BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040494
(217 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225432460|ref|XP_002278797.1| PREDICTED: uncharacterized protein LOC100252797 [Vitis vinifera]
gi|147777374|emb|CAN73835.1| hypothetical protein VITISV_043470 [Vitis vinifera]
gi|297736948|emb|CBI26149.3| unnamed protein product [Vitis vinifera]
Length = 217
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/216 (82%), Positives = 195/216 (90%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSL 60
++ESYVVVHNIAKRHNVGTLARSA+A GVSE+ILVGRRDFN+FGSHGSTSH+ FRHFHSL
Sbjct: 2 VVESYVVVHNIAKRHNVGTLARSASALGVSELILVGRRDFNSFGSHGSTSHLRFRHFHSL 61
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
DAR FLK KDCDICGVEITDNAV V QHPFK+STAFLLGNEG GLS KECEICDFFVYI
Sbjct: 62 LDARHFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSVKECEICDFFVYI 121
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPES 180
PQYGGGTASLNVTVAASIVLHHFGVWAGFSER RDGNK+VVAER A+QVRR++C E +S
Sbjct: 122 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERIRDGNKFVVAERPAQQVRRNYCTETADS 181
Query: 181 IIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTD 216
IIE R+ RR+NASNGFFD SG+ S S+LLDALF D
Sbjct: 182 IIEERKIRRQNASNGFFDESGSGESPSNLLDALFGD 217
>gi|449432771|ref|XP_004134172.1| PREDICTED: putative TrmH family tRNA/rRNA methyltransferase-like
[Cucumis sativus]
gi|449495429|ref|XP_004159839.1| PREDICTED: putative TrmH family tRNA/rRNA methyltransferase-like
[Cucumis sativus]
Length = 218
Score = 365 bits (938), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 191/216 (88%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLS 61
IESYVVVHNIAKRHNVGT+ARSATAFGVSE+ILVGRRDFNAFGSHGSTSH+ FRHFHSL
Sbjct: 3 IESYVVVHNIAKRHNVGTMARSATAFGVSELILVGRRDFNAFGSHGSTSHLRFRHFHSLL 62
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
DA+ FLK KDCDICGVEITDNAV V QHPFK+STAFLLGNEG GLSAKEC ICDFFVYIP
Sbjct: 63 DAQTFLKEKDCDICGVEITDNAVAVNQHPFKRSTAFLLGNEGTGLSAKECAICDFFVYIP 122
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
QYG GTASLNVTVAASIVLHHFGVWAGF ER RDG+K++VAER RQV+R++C E ESI
Sbjct: 123 QYGVGTASLNVTVAASIVLHHFGVWAGFPERCRDGSKFIVAERPVRQVKRNYCTETEESI 182
Query: 182 IEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+E R+SRRENAS GFFD D S+S+LLD LF D+
Sbjct: 183 MEERKSRRENASKGFFDEGMIDESASNLLDTLFIDQ 218
>gi|385276436|gb|AFI57511.1| NEP-TC [Solanum betaceum]
Length = 221
Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 165/215 (76%), Positives = 190/215 (88%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLS 61
+ES+V+VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHV FRHFHSL+
Sbjct: 7 LESFVLVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVRFRHFHSLA 66
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
DA+ FLK +DCDICGVEIT+NAV + +HPFK+STAFLLGNEG GLS KECEICDFFVYIP
Sbjct: 67 DAKTFLKERDCDICGVEITENAVAINEHPFKRSTAFLLGNEGTGLSTKECEICDFFVYIP 126
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
QYG GTASLNVTVAASIVLH FGVWAGFSERTR+GNK++VAER +Q ++++C E ES+
Sbjct: 127 QYGCGTASLNVTVAASIVLHQFGVWAGFSERTREGNKFIVAERPFKQAKKNYCMETSESV 186
Query: 182 IEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTD 216
E RR ++EN SNGFF+ +G + S S+LLD LF D
Sbjct: 187 AEERRLKKENLSNGFFEDTGKEESPSNLLDTLFDD 221
>gi|224102553|ref|XP_002312722.1| predicted protein [Populus trichocarpa]
gi|118483281|gb|ABK93543.1| unknown [Populus trichocarpa]
gi|222852542|gb|EEE90089.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 355 bits (911), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 172/215 (80%), Positives = 190/215 (88%), Gaps = 2/215 (0%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
ESYVVVHNIAKRHNVGTLARSATAFGV E+ILVGRRDFN+FGSHGSTSH+ FRHFHSLSD
Sbjct: 4 ESYVVVHNIAKRHNVGTLARSATAFGVKELILVGRRDFNSFGSHGSTSHLPFRHFHSLSD 63
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
AR FLK KDCDICGVEITD+A V +HPFK+STAFLLGNEG GLS KECEICDFFVYIPQ
Sbjct: 64 ARNFLKEKDCDICGVEITDSAFPVNEHPFKRSTAFLLGNEGTGLSTKECEICDFFVYIPQ 123
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESII 182
YG GTASLNVTVAASIVLHHFGVWAGFSER+RDG+K++VAER +Q + +C E ESII
Sbjct: 124 YGCGTASLNVTVAASIVLHHFGVWAGFSERSRDGHKFIVAERPVKQGK--YCTETEESII 181
Query: 183 EMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ R+SRRENASNGFFD + N S+SS LD LFT+E
Sbjct: 182 QERKSRRENASNGFFDETRNAESTSSPLDTLFTEE 216
>gi|351725083|ref|NP_001236568.1| uncharacterized protein LOC100305780 [Glycine max]
gi|255626589|gb|ACU13639.1| unknown [Glycine max]
Length = 218
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 167/214 (78%), Positives = 187/214 (87%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
ES+VVVHNIAKRHNVGTLARSATAFGVSE+ILVGRRDFN FGSHGS+SH+ FRHFHSL D
Sbjct: 4 ESFVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNCFGSHGSSSHLRFRHFHSLQD 63
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
AR FLK KD DICGVEIT +++ V QHPF KSTAFLLGNEG GLS KE EIC FFVYIPQ
Sbjct: 64 ARKFLKDKDFDICGVEITTDSLPVNQHPFTKSTAFLLGNEGTGLSPKEIEICGFFVYIPQ 123
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESII 182
YGGGTASLNVTVAASIVLHHFGVWAGF+ER+RDGNK+VVAER +Q R++C E +SII
Sbjct: 124 YGGGTASLNVTVAASIVLHHFGVWAGFTERSRDGNKFVVAERPVKQGGRNYCTETEDSII 183
Query: 183 EMRRSRRENASNGFFDGSGNDVSSSSLLDALFTD 216
E R++RRENA+NGFFD + + SSS+LLDALF D
Sbjct: 184 EERKARRENAANGFFDETESGNSSSNLLDALFVD 217
>gi|297804698|ref|XP_002870233.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316069|gb|EFH46492.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 222
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 187/218 (85%), Gaps = 3/218 (1%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
ESYVVVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+ FRHFHSL +
Sbjct: 5 ESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSLIE 64
Query: 63 ARVFLKS-KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
AR +LK KDCDICGVEI D A V +HPFK++TAFLLGNEG GLSAKE EICDFFVYIP
Sbjct: 65 ARTYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVYIP 124
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
QYG GTASLNVTVAASIVLHHFGVWAGFSER RDG+K++VA+R RQ RR+FCA ESI
Sbjct: 125 QYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEESI 184
Query: 182 IEMRRSRRENASNGFF--DGSGNDVSSSSLLDALFTDE 217
IE R+ R+E+A NGFF DG+GN SSS LLD LF +E
Sbjct: 185 IEERKLRKESAENGFFDDDGNGNGSSSSDLLDGLFLNE 222
>gi|5281018|emb|CAB45991.1| OBP33pep like protein [Arabidopsis thaliana]
gi|7268299|emb|CAB78594.1| OBP33pep like protein [Arabidopsis thaliana]
Length = 278
Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 187/218 (85%), Gaps = 3/218 (1%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
ESYVVVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+ FRHFHSL +
Sbjct: 5 ESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSLIE 64
Query: 63 ARVFLKS-KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
AR +LK KDCDICGVEI D A V +HPFK++TAFLLGNEG GLSAKE EICDFFVYIP
Sbjct: 65 ARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVYIP 124
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
QYG GTASLNVTVAASIVLHHFGVWAGFSER RDG+K++VA+R RQ RR+FCA ES+
Sbjct: 125 QYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEESV 184
Query: 182 IEMRRSRRENASNGFFDGSGND--VSSSSLLDALFTDE 217
IE R+ R+E+A NGFFD +GN+ SSS LLD LF +E
Sbjct: 185 IEERKLRKESAENGFFDDNGNENGSSSSDLLDGLFLNE 222
>gi|357478515|ref|XP_003609543.1| tRNA guanosine-2'-O-methyltransferase [Medicago truncatula]
gi|355510598|gb|AES91740.1| tRNA guanosine-2'-O-methyltransferase [Medicago truncatula]
Length = 218
Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 166/216 (76%), Positives = 191/216 (88%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSL 60
+ ESYVVVHNIAKRHNVGTLARSATAFGVSE+ILVGRRDFN+FG+HGS++H+ FRHFHSL
Sbjct: 2 VFESYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNSFGNHGSSNHLRFRHFHSL 61
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
DA+ FLK KDCDICGVEIT +A+ V QHPFKK+TAFLLGNEG GLS KECEICDFFVYI
Sbjct: 62 QDAKHFLKDKDCDICGVEITHDALPVNQHPFKKNTAFLLGNEGSGLSMKECEICDFFVYI 121
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPES 180
PQYG GTASLNVTVAASIVLH FGVWAGF+ER+RDGNK+VVAER + RR++C E +S
Sbjct: 122 PQYGCGTASLNVTVAASIVLHQFGVWAGFAERSRDGNKFVVAERPVKHGRRNYCTETDDS 181
Query: 181 IIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTD 216
+IE RR+RRENA+NGFF+ + + SSS+LLDALF D
Sbjct: 182 VIEERRARRENAANGFFEEAESSNSSSNLLDALFVD 217
>gi|15234624|ref|NP_193287.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
thaliana]
gi|26449903|dbj|BAC42073.1| OBP33pep like protein [Arabidopsis thaliana]
gi|28827336|gb|AAO50512.1| putative OBP33pep protein [Arabidopsis thaliana]
gi|332658215|gb|AEE83615.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
thaliana]
Length = 222
Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/218 (76%), Positives = 187/218 (85%), Gaps = 3/218 (1%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
ESYVVVHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+ FRHFHSL +
Sbjct: 5 ESYVVVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSLIE 64
Query: 63 ARVFLKS-KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
AR +LK KDCDICGVEI D A V +HPFK++TAFLLGNEG GLSAKE EICDFFVYIP
Sbjct: 65 ARNYLKEEKDCDICGVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVYIP 124
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
QYG GTASLNVTVAASIVLHHFGVWAGFSER RDG+K++VA+R RQ RR+FCA ES+
Sbjct: 125 QYGCGTASLNVTVAASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEESV 184
Query: 182 IEMRRSRRENASNGFFDGSGND--VSSSSLLDALFTDE 217
IE R+ R+E+A NGFFD +GN+ SSS LLD LF +E
Sbjct: 185 IEERKLRKESAENGFFDDNGNENGSSSSDLLDGLFLNE 222
>gi|388495754|gb|AFK35943.1| unknown [Medicago truncatula]
Length = 218
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 164/216 (75%), Positives = 190/216 (87%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSL 60
+ ESYVVVHNIAKRHNVGTLARSATAFGVSE+ILVGRRDFN+FG+HGS++H+ FRHFHSL
Sbjct: 2 VFESYVVVHNIAKRHNVGTLARSATAFGVSELILVGRRDFNSFGNHGSSNHLRFRHFHSL 61
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
DA+ FLK KDCDICGVEIT +A+ V QHPFKK+TAFLLGNEG GLS KECEICDFFVYI
Sbjct: 62 QDAKHFLKDKDCDICGVEITHDALPVNQHPFKKNTAFLLGNEGSGLSMKECEICDFFVYI 121
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPES 180
PQYG GTASLNVTVAASIVLH FGVWAGF+ER+RDGNK+VVAER + RR++C E +S
Sbjct: 122 PQYGCGTASLNVTVAASIVLHQFGVWAGFAERSRDGNKFVVAERPVKHGRRNYCTETDDS 181
Query: 181 IIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTD 216
+IE R+RRENA++GFF+ + + SSS+LLDALF D
Sbjct: 182 VIEEHRARRENAAHGFFEEAESSNSSSNLLDALFVD 217
>gi|255551565|ref|XP_002516828.1| rRNA methylase, putative [Ricinus communis]
gi|223543916|gb|EEF45442.1| rRNA methylase, putative [Ricinus communis]
Length = 216
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 168/217 (77%), Positives = 191/217 (88%), Gaps = 2/217 (0%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSL 60
+IESYV+VHNIAKRHNVGTLARSATAFGV+E+ILVGRRDFNAFGSHGSTSH+ FRHFHSL
Sbjct: 2 VIESYVLVHNIAKRHNVGTLARSATAFGVTELILVGRRDFNAFGSHGSTSHLRFRHFHSL 61
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+AR +LK K+CDICGVEITD A+ V +HPFKKSTAFLLGNEG GLSAKECEICDFFVYI
Sbjct: 62 LNARDYLKEKECDICGVEITDGALPVNEHPFKKSTAFLLGNEGTGLSAKECEICDFFVYI 121
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPES 180
PQYG GTASLNVTVAASIVLHHFGVWAGFSER R+G+K++VA+R +Q R +C E ES
Sbjct: 122 PQYGRGTASLNVTVAASIVLHHFGVWAGFSERIREGSKFIVADRPMKQGR--YCTETEES 179
Query: 181 IIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
IIE R+SR+E+ SNGFFD + N SSS+LLD LF +E
Sbjct: 180 IIEERKSRKEHGSNGFFDETKNGDSSSNLLDILFIEE 216
>gi|1022801|gb|AAA79704.1| OBP33pep, partial [Arabidopsis thaliana]
Length = 210
Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 153/204 (75%), Positives = 173/204 (84%), Gaps = 3/204 (1%)
Query: 17 VGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLKS-KDCDIC 75
VGTLARSATAFGV+E+ILVGRRDFNAFGSHGS SH+ FRHFHSL +AR +LK KDCDIC
Sbjct: 7 VGTLARSATAFGVTELILVGRRDFNAFGSHGSASHIRFRHFHSLIEARNYLKEEKDCDIC 66
Query: 76 GVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASLNVTVA 135
GVEI D A V +HPFK++TAFLLGNEG GLSAKE EICDFFVYIPQYG GTASLNVTVA
Sbjct: 67 GVEIADGASAVNEHPFKRNTAFLLGNEGSGLSAKEYEICDFFVYIPQYGCGTASLNVTVA 126
Query: 136 ASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESIIEMRRSRRENASNG 195
ASIVLHHFGVWAGFSER RDG+K++VA+R RQ RR+FCA ES+IE R+ R+E+A NG
Sbjct: 127 ASIVLHHFGVWAGFSERVRDGSKFIVADRPVRQGRRNFCAGTEESVIEERKLRKESAENG 186
Query: 196 FFDGSGND--VSSSSLLDALFTDE 217
FFD +GN+ SSS LLD LF +E
Sbjct: 187 FFDDNGNENGSSSSDLLDGLFLNE 210
>gi|116791065|gb|ABK25846.1| unknown [Picea sitchensis]
Length = 236
Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/220 (66%), Positives = 174/220 (79%), Gaps = 10/220 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLS 61
+ES+V+VHN+AKRHN+GTL R+ATAFGVSE+ILVGR+DFNAFGSHGST H+NFRHF++L
Sbjct: 1 MESFVIVHNVAKRHNIGTLVRTATAFGVSEVILVGRKDFNAFGSHGSTLHLNFRHFYTLQ 60
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A +LK KD DICGVEI D A+ V +HPFKKSTAFLLGNEG GLS+KE EICD+FVYI
Sbjct: 61 QAHQYLKDKDSDICGVEIADGAIAVHEHPFKKSTAFLLGNEGTGLSSKEMEICDYFVYIS 120
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
QYG GTASLNVTVAASIVLHHF VWAGFSER RDG K++VAE+ ARQVRR+FCAE E I
Sbjct: 121 QYGCGTASLNVTVAASIVLHHFAVWAGFSERMRDGQKFIVAEKPARQVRRNFCAEPIEVI 180
Query: 182 IEMRRSRRENASNGFFDGSG----------NDVSSSSLLD 211
++ R+ ++E S + D D SSS +L+
Sbjct: 181 VKERKDKQEGGSYDWLDDGAIGTRDEVKEKTDASSSYILE 220
>gi|115462009|ref|NP_001054604.1| Os05g0141400 [Oryza sativa Japonica Group]
gi|46391115|gb|AAS90642.1| putative OBP33PEP [Oryza sativa Japonica Group]
gi|113578155|dbj|BAF16518.1| Os05g0141400 [Oryza sativa Japonica Group]
gi|215701017|dbj|BAG92441.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741370|dbj|BAG97865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630148|gb|EEE62280.1| hypothetical protein OsJ_17068 [Oryza sativa Japonica Group]
Length = 224
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 165/206 (80%), Gaps = 1/206 (0%)
Query: 12 AKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLK-SK 70
AKRHNVGTLARSATAFGV+E+++VGRRD +AFGSHG+TSH+ FRHF SL AR +LK +
Sbjct: 19 AKRHNVGTLARSATAFGVAEVVVVGRRDVSAFGSHGATSHLRFRHFASLPLARAYLKDER 78
Query: 71 DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASL 130
CDICGVEIT NA+ VT HPF++STAFL GNEG GLS KECEICDFFVYIPQYGGGTASL
Sbjct: 79 GCDICGVEITHNALPVTAHPFRRSTAFLFGNEGTGLSQKECEICDFFVYIPQYGGGTASL 138
Query: 131 NVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESIIEMRRSRRE 190
NVTVAASIVLHHFGVWAGF ER R+GNK+VVA++ Q R +C + E +IE R+ RRE
Sbjct: 139 NVTVAASIVLHHFGVWAGFPERGREGNKFVVADKPKGQSRGLYCTDSIEEVIEERKMRRE 198
Query: 191 NASNGFFDGSGNDVSSSSLLDALFTD 216
NA + F + ++ S++L + +D
Sbjct: 199 NACDIFEENGSSEHQESNVLGTMLSD 224
>gi|226492595|ref|NP_001151868.1| LOC100285504 [Zea mays]
gi|195650445|gb|ACG44690.1| trmH family tRNA/rRNA methyltransferase [Zea mays]
gi|238006410|gb|ACR34240.1| unknown [Zea mays]
gi|414590800|tpg|DAA41371.1| TPA: putative TrmH family tRNA/rRNA methyltransferase [Zea mays]
Length = 220
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 166/206 (80%), Gaps = 1/206 (0%)
Query: 12 AKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLK-SK 70
AKRHNVGTLARSATAFGV+E+++VGRRD +AFGSHG+TSH+ FRHF SL+ AR +LK +
Sbjct: 15 AKRHNVGTLARSATAFGVAEVVVVGRRDVSAFGSHGATSHLRFRHFVSLALARAYLKDER 74
Query: 71 DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASL 130
CDICGVEITD+A VT HPF++STAFL GNEG GLS KECEICDFFVYIPQYGGGTASL
Sbjct: 75 GCDICGVEITDDAQPVTAHPFRRSTAFLFGNEGTGLSQKECEICDFFVYIPQYGGGTASL 134
Query: 131 NVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESIIEMRRSRRE 190
NVTVAASIVLHHFGVWAGF+ER R+GNK+VVAER R +C + E+++E R+ R+E
Sbjct: 135 NVTVAASIVLHHFGVWAGFTERGREGNKFVVAERPQGHSRGLYCTDSVEAVVEERKMRKE 194
Query: 191 NASNGFFDGSGNDVSSSSLLDALFTD 216
NA + + + + S+ LD +F D
Sbjct: 195 NACDVLEENGCSHLQESNGLDLMFAD 220
>gi|242089459|ref|XP_002440562.1| hypothetical protein SORBIDRAFT_09g003210 [Sorghum bicolor]
gi|241945847|gb|EES18992.1| hypothetical protein SORBIDRAFT_09g003210 [Sorghum bicolor]
Length = 220
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 136/206 (66%), Positives = 165/206 (80%), Gaps = 1/206 (0%)
Query: 12 AKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLKS-K 70
AKRHNVGTLARSATAFGV+E+++VGRRD +AFGSHG+TSH+ FRHF SL+ AR +LK +
Sbjct: 15 AKRHNVGTLARSATAFGVAEVVVVGRRDVSAFGSHGATSHLRFRHFASLALARAYLKEER 74
Query: 71 DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASL 130
CDICGVEIT++A VT HPF +STAFL GNEG GLS KEC+ICDFFVYIPQYGGGTASL
Sbjct: 75 GCDICGVEITEDAKPVTAHPFHRSTAFLFGNEGTGLSQKECDICDFFVYIPQYGGGTASL 134
Query: 131 NVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESIIEMRRSRRE 190
NVTVAASIVLHHFGVWAGF ER R+GNK++VA+R R +C + E++IE R+ R+E
Sbjct: 135 NVTVAASIVLHHFGVWAGFPERGREGNKFIVADRPQGHSRGLYCTDSIEAVIEERKMRKE 194
Query: 191 NASNGFFDGSGNDVSSSSLLDALFTD 216
NA + + G+ S+ LD +FTD
Sbjct: 195 NACDILEENGGSHPQESNGLDLMFTD 220
>gi|302792753|ref|XP_002978142.1| hypothetical protein SELMODRAFT_107928 [Selaginella moellendorffii]
gi|300154163|gb|EFJ20799.1| hypothetical protein SELMODRAFT_107928 [Selaginella moellendorffii]
Length = 220
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 157/199 (78%), Gaps = 4/199 (2%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLS 61
+E YVVVHN+AKRHN+GTLARSATAFGVSEMILVG++DFN+FGSHGS HV FRHFHSL
Sbjct: 1 MECYVVVHNVAKRHNIGTLARSATAFGVSEMILVGKKDFNSFGSHGSAHHVRFRHFHSLL 60
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+AR +LK CDICGVEIT+ AV V +HPF++STAFLLGNEG GLS KE EICDFF YIP
Sbjct: 61 EARDYLKGIGCDICGVEITEGAVAVHKHPFQRSTAFLLGNEGTGLSPKEMEICDFFTYIP 120
Query: 122 QYGGGTASLNVTVAASIVLHHFG--VWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
Q G GTASLNVTVAASIVLHHF +WAGF ER RDG K++VA+R AR R+ PE
Sbjct: 121 QVGCGTASLNVTVAASIVLHHFSGKLWAGFPERERDGQKFIVADRPAR--RQGLICSNPE 178
Query: 180 SIIEMRRSRRENASNGFFD 198
+ + R+ ++ N S + D
Sbjct: 179 EVTQARQQKKLNGSTDWLD 197
>gi|302766003|ref|XP_002966422.1| hypothetical protein SELMODRAFT_86381 [Selaginella moellendorffii]
gi|300165842|gb|EFJ32449.1| hypothetical protein SELMODRAFT_86381 [Selaginella moellendorffii]
Length = 220
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/199 (66%), Positives = 157/199 (78%), Gaps = 4/199 (2%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLS 61
+E YVVVHN+AKRHN+GTLARSATAFGVSEMILVG++DFN+FGSHGS HV FRHFHSL
Sbjct: 1 MECYVVVHNVAKRHNIGTLARSATAFGVSEMILVGKKDFNSFGSHGSAHHVRFRHFHSLL 60
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+AR +LK CDICGVEIT+ AV V +HPF++STAFLLGNEG GLS KE EICDFF YIP
Sbjct: 61 EARDYLKGIGCDICGVEITEGAVAVHKHPFQRSTAFLLGNEGTGLSPKEMEICDFFTYIP 120
Query: 122 QYGGGTASLNVTVAASIVLHHFG--VWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
Q G GTASLNVTVAASIVLHHF +WAGF ER RDG K++VA+R AR R+ PE
Sbjct: 121 QVGSGTASLNVTVAASIVLHHFSGKLWAGFPERERDGQKFIVADRPAR--RQGLICSNPE 178
Query: 180 SIIEMRRSRRENASNGFFD 198
+ + R+ ++ + S + D
Sbjct: 179 EVTQARQQKKLSGSTDWLD 197
>gi|168056477|ref|XP_001780246.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668300|gb|EDQ54910.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 190
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 125/189 (66%), Positives = 149/189 (78%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
ES+++VHN+AKRHN+GTLARSATAFGVSE+ILVGR+DFNAFGSHG+T H+ FRHF +L
Sbjct: 2 ESFLLVHNVAKRHNLGTLARSATAFGVSEIILVGRKDFNAFGSHGATLHLQFRHFQTLPA 61
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +LK K+ ICGVEIT+ A V ++PF STAF+LGNEG GLS KE EICDFFVYIPQ
Sbjct: 62 AVKYLKDKNVSICGVEITEGAAGVHKYPFTGSTAFVLGNEGTGLSDKEMEICDFFVYIPQ 121
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESII 182
G GTASLNVTVAASIVLH F VWA F ER RDG K+VVA+R R+ R+ C + P +
Sbjct: 122 NGPGTASLNVTVAASIVLHQFAVWAEFPERERDGQKFVVADRPVRRGPRNMCPDDPAEVS 181
Query: 183 EMRRSRREN 191
E RR + E+
Sbjct: 182 ERRRLKSES 190
>gi|125550794|gb|EAY96503.1| hypothetical protein OsI_18405 [Oryza sativa Indica Group]
Length = 168
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 122/140 (87%), Gaps = 1/140 (0%)
Query: 12 AKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLK-SK 70
AKRHNVGTLARSATAFGV+E+++VGRRD +AFGSHG+TSH+ FRHF SL AR +LK +
Sbjct: 17 AKRHNVGTLARSATAFGVAEVVVVGRRDVSAFGSHGATSHLRFRHFASLPLARAYLKDER 76
Query: 71 DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASL 130
CDICGVEIT NA+ VT HPF++STAFL GNEG GLS KECEICDFFVYIPQYGGGTASL
Sbjct: 77 GCDICGVEITHNALPVTAHPFRRSTAFLFGNEGTGLSQKECEICDFFVYIPQYGGGTASL 136
Query: 131 NVTVAASIVLHHFGVWAGFS 150
NVTVAASIVLHHFG +G +
Sbjct: 137 NVTVAASIVLHHFGGKSGLA 156
>gi|414590801|tpg|DAA41372.1| TPA: hypothetical protein ZEAMMB73_855271 [Zea mays]
Length = 166
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
Query: 12 AKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLK-SK 70
AKRHNVGTLARSATAFGV+E+++VGRRD +AFGSHG+TSH+ FRHF SL+ AR +LK +
Sbjct: 15 AKRHNVGTLARSATAFGVAEVVVVGRRDVSAFGSHGATSHLRFRHFVSLALARAYLKDER 74
Query: 71 DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASL 130
CDICGVEITD+A VT HPF++STAFL GNEG GLS KECEICDFFVYIPQYGGGTASL
Sbjct: 75 GCDICGVEITDDAQPVTAHPFRRSTAFLFGNEGTGLSQKECEICDFFVYIPQYGGGTASL 134
Query: 131 NVTVAASIVLHHFG 144
NVTVAASIVLHHFG
Sbjct: 135 NVTVAASIVLHHFG 148
>gi|195644564|gb|ACG41750.1| hypothetical protein [Zea mays]
Length = 163
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
Query: 12 AKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLK-SK 70
AKRHNVGTLARSATAFGV+E+++VGRRD +AFGSHG+TSH+ FRHF SL+ AR +LK +
Sbjct: 15 AKRHNVGTLARSATAFGVAEVVVVGRRDVSAFGSHGATSHLRFRHFVSLALARAYLKDER 74
Query: 71 DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASL 130
CDICGVEITD+A VT HPF++STAFL GNEG GLS KECEICDFFVYIPQYGGGTASL
Sbjct: 75 GCDICGVEITDDAQPVTAHPFRRSTAFLFGNEGTGLSQKECEICDFFVYIPQYGGGTASL 134
Query: 131 NVTVAASIVLHHFG 144
NVTVAASIVLHHFG
Sbjct: 135 NVTVAASIVLHHFG 148
>gi|195628230|gb|ACG35945.1| hypothetical protein [Zea mays]
Length = 163
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 120/134 (89%), Gaps = 1/134 (0%)
Query: 12 AKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLK-SK 70
AKRHNVGTLARSATAFGV+E+++VGRRD +AFGSHG+TSH+ FRHF SL+ AR +LK +
Sbjct: 15 AKRHNVGTLARSATAFGVAEVVVVGRRDVSAFGSHGATSHLRFRHFVSLALARAYLKDER 74
Query: 71 DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASL 130
CDICGVEITD+A VT HPF++STAFL GNEG GLS KECEICDFFVYIPQYGGGTASL
Sbjct: 75 GCDICGVEITDDAQPVTAHPFRRSTAFLFGNEGTGLSQKECEICDFFVYIPQYGGGTASL 134
Query: 131 NVTVAASIVLHHFG 144
NVTVAASIVLHHFG
Sbjct: 135 NVTVAASIVLHHFG 148
>gi|384249828|gb|EIE23309.1| hypothetical protein COCSUDRAFT_66262 [Coccomyxa subellipsoidea
C-169]
Length = 246
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 122/164 (74%), Gaps = 1/164 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
Y++VHN++KRHN+GTL RSA AF V+E+ LVG R FN FGSHGS +VN+RHF SL +
Sbjct: 31 YLIVHNVSKRHNIGTLVRSAAAFSVTEVCLVGARQFNTFGSHGSADYVNYRHFPSLQECC 90
Query: 65 VFLKS-KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
+LK K C I GVEI ++A + HPF TAF+LGNEG GLS ++ ++CD FVYIPQY
Sbjct: 91 HYLKQDKGCRIMGVEIAEDAQPIHAHPFSGPTAFMLGNEGSGLSPQQVQLCDAFVYIPQY 150
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSAR 167
G GTASLNVTVAASIVL HF WAG++ER R G KY V ER R
Sbjct: 151 GAGTASLNVTVAASIVLQHFAAWAGYAERPRSGAKYDVGERPPR 194
>gi|145341523|ref|XP_001415856.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576079|gb|ABO94148.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 207
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 129/179 (72%), Gaps = 2/179 (1%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
Y + HN+AK+HN+GT+AR TAFGV ++L+G R FN FGSHG+ HV+F HF SL +AR
Sbjct: 2 YFLAHNVAKKHNIGTMARCCTAFGVKSLVLIGSRQFNTFGSHGADGHVHFEHFDSLEEAR 61
Query: 65 VFLK-SKDC-DICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
LK + C I GVEI D+A + HPF +TAF++GNEG G++ + ICD FVYIPQ
Sbjct: 62 EKLKGERGCTQILGVEIVDDARAIESHPFTGNTAFIMGNEGHGMTEAQKAICDGFVYIPQ 121
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
YG GTASLNV+VAASIV+HHF WAG+ ER+R+G K++VAER R +R E PE +
Sbjct: 122 YGPGTASLNVSVAASIVMHHFASWAGYEERSREGEKFIVAERPQRTRKRGEVGESPEQV 180
>gi|159479268|ref|XP_001697715.1| hypothetical protein CHLREDRAFT_105431 [Chlamydomonas reinhardtii]
gi|158274083|gb|EDO99867.1| predicted protein [Chlamydomonas reinhardtii]
Length = 198
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 126/174 (72%), Gaps = 1/174 (0%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
SY++ H+++KRHN+GT+ RSATAFGV E+ LVG R FN FGSHGS +HV FRHF +L+
Sbjct: 1 SYIITHSVSKRHNIGTIVRSATAFGVKEVCLVGSRQFNTFGSHGSDAHVAFRHFDTLAKC 60
Query: 64 RVFLKS-KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
LK + C + GVEI + A+ V +HPF TAFLLGNEG G++ ++ +CD FVYIPQ
Sbjct: 61 VQHLKEVEGCRVLGVEICEGALPVQEHPFTGPTAFLLGNEGQGMTDRQMALCDGFVYIPQ 120
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAE 176
+G GTASLNV VAASIVLHHF +WA + ER R+G K+VVAE+ R R E
Sbjct: 121 HGAGTASLNVAVAASIVLHHFAIWAAYPERQREGYKFVVAEKPQRTTARGVVRE 174
>gi|255079034|ref|XP_002503097.1| predicted protein [Micromonas sp. RCC299]
gi|226518363|gb|ACO64355.1| predicted protein [Micromonas sp. RCC299]
Length = 204
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 129/179 (72%), Gaps = 2/179 (1%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
Y +VHNIAK+HNVGT+AR ATAFGV ++L+G + +N FG GS++HV+F H+ +LSDAR
Sbjct: 1 YFLVHNIAKKHNVGTIARCATAFGVRSVVLIGAKSYNTFGCKGSSNHVDFVHYPTLSDAR 60
Query: 65 VFLKSKD--CDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
V L + I GVEI D AV + HPF ++TAF+ GNEG GL+ ++ ICD FVYI Q
Sbjct: 61 VGLMERMGVTKILGVEICDGAVPIETHPFAQNTAFIAGNEGDGLTKQQKAICDGFVYIRQ 120
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
+G GTASLNV VA+++V+HHF +WAG+ ER R+G KYVV ER R +R + P+ +
Sbjct: 121 HGVGTASLNVAVASALVMHHFALWAGYRERAREGEKYVVGERKMRTSKRGVIGDDPDEV 179
>gi|307106389|gb|EFN54635.1| hypothetical protein CHLNCDRAFT_17312, partial [Chlorella
variabilis]
Length = 195
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/195 (49%), Positives = 133/195 (68%), Gaps = 1/195 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
Y++ +N++K+HN+GTLAR ATAF V ++ LVG R FN FG+HGS+ +V+F H+++L +
Sbjct: 1 YLITYNVSKKHNLGTLARCATAFNVRQLCLVGSRQFNTFGAHGSSEYVDFCHYNTLDECC 60
Query: 65 VFLK-SKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK +K C + GVEI D A V + PF+ +TAF+LGNEG GL+ K+ +CD F+YIPQY
Sbjct: 61 QDLKDNKGCTVVGVEIIDGAQPVHRFPFRGNTAFMLGNEGQGLNEKQLALCDSFLYIPQY 120
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESIIE 183
G GTASLNV VAASIVLHHF + AG+ ER R+G K+ + ER R R E +
Sbjct: 121 GAGTASLNVAVAASIVLHHFALHAGYGERQREGYKFTLGERPQRTAPRGVVPLSGEELAA 180
Query: 184 MRRSRRENASNGFFD 198
R+ R+ A +G D
Sbjct: 181 ERQRRQRAAQDGDAD 195
>gi|303283642|ref|XP_003061112.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457463|gb|EEH54762.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 184
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 132/188 (70%), Gaps = 7/188 (3%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
Y +VHNIAK+HNVGT+AR ATAFGV ++LVG + +N FG G+++HV+F H+ SL AR
Sbjct: 1 YFIVHNIAKKHNVGTIARCATAFGVRAVVLVGAKAYNTFGCKGASNHVDFLHYPSLHAAR 60
Query: 65 VFLKSKDC---DICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
L + I GVEI D+AV + + PF+ STAF++GNEG GL+ + ICD FVYI
Sbjct: 61 EGLTAPPHRVRKIMGVEIMDDAVAIDERPFEGSTAFIMGNEGDGLTDAQKAICDGFVYIR 120
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI 181
Q+G GTASLNV+VAASIV+HHF +WA + ER R+G K+VVAER R +R + PE +
Sbjct: 121 QHGVGTASLNVSVAASIVMHHFALWAAYPERGREGEKFVVAERRLRTAKRGVVGDAPEEV 180
Query: 182 IEMRRSRR 189
R+RR
Sbjct: 181 ----RARR 184
>gi|308799147|ref|XP_003074354.1| OBP33pep like protein (ISS) [Ostreococcus tauri]
gi|116000525|emb|CAL50205.1| OBP33pep like protein (ISS) [Ostreococcus tauri]
Length = 249
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 139/219 (63%), Gaps = 11/219 (5%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
E YVV HN+AKRHN+G + RS TAF V ++L+G R FNAFGS G+ +HV F H+ +L +
Sbjct: 32 EMYVVAHNVAKRHNLGMMMRSCTAFDVKALVLIGSRKFNAFGSQGADAHVAFEHYETLRE 91
Query: 63 ARVFLKSKD--CDICGVEITDNAVDVTQHPFKKSTAFLLGNE------GMGLSAKECEIC 114
AR L +K + GVEI ++A + HPF +TAF++GNE G GL+ ++ IC
Sbjct: 92 AREGLTAKRGVTRVLGVEIVESAEPIESHPFTGNTAFVMGNEARLDAQGHGLTEQQKAIC 151
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFC 174
D FVYI QYG GTASLNV+VAASIV+H F +WA + ER R G K+VVAER R +R
Sbjct: 152 DGFVYIRQYGPGTASLNVSVAASIVMHQFALWANYQERERVGEKFVVAERPLRTRKRGEI 211
Query: 175 AEKPESIIEMRRSRRENASNGFFDGSGNDVSSSSLLDAL 213
E PE E+R R + + + D S+ L++AL
Sbjct: 212 GEDPE---EVRARRAAARAARELENARKDEDSTPLIEAL 247
>gi|302843184|ref|XP_002953134.1| hypothetical protein VOLCADRAFT_63297 [Volvox carteri f.
