BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>040492
MAEKGGPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPVKDDSQFKHGAVLGK
PQSKKWFCCMQAARAES

High Scoring Gene Products

Symbol, full name Information P value
AT2G04410 protein from Arabidopsis thaliana 1.4e-25
NOI
AT5G55850
protein from Arabidopsis thaliana 1.1e-18
AT5G63270 protein from Arabidopsis thaliana 1.8e-14
AT2G17660 protein from Arabidopsis thaliana 3.0e-14
AT4G35655 protein from Arabidopsis thaliana 4.9e-14
AT5G40645 protein from Arabidopsis thaliana 2.1e-13
AT3G48450 protein from Arabidopsis thaliana 1.4e-12
RIN4
RPM1 interacting protein 4
protein from Arabidopsis thaliana 1.5e-07
AT5G19473 protein from Arabidopsis thaliana 0.00072

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  040492
        (77 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2058284 - symbol:AT2G04410 "AT2G04410" species...   290  1.4e-25   1
TAIR|locus:2176620 - symbol:NOI "AT5G55850" species:3702 ...   225  1.1e-18   1
TAIR|locus:2162002 - symbol:AT5G63270 "AT5G63270" species...   185  1.8e-14   1
TAIR|locus:2827881 - symbol:AT2G17660 "AT2G17660" species...   183  3.0e-14   1
TAIR|locus:4010713927 - symbol:AT4G35655 "AT4G35655" spec...   181  4.9e-14   1
TAIR|locus:505006667 - symbol:AT5G40645 "AT5G40645" speci...   175  2.1e-13   1
TAIR|locus:2101185 - symbol:AT3G48450 "AT3G48450" species...   147  1.4e-12   2
TAIR|locus:2090250 - symbol:RIN4 "RPM1 interacting protei...   121  1.5e-07   1
TAIR|locus:1009023455 - symbol:AT5G19473 "AT5G19473" spec...    85  0.00072   1


>TAIR|locus:2058284 [details] [associations]
            symbol:AT2G04410 "AT2G04410" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] Pfam:PF05627 GO:GO:0005886
            GO:GO:0009506 EMBL:CP002685 InterPro:IPR008700 UniGene:At.366
            UniGene:At.48418 IPI:IPI00522488 RefSeq:NP_178522.2 PRIDE:F4IV84
            EnsemblPlants:AT2G04410.1 GeneID:814981 KEGG:ath:AT2G04410
            OMA:KPQSKKW Uniprot:F4IV84
        Length = 73

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 55/73 (75%), Positives = 63/73 (86%)

Query:     1 MAEKGGPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPVKDDSQF-KHGAVLG 59
             MA+KG PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GGK DSP KD+  + K+G VL 
Sbjct:     1 MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNGEVLE 60

Query:    60 KPQSKKWFCCMQA 72
             KP +KKWFCC++A
Sbjct:    61 KP-AKKWFCCIRA 72


>TAIR|locus:2176620 [details] [associations]
            symbol:NOI "AT5G55850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0010167 "response to nitrate"
            evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0048193
            "Golgi vesicle transport" evidence=RCA] Pfam:PF05627 GO:GO:0005886
            EMBL:CP002688 InterPro:IPR008700 IPI:IPI00938966
            RefSeq:NP_001154782.1 UniGene:At.9528 PRIDE:F4K692
            EnsemblPlants:AT5G55850.2 GeneID:835679 KEGG:ath:AT5G55850
            OMA:KMALLHA Uniprot:F4K692
        Length = 130

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 47/73 (64%), Positives = 52/73 (71%)

Query:     3 EKGGPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPVKD-DSQFKHGAV-LGK 60
             +KG PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGGKP SP K  +   K G     K
Sbjct:    19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSK 78

Query:    61 PQSKKWFCCMQAA 73
             PQ  K    + A+
Sbjct:    79 PQPVKKMALLHAS 91


>TAIR|locus:2162002 [details] [associations]
            symbol:AT5G63270 "AT5G63270" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0010167 "response to nitrate"
            evidence=ISS] Pfam:PF05627 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB008265 InterPro:IPR008700 HOGENOM:HOG000241039
            ProtClustDB:CLSN2687552 IPI:IPI00534667 RefSeq:NP_201132.1
            UniGene:At.65701 PRIDE:Q9FMJ6 EnsemblPlants:AT5G63270.1
            GeneID:836447 KEGG:ath:AT5G63270 TAIR:At5g63270 eggNOG:NOG261071
            InParanoid:Q9FMJ6 OMA:AGPNSLV PhylomeDB:Q9FMJ6
            Genevestigator:Q9FMJ6 Uniprot:Q9FMJ6
        Length = 80

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 45/80 (56%), Positives = 52/80 (65%)

