (413)
                      ++++++.                    .  . +++.+||||+|||+||||+|||+|+..|+++.+...    ..+...++
T Consensus       334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~----~~G~~Ipk  409 (516)
T PLN03195        334 KALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVL----PDGTKVKA  409 (516)
T ss_pred             HHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCc----CCCcEECC
Confidence            9987431                    1  1 788999999999999999999999998877654221    24678899


Q ss_pred             ccccceeeeeeecC
Q 040489          400 STVVEATYINIVRI  413 (413)
Q Consensus       400 ~~~~~~~~~~~~~~  413 (413)
                      +++|-.+.|++-|+
T Consensus       410 Gt~V~~~~~~~h~d  423 (516)
T PLN03195        410 GGMVTYVPYSMGRM  423 (516)
T ss_pred             CCEEEEehHhhccC
Confidence            99998888887653


No 22 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.4e-45  Score=365.69  Aligned_cols=361  Identities=19%  Similarity=0.256  Sum_probs=262.5

Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeC
Q 040489            6 IILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIAD   85 (413)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~d   85 (413)
                      .++++.++..++..+..+-..+..+.+.||||+++|++||++++..  ++++.++.+++++||+++++++|++++|+++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ppgp~~~P~iG~~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~   86 (463)
T PLN02196          9 TLFAGALFLCLLRFLAGFRRSSSTKLPLPPGTMGWPYVGETFQLYS--QDPNVFFASKQKRYGSVFKTHVLGCPCVMISS   86 (463)
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCccchHHHHHh--cCHHHHHHHHHHHhhhhheeeecCCceEEEcC
Confidence            4455555533333333333333334467888989999999987643  35788999999999999999999999999999


Q ss_pred             hHHHHHHHHhcCcccccCCCCCCCc-ccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHH
Q 040489           86 RSLAHKALVQNGAIFADRPRPLPTS-KIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHL  164 (413)
Q Consensus        86 pe~i~~il~~~~~~f~~r~~~~~~~-~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l  164 (413)
                      |+++++++.++...|.  +...... ..++  ..++.+ .+|+.|+++||.++ +.|++++++.+.+.+++.++.+++.|
T Consensus        87 p~~~~~vl~~~~~~~~--~~~~~~~~~~~g--~~~l~~-~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~  160 (463)
T PLN02196         87 PEAAKFVLVTKSHLFK--PTFPASKERMLG--KQAIFF-HQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSW  160 (463)
T ss_pred             HHHHHHHHhCCCCccc--ccCchHHHHHcC--cccccc-cCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcC
Confidence            9999999987766662  2211111 1222  234533 57999999999876 68999999999999988888888766


Q ss_pred             HhhccCCCCCcccchHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHH
Q 040489          165 KSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFL  244 (413)
Q Consensus       165 ~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~  244 (413)
                      .     +   .++|+.+.+..+++++++.++||.+.... ...+..........      ...+|+..   .....++..
T Consensus       161 ~-----~---~~v~~~~~~~~~~~~v~~~~~fG~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~---p~~~~~~~~  222 (463)
T PLN02196        161 E-----G---TQINTYQEMKTYTFNVALLSIFGKDEVLY-REDLKRCYYILEKG------YNSMPINL---PGTLFHKSM  222 (463)
T ss_pred             C-----C---CeEEeHHHHHHHHHHHHHHHHcCCCCchH-HHHHHHHHHHHhcc------hhcccccC---CCccchHHH
Confidence            3     2   46899999999999999999999875321 11122211111100      11123211   111123444


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHH
Q 040489          245 QMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWI  324 (413)
Q Consensus       245 ~~~~~~~~~i~~~i~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~  324 (413)
                      ++.+.+.+++.++++++++..          ....|+++.+++.     +..++++++.++++++++||+|||+++++|+
T Consensus       223 ~a~~~~~~~~~~~i~~~~~~~----------~~~~d~l~~ll~~-----~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~  287 (463)
T PLN02196        223 KARKELAQILAKILSKRRQNG----------SSHNDLLGSFMGD-----KEGLTDEQIADNIIGVIFAARDTTASVLTWI  287 (463)
T ss_pred             HHHHHHHHHHHHHHHHHhhcC----------CCcccHHHHHHhc-----CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence            556677777777777664321          1123788888852     2358999999999999999999999999999


Q ss_pred             HHHHhhChHHHHHHHHHHHhhhcCCC-----C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccc
Q 040489          325 MANLVKHPHVQETVYTEIRGVVGENE-----E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWN  398 (413)
Q Consensus       325 ~~~La~~P~vq~Kl~eEi~~v~g~~~-----~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~  398 (413)
                      +++|++||++|+|+++|++++++..+     . +++.+||||+|||+||||+|||+|+..+++++++.+     .+...+
T Consensus       288 l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~~R~~~~d~~i-----~g~~Ip  362 (463)
T PLN02196        288 LKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEY-----EGYLIP  362 (463)
T ss_pred             HHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCccccceeecccccc-----CCEEeC
Confidence            99999999999999999999987421     1 778899999999999999999999988777766555     368899


Q ss_pred             cccccceeeeeeec
Q 040489          399 KSTVVEATYINIVR  412 (413)
Q Consensus       399 ~~~~~~~~~~~~~~  412 (413)
                      +++++..+++++-|
T Consensus       363 kGt~v~~~~~~~~r  376 (463)
T PLN02196        363 KGWKVLPLFRNIHH  376 (463)
T ss_pred             CCCEEEeeHHHhcC
Confidence            99999988887765


No 23 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=2.2e-45  Score=364.42  Aligned_cols=340  Identities=16%  Similarity=0.181  Sum_probs=253.1

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcc
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSK  111 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~  111 (413)
                      ++||||+++|++||++.+.+   +.+.++.+++++||++|++++|++++++++||+++++++.+++..|..+... ....
T Consensus        31 ~~ppgp~~~P~~G~~~~~~~---~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~-~~~~  106 (463)
T PLN02774         31 GLPPGTMGWPLFGETTEFLK---QGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQ-SMLD  106 (463)
T ss_pred             CCCCCCCCCCchhhHHHHHH---hhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCH-HHHH
Confidence            68899999999999987753   3466899999999999999999999999999999999998777666433221 1223


Q ss_pred             cccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhH-HHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHH
Q 040489          112 IVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKS-YKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCL  190 (413)
Q Consensus       112 ~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~v  190 (413)
                      +++.  .++.. .+|+.|+++||.+. +.|++..++. +.+.+.+.++.+++.|..    +   .++|+.+.+..+++++
T Consensus       107 ~lg~--~~~~~-~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~v~~~~~~~~~~~~~  175 (463)
T PLN02774        107 ILGT--CNIAA-VHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG----L---KTIDIQEKTKEMALLS  175 (463)
T ss_pred             HhCc--cchhh-cCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC----C---CCEEeeHHHHHHHHHH
Confidence            3432  24433 47999999999875 7899999886 688888777777776632    2   4689999999999999


Q ss_pred             HHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q 040489          191 LVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESL  270 (413)
Q Consensus       191 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~~~~  270 (413)
                      ++.++||.+.+.. ...+...+.....  .......++|.       ..+++..++.+.+.+++.+.++++++..     
T Consensus       176 ~~~~~~g~~~~~~-~~~~~~~~~~~~~--~~~~~~~~lp~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----  240 (463)
T PLN02774        176 ALKQIAGTLSKPI-SEEFKTEFFKLVL--GTLSLPIDLPG-------TNYRSGVQARKNIVRMLRQLIQERRASG-----  240 (463)
T ss_pred             HHHHHcCCCChHH-HHHHHHHHHHHhc--ccccCCcCCCC-------hhhhHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence            9999999865322 1222222111111  11111111221       1234455566777888888887765321     