nagariensis]
gi|300261521|gb|EFJ45733.1| hypothetical protein VOLCADRAFT_63297 [Volvox carteri f.
nagariensis]
Length = 182
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/158 (57%), Positives = 115/158 (72%), Gaps = 3/158 (1%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+++ H+++KRHN+GT+ RSATAFGV E+ LVG R FN FGSHGS +HV F+HF +L
Sbjct: 25 FIITHSVSKRHNIGTIVRSATAFGVKEVCLVGSRQFNTFGSHGSDAHVAFKHFDTLQQCV 84
Query: 65 VFLKS-KDCDICGVEITDNAVDVTQHPFKKS--TAFLLGNEGMGLSAKECEICDFFVYIP 121
LK + C + G+EI + A+ V +HPF S TAFLLGNEG GLS ++ +CD FVYIP
Sbjct: 85 QHLKDVEGCRVLGIEICEGALPVHEHPFTGSSPTAFLLGNEGQGLSERQMALCDGFVYIP 144
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKY 159
Q+G GTASLNV VAASIVLHHF VW + ER R G K+
Sbjct: 145 QHGPGTASLNVAVAASIVLHHFAVWGAYPERERHGFKF 182
>gi|67596101|ref|XP_666055.1| OBP33pep like protein [Cryptosporidium hominis TU502]
gi|54656965|gb|EAL35825.1| OBP33pep like protein [Cryptosporidium hominis]
Length = 213
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 112/161 (69%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSL 60
+ E Y+V+ NI+KR N GTL RSA FGVSE+++VG + FG+ G+ H++ + ++
Sbjct: 13 LPEFYLVLSNISKRQNFGTLLRSACGFGVSEVLVVGEKKLMTFGNKGTLPHLSLTQYENI 72
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+K K+ D+ G+EI+D + + HPFK+STAFLLGNEG GLS K ++CD+ ++I
Sbjct: 73 DQVVDIIKEKEMDLVGIEISDESRPIYPHPFKRSTAFLLGNEGTGLSQKYIKLCDYLIHI 132
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVV 161
P YG GTASLNV +A SIV HHF +WA F+E ++ G KY++
Sbjct: 133 PLYGNGTASLNVAIAGSIVFHHFAIWAKFTESSKKGAKYII 173
>gi|126644106|ref|XP_001388189.1| tRNA/rRNA methyltransferase-like protein [Cryptosporidium parvum
Iowa II]
gi|51951322|gb|AAU15130.1| tRNA/rRNA methyltransferase-like protein [Cryptosporidium parvum]
gi|126117262|gb|EAZ51362.1| tRNA/rRNA methyltransferase-like protein, putative [Cryptosporidium
parvum Iowa II]
Length = 214
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 112/161 (69%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSL 60
+ E Y+V+ NI+KR N GTL RSA FGVSE+++VG + FG+ G+ H++ + ++
Sbjct: 13 LPEFYLVLSNISKRQNFGTLLRSACGFGVSEVLVVGEKKLMTFGNKGTLPHLSLTQYENI 72
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+K K+ D+ G+EI+D + + HPFK+STAFLLGNEG GLS K ++CD+ ++I
Sbjct: 73 DQVVDIIKEKEMDLVGIEISDESRPIYPHPFKRSTAFLLGNEGTGLSQKYIKLCDYLIHI 132
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVV 161
P YG GTASLNV +A SIV HHF +WA F+E ++ G KY++
Sbjct: 133 PLYGNGTASLNVAIAGSIVFHHFAIWAKFTESSKKGAKYII 173
>gi|209878796|ref|XP_002140839.1| RNA methyltransferase, TrmH family protein [Cryptosporidium muris
RN66]
gi|209556445|gb|EEA06490.1| RNA methyltransferase, TrmH family protein [Cryptosporidium muris
RN66]
Length = 199
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 111/159 (69%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
Y+++ NI+KR N G L RSA FGVSE++ VG+R FG+ G+ +++ ++ +L +
Sbjct: 15 YLILMNISKRQNFGALLRSACGFGVSEVLAVGKRKLRTFGNKGTLPYISLTYYDTLEEVV 74
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +++ DI G+EI +N++ V HPF++STAF+LGNEG GLS ++ +ICD+ VYIP YG
Sbjct: 75 EIVHAEEMDIVGIEINENSLPVYPHPFRRSTAFILGNEGTGLSQRQIDICDYLVYIPMYG 134
Query: 125 GGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAE 163
GTASLNV +A SI+ HHF +WA F E R G KY + E
Sbjct: 135 SGTASLNVAIAGSILFHHFALWAKFDESHRTGQKYTLGE 173
>gi|300121517|emb|CBK22036.2| unnamed protein product [Blastocystis hominis]
Length = 215
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/161 (48%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ Y+V+ NI+K HN+G + RSA AFG+ E+I++G+ +GSHG+ H+ R F ++ +
Sbjct: 13 DGYLVLANISKNHNIGNMVRSACAFGMKEVIVIGQPKLMLYGSHGTAHHIKIRKFGTMEE 72
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A+ + K + +CGVEI A DV HPF+ +TA ++GNEG G++ K+ +CD FVYIPQ
Sbjct: 73 AKAWFKENNIIVCGVEIVPEAEDVRTHPFRGNTAIMMGNEGSGMNEKQLGMCDHFVYIPQ 132
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGF--SERTRDGNKYVV 161
+ GTASLNV VAASIV+HHF WAG+ +ER +D K+VV
Sbjct: 133 FSQGTASLNVNVAASIVMHHFSTWAGYEEAEREKDRAKFVV 173
>gi|412988267|emb|CCO17603.1| predicted protein [Bathycoccus prasinos]
Length = 228
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 126/197 (63%), Gaps = 5/197 (2%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
E + +V N++K+HN+GT+ R+ TAF V M LVG +N FGS GS +HV H +L +
Sbjct: 10 EMHFIVQNVSKKHNIGTICRNCTAFDVKSMHLVGSAHYNVFGSQGSDAHVKIEHHPTLEE 69
Query: 63 ARVFLKSKDC--DICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
R ++ +I GVEIT+ +VDV ++P+K +TAF+LGNEG G++ ++ +ICD FVYI
Sbjct: 70 CRETMRETYNVEEILGVEITEESVDVAKYPWKGNTAFVLGNEGHGMTPQQKKICDGFVYI 129
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFC---AEK 177
QYG GTASLNV VA+SIV+H F + +SER R+G K++VAE+ + +
Sbjct: 130 KQYGAGTASLNVAVASSIVMHEFAKYHNYSERAREGEKFIVAEKPLSRRPKGVAVGVGWT 189
Query: 178 PESIIEMRRSRRENASN 194
PE + R RR A N
Sbjct: 190 PEIARKEREMRRRQAEN 206
>gi|70950868|ref|XP_744721.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524790|emb|CAH77939.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 233
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 118/194 (60%), Gaps = 7/194 (3%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGR--RDFNAFGSHGSTSHVNFRHFHSLSD 62
YVV++NI K+ N+G + RS AF VSE+ +VGR ++ + FGS G+ ++ R+F ++ +
Sbjct: 28 YVVIYNIGKKKNIGNIVRSCVAFNVSEIFVVGRNKKETSFFGSMGTHGYIKIRYFTNMIE 87
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ +L + D + EIT+ ++ +T+ PF K AFL GNEG G+S + +CD +YIPQ
Sbjct: 88 LKQYLNNNDILLYACEITNQSIPITEQPFNKDIAFLFGNEGTGISEQIINMCDKIIYIPQ 147
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSAR-----QVRRSFCAEK 177
YG GTASLNV+V+ +I+L +F VWA + E GNK+++ E+ + R E
Sbjct: 148 YGNGTASLNVSVSCAIILQNFAVWANYIEVKIKGNKFIIQEQENKLNNYLNPSRELLKEI 207
Query: 178 PESIIEMRRSRREN 191
+ I R + EN
Sbjct: 208 DDKRIMRERKKTEN 221
>gi|403368571|gb|EJY84124.1| hypothetical protein OXYTRI_18139 [Oxytricha trifallax]
Length = 262
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 12/208 (5%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG----RRDFNAFGSHGSTSHVNFRHFH 58
+SY+++ N+ K+ N GTL RSA AF V ++ ++ ++ + FGS G+ + NF++F
Sbjct: 51 QSYLLMFNVQKQKNFGTLIRSAAAFNVKQVFIIDSQPTKKRLSCFGSQGTATKTNFQYFG 110
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L D + F + ICG+EI A + HPFK T F+LGNEG GL+ + ICD F+
Sbjct: 111 GLKDVKQFCTERSISICGIEIMPEAQPIHAHPFKGDTLFMLGNEGSGLNKNQIAICDQFI 170
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCA--- 175
YIPQY TASLNV +A SI+ HF WAG+ E+ G K+ + +RQ + S A
Sbjct: 171 YIPQYTDKTASLNVAIAGSIIFQHFAQWAGYQEQKIVGYKFEEGDAQSRQ-KGSLIATVG 229
Query: 176 ----EKPESIIEMRRSRRENASNGFFDG 199
P E R R+ ++ DG
Sbjct: 230 FAALNDPVKKREQREQRKNQDNDEVLDG 257
>gi|82541768|ref|XP_725101.1| RNA methyltransferase [Plasmodium yoelii yoelii 17XNL]
gi|23479981|gb|EAA16666.1| RNA methyltransferase, TrmH family, putative [Plasmodium yoelii
yoelii]
Length = 227
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGR--RDFNAFGSHGSTSHVNFRHFHSLSD 62
YV+++NI K+ N+G + RS AF VSE+ +VGR ++ + FGS G+ ++ R+F ++ +
Sbjct: 20 YVIIYNIGKKKNIGNIVRSCVAFNVSEIFVVGRNKKETSFFGSMGTHGYIRIRYFSNMIE 79
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPF--KKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ +L + + G EIT+ ++ +T+ PF K TAFL GNEG G+S + ++CD +YI
Sbjct: 80 LKEYLNDNNILLYGCEITNQSIPITKQPFVKNKDTAFLFGNEGTGISDQIIKMCDKIIYI 139
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPES 180
PQYG G ASLNV+V+ +I+L F VWA + E GNK+++ ER + +E+
Sbjct: 140 PQYGNGIASLNVSVSCAIILQTFAVWANYIEVDIKGNKFIIQERQNKLNNYLNPSEELIK 199
Query: 181 IIEMRRSRRE 190
I +R+ RE
Sbjct: 200 EINDKRTIRE 209
>gi|145485115|ref|XP_001428566.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395653|emb|CAK61168.1| unnamed protein product [Paramecium tetraurelia]
Length = 231
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 110/169 (65%), Gaps = 11/169 (6%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD-----------FNAFGSHGSTSH 51
E Y+++HNIAK N+GT+ R+A AF ++++ ++G++ F+ FG+HG+
Sbjct: 6 EGYLLLHNIAKPKNIGTIIRNAAAFNLTKVFMIGKQGQTKKKFQIAEGFSFFGNHGTYDQ 65
Query: 52 VNFRHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKEC 111
+NF F++L +A+ + + +CGVEI + + ++ +PFK +T F LGNEG GL +
Sbjct: 66 MNFHLFNNLKEAKEYFVLNNIFVCGVEIGEGSQNIITNPFKGNTVFFLGNEGTGLIPEHK 125
Query: 112 EICDFFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYV 160
+CD FVYIPQY TASLNV VA+ I+ HHF WAGF+E+ +G K++
Sbjct: 126 ALCDHFVYIPQYTQKTASLNVGVASGIIFHHFAQWAGFTEQQVEGEKFL 174
>gi|221054155|ref|XP_002261825.1| SpoU rRNA Methylase [Plasmodium knowlesi strain H]
gi|193808285|emb|CAQ38988.1| SpoU rRNA Methylase, putative [Plasmodium knowlesi strain H]
Length = 264
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%), Gaps = 3/168 (1%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHSL 60
+ YV ++NI K+ N+G++ RS AFGVS++ +V R+ + N FG G+ ++ +F ++
Sbjct: 27 QMYVAIYNIGKKKNIGSIVRSCVAFGVSKIFVVSRKRNEINFFGQMGTCKYITIEYFSNM 86
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPF-KKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ R+ L + + + EITD A+ VT+ PF K TAFL GNEG G++ + CD +Y
Sbjct: 87 KELRIHLANNNILLYACEITDRAIAVTRTPFVNKDTAFLFGNEGTGINDETLSYCDKIIY 146
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSAR 167
IPQYG GT SLNV+V+ +I+LHHF VWA + E G K+V+ + +++
Sbjct: 147 IPQYGNGTCSLNVSVSCAIILHHFAVWANYPEVEISGKKFVLNKCASK 194
>gi|118376426|ref|XP_001021395.1| RNA methyltransferase, TrmH family protein [Tetrahymena
thermophila]
gi|89303162|gb|EAS01150.1| RNA methyltransferase, TrmH family protein [Tetrahymena thermophila
SB210]
Length = 252
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 26/202 (12%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGR------------------------RDF 40
Y+++HNI K++N+G + RSA+AF ++ L+ + ++F
Sbjct: 20 YLLLHNIGKKNNMGIIIRSASAFNFEKVFLISKNEDIFNEEVEGDERKRKRVLHRVVKEF 79
Query: 41 NAFGSHGSTSHVNFRHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLG 100
FG+HG+ + + F F +L +A+ + + +CGVEIT ++ V HPF+ T FL+G
Sbjct: 80 QMFGNHGTQAQMQFDVFKNLKEAKQYFVQNNIKVCGVEITPDSKSVVTHPFQGDTVFLMG 139
Query: 101 NEGMGLSAKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKY- 159
NEG GL +ICD FVYIPQY TASLNV+ AASI+ HHF +WAG+ E G K+
Sbjct: 140 NEGAGLIEAHKKICDHFVYIPQYTNKTASLNVSCAASIIFHHFALWAGYQESQIFGEKFQ 199
Query: 160 -VVAERSARQVRRSFCAEKPES 180
A +Q + S E+ ES
Sbjct: 200 DQAAIEGEQQEKDSQSDEEKES 221
>gi|389582780|dbj|GAB65517.1| RNA methyltransferase domain containing protein [Plasmodium
cynomolgi strain B]
Length = 228
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 110/173 (63%), Gaps = 3/173 (1%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHSL 60
+ YV ++NI K+ N+G++ RS AF VS++ +V R+ + N FG G+ ++ +F S+
Sbjct: 50 QMYVAIYNIGKKKNIGSIVRSCVAFRVSKIFVVSRKKNEVNFFGHMGTCEYITIEYFCSM 109
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPF-KKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ + L+ D + G EIT +A+ VT+HPF K TAFL GNEG G++ + CD +Y
Sbjct: 110 KELKTHLRENDILLYGCEITGSAIPVTRHPFVNKDTAFLFGNEGTGINDETLSYCDKIIY 169
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRS 172
IPQYG GT SLNV+V+ +I+LHHF VWA + E G K+V+ + + V++
Sbjct: 170 IPQYGNGTCSLNVSVSCAIILHHFAVWADYPEVAISGKKFVLNKCAISLVKQQ 222
>gi|294945420|ref|XP_002784671.1| RNA methyltransferase, putative [Perkinsus marinus ATCC 50983]
gi|239897856|gb|EER16467.1| RNA methyltransferase, putative [Perkinsus marinus ATCC 50983]
Length = 222
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHS 59
+SY+++ N+ KR N G L RSATAFGV+E+ +VG ++ FG+ G+T H F F +
Sbjct: 14 KSYLLICNVGKRQNWGQLLRSATAFGVTEVFVVGAKKMKELALFGNQGTTLHATFEFFDT 73
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+++A+ LK + +CGVEI ++ + ++ T F+LGNEG G++ K+ CD F Y
Sbjct: 74 IAEAKEELKRRGITLCGVEIHPSSEPIQDMHWRGDTCFMLGNEGTGMTDKQIAACDQFTY 133
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
I QY TASLNV VA SIVLHHF + +G R G K+V E + R + +
Sbjct: 134 IQQYTKATASLNVAVAGSIVLHHFALASGMPVAERKGQKFVTDEGRGKLDRYEHPTDYEQ 193
Query: 180 SIIEMRRSRR 189
+IE +R R
Sbjct: 194 QVIEEKRRLR 203
>gi|124802753|ref|XP_001347584.1| RNA methyltransferase, putative [Plasmodium falciparum 3D7]
gi|23495166|gb|AAN35497.1| RNA methyltransferase, putative [Plasmodium falciparum 3D7]
Length = 257
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 117/191 (61%), Gaps = 3/191 (1%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHS 59
I++YVV++NI K+ NVG + RS AF V ++ +VG+R + N FG+ G+ ++ +F +
Sbjct: 51 IKTYVVIYNIGKKKNVGCIVRSCVAFNVHKIFIVGKRKKEINFFGNMGTYDYITIEYFDN 110
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFK-KSTAFLLGNEGMGLSAKECEICDFFV 118
+ + + +L D + EI+ NA+ +T +P++ K TAFL GNEG G+ +ICD +
Sbjct: 111 IYELKEYLTKHDILLYACEISVNALSITTNPYEHKDTAFLFGNEGTGIHDNVLKICDKII 170
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKP 178
YIPQYG GTASLNV+V+ +I+L +F VWA + + K++V ++ ++ + +
Sbjct: 171 YIPQYGKGTASLNVSVSCAIILQNFAVWANYEQTEIKNKKFIVQKKMSKLQKYLNPTDDM 230
Query: 179 ESIIEMRRSRR 189
I +RS R
Sbjct: 231 LKQIHFKRSLR 241
>gi|156081941|ref|XP_001608463.1| RNA methyltransferase domain containing protein [Plasmodium vivax
Sal-1]
gi|148801034|gb|EDL42439.1| RNA methyltransferase domain containing protein [Plasmodium vivax]
Length = 214
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 71/170 (41%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHSLSD 62
YV ++NI K+ N+G++ RS AF VS++ +V R+ N FG G+ ++ +F S+ +
Sbjct: 2 YVAIYNIGKKKNIGSIVRSCVAFRVSKIFVVSRKKNQVNFFGHMGTCEYITIEYFSSMKE 61
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFK-KSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+ L+ + EIT +AV VT+ PF+ K TAFL GNEG G++ + CD VYIP
Sbjct: 62 LKTHLRDNGILLYACEITSSAVPVTRRPFENKDTAFLFGNEGTGINDETLSYCDKVVYIP 121
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRR 171
QYG GT SLNV+V+ +I+LHHF VWA + E G K+V+ + A ++ R
Sbjct: 122 QYGNGTCSLNVSVSCAIILHHFAVWADYPEVGISGKKFVL-NKCATKLER 170
>gi|68067975|ref|XP_675907.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495350|emb|CAI05586.1| conserved hypothetical protein [Plasmodium berghei]
Length = 188
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 107/172 (62%), Gaps = 8/172 (4%)
Query: 25 TAFGVSEMILVG--RRDFNAFGSHGSTSHVNFRHFHSLSDARVFLKSKDCDICGVEITDN 82
AF VSE+ +VG ++ + FGS G+ ++ R+F ++ + + +L + + + G EIT+
Sbjct: 1 VAFNVSEIFVVGQNKKKTSFFGSMGTHGYIKIRYFTNMIELKEYLNNNNILLYGCEITNQ 60
Query: 83 AVDVTQHPF--KKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASLNVTVAASIVL 140
++ +T+HPF K TAFL GNEG G+S + ++CD +YIPQYG G ASLNV+V+ +I+L
Sbjct: 61 SIPITKHPFVKNKDTAFLFGNEGTGISEQIIKMCDQIIYIPQYGNGIASLNVSVSCAIIL 120
Query: 141 HHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESIIEM--RRSRRE 190
F VW+ + E GNK+++ ER + ++ E I E+ +R+ RE
Sbjct: 121 QSFAVWSDYIEVDIKGNKFIIQERENK--LNTYLNPSEELIKEINDKRTTRE 170
>gi|348670793|gb|EGZ10614.1| hypothetical protein PHYSODRAFT_414447 [Phytophthora sojae]
Length = 152
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 90/145 (62%), Gaps = 2/145 (1%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFR--HFHSLSD 62
+++++N+ K N+ + SA+AFGV E+ +VG++ F+ ++ R +L D
Sbjct: 4 FLILNNVQKNKNIKNMLVSASAFGVEEVFVVGQKKFDLQEQEPFLRSLSCRVTRLATLKD 63
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
R + I GVEI +A + PF TAF++GNEG G+S+ + ICD FVYIPQ
Sbjct: 64 CRAHCTERGIRIVGVEIMHDAKSIADQPFSGDTAFIMGNEGSGMSSAQVAICDDFVYIPQ 123
Query: 123 YGGGTASLNVTVAASIVLHHFGVWA 147
YGGGTASLNVTVAASI+L F +WA
Sbjct: 124 YGGGTASLNVTVAASIILQSFALWA 148
>gi|294899352|ref|XP_002776605.1| rRNA methylase, putative [Perkinsus marinus ATCC 50983]
gi|239883647|gb|EER08421.1| rRNA methylase, putative [Perkinsus marinus ATCC 50983]
Length = 211
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+SY+++ N+ KR N G L RSATAFGV+E+ +VG + G+ ++++
Sbjct: 14 KSYLLICNVGKRQNWGQLLRSATAFGVTEVFVVGAKKMKELALFGNQD--------TIAE 65
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ LK + +CGVEI ++ + ++ T F+LGNEG G++ K+ CD F YI Q
Sbjct: 66 VKEELKRRGITLCGVEIHPSSEPIQDMHWRGDTCFMLGNEGTGMTDKQIAACDQFTYIQQ 125
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESII 182
Y TASLNV +A SIV HHF + +G R G K+V E + R + + +I
Sbjct: 126 YTKATASLNVAIAGSIVSHHFAMASGMPVAERKGQKFVTDEGRGKLDRYEHPTDYEQQVI 185
Query: 183 EMRRSRR 189
E +R R
Sbjct: 186 EEKRRLR 192
>gi|348664661|gb|EGZ04505.1| hypothetical protein PHYSODRAFT_343219 [Phytophthora sojae]
Length = 223
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 115/210 (54%), Gaps = 13/210 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLS 61
+E ++V+ N + R N+GT R+A+AFG +++++VG F G+H + +V+ H + +
Sbjct: 11 VELFMVLSNKSGRQNLGTYLRTASAFGTTQVLVVGSERFGTHGAHRAQKYVDVVHMYDFA 70
Query: 62 DARVFLKSKDCDICGV-EITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+AR +LK+K C I G+ + + + P++ ++AF++ NE GLS ++ ICD FV++
Sbjct: 71 EARAYLKAKGCTIFGLSKQSQESYAAHATPYEGTSAFVIDNEFPGLSEEQRAICDHFVHV 130
Query: 121 PQYG-----GGTASLNVTVAASIVLHHFGVWAGFS----ERTRDGNKYVVAERSARQVRR 171
P +G +L+ TV +I LHHF +A F E T K+V+ A
Sbjct: 131 PFHGEQMEASSELTLDTTVVTAITLHHFTAFAQFPVRAIEATSTQGKFVL---DAYPTFD 187
Query: 172 SFCAEKPESIIEMRRSRRENASNGFFDGSG 201
++ E MR ++R NA +G +G G
Sbjct: 188 PTQNKRGEEKAAMREAKRANADDGLSEGDG 217
>gi|219117827|ref|XP_002179701.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408754|gb|EEC48687.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 169
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN----------AFGSHGSTSHVNF 54
Y+V+ NI+KR N+ L A AFG ++++VG++ F+ + H ++
Sbjct: 7 YLVITNISKRPNIRALLELAAAFGCDKVLVVGQQKFDISPKGTDIPRSIREHVERGGLHI 66
Query: 55 RHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEIC 114
+ S FL S + GVEI +A + + K TAFL+GNEG G++ K + C
Sbjct: 67 ERYSSWEACINFLSSHGIRLVGVEIHVDARPIEAYLDYKDTAFLMGNEGQGINEKHMKSC 126
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHFGVW 146
D FV IPQYGGGTASLNV VAASIVLH F W
Sbjct: 127 DAFVTIPQYGGGTASLNVYVAASIVLHSFHQW 158
>gi|323456726|gb|EGB12592.1| hypothetical protein AURANDRAFT_6321, partial [Aureococcus
anophagefferens]
Length = 173
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 16/174 (9%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVG--------RRDFNAFGSHGSTSHVNFRH 56