Query:     1 MAE-KGGPLPKFGEWDVNDPASAEGFTVIFNKARNEKKT----GGKPDSPVK------DD 49
             MAE KG PLPKFGEWDVN+PASAEGFTVIF+KA +EKKT    G  P+S V        D
Sbjct:     1 MAENKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSD 60

Query:    50 SQFKHGAVLGKPQSK-KWFC 68
                 H +    P++K KWFC
Sbjct:    61 QNNNHSSQ--NPKAKNKWFC 78


>TAIR|locus:2827881 [details] [associations]
            symbol:AT2G17660 "AT2G17660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0010167
            "response to nitrate" evidence=ISS] Pfam:PF05627 EMBL:CP002685
            GenomeReviews:CT485783_GR InterPro:IPR008700 HOGENOM:HOG000241039
            ProtClustDB:CLSN2683902 EMBL:AF324986 EMBL:BT029201 IPI:IPI00533747
            PIR:H84554 RefSeq:NP_179357.1 UniGene:At.14675 DNASU:816273
            EnsemblPlants:AT2G17660.1 GeneID:816273 KEGG:ath:AT2G17660
            TAIR:At2g17660 eggNOG:NOG314903 InParanoid:Q9SEY4 OMA:AVKKWLC
            PhylomeDB:Q9SEY4 ArrayExpress:Q9SEY4 Genevestigator:Q9SEY4
            Uniprot:Q9SEY4
        Length = 69

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 39/66 (59%), Positives = 44/66 (66%)

Query:     3 EKGGPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPVKDDSQFKHGAVLGKPQ 62
             E G  LPKFGEWDVNDPA+A+GFTVIF+KA  +KKTG    S  K +SQ K      KP 
Sbjct:     5 EAGRALPKFGEWDVNDPATADGFTVIFSKAGEDKKTGR---SSTKTNSQRKQDG--DKPA 59

Query:    63 SKKWFC 68
              KKW C
Sbjct:    60 VKKWLC 65


>TAIR|locus:4010713927 [details] [associations]
            symbol:AT4G35655 "AT4G35655" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF05627 EMBL:CP002687 GenomeReviews:CT486007_GR
            EMBL:AL161587 InterPro:IPR008700 IPI:IPI00846920
            RefSeq:NP_001078495.1 UniGene:At.72154 EnsemblPlants:AT4G35655.1
            GeneID:5008182 KEGG:ath:AT4G35655 TAIR:At4g35655 eggNOG:NOG292349
            HOGENOM:HOG000241039 OMA:KAPSQRK PhylomeDB:A8MS72
            ProtClustDB:CLSN2683902 Genevestigator:A8MS72 Uniprot:A8MS72
        Length = 68

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 40/62 (64%), Positives = 44/62 (70%)

Query:     7 PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGKPDSPVKDDSQFKHGAVLGKPQSKKW 66
             PLPKFGEWDVNDPA+AEGFTVIF+KA  +KKTG    S  K  SQ K   V  KP +KKW
Sbjct:     9 PLPKFGEWDVNDPATAEGFTVIFSKAGEDKKTGR---SSSKAPSQRKQDGV--KP-TKKW 62

Query:    67 FC 68
              C
Sbjct:    63 LC 64


>TAIR|locus:505006667 [details] [associations]
            symbol:AT5G40645 "AT5G40645" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0010167 "response to nitrate"
            evidence=ISS] Pfam:PF05627 EMBL:CP002688 InterPro:IPR008700
            UniGene:At.30275 UniGene:At.46741 EMBL:AY084310 EMBL:DQ447022
            EMBL:BT026018 IPI:IPI00519903 RefSeq:NP_568584.1
            EnsemblPlants:AT5G40645.1 GeneID:834064 KEGG:ath:AT5G40645
            TAIR:At5g40645 InParanoid:Q8LGF0 OMA:KKRFCCF PhylomeDB:Q8LGF0
            ProtClustDB:CLSN2917727 Genevestigator:Q8LGF0 Uniprot:Q8LGF0
        Length = 73

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 38/65 (58%), Positives = 48/65 (73%)

Query:     7 PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG--GKPDSPVKDDSQFKHGAVLGKPQSK 64
             PLPKFGEWDVNDPASAEGFTVIF KAR++KKT   G+  S  +D+++ +      +P +K
Sbjct:    14 PLPKFGEWDVNDPASAEGFTVIFAKARDDKKTNASGRAASQRRDNNKSQD-----EP-TK 67