Q ss_pred             hhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhcCC-
Q 040489          271 SIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGEN-  349 (413)
Q Consensus       271 ~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g~~-  349 (413)
                           ....|+++.+++...  ++..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|++++++.. 
T Consensus       241 -----~~~~d~l~~ll~~~~--~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~  313 (463)
T PLN02774        241 -----ETHTDMLGYLMRKEG--NRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR  313 (463)
T ss_pred             -----CCcccHHHHHHhCcc--CCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC
Confidence                 112389999987432  334589999999999999999999999999999999999999999999999998642 


Q ss_pred             --C--C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          350 --E--E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       350 --~--~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                        .  . +++++|||++|||+|+||+|||+|...+++.+++.+     .+...++++.|.-+.+++-|+
T Consensus       314 ~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~~R~~~~d~~l-----~g~~IpkGt~v~~~~~~~~rd  377 (463)
T PLN02774        314 PEDPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMEL-----NGYVIPKGWRIYVYTREINYD  377 (463)
T ss_pred             CCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCcccccCCCeeE-----CCEEECCCCEEEEehHHhcCC
Confidence              1  2 889999999999999999999999765556666665     358899999998888877653


No 24 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=9.7e-45  Score=363.16  Aligned_cols=354  Identities=17%  Similarity=0.240  Sum_probs=258.4

Q ss_pred             CCCCCCCCCCCCCcccccccchhhhhc--cCCchHHHHHHHhhcCC--eEEEEcCCccEEEEeChHHHHHHHHhcCcccc
Q 040489           26 SPKYKTNLPPGPFNLPVIGNLQWLLKS--FSEIEPILRNLHSKLGP--VVTLFIGPRPAIFIADRSLAHKALVQNGAIFA  101 (413)
Q Consensus        26 ~~~~~~~~~PgP~~~pl~G~l~~~~~~--~~~~~~~~~~~~~kyG~--i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~  101 (413)
                      +++...++||||+++|++||++++...  ..+++.++.+++++||+  ++++++|+.++|+++||+++++|+.++ +.|.
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~  114 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFE  114 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Cccc
Confidence            344445789999999999999987642  34678899999999997  789999999999999999999999765 4454


Q ss_pred             cCCCCCCCcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHH
Q 040489          102 DRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLD  181 (413)
Q Consensus       102 ~r~~~~~~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~  181 (413)
                      ++.... ...+++.  .++. ..+|+.|+++||.+...+.+++.++.+.+.+.+.++.+++.|..   .    ..+|+.+
T Consensus       115 ~~~~~~-~~~~~g~--~~~~-~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~---~----~~v~~~~  183 (490)
T PLN02302        115 PGWPES-TVELIGR--KSFV-GITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSK---M----GEIEFLT  183 (490)
T ss_pred             cCCchh-HHHHhcc--cccc-ccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcC---C----CCEehHH
Confidence            432211 1123322  2332 34799999999988744436788999999999888888887742   2    3589999


Q ss_pred             HHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHH
Q 040489          182 HFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRAR  261 (413)
Q Consensus       182 ~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r  261 (413)
                      .++.++++++++++||.+..... ..+..........+..  ....+|..       .+++..+..+.+.+++.+.++++
T Consensus       184 ~~~~~~~~vi~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~p~~-------~~~~~~~~~~~l~~~~~~~i~~~  253 (490)
T PLN02302        184 ELRKLTFKIIMYIFLSSESELVM-EALEREYTTLNYGVRA--MAINLPGF-------AYHRALKARKKLVALFQSIVDER  253 (490)
T ss_pred             HHHHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHHHhhh--CCcCCCch-------hhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998864321 2222211111111111  01112211       12333445566778888888877


Q ss_pred             HHhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHH
Q 040489          262 KKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTE  341 (413)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eE  341 (413)
                      ++......     .....|+++.+++... +++..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|
T Consensus       254 ~~~~~~~~-----~~~~~d~l~~ll~~~~-~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E  327 (490)
T PLN02302        254 RNSRKQNI-----SPRKKDMLDLLLDAED-ENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAE  327 (490)
T ss_pred             HHhhhccC-----CCCcCCHHHHHHhhhc-cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            54431110     0112489999997643 23446899999999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCC------C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeec
Q 040489          342 IRGVVGENE------E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVR  412 (413)
Q Consensus       342 i~~v~g~~~------~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (413)
                      ++++++...      . +++++||||+|||+|+||++||+|+..+++.+++.+     .+...+++++|....+++-|
T Consensus       328 ~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~~R~~~~d~~~-----~g~~Ip~Gt~v~~~~~~~~r  400 (490)
T PLN02302        328 QEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTVFREAKTDVEV-----NGYTIPKGWKVLAWFRQVHM  400 (490)
T ss_pred             HHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccchhcccCCEeE-----CCEEECCCCEEEeeHHHhcC
Confidence            999987421      1 678899999999999999999999977667666655     46888999998888777655


No 25 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=5.2e-45  Score=363.79  Aligned_cols=363  Identities=17%  Similarity=0.142  Sum_probs=265.5

Q ss_pred             CCCCCCCcccccccchhhhhc--cCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCC
Q 040489           32 NLPPGPFNLPVIGNLQWLLKS--FSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPT  109 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~  109 (413)
                      ++..|-.|||++|+......+  .+.++..+.+|+++||++|++++|+.++|+++||+++++|+.+.+..|.+++.....
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            567889999999998887653  356888999999999999999999999999999999999998776777765422111


Q ss_pred             cccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHH-HHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHH
Q 040489          110 SKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKH-ARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMF  188 (413)
Q Consensus       110 ~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~  188 (413)
                      ..+++   .++.+ .+|+.|+++||.++ +.|+...++.+.+ .+.++++.+++.|.+....+   .++|+.++++.+++
T Consensus        92 ~~~~~---~~i~~-~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g---~~vd~~~~~~~~~~  163 (489)
T PLN02936         92 EFLFG---SGFAI-AEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSG---EAVNMEAKFSQLTL  163 (489)
T ss_pred             HHHhc---Ccccc-CCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceeHHHHHHHHHH
Confidence            11222   24433 57999999999875 7889888888755 67888899999998765433   68999999999999


Q ss_pred             HHHHHHHhcCCCChHH-HHHHHHHHHHHHHHhcCCcccccccccchh---hchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040489          189 CLLVLMCFGDKLDESQ-IKKIENVQRTQLLAFGNFNILNFWPRLSKI---VFVKKWEQFLQMRRDQENVLVPLIRARKKM  264 (413)
Q Consensus       189 ~vi~~~~fG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~---~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~  264 (413)
                      |+|+.++||.+++... ..++.......+..... .....+|++...   ...+.+++..++.+.+.+++.++++++++.
T Consensus       164 dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~  242 (489)
T PLN02936        164 DVIGLSVFNYNFDSLTTDSPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEI  242 (489)
T ss_pred             HHHHHHHcCCCccccccCcHHHHHHHHHHHHHHH-hhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999985311 01111111111111110 111223322100   011223455566677778888888776654


Q ss_pred             hhhhhhhhh-h---hhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHH
Q 040489          265 KEEESLSIK-E---REYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYT  340 (413)
Q Consensus       265 ~~~~~~~~~-~---~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~e  340 (413)
                      ......... +   .+...++++.|+...     ..+++++|.++++++++||+||||++++|++|+|++||++|+|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~-----~~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~  317 (489)
T PLN02936        243 VEAEGEVIEGEEYVNDSDPSVLRFLLASR-----EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQE  317 (489)
T ss_pred             HhhcccccccccccccCchHHHHHHHhcc-----ccCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence            321110000 0   012347899988643     2489999999999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCC--CCCCCChhHHHhhhccccccCCCCCCCcchhhh-hhhccccccccccccccccceeeeeeecC
Q 040489          341 EIRGVVGENEE--GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRA-IWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       341 Ei~~v~g~~~~--~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      |++++++....  +++++||||+|||+||||+|||+|+..||++.+ +.+     .+.+.+++++|..+.+++-|+
T Consensus       318 Ei~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~-----~g~~Ip~Gt~v~~~~~~~~rd  388 (489)
T PLN02936        318 ELDRVLQGRPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLP-----GGYKVNAGQDIMISVYNIHRS  388 (489)
T ss_pred             HHHHHhcCCCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCcccc-----CCeEECCCCEEEecHHhccCC
Confidence            99999985432  778999999999999999999999999998754 332     457889999999998887663