Y+V HNI N+G+L R+A AFG E+++V R++ FG+HG+ V R
Sbjct: 1 YLVAHNIKSADNLGSLVRTAGAFGAREVLVVSAERTSKRLRKNLRTFGAHGAERRVPLRA 60
Query: 57 FHSLSDARVFLKS--KDCDICGVEITDNAV-----DVTQHPFKKSTAFLLGNEGMGLSAK 109
F +L ++K+ ++C+I G+EI D AV D P F+ GNEG GL
Sbjct: 61 FGTLELLVSWVKAPPRNCEIFGIEIDDVAVSCAAPDAFGAP-ALPACFMPGNEGEGLLPN 119
Query: 110 ECEICDFFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAE 163
+ +CD VY+PQ+ TASLNV A ++VL + AG++E R GNKY V +
Sbjct: 120 QIALCDRLVYVPQFAPATASLNVNAATAVVLSWYAAAAGYAEERRSGNKYDVVD 173
>gi|90023109|ref|YP_528936.1| tRNA/rRNA methyltransferase (SpoU) family protein [Saccharophagus
degradans 2-40]
gi|89952709|gb|ABD82724.1| tRNA/rRNA methyltransferase (SpoU) [Saccharophagus degradans 2-40]
Length = 161
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
+++ N+ N+G L R+A AFG E+ ++GR+ F+ +G+ + S FRHF + +A
Sbjct: 5 LLIFNVQSNTNIGQLIRTANAFGAEEICVIGRKKFSTYGNQKTASTTKFRHFFQIDEAFE 64
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ D GVEIT+ A + + F++ T F++GNEG G+ + C + VYIPQYG
Sbjct: 65 YYGQAGYDFVGVEITEQAKSINKMRFERDTLFIMGNEGDGIHENILKRCHYCVYIPQYGT 124
Query: 126 GTASLNVTVAASIVLH 141
G AS+NV A I+ +
Sbjct: 125 G-ASINVNTACGIIFN 139
>gi|224012188|ref|XP_002294747.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969767|gb|EED88107.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 156
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 3/145 (2%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
+Y+++ NI+K NV L + A +FG ++ +VG++ F+ F T+ V ++
Sbjct: 3 AYLIITNISKSRNVKNLLQIAASFGAPKIFVVGQKSFD-FDPSSETTDVPLLLQRHIASG 61
Query: 64 RVFLKSKDC--DICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
R+ + D + GVEI +A ++ PF S A ++GNEG G+S+K+ +CD FV I
Sbjct: 62 RMEIVRFDKLKEFIGVEIDSSAKNLETEPFFTSAAIMMGNEGSGMSSKQMSLCDGFVRIS 121
Query: 122 QYGGGTASLNVTVAASIVLHHFGVW 146
Q+GGGTASLNV+VAA +VLH + W
Sbjct: 122 QFGGGTASLNVSVAAGLVLHRYFHW 146
>gi|301111568|ref|XP_002904863.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095193|gb|EEY53245.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 216
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 24/212 (11%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFR---HFH 58
+E Y+V+ N + R N+GT R+A+AFG ++ +LVG A ST R F+
Sbjct: 11 VELYMVLSNKSGRQNLGTYLRTASAFGTTQ-VLVGD-GLRALRYSWSTPSAEVRGCCAFY 68
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
++AR +LK+K C I G +T +A P++ ++AF++ NE GLS ++ ICD FV
Sbjct: 69 DFTEARGYLKTKGCTIFG--LTAHAT-----PYEGTSAFVIDNEFPGLSEEQRAICDHFV 121
Query: 119 YIPQYGGGTA-----SLNVTVAASIVLHHFGVWAGFS----ERTRDGNKYVVAERSARQV 169
++P +G T +L+ TV +I LHHF +A F E T K+V+ A
Sbjct: 122 HVPFHGEQTEASSHLTLDTTVVTAITLHHFTAFAQFPMRAIEATNTQGKFVL---DAYPT 178
Query: 170 RRSFCAEKPESIIEMRRSRRENASNGFFDGSG 201
E+ + MR ++R NA +G +G G
Sbjct: 179 FDPAHNERGQEKAAMREAKRANADDGLAEGDG 210
>gi|340508552|gb|EGR34234.1| obp33pep like protein, putative [Ichthyophthirius multifiliis]
Length = 121
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 51/78 (65%)
Query: 82 NAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASLNVTVAASIVLH 141
N++++ Q PFK T FL+GNEG GL ICD FVYIPQY TASLNV AASIV H
Sbjct: 3 NSINIIQQPFKGDTVFLMGNEGQGLLDCHKNICDQFVYIPQYTNKTASLNVACAASIVFH 62
Query: 142 HFGVWAGFSERTRDGNKY 159
H+ +WA + E G K+
Sbjct: 63 HWAMWAQYEECQLFGEKF 80
>gi|406672724|ref|ZP_11079949.1| hypothetical protein HMPREF9700_00491 [Bergeyella zoohelcum CCUG
30536]
gi|423315799|ref|ZP_17293704.1| hypothetical protein HMPREF9699_00275 [Bergeyella zoohelcum ATCC
43767]
gi|405585515|gb|EKB59339.1| hypothetical protein HMPREF9699_00275 [Bergeyella zoohelcum ATCC
43767]
gi|405587268|gb|EKB60996.1| hypothetical protein HMPREF9700_00491 [Bergeyella zoohelcum CCUG
30536]
Length = 179
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFR 55
I VV+ NI HNVG R+A AF + ++IL G R+ + + G+T VN+
Sbjct: 25 IPVIVVLDNIRSMHNVGAFFRTADAFIMEKIILCGITPTPPHREIHK-AALGATESVNWE 83
Query: 56 HFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPF--KKSTAFLLGNEGMGLSAKECEI 113
+ ++S+ LKS+ I G+E T+N++ + Q P KK A + GNE GLS +
Sbjct: 84 YHKTISETLNTLKSEGYAITGIEQTNNSIAMNQFPIDTKKKYALVFGNEVDGLSDEALNS 143
Query: 114 CDFFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
D F+ IPQ G SLNV+V IV++HF + GF ++
Sbjct: 144 YDSFIEIPQL-GTKHSLNVSVCGGIVMYHF--FDGFMKK 179
>gi|375013599|ref|YP_004990587.1| rRNA methylase [Owenweeksia hongkongensis DSM 17368]
gi|359349523|gb|AEV33942.1| rRNA methylase [Owenweeksia hongkongensis DSM 17368]
Length = 175
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+V+ N+ NVG++ R++ AF V E+ L G R+ N + G+T V++RHF
Sbjct: 27 LVLDNVRSLLNVGSVFRTSDAFRVEELHLCGLTATPPHREMNK-TALGATESVSWRHFVE 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKK--STAFLLGNEGMGLSAKECEICDFF 117
SD+ LK K + +E T A+ + Q PF++ A + GNE G+S + +CDF
Sbjct: 86 TSDSLKDLKEKGYTLIAIEQTSGAISLEQFPFEQHDKVALIFGNEVKGVSNEALALCDFA 145
Query: 118 VYIPQYGGGTASLNVTVAASIVL 140
+ IPQ+ G SLN++V+A I L
Sbjct: 146 IEIPQF-GTKHSLNISVSAGIAL 167
>gi|359768551|ref|ZP_09272324.1| putative RNA methyltransferase [Gordonia polyisoprenivorans NBRC
16320]
gi|359313989|dbj|GAB25157.1| putative RNA methyltransferase [Gordonia polyisoprenivorans NBRC
16320]
Length = 230
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H +++D
Sbjct: 82 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLEHHDTVADLI 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + K+ + V+ T A + + L G EG G+SA E D V I Q+
Sbjct: 142 AWAREKNLKVVAVDNTPGAQPLETAELPRECVLLFGQEGPGVSADAQEQADLTVSIAQF- 200
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 201 GSTRSINAGVAAGIAMHAW 219
>gi|378719873|ref|YP_005284762.1| putative tRNA/rRNA methyltransferase [Gordonia polyisoprenivorans
VH2]
gi|375754576|gb|AFA75396.1| putative tRNA/rRNA methyltransferase [Gordonia polyisoprenivorans
VH2]
Length = 230
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H +++D
Sbjct: 82 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLEHHDTVADLI 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + K+ + V+ T A + + L G EG G+SA E D V I Q+
Sbjct: 142 AWAREKNLKVVAVDNTPGAQPLETAELPRECVLLFGQEGPGVSADAQEQADLTVSIAQF- 200
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 201 GSTRSINAGVAAGIAMHAW 219
>gi|453363761|dbj|GAC80498.1| putative RNA methyltransferase [Gordonia malaquae NBRC 108250]
Length = 245
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++ +
Sbjct: 97 HVAIENWAHDANIGTVVRTANAFLAAEVHIVGRRRWNRRGAMVTDRYQHLRHHDTVDELM 156
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
V+ + D + V+ T +V + + L G EG G+S D V I Q+
Sbjct: 157 VWARENDLAVVAVDNTPGSVRLETTELPRRCVLLFGQEGPGVSDDAQARADLTVSIAQF- 215
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 216 GSTRSINAGVAAGIVMHSW 234
>gi|381393448|ref|ZP_09919171.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola punicea DSM
14233 = ACAM 611]
gi|379331006|dbj|GAB54304.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola punicea DSM
14233 = ACAM 611]
Length = 233
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
+++ + K HNV + RSA A GV + + R + GS V+ + S DA
Sbjct: 28 LLLEEVHKPHNVSAIIRSADAVGVHRLHAVWENNRPLLRSTAMGSQVWVDMQRHSSAEDA 87
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
+ KS++ + + NAVD + F K TA +LG E G +++ +CD+ + IP
Sbjct: 88 ITYFKSQNMQVLVTHLDQNAVDFRKIDFTKPTAIVLGQEKTGATSEAIAMCDYSIAIPML 147
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRDG 156
G SLNV+VAA+++L+ ++R RD
Sbjct: 148 -GMVQSLNVSVAAALILYE-------AQRQRDN 172
>gi|326384122|ref|ZP_08205805.1| tRNA/rRNA methyltransferase SpoU [Gordonia neofelifaecis NRRL
B-59395]
gi|326197282|gb|EGD54473.1| tRNA/rRNA methyltransferase SpoU [Gordonia neofelifaecis NRRL
B-59395]
Length = 231
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++ +
Sbjct: 83 HVAIENWGHDSNIGTVVRTANAFLAAEVHIVGRRRWNRRGAMVTDRYQHLRHHATVDELM 142
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + D + V+ T AV + + + + G EG G+S + + D V I Q+
Sbjct: 143 AWAREHDLTVVAVDNTPGAVALERTELPRRALLVFGQEGPGVSDETQDRADLTVSIAQF- 201
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 202 GSTRSINAGVAAGIVMHSW 220
>gi|410087544|ref|ZP_11284247.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Morganella morganii
SC01]
gi|409765988|gb|EKN50086.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Morganella morganii
SC01]
Length = 231
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--GSTSHVNFRHFHSLSDARV 65
+ + K HNV + RSA A G+ ++ V S GS S VN + +L+DA
Sbjct: 24 LEEVHKPHNVSAVIRSADAVGIHDLHAVWPEKIKTLVSSAAGSNSWVNVHNHDTLADAVT 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LKS+ I ++D+AVD F + T ++G+E G+S + + D + IP G
Sbjct: 84 LLKSQGMQILATHLSDSAVDFRAIDFTRPTCIIMGSEKTGISQEAIRLADQHIMIP-MSG 142
Query: 126 GTASLNVTVAASIVLH 141
SLNV+VAA+++L+
Sbjct: 143 MVQSLNVSVAAAVILY 158
>gi|378581686|ref|ZP_09830330.1| tRNA (Guanosine-2'-O-)-methyltransferase [Pantoea stewartii subsp.
stewartii DC283]
gi|377815600|gb|EHT98711.1| tRNA (Guanosine-2'-O-)-methyltransferase [Pantoea stewartii subsp.
stewartii DC283]
Length = 233
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRR-DFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ + G+R A S GS S VN S+SD
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPGQRMRTQASASAGSNSWVNVVTHRSISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++D I ++ +AVD + + K T L+G E G++ + + D + IP
Sbjct: 82 AISHLKTQDMQILATNLSADAVDFREIDYTKPTCILMGQEKTGITDEALALADHHIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|430947038|ref|ZP_19485818.1| RNA methyltransferase [Enterococcus faecium E1576]
gi|430558435|gb|ELA97854.1| RNA methyltransferase [Enterococcus faecium E1576]
Length = 254
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L+D +K K + G E+ + A ++ + + A ++GNEG G+S K + D V
Sbjct: 169 DLADVIPVMKGKGFTVYGTELNEEAHELDKVEKTEDFAIIMGNEGQGVSQKILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|297570796|ref|YP_003696570.1| tRNA/rRNA methyltransferase SpoU [Arcanobacterium haemolyticum DSM
20595]
gi|296931143|gb|ADH91951.1| tRNA/rRNA methyltransferase (SpoU) [Arcanobacterium haemolyticum
DSM 20595]
Length = 226
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N+ N+G++ R+ AF VS + +VG++ +N G+ + ++N H +S
Sbjct: 71 HIAIENLEHDLNIGSIVRTGNAFNVSGVHIVGKKKWNRRGALVTDRYLNVHHHAEVSSLV 130
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + D + V+ + + + + + + G E GLSA+ D VYIPQY
Sbjct: 131 EWARENDYQLVAVDNMEGSTPIAETALPERAVLIFGQESNGLSAELLAAADSAVYIPQY- 189
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV AA+I +H +
Sbjct: 190 GSTRSMNVAAAAAISMHMW 208
>gi|392989008|ref|YP_006487601.1| RNA methyltransferase [Enterococcus hirae ATCC 9790]
gi|392336428|gb|AFM70710.1| RNA methyltransferase [Enterococcus hirae ATCC 9790]
Length = 254
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG+S ++L G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGLSGVVL-GKGSADIYSTKVLRSMQGSNYHLPILQ-T 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L LK ++ +I G E+ ++A + Q + A ++GNEG G+ + + D +
Sbjct: 169 DLEQMIPLLKEQNFNIYGTELNEDARSLEQVTVPEKYAIVMGNEGQGVRPEILSLTDKNI 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIP-IRGNAESLNVGVAAGIVLYHFSL 254
>gi|319891496|ref|YP_004148371.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus
pseudintermedius HKU10-03]
gi|386320162|ref|YP_006016325.1| TrmH family RNA methyltransferase [Staphylococcus pseudintermedius
ED99]
gi|317161192|gb|ADV04735.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus
pseudintermedius HKU10-03]
gi|323465333|gb|ADX77486.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
pseudintermedius ED99]
Length = 249
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR + A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGIIIPKRRSVSLTQTVAKASTGAIQHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+LS LK K I G E NA D Q A ++G+EG G+S + E CDF
Sbjct: 154 VTNLSQTMDVLKDKGYWIAGAE-ASNATDYRQMQADMPLAIVIGSEGQGMSRRVKEKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMYEV 238
>gi|386287387|ref|ZP_10064560.1| tRNA guanosine-2'-O-methyltransferase [gamma proteobacterium
BDW918]
gi|385279519|gb|EIF43458.1| tRNA guanosine-2'-O-methyltransferase [gamma proteobacterium
BDW918]
Length = 231
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAF--GSHGSTSHVNFRHFHSLSD 62
+V N+ K N+ + R+A A G+ M ++ +D+ AF + GS S VN ++
Sbjct: 22 IVTDNVHKSRNLSAIVRTADAAGIGSMHCVIPDKDYKAFRGTAMGSHSWVNVERKQDVTT 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + + + AVD + + K T L+G E +G+S C + D F+ IP
Sbjct: 82 ALAPLKAQGYQVLAAHLGEGAVDFREPDYTKPTVILMGAEKLGVSPAGCALADAFITIPM 141
Query: 123 YGGGTASLNVTVAASIVL 140
G S NV+VAA I+L
Sbjct: 142 M-GMVQSFNVSVAAGIIL 158
>gi|134103609|ref|YP_001109270.1| tRNA/rRNA methyltransferase SpoU [Saccharopolyspora erythraea NRRL
2338]
gi|291004854|ref|ZP_06562827.1| tRNA/rRNA methyltransferase (SpoU) [Saccharopolyspora erythraea
NRRL 2338]
gi|133916232|emb|CAM06345.1| tRNA/rRNA methyltransferase (SpoU) [Saccharopolyspora erythraea
NRRL 2338]
Length = 215
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + +VGRR +N G+ + + + H L R
Sbjct: 67 HVAIENFQHDHNIGTVVRTANAFAARAVHIVGRRRWNRRGAMVTDRYQHVHHHPDLESLR 126
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + V+ T + + + + L G EG GL + E D V I Q+
Sbjct: 127 AYAREHSLAVVAVDNTQGSRPIERTALPERCVLLFGQEGPGLRDESREGADLVVSIAQF- 185
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 186 GSTRSINAGVAAGIVMHTW 204
>gi|87303170|ref|ZP_01085968.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. WH 5701]
gi|87282337|gb|EAQ74297.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. WH 5701]
Length = 229
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSE---MILVGR-RDFNAFGSHGSTSHVNFRH 56
M + VV+ + K HN+ + RS A GV E + L GR R FN+ + GS V R
Sbjct: 19 MADLTVVLEAVDKPHNLSAILRSCDAVGVLEAHVVSLKGRPRTFNST-AQGSQKWVPLRP 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ + LK + + G ++ +AVD Q F TAFLLG E GLS + D
Sbjct: 78 HERVEEVLGQLKQQGFRLYGTQLGTDAVDYRQCDFTGPTAFLLGAEKWGLSEAAAAMVDQ 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
++IP GG SLNV+VAA+++L
Sbjct: 138 ALFIP-TGGMVQSLNVSVAAAVLL 160
>gi|441521116|ref|ZP_21002779.1| putative RNA methyltransferase [Gordonia sihwensis NBRC 108236]
gi|441459327|dbj|GAC60740.1| putative RNA methyltransferase [Gordonia sihwensis NBRC 108236]
Length = 226
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
E ++ + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH +++D
Sbjct: 76 EFHIAIENWGHDANIGTVVRTANAFLAAEVHIVGRRRWNRRGAMVTDRYQHLRHHSTVAD 135
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ +++ + V+ T A + + + + G EG G+S + + D V I Q
Sbjct: 136 LMEWARAEHLTVVAVDNTPGAAALERTELPRRCVLVFGQEGPGVSDETQDSADLTVSIAQ 195
Query: 123 YGGGTASLNVTVAASIVLHHF 143
+ G T S+N VAA IV+H +
Sbjct: 196 F-GSTRSINAGVAAGIVMHSW 215
>gi|348175047|ref|ZP_08881941.1| tRNA/rRNA methyltransferase (SpoU) [Saccharopolyspora spinosa NRRL
18395]
Length = 214
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + +VGRR +N G+ + + + H + R
Sbjct: 66 HVAIENFQHDHNIGTVVRTANAFAAKAVHIVGRRRWNRRGAMVTDRYQHIHHHPDVESLR 125
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ D + V+ T AV + + + L G EG GL + D V I Q+
Sbjct: 126 GYATEHDLALVAVDNTVGAVPIERTALPRRCVLLFGQEGPGLRDDSRQDADLVVSIAQF- 184
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 185 GSTRSINAGVAAGIVMHTW 203
>gi|420264027|ref|ZP_14766662.1| TrmH family RNA methyltransferase [Enterococcus sp. C1]
gi|394768926|gb|EJF48803.1| TrmH family RNA methyltransferase [Enterococcus sp. C1]
Length = 253
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+++++ N+ NVGT+ R+A A G S + L G D + S N+ H L
Sbjct: 109 NWLILDNVQDPGNVGTMIRTADAAGFSGVFLGEGTADLYSTKVLRSMQGSNY-HLPILEG 167
Query: 63 A-RVFLK---SKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
A FLK S I G E+ AV T+ P +++TAF+LGNEG G+ + + D V
Sbjct: 168 AIPPFLKQLRSAGVTIYGTELNKEAVPYTELPKEQTTAFILGNEGQGVHPELLALTDKNV 227
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
YIP YG SLNV +AA I+++
Sbjct: 228 YIPLYGQA-ESLNVAIAAGILMY 249
>gi|325001131|ref|ZP_08122243.1| tRNA/rRNA methyltransferase (SpoU) [Pseudonocardia sp. P1]
Length = 228
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N+ HN+GT+ R+A AFG + +VGRR +N G+ + +++ H +
Sbjct: 80 HVAIENLGHDHNIGTVVRTANAFGAGGVHIVGRRRWNRRGAMVTDRYLSLHHHPGAAGLV 139
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
++ + V+ AV + + + + G EG GLS + E D V I Q+
Sbjct: 140 AHARAAGLALVAVDNLPGAVRLEETALPRDCVLVFGAEGPGLSPELREAADLAVSIAQF- 198
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 199 GSTRSINAGVAAGIVMHAW 217
>gi|283836029|ref|ZP_06355770.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter youngae ATCC
29220]
gi|291068213|gb|EFE06322.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter youngae ATCC
29220]
Length = 229
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASSAAGSNSWVQVKTHPTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTQLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|432467978|ref|ZP_19710055.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE205]
gi|432585189|ref|ZP_19821580.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE57]
gi|433074923|ref|ZP_20261560.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE129]
gi|433122278|ref|ZP_20307933.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE157]
gi|433185385|ref|ZP_20369619.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE85]
gi|430990920|gb|ELD07340.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE205]
gi|431115089|gb|ELE18616.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE57]
gi|431583438|gb|ELI55443.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE129]
gi|431638796|gb|ELJ06674.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE157]
gi|431702355|gb|ELJ67155.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE85]
Length = 229
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|72383592|ref|YP_292947.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus str.
