BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040493
(69 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255577161|ref|XP_002529464.1| conserved hypothetical protein [Ricinus communis]
gi|223531080|gb|EEF32930.1| conserved hypothetical protein [Ricinus communis]
Length = 68
Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/69 (81%), Positives = 65/69 (94%), Gaps = 1/69 (1%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
MKKG+HPQMQWISYVTQSGRLMH+MMTKIH+VGKVYHFRARRQ+A+S+GQVAKF+RRY Q
Sbjct: 1 MKKGIHPQMQWISYVTQSGRLMHIMMTKIHHVGKVYHFRARRQLAESLGQVAKFKRRYGQ 60
Query: 61 QADAENNEK 69
+ DAE+ K
Sbjct: 61 E-DAEDTAK 68
>gi|224060393|ref|XP_002300177.1| predicted protein [Populus trichocarpa]
gi|222847435|gb|EEE84982.1| predicted protein [Populus trichocarpa]
Length = 68
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
MKKG+HPQMQWISYVTQ GRLMH MMTKIH+VG VYHFRA+RQMA+S+GQ+AKF+RRY Q
Sbjct: 1 MKKGIHPQMQWISYVTQDGRLMHAMMTKIHHVGNVYHFRAKRQMAESLGQIAKFKRRYGQ 60
Query: 61 QADAENNEK 69
+ +AE+ EK
Sbjct: 61 E-NAEDAEK 68
>gi|77551136|gb|ABA93933.1| hypothetical protein LOC_Os11g31650 [Oryza sativa Japonica Group]
Length = 143
Score = 114 bits (284), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
MKKGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF RRY+Q
Sbjct: 76 MKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFNRRYQQ 135
Query: 61 QADAENNEK 69
+++ EN EK
Sbjct: 136 ESE-ENKEK 143
>gi|222616045|gb|EEE52177.1| hypothetical protein OsJ_34043 [Oryza sativa Japonica Group]
Length = 109
Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
MKKGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF RRY+Q
Sbjct: 42 MKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFNRRYQQ 101
Query: 61 QADAENNEK 69
+++ EN EK
Sbjct: 102 ESE-ENKEK 109
>gi|215694508|dbj|BAG89501.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701402|dbj|BAG92826.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 68
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
MKKGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF RRY+Q
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFNRRYQQ 60
Query: 61 QADAENNEK 69
+++ EN EK
Sbjct: 61 ESE-ENKEK 68
>gi|357156679|ref|XP_003577539.1| PREDICTED: uncharacterized protein LOC100838519 isoform 2
[Brachypodium distachyon]
Length = 68
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 63/68 (92%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
M+KGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 61 QADAENNE 68
+A+ ++
Sbjct: 61 EAEESKDK 68
>gi|195641006|gb|ACG39971.1| hypothetical protein [Zea mays]
gi|413920925|gb|AFW60857.1| hypothetical protein ZEAMMB73_243654 [Zea mays]
Length = 68
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 63/68 (92%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
M+KGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 61 QADAENNE 68
+A+ ++
Sbjct: 61 EAEKSKDK 68
>gi|116830209|gb|ABK28062.1| unknown [Arabidopsis thaliana]
Length = 77
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 57/58 (98%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 58
MKKGLHPQMQWISYVTQSGRLMHVMMT+IH+VGKVYHF A+RQMAQSIGQ+AKF+RR+
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHVGKVYHFGAKRQMAQSIGQIAKFKRRF 58
>gi|186532211|ref|NP_001119440.1| Ribosomal protein L31 [Arabidopsis thaliana]
gi|186532215|ref|NP_001119441.1| Ribosomal protein L31 [Arabidopsis thaliana]
gi|297792983|ref|XP_002864376.1| hypothetical protein ARALYDRAFT_918652 [Arabidopsis lyrata subsp.
lyrata]
gi|98962143|gb|ABF59401.1| unknown protein [Arabidopsis thaliana]
gi|297310211|gb|EFH40635.1| hypothetical protein ARALYDRAFT_918652 [Arabidopsis lyrata subsp.