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2.1e-44  Score=356.56  Aligned_cols=353  Identities=17%  Similarity=0.178  Sum_probs=251.6

Q ss_pred             CCCCCCCCCCCcccccccchhhhhc--cCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCC
Q 040489           28 KYKTNLPPGPFNLPVIGNLQWLLKS--FSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPR  105 (413)
Q Consensus        28 ~~~~~~~PgP~~~pl~G~l~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~  105 (413)
                      +.+.++||||.++|++||++++..+  ..+++.++.+++++||+||++++|+.++|+++||++++++|.+++..|..+..
T Consensus         3 ~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~   82 (452)
T PLN03141          3 KKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYP   82 (452)
T ss_pred             CCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCc
Confidence            4445789999999999999987542  24578899999999999999999999999999999999999988877765532


Q ss_pred             CCCCcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHH-HHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHH
Q 040489          106 PLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSY-KHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQ  184 (413)
Q Consensus       106 ~~~~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~  184 (413)
                      . ....+++.  .++.+ .+|+.||++|+.+. +.|++..++.+ .+.+.+.++.+++.|.    .+   .++|+.+.+.
T Consensus        83 ~-~~~~l~g~--~~~~~-~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~  150 (452)
T PLN03141         83 K-SLTELMGK--SSILL-INGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWR----DD---PPVLVQDETK  150 (452)
T ss_pred             h-hHHHHhCc--ccccc-cCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhcc----CC---CCEEhHHHHH
Confidence            1 12233432  34544 47999999999875 66777666653 3444444444444332    22   5789999999


Q ss_pred             HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040489          185 YAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKM  264 (413)
Q Consensus       185 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~  264 (413)
                      .++++++++++||.+.++. ...+...+.........  ...++|.       ..+++..++.+.+.+++.+++++++..
T Consensus       151 ~~~~~vi~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~p~-------~~~~~~~~~~~~l~~~~~~~i~~~~~~  220 (452)
T PLN03141        151 KIAFEVLVKALISLEPGEE-MEFLKKEFQEFIKGLMS--LPIKLPG-------TRLYRSLQAKKRMVKLVKKIIEEKRRA  220 (452)
T ss_pred             HHHHHHHHHHHcCCCchHH-HHHHHHHHHHHhhhHHh--CccCCCc-------hHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999876432 22232222222221111  1111221       112334455677888888888877654


Q ss_pred             hhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHh
Q 040489          265 KEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRG  344 (413)
Q Consensus       265 ~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~  344 (413)
                      ......  ..+..+.|+++.+++..    +..+++++|.+++.++++||+|||+++++|++++|++||++|+|+++|+++
T Consensus       221 ~~~~~~--~~~~~~~d~l~~ll~~~----~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~  294 (452)
T PLN03141        221 MKNKEE--DETGIPKDVVDVLLRDG----SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMK  294 (452)
T ss_pred             HhccCc--cccCChhhHHHHHHhcC----CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            311100  00011348999888743    345899999999999999999999999999999999999999999999998


Q ss_pred             hhcC----CC--C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          345 VVGE----NE--E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       345 v~g~----~~--~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      +++.    +.  . +++.+||||+|||+|+||+||+++.+.+++..++.+     .+++.++++.|..+.+++-|+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~l-----~g~~IPkG~~V~~~~~~~~~d  365 (452)
T PLN03141        295 LKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEI-----KGYLIPKGWCVLAYFRSVHLD  365 (452)
T ss_pred             HHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCcceeecCCeeE-----CCEEECCCCEEEEehHhccCC
Confidence            8642    11  1 678899999999999999999998654445555554     468899999999888887653


No 27 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=4.8e-44  Score=363.29  Aligned_cols=349  Identities=18%  Similarity=0.171  Sum_probs=246.1

Q ss_pred             cccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcccccCCCcceEe
Q 040489           43 IGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISS  122 (413)
Q Consensus        43 ~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~i~~  122 (413)
                      .||+..+.  .+.++..+.++|++|||||++++|+.++|+|+||+++++|+.+++..|.+++... ....+.  +.++.+
T Consensus       142 ~G~l~~i~--~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~-~~~~~~--g~~l~~  216 (633)
T PLN02738        142 KGSISAVR--GEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAE-ILEFVM--GKGLIP  216 (633)
T ss_pred             cCcHHHhc--CchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHH-HHhhcc--CCceec
Confidence            35544442  3568889999999999999999999999999999999999987766676543211 111111  234543


Q ss_pred             ccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHHHHHHhcCCCCh
Q 040489          123 ASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDE  202 (413)
Q Consensus       123 ~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~  202 (413)
                       .+|+.|+++||.++ ++|+...++.+.+.+.+.++.++++|+.....|   .++|+.+.+..+++|||+.++||.+++.
T Consensus       217 -~dge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g---~~vdl~~~~~~lt~DVI~~~~FG~~~~~  291 (633)
T PLN02738        217 -ADGEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDG---EDVEMESLFSRLTLDIIGKAVFNYDFDS  291 (633)
T ss_pred             -CCcHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcEeHHHHHHHHHHHHHHHHHhCCCccc
Confidence             57999999999875 889999999999999999999999998765444   6899999999999999999999998752


Q ss_pred             ----H-HHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-hh-h-h
Q 040489          203 ----S-QIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESL-SI-K-E  274 (413)
Q Consensus       203 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~~~~-~~-~-~  274 (413)
                          + ....+...................+|.+..+ . ...++..+..+.+..++..+++.++........ .. + .
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-~-~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~  369 (633)
T PLN02738        292 LSNDTGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI-S-PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYM  369 (633)
T ss_pred             cccchHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh-c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccc
Confidence                1 1112222221111110000000112221111 1 112333334444555555665544332110000 00 0 0


Q ss_pred             hhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhcCCCC--C
Q 040489          275 REYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEE--G  352 (413)
Q Consensus       275 ~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g~~~~--~  352 (413)
                      .....++++.|++..     ..+|+++|.++++++++||+||||++|+|++|+|++||++|+|||+|+++++|+...  +
T Consensus       370 ~~~~~dil~~Ll~~~-----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~~~~t~e  444 (633)
T PLN02738        370 NERDPSILHFLLASG-----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIE  444 (633)
T ss_pred             ccccchHHHHHHHcC-----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCHH
Confidence            112237889898742     358999999999999999999999999999999999999999999999999985332  8


Q ss_pred             CCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          353 PKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       353 ~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      ++++||||+|||+|+|||||++|...+++..+..|     .+...++++.|..+.+++-|+
T Consensus       445 dL~kLPYL~AVIkEtLRL~p~~p~~~R~a~~d~~i-----~gy~IPkGT~V~~s~~~ihrd  500 (633)
T PLN02738        445 DMKKLKYTTRVINESLRLYPQPPVLIRRSLENDML-----GGYPIKRGEDIFISVWNLHRS  500 (633)
T ss_pred             HHccCHHHHHHHHHHHhcCCCccccceeeccCceE-----CCEEECCCCEEEecHHHHhCC
Confidence            89999999999999999999999987777665544     578899999998888777653


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=8.4e-44  Score=352.45  Aligned_cols=365  Identities=19%  Similarity=0.218  Sum_probs=255.7

Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCCCCCCCCCCCCcccccccchhhhhc--cCCchHHHHHHHhhcCCeEEEEcCCccEEEE
Q 040489            6 IILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKS--FSEIEPILRNLHSKLGPVVTLFIGPRPAIFI   83 (413)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PgP~~~pl~G~l~~~~~~--~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i   83 (413)
                      .++++.++..+..+++.|...++.  ++||||.++|++||++++...  ..+++.++.+++++||+++++++|++++|++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~--~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv   83 (472)
T PLN02987          6 FLLLLSSLAAIFFLLLRRTRYRRM--RLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFS   83 (472)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCC--CCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEE
Confidence            344444444455555566442222  578999999999999887532  2457888999999999999999999999999