NATL2A]
gi|72003442|gb|AAZ59244.1| tRNA (guanosine-2'-O-)-methyltransferase [Prochlorococcus marinus
str. NATL2A]
Length = 229
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV-GRRDFNAFGS--HGSTSHVNFRHFHSLSD 62
V++ N+ K HN+ + RS A GV E + + F F S GS V + ++
Sbjct: 24 VLIENVEKPHNLSAIIRSCDAVGVLEAYAIFNKEKFLTFNSTAQGSQKWVKINQYKKTTE 83
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK K + G + ++D + FK TAF+LG E G+S + + D ++IP
Sbjct: 84 AIKVLKEKGFKLYGTNLNPRSIDYRKCDFKGPTAFVLGAEKWGISEEASSLMDEHIHIPM 143
Query: 123 YGGGTASLNVTVAASIVL 140
G SLNV+VAAS +L
Sbjct: 144 -RGMVESLNVSVAASALL 160
>gi|417945614|ref|ZP_12588845.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli XH140A]
gi|417976437|ref|ZP_12617230.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli XH001]
gi|342362685|gb|EGU26801.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli XH140A]
gi|344193860|gb|EGV47937.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli XH001]
Length = 229
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A V LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVVHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|374289399|ref|YP_005036484.1| tRNA (guanosine-2'-O-)-methyltransferase [Bacteriovorax marinus SJ]
gi|301167940|emb|CBW27526.1| tRNA (guanosine-2'-O-)-methyltransferase [Bacteriovorax marinus SJ]
Length = 249
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V++ ++ N+ ++R+ FGV ++ ++ G + S G+ V + ++ D
Sbjct: 63 VILESLGDLGNLQAISRTCDNFGVQKLEIIETKGPMKWTNRTSQGAHKWVTMQKWYETKD 122
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ K + I +D A+ T+ F K TA L+GNE G+S E+ D IP
Sbjct: 123 CLQYFKDRGVQIVSTAFSDKAIPYTEVDFTKPTALLMGNESFGISEVAREMSDVECIIPS 182
Query: 123 YGGGTASLNVTVAASIVLHH 142
Y G + SLNV+VAA+IV+ H
Sbjct: 183 Y-GYSQSLNVSVAAAIVIEH 201
>gi|193212910|ref|YP_001998863.1| tRNA/rRNA methyltransferase SpoU [Chlorobaculum parvum NCIB 8327]
gi|193086387|gb|ACF11663.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobaculum parvum NCIB 8327]
Length = 178
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+++HNI NVG++ R+A A G+ E+++ G R++ + + G+ V +RHF
Sbjct: 30 LMLHNIRSMWNVGSMFRTADAAGIDEIVITGYTATPPRKEIDKT-ALGAQLTVPWRHFAD 88
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQ-HPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+A LK + C + G+EI +N+ + P L+GNE G+ + CD +
Sbjct: 89 PLEALSVLKGEGCKVFGLEIAENSRSYSSLQPDDYPLVLLVGNEVDGIGDELLARCDGVL 148
Query: 119 YIPQYGGGTASLNVTVAASIVL 140
IPQY G SLNV+VAA + L
Sbjct: 149 EIPQY-GTKHSLNVSVAAGVAL 169
>gi|218961471|ref|YP_001741246.1| putative tRNA/rRNA methyltransferase [Candidatus Cloacamonas
acidaminovorans]
gi|167730128|emb|CAO81040.1| putative tRNA/rRNA methyltransferase [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 269
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V+ N+ NVG+L R+A G+ ++I+ G + G+ V +++F S
Sbjct: 121 VICDNLRSVFNVGSLFRTAECLGIGKIIVCGITPTPEHSNMPKTAMGTEKLVAWQYFPST 180
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++A F + I +E DNA V Q ++ A ++GNE +G+ + E+CD F+ +
Sbjct: 181 TEAIAFCHQEGFFIYALETIDNAKSVFQTVYQFPLAIVIGNEALGIESSILELCDEFITL 240
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFS 150
PQ G SLNV VA IVL+ ++ GF+
Sbjct: 241 PQLGWKN-SLNVGVATGIVLYQI-LFGGFN 268
>gi|189500046|ref|YP_001959516.1| tRNA/rRNA methyltransferase SpoU [Chlorobium phaeobacteroides BS1]
gi|189495487|gb|ACE04035.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobium phaeobacteroides
BS1]
Length = 180
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
V++HNI +NVG++ R+A A G+ +I+ G R++ + + G+ V++ ++
Sbjct: 31 VLLHNIRSMYNVGSVFRTADAAGIDRLIITGYTATPPRKEIDK-TALGAQESVDWEYYTH 89
Query: 60 LSDARVFLKSKDCDICGVEITDNA---VDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ LK ICG+EIT+N+ D+ + F +LGNE G+ + CD
Sbjct: 90 PEEILGVLKDSGVTICGLEITENSRPYTDIKKDDF--PLCLILGNEVDGIDDDVLQFCDH 147
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
IPQY G SLNV+VAA + L+
Sbjct: 148 VFEIPQY-GTKHSLNVSVAAGVALYEM 173
>gi|425302520|ref|ZP_18692400.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 07798]
gi|408210857|gb|EKI35414.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 07798]
Length = 229
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + +ST L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRSTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|455737774|ref|YP_007504040.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Morganella morganii
subsp. morganii KT]
gi|455419337|gb|AGG29667.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Morganella morganii
subsp. morganii KT]
Length = 217
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--GSTSHVNFRHFHSLSDARV 65
+ + K HNV + RSA A G+ ++ V S GS S VN + +L+ A
Sbjct: 10 LEEVHKPHNVSAVIRSADAVGIHDLHAVWPEKIKTLVSSAAGSNSWVNVHNHDTLAGAVT 69
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LKS+ I ++D+AVD F + T ++G+E G+S + + D + IP G
Sbjct: 70 LLKSQGMQILATHLSDSAVDFRAIDFTRPTCIIMGSEKTGISQEAIRLADQHIMIP-MSG 128
Query: 126 GTASLNVTVAASIVLH 141
SLNV+VAA+++L+
Sbjct: 129 MVQSLNVSVAAAVILY 144
>gi|421493002|ref|ZP_15940360.1| hypothetical protein MU9_1530 [Morganella morganii subsp. morganii
KT]
gi|400192630|gb|EJO25768.1| hypothetical protein MU9_1530 [Morganella morganii subsp. morganii
KT]
Length = 231
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--GSTSHVNFRHFHSLSDARV 65
+ + K HNV + RSA A G+ ++ V S GS S VN + +L+ A
Sbjct: 24 LEEVHKPHNVSAVIRSADAVGIHDLHAVWPEKIKTLVSSAAGSNSWVNVHNHDTLAGAVT 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LKS+ I ++D+AVD F + T ++G+E G+S + + D + IP G
Sbjct: 84 LLKSQGMQILATHLSDSAVDFRAIDFTRPTCIIMGSEKTGISQEAIRLADQHIMIP-MSG 142
Query: 126 GTASLNVTVAASIVLH 141
SLNV+VAA+++L+
Sbjct: 143 MVQSLNVSVAAAVILY 158
>gi|424951414|ref|ZP_18366512.1| RNA methyltransferase, TrmH family [Enterococcus faecium R496]
gi|424975284|ref|ZP_18388456.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1137]
gi|424982558|ref|ZP_18395207.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV99]
gi|425022009|ref|ZP_18432222.1| RNA methyltransferase, TrmH family [Enterococcus faecium C497]
gi|425026905|ref|ZP_18434975.1| RNA methyltransferase, TrmH family [Enterococcus faecium C1904]
gi|425046160|ref|ZP_18450200.1| RNA methyltransferase, TrmH family [Enterococcus faecium 510]
gi|425053490|ref|ZP_18457032.1| RNA methyltransferase, TrmH family [Enterococcus faecium 506]
gi|425059004|ref|ZP_18462356.1| RNA methyltransferase, TrmH family [Enterococcus faecium 504]
gi|427396436|ref|ZP_18889195.1| hypothetical protein HMPREF9307_01371 [Enterococcus durans
FB129-CNAB-4]
gi|430835566|ref|ZP_19453555.1| RNA methyltransferase [Enterococcus faecium E0680]
gi|430855160|ref|ZP_19472870.1| RNA methyltransferase [Enterococcus faecium E1392]
gi|430857875|ref|ZP_19475508.1| RNA methyltransferase [Enterococcus faecium E1552]
gi|431147907|ref|ZP_19499273.1| RNA methyltransferase [Enterococcus faecium E1620]
gi|431252064|ref|ZP_19504122.1| RNA methyltransferase [Enterococcus faecium E1623]
gi|431374439|ref|ZP_19510127.1| RNA methyltransferase [Enterococcus faecium E1627]
gi|431513932|ref|ZP_19515980.1| RNA methyltransferase [Enterococcus faecium E1634]
gi|431547501|ref|ZP_19519068.1| RNA methyltransferase [Enterococcus faecium E1731]
gi|431710426|ref|ZP_19525238.1| RNA methyltransferase [Enterococcus faecium E1904]
gi|431742852|ref|ZP_19531736.1| RNA methyltransferase [Enterococcus faecium E2071]
gi|431755095|ref|ZP_19543751.1| RNA methyltransferase [Enterococcus faecium E2883]
gi|431769221|ref|ZP_19557645.1| RNA methyltransferase [Enterococcus faecium E1321]
gi|431781649|ref|ZP_19569793.1| RNA methyltransferase [Enterococcus faecium E6012]
gi|431785969|ref|ZP_19573989.1| RNA methyltransferase [Enterococcus faecium E6045]
gi|447912326|ref|YP_007393738.1| rRNA methylase [Enterococcus faecium NRRL B-2354]
gi|402930113|gb|EJX49806.1| RNA methyltransferase, TrmH family [Enterococcus faecium R496]
gi|402954183|gb|EJX71826.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1137]
gi|402960556|gb|EJX77687.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV99]
gi|403004639|gb|EJY18427.1| RNA methyltransferase, TrmH family [Enterococcus faecium C497]
gi|403005347|gb|EJY19066.1| RNA methyltransferase, TrmH family [Enterococcus faecium C1904]
gi|403025064|gb|EJY37171.1| RNA methyltransferase, TrmH family [Enterococcus faecium 510]
gi|403030274|gb|EJY41971.1| RNA methyltransferase, TrmH family [Enterococcus faecium 506]
gi|403036723|gb|EJY48064.1| RNA methyltransferase, TrmH family [Enterococcus faecium 504]
gi|425723106|gb|EKU85997.1| hypothetical protein HMPREF9307_01371 [Enterococcus durans
FB129-CNAB-4]
gi|430489257|gb|ELA65881.1| RNA methyltransferase [Enterococcus faecium E0680]
gi|430547085|gb|ELA87027.1| RNA methyltransferase [Enterococcus faecium E1552]
gi|430547446|gb|ELA87378.1| RNA methyltransferase [Enterococcus faecium E1392]
gi|430575559|gb|ELB14270.1| RNA methyltransferase [Enterococcus faecium E1620]
gi|430578490|gb|ELB17042.1| RNA methyltransferase [Enterococcus faecium E1623]
gi|430583063|gb|ELB21452.1| RNA methyltransferase [Enterococcus faecium E1627]
gi|430586188|gb|ELB24449.1| RNA methyltransferase [Enterococcus faecium E1634]
gi|430591170|gb|ELB29209.1| RNA methyltransferase [Enterococcus faecium E1731]
gi|430596349|gb|ELB34184.1| RNA methyltransferase [Enterococcus faecium E1904]
gi|430607821|gb|ELB45122.1| RNA methyltransferase [Enterococcus faecium E2071]
gi|430617664|gb|ELB54530.1| RNA methyltransferase [Enterococcus faecium E2883]
gi|430627759|gb|ELB64233.1| RNA methyltransferase [Enterococcus faecium E1321]
gi|430646584|gb|ELB82059.1| RNA methyltransferase [Enterococcus faecium E6045]
gi|430648867|gb|ELB84256.1| RNA methyltransferase [Enterococcus faecium E6012]
gi|445188035|gb|AGE29677.1| rRNA methylase [Enterococcus faecium NRRL B-2354]
Length = 254
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L+D +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLADVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|294620204|ref|ZP_06699538.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1679]
gi|314940174|ref|ZP_07847352.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133a04]
gi|314942409|ref|ZP_07849252.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133C]
gi|314952315|ref|ZP_07855326.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133A]
gi|314994242|ref|ZP_07859545.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133B]
gi|314997157|ref|ZP_07862143.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133a01]
gi|424963509|ref|ZP_18377721.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1190]
gi|424972435|ref|ZP_18385774.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1139]
gi|424978996|ref|ZP_18391868.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1123]
gi|425037178|ref|ZP_18441863.1| RNA methyltransferase, TrmH family [Enterococcus faecium 514]
gi|425042262|ref|ZP_18446609.1| RNA methyltransferase, TrmH family [Enterococcus faecium 511]
gi|425048174|ref|ZP_18452096.1| RNA methyltransferase, TrmH family [Enterococcus faecium 509]
gi|431771085|ref|ZP_19559472.1| RNA methyltransferase [Enterococcus faecium E1644]
gi|431772528|ref|ZP_19560866.1| RNA methyltransferase [Enterococcus faecium E2369]
gi|291593557|gb|EFF25097.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1679]
gi|313588731|gb|EFR67576.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133a01]
gi|313591329|gb|EFR70174.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133B]
gi|313595574|gb|EFR74419.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133A]
gi|313598809|gb|EFR77654.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133C]
gi|313640613|gb|EFS05193.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0133a04]
gi|402949014|gb|EJX67107.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1190]
gi|402954240|gb|EJX71878.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1139]
gi|402959659|gb|EJX76897.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1123]
gi|403011992|gb|EJY25265.1| RNA methyltransferase, TrmH family [Enterococcus faecium 514]
gi|403023860|gb|EJY36076.1| RNA methyltransferase, TrmH family [Enterococcus faecium 511]
gi|403031450|gb|EJY43056.1| RNA methyltransferase, TrmH family [Enterococcus faecium 509]
gi|430633865|gb|ELB70015.1| RNA methyltransferase [Enterococcus faecium E1644]
gi|430637607|gb|ELB73606.1| RNA methyltransferase [Enterococcus faecium E2369]
Length = 254
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L+D +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLADVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|377566100|ref|ZP_09795372.1| putative RNA methyltransferase [Gordonia sputi NBRC 100414]
gi|377526815|dbj|GAB40537.1| putative RNA methyltransferase [Gordonia sputi NBRC 100414]
Length = 235
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF S + +VGRR +N G+ + + + +H S+S+
Sbjct: 87 HVAIENFAHDANIGTVVRTANAFAASAVHIVGRRRWNRRGAMVTDRYQHLQHHDSVSELM 146
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + V+ T +V + + L G EG G+S D V I Q+
Sbjct: 147 TWARENGLAVVAVDNTPGSVPLETADLPRECVLLFGQEGPGVSDDAQAQADLTVSIAQF- 205
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 206 GSTRSINAGVAAGIAMHAW 224
>gi|430843778|ref|ZP_19461677.1| RNA methyltransferase [Enterococcus faecium E1050]
gi|430497637|gb|ELA73674.1| RNA methyltransferase [Enterococcus faecium E1050]
Length = 254
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S K + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQKILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|423110959|ref|ZP_17098654.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5243]
gi|423116961|ref|ZP_17104652.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5245]
gi|376376830|gb|EHS89605.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5245]
gi|376377439|gb|EHS90208.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5243]
Length = 229
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|284992366|ref|YP_003410920.1| tRNA/rRNA methyltransferase SpoU [Geodermatophilus obscurus DSM
43160]
gi|284065611|gb|ADB76549.1| tRNA/rRNA methyltransferase (SpoU) [Geodermatophilus obscurus DSM
43160]
Length = 213
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++
Sbjct: 66 HVAIENWRHDLNIGTVVRTANAFLAAEVHIVGRRRWNRRGAMVTDRYQHVRHHPDVAALV 125
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +S + V+ A + P ++ L G EG GLSA+ + D + I Q+
Sbjct: 126 TWARSDGLPLLAVDNLPGARPLETEPLPRACVLLFGQEGTGLSAEARDAADGVLSIAQF- 184
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 185 GSTRSVNAGVAAGIAMHAW 203
>gi|124025191|ref|YP_001014307.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
NATL1A]
gi|123960259|gb|ABM75042.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
NATL1A]
Length = 229
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV-GRRDFNAFGS--HGSTSHVNFRHFHSLSD 62
V++ N+ K HN+ + RS A GV E + + F F S GS V + ++
Sbjct: 24 VLIENVEKPHNLSAIIRSCDAVGVLEAYAIFNKEKFLTFNSTAQGSQKWVKINQYKMTTE 83
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK K + G + ++D + FK TAF+LG E G+S + + D ++IP
Sbjct: 84 AIKVLKEKGFKLYGTNLNPRSIDYRKCNFKGPTAFVLGAEKWGISEEASSLMDEHIHIPM 143
Query: 123 YGGGTASLNVTVAASIVL 140
G SLNV+VAAS +L
Sbjct: 144 -RGMVESLNVSVAASALL 160
>gi|379058559|ref|ZP_09849085.1| tRNA/rRNA methyltransferase SpoU [Serinicoccus profundi MCCC
1A05965]
Length = 214
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF + + +VGRR +N G+ + +++ H ++
Sbjct: 67 HVAIENWGHDFNIGSVVRTANAFNAAAIHIVGRRRWNRRGAMVTDRYLHEHHHADVAGLL 126
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + GV+ +V + + + LG EG GLSA+ E C + I QY
Sbjct: 127 TWARENGLPVLGVDNVPGSVPLEGYAVPRDCVLFLGQEGPGLSAEAVEGCQDVLAITQY- 185
Query: 125 GGTASLNVTVAASIVLHHFGV 145
G T S+N AA+IV++H+ +
Sbjct: 186 GSTRSVNAGAAAAIVMYHWAL 206
>gi|330465613|ref|YP_004403356.1| tRNA/rRNA methyltransferase [Verrucosispora maris AB-18-032]
gi|328808584|gb|AEB42756.1| tRNA/rRNA methyltransferase [Verrucosispora maris AB-18-032]
Length = 207
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH S+ D
Sbjct: 60 HVAIENWQHDMNIGTVVRNANAFLAAEVHIVGRRRWNRRGAMVTDRYQHVRHHESIDDFV 119
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ D + G++ + + + L G EG GLS CD I QY
Sbjct: 120 AWAGQHDLPLVGIDNLPGSRPLESSTLPRRCVLLFGQEGPGLSDAARAACDQLFSIAQY- 178
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ I +H +
Sbjct: 179 GSTRSINAGVASGIAMHAW 197
>gi|257879970|ref|ZP_05659623.1| RNA methyltransferase [Enterococcus faecium 1,230,933]
gi|257814198|gb|EEV42956.1| RNA methyltransferase [Enterococcus faecium 1,230,933]
Length = 223
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 80 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 137
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L+D +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 138 DLADVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 197
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
YIP G SLNV VAA IVL+HF
Sbjct: 198 YIPMKGNA-ESLNVGVAAGIVLYHF 221
>gi|262197042|ref|YP_003268251.1| TrmH family RNA methyltransferase [Haliangium ochraceum DSM 14365]
gi|262080389|gb|ACY16358.1| RNA methyltransferase, TrmH family, group 3 [Haliangium ochraceum
DSM 14365]
Length = 267
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 64/144 (44%), Gaps = 5/144 (3%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+V + ++ HN+G + RSA G +IL R G S G+T + +
Sbjct: 112 FVALDSVTDPHNLGAIVRSAHVLGADGVILPKDRAAQVSGVVTKVSAGATEQIAIAQVTN 171
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ A LK + I G+ + A + + +LG EG GL CDF +
Sbjct: 172 LARALEQLKQAEVWIAGLAAGEGATSLPAFDATGALCLVLGAEGTGLRPLVARTCDFLIE 231
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G G SLNV+VAA + L+
Sbjct: 232 IPMLGAGVGSLNVSVAAGVALYEV 255
>gi|71282637|ref|YP_271614.1| tRNA guanosine-2'-O-methyltransferase [Colwellia psychrerythraea
34H]
gi|71148377|gb|AAZ28850.1| tRNA (guanosine-2'-O-)-methyltransferase [Colwellia psychrerythraea
34H]
Length = 235
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HN+ + R+ A G+S++ V + + + GS + ++ ++H +D
Sbjct: 22 VCMEGLHKSHNLAAVVRTCDAIGISDVHAVWKSEEAEVRGGSAAGSQNWIDVHNYHKTAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++D AV+ T+ + K TA +LG E G S + E+ D + IP
Sbjct: 82 AIAALKAQGMQVLVTNLSDTAVNFTEIDYTKPTAIILGQEKFGTSEEALELADQHIVIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA S+VL+
Sbjct: 142 V-GMVQSLNVSVACSVVLY 159
>gi|148241671|ref|YP_001226828.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. RCC307]
gi|147849981|emb|CAK27475.1| tRNA (Guanosine-2'-O-)-methyltransferase [Synechococcus sp. RCC307]
Length = 229
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSE---MILVGR-RDFNAFGSHGSTSHVNFRH 56
M + V++ + K HN+ + R+ A GV E + L GR R FN+ + GS V R
Sbjct: 19 MADLTVLMEAVEKPHNLSAILRTCDATGVFEAHAVSLKGRPRTFNS-TAQGSQKWVPIRD 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
S+ DA L++K I G + NAVD F K +AF+LG E GL+A+ + D
Sbjct: 78 HDSVKDAFAELRAKGFRIYGTMLGVNAVDYRSCDFTKPSAFVLGAEKWGLTAEAGDAVDQ 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
V+IP G SLNV+VAA+ +L
Sbjct: 138 PVFIPM-SGMVQSLNVSVAAATLL 160
>gi|302531148|ref|ZP_07283490.1| RNA methyltransferase [Streptomyces sp. AA4]
gi|302440043|gb|EFL11859.1| RNA methyltransferase [Streptomyces sp. AA4]
Length = 219
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++
Sbjct: 71 HVAIENFQHDHNIGTVVRTANAFAAAEVHIVGRRRWNRRGAMVTDRYQHLRHHEDVASLL 130
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F ++ + V+ T A V ++ L G EG GLS V I Q+
Sbjct: 131 NFATAEGLTVVAVDNTPGAEPVETAELPRNCLLLFGQEGPGLSEAAQTDSAKVVSIAQF- 189
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 190 GTTRSINAGVAAGIVMHAW 208
>gi|340001247|ref|YP_004732131.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella bongori NCTC
12419]
gi|339514609|emb|CCC32375.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella bongori NCTC
12419]
Length = 229
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK ++ + ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGREMQVLATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALNLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|224475680|ref|YP_002633286.1| putative rRNA methyltransferase [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222420287|emb|CAL27101.1| putative rRNA methyltransferase [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 249
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + V++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 96 LPTLVILDGLEDPHNLGSILRTADAAGVDGVIIPKRRSVALTQTVAKASAGAIQHVPVVR 155
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+LS LK + I G DNA D Q A ++GNEG G+S E CDF
Sbjct: 156 VTNLSQTMDQLKDEGYWIAGTA-ADNATDYRQMAADMPLAIVIGNEGHGMSRLVKEKCDF 214
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
++ IP G SLN +VAAS++++
Sbjct: 215 YIKIPMV-GHINSLNASVAASLMMYEI 240
>gi|85711929|ref|ZP_01042984.1| rRNA methylase SpoU [Idiomarina baltica OS145]
gi|85694326|gb|EAQ32269.1| rRNA methylase SpoU [Idiomarina baltica OS145]
Length = 230
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM---ILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
VV+ + K HN+ + R+A A GV EM L + + + GS + VN H LS
Sbjct: 22 VVMEGVHKHHNLSAVVRTADAVGVHEMHAIWLSSKMRVSGGTALGSQNWVNVHHHSQLSP 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +K + + ++D AVD + + + TA LLG E G + + +I D V IP
Sbjct: 82 AVEQIKQQGMQVVVTHLSDQAVDFREIDYTQPTAILLGQEKHGATEEALKIADHHVKIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 142 V-GMVQSLNVSVAGAVMLY 159
>gi|22124024|ref|NP_667447.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis KIM10+]
gi|45439903|ref|NP_991442.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Microtus str. 91001]
gi|51594392|ref|YP_068583.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
IP 32953]
gi|108809496|ref|YP_653412.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Antiqua]
gi|108813973|ref|YP_649740.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Nepal516]
gi|145601108|ref|YP_001165184.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Pestoides F]
gi|150260899|ref|ZP_01917627.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis
CA88-4125]
gi|153947104|ref|YP_001399039.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
IP 31758]
gi|162419568|ref|YP_001604683.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Angola]
gi|165926178|ref|ZP_02222010.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936350|ref|ZP_02224919.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011464|ref|ZP_02232362.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213686|ref|ZP_02239721.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167402131|ref|ZP_02307608.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419397|ref|ZP_02311150.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426644|ref|ZP_02318397.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167468213|ref|ZP_02332917.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis FV-1]
gi|218927258|ref|YP_002345133.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis CO92]
gi|229836148|ref|ZP_04456316.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis Pestoides
A]
gi|229839886|ref|ZP_04460045.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229841968|ref|ZP_04462123.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229904503|ref|ZP_04519614.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis Nepal516]
gi|270488503|ref|ZP_06205577.1| RNA methyltransferase, TrmH family [Yersinia pestis KIM D27]
gi|384137979|ref|YP_005520681.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis A1122]
gi|384412887|ref|YP_005622249.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420544336|ref|ZP_15042590.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-01]
gi|420549736|ref|ZP_15047398.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-02]
gi|420565869|ref|ZP_15061701.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-05]
gi|420573400|ref|ZP_15068522.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-06]
gi|420580171|ref|ZP_15074685.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-07]
gi|420586654|ref|ZP_15080560.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-08]
gi|420588368|ref|ZP_15082109.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-09]
gi|420597777|ref|ZP_15090567.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-10]
gi|420598320|ref|ZP_15091037.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-11]
gi|420614460|ref|ZP_15105505.1| spoU rRNA Methylase family protein [Yersinia pestis PY-14]
gi|420620908|ref|ZP_15111179.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-15]
gi|420630108|ref|ZP_15119506.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-19]
gi|420635236|ref|ZP_15124094.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-25]
gi|420646963|ref|ZP_15134756.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-32]
gi|420651645|ref|ZP_15138933.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-34]
gi|420662191|ref|ZP_15148404.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-42]
gi|420679270|ref|ZP_15163910.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-47]
gi|420683458|ref|ZP_15167657.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-48]
gi|420693312|ref|ZP_15176353.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-52]
gi|420694425|ref|ZP_15177329.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-53]
gi|420704295|ref|ZP_15185514.1| spoU rRNA Methylase family protein [Yersinia pestis PY-54]
gi|420711127|ref|ZP_15191599.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-56]
gi|420716494|ref|ZP_15196361.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-58]
gi|420722149|ref|ZP_15201169.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-59]
gi|420727800|ref|ZP_15206190.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-60]
gi|420743340|ref|ZP_15220196.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-64]
gi|420758430|ref|ZP_15232947.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-66]
gi|420760691|ref|ZP_15234766.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-71]
gi|420765654|ref|ZP_15239259.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-72]
gi|420770856|ref|ZP_15243912.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-76]
gi|420782749|ref|ZP_15254495.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-89]
gi|420787111|ref|ZP_15258302.1| spoU rRNA Methylase family protein [Yersinia pestis PY-90]
gi|420809309|ref|ZP_15278323.1| spoU rRNA Methylase family protein [Yersinia pestis PY-94]
gi|420829368|ref|ZP_15296372.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-98]
gi|420829869|ref|ZP_15296799.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-99]
gi|420845176|ref|ZP_15310663.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-101]
gi|420845644|ref|ZP_15311071.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-102]
gi|420854578|ref|ZP_15318847.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-103]
gi|421761461|ref|ZP_16198261.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis INS]
gi|21956767|gb|AAM83698.1|AE013610_10 putative RNA methylase [Yersinia pestis KIM10+]
gi|45434758|gb|AAS60319.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Microtus str. 91001]
gi|51587674|emb|CAH19274.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia
pseudotuberculosis IP 32953]
gi|108777621|gb|ABG20140.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis Nepal516]
gi|108781409|gb|ABG15467.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis Antiqua]
gi|115345869|emb|CAL18727.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis CO92]
gi|145212804|gb|ABP42211.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis Pestoides
F]
gi|149290307|gb|EDM40384.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia pestis
CA88-4125]
gi|152958599|gb|ABS46060.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
IP 31758]
gi|162352383|gb|ABX86331.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis Angola]
gi|165915964|gb|EDR34572.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922038|gb|EDR39215.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989610|gb|EDR41911.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205088|gb|EDR49568.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166963391|gb|EDR59412.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167048506|gb|EDR59914.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167054333|gb|EDR64150.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229678621|gb|EEO74726.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis Nepal516]
gi|229690278|gb|EEO82332.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696252|gb|EEO86299.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229706596|gb|EEO92602.1| tRNA (Guanosine-2'-O-)-methyltransferase [Yersinia pestis Pestoides
A]
gi|270337007|gb|EFA47784.1| RNA methyltransferase, TrmH family [Yersinia pestis KIM D27]
gi|320013391|gb|ADV96962.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342853108|gb|AEL71661.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis A1122]
gi|391434237|gb|EIQ95452.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-01]
gi|391434519|gb|EIQ95703.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-02]
gi|391448182|gb|EIR08021.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-06]
gi|391450315|gb|EIR09963.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-05]
gi|391453767|gb|EIR13048.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-08]
gi|391456227|gb|EIR15273.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-07]
gi|391466590|gb|EIR24648.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-09]
gi|391467532|gb|EIR25504.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-10]
gi|391484110|gb|EIR40409.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-11]
gi|391496076|gb|EIR51062.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-15]
gi|391502214|gb|EIR56536.1| spoU rRNA Methylase family protein [Yersinia pestis PY-14]
gi|391514927|gb|EIR67991.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-19]
gi|391516412|gb|EIR69310.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-25]
gi|391530577|gb|EIR82143.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-32]
gi|391531953|gb|EIR83398.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-34]
gi|391548673|gb|EIR98447.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-42]
gi|391560805|gb|EIS09401.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-47]
gi|391564930|gb|EIS13089.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-52]
gi|391565407|gb|EIS13521.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-48]
gi|391572315|gb|EIS19560.1| spoU rRNA Methylase family protein [Yersinia pestis PY-54]
gi|391578236|gb|EIS24535.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-53]
gi|391593678|gb|EIS37951.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-56]
gi|391606590|gb|EIS49306.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-60]
gi|391608462|gb|EIS50944.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-58]
gi|391609086|gb|EIS51518.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-59]
gi|391631291|gb|EIS70938.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-64]
gi|391631835|gb|EIS71421.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-66]
gi|391643864|gb|EIS81987.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-71]
gi|391646931|gb|EIS84620.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-72]
gi|391656418|gb|EIS93058.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-76]
gi|391665196|gb|EIT00808.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-89]
gi|391670001|gb|EIT05086.1| spoU rRNA Methylase family protein [Yersinia pestis PY-90]
gi|391687655|gb|EIT20943.1| spoU rRNA Methylase family protein [Yersinia pestis PY-94]
gi|391691794|gb|EIT24689.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-98]
gi|391706325|gb|EIT37768.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-101]
gi|391717016|gb|EIT47420.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-99]
gi|391726763|gb|EIT56067.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-103]
gi|391731967|gb|EIT60597.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-102]
gi|411177783|gb|EKS47795.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis INS]
Length = 230
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAF-GSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + + + GS S V + ++D
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLSAAAGSNSWVQVKTHPHIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +LKS+D I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 82 AIAYLKSQDMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISPEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|430830975|ref|ZP_19449030.1| RNA methyltransferase [Enterococcus faecium E0333]
gi|430482197|gb|ELA59328.1| RNA methyltransferase [Enterococcus faecium E0333]
Length = 254
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
LS+ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLSEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|430851941|ref|ZP_19469676.1| RNA methyltransferase [Enterococcus faecium E1258]
gi|430542523|gb|ELA82631.1| RNA methyltransferase [Enterococcus faecium E1258]
Length = 254
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
LS+ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLSEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|430819656|ref|ZP_19438304.1| RNA methyltransferase [Enterococcus faecium E0045]
gi|430440344|gb|ELA50606.1| RNA methyltransferase [Enterococcus faecium E0045]
Length = 254
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
LS+ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLSEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|170026386|ref|YP_001722891.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
YPIII]
gi|186893379|ref|YP_001870491.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
PB1/+]
gi|294502145|ref|YP_003566207.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis Z176003]
gi|384120628|ref|YP_005503248.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis D106004]
gi|384124506|ref|YP_005507120.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis D182038]
gi|420554995|ref|ZP_15052105.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-03]
gi|420563318|ref|ZP_15059382.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-04]
gi|420607070|ref|ZP_15098884.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-12]
gi|420609002|ref|ZP_15100635.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-13]
gi|420624974|ref|ZP_15114846.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-16]
gi|420640561|ref|ZP_15128900.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-29]
gi|420657061|ref|ZP_15143825.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-36]
gi|420672527|ref|ZP_15157774.1| spoU rRNA Methylase family protein [Yersinia pestis PY-45]
gi|420677684|ref|ZP_15162478.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-46]
gi|420706892|ref|ZP_15187761.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-55]
gi|420736811|ref|ZP_15214329.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-61]
gi|420738361|ref|ZP_15215716.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-63]
gi|420749487|ref|ZP_15225345.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-65]
gi|420776189|ref|ZP_15248733.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-88]
gi|420792554|ref|ZP_15263211.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-91]
gi|420802773|ref|ZP_15272404.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-92]
gi|420803072|ref|ZP_15272667.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-93]
gi|420814052|ref|ZP_15282547.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-95]
gi|420818892|ref|ZP_15286966.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-96]
gi|420834903|ref|ZP_15301340.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-100]
gi|420856430|ref|ZP_15320412.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-113]
gi|169752920|gb|ACA70438.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pseudotuberculosis
YPIII]
gi|186696405|gb|ACC87034.1| tRNA/rRNA methyltransferase (SpoU) [Yersinia pseudotuberculosis
PB1/+]
gi|262360224|gb|ACY56945.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis D106004]
gi|262364170|gb|ACY60727.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis D182038]
gi|294352604|gb|ADE62945.1| tRNA (guanosine-2-O-)-methyltransferase [Yersinia pestis Z176003]
gi|391438729|gb|EIQ99448.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-03]
gi|391441572|gb|EIR02049.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-04]
gi|391474947|gb|EIR32190.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-12]
gi|391498496|gb|EIR53261.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-13]
gi|391513511|gb|EIR66719.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-16]
gi|391529889|gb|EIR81525.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-29]
gi|391534640|gb|EIR85803.1| spoU rRNA Methylase family protein [Yersinia pestis PY-45]
gi|391546210|gb|EIR96223.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-36]
gi|391548726|gb|EIR98496.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-46]
gi|391587478|gb|EIS32634.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-55]
gi|391610974|gb|EIS53198.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-61]
gi|391622038|gb|EIS63013.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-63]
gi|391632469|gb|EIS71987.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-65]
gi|391663547|gb|EIS99380.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-88]
gi|391673279|gb|EIT08016.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-91]
gi|391674066|gb|EIT08707.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-92]
gi|391687627|gb|EIT20918.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-93]
gi|391701828|gb|EIT33784.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-95]
gi|391705577|gb|EIT37104.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-96]
gi|391721086|gb|EIT51058.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-100]
gi|391737867|gb|EIT65717.1| tRNA guanosine-2'-O-methyltransferase [Yersinia pestis PY-113]
Length = 219
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 100/218 (45%), Gaps = 16/218 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAF-GSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + + + GS S V + ++D
Sbjct: 11 VCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLSAAAGSNSWVQVKTHPHIAD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +LKS+D I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 71 AIAYLKSQDMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISPEALALADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLHHFGVW---AGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
G SLNV+VA++++L+ AG +RT V+AE + Q R F P
Sbjct: 131 I-GMVQSLNVSVASALILYEAQRQRQNAGMYKRTHS----VLAE--SEQQRLLFEGGYP- 182
Query: 180 SIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ ++R+ D G ++ + A+ E
Sbjct: 183 --VLAHVAKRKGLPQPHIDEQGQIIADAQWWSAMQATE 218
>gi|319938132|ref|ZP_08012530.1| tRNA/rRNA methyltransferase [Coprobacillus sp. 29_1]
gi|319806653|gb|EFW03302.1| tRNA/rRNA methyltransferase [Coprobacillus sp. 29_1]
Length = 240
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 9/146 (6%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG-----RRDFNAFGSHGSTSHVNFRHF 57
+ Y+++ + NVGT+ R+A AFG +MI+ D + G+ +N
Sbjct: 97 QRYLLLDRVQDPGNVGTMMRTALAFGYDQMIMSEDCVDLYNDKVIRATQGALFQMNV-CV 155
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+L DA VFLK + D+ G + D A + + K AF++GNEG G+ + E+C
Sbjct: 156 MNLKDAIVFLKHQGVDVYGTCLRD-ASSIETYQVKDKMAFVMGNEGQGVCDEILELCQHR 214
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIP SLNV +A++I ++HF
Sbjct: 215 LYIP--IQTVESLNVGIASAITMYHF 238
>gi|56415633|ref|YP_152708.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197364560|ref|YP_002144197.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|56129890|gb|AAV79396.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|197096037|emb|CAR61624.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 229
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK ++ I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGREMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|423142229|ref|ZP_17129867.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
gi|379050158|gb|EHY68051.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
houtenae str. ATCC BAA-1581]
Length = 229
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +LK + + ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAYLKGRGMQVLATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|159902962|ref|YP_001550306.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9211]
gi|159888138|gb|ABX08352.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9211]
Length = 229
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLS 61
++V + K HN+ + R+ A GV E V R R FN+ + GS V + ++
Sbjct: 24 ILVEQVEKPHNLSAIMRTCDAAGVLEAHAVARETKTRTFNS-TAQGSQKWVPLKDHKNIE 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A +FLK + + G ++ +A+D + TAF+LG E GLS + D +YIP
Sbjct: 83 AAALFLKKQGFKLYGTNLSVDAIDYRYCDYTGPTAFVLGAEKWGLSEPATRLMDAAIYIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAAS +L
Sbjct: 143 MR-GMVQSLNVSVAASALL 160
>gi|417286118|ref|ZP_12073409.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
TW07793]
gi|386251359|gb|EII97526.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
TW07793]
Length = 206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + +ST L+G E G++ + + D + IP
Sbjct: 61 AHLKGQGMQILATHLSDNAVDFREIDYTRSTCILMGQEKTGITQEALALADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|366161290|ref|ZP_09461152.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. TW09308]
gi|432374379|ref|ZP_19617410.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE11]
gi|430893801|gb|ELC16125.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE11]
Length = 229
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + E+ D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALELADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|404367991|ref|ZP_10973350.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium ulcerans
ATCC 49185]
gi|313690571|gb|EFS27406.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium ulcerans
ATCC 49185]
Length = 235
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFHSL 60
+++ I N G L RSA FGV +I+ R + S G+ HV+ ++
Sbjct: 91 LILDEIQDPRNFGALIRSAEVFGVKGIIIPERNAVRVNETVVKTSTGAIEHVDIVKVTNI 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S+A + LK D + G E + + D ++ + TA +LG+EG G+ K E CD + I
Sbjct: 151 SEALLKLKKLDYWVYGAE-GEGSKDYSKEKYPSRTALVLGSEGNGIRKKVKENCDVLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA I+L
Sbjct: 210 PMY-GKINSLNVSVAGGIILSEI 231
>gi|194334189|ref|YP_002016049.1| tRNA/rRNA methyltransferase SpoU [Prosthecochloris aestuarii DSM
271]
gi|194312007|gb|ACF46402.1| tRNA/rRNA methyltransferase (SpoU) [Prosthecochloris aestuarii DSM
271]
Length = 181
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 21/148 (14%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFN--AFGSHGSTSHVNFRHF 57
+++HNI +NVG++ R+A A G+ ++I+ G R++ + A G+ + + F H
Sbjct: 30 IILHNIRSMYNVGSIFRTADAAGIEKVIITGYTATPPRKEIDKTALGAQETMAWEYFAHP 89
Query: 58 HSLSDARVFLKSKDCDICGVEITDNA-----VDVTQHPFKKSTAFLLGNEGMGLSAKECE 112
+ A +K K ICG+EIT N+ VD + P +LGNE G+ E
Sbjct: 90 LEVIPA---MKEKGIAICGLEITTNSRAYTDVDRSDFPL----CLILGNEVQGIDDDILE 142
Query: 113 ICDFFVYIPQYGGGTASLNVTVAASIVL 140
CD + IPQ+ G SLNV+VAA + L
Sbjct: 143 QCDHILEIPQF-GTKHSLNVSVAAGVAL 169
>gi|218697372|ref|YP_002405039.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 55989]
gi|332282578|ref|ZP_08394991.1| tRNA guanosine-2'-O-methyltransferase [Shigella sp. D9]
gi|407471644|ref|YP_006781913.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2009EL-2071]
gi|407479704|ref|YP_006776853.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2011C-3493]
gi|410480262|ref|YP_006767808.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2009EL-2050]
gi|417146958|ref|ZP_11987805.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
1.2264]
gi|417807333|ref|ZP_12454263.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. LB226692]
gi|417835073|ref|ZP_12481513.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 01-09591]
gi|417866219|ref|ZP_12511261.1| hypothetical protein C22711_3149 [Escherichia coli O104:H4 str.