lyrata]
gi|332009201|gb|AED96584.1| Ribosomal protein L31 [Arabidopsis thaliana]
gi|332009202|gb|AED96585.1| Ribosomal protein L31 [Arabidopsis thaliana]
Length = 76
Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/58 (87%), Positives = 57/58 (98%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 58
MKKGLHPQMQWISYVTQSGRLMHVMMT+IH+VGKVYHF A+RQMAQSIGQ+AKF+RR+
Sbjct: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTRIHHVGKVYHFGAKRQMAQSIGQIAKFKRRF 58
>gi|357446801|ref|XP_003593676.1| hypothetical protein MTR_2g014910 [Medicago truncatula]
gi|355482724|gb|AES63927.1| hypothetical protein MTR_2g014910 [Medicago truncatula]
Length = 81
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 56/58 (96%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 58
MKKG+HPQ QWISYVTQSGRL+HVMMTKIH VGKVYHFRA+RQMA+S+GQ+AKF+RR+
Sbjct: 1 MKKGVHPQKQWISYVTQSGRLLHVMMTKIHPVGKVYHFRAKRQMAESLGQIAKFKRRF 58
>gi|218185821|gb|EEC68248.1| hypothetical protein OsI_36268 [Oryza sativa Indica Group]
Length = 109
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
MKKGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF RRY+Q
Sbjct: 42 MKKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFNRRYQQ 101
Query: 61 QADAENNE 68
+++ EN E
Sbjct: 102 ESE-ENKE 108
>gi|195610630|gb|ACG27145.1| hypothetical protein [Zea mays]
Length = 68
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 64/69 (92%), Gaps = 1/69 (1%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
M+KGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 61 QADAENNEK 69
+A E+ +K
Sbjct: 61 EA-VESKDK 68
>gi|242086801|ref|XP_002439233.1| hypothetical protein SORBIDRAFT_09g002780 [Sorghum bicolor]
gi|241944518|gb|EES17663.1| hypothetical protein SORBIDRAFT_09g002780 [Sorghum bicolor]
Length = 68
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 62/68 (91%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
M+KGLHPQMQWISYVTQSGRL+++MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINIMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 61 QADAENNE 68
A+ ++
Sbjct: 61 VAEESKDK 68
>gi|195628566|gb|ACG36113.1| hypothetical protein [Zea mays]
gi|414591433|tpg|DAA42004.1| TPA: hypothetical protein ZEAMMB73_746475 [Zea mays]
Length = 68
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
M+KGLHPQMQWISYVTQSGRL++ MMTK+++ GKVYH RA+RQMAQS+GQ+AKF+RRYEQ
Sbjct: 1 MRKGLHPQMQWISYVTQSGRLINTMMTKVNHTGKVYHMRAKRQMAQSLGQIAKFKRRYEQ 60
Query: 61 QADAENNEK 69
+A E+ +K
Sbjct: 61 EA-VESKDK 68
>gi|357446807|ref|XP_003593679.1| hypothetical protein MTR_2g014940 [Medicago truncatula]
gi|355482727|gb|AES63930.1| hypothetical protein MTR_2g014940 [Medicago truncatula]
gi|388490718|gb|AFK33425.1| unknown [Medicago truncatula]
Length = 79
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/68 (75%), Positives = 59/68 (86%), Gaps = 4/68 (5%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
MKKG+HPQ QWISYVTQSGRL+HVMMTKIH VGKVYHFRA+RQMA+S+GQ+AKF+RR+
Sbjct: 1 MKKGVHPQKQWISYVTQSGRLLHVMMTKIHPVGKVYHFRAKRQMAESLGQIAKFKRRF-- 58
Query: 61 QADAENNE 68
EN E
Sbjct: 59 --GLENPE 64
>gi|388518627|gb|AFK47375.1| unknown [Lotus japonicus]
Length = 68
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 48/58 (82%), Positives = 55/58 (94%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRY 58
MKKG+HPQ QWISYVTQ+GRLMHVMM KIH VGKVYHFRA+RQMA+S+GQ+AKFRRR+
Sbjct: 1 MKKGVHPQKQWISYVTQTGRLMHVMMAKIHPVGKVYHFRAKRQMAESLGQIAKFRRRF 58
>gi|449443081|ref|XP_004139309.1| PREDICTED: uncharacterized protein LOC101220819 [Cucumis sativus]
Length = 78
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 57/70 (81%), Gaps = 2/70 (2%)
Query: 1 MKKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQ 60
MKKGLHPQ+Q++SYVT SGRLM MMTK HNV KVYH RA+RQM +SIGQ+AKFRRRYE
Sbjct: 1 MKKGLHPQLQYVSYVTPSGRLMSAMMTKAHNVSKVYHLRAKRQMIESIGQLAKFRRRYEM 60
Query: 61 QAD--AENNE 68
D A+N E
Sbjct: 61 GNDENADNAE 70
>gi|222617070|gb|EEE53202.1| hypothetical protein OsJ_36078 [Oryza sativa Japonica Group]
Length = 68
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 37/43 (86%), Gaps = 1/43 (2%)
Query: 25 MMTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQQADAENN 67
MMTKI + GKV+H RA+ +MAQS+GQ+AKF+RRYE +A+ ENN
Sbjct: 1 MMTKISHTGKVHHMRAKHRMAQSLGQIAKFKRRYELEAE-ENN 42
>gi|77555445|gb|ABA98241.1| hypothetical protein LOC_Os12g29470 [Oryza sativa Japonica Group]
Length = 94
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Query: 26 MTKIHNVGKVYHFRARRQMAQSIGQVAKFRRRYEQQADAENN 67
MTKI + GKV+H RA+ +MAQS+GQ+AKF+RRYE +A+ ENN
Sbjct: 1 MTKISHTGKVHHMRAKHRMAQSLGQIAKFKRRYELEAE-ENN 41
>gi|303279192|ref|XP_003058889.1| ribosomal protein L31 [Micromonas pusilla CCMP1545]
gi|226460049|gb|EEH57344.1| ribosomal protein L31 [Micromonas pusilla CCMP1545]
Length = 83
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 2 KKGLHPQMQWISYVTQSGRLMHVMMTKIHNVGKVYH---------FRARRQMAQSIGQVA 52
+KG+HP + IS V G + GK + + ++++ + GQVA
Sbjct: 3 RKGIHPLLYRISIVGTKGATFPWLSAVPFKAGKFFCQTDQDTHVLWTGKKEVKAATGQVA 62
Query: 53 KFRRRYEQQADAE 65
KF+RR++ ++AE
Sbjct: 63 KFKRRFDYLSEAE 75
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.130 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 966,310,074
Number of Sequences: 23463169
Number of extensions: 25422540
Number of successful extensions: 72485
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 72465
Number of HSP's gapped (non-prelim): 20
length of query: 69
length of database: 8,064,228,071
effective HSP length: 41
effective length of query: 28
effective length of database: 7,102,238,142
effective search space: 198862667976
effective search space used: 198862667976
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)