Q ss_pred             eChHHHHHHHHhcCcccccCCCCCCCcccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHH-HHHHHHHHHH
Q 040489           84 ADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHA-RKWVLEILLN  162 (413)
Q Consensus        84 ~dpe~i~~il~~~~~~f~~r~~~~~~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~-~~~~~~~~~~  162 (413)
                      +||+++++++.+++..|.++... ....+++  +.++.+ .+|+.|+++||.+. ++++.+.++.+... +.+.++..++
T Consensus        84 ~~pe~~~~il~~~~~~f~~~~~~-~~~~~lg--~~~l~~-~~g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~  158 (472)
T PLN02987         84 ADPETNRFILQNEGKLFECSYPG-SISNLLG--KHSLLL-MKGNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLD  158 (472)
T ss_pred             eCHHHHHHHHhCCCceEEecCcH-HHHHHhC--cccccc-cCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999887777554321 1224443  235554 47999999999864 55555556554321 1222222223


Q ss_pred             HHHhhccCCCCCcccchHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHH
Q 040489          163 HLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQ  242 (413)
Q Consensus       163 ~l~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~  242 (413)
                      .|   .      .++++.+.+..++++++++++||.+.++.. ..+...+.......    ...++|++.     ..+++
T Consensus       159 ~~---~------~~v~~~~~~~~~t~~vi~~~~fg~~~~~~~-~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~  219 (472)
T PLN02987        159 SW---S------SRVLLMEEAKKITFELTVKQLMSFDPGEWT-ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRR  219 (472)
T ss_pred             hh---c------cceehHHHHHHHHHHHHHHHHcCCCChHHH-HHHHHHHHHHHhhh----hcCCCcCCC-----chHHH
Confidence            22   1      358899999999999999999998764221 12222221111111    112344431     23456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHH
Q 040489          243 FLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQ  322 (413)
Q Consensus       243 ~~~~~~~~~~~i~~~i~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~  322 (413)
                      ..+.++++.+++.++++++++.....      .+...|+++.+++..     ..+++++|.++++++++||+|||+++++
T Consensus       220 ~~~~~~~~~~~~~~~i~~r~~~~~~~------~~~~~d~l~~ll~~~-----~~~~~~ei~~~~~~l~~Ag~~tta~~l~  288 (472)
T PLN02987        220 AIQARTKVAEALTLVVMKRRKEEEEG------AEKKKDMLAALLASD-----DGFSDEEIVDFLVALLVAGYETTSTIMT  288 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhcc------CcccccHHHHHHhcC-----CCCCHHHHHHHHHHHHHhccchHHHHHH
Confidence            66677888888999998876543111      011238999999743     2489999999999999999999999999


Q ss_pred             HHHHHHhhChHHHHHHHHHHHhhhcC---CC--C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccc
Q 040489          323 WIMANLVKHPHVQETVYTEIRGVVGE---NE--E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESF  396 (413)
Q Consensus       323 w~~~~La~~P~vq~Kl~eEi~~v~g~---~~--~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~  396 (413)
                      |+++.|++||++|+|+++|++++.+.   +.  . +++.+|||++||++||||+|||++...+++.+++.+     .+++
T Consensus       289 ~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~~R~~~~d~~~-----~G~~  363 (472)
T PLN02987        289 LAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEV-----KGYT  363 (472)
T ss_pred             HHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCccccCCCCeeE-----CCEE
Confidence            99999999999999999999998752   11  1 778899999999999999999998665555555443     4688


Q ss_pred             cccccccceeeeeeec
Q 040489          397 WNKSTVVEATYINIVR  412 (413)
Q Consensus       397 ~~~~~~~~~~~~~~~~  412 (413)
                      .++++.|..+.+++-|
T Consensus       364 ip~Gt~v~~~~~~~~~  379 (472)
T PLN02987        364 IPKGWKVFASFRAVHL  379 (472)
T ss_pred             ECCCCEEEEehHHhhC
Confidence            8888888777666543


No 29 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.5e-40  Score=328.26  Aligned_cols=343  Identities=15%  Similarity=0.156  Sum_probs=240.5

Q ss_pred             cccccccchhhhhccCCchHHHHHHHhhcC-CeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCC-CCcccccCC
Q 040489           39 NLPVIGNLQWLLKSFSEIEPILRNLHSKLG-PVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPL-PTSKIVSSN  116 (413)
Q Consensus        39 ~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG-~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~-~~~~~~~~~  116 (413)
                      ..++.|++....   .+.++++.++.++++ .+++++.++.  ++++||+.+++|+.++...|.+..... ....+++  
T Consensus        48 ~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g--  120 (502)
T PLN02426         48 RAYLTASWAKDF---DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG--  120 (502)
T ss_pred             CCCccHHHHHhc---ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC--
Confidence            355778876643   235667777888887 5677765554  899999999999987766675432111 0112222  


Q ss_pred             CcceEeccCChhHHHHHHHHhhhhcCHHHHhHHH--HHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHHHHH
Q 040489          117 QHNISSASYGTTWRLFRRNLSAEILHPSRVKSYK--HARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLM  194 (413)
Q Consensus       117 ~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~  194 (413)
                       .++.+ .+|+.|+++||.+. +.|+..+++.+.  +.+++..+.+++.|.+....+ .+.++|+.++++.+++|+|+++
T Consensus       121 -~gi~~-~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~vd~~~~~~~~t~dvi~~~  196 (502)
T PLN02426        121 -RGIFN-VDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDG-EGAVLDLQDVFRRFSFDNICKF  196 (502)
T ss_pred             -Cceee-cCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCceEcHHHHHHHHHHHHHHHH
Confidence             35644 57999999999874 889999998874  567777788888887654221 1157999999999999999999


Q ss_pred             HhcCCCChH----HHHHHHHHHHHHHHHhcCCcccccccc---cchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 040489          195 CFGDKLDES----QIKKIENVQRTQLLAFGNFNILNFWPR---LSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEE  267 (413)
Q Consensus       195 ~fG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~---l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~  267 (413)
                      +||.+++..    ...++...+......... .....+|+   +..++..+..++..+..+.+.+++.++|+++++..  
T Consensus       197 ~fG~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~--  273 (502)
T PLN02426        197 SFGLDPGCLELSLPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLG--  273 (502)
T ss_pred             HhCCCCcccCCCCCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcc--
Confidence            999987421    111222222111110000 00111121   11122223345556667778888888888775431  


Q ss_pred             hhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhc
Q 040489          268 ESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG  347 (413)
Q Consensus       268 ~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g  347 (413)
                      .       ....|+++.+++..       .+++++.+++.++++||+||||++++|++|+|++||++|+|+++|+++++|
T Consensus       274 ~-------~~~~dll~~ll~~~-------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~  339 (502)
T PLN02426        274 F-------SASKDLLSRFMASI-------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMG  339 (502)
T ss_pred             c-------CCcchHHHHHHhcC-------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhC
Confidence            0       11238999998743       267899999999999999999999999999999999999999999999988


Q ss_pred             CCC---C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          348 ENE---E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       348 ~~~---~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      ++.   . +++++||||+|||+||||+|||+|+..+++..+....    .+.+.++++.|....+++-|+
T Consensus       340 ~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~~r~~~~d~~~~----~G~~Ip~Gt~V~~~~~~~~rd  405 (502)
T PLN02426        340 PNQEAASFEEMKEMHYLHAALYESMRLFPPVQFDSKFAAEDDVLP----DGTFVAKGTRVTYHPYAMGRM  405 (502)
T ss_pred             CCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCcceeeccCCCcC----CCcEECCCCEEEEchHHhcCC
Confidence            532   2 8889999999999999999999999876666553322    367889999998888887663