C227-11]
gi|419377761|ref|ZP_13918777.1| spoU rRNA Methylase family protein [Escherichia coli DEC14B]
gi|419383098|ref|ZP_13924040.1| spoU rRNA Methylase family protein [Escherichia coli DEC14C]
gi|419388394|ref|ZP_13929261.1| spoU rRNA Methylase family protein [Escherichia coli DEC14D]
gi|419929124|ref|ZP_14446813.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 541-1]
gi|422989867|ref|ZP_16980639.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. C227-11]
gi|422996762|ref|ZP_16987525.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. C236-11]
gi|423001914|ref|ZP_16992667.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 09-7901]
gi|423005570|ref|ZP_16996315.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 04-8351]
gi|423012076|ref|ZP_17002808.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-3677]
gi|423021303|ref|ZP_17012010.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4404]
gi|423026470|ref|ZP_17017165.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4522]
gi|423032291|ref|ZP_17022977.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4623]
gi|423035162|ref|ZP_17025840.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|423040288|ref|ZP_17030957.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|423046972|ref|ZP_17037631.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|423055511|ref|ZP_17044317.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|423057503|ref|ZP_17046302.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|429721338|ref|ZP_19256257.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9450]
gi|429773236|ref|ZP_19305252.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02030]
gi|429778599|ref|ZP_19310567.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429782435|ref|ZP_19314361.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02092]
gi|429787851|ref|ZP_19319740.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02093]
gi|429793648|ref|ZP_19325492.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02281]
gi|429800229|ref|ZP_19332019.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02318]
gi|429803840|ref|ZP_19335598.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02913]
gi|429808487|ref|ZP_19340204.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-03439]
gi|429814186|ref|ZP_19345859.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-04080]
gi|429819390|ref|ZP_19351021.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-03943]
gi|429905740|ref|ZP_19371716.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429909878|ref|ZP_19375840.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9941]
gi|429915744|ref|ZP_19381690.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429920792|ref|ZP_19386719.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429926600|ref|ZP_19392511.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429930533|ref|ZP_19396432.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429937069|ref|ZP_19402954.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429942753|ref|ZP_19408625.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429945433|ref|ZP_19411293.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429952991|ref|ZP_19418836.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429956348|ref|ZP_19422178.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec12-0466]
gi|432482970|ref|ZP_19724919.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE210]
gi|432752112|ref|ZP_19986688.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE29]
gi|432767044|ref|ZP_20001457.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE48]
gi|432807890|ref|ZP_20041803.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE91]
gi|432829275|ref|ZP_20062890.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE135]
gi|432931151|ref|ZP_20131423.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE184]
gi|433195708|ref|ZP_20379677.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE90]
gi|218354104|emb|CAV00665.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 55989]
gi|332104930|gb|EGJ08276.1| tRNA guanosine-2'-O-methyltransferase [Shigella sp. D9]
gi|340732302|gb|EGR61440.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 01-09591]
gi|340738061|gb|EGR72312.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. LB226692]
gi|341919508|gb|EGT69119.1| hypothetical protein C22711_3149 [Escherichia coli O104:H4 str.
C227-11]
gi|354859002|gb|EHF19451.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. C236-11]
gi|354862889|gb|EHF23326.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. C227-11]
gi|354863456|gb|EHF23889.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 04-8351]
gi|354871493|gb|EHF31891.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 09-7901]
gi|354878028|gb|EHF38386.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-3677]
gi|354886044|gb|EHF46335.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4404]
gi|354890251|gb|EHF50494.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4522]
gi|354893887|gb|EHF54085.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4623]
gi|354905194|gb|EHF65278.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C1]
gi|354908860|gb|EHF68902.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C2]
gi|354910743|gb|EHF70760.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C3]
gi|354913444|gb|EHF73436.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C4]
gi|354920845|gb|EHF80771.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-4632 C5]
gi|378215300|gb|EHX75599.1| spoU rRNA Methylase family protein [Escherichia coli DEC14B]
gi|378225039|gb|EHX85240.1| spoU rRNA Methylase family protein [Escherichia coli DEC14C]
gi|378228392|gb|EHX88550.1| spoU rRNA Methylase family protein [Escherichia coli DEC14D]
gi|386162898|gb|EIH24694.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
1.2264]
gi|388404215|gb|EIL64703.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 541-1]
gi|406775424|gb|AFS54848.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2009EL-2050]
gi|407052001|gb|AFS72052.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2011C-3493]
gi|407067679|gb|AFS88726.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 2009EL-2071]
gi|429356118|gb|EKY92800.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02030]
gi|429357056|gb|EKY93731.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02033-1]
gi|429358747|gb|EKY95415.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02092]
gi|429371668|gb|EKZ08221.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02093]
gi|429373747|gb|EKZ10290.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02281]
gi|429376159|gb|EKZ12689.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02318]
gi|429389026|gb|EKZ25451.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-02913]
gi|429390583|gb|EKZ26994.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-03439]
gi|429391034|gb|EKZ27440.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-03943]
gi|429401463|gb|EKZ37765.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. 11-04080]
gi|429402386|gb|EKZ38677.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9990]
gi|429406326|gb|EKZ42586.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9450]
gi|429414012|gb|EKZ50191.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4984]
gi|429416470|gb|EKZ52626.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4986]
gi|429424228|gb|EKZ60331.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4987]
gi|429428609|gb|EKZ64685.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-4988]
gi|429432663|gb|EKZ68701.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-5603]
gi|429439732|gb|EKZ75713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-5604]
gi|429443896|gb|EKZ79843.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec12-0465]
gi|429448647|gb|EKZ84557.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-6006]
gi|429455120|gb|EKZ90978.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec12-0466]
gi|429458743|gb|EKZ94565.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O104:H4
str. Ec11-9941]
gi|431003988|gb|ELD19221.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE210]
gi|431293042|gb|ELF83422.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE29]
gi|431307044|gb|ELF95345.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE48]
gi|431352747|gb|ELG39512.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE91]
gi|431382218|gb|ELG66558.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE135]
gi|431460586|gb|ELH40874.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE184]
gi|431713156|gb|ELJ77413.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE90]
Length = 229
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|378765082|ref|YP_005193541.1| tRNA guanosine-2'-O-methyltransferase [Pantoea ananatis LMG 5342]
gi|386017720|ref|YP_005936019.1| tRNA guanosine-2'-O-methyltransferase TrmH [Pantoea ananatis
AJ13355]
gi|386077345|ref|YP_005990870.1| tRNA guanosine-2'-O-methyltransferase TrmH [Pantoea ananatis PA13]
gi|327395801|dbj|BAK13223.1| tRNA guanosine-2'-O-methyltransferase TrmH [Pantoea ananatis
AJ13355]
gi|354986526|gb|AER30650.1| tRNA guanosine-2'-O-methyltransferase TrmH [Pantoea ananatis PA13]
gi|365184554|emb|CCF07504.1| tRNA guanosine-2'-O-methyltransferase [Pantoea ananatis LMG 5342]
Length = 233
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R A S GS S VN S++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSQRMRTQASASAGSNSWVNVVTHRSIND 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK+++ I ++ +AVD + + K T L+G E G++ + + D + IP
Sbjct: 82 AISHLKTQNMQILATNLSADAVDFREIDYTKPTCILMGQEKTGITDEALALADRHIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|291619492|ref|YP_003522234.1| TrmH [Pantoea ananatis LMG 20103]
gi|291154522|gb|ADD79106.1| TrmH [Pantoea ananatis LMG 20103]
Length = 233
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R A S GS S VN S++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSQRMRTQASASAGSNSWVNVVTHRSIND 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK+++ I ++ +AVD + + K T L+G E G++ + + D + IP
Sbjct: 82 AISHLKTQNMQILATNLSADAVDFREIDYTKPTCILMGQEKTGITDEALALADRHIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|340751360|ref|ZP_08688181.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
mortiferum ATCC 9817]
gi|229421677|gb|EEO36724.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
mortiferum ATCC 9817]
Length = 235
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF--------GSHGSTSHVNFRHF 57
+++ I N G L RSA FGV +I+ R NA S G+ +V+
Sbjct: 91 LILDEIQDPRNFGALIRSAEVFGVKGIIIPER---NAVRINETVVKTSTGAIEYVDIVKV 147
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
++SDA LK D + G E + + D +Q + TA +LG+EG G+ K E CD
Sbjct: 148 TNISDAISKLKKLDYWVYGAE-GEGSKDYSQEKYPSRTALVLGSEGNGIRKKVKESCDVL 206
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IP Y G SLNV+VA I+L
Sbjct: 207 IKIPMY-GKINSLNVSVAGGIILSEI 231
>gi|300815109|ref|ZP_07095334.1| RNA methyltransferase, TrmH family [Escherichia coli MS 107-1]
gi|415873324|ref|ZP_11540579.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli MS 79-10]
gi|300532001|gb|EFK53063.1| RNA methyltransferase, TrmH family [Escherichia coli MS 107-1]
gi|342930935|gb|EGU99657.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli MS 79-10]
Length = 218
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 71 AVAHLKGRGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|395237736|ref|ZP_10415768.1| putative rRNA methylase [Turicella otitidis ATCC 51513]
gi|423351445|ref|ZP_17329096.1| hypothetical protein HMPREF9719_01391 [Turicella otitidis ATCC
51513]
gi|394486961|emb|CCI83856.1| putative rRNA methylase [Turicella otitidis ATCC 51513]
gi|404386504|gb|EJZ81660.1| hypothetical protein HMPREF9719_01391 [Turicella otitidis ATCC
51513]
Length = 221
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N + N+GT+ R+A AF V + +VGRR +N G+ + + + RH ++++
Sbjct: 73 HVAIENFSNDGNIGTIVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLRHHDTIAELA 132
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +++D I ++ T ++ + + ++G EG G++ + + I Q+
Sbjct: 133 AYARAEDLTIVALDNTPGSIPLETADLPRRCLLIVGQEGPGITDEAAKAASMTCSIAQF- 191
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV VA I +H +
Sbjct: 192 GSTRSINVGVAGGIAMHAW 210
>gi|416900168|ref|ZP_11929479.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli STEC_7v]
gi|417116697|ref|ZP_11967558.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
1.2741]
gi|422801605|ref|ZP_16850101.1| SpoU rRNA methylase [Escherichia coli M863]
gi|323965917|gb|EGB61365.1| SpoU rRNA methylase [Escherichia coli M863]
gi|327250779|gb|EGE62481.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli STEC_7v]
gi|386139241|gb|EIG80396.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
1.2741]
Length = 229
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|325571078|ref|ZP_08146650.1| TrmH family RNA methyltransferase [Enterococcus casseliflavus ATCC
12755]
gi|325156163|gb|EGC68349.1| TrmH family RNA methyltransferase [Enterococcus casseliflavus ATCC
12755]
Length = 253
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+++++ N+ NVGT+ R+A A G S + L G D + S N+ H L
Sbjct: 109 NWLILDNVQDPGNVGTMIRTADAAGFSGVFLGEGTADLYSTKVLRSMQGSNY-HLPILEG 167
Query: 63 A-RVFLK---SKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
A FLK S I G E+ AV T+ P +++ AF+LGNEG G+ + + D V
Sbjct: 168 AIPPFLKQLRSAGVTIYGTELNKEAVPYTELPKEQTAAFILGNEGQGVHPELLALTDKNV 227
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
YIP YG SLNV +AA I+++
Sbjct: 228 YIPIYGQA-ESLNVAIAAGILMY 249
>gi|307314264|ref|ZP_07593872.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W]
gi|378710907|ref|YP_005275800.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KO11FL]
gi|386611022|ref|YP_006126508.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli W]
gi|386699390|ref|YP_006163227.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KO11FL]
gi|386711546|ref|YP_006175267.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W]
gi|418040454|ref|ZP_12678697.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W26]
gi|306906087|gb|EFN36606.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W]
gi|315062939|gb|ADT77266.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli W]
gi|323376468|gb|ADX48736.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KO11FL]
gi|383390917|gb|AFH15875.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KO11FL]
gi|383407238|gb|AFH13481.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W]
gi|383476605|gb|EID68541.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli W26]
Length = 229
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREVDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|16767028|ref|NP_462643.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|167992299|ref|ZP_02573397.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|374978383|ref|ZP_09719726.1| tRNA Guanosine18-2'-O- -methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|378447112|ref|YP_005234744.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|378452628|ref|YP_005239988.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|378701631|ref|YP_005183589.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|378986340|ref|YP_005249496.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378991045|ref|YP_005254209.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|379703005|ref|YP_005244733.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|383498379|ref|YP_005399068.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|422027986|ref|ZP_16374309.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|422033028|ref|ZP_16379118.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|427555638|ref|ZP_18929615.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|427573250|ref|ZP_18934219.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|427594634|ref|ZP_18939127.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|427619161|ref|ZP_18944042.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|427642693|ref|ZP_18948899.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|427658015|ref|ZP_18953641.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|427663245|ref|ZP_18958520.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|427679345|ref|ZP_18963426.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|427801261|ref|ZP_18968868.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|16422312|gb|AAL22602.1| putative tRNA/rRNA methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|205329407|gb|EDZ16171.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261248891|emb|CBG26745.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267996007|gb|ACY90892.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160280|emb|CBW19803.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914769|dbj|BAJ38743.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226797|gb|EFX51847.1| tRNA Guanosine18-2'-O- -methyltransferase [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323132104|gb|ADX19534.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. ST4/74]
gi|332990592|gb|AEF09575.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
gi|380465200|gb|AFD60603.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|414012970|gb|EKS96873.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm1]
gi|414014075|gb|EKS97930.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm8]
gi|414014642|gb|EKS98483.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm2]
gi|414027866|gb|EKT11075.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm9]
gi|414028937|gb|EKT12101.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm3]
gi|414031507|gb|EKT14564.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm4]
gi|414042228|gb|EKT24767.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm6]
gi|414043081|gb|EKT25597.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm10]
gi|414047645|gb|EKT29916.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm11]
gi|414056043|gb|EKT37892.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm12]
gi|414062577|gb|EKT43871.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKSRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|15804192|ref|NP_290231.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EDL933]
gi|15833780|ref|NP_312553.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. Sakai]
gi|16131522|ref|NP_418108.1| tRNA mG18-2'-O-methyltransferase, SAM-dependen [Escherichia coli
str. K-12 substr. MG1655]
gi|24114921|ref|NP_709431.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2a str.
301]
gi|30065073|ref|NP_839244.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2a str.
2457T]
gi|74314114|ref|YP_312533.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei Ss046]
gi|82546080|ref|YP_410027.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii Sb227]
gi|110807671|ref|YP_691191.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 5 str.
8401]
gi|157163132|ref|YP_001460450.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli HS]
gi|168748698|ref|ZP_02773720.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4113]
gi|168753476|ref|ZP_02778483.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4401]
gi|168759772|ref|ZP_02784779.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4501]
gi|168766072|ref|ZP_02791079.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4486]
gi|168772380|ref|ZP_02797387.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4196]
gi|168779807|ref|ZP_02804814.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4076]
gi|168785528|ref|ZP_02810535.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC869]
gi|168798621|ref|ZP_02823628.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC508]
gi|170018119|ref|YP_001723073.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ATCC 8739]
gi|170083158|ref|YP_001732478.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. K-12
substr. DH10B]
gi|188495946|ref|ZP_03003216.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 53638]
gi|191167826|ref|ZP_03029632.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B7A]
gi|193063862|ref|ZP_03044949.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E22]
gi|194430057|ref|ZP_03062562.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B171]
gi|194435953|ref|ZP_03068056.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 101-1]
gi|195936212|ref|ZP_03081594.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4024]
gi|208806132|ref|ZP_03248469.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4206]
gi|208812795|ref|ZP_03254124.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4045]
gi|208819105|ref|ZP_03259425.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4042]
gi|209398863|ref|YP_002273131.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4115]
gi|209921124|ref|YP_002295208.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SE11]
gi|217324129|ref|ZP_03440213.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. TW14588]
gi|218551178|ref|YP_002384969.1| tRNA guanosine-2'-O-methyltransferase [Escherichia fergusonii ATCC
35469]
gi|218556214|ref|YP_002389127.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli IAI1]
gi|238902742|ref|YP_002928538.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli BW2952]
gi|251786902|ref|YP_003001206.1| tRNA (Gm18) 2'-O-methyltransferase [Escherichia coli BL21(DE3)]
gi|253771507|ref|YP_003034338.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163579|ref|YP_003046687.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B str.
REL606]
gi|254290329|ref|YP_003056077.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli
BL21(DE3)]
gi|254795606|ref|YP_003080443.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. TW14359]
gi|260857954|ref|YP_003231845.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. 11368]
gi|260870381|ref|YP_003236783.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O111:H-
str. 11128]
gi|261224166|ref|ZP_05938447.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O157:H7
str. FRIK2000]
gi|261254776|ref|ZP_05947309.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O157:H7
str. FRIK966]
gi|291285022|ref|YP_003501840.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|293463975|ref|ZP_06664389.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B088]
gi|312972063|ref|ZP_07786237.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 1827-70]
gi|331670492|ref|ZP_08371331.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA271]
gi|331679743|ref|ZP_08380413.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H591]
gi|383180829|ref|YP_005458834.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 53G]
gi|384545227|ref|YP_005729291.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2002017]
gi|386593641|ref|YP_006090041.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DH1]
gi|386616471|ref|YP_006136137.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli UMNK88]
gi|386706921|ref|YP_006170768.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli P12b]
gi|387509057|ref|YP_006161313.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|387614317|ref|YP_006117433.1| tRNA (guanosine-2'-O)-methyltransferase [Escherichia coli ETEC
H10407]
gi|387623309|ref|YP_006130937.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DH1]
gi|387884828|ref|YP_006315130.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli Xuzhou21]
gi|388479589|ref|YP_491783.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli str.