Query:    65 KWFCC 69
             K FCC
Sbjct:    68 KRFCC 72


>TAIR|locus:2101185 [details] [associations]
            symbol:AT3G48450 "AT3G48450" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0010167 "response to nitrate"
            evidence=ISS] Pfam:PF05627 EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR008700 HOGENOM:HOG000241039 EMBL:AY086630 EMBL:BT024804
            IPI:IPI00548113 RefSeq:NP_566905.1 UniGene:At.35721 PaxDb:Q8LCF4
            PRIDE:Q8LCF4 EnsemblPlants:AT3G48450.1 GeneID:824004
            KEGG:ath:AT3G48450 TAIR:At3g48450 eggNOG:NOG258568
            InParanoid:Q8LCF4 OMA:RNEEPPK PhylomeDB:Q8LCF4
            ProtClustDB:CLSN2687552 Genevestigator:Q8LCF4 Uniprot:Q8LCF4
        Length = 89

 Score = 147 (56.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 26/32 (81%), Positives = 29/32 (90%)

Query:     7 PLPKFGEWDVNDPASAEGFTVIFNKARNEKKT 38
             PLPKFGEWD  +P SAEGFTVIFNKAR++KKT
Sbjct:     9 PLPKFGEWDATNPGSAEGFTVIFNKARDDKKT 40

 Score = 33 (16.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query:    61 PQSKK-WFC 68
             P+SKK W C
Sbjct:    79 PRSKKKWLC 87


>TAIR|locus:2090250 [details] [associations]
            symbol:RIN4 "RPM1 interacting protein 4" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0009816 "defense response to bacterium, incompatible
            interaction" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0006468 "protein phosphorylation" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0009626 "plant-type
            hypersensitive response" evidence=IMP] [GO:0005886 "plasma
            membrane" evidence=IDA;TAS] [GO:0002237 "response to molecule of
            bacterial origin" evidence=RCA;IMP] [GO:0010204 "defense response
            signaling pathway, resistance gene-independent" evidence=IMP]
            [GO:0034051 "negative regulation of plant-type hypersensitive
            response" evidence=IMP] [GO:0019897 "extrinsic to plasma membrane"
            evidence=IDA] [GO:0009617 "response to bacterium" evidence=RCA]
            [GO:0045087 "innate immune response" evidence=RCA] Pfam:PF05627
            GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006468
            GO:GO:0012505 GO:GO:0009626 GO:GO:0002237 GO:GO:0009816
            EMBL:AB026647 GO:GO:0010204 GO:GO:0034051 EMBL:AK117488
            IPI:IPI00517440 RefSeq:NP_189143.2 UniGene:At.43082 PDB:2NUD
            PDBsum:2NUD ProteinModelPortal:Q8GYN5 DIP:DIP-53466N IntAct:Q8GYN5
            STRING:Q8GYN5 PaxDb:Q8GYN5 PRIDE:Q8GYN5 ProMEX:Q8GYN5
            EnsemblPlants:AT3G25070.1 GeneID:822098 KEGG:ath:AT3G25070
            TAIR:At3g25070 eggNOG:NOG330720 HOGENOM:HOG000030266
            InParanoid:Q8GYN5 KO:K13456 OMA:DWDENNP PhylomeDB:Q8GYN5
            ProtClustDB:CLSN2918210 EvolutionaryTrace:Q8GYN5 PMAP-CutDB:Q8GYN5
            Genevestigator:Q8GYN5 GermOnline:AT3G25070 InterPro:IPR008700
            Uniprot:Q8GYN5
        Length = 211

 Score = 121 (47.7 bits), Expect = 1.5e-07, P = 1.5e-07
 Identities = 21/37 (56%), Positives = 29/37 (78%)

Query:     3 EKGGPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTG 39
             EK   +PKFG+WD N+P+SA+G+T IFNK R E+ +G
Sbjct:   143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSG 179


>TAIR|locus:1009023455 [details] [associations]
            symbol:AT5G19473 "AT5G19473" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF05627 EMBL:CP002688 InterPro:IPR008700
            IPI:IPI00657350 RefSeq:NP_001031906.1 UniGene:At.48034
            EnsemblPlants:AT5G19473.1 GeneID:3770676 KEGG:ath:AT5G19473
            OMA:ILTYINC PhylomeDB:F4K158 Uniprot:F4K158
        Length = 99

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 14/31 (45%), Positives = 21/31 (67%)

Query:     7 PLPKFGEWDVNDPASAEGFTVIFNKARNEKK 37
             P+P+FG WD   P  A  ++V+F+KAR  +K
Sbjct:    12 PVPQFGGWDQKGPNDATNYSVVFSKARANRK 42


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.131   0.413    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       77        77   0.00091  102 3  11 23  0.46    29
                                                     29  0.50    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  528 (56 KB)
  Total size of DFA:  111 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.26u 0.07s 9.33t   Elapsed:  00:00:03
  Total cpu time:  9.26u 0.07s 9.33t   Elapsed:  00:00:03
  Start:  Fri May 10 22:01:14 2013   End:  Fri May 10 22:01:17 2013

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