No 30 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=2.1e-38  Score=312.38  Aligned_cols=344  Identities=15%  Similarity=0.136  Sum_probs=230.3

Q ss_pred             CCCCCCCcccccccchhhhh--ccCCchHHHHHHHhhcCC-eEEEEcCCccE-------EEEeChHHHHHHHHh----cC
Q 040489           32 NLPPGPFNLPVIGNLQWLLK--SFSEIEPILRNLHSKLGP-VVTLFIGPRPA-------IFIADRSLAHKALVQ----NG   97 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~--~~~~~~~~~~~~~~kyG~-i~~~~~g~~~~-------v~i~dpe~i~~il~~----~~   97 (413)
                      +.|||+.|||++|...++..  ...++..++.+..+|||+ ||+++++|.|+       |+++||+.++.+|.+    +.
T Consensus        17 ~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~   96 (480)
T PLN02648         17 REIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKR   96 (480)
T ss_pred             CCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcccc
Confidence            56899999999999988765  344567899999999999 99999988666       999999999999974    44


Q ss_pred             cccccCCCCCCCcccccCCC-cceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcc
Q 040489           98 AIFADRPRPLPTSKIVSSNQ-HNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVP  176 (413)
Q Consensus        98 ~~f~~r~~~~~~~~~~~~~~-~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  176 (413)
                      ..|......  ...+++.+. .++ +..+|+.|+++||.+. +.|++ .++.|.+.+.+.++.+++.|......+   .+
T Consensus        97 ~~~~~~~~~--~~~l~G~~~~~s~-~~~~g~~H~r~Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~---~~  168 (480)
T PLN02648         97 DVFTGTYMP--STAFTGGYRVLSY-LDPSEPKHAKLKSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAELAKK---GK  168 (480)
T ss_pred             ccceeeecc--CccccCCceeeee-cCCCCchHHHHHHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhC---CC
Confidence            434433221  223554320 033 3357999999999876 78884 778899999999999999996542223   46


Q ss_pred             cchHHHHHHHHHHHHHHHHhcCCCChHHHHH-HHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHH
Q 040489          177 VRVLDHFQYAMFCLLVLMCFGDKLDESQIKK-IENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLV  255 (413)
Q Consensus       177 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~  255 (413)
                      +|+.+.++.+++|++++++||.+.+...... +..........       ..+|.....               +...++
T Consensus       169 vdv~~~~~~lt~~vi~~~lfG~~~~~~~l~~~~~~~~~~~~~~-------~~~p~~~~~---------------l~~~~~  226 (480)
T PLN02648        169 AEFNDPLDQMAFNFLCKALTGKDPSETALGSDGPALIQKWLAL-------QLAPLASTG---------------LPHVLE  226 (480)
T ss_pred             ccccchHHHHHHHHHHHHHcCCCcchhhhccchhHHHHHHHHH-------HhhHHHHcC---------------chHHHH
Confidence            9999999999999999999998765421111 11111111100       001110000               000011


Q ss_pred             HHHHHH-H-H--hhhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHH-HhhcccccHHHHHHHHHHHHhh
Q 040489          256 PLIRAR-K-K--MKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSE-FLNAGTDTTSTALQWIMANLVK  330 (413)
Q Consensus       256 ~~i~~r-~-~--~~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~-~l~AG~dTTa~tl~w~~~~La~  330 (413)
                      +++.++ + .  .......  .-.+.-.+.++.+++...  + ..++++|++++++. ..++|++||+++++|++|+|++
T Consensus       227 ~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~~--~-~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~  301 (480)
T PLN02648        227 ELLLHTFPLPFFLVKSDYD--KLYDFFRASATEALDLAE--K-FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGR  301 (480)
T ss_pred             HHhhcccCCchhhhhccHH--HHHHHHHHHHHHHHHHHH--h-cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc
Confidence            111000 0 0  0000000  000000122334444321  1 23999999999875 4467777778899999999999


Q ss_pred             ChH-HHHHHHHHHHhhhcC-C-C-C-CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccce
Q 040489          331 HPH-VQETVYTEIRGVVGE-N-E-E-GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEA  405 (413)
Q Consensus       331 ~P~-vq~Kl~eEi~~v~g~-~-~-~-~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~  405 (413)
                      ||+ +|+|+++|++++++. + . . +++.+|||++|||+|+||+|||+++..+++.+++.+... +.++..++++.|..
T Consensus       302 ~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~-~~g~~IpkG~~V~~  380 (480)
T PLN02648        302 AGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESH-DAAFEIKKGEMLFG  380 (480)
T ss_pred             CCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecC-CceEEECCCCEEEE
Confidence            995 999999999999863 2 1 2 788999999999999999999999999998887766443 24678888887776


Q ss_pred             eeeeee
Q 040489          406 TYINIV  411 (413)
Q Consensus       406 ~~~~~~  411 (413)
                      ..+++-
T Consensus       381 ~~~~~h  386 (480)
T PLN02648        381 YQPLVT  386 (480)
T ss_pred             ChHHHh
Confidence            655443


No 31 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.7e-32  Score=251.67  Aligned_cols=341  Identities=17%  Similarity=0.169  Sum_probs=230.7

Q ss_pred             CCCCCCCc-ccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCC-CCCCC
Q 040489           32 NLPPGPFN-LPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRP-RPLPT  109 (413)
Q Consensus        32 ~~~PgP~~-~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~-~~~~~  109 (413)
                      +.||--+| +|++|....+.   +++.+++.+..+|||+||++.++|+.+.++.+|+...-++..+-..++-+. .....
T Consensus        31 ~~PPli~gwiP~lG~a~~fg---k~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFG---KDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CCCcccccCcchhhHHHHhc---cCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            47887776 58999999885   578999999999999999999999999999999999999954311111010 00012


Q ss_pred             cccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHH-HHhhccCCCCCcccchHHHHHHHHH
Q 040489          110 SKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNH-LKSESKNGDRPVPVRVLDHFQYAMF  188 (413)
Q Consensus       110 ~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~vd~~~~~~~~~~  188 (413)
                      .+.++.   ++.....+...-.+.+.+ ...+....+++|.+.+.++...+.+. |.+   .    ...|....+.++++
T Consensus       108 ~~vFg~---~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s----~~~d~l~~~~~~ii  176 (486)
T KOG0684|consen  108 TPVFGK---GVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE---S----GETDGLYTFCRLII  176 (486)
T ss_pred             hhhcCC---CccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc---c----cchhHhhhhhHHHh
Confidence            333432   232222234444555554 46778889999999887766665554 221   2    24454444544444


Q ss_pred             HHHHHHHhcCCCChHHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 040489          189 CLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEE  268 (413)
Q Consensus       189 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~~  268 (413)
                      =.+++++.|.....+..........++...+..  .-..||.   .++....++..++++.+.+.+.+.+.+|++...+ 
T Consensus       177 ~tAs~~ll~~e~r~~~d~~~a~l~~dLd~~F~~--~d~~FP~---~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~-  250 (486)
T KOG0684|consen  177 FTASRLLLGGEVRDQLDADVAKLYHDLDQGFQP--FDFLFPY---NLPIPLLRRRDRARKKISKIFSKIILDRRASISK-  250 (486)
T ss_pred             hhhHHHhhhhhhhhhhcchHHHHHHHHhccccc--hHhhccc---CCCcchhhhHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence            445555555433222111111222222222222  1123442   1122233444467777777787877777654311 


Q ss_pred             hhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhcC
Q 040489          269 SLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGE  348 (413)
Q Consensus       269 ~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g~  348 (413)
                              ...|+++.+++ .+ .++.+.|++|+....+.++.||..||+.|..|++++|++|||+++.+++|++.++|+
T Consensus       251 --------~~~dmlq~l~~-~y-~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~  320 (486)
T KOG0684|consen  251 --------WDNDMLQSLME-KY-KDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE  320 (486)
T ss_pred             --------ccHHHHHHHHH-Hh-hcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc
Confidence                    11268888887 33 256789999999999999999999999999999999999999999999999999986