K-12 substr. W3110]
gi|404377046|ref|ZP_10982188.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 1_1_43]
gi|415785790|ref|ZP_11493141.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli EPECa14]
gi|415810885|ref|ZP_11503235.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli LT-68]
gi|415821695|ref|ZP_11510476.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli OK1180]
gi|415847827|ref|ZP_11525941.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella sonnei 53G]
gi|416259644|ref|ZP_11640020.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae CDC
74-1112]
gi|416297416|ref|ZP_11651674.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri CDC
796-83]
gi|416315688|ref|ZP_11659501.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. 1044]
gi|416319940|ref|ZP_11662492.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC1212]
gi|416330131|ref|ZP_11669168.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. 1125]
gi|416342072|ref|ZP_11676438.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4100B]
gi|416778382|ref|ZP_11875883.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. G5101]
gi|416789680|ref|ZP_11880728.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H-
str. 493-89]
gi|416801567|ref|ZP_11885668.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H-
str. H 2687]
gi|416812422|ref|ZP_11890586.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
3256-97]
gi|416822696|ref|ZP_11895100.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
USDA 5905]
gi|416833126|ref|ZP_11900198.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. LSU-61]
gi|417133450|ref|ZP_11978235.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
5.0588]
gi|417157483|ref|ZP_11995107.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
96.0497]
gi|417165327|ref|ZP_11999389.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
99.0741]
gi|417173870|ref|ZP_12003666.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.2608]
gi|417185586|ref|ZP_12010987.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
93.0624]
gi|417201992|ref|ZP_12018242.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
4.0522]
gi|417209930|ref|ZP_12021032.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
JB1-95]
gi|417220734|ref|ZP_12024174.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
96.154]
gi|417227628|ref|ZP_12029386.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
5.0959]
gi|417236322|ref|ZP_12034872.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
9.0111]
gi|417249616|ref|ZP_12041400.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
4.0967]
gi|417267022|ref|ZP_12054383.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.3884]
gi|417296353|ref|ZP_12083600.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
900105 (10e)]
gi|417594111|ref|ZP_12244797.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 2534-86]
gi|417604554|ref|ZP_12255117.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_94C]
gi|417610345|ref|ZP_12260838.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_DG131-3]
gi|417625766|ref|ZP_12276056.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_H.1.8]
gi|417641594|ref|ZP_12291720.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli TX1999]
gi|417669152|ref|ZP_12318690.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_O31]
gi|417709897|ref|ZP_12358911.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri VA-6]
gi|417714847|ref|ZP_12363796.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-272]
gi|417725595|ref|ZP_12374376.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-304]
gi|417736005|ref|ZP_12384640.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri
2747-71]
gi|417830232|ref|ZP_12476768.1| spoU rRNA Methylase family protein [Shigella flexneri J1713]
gi|418259818|ref|ZP_12882465.1| spoU rRNA Methylase family protein [Shigella flexneri 6603-63]
gi|418269303|ref|ZP_12887782.1| spoU rRNA Methylase family protein [Shigella sonnei str. Moseley]
gi|418944915|ref|ZP_13497885.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H43
str. T22]
gi|418955941|ref|ZP_13507874.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli J53]
gi|419047579|ref|ZP_13594510.1| spoU rRNA Methylase family protein [Escherichia coli DEC3A]
gi|419059419|ref|ZP_13606219.1| spoU rRNA Methylase family protein [Escherichia coli DEC3C]
gi|419064964|ref|ZP_13611683.1| spoU rRNA Methylase family protein [Escherichia coli DEC3D]
gi|419071926|ref|ZP_13617531.1| spoU rRNA Methylase family protein [Escherichia coli DEC3E]
gi|419077735|ref|ZP_13623235.1| spoU rRNA Methylase family protein [Escherichia coli DEC3F]
gi|419082897|ref|ZP_13628340.1| spoU rRNA Methylase family protein [Escherichia coli DEC4A]
gi|419088772|ref|ZP_13634123.1| spoU rRNA Methylase family protein [Escherichia coli DEC4B]
gi|419094863|ref|ZP_13640138.1| spoU rRNA Methylase family protein [Escherichia coli DEC4C]
gi|419100574|ref|ZP_13645761.1| spoU rRNA Methylase family protein [Escherichia coli DEC4D]
gi|419106311|ref|ZP_13651432.1| spoU rRNA Methylase family protein [Escherichia coli DEC4E]
gi|419111692|ref|ZP_13656743.1| spoU rRNA Methylase family protein [Escherichia coli DEC4F]
gi|419113662|ref|ZP_13658695.1| spoU rRNA Methylase family protein [Escherichia coli DEC5A]
gi|419122975|ref|ZP_13667915.1| spoU rRNA Methylase family protein [Escherichia coli DEC5B]
gi|419128404|ref|ZP_13673274.1| spoU rRNA Methylase family protein [Escherichia coli DEC5C]
gi|419172531|ref|ZP_13716405.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC7A]
gi|419177337|ref|ZP_13721145.1| spoU rRNA Methylase family protein [Escherichia coli DEC7B]
gi|419183094|ref|ZP_13726702.1| spoU rRNA Methylase family protein [Escherichia coli DEC7C]
gi|419188710|ref|ZP_13732214.1| spoU rRNA Methylase family protein [Escherichia coli DEC7D]
gi|419194093|ref|ZP_13737530.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC7E]
gi|419199422|ref|ZP_13742711.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC8A]
gi|419205855|ref|ZP_13749010.1| spoU rRNA Methylase family protein [Escherichia coli DEC8B]
gi|419212149|ref|ZP_13755212.1| spoU rRNA Methylase family protein [Escherichia coli DEC8C]
gi|419223833|ref|ZP_13766743.1| spoU rRNA Methylase family protein [Escherichia coli DEC8E]
gi|419229441|ref|ZP_13772275.1| spoU rRNA Methylase family protein [Escherichia coli DEC9A]
gi|419234913|ref|ZP_13777677.1| spoU rRNA Methylase family protein [Escherichia coli DEC9B]
gi|419240307|ref|ZP_13783009.1| spoU rRNA Methylase family protein [Escherichia coli DEC9C]
gi|419245745|ref|ZP_13788375.1| spoU rRNA Methylase family protein [Escherichia coli DEC9D]
gi|419251668|ref|ZP_13794232.1| spoU rRNA Methylase family protein [Escherichia coli DEC9E]
gi|419257579|ref|ZP_13800074.1| spoU rRNA Methylase family protein [Escherichia coli DEC10A]
gi|419263704|ref|ZP_13806107.1| spoU rRNA Methylase family protein [Escherichia coli DEC10B]
gi|419269859|ref|ZP_13812199.1| spoU rRNA Methylase family protein [Escherichia coli DEC10C]
gi|419275098|ref|ZP_13817383.1| spoU rRNA Methylase family protein [Escherichia coli DEC10D]
gi|419286786|ref|ZP_13828944.1| spoU rRNA Methylase family protein [Escherichia coli DEC10F]
gi|419291872|ref|ZP_13833955.1| spoU rRNA Methylase family protein [Escherichia coli DEC11A]
gi|419297153|ref|ZP_13839188.1| spoU rRNA Methylase family protein [Escherichia coli DEC11B]
gi|419302746|ref|ZP_13844737.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11C]
gi|419308687|ref|ZP_13850576.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11D]
gi|419313708|ref|ZP_13855566.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11E]
gi|419319151|ref|ZP_13860946.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC12A]
gi|419325519|ref|ZP_13867200.1| spoU rRNA Methylase family protein [Escherichia coli DEC12B]
gi|419331363|ref|ZP_13872955.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC12C]
gi|419336959|ref|ZP_13878469.1| spoU rRNA Methylase family protein [Escherichia coli DEC12D]
gi|419342242|ref|ZP_13883695.1| spoU rRNA Methylase family protein [Escherichia coli DEC12E]
gi|419347431|ref|ZP_13888798.1| spoU rRNA Methylase family protein [Escherichia coli DEC13A]
gi|419351892|ref|ZP_13893219.1| spoU rRNA Methylase family protein [Escherichia coli DEC13B]
gi|419357359|ref|ZP_13898605.1| spoU rRNA Methylase family protein [Escherichia coli DEC13C]
gi|419362335|ref|ZP_13903541.1| spoU rRNA Methylase family protein [Escherichia coli DEC13D]
gi|419367190|ref|ZP_13908339.1| spoU rRNA Methylase family protein [Escherichia coli DEC13E]
gi|419372256|ref|ZP_13913365.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC14A]
gi|419394111|ref|ZP_13934906.1| spoU rRNA Methylase family protein [Escherichia coli DEC15A]
gi|419398929|ref|ZP_13939691.1| spoU rRNA Methylase family protein [Escherichia coli DEC15B]
gi|419404204|ref|ZP_13944921.1| spoU rRNA Methylase family protein [Escherichia coli DEC15C]
gi|419409366|ref|ZP_13950049.1| spoU rRNA Methylase family protein [Escherichia coli DEC15D]
gi|419414918|ref|ZP_13955551.1| spoU rRNA Methylase family protein [Escherichia coli DEC15E]
gi|419702490|ref|ZP_14230083.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SCI-07]
gi|419810714|ref|ZP_14335593.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O32:H37
str. P4]
gi|419867078|ref|ZP_14389416.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O103:H25
str. CVM9340]
gi|419872349|ref|ZP_14394386.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O103:H2
str. CVM9450]
gi|419877549|ref|ZP_14399108.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9534]
gi|419883317|ref|ZP_14404438.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9545]
gi|419890056|ref|ZP_14410364.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9570]
gi|419898354|ref|ZP_14417914.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9574]
gi|419903545|ref|ZP_14422604.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM9942]
gi|419907346|ref|ZP_14426180.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10026]
gi|419924751|ref|ZP_14442625.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 541-15]
gi|419949629|ref|ZP_14465868.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CUMT8]
gi|420087523|ref|ZP_14599482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9602]
gi|420097286|ref|ZP_14608589.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9634]
gi|420103493|ref|ZP_14614351.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9455]
gi|420110213|ref|ZP_14620235.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9553]
gi|420113775|ref|ZP_14623485.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10021]
gi|420120504|ref|ZP_14629713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10030]
gi|420127056|ref|ZP_14635736.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10224]
gi|420133936|ref|ZP_14642095.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM9952]
gi|420271982|ref|ZP_14774332.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA22]
gi|420277727|ref|ZP_14780006.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA40]
gi|420282563|ref|ZP_14784795.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW06591]
gi|420294093|ref|ZP_14796207.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW11039]
gi|420300697|ref|ZP_14802740.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09109]
gi|420306566|ref|ZP_14808554.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW10119]
gi|420311487|ref|ZP_14813416.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1738]
gi|420317660|ref|ZP_14819529.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1734]
gi|420322862|ref|ZP_14824679.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2850-71]
gi|420327956|ref|ZP_14829694.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri CCH060]
gi|420333782|ref|ZP_14835414.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-1770]
gi|420344240|ref|ZP_14845697.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-404]
gi|420355206|ref|ZP_14856279.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii 4444-74]
gi|420361016|ref|ZP_14861964.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 3226-85]
gi|420365619|ref|ZP_14866482.1| spoU rRNA Methylase family protein [Shigella sonnei 4822-66]
gi|420376948|ref|ZP_14876632.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 1235-66]
gi|420382916|ref|ZP_14882341.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae 225-75]
gi|420387954|ref|ZP_14887287.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EPECa12]
gi|421777558|ref|ZP_16214152.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli AD30]
gi|421814640|ref|ZP_16250341.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0416]
gi|421826530|ref|ZP_16261883.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK920]
gi|421827616|ref|ZP_16262954.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA7]
gi|422764176|ref|ZP_16817928.1| SpoU rRNA methylase [Escherichia coli E1167]
gi|422768559|ref|ZP_16822283.1| SpoU rRNA methylase [Escherichia coli E1520]
gi|422773216|ref|ZP_16826901.1| SpoU rRNA methylase [Escherichia coli E482]
gi|422778219|ref|ZP_16831869.1| SpoU rRNA methylase [Escherichia coli H120]
gi|422783755|ref|ZP_16836538.1| SpoU rRNA methylase [Escherichia coli TW10509]
gi|422788496|ref|ZP_16841232.1| SpoU rRNA methylase [Escherichia coli H489]
gi|422792242|ref|ZP_16844943.1| SpoU rRNA methylase [Escherichia coli TA007]
gi|422807700|ref|ZP_16856129.1| SpoU rRNA methylase [Escherichia fergusonii B253]
gi|422961914|ref|ZP_16972650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H494]
gi|423707966|ref|ZP_17682346.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B799]
gi|423727709|ref|ZP_17701573.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA31]
gi|424079910|ref|ZP_17816865.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA505]
gi|424086313|ref|ZP_17822794.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA517]
gi|424092721|ref|ZP_17828643.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1996]
gi|424099398|ref|ZP_17834660.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1985]
gi|424105601|ref|ZP_17840334.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1990]
gi|424112247|ref|ZP_17846469.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93-001]
gi|424124379|ref|ZP_17857675.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA5]
gi|424130545|ref|ZP_17863442.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA9]
gi|424136854|ref|ZP_17869290.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA10]
gi|424143407|ref|ZP_17875260.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA14]
gi|424149795|ref|ZP_17881161.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA15]
gi|424155681|ref|ZP_17886573.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA24]
gi|424255914|ref|ZP_17892119.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA25]
gi|424334952|ref|ZP_17898053.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA28]
gi|424452092|ref|ZP_17903748.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA32]
gi|424458275|ref|ZP_17909374.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA33]
gi|424464786|ref|ZP_17915130.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA39]
gi|424471047|ref|ZP_17920845.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA41]
gi|424477542|ref|ZP_17926849.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA42]
gi|424483329|ref|ZP_17932299.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW07945]
gi|424489511|ref|ZP_17938048.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09098]
gi|424496198|ref|ZP_17943758.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09195]
gi|424502836|ref|ZP_17949715.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4203]
gi|424509099|ref|ZP_17955467.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4196]
gi|424516489|ref|ZP_17961092.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW14313]
gi|424522638|ref|ZP_17966740.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW14301]
gi|424540719|ref|ZP_17983653.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4013]
gi|424546871|ref|ZP_17989216.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4402]
gi|424553078|ref|ZP_17994906.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4439]
gi|424559279|ref|ZP_18000674.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4436]
gi|424565613|ref|ZP_18006606.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4437]
gi|424571729|ref|ZP_18012264.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4448]
gi|424749792|ref|ZP_18177871.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CFSAN001629]
gi|424760097|ref|ZP_18187743.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CFSAN001630]
gi|424773495|ref|ZP_18200555.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CFSAN001632]
gi|424818437|ref|ZP_18243588.1| tRNA guanosine-2'-O-methyltransferase [Escherichia fergusonii
ECD227]
gi|424840044|ref|ZP_18264681.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 5a str.
M90T]
gi|425106474|ref|ZP_18508780.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5.2239]
gi|425134176|ref|ZP_18535016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.2524]
gi|425140768|ref|ZP_18541139.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0833]
gi|425146439|ref|ZP_18546420.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0869]
gi|425188921|ref|ZP_18586182.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1997]
gi|425195655|ref|ZP_18592415.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE1487]
gi|425214268|ref|ZP_18609659.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA4]
gi|425220395|ref|ZP_18615347.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA23]
gi|425227034|ref|ZP_18621491.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA49]
gi|425233198|ref|ZP_18627227.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA45]
gi|425239121|ref|ZP_18632831.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TT12B]
gi|425245353|ref|ZP_18638650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli MA6]
gi|425251550|ref|ZP_18644482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5905]
gi|425263600|ref|ZP_18655585.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC96038]
gi|425269587|ref|ZP_18661206.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5412]
gi|425297053|ref|ZP_18687194.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA38]
gi|425307457|ref|ZP_18697126.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli N1]
gi|425313754|ref|ZP_18702919.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1735]
gi|425319735|ref|ZP_18708511.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1736]
gi|425325852|ref|ZP_18714188.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1737]
gi|425332176|ref|ZP_18719997.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1846]
gi|425338352|ref|ZP_18725694.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1847]
gi|425350503|ref|ZP_18736958.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1849]
gi|425356775|ref|ZP_18742831.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1850]
gi|425362734|ref|ZP_18748370.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1856]
gi|425368973|ref|ZP_18754068.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1862]
gi|425375294|ref|ZP_18759923.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1864]
gi|425381971|ref|ZP_18765955.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1865]
gi|425394875|ref|ZP_18777972.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1868]
gi|425407061|ref|ZP_18789271.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1870]
gi|425413423|ref|ZP_18795175.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE098]
gi|425419734|ref|ZP_18800994.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK523]
gi|425424663|ref|ZP_18805811.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 0.1288]
gi|425431034|ref|ZP_18811632.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 0.1304]
gi|427806849|ref|ZP_18973916.1| putative RNA methylase [Escherichia coli chi7122]
gi|427811435|ref|ZP_18978500.1| putative RNA methylase [Escherichia coli]
gi|428949445|ref|ZP_19021707.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.1467]
gi|428955515|ref|ZP_19027297.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.1042]
gi|428968123|ref|ZP_19038824.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.0091]
gi|428980282|ref|ZP_19050086.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.2281]
gi|428986058|ref|ZP_19055439.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93.0055]
gi|428992230|ref|ZP_19061208.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93.0056]
gi|428998122|ref|ZP_19066704.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 94.0618]
gi|429004475|ref|ZP_19072551.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0183]
gi|429010487|ref|ZP_19077916.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.1288]
gi|429017008|ref|ZP_19083879.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0943]
gi|429022841|ref|ZP_19089347.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0428]
gi|429028922|ref|ZP_19094898.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0427]
gi|429046974|ref|ZP_19111676.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0107]
gi|429052382|ref|ZP_19116941.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0003]
gi|429057919|ref|ZP_19122177.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.1742]
gi|429069628|ref|ZP_19133068.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0672]
gi|429080636|ref|ZP_19143764.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0713]
gi|432367138|ref|ZP_19610252.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE10]
gi|432378828|ref|ZP_19621809.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE12]
gi|432419185|ref|ZP_19661776.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE44]
gi|432528496|ref|ZP_19765568.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE233]
gi|432577929|ref|ZP_19814375.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE56]
gi|432629286|ref|ZP_19865251.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE77]
gi|432672759|ref|ZP_19908277.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE119]
gi|432720798|ref|ZP_19955759.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE9]
gi|432794903|ref|ZP_20028981.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE78]
gi|432796420|ref|ZP_20030457.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE79]
gi|432811402|ref|ZP_20045258.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE101]
gi|432836599|ref|ZP_20070129.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE136]
gi|432878018|ref|ZP_20095467.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE154]
gi|432965415|ref|ZP_20154338.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE203]
gi|433094053|ref|ZP_20280301.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE138]
gi|433132238|ref|ZP_20317659.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE163]
gi|433136913|ref|ZP_20322236.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE166]
gi|433200423|ref|ZP_20384305.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE94]
gi|442600184|ref|ZP_21017876.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443619724|ref|YP_007383580.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli APEC O78]
gi|444932944|ref|ZP_21251958.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0814]
gi|444938422|ref|ZP_21257162.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0815]
gi|444944014|ref|ZP_21262503.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0816]
gi|444949435|ref|ZP_21267729.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0839]
gi|444955153|ref|ZP_21273222.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0848]
gi|444960539|ref|ZP_21278365.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1753]
gi|444965736|ref|ZP_21283301.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1775]
gi|444971772|ref|ZP_21289114.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1793]
gi|444982419|ref|ZP_21299319.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ATCC
700728]
gi|444998392|ref|ZP_21314883.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA13]
gi|445003937|ref|ZP_21320318.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA2]
gi|445009293|ref|ZP_21325524.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA47]
gi|445014425|ref|ZP_21330522.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA48]
gi|445025708|ref|ZP_21341524.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 7.1982]
gi|445036588|ref|ZP_21352108.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1762]
gi|445042263|ref|ZP_21357627.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA35]
gi|445047473|ref|ZP_21362713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 3.4880]
gi|445053042|ref|ZP_21368057.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0083]
gi|445061074|ref|ZP_21373584.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0670]
gi|450225362|ref|ZP_21897360.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O08]
gi|450252543|ref|ZP_21902129.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli S17]
gi|452968950|ref|ZP_21967177.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4009]
gi|84029291|sp|P0AGJ3.1|TRMH_ECO57 RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase
gi|84029292|sp|P0AGJ2.1|TRMH_ECOLI RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase
gi|84029293|sp|P0AGJ4.1|TRMH_SHIFL RecName: Full=tRNA (guanosine(18)-2'-O)-methyltransferase; AltName:
Full=tRNA [Gm18] methyltransferase
gi|12518410|gb|AAG58795.1|AE005592_6 putative RNA methylase [Escherichia coli O157:H7 str. EDL933]
gi|147866|gb|AAB00161.1| spoU [Escherichia coli]
gi|290501|gb|AAA62004.1| spoU [Escherichia coli]
gi|1790083|gb|AAC76675.1| tRNA mG18-2'-O-methyltransferase, SAM-dependent [Escherichia coli
str. K-12 substr. MG1655]
gi|13364001|dbj|BAB37949.1| putative RNA methylase [Escherichia coli O157:H7 str. Sakai]
gi|24054164|gb|AAN45138.1| putative RNA methylase [Shigella flexneri 2a str. 301]
gi|30043334|gb|AAP19055.1| putative RNA methylase [Shigella flexneri 2a str. 2457T]
gi|73857591|gb|AAZ90298.1| putative RNA methylase [Shigella sonnei Ss046]
gi|81247491|gb|ABB68199.1| putative RNA methylase [Shigella boydii Sb227]
gi|85676392|dbj|BAE77642.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli str. K12
substr. W3110]
gi|110617219|gb|ABF05886.1| putative RNA methylase [Shigella flexneri 5 str. 8401]
gi|157068812|gb|ABV08067.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli HS]
gi|169753047|gb|ACA75746.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ATCC 8739]
gi|169890993|gb|ACB04700.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli str.
K-12 substr. DH10B]
gi|187771590|gb|EDU35434.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4196]
gi|188017001|gb|EDU55123.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4113]
gi|188491145|gb|EDU66248.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 53638]
gi|189002529|gb|EDU71515.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4076]
gi|189359254|gb|EDU77673.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4401]
gi|189364456|gb|EDU82875.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4486]
gi|189369492|gb|EDU87908.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4501]
gi|189374444|gb|EDU92860.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC869]
gi|189378798|gb|EDU97214.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC508]
gi|190902169|gb|EDV61912.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B7A]
gi|192930577|gb|EDV83184.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E22]
gi|194411884|gb|EDX28201.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B171]
gi|194425496|gb|EDX41480.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 101-1]
gi|208725933|gb|EDZ75534.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4206]
gi|208734072|gb|EDZ82759.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4045]
gi|208739228|gb|EDZ86910.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4042]
gi|209160263|gb|ACI37696.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC4115]
gi|209754528|gb|ACI75571.1| putative RNA methylase [Escherichia coli]
gi|209754530|gb|ACI75572.1| putative RNA methylase [Escherichia coli]
gi|209754532|gb|ACI75573.1| putative RNA methylase [Escherichia coli]
gi|209754534|gb|ACI75574.1| putative RNA methylase [Escherichia coli]
gi|209754536|gb|ACI75575.1| putative RNA methylase [Escherichia coli]
gi|209914383|dbj|BAG79457.1| putative RNA methyltransferase [Escherichia coli SE11]
gi|217320350|gb|EEC28774.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. TW14588]
gi|218358719|emb|CAQ91377.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia fergusonii
ATCC 35469]
gi|218362982|emb|CAR00620.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli IAI1]
gi|226838817|gb|EEH70844.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 1_1_43]
gi|238863706|gb|ACR65704.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli BW2952]
gi|242379175|emb|CAQ33977.1| tRNA (Gm18) 2'-O-methyltransferase [Escherichia coli BL21(DE3)]
gi|253322551|gb|ACT27153.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975480|gb|ACT41151.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli B str.
REL606]
gi|253979636|gb|ACT45306.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli
BL21(DE3)]
gi|254595006|gb|ACT74367.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O157:H7
str. TW14359]
gi|257756603|dbj|BAI28105.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O26:H11
str. 11368]
gi|257766737|dbj|BAI38232.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O111:H-
str. 11128]
gi|260447330|gb|ACX37752.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DH1]
gi|281603014|gb|ADA75998.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2002017]
gi|290764895|gb|ADD58856.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
CB9615]
gi|291321607|gb|EFE61043.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B088]
gi|309704053|emb|CBJ03399.1| tRNA (guanosine-2'-O)-methyltransferase [Escherichia coli ETEC
H10407]
gi|310334440|gb|EFQ00645.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 1827-70]
gi|315138233|dbj|BAJ45392.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DH1]
gi|320177349|gb|EFW52351.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae CDC
74-1112]
gi|320185701|gb|EFW60459.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri CDC
796-83]
gi|320191296|gb|EFW65946.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. EC1212]
gi|320201323|gb|EFW75904.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4100B]
gi|320639558|gb|EFX09166.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. G5101]
gi|320644997|gb|EFX14027.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H-
str. 493-89]
gi|320650264|gb|EFX18753.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H-
str. H 2687]
gi|320655616|gb|EFX23544.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661350|gb|EFX28774.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666364|gb|EFX33363.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. LSU-61]
gi|323155304|gb|EFZ41487.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli EPECa14]
gi|323166862|gb|EFZ52601.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella sonnei 53G]
gi|323173260|gb|EFZ58889.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli LT-68]
gi|323177656|gb|EFZ63240.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli OK1180]
gi|323934804|gb|EGB31186.1| SpoU rRNA methylase [Escherichia coli E1520]
gi|323939589|gb|EGB35795.1| SpoU rRNA methylase [Escherichia coli E482]
gi|323944104|gb|EGB40184.1| SpoU rRNA methylase [Escherichia coli H120]
gi|323959899|gb|EGB55547.1| SpoU rRNA methylase [Escherichia coli H489]
gi|323971293|gb|EGB66538.1| SpoU rRNA methylase [Escherichia coli TA007]
gi|323975130|gb|EGB70235.1| SpoU rRNA methylase [Escherichia coli TW10509]
gi|324111545|gb|EGC05526.1| SpoU rRNA methylase [Escherichia fergusonii B253]
gi|324116010|gb|EGC09936.1| SpoU rRNA methylase [Escherichia coli E1167]
gi|325499457|gb|EGC97316.1| tRNA guanosine-2'-O-methyltransferase [Escherichia fergusonii
ECD227]
gi|326337349|gb|EGD61184.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. 1044]
gi|326339847|gb|EGD63654.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H7
str. 1125]
gi|331062554|gb|EGI34474.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA271]
gi|331072915|gb|EGI44240.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H591]
gi|332345640|gb|AEE58974.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli UMNK88]
gi|332751201|gb|EGJ81604.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri
2747-71]
gi|332996123|gb|EGK15750.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri VA-6]
gi|332997752|gb|EGK17363.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-272]
gi|333012867|gb|EGK32244.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-304]
gi|335572887|gb|EGM59250.1| spoU rRNA Methylase family protein [Shigella flexneri J1713]
gi|345331218|gb|EGW63678.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 2534-86]
gi|345347430|gb|EGW79740.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_94C]
gi|345354352|gb|EGW86577.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_DG131-3]
gi|345373014|gb|EGX04976.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_H.1.8]
gi|345390558|gb|EGX20356.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli TX1999]
gi|359333796|dbj|BAL40243.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli str.
K-12 substr. MDS42]
gi|371592656|gb|EHN81553.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H494]
gi|374361051|gb|AEZ42758.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O55:H7 str.
RM12579]
gi|375319774|gb|EHS65849.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O157:H43
str. T22]
gi|377889529|gb|EHU53989.1| spoU rRNA Methylase family protein [Escherichia coli DEC3A]
gi|377902641|gb|EHU66944.1| spoU rRNA Methylase family protein [Escherichia coli DEC3C]
gi|377906859|gb|EHU71100.1| spoU rRNA Methylase family protein [Escherichia coli DEC3D]
gi|377907551|gb|EHU71775.1| spoU rRNA Methylase family protein [Escherichia coli DEC3E]
gi|377917783|gb|EHU81839.1| spoU rRNA Methylase family protein [Escherichia coli DEC3F]
gi|377923543|gb|EHU87507.1| spoU rRNA Methylase family protein [Escherichia coli DEC4A]
gi|377927834|gb|EHU91749.1| spoU rRNA Methylase family protein [Escherichia coli DEC4B]
gi|377937772|gb|EHV01546.1| spoU rRNA Methylase family protein [Escherichia coli DEC4D]
gi|377938128|gb|EHV01897.1| spoU rRNA Methylase family protein [Escherichia coli DEC4C]
gi|377944186|gb|EHV07891.1| spoU rRNA Methylase family protein [Escherichia coli DEC4E]
gi|377954715|gb|EHV18274.1| spoU rRNA Methylase family protein [Escherichia coli DEC4F]
gi|377962280|gb|EHV25741.1| spoU rRNA Methylase family protein [Escherichia coli DEC5B]
gi|377965212|gb|EHV28637.1| spoU rRNA Methylase family protein [Escherichia coli DEC5A]
gi|377970032|gb|EHV33404.1| spoU rRNA Methylase family protein [Escherichia coli DEC5C]
gi|378011712|gb|EHV74650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC7A]
gi|378021306|gb|EHV84019.1| spoU rRNA Methylase family protein [Escherichia coli DEC7C]
gi|378024730|gb|EHV87383.1| spoU rRNA Methylase family protein [Escherichia coli DEC7D]
gi|378029379|gb|EHV91991.1| spoU rRNA Methylase family protein [Escherichia coli DEC7B]
gi|378034514|gb|EHV97079.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC7E]
gi|378043490|gb|EHW05925.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC8A]
gi|378043866|gb|EHW06296.1| spoU rRNA Methylase family protein [Escherichia coli DEC8B]
gi|378048941|gb|EHW11292.1| spoU rRNA Methylase family protein [Escherichia coli DEC8C]
gi|378061534|gb|EHW23718.1| spoU rRNA Methylase family protein [Escherichia coli DEC8E]
gi|378068322|gb|EHW30425.1| spoU rRNA Methylase family protein [Escherichia coli DEC9A]
gi|378073603|gb|EHW35649.1| spoU rRNA Methylase family protein [Escherichia coli DEC9B]
gi|378079382|gb|EHW41359.1| spoU rRNA Methylase family protein [Escherichia coli DEC9C]
gi|378086882|gb|EHW48752.1| spoU rRNA Methylase family protein [Escherichia coli DEC9D]
gi|378089351|gb|EHW51194.1| spoU rRNA Methylase family protein [Escherichia coli DEC9E]
gi|378096086|gb|EHW57862.1| spoU rRNA Methylase family protein [Escherichia coli DEC10A]
gi|378101639|gb|EHW63324.1| spoU rRNA Methylase family protein [Escherichia coli DEC10B]
gi|378106552|gb|EHW68181.1| spoU rRNA Methylase family protein [Escherichia coli DEC10C]
gi|378112710|gb|EHW74284.1| spoU rRNA Methylase family protein [Escherichia coli DEC10D]
gi|378124799|gb|EHW86203.1| spoU rRNA Methylase family protein [Escherichia coli DEC10F]
gi|378125315|gb|EHW86716.1| spoU rRNA Methylase family protein [Escherichia coli DEC11A]
gi|378138480|gb|EHW99734.1| spoU rRNA Methylase family protein [Escherichia coli DEC11B]
gi|378144458|gb|EHX05630.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11D]
gi|378146587|gb|EHX07738.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11C]
gi|378155627|gb|EHX16686.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC11E]
gi|378160994|gb|EHX21979.1| spoU rRNA Methylase family protein [Escherichia coli DEC12B]
gi|378165287|gb|EHX26223.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC12A]
gi|378165634|gb|EHX26565.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC12C]
gi|378179029|gb|EHX39769.1| spoU rRNA Methylase family protein [Escherichia coli DEC12D]
gi|378182575|gb|EHX43225.1| spoU rRNA Methylase family protein [Escherichia coli DEC13A]
gi|378183155|gb|EHX43801.1| spoU rRNA Methylase family protein [Escherichia coli DEC12E]
gi|378195792|gb|EHX56283.1| spoU rRNA Methylase family protein [Escherichia coli DEC13B]
gi|378196067|gb|EHX56557.1| spoU rRNA Methylase family protein [Escherichia coli DEC13C]
gi|378198907|gb|EHX59376.1| spoU rRNA Methylase family protein [Escherichia coli DEC13D]
gi|378209847|gb|EHX70214.1| spoU rRNA Methylase family protein [Escherichia coli DEC13E]
gi|378213883|gb|EHX74195.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC14A]
gi|378233212|gb|EHX93302.1| spoU rRNA Methylase family protein [Escherichia coli DEC15A]
gi|378240831|gb|EHY00801.1| spoU rRNA Methylase family protein [Escherichia coli DEC15B]
gi|378243021|gb|EHY02968.1| spoU rRNA Methylase family protein [Escherichia coli DEC15C]
gi|378252001|gb|EHY11896.1| spoU rRNA Methylase family protein [Escherichia coli DEC15D]
gi|378256473|gb|EHY16324.1| spoU rRNA Methylase family protein [Escherichia coli DEC15E]
gi|380346318|gb|EIA34613.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SCI-07]
gi|383105089|gb|AFG42598.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli P12b]
gi|383469096|gb|EID64117.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 5a str.
M90T]
gi|384381332|gb|EIE39191.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli J53]
gi|385156349|gb|EIF18346.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O32:H37
str. P4]
gi|385708879|gb|EIG45881.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B799]
gi|386151304|gb|EIH02593.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
5.0588]
gi|386166233|gb|EIH32753.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
96.0497]
gi|386172307|gb|EIH44337.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
99.0741]
gi|386176562|gb|EIH54041.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.2608]
gi|386182886|gb|EIH65642.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
93.0624]
gi|386186879|gb|EIH75702.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
4.0522]
gi|386195983|gb|EIH90211.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
JB1-95]
gi|386200536|gb|EIH99526.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
96.154]
gi|386206963|gb|EII11468.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
5.0959]
gi|386214621|gb|EII25037.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
9.0111]
gi|386219937|gb|EII36401.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
4.0967]
gi|386229380|gb|EII56735.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.3884]
gi|386259797|gb|EIJ15271.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
900105 (10e)]
gi|386798286|gb|AFJ31320.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli Xuzhou21]
gi|388333279|gb|EIK99915.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O103:H25
str. CVM9340]
gi|388334743|gb|EIL01325.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O103:H2
str. CVM9450]
gi|388339575|gb|EIL05930.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9534]
gi|388353982|gb|EIL18946.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9574]
gi|388355619|gb|EIL20442.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9570]
gi|388358760|gb|EIL23161.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9545]
gi|388370673|gb|EIL34189.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM9942]
gi|388377220|gb|EIL40046.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10026]
gi|388388864|gb|EIL50412.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 541-15]
gi|388418730|gb|EIL78512.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CUMT8]
gi|390638081|gb|EIN17602.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1996]
gi|390638873|gb|EIN18364.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA505]
gi|390639496|gb|EIN18970.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA517]
gi|390656833|gb|EIN34674.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1985]
gi|390657290|gb|EIN35114.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93-001]
gi|390660441|gb|EIN38146.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1990]
gi|390678043|gb|EIN54042.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA5]
gi|390681307|gb|EIN57101.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA9]
gi|390692742|gb|EIN67404.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA10]
gi|390696995|gb|EIN71430.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA14]
gi|390698071|gb|EIN72462.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA15]
gi|390711657|gb|EIN84618.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA22]
gi|390718891|gb|EIN91633.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA25]
gi|390719640|gb|EIN92364.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA24]
gi|390724775|gb|EIN97315.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA28]
gi|390737917|gb|EIO09159.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA31]
gi|390738662|gb|EIO09868.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA32]
gi|390741990|gb|EIO13016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA33]
gi|390755924|gb|EIO25445.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA40]
gi|390760473|gb|EIO29800.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA39]
gi|390763639|gb|EIO32874.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA41]
gi|390765720|gb|EIO34877.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA42]
gi|390779354|gb|EIO47068.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW06591]
gi|390786364|gb|EIO53879.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW07945]
gi|390794551|gb|EIO61841.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW11039]
gi|390800890|gb|EIO67960.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09098]
gi|390805068|gb|EIO72016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09109]
gi|390814281|gb|EIO80861.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW10119]
gi|390822976|gb|EIO89054.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4203]
gi|390823682|gb|EIO89721.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW09195]
gi|390827948|gb|EIO93648.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4196]
gi|390841573|gb|EIP05487.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW14313]
gi|390843340|gb|EIP07141.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW14301]
gi|390863039|gb|EIP25196.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4013]
gi|390867079|gb|EIP28933.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4402]
gi|390875446|gb|EIP36472.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4439]
gi|390881026|gb|EIP41668.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4436]
gi|390890715|gb|EIP50374.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4437]
gi|390892513|gb|EIP52099.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4448]
gi|390898844|gb|EIP58105.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1738]
gi|390905974|gb|EIP64888.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1734]
gi|391244280|gb|EIQ03565.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-1770]
gi|391244421|gb|EIQ03705.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 2850-71]
gi|391245621|gb|EIQ04888.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri CCH060]
gi|391261523|gb|EIQ20570.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-404]
gi|391273194|gb|EIQ32021.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii 4444-74]
gi|391277912|gb|EIQ36636.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 3226-85]
gi|391291941|gb|EIQ50301.1| spoU rRNA Methylase family protein [Shigella sonnei 4822-66]
gi|391297782|gb|EIQ55821.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae 225-75]
gi|391299139|gb|EIQ57105.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 1235-66]
gi|391301972|gb|EIQ59849.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EPECa12]
gi|394384818|gb|EJE62371.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9634]
gi|394390300|gb|EJE67319.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10224]
gi|394392836|gb|EJE69570.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CVM9602]
gi|394404323|gb|EJE79737.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9553]
gi|394407623|gb|EJE82435.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CVM9455]
gi|394410915|gb|EJE85232.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10021]
gi|394423468|gb|EJE96714.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM9952]
gi|394429267|gb|EJF01706.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CVM10030]
gi|397783245|gb|EJK94105.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_O31]
gi|397893989|gb|EJL10441.1| spoU rRNA Methylase family protein [Shigella flexneri 6603-63]
gi|397895666|gb|EJL12092.1| spoU rRNA Methylase family protein [Shigella sonnei str. Moseley]
gi|408064914|gb|EKG99395.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK920]
gi|408074204|gb|EKH08489.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA7]
gi|408101233|gb|EKH33697.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1997]
gi|408106085|gb|EKH38206.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE1487]
gi|408125257|gb|EKH55868.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA4]
gi|408135058|gb|EKH64863.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA23]
gi|408137289|gb|EKH66994.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA49]
gi|408144159|gb|EKH73407.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA45]
gi|408152481|gb|EKH80914.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TT12B]
gi|408157570|gb|EKH85714.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli MA6]
gi|408161594|gb|EKH89541.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5905]
gi|408177617|gb|EKI04391.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC96038]
gi|408180879|gb|EKI07475.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5412]
gi|408213861|gb|EKI38339.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA38]
gi|408224115|gb|EKI47843.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1735]
gi|408225322|gb|EKI49005.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli N1]
gi|408235536|gb|EKI58482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1736]
gi|408238958|gb|EKI61731.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1737]
gi|408243979|gb|EKI66456.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1846]
gi|408252513|gb|EKI74157.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1847]
gi|408263181|gb|EKI84053.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1849]
gi|408271549|gb|EKI91672.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1850]
gi|408274522|gb|EKI94522.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1856]
gi|408282917|gb|EKJ02167.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1862]
gi|408288850|gb|EKJ07647.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1864]
gi|408293359|gb|EKJ11803.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1865]
gi|408304104|gb|EKJ21539.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1868]
gi|408321593|gb|EKJ37611.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1870]
gi|408324123|gb|EKJ40075.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE098]
gi|408334287|gb|EKJ49177.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK523]
gi|408340788|gb|EKJ55268.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 0.1288]
gi|408342744|gb|EKJ57164.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 0.1304]
gi|408457322|gb|EKJ81119.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli AD30]
gi|408545538|gb|EKK22966.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 5.2239]
gi|408576090|gb|EKK51710.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0833]
gi|408578916|gb|EKK54407.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.2524]
gi|408588829|gb|EKK63387.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0869]
gi|408599251|gb|EKK73169.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0416]
gi|412965031|emb|CCK48961.1| putative RNA methylase [Escherichia coli chi7122]
gi|412971614|emb|CCJ46277.1| putative RNA methylase [Escherichia coli]
gi|421936264|gb|EKT93931.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H8
str. CFSAN001632]
gi|421941542|gb|EKT98935.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O26:H11
str. CFSAN001629]
gi|421946486|gb|EKU03611.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O111:H11
str. CFSAN001630]
gi|427201858|gb|EKV72225.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.1042]
gi|427205373|gb|EKV75623.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.1467]
gi|427218307|gb|EKV87322.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.0091]
gi|427221614|gb|EKV90438.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.2281]
gi|427238826|gb|EKW06330.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93.0056]
gi|427239005|gb|EKW06503.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 93.0055]
gi|427243249|gb|EKW10634.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 94.0618]
gi|427256750|gb|EKW22902.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0183]
gi|427258324|gb|EKW24417.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0943]
gi|427260353|gb|EKW26343.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.1288]
gi|427273545|gb|EKW38226.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0428]
gi|427275934|gb|EKW40519.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0427]
gi|427296099|gb|EKW59162.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0107]
gi|427298287|gb|EKW61303.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0003]
gi|427308501|gb|EKW70879.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.1742]
gi|427316437|gb|EKW78384.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0672]
gi|427326900|gb|EKW88305.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0713]
gi|430890953|gb|ELC13501.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE10]
gi|430895778|gb|ELC18031.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE12]
gi|430936241|gb|ELC56524.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE44]
gi|431060073|gb|ELD69411.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE233]
gi|431111896|gb|ELE15786.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE56]
gi|431160222|gb|ELE60737.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE77]
gi|431207460|gb|ELF05716.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE119]
gi|431259427|gb|ELF51792.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE9]
gi|431336500|gb|ELG23610.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE78]
gi|431348481|gb|ELG35338.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE79]
gi|431359858|gb|ELG46483.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE101]
gi|431381995|gb|ELG66344.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE136]
gi|431417258|gb|ELG99721.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE154]
gi|431476907|gb|ELH56694.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE203]
gi|431606777|gb|ELI76149.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE138]
gi|431642593|gb|ELJ10315.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE163]
gi|431653110|gb|ELJ20222.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE166]
gi|431717265|gb|ELJ81365.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE94]
gi|441650898|emb|CCQ03344.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
O5:K4(L):H4 str. ATCC 23502]
gi|443424232|gb|AGC89136.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli APEC O78]
gi|444535408|gb|ELV15494.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0814]
gi|444545648|gb|ELV24495.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0815]
gi|444554939|gb|ELV32443.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0816]
gi|444555014|gb|ELV32507.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0839]
gi|444560071|gb|ELV37253.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0848]
gi|444569494|gb|ELV46082.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1753]
gi|444573273|gb|ELV49657.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1775]
gi|444576565|gb|ELV52728.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1793]
gi|444589888|gb|ELV65209.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ATCC
700728]
gi|444603685|gb|ELV78382.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA13]
gi|444612921|gb|ELV87201.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA2]
gi|444620342|gb|ELV94350.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA47]
gi|444620790|gb|ELV94784.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA48]
gi|444635704|gb|ELW09121.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 7.1982]
gi|444642502|gb|ELW15690.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1762]
gi|444652039|gb|ELW24818.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA35]
gi|444657307|gb|ELW29793.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 3.4880]
gi|444660432|gb|ELW32802.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 95.0083]
gi|444667248|gb|ELW39287.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0670]
gi|449313909|gb|EMD04095.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O08]
gi|449314618|gb|EMD04781.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli S17]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|300939291|ref|ZP_07153965.1| RNA methyltransferase, TrmH family [Escherichia coli MS 21-1]
gi|300455798|gb|EFK19291.1| RNA methyltransferase, TrmH family [Escherichia coli MS 21-1]
Length = 218
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 71 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|430877571|ref|ZP_19483940.1| RNA methyltransferase [Enterococcus faecium E1575]
gi|430557324|gb|ELA96790.1| RNA methyltransferase [Enterococcus faecium E1575]
Length = 254
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L+D +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLADVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGHGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|373498981|ref|ZP_09589476.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
12_1B]
gi|371959679|gb|EHO77356.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
12_1B]
Length = 151
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNA-----FGSHGSTSHVNFRHFHSL 60
+++ I N G L RSA FGV +I+ R S G+ HV+ ++
Sbjct: 7 LILDEIQDPRNFGALIRSAEVFGVKGIIIPERNAVRVNETVVKTSTGAIEHVDIVKVTNI 66
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S+A + LK D + G E + + D ++ + TA +LG+EG G+ K E CD + I
Sbjct: 67 SEALLKLKKLDYWVYGAE-GEGSKDYSKEKYPSRTALVLGSEGNGIRKKVKENCDVLIKI 125
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA I+L
Sbjct: 126 PMY-GKINSLNVSVAGGIILSEI 147
>gi|415838602|ref|ZP_11520571.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli RN587/1]
gi|417281817|ref|ZP_12069117.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3003]
gi|323189442|gb|EFZ74723.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli RN587/1]
gi|386246146|gb|EII87876.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3003]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|331649465|ref|ZP_08350551.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli M605]
gi|417664239|ref|ZP_12313819.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Escherichia coli AA86]
gi|330909712|gb|EGH38226.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Escherichia coli AA86]
gi|331041963|gb|EGI14107.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli M605]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|110643892|ref|YP_671622.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 536]
gi|170681825|ref|YP_001745951.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SMS-3-5]
gi|191170337|ref|ZP_03031890.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli F11]
gi|218707285|ref|YP_002414804.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli UMN026]
gi|293407274|ref|ZP_06651198.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FVEC1412]
gi|298383020|ref|ZP_06992615.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli
FVEC1302]
gi|331665276|ref|ZP_08366177.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA143]
gi|331685313|ref|ZP_08385899.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H299]
gi|387609413|ref|YP_006098269.1| tRNA (guanosine-2'-O)-methyltransferase [Escherichia coli 042]
gi|417142293|ref|ZP_11984868.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
97.0259]
gi|417310197|ref|ZP_12097017.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PCN033]
gi|419917521|ref|ZP_14435766.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KD2]
gi|419934196|ref|ZP_14451339.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 576-1]
gi|422334768|ref|ZP_16415773.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 4_1_47FAA]
gi|422829738|ref|ZP_16877902.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B093]
gi|422977738|ref|ZP_16977482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TA124]
gi|432394255|ref|ZP_19637075.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE21]
gi|432473001|ref|ZP_19715037.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE206]
gi|432478013|ref|ZP_19719999.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE208]
gi|432491433|ref|ZP_19733294.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE213]
gi|432545396|ref|ZP_19782225.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE236]
gi|432550880|ref|ZP_19787633.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE237]
gi|432604484|ref|ZP_19840713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE66]
gi|432618919|ref|ZP_19855016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE75]
gi|432624018|ref|ZP_19860031.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE76]
gi|432715507|ref|ZP_19950531.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE8]
gi|432768024|ref|ZP_20002415.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE50]
gi|432817428|ref|ZP_20051183.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE115]
gi|432855517|ref|ZP_20083353.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE144]
gi|432865974|ref|ZP_20088824.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE146]
gi|432871254|ref|ZP_20091574.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE147]
gi|432915251|ref|ZP_20120578.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE190]
gi|432964368|ref|ZP_20153527.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE202]
gi|433020909|ref|ZP_20208988.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE105]
gi|433065119|ref|ZP_20252022.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE125]
gi|433079848|ref|ZP_20266364.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE131]
gi|433160809|ref|ZP_20345625.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE177]
gi|433205391|ref|ZP_20389136.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE95]
gi|450194503|ref|ZP_21892426.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SEPT362]
gi|110345484|gb|ABG71721.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli 536]
gi|170519543|gb|ACB17721.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SMS-3-5]
gi|190909145|gb|EDV68731.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli F11]
gi|218434382|emb|CAR15308.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli UMN026]
gi|284923713|emb|CBG36810.1| tRNA (guanosine-2'-O)-methyltransferase [Escherichia coli 042]
gi|291426085|gb|EFE99119.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FVEC1412]
gi|298276856|gb|EFI18374.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli
FVEC1302]
gi|331057786|gb|EGI29772.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA143]
gi|331077684|gb|EGI48896.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H299]
gi|338768247|gb|EGP23047.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PCN033]
gi|371593110|gb|EHN81999.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TA124]
gi|371608220|gb|EHN96779.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B093]
gi|373244247|gb|EHP63735.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 4_1_47FAA]
gi|386155317|gb|EIH11672.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
97.0259]
gi|388393985|gb|EIL55325.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KD2]
gi|388409627|gb|EIL69904.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 576-1]
gi|430914404|gb|ELC35500.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE21]
gi|430995448|gb|ELD11741.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE206]
gi|431002042|gb|ELD17608.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE208]
gi|431017919|gb|ELD31372.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE213]
gi|431071245|gb|ELD79388.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE236]
gi|431076368|gb|ELD83864.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE237]
gi|431137123|gb|ELE38971.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE66]
gi|431150434|gb|ELE51484.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE75]
gi|431155803|gb|ELE56545.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE76]
gi|431251763|gb|ELF45769.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE8]
gi|431321914|gb|ELG09510.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE50]
gi|431360568|gb|ELG47171.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE115]
gi|431397529|gb|ELG80983.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE144]
gi|431401903|gb|ELG85235.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE146]
gi|431408254|gb|ELG91445.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE147]
gi|431436319|gb|ELH17926.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE190]
gi|431468517|gb|ELH48451.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE202]
gi|431526829|gb|ELI03565.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE105]
gi|431578009|gb|ELI50625.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE125]
gi|431593895|gb|ELI64186.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE131]
gi|431673505|gb|ELJ39727.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE177]
gi|431716190|gb|ELJ80327.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE95]
gi|449316734|gb|EMD06842.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli SEPT362]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|26250298|ref|NP_756338.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CFT073]
gi|91213169|ref|YP_543155.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli UTI89]
gi|117625923|ref|YP_859246.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli APEC O1]
gi|157156957|ref|YP_001465132.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E24377A]
gi|218560723|ref|YP_002393636.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli S88]
gi|218691934|ref|YP_002400146.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli ED1a]
gi|222158354|ref|YP_002558493.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli LF82]
gi|301028430|ref|ZP_07191676.1| RNA methyltransferase, TrmH family [Escherichia coli MS 196-1]
gi|306816001|ref|ZP_07450139.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NC101]
gi|331644370|ref|ZP_08345499.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H736]
gi|331655284|ref|ZP_08356283.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli M718]
gi|331659987|ref|ZP_08360925.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA206]
gi|386282671|ref|ZP_10060318.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 4_1_40B]
gi|386601685|ref|YP_006103191.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli IHE3034]
gi|386606240|ref|YP_006112540.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli UM146]
gi|386621329|ref|YP_006140909.1| tRNA Guanosine18-2'-O-methyltransferase [Escherichia coli NA114]
gi|386631568|ref|YP_006151288.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. 'clone
D i2']
gi|386636488|ref|YP_006156207.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. 'clone
D i14']
gi|386641277|ref|YP_006108075.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli ABU
83972]
gi|387618951|ref|YP_006121973.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O83:H1 str.
NRG 857C]
gi|387831540|ref|YP_003351477.1| putative RNA methyltransferase [Escherichia coli SE15]
gi|417087540|ref|ZP_11954468.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli cloneA_i1]
gi|417264092|ref|ZP_12051486.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
2.3916]
gi|417273267|ref|ZP_12060614.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
2.4168]
gi|417279248|ref|ZP_12066558.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.2303]
gi|417293608|ref|ZP_12080887.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
B41]
gi|417615243|ref|ZP_12265693.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_EH250]
gi|417620318|ref|ZP_12270721.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli G58-1]
gi|417636623|ref|ZP_12286831.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_S1191]
gi|418305291|ref|ZP_12917085.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli UMNF18]
gi|419144764|ref|ZP_13689491.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6A]
gi|419150391|ref|ZP_13695039.1| spoU rRNA Methylase family protein [Escherichia coli DEC6B]
gi|419156162|ref|ZP_13700717.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6C]
gi|419161506|ref|ZP_13705998.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6D]
gi|419166542|ref|ZP_13710991.1| spoU rRNA Methylase family protein [Escherichia coli DEC6E]
gi|419912105|ref|ZP_14430564.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KD1]
gi|419940012|ref|ZP_14456781.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 75]
gi|419943811|ref|ZP_14460324.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli HM605]
gi|422751505|ref|ZP_16805414.1| SpoU rRNA methylase [Escherichia coli H252]
gi|422756654|ref|ZP_16810476.1| SpoU rRNA methylase [Escherichia coli H263]
gi|422818817|ref|ZP_16867029.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli M919]
gi|423703170|ref|ZP_17677602.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H730]
gi|425117268|ref|ZP_18519045.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 8.0566]
gi|425121998|ref|ZP_18523673.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0569]
gi|425274936|ref|ZP_18666316.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli TW15901]
gi|425285517|ref|ZP_18676530.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli TW00353]
gi|425290859|ref|ZP_18681671.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 3006]
gi|432360114|ref|ZP_19603326.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE4]
gi|432364913|ref|ZP_19608067.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE5]
gi|432383556|ref|ZP_19626481.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE15]
gi|432389464|ref|ZP_19632343.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE16]
gi|432408724|ref|ZP_19651426.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE28]
gi|432413908|ref|ZP_19656561.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE39]
gi|432424060|ref|ZP_19666597.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE178]
gi|432438493|ref|ZP_19680875.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE188]
gi|432443149|ref|ZP_19685483.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE189]
gi|432448292|ref|ZP_19690587.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE191]
gi|432502213|ref|ZP_19743963.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE216]
gi|432516049|ref|ZP_19753264.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE224]
gi|432536062|ref|ZP_19773017.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE234]
gi|432555741|ref|ZP_19792458.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE47]
gi|432560923|ref|ZP_19797576.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE49]
gi|432570917|ref|ZP_19807422.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE53]
gi|432575902|ref|ZP_19812371.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE55]
gi|432594857|ref|ZP_19831168.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE60]
gi|432613663|ref|ZP_19849820.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE72]
gi|432638882|ref|ZP_19874745.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE81]
gi|432648330|ref|ZP_19884115.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE86]
gi|432657895|ref|ZP_19893591.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE93]
gi|432662865|ref|ZP_19898495.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE111]
gi|432687474|ref|ZP_19922762.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE156]
gi|432688924|ref|ZP_19924193.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE161]
gi|432696523|ref|ZP_19931714.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE162]
gi|432701175|ref|ZP_19936319.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE169]
gi|432706392|ref|ZP_19941486.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE171]
gi|432707998|ref|ZP_19943073.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE6]
gi|432725118|ref|ZP_19960031.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE17]
gi|432729726|ref|ZP_19964599.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE18]
gi|432739159|ref|ZP_19973887.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE42]
gi|432743415|ref|ZP_19978129.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE23]
gi|432747635|ref|ZP_19982296.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE43]
gi|432756617|ref|ZP_19991160.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE22]
gi|432846779|ref|ZP_20079382.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE141]
gi|432907361|ref|ZP_20115837.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE194]
gi|432922912|ref|ZP_20125635.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE173]
gi|432929521|ref|ZP_20130571.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE175]
gi|432940467|ref|ZP_20138381.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE183]
gi|432957600|ref|ZP_20149006.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE197]
gi|432973933|ref|ZP_20162776.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE207]
gi|432983102|ref|ZP_20171871.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE211]
gi|432987506|ref|ZP_20176217.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE215]
gi|432992796|ref|ZP_20181434.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE217]
gi|433009862|ref|ZP_20198273.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE229]
gi|433015975|ref|ZP_20204304.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE104]
gi|433025566|ref|ZP_20213534.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE106]
gi|433040668|ref|ZP_20228256.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE113]
gi|433050112|ref|ZP_20237435.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE120]
gi|433060167|ref|ZP_20247198.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE124]
gi|433084587|ref|ZP_20271032.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE133]
gi|433098478|ref|ZP_20284645.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE139]
gi|433103258|ref|ZP_20289327.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE145]
gi|433107916|ref|ZP_20293875.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE148]
gi|433112921|ref|ZP_20298770.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE150]
gi|433117574|ref|ZP_20303353.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE153]
gi|433146297|ref|ZP_20331427.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE168]
gi|433165678|ref|ZP_20350403.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE179]
gi|433170673|ref|ZP_20355289.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE180]
gi|433190466|ref|ZP_20374552.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE88]
gi|433214666|ref|ZP_20398243.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE99]
gi|433321735|ref|ZP_20399293.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli J96]
gi|442595497|ref|ZP_21013343.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|442605674|ref|ZP_21020490.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
Nissle 1917]
gi|26110728|gb|AAN82912.1|AE016769_27 tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli CFT073]
gi|91074743|gb|ABE09624.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli UTI89]
gi|115515047|gb|ABJ03122.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli APEC O1]
gi|157078987|gb|ABV18695.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E24377A]
gi|218367492|emb|CAR05274.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli S88]
gi|218429498|emb|CAR10462.2| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli ED1a]
gi|222035359|emb|CAP78104.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli LF82]
gi|281180697|dbj|BAI57027.1| putative RNA methyltransferase [Escherichia coli SE15]
gi|294493140|gb|ADE91896.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli IHE3034]
gi|299878541|gb|EFI86752.1| RNA methyltransferase, TrmH family [Escherichia coli MS 196-1]
gi|305850397|gb|EFM50854.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NC101]
gi|307555769|gb|ADN48544.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia coli ABU
83972]
gi|307628724|gb|ADN73028.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli UM146]
gi|312948212|gb|ADR29039.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O83:H1 str.