Q ss_pred             CCC----CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhcccccccccccccccc
Q 040489          349 NEE----GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVV  403 (413)
Q Consensus       349 ~~~----~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~  403 (413)
                      ...    +++++||.|+.||+|||||+||++..++-+.++..-.... .++..+++.++
T Consensus       321 ~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~~R~v~~D~tv~~~~-~~Y~Ip~G~~v  378 (486)
T KOG0684|consen  321 KKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSLMRKVHEDLTVPGSD-GEYVIPKGDIV  378 (486)
T ss_pred             cCCCCCHHHHhcchHHHHHHHHHHhcCCchhhHHHhhccceeeccCC-cceecCCCCEE
Confidence            543    8899999999999999999999999988888875554433 77888877765


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97  E-value=1.8e-29  Score=245.63  Aligned_cols=274  Identities=20%  Similarity=0.283  Sum_probs=199.0

Q ss_pred             HHHHHHHhhcCCeEEEEcCCcc--EEEEeChHHHHHHHHhcCcccccCCCCCC----CcccccCCCcceEeccCChhHHH
Q 040489           58 PILRNLHSKLGPVVTLFIGPRP--AIFIADRSLAHKALVQNGAIFADRPRPLP----TSKIVSSNQHNISSASYGTTWRL  131 (413)
Q Consensus        58 ~~~~~~~~kyG~i~~~~~g~~~--~v~i~dpe~i~~il~~~~~~f~~r~~~~~----~~~~~~~~~~~i~~~~~g~~w~~  131 (413)
                      .....+.+.||.++.++..+.-  .+++++++.+++++.+.. .+.+......    ...+++.  ..+ ...+|+.|++
T Consensus        26 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~l-l~~dg~~H~r  101 (411)
T COG2124          26 FFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGD--GSL-LTLDGPEHTR  101 (411)
T ss_pred             hhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccc--cce-eecCCHHHHH
Confidence            3455566778988887764433  799999999999997653 2222211111    1122221  223 3468999999


Q ss_pred             HHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 040489          132 FRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENV  211 (413)
Q Consensus       132 ~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~  211 (413)
                      +||.++ +.|+++.++.|.+.+.+.++.+++.+ ..   +   ...++.+.+..+++++|+ .+||.+.++..  .....
T Consensus       102 ~Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~---~---~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~--~~~~~  170 (411)
T COG2124         102 LRKLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQ---G---GADLVLDFAAELTLRVIA-ELLGVPLEDRP--QLLRW  170 (411)
T ss_pred             HHHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-cc---C---CchhHHHHhhhhhHHHHH-HHhCCCHHHHH--HHHHH
Confidence            999875 88999999999999999988888877 21   1   357788899999999999 99999864421  11111


Q ss_pred             HHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhHHHHHHhccCC
Q 040489          212 QRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLP  291 (413)
Q Consensus       212 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~~~~~~~~~~~~~~~~~~ld~ll~~~~~  291 (413)
                      .......      ..  |...   ....+.+..++.+.+.+++.++|++++...         .+   |+++.|+.+.++
T Consensus       171 ~~~~~~~------~~--~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~~~---------~~---dlls~l~~a~~~  227 (411)
T COG2124         171 SDALLLR------LD--PDLG---PEEPWRRARAARRELDAYLRALIAERRAAP---------RD---DLLSLLLSAEDD  227 (411)
T ss_pred             HHHHHhc------cC--cccC---CcccHHHHHHHHHHHHHHHHHHHHHhccCC---------cc---cHHHHHHHHhhC
Confidence            1111100      00  2111   112245566777888999999999887221         12   788999887643


Q ss_pred             cccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhcCCCCCCCCCChhHHHhhhcccccc
Q 040489          292 EEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIH  371 (413)
Q Consensus       292 ~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g~~~~~~~~~lpyl~avikEtlRl~  371 (413)
                       +++.||++||+++++++++||+|||+++++|++|.|++||++++++++|.+.             ||++++|+|+||+|
T Consensus       228 -~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~-------------~~~~~~v~E~LR~~  293 (411)
T COG2124         228 -GGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR-------------PLLEAVVEETLRLY  293 (411)
T ss_pred             -CCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch-------------HHHHHHHHHHHHhC
Confidence             3337999999999999999999999999999999999999999999998743             89999999999999


Q ss_pred             CCCCCCCcchhhh
Q 040489          372 MHLSLDDPECVRA  384 (413)
Q Consensus       372 pp~~~~~pr~~~~  384 (413)
                      ||++. ++|++++
T Consensus       294 ppv~~-~~R~~~~  305 (411)
T COG2124         294 PPVPL-ARRVATE  305 (411)
T ss_pred             Cchhc-cceeccC
Confidence            99999 8888765


No 33 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=62.91  E-value=25  Score=26.85  Aligned_cols=59  Identities=25%  Similarity=0.305  Sum_probs=40.9

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCC------ccEEEEeChHHHHHHHHh
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGP------RPAIFIADRSLAHKALVQ   95 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~------~~~v~i~dpe~i~~il~~   95 (413)
                      ++||.-..+-++-|++.-.     -.+.+.+++-+||+|.++++|.      ...|+-.|-..++..+..
T Consensus        12 rlppevnriLyirNLp~~I-----TseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   12 RLPPEVNRILYIRNLPFKI-----TSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCChhhheeEEEecCCccc-----cHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            3455555555666665432     2456788889999999999984      457777788888887743


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=61.36  E-value=28  Score=22.51  Aligned_cols=43  Identities=21%  Similarity=0.343  Sum_probs=34.5

Q ss_pred             HHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHH
Q 040489          301 EIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIR  343 (413)
Q Consensus       301 ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~  343 (413)
                      ++..++..++-.|-|-.+-.++-.+.....||+....+-.|++
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            5566677778888888888888888888889999888887763


No 35 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=56.47  E-value=11  Score=25.35  Aligned_cols=24  Identities=29%  Similarity=0.486  Sum_probs=18.4

Q ss_pred             HHHHHhhChHHHHHHHHHHHhhhc
Q 040489          324 IMANLVKHPHVQETVYTEIRGVVG  347 (413)
Q Consensus       324 ~~~~La~~P~vq~Kl~eEi~~v~g  347 (413)
                      .+.+|.+||++.+|+.+.=...+|
T Consensus         5 iV~YLv~nPevl~kl~~g~asLIG   28 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEGEASLIG   28 (57)
T ss_pred             HHHHHHHChHHHHHHHcCCeeEec
Confidence            467899999999999975444444


No 36 
>PRK11677 hypothetical protein; Provisional
Probab=49.45  E-value=17  Score=29.25  Aligned_cols=25  Identities=20%  Similarity=0.325  Sum_probs=20.7

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhcCCC
Q 040489            4 WFIILISISIAALLKAFISVIISPK   28 (413)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~   28 (413)
                      |.+.++++++.+++..++.|+..+.
T Consensus         3 W~~a~i~livG~iiG~~~~R~~~~~   27 (134)
T PRK11677          3 WEYALIGLVVGIIIGAVAMRFGNRK   27 (134)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccch
Confidence            8888889999999999888877444


No 37 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=43.57  E-value=93  Score=22.83  Aligned_cols=50  Identities=12%  Similarity=0.197  Sum_probs=42.6

Q ss_pred             CHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhhhc
Q 040489          298 SEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG  347 (413)
Q Consensus       298 t~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v~g  347 (413)
                      ..+.........++-=+++++....-.+.+-++||+..+++++.+.+-+.
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            34556666778999999999999999999999999999999999877654


No 38 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=38.71  E-value=92  Score=20.19  Aligned_cols=35  Identities=31%  Similarity=0.212  Sum_probs=25.2

Q ss_pred             HHHHHhhcCCeEEEEcCC----ccEEEEeChHHHHHHHH
Q 040489           60 LRNLHSKLGPVVTLFIGP----RPAIFIADRSLAHKALV   94 (413)
Q Consensus        60 ~~~~~~kyG~i~~~~~g~----~~~v~i~dpe~i~~il~   94 (413)
                      +.++.++||+|..+.+..    .-.|-..+++.++....
T Consensus         1 L~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    1 LYKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             ChHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            356788999998877643    35677788998888774


No 39 
>PHA03049 IMV membrane protein; Provisional
Probab=36.77  E-value=73  Score=21.97  Aligned_cols=38  Identities=11%  Similarity=0.143  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHhhhhhcCCCCCCCCCCCCCcccccccch
Q 040489           10 SISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQ   47 (413)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~PgP~~~pl~G~l~   47 (413)
                      .+-+++++..+|..|...+..++.+|.|.-.+..-++.
T Consensus         9 iICVaIi~lIvYgiYnkk~~~q~~~p~~e~ye~~e~~k   46 (68)
T PHA03049          9 IICVVIIGLIVYGIYNKKTTTSQNPPSQEKYEKMEDLK   46 (68)
T ss_pred             HHHHHHHHHHHHHHHhcccccCCCCCChhhccCchhhh
Confidence            33344445557777886665555555555555555543


No 40 
>COG3105 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.52  E-value=33  Score=27.14  Aligned_cols=28  Identities=21%  Similarity=0.418  Sum_probs=22.6

Q ss_pred             CchhHHHHHHHHHHHHHHhhhhhcCCCC
Q 040489            2 EFWFIILISISIAALLKAFISVIISPKY   29 (413)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~   29 (413)
                      |+|.+..+.+.+.++|.+++.|.--++.
T Consensus         6 ~~W~~a~igLvvGi~IG~li~Rlt~~~~   33 (138)
T COG3105           6 MTWEYALIGLVVGIIIGALIARLTNRKL   33 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcchhh
Confidence            6788888988998999998888774443


No 41 
>PF00076 RRM_1:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);  InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=31.82  E-value=1.3e+02  Score=19.98  Aligned_cols=48  Identities=25%  Similarity=0.267  Sum_probs=33.4

Q ss_pred             ccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCC--------ccEEEEeChHHHHHHHH
Q 040489           42 VIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGP--------RPAIFIADRSLAHKALV   94 (413)
Q Consensus        42 l~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~--------~~~v~i~dpe~i~~il~   94 (413)
                      ++||++.-.     -.+.+.++..+||++..+.+..        -..|-..+++.++.++.
T Consensus         2 ~v~nlp~~~-----t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~   57 (70)
T PF00076_consen    2 YVGNLPPDV-----TEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALE   57 (70)
T ss_dssp             EEESETTTS-----SHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHH
T ss_pred             EEcCCCCcC-----CHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHH
Confidence            356666432     2456889999999986554422        24788889999999885


No 42 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=31.00  E-value=67  Score=22.34  Aligned_cols=25  Identities=4%  Similarity=0.159  Sum_probs=20.2

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHH
Q 040489          318 STALQWIMANLVKHPHVQETVYTEI  342 (413)
Q Consensus       318 a~tl~w~~~~La~~P~vq~Kl~eEi  342 (413)
                      +...+-++-.++||||.+.|++.-.
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~m   44 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSLM   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            4556677788999999999998754


No 43 
>PLN03120 nucleic acid binding protein; Provisional
Probab=29.29  E-value=1.6e+02  Score=26.80  Aligned_cols=58  Identities=19%  Similarity=0.208  Sum_probs=42.3

Q ss_pred             ccccchhhhhccCCchHHHHHHHhhcCCeEEEEcC------CccEEEEeChHHHHHHHHhcCcccccCC
Q 040489           42 VIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIG------PRPAIFIADRSLAHKALVQNGAIFADRP  104 (413)
Q Consensus        42 l~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g------~~~~v~i~dpe~i~~il~~~~~~f~~r~  104 (413)
                      ++||+..-     .-.+.+.+++..||+|..+.+.      +...|-..+++.++..+.-++..+.++.
T Consensus         8 fVgNLs~~-----tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~   71 (260)
T PLN03120          8 KVSNVSLK-----ATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQS   71 (260)
T ss_pred             EEeCCCCC-----CCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCce
Confidence            46777543     2355788899999999887762      3468888999999999876666665553


No 44 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=28.93  E-value=17  Score=25.13  Aligned_cols=15  Identities=20%  Similarity=0.184  Sum_probs=12.8

Q ss_pred             CChhHHHhhhccccc
Q 040489          356 RVPLFLFICIPDLRI  370 (413)
Q Consensus       356 ~lpyl~avikEtlRl  370 (413)
                      +.-+++.+|+|++|+
T Consensus        39 r~~fv~~~IkEA~RF   53 (65)
T PF15300_consen   39 RKQFVEMIIKEAARF   53 (65)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            456899999999996


No 45 
>TIGR01260 ATP_synt_c ATP synthase, F0 subunit c. This model describes the subunit c in F1/F0-ATP synthase, a membrane associated multisubunit complex found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The functional role of subunit c, which is the part of F0 cluster, has been delineated in-vitro reconstitution experiments. Overall experimental proof exists that demonstrate the electrochemical gradient is converted into a rotational torque that leads to ATP synthesis.
Probab=27.79  E-value=81  Score=21.29  Aligned_cols=25  Identities=8%  Similarity=0.157  Sum_probs=19.6

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHH
Q 040489          318 STALQWIMANLVKHPHVQETVYTEI  342 (413)
Q Consensus       318 a~tl~w~~~~La~~P~vq~Kl~eEi  342 (413)
                      +...+-++-.++||||.+.+++.-.
T Consensus        10 G~i~~~a~~~iaRqPe~~~~l~~~~   34 (58)
T TIGR01260        10 GILGGKFLESAARQPELKPLLRTTM   34 (58)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            3455667788999999999998653


No 46 
>PRK13466 F0F1 ATP synthase subunit C; Provisional
Probab=26.73  E-value=89  Score=21.76  Aligned_cols=25  Identities=8%  Similarity=0.270  Sum_probs=19.8

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHH
Q 040489          318 STALQWIMANLVKHPHVQETVYTEI  342 (413)
Q Consensus       318 a~tl~w~~~~La~~P~vq~Kl~eEi  342 (413)
                      +...+-++-.++||||.+.|++.-.
T Consensus        20 G~~~~~~~e~vaRqPea~~~l~~~~   44 (66)
T PRK13466         20 GLLVASYLSSTARQPEMQSKLMAGV   44 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            3455667778999999999998754


No 47 
>PF02468 PsbN:  Photosystem II reaction centre N protein (psbN);  InterPro: IPR003398 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection [].   This family represents the low molecular weight transmembrane protein PsbN found in PSII. PsbN may have a role in PSII stability, however its actual function unknown. PsbN does not appear to be essential for photoautotrophic growth or normal PSII function.; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane
Probab=25.26  E-value=82  Score=19.80  Aligned_cols=22  Identities=23%  Similarity=0.031  Sum_probs=11.7

Q ss_pred             CCchhHHHHHHHHHHHHHHhhh
Q 040489            1 MEFWFIILISISIAALLKAFIS   22 (413)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~   22 (413)
                      ||+...+.+++.+.++...-|.
T Consensus         1 Me~a~~~~i~i~~~lv~~Tgy~   22 (43)
T PF02468_consen    1 METATVLAIFISCLLVSITGYA   22 (43)
T ss_pred             CCceeeHHHHHHHHHHHHHhhh
Confidence            7877765555555444333333


No 48 
>PF08675 RNA_bind:  RNA binding domain;  InterPro: IPR014789 This domain corresponds to the RNA binding domain of Poly(A)-specific ribonuclease (PARN). ; GO: 0003723 RNA binding, 0004535 poly(A)-specific ribonuclease activity, 0046872 metal ion binding, 0006402 mRNA catabolic process, 0005634 nucleus, 0005737 cytoplasm; PDB: 3CTR_A 2ROK_A 3D45_B 1WHV_A.
Probab=24.68  E-value=1.8e+02  Score=21.40  Aligned_cols=39  Identities=15%  Similarity=0.238  Sum_probs=31.6

Q ss_pred             hHHHHHHHhhcCCeEEEEcCC-ccEEEEeChHHHHHHHHh
Q 040489           57 EPILRNLHSKLGPVVTLFIGP-RPAIFIADRSLAHKALVQ   95 (413)
Q Consensus        57 ~~~~~~~~~kyG~i~~~~~g~-~~~v~i~dpe~i~~il~~   95 (413)
                      ..-+.+++.-||.|...|+.. +..|.+.+.+.++.++..
T Consensus        22 ~~DI~qlFspfG~I~VsWi~dTSAfV~l~~r~~~~~v~~~   61 (87)
T PF08675_consen   22 TSDIYQLFSPFGQIYVSWINDTSAFVALHNRDQAKVVMNT   61 (87)
T ss_dssp             HHHHHHHCCCCCCEEEEEECTTEEEEEECCCHHHHHHHHH
T ss_pred             hhhHHHHhccCCcEEEEEEcCCcEEEEeecHHHHHHHHHH
Confidence            345778888899999999865 578999999999988743


No 49 
>PRK05880 F0F1 ATP synthase subunit C; Validated
Probab=24.18  E-value=97  Score=22.57  Aligned_cols=25  Identities=16%  Similarity=0.372  Sum_probs=20.8

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHH
Q 040489          318 STALQWIMANLVKHPHVQETVYTEI  342 (413)
Q Consensus       318 a~tl~w~~~~La~~P~vq~Kl~eEi  342 (413)
                      +...+-++-.++||||...+++.-+
T Consensus        29 G~v~~~a~eaiaRqPEa~~~l~~~m   53 (81)
T PRK05880         29 GVAGNALISGVARQPEAQGRLFTPF   53 (81)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHHH
Confidence            5566778889999999999999754


No 50 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=23.52  E-value=58  Score=26.02  Aligned_cols=22  Identities=18%  Similarity=0.259  Sum_probs=9.4

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhc
Q 040489            4 WFIILISISIAALLKAFISVII   25 (413)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~   25 (413)
                      |.+.++.|++++++..++.+..
T Consensus         2 W~l~~iii~~i~l~~~~~~~~~   23 (130)
T PF12273_consen    2 WVLFAIIIVAILLFLFLFYCHN   23 (130)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHH
Confidence            5544444444334443333433


No 51 
>PF05961 Chordopox_A13L:  Chordopoxvirus A13L protein;  InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=23.38  E-value=1.6e+02  Score=20.49  Aligned_cols=27  Identities=19%  Similarity=0.175  Sum_probs=13.9

Q ss_pred             HHHHHHHHHHhhhhhcCCCCCCCCCCC
Q 040489           10 SISIAALLKAFISVIISPKYKTNLPPG   36 (413)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~Pg   36 (413)
                      .+-+++++..+|..|...+..+..+|.
T Consensus         9 ~ICVaii~lIlY~iYnr~~~~q~~~~~   35 (68)
T PF05961_consen    9 IICVAIIGLILYGIYNRKKTTQNTNPS   35 (68)
T ss_pred             HHHHHHHHHHHHHHHhcccccCCCCCc
Confidence            333344455567777755554334443


No 52 
>PF15018 InaF-motif:  TRP-interacting helix
Probab=22.19  E-value=1.1e+02  Score=18.67  Aligned_cols=22  Identities=23%  Similarity=0.353  Sum_probs=15.5

Q ss_pred             hhHHHHHHHHHHHHHHhhhhhc
Q 040489            4 WFIILISISIAALLKAFISVII   25 (413)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~   25 (413)
                      .++=+++++++++..+++..++
T Consensus        10 V~~Yl~~VSl~Ai~LsiYY~f~   31 (38)
T PF15018_consen   10 VVAYLFSVSLAAIVLSIYYIFF   31 (38)
T ss_pred             HHHHHHHHHHHHHHHHHHHhee
Confidence            3455678888888888776655


No 53 
>PRK07558 F0F1 ATP synthase subunit C; Validated
Probab=21.87  E-value=1.2e+02  Score=21.68  Aligned_cols=24  Identities=4%  Similarity=0.237  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHH
Q 040489          318 STALQWIMANLVKHPHVQETVYTE  341 (413)
Q Consensus       318 a~tl~w~~~~La~~P~vq~Kl~eE  341 (413)
                      +...+-++-.++||||.+.|++.=
T Consensus        26 G~~~~~a~e~iaRqPe~~~~l~~~   49 (74)
T PRK07558         26 GNIFGNYLSGALRNPSAADSQFGY   49 (74)
T ss_pred             HHHHHHHHHHHHcCchHHHhHHHH
Confidence            456667788999999999998863


No 54 
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=21.46  E-value=1.8e+02  Score=27.40  Aligned_cols=56  Identities=21%  Similarity=0.193  Sum_probs=37.6

Q ss_pred             ccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCc---------cEEEEeChHHHHHHHHh-cCccccc
Q 040489           42 VIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPR---------PAIFIADRSLAHKALVQ-NGAIFAD  102 (413)
Q Consensus        42 l~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~---------~~v~i~dpe~i~~il~~-~~~~f~~  102 (413)
                      ++|||+.-.     -.+.+.+++.+||+|..+.+...         -.|...+++.+...+.. ++..+.+
T Consensus       273 fV~NL~~~~-----~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~g  338 (352)
T TIGR01661       273 FVYNLSPDT-----DETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGN  338 (352)
T ss_pred             EEeCCCCCC-----CHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECC
Confidence            567776432     24568899999999987765422         27888888888777643 4433433


No 55 
>PRK06876 F0F1 ATP synthase subunit C; Validated
Probab=21.24  E-value=1.3e+02  Score=21.77  Aligned_cols=25  Identities=8%  Similarity=0.123  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHH
Q 040489          318 STALQWIMANLVKHPHVQETVYTEI  342 (413)
Q Consensus       318 a~tl~w~~~~La~~P~vq~Kl~eEi  342 (413)
                      +...+-++-.++||||.+.|++.-.
T Consensus        28 G~~~~~a~~~iaRqPe~~~~l~~~~   52 (78)
T PRK06876         28 GLLGGKFLEGAARQPELIPMLQTKM   52 (78)
T ss_pred             HHHHHHHHHHHHcChHHHHhHHHHH
Confidence            3455567778999999999998753


No 56 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=20.44  E-value=2.4e+02  Score=22.96  Aligned_cols=49  Identities=24%  Similarity=0.309  Sum_probs=35.1

Q ss_pred             ccccchhhhhccCCchHHHHHHHhhcCCeEEEEcC---------CccEEEEeChHHHHHHHHh
Q 040489           42 VIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIG---------PRPAIFIADRSLAHKALVQ   95 (413)
Q Consensus        42 l~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g---------~~~~v~i~dpe~i~~il~~   95 (413)
                      +||||..-.     -.+.+.+++++||+|..+.+.         +--.|-..+++.++.++..
T Consensus        38 fVgnL~~~~-----te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         38 FIGGLSWGT-----DDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             EEeCCCCCC-----CHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            456665432     355789999999998765542         2357888999999999853


No 57 
>PF05393 Hum_adeno_E3A:  Human adenovirus early E3A glycoprotein;  InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=20.24  E-value=1.6e+02  Score=21.64  Aligned_cols=18  Identities=22%  Similarity=0.588  Sum_probs=9.8

Q ss_pred             CchhHHHHHHHHHHHHHH
Q 040489            2 EFWFIILISISIAALLKA   19 (413)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~   19 (413)
                      -+|+.+++.+++.+++.+
T Consensus        34 gm~~lvI~~iFil~Vilw   51 (94)
T PF05393_consen   34 GMWFLVICGIFILLVILW   51 (94)
T ss_pred             chhHHHHHHHHHHHHHHH
Confidence            357666666655344433


Done!