NRG 857C]
gi|323949890|gb|EGB45774.1| SpoU rRNA methylase [Escherichia coli H252]
gi|323954946|gb|EGB50725.1| SpoU rRNA methylase [Escherichia coli H263]
gi|331036664|gb|EGI08890.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli H736]
gi|331047299|gb|EGI19377.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli M718]
gi|331053202|gb|EGI25235.1| tRNA guanosine-2'-O-methyltransferase (tRNA
[Gm18]methyltransferase) [Escherichia coli TA206]
gi|333971830|gb|AEG38635.1| tRNA Guanosine18-2'-O-methyltransferase [Escherichia coli NA114]
gi|339417389|gb|AEJ59061.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli UMNF18]
gi|345358521|gb|EGW90707.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_EH250]
gi|345370723|gb|EGX02699.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli G58-1]
gi|345385128|gb|EGX14976.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_S1191]
gi|355349640|gb|EHF98843.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli cloneA_i1]
gi|355422467|gb|AER86664.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. 'clone
D i2']
gi|355427387|gb|AER91583.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli str. 'clone
D i14']
gi|377989194|gb|EHV52362.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6A]
gi|377989682|gb|EHV52848.1| spoU rRNA Methylase family protein [Escherichia coli DEC6B]
gi|377993231|gb|EHV56369.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6C]
gi|378004205|gb|EHV67233.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC6D]
gi|378006766|gb|EHV69739.1| spoU rRNA Methylase family protein [Escherichia coli DEC6E]
gi|385537620|gb|EIF84490.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli M919]
gi|385708727|gb|EIG45732.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H730]
gi|386120294|gb|EIG68924.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 4_1_40B]
gi|386221801|gb|EII44230.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
2.3916]
gi|386234444|gb|EII66422.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
2.4168]
gi|386238025|gb|EII74965.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
3.2303]
gi|386251796|gb|EIJ01488.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
B41]
gi|388392204|gb|EIL53631.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KD1]
gi|388404774|gb|EIL65221.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 75]
gi|388420008|gb|EIL79713.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli HM605]
gi|408189852|gb|EKI15546.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli TW15901]
gi|408198186|gb|EKI23429.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli TW00353]
gi|408209280|gb|EKI33881.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 3006]
gi|408563648|gb|EKK39779.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli 8.0566]
gi|408564743|gb|EKK40844.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0569]
gi|430873248|gb|ELB96823.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE4]
gi|430883203|gb|ELC06207.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE5]
gi|430903455|gb|ELC25192.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE16]
gi|430903941|gb|ELC25677.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE15]
gi|430926098|gb|ELC46686.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE28]
gi|430932934|gb|ELC53352.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE39]
gi|430941688|gb|ELC61830.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE178]
gi|430960515|gb|ELC78670.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE188]
gi|430963352|gb|ELC80939.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE189]
gi|430970677|gb|ELC87722.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE191]
gi|431025881|gb|ELD38967.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE216]
gi|431038744|gb|ELD49640.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE224]
gi|431057435|gb|ELD66878.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE234]
gi|431080864|gb|ELD87650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE47]
gi|431088418|gb|ELD94296.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE49]
gi|431097083|gb|ELE02532.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE53]
gi|431104675|gb|ELE09048.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE55]
gi|431125758|gb|ELE28155.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE60]
gi|431146685|gb|ELE48121.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE72]
gi|431168358|gb|ELE68604.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE81]
gi|431178303|gb|ELE78216.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE86]
gi|431188006|gb|ELE87505.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE93]
gi|431196800|gb|ELE95705.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE111]
gi|431219125|gb|ELF16543.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE156]
gi|431231167|gb|ELF26935.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE162]
gi|431235646|gb|ELF30895.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE161]
gi|431240286|gb|ELF34748.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE169]
gi|431240582|gb|ELF35033.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE171]
gi|431254952|gb|ELF48213.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE6]
gi|431262337|gb|ELF54327.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE17]
gi|431270867|gb|ELF62010.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE18]
gi|431279259|gb|ELF70227.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE42]
gi|431281572|gb|ELF72475.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE23]
gi|431289535|gb|ELF80276.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE43]
gi|431299505|gb|ELF89076.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE22]
gi|431392312|gb|ELG75911.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE141]
gi|431428327|gb|ELH10269.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE194]
gi|431434832|gb|ELH16446.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE173]
gi|431440929|gb|ELH22257.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE175]
gi|431460361|gb|ELH40650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE183]
gi|431463478|gb|ELH43668.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE197]
gi|431479280|gb|ELH59023.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE207]
gi|431488860|gb|ELH68490.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE211]
gi|431490551|gb|ELH70161.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE217]
gi|431494264|gb|ELH73853.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE215]
gi|431521244|gb|ELH98492.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE229]
gi|431526543|gb|ELI03291.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE104]
gi|431530951|gb|ELI07626.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE106]
gi|431548505|gb|ELI22786.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE113]
gi|431561959|gb|ELI35295.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE120]
gi|431565772|gb|ELI38847.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE124]
gi|431597991|gb|ELI67892.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE133]
gi|431612478|gb|ELI81725.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE139]
gi|431616021|gb|ELI85089.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE145]
gi|431623814|gb|ELI92440.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE148]
gi|431624817|gb|ELI93413.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE150]
gi|431630534|gb|ELI98863.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE153]
gi|431657482|gb|ELJ24446.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE168]
gi|431683574|gb|ELJ49203.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE179]
gi|431683998|gb|ELJ49619.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE180]
gi|431702106|gb|ELJ66907.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE88]
gi|431731824|gb|ELJ95286.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE99]
gi|432349538|gb|ELL43965.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli J96]
gi|441604346|emb|CCP98477.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
O10:K5(L):H4 str. ATCC 23506]
gi|441713356|emb|CCQ06467.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia coli
Nissle 1917]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|194431220|ref|ZP_03063513.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae 1012]
gi|194420675|gb|EDX36751.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae 1012]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|429120510|ref|ZP_19181185.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
680]
gi|426325024|emb|CCK11922.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
680]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRNISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D AVD + + + T LLG E G++ + + D + IP
Sbjct: 82 AVSHLKARGMQILATHLSDKAVDFREIDYTRPTCILLGQEKTGITEEALSLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|218702420|ref|YP_002410049.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli IAI39]
gi|386626472|ref|YP_006146200.1| tRNA mG18-2'-O-methyltransferase, SAM-dependen [Escherichia coli
O7:K1 str. CE10]
gi|218372406|emb|CAR20280.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli IAI39]
gi|349740208|gb|AEQ14914.1| tRNA mG18-2'-O-methyltransferase, SAM-dependen [Escherichia coli
O7:K1 str. CE10]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|283787717|ref|YP_003367582.1| tRNA (guanosine-2'-O)-methyltransferase [Citrobacter rodentium
ICC168]
gi|282951171|emb|CBG90863.1| tRNA (guanosine-2'-O)-methyltransferase [Citrobacter rodentium
ICC168]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++DNAVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVSHLKGRGMQVLATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|227883841|ref|ZP_04001646.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 83972]
gi|300919781|ref|ZP_07136256.1| RNA methyltransferase, TrmH family [Escherichia coli MS 115-1]
gi|300950017|ref|ZP_07163967.1| RNA methyltransferase, TrmH family [Escherichia coli MS 116-1]
gi|300955360|ref|ZP_07167739.1| RNA methyltransferase, TrmH family [Escherichia coli MS 175-1]
gi|300984896|ref|ZP_07177184.1| RNA methyltransferase, TrmH family [Escherichia coli MS 45-1]
gi|301047441|ref|ZP_07194520.1| RNA methyltransferase, TrmH family [Escherichia coli MS 185-1]
gi|301644318|ref|ZP_07244320.1| RNA methyltransferase, TrmH family [Escherichia coli MS 146-1]
gi|422360751|ref|ZP_16441380.1| RNA methyltransferase, TrmH family [Escherichia coli MS 110-3]
gi|422364335|ref|ZP_16444853.1| RNA methyltransferase, TrmH family [Escherichia coli MS 153-1]
gi|422371261|ref|ZP_16451642.1| RNA methyltransferase, TrmH family [Escherichia coli MS 16-3]
gi|422380676|ref|ZP_16460850.1| RNA methyltransferase, TrmH family [Escherichia coli MS 57-2]
gi|432399600|ref|ZP_19642373.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE25]
gi|432433874|ref|ZP_19676297.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE187]
gi|432458785|ref|ZP_19700959.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE201]
gi|432497780|ref|ZP_19739571.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE214]
gi|432506535|ref|ZP_19748253.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE220]
gi|432526012|ref|ZP_19763127.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE230]
gi|432599917|ref|ZP_19836186.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE62]
gi|432605082|ref|ZP_19841291.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE67]
gi|432653256|ref|ZP_19889000.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE87]
gi|432734415|ref|ZP_19969237.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE45]
gi|432761500|ref|ZP_19995988.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE46]
gi|432785629|ref|ZP_20019805.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE63]
gi|432803854|ref|ZP_20037805.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE84]
gi|432891205|ref|ZP_20103963.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE165]
gi|432901218|ref|ZP_20111330.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE192]
gi|432975867|ref|ZP_20164699.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE209]
gi|432997426|ref|ZP_20186006.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE218]
gi|433002022|ref|ZP_20190539.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE223]
gi|433007246|ref|ZP_20195668.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE227]
gi|433030603|ref|ZP_20218449.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE109]
gi|433089370|ref|ZP_20275728.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE137]
gi|433127276|ref|ZP_20312817.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE160]
gi|433141350|ref|ZP_20326587.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE167]
gi|433151302|ref|ZP_20336298.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE174]
gi|433155839|ref|ZP_20340766.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE176]
gi|433209799|ref|ZP_20393462.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE97]
gi|227839119|gb|EEJ49585.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 83972]
gi|300300649|gb|EFJ57034.1| RNA methyltransferase, TrmH family [Escherichia coli MS 185-1]
gi|300317732|gb|EFJ67516.1| RNA methyltransferase, TrmH family [Escherichia coli MS 175-1]
gi|300408325|gb|EFJ91863.1| RNA methyltransferase, TrmH family [Escherichia coli MS 45-1]
gi|300413134|gb|EFJ96444.1| RNA methyltransferase, TrmH family [Escherichia coli MS 115-1]
gi|300450631|gb|EFK14251.1| RNA methyltransferase, TrmH family [Escherichia coli MS 116-1]
gi|301077356|gb|EFK92162.1| RNA methyltransferase, TrmH family [Escherichia coli MS 146-1]
gi|315285421|gb|EFU44866.1| RNA methyltransferase, TrmH family [Escherichia coli MS 110-3]
gi|315292920|gb|EFU52272.1| RNA methyltransferase, TrmH family [Escherichia coli MS 153-1]
gi|315296994|gb|EFU56274.1| RNA methyltransferase, TrmH family [Escherichia coli MS 16-3]
gi|324008107|gb|EGB77326.1| RNA methyltransferase, TrmH family [Escherichia coli MS 57-2]
gi|430912762|gb|ELC33934.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE25]
gi|430950144|gb|ELC69532.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE187]
gi|430979310|gb|ELC96095.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE201]
gi|431020788|gb|ELD34123.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE214]
gi|431035355|gb|ELD46745.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE220]
gi|431048306|gb|ELD58289.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE230]
gi|431127792|gb|ELE30086.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE62]
gi|431144104|gb|ELE45811.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE67]
gi|431187138|gb|ELE86652.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE87]
gi|431271028|gb|ELF62170.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE45]
gi|431305436|gb|ELF93759.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE46]
gi|431325951|gb|ELG13314.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE63]
gi|431345602|gb|ELG32518.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE84]
gi|431422259|gb|ELH04452.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE192]
gi|431430320|gb|ELH12152.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE165]
gi|431485533|gb|ELH65192.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE209]
gi|431502118|gb|ELH81010.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE218]
gi|431504294|gb|ELH82920.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE223]
gi|431509853|gb|ELH88101.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE227]
gi|431540235|gb|ELI15862.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE109]
gi|431600658|gb|ELI70325.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE137]
gi|431640152|gb|ELJ07913.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE160]
gi|431655773|gb|ELJ22803.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE167]
gi|431667093|gb|ELJ33685.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE174]
gi|431670270|gb|ELJ36624.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE176]
gi|431728079|gb|ELJ91800.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE97]
Length = 218
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 71 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|415831320|ref|ZP_11517037.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli OK1357]
gi|323182442|gb|EFZ67846.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli OK1357]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|293417112|ref|ZP_06659739.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B185]
gi|432451908|ref|ZP_19694162.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE193]
gi|433035567|ref|ZP_20223256.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE112]
gi|291431143|gb|EFF04136.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli B185]
gi|430977058|gb|ELC93909.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE193]
gi|431546530|gb|ELI20926.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE112]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVTHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|260846564|ref|YP_003224342.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O103:H2
str. 12009]
gi|257761711|dbj|BAI33208.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O103:H2
str. 12009]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|432682447|ref|ZP_19917803.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE143]
gi|431217421|gb|ELF15000.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE143]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|313206520|ref|YP_004045697.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485822|ref|YP_005394734.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|386321489|ref|YP_006017651.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|416109745|ref|ZP_11591625.1| RNA methylase, SpoU family protein [Riemerella anatipestifer RA-YM]
gi|442314279|ref|YP_007355582.1| hypothetical protein G148_0584 [Riemerella anatipestifer RA-CH-2]
gi|312445836|gb|ADQ82191.1| tRNA/rRNA methyltransferase (SpoU) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|315023539|gb|EFT36543.1| RNA methylase, SpoU family protein [Riemerella anatipestifer RA-YM]
gi|325336032|gb|ADZ12306.1| rRNA methylase [Riemerella anatipestifer RA-GD]
gi|380460507|gb|AFD56191.1| tRNA/rRNA methyltransferase (spou) [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|441483202|gb|AGC39888.1| hypothetical protein G148_0584 [Riemerella anatipestifer RA-CH-2]
Length = 176
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
VV+ NI HNVG L R+A AF + +++L G R+ + + G+T V++ +
Sbjct: 28 VVLDNIRSMHNVGALFRTADAFLIEKIVLCGITPQPPHREIHK-AALGATESVDWVYQKD 86
Query: 60 LSDARVFLKSKDCDICGVEITDNAV---DVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+S+A LK++ +I GVE T +++ D +P +K A +LGNE GLS + + D
Sbjct: 87 ISEAIKELKTQGYNIIGVEQTTDSISLSDFEINPNQKY-ALVLGNEVEGLSDEALPLYDN 145
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
F+ IPQ G SLNV+V IV+ F
Sbjct: 146 FIEIPQL-GTKHSLNVSVCGGIVIWSF 171
>gi|300898586|ref|ZP_07116916.1| RNA methyltransferase, TrmH family [Escherichia coli MS 198-1]
gi|300983468|ref|ZP_07176615.1| RNA methyltransferase, TrmH family [Escherichia coli MS 200-1]
gi|417588789|ref|ZP_12239551.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_C165-02]
gi|422376036|ref|ZP_16456294.1| RNA methyltransferase, TrmH family [Escherichia coli MS 60-1]
gi|432355678|ref|ZP_19598943.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE2]
gi|432404051|ref|ZP_19646795.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE26]
gi|432428319|ref|ZP_19670799.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE181]
gi|432463018|ref|ZP_19705150.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE204]
gi|432519871|ref|ZP_19757050.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE228]
gi|432540034|ref|ZP_19776925.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE235]
gi|432633552|ref|ZP_19869470.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE80]
gi|432643249|ref|ZP_19879071.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE83]
gi|432668242|ref|ZP_19903813.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE116]
gi|432772428|ref|ZP_20006740.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE54]
gi|432841462|ref|ZP_20074919.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE140]
gi|432889134|ref|ZP_20102723.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE158]
gi|433053110|ref|ZP_20240305.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE122]
gi|433070013|ref|ZP_20256779.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE128]
gi|433180528|ref|ZP_20364903.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE82]
gi|300306932|gb|EFJ61452.1| RNA methyltransferase, TrmH family [Escherichia coli MS 200-1]
gi|300357749|gb|EFJ73619.1| RNA methyltransferase, TrmH family [Escherichia coli MS 198-1]
gi|324012714|gb|EGB81933.1| RNA methyltransferase, TrmH family [Escherichia coli MS 60-1]
gi|345331788|gb|EGW64247.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_C165-02]
gi|430872517|gb|ELB96121.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE2]
gi|430923464|gb|ELC44201.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE26]
gi|430950548|gb|ELC69777.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE181]
gi|430985598|gb|ELD02195.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE204]
gi|431048123|gb|ELD58108.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE228]
gi|431066861|gb|ELD75482.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE235]
gi|431167239|gb|ELE67520.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE80]
gi|431177420|gb|ELE77351.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE83]
gi|431197584|gb|ELE96431.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE116]
gi|431323517|gb|ELG11010.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE54]
gi|431385925|gb|ELG69890.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE140]
gi|431413461|gb|ELG96227.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE158]
gi|431571506|gb|ELI44376.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE122]
gi|431578855|gb|ELI51444.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE128]
gi|431697870|gb|ELJ62957.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE82]
Length = 218
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 71 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|415800551|ref|ZP_11499293.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli E128010]
gi|323160738|gb|EFZ46674.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli E128010]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|300822421|ref|ZP_07102561.1| RNA methyltransferase, TrmH family [Escherichia coli MS 119-7]
gi|300907694|ref|ZP_07125322.1| RNA methyltransferase, TrmH family [Escherichia coli MS 84-1]
gi|300923462|ref|ZP_07139502.1| RNA methyltransferase, TrmH family [Escherichia coli MS 182-1]
gi|300927918|ref|ZP_07143477.1| RNA methyltransferase, TrmH family [Escherichia coli MS 187-1]
gi|301303886|ref|ZP_07210005.1| RNA methyltransferase, TrmH family [Escherichia coli MS 124-1]
gi|301325334|ref|ZP_07218841.1| RNA methyltransferase, TrmH family [Escherichia coli MS 78-1]
gi|309797607|ref|ZP_07691995.1| RNA methyltransferase, TrmH family [Escherichia coli MS 145-7]
gi|415865585|ref|ZP_11538398.1| RNA methyltransferase, TrmH family [Escherichia coli MS 85-1]
gi|420393788|ref|ZP_14893032.1| spoU rRNA Methylase family protein [Escherichia coli EPEC C342-62]
gi|421820386|ref|ZP_16255871.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0821]
gi|422352269|ref|ZP_16433060.1| RNA methyltransferase, TrmH family [Escherichia coli MS 117-3]
gi|424118188|ref|ZP_17852016.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA3]
gi|424528512|ref|ZP_17972219.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4421]
gi|424577888|ref|ZP_18017925.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1845]
gi|424583726|ref|ZP_18023361.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1863]
gi|425100370|ref|ZP_18503092.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 3.4870]
gi|425112478|ref|ZP_18514389.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 6.0172]
gi|425158453|ref|ZP_18557707.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA34]
gi|425164772|ref|ZP_18563650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA506]
gi|425170520|ref|ZP_18568983.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA507]
gi|425176569|ref|ZP_18574679.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA504]
gi|425182626|ref|ZP_18580311.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1999]
gi|425202131|ref|ZP_18598329.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE037]
gi|425208511|ref|ZP_18604298.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK2001]
gi|425257333|ref|ZP_18649830.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CB7326]
gi|425344666|ref|ZP_18731546.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1848]
gi|425388181|ref|ZP_18771729.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1866]
gi|428973837|ref|ZP_19044149.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.0039]
gi|429035079|ref|ZP_19100591.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0939]
gi|429041179|ref|ZP_19106260.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0932]
gi|429063437|ref|ZP_19127409.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0007]
gi|429075433|ref|ZP_19138678.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0678]
gi|432487423|ref|ZP_19729329.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE212]
gi|433175557|ref|ZP_20360061.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE232]
gi|444927331|ref|ZP_21246594.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli
09BKT078844]
gi|444977069|ref|ZP_21294154.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1805]
gi|444987836|ref|ZP_21304605.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA11]
gi|444993141|ref|ZP_21309775.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA19]
gi|300400630|gb|EFJ84168.1| RNA methyltransferase, TrmH family [Escherichia coli MS 84-1]
gi|300420289|gb|EFK03600.1| RNA methyltransferase, TrmH family [Escherichia coli MS 182-1]
gi|300464010|gb|EFK27503.1| RNA methyltransferase, TrmH family [Escherichia coli MS 187-1]
gi|300525068|gb|EFK46137.1| RNA methyltransferase, TrmH family [Escherichia coli MS 119-7]
gi|300840849|gb|EFK68609.1| RNA methyltransferase, TrmH family [Escherichia coli MS 124-1]
gi|300847861|gb|EFK75621.1| RNA methyltransferase, TrmH family [Escherichia coli MS 78-1]
gi|308118794|gb|EFO56056.1| RNA methyltransferase, TrmH family [Escherichia coli MS 145-7]
gi|315254039|gb|EFU34007.1| RNA methyltransferase, TrmH family [Escherichia coli MS 85-1]
gi|324019690|gb|EGB88909.1| RNA methyltransferase, TrmH family [Escherichia coli MS 117-3]
gi|390674633|gb|EIN50809.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA3]
gi|390848152|gb|EIP11636.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4421]
gi|390916208|gb|EIP74686.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1863]
gi|390916740|gb|EIP75191.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1845]
gi|391309867|gb|EIQ67530.1| spoU rRNA Methylase family protein [Escherichia coli EPEC C342-62]
gi|408066527|gb|EKH00981.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA34]
gi|408076749|gb|EKH10970.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA506]
gi|408080573|gb|EKH14638.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA507]
gi|408088791|gb|EKH22138.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FDA504]
gi|408094873|gb|EKH27873.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK1999]
gi|408112762|gb|EKH44379.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli NE037]
gi|408119100|gb|EKH50194.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli FRIK2001]
gi|408170731|gb|EKH97889.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli CB7326]
gi|408256717|gb|EKI78084.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1848]
gi|408304914|gb|EKJ22323.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1866]
gi|408546084|gb|EKK23503.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 3.4870]
gi|408546884|gb|EKK24288.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 6.0172]
gi|408609561|gb|EKK82939.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 10.0821]
gi|427225033|gb|EKV93698.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 90.0039]
gi|427280961|gb|EKW45301.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0939]
gi|427289358|gb|EKW52921.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0932]
gi|427311629|gb|EKW73819.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0007]
gi|427325401|gb|EKW86843.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.0678]
gi|431013255|gb|ELD26988.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE212]
gi|431688239|gb|ELJ53778.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE232]
gi|444536963|gb|ELV16937.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli
09BKT078844]
gi|444589501|gb|ELV64834.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1805]
gi|444589795|gb|ELV65118.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA11]
gi|444604075|gb|ELV78758.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA19]
Length = 218
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 71 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|238789531|ref|ZP_04633315.1| tRNA guanosine-2'-O-methyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238722284|gb|EEQ13940.1| tRNA guanosine-2'-O-methyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 230
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + + S GS S V + ++D
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLSSAAGSNSWVQVKTHSHIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++DNAVD + + + T L+G E G+S + + D + IP
Sbjct: 82 AITHLKSQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGISQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLHHFGVW---AGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
G SLNV+VA++++L+ AG +R + V+ E +Q R F P
Sbjct: 142 I-GMVQSLNVSVASALILYEAQRQRQNAGMYQRAQS----VLPEE--QQQRLLFEGGYP- 193
Query: 180 SIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ + ++R+ + D G ++ + A+ + E
Sbjct: 194 --VLAQVAKRKGLPQPYIDDQGQVIADAQWWSAMQSTE 229
>gi|187732340|ref|YP_001882364.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii CDC 3083-94]
gi|187429332|gb|ACD08606.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii CDC 3083-94]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|417631092|ref|ZP_12281326.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_MHI813]
gi|433045199|ref|ZP_20232673.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE117]
gi|345370371|gb|EGX02349.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_MHI813]
gi|431552596|gb|ELI26549.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE117]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|301018980|ref|ZP_07183203.1| RNA methyltransferase, TrmH family [Escherichia coli MS 69-1]
gi|300399474|gb|EFJ83012.1| RNA methyltransferase, TrmH family [Escherichia coli MS 69-1]
Length = 218
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 71 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|422836173|ref|ZP_16884222.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E101]
gi|432950328|ref|ZP_20144617.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE196]
gi|371609734|gb|EHN98268.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E101]
gi|431452634|gb|ELH33046.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE196]
Length = 218
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 71 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITEEALALADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|365102441|ref|ZP_09332742.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii
4_7_47CFAA]
gi|363646169|gb|EHL85417.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii
4_7_47CFAA]
Length = 229
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + G R S GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMLSSAAGSNSWVQVKTHPTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ + ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTHLKSRGMQVLATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|238062522|ref|ZP_04607231.1| tRNA/rRNA methyltransferase [Micromonospora sp. ATCC 39149]
gi|237884333|gb|EEP73161.1| tRNA/rRNA methyltransferase [Micromonospora sp. ATCC 39149]
Length = 210
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++ +
Sbjct: 63 HVAIENWQHDLNIGTVVRNANAFLAAEVHIVGRRRWNRRGAMVTDRYQHVRHHETIEEFA 122
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ + G++ + + + A L G EG GLS CD I QY
Sbjct: 123 AWAAGRNLPVVGIDNLPGSRPLETTSLPRRCALLFGQEGPGLSDAARAACDQLFSIAQY- 181
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ I +H +
Sbjct: 182 GSTRSINAGVASGIAMHAW 200
>gi|383753784|ref|YP_005432687.1| putative RNA methyltransferase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365836|dbj|BAL82664.1| putative RNA methyltransferase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 267
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 76/144 (52%), Gaps = 9/144 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFH 58
YVV+ + N GT+ R+A A G +I++ + +AF + GS HV
Sbjct: 120 YVVMDGVQDPGNAGTIIRTADAVGADGVIML-KGSVDAFADKVVRSTMGSIFHVPVYAGI 178
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
S ++ + F++++D + + +NA Q F + TA +LGNEG G+SA+ +
Sbjct: 179 SAAELQAFVQAQDLQLLATALDENAKPHFQQDFTRGTAVVLGNEGNGVSAEVLAMAQ-KT 237
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
YIP YG SLNV ++A+IVL+
Sbjct: 238 YIPMYGQAE-SLNVAMSAAIVLYE 260
>gi|193070365|ref|ZP_03051307.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E110019]
gi|293413085|ref|ZP_06655753.1| conserved hypothetical protein [Escherichia coli B354]
gi|432676775|ref|ZP_19912219.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE142]
gi|192956304|gb|EDV86765.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli E110019]
gi|291468732|gb|EFF11225.1| conserved hypothetical protein [Escherichia coli B354]
gi|431210683|gb|ELF08737.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE142]
Length = 229
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITEEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|441506911|ref|ZP_20988839.1| putative RNA methyltransferase [Gordonia aichiensis NBRC 108223]
gi|441448976|dbj|GAC46800.1| putative RNA methyltransferase [Gordonia aichiensis NBRC 108223]
Length = 225
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF S + +VGRR +N G+ + + + H S+S+
Sbjct: 77 HVAIENFAHDANIGTVVRTANAFAASAVHIVGRRRWNRRGAMVTDRYQHLLHHDSVSELM 136
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T +V + ++ L G EG G+S D V I Q+
Sbjct: 137 AWARGEGLAVVAVDNTPGSVPLETADLPRACILLFGQEGPGVSDDAQAQADLTVSIAQF- 195
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 196 GSTRSINAGVAAGIAMHAW 214
>gi|420368520|ref|ZP_14869268.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 1235-66]
gi|391322162|gb|EIQ78862.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri 1235-66]
Length = 229
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEEVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASSAAGSNSWVQVKTHRTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVTHLKNRGMQVLATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|257884108|ref|ZP_05663761.1| rRNA methyltransferase [Enterococcus faecium 1,231,501]
gi|431230091|ref|ZP_19502294.1| RNA methyltransferase [Enterococcus faecium E1622]
gi|431764406|ref|ZP_19552947.1| RNA methyltransferase [Enterococcus faecium E4215]
gi|257819946|gb|EEV47094.1| rRNA methyltransferase [Enterococcus faecium 1,231,501]
gi|430574077|gb|ELB12855.1| RNA methyltransferase [Enterococcus faecium E1622]
gi|430631057|gb|ELB67388.1| RNA methyltransferase [Enterococcus faecium E4215]
Length = 254
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|82779142|ref|YP_405491.1| tRNA guanosine-2'-O-methyltransferase [Shigella dysenteriae Sd197]
gi|309784368|ref|ZP_07679007.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella dysenteriae
1617]
gi|81243290|gb|ABB64000.1| putative RNA methylase [Shigella dysenteriae Sd197]
gi|308927875|gb|EFP73343.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella dysenteriae
1617]
Length = 229
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|317495868|ref|ZP_07954231.1| RNA methyltransferase [Gemella morbillorum M424]
gi|316914045|gb|EFV35528.1| RNA methyltransferase [Gemella morbillorum M424]
Length = 270
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFH 58
+ +++ +I HN+G + RSA A GV +I+ RR S G+ H+
Sbjct: 122 TLLLLDHIEDPHNLGAIIRSAEASGVKGVIIPKRRAAVVSQTAVKASAGAIEHMPVIRVS 181
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
SL DA LK K I G +T+ + D T+ ++GNEG G+S CDF
Sbjct: 182 SLIDAIKKLKEKGFWIAGTTLTERSEDYTKIAKDVPLVIVVGNEGEGMSKVVTNECDFLY 241
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
++P G SLNV+VAA IV++
Sbjct: 242 HLPML-GKVQSLNVSVAAGIVMYE 264
>gi|170766883|ref|ZP_02901336.1| tRNA guanosine-2'-O-methyltransferase [Escherichia albertii
TW07627]
gi|170124321|gb|EDS93252.1| tRNA guanosine-2'-O-methyltransferase [Escherichia albertii
TW07627]
Length = 229
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASTAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + T L+G E G++ + E+ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDNAVDFREIDYTCPTCILMGQEKTGITKEALELADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|293553832|ref|ZP_06674447.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1039]
gi|406591097|ref|ZP_11065404.1| RNA methyltransferase [Enterococcus sp. GMD1E]
gi|410936861|ref|ZP_11368724.1| RNA methyltransferase [Enterococcus sp. GMD5E]
gi|415893540|ref|ZP_11550185.1| Uncharacterized tRNA/rRNA methyltransferase ysgA [Enterococcus
faecium E4453]
gi|431746482|ref|ZP_19535308.1| RNA methyltransferase [Enterococcus faecium E2134]
gi|291602038|gb|EFF32275.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1039]
gi|364092686|gb|EHM35033.1| Uncharacterized tRNA/rRNA methyltransferase ysgA [Enterococcus
faecium E4453]
gi|404468263|gb|EKA13266.1| RNA methyltransferase [Enterococcus sp. GMD1E]
gi|410734891|gb|EKQ76809.1| RNA methyltransferase [Enterococcus sp. GMD5E]
gi|430608716|gb|ELB45955.1| RNA methyltransferase [Enterococcus faecium E2134]
Length = 254
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|430825755|ref|ZP_19443956.1| RNA methyltransferase [Enterococcus faecium E0164]
gi|430445819|gb|ELA55536.1| RNA methyltransferase [Enterococcus faecium E0164]
Length = 254
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|294623039|ref|ZP_06701928.1| RNA methyltransferase, TrmH family [Enterococcus faecium U0317]
gi|425032784|ref|ZP_18437795.1| RNA methyltransferase, TrmH family [Enterococcus faecium 515]
gi|431003757|ref|ZP_19488855.1| RNA methyltransferase [Enterococcus faecium E1578]
gi|431775501|ref|ZP_19563773.1| RNA methyltransferase [Enterococcus faecium E2560]
gi|291597595|gb|EFF28757.1| RNA methyltransferase, TrmH family [Enterococcus faecium U0317]
gi|403011778|gb|EJY25061.1| RNA methyltransferase, TrmH family [Enterococcus faecium 515]
gi|430561846|gb|ELB01100.1| RNA methyltransferase [Enterococcus faecium E1578]
gi|430642770|gb|ELB78536.1| RNA methyltransferase [Enterococcus faecium E2560]
Length = 254
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|294616353|ref|ZP_06696146.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1636]
gi|424898819|ref|ZP_18322373.1| RNA methyltransferase, TrmH family [Enterococcus faecium R497]
gi|430847722|ref|ZP_19465556.1| RNA methyltransferase [Enterococcus faecium E1133]
gi|430849350|ref|ZP_19467131.1| RNA methyltransferase [Enterococcus faecium E1185]
gi|431077000|ref|ZP_19495036.1| RNA methyltransferase [Enterococcus faecium E1604]
gi|431414381|ref|ZP_19512200.1| RNA methyltransferase [Enterococcus faecium E1630]
gi|431750242|ref|ZP_19538967.1| RNA methyltransferase [Enterococcus faecium E2297]
gi|431759593|ref|ZP_19548204.1| RNA methyltransferase [Enterococcus faecium E3346]
gi|291590867|gb|EFF22583.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1636]
gi|402932039|gb|EJX51575.1| RNA methyltransferase, TrmH family [Enterococcus faecium R497]
gi|430536396|gb|ELA76764.1| RNA methyltransferase [Enterococcus faecium E1133]
gi|430538196|gb|ELA78495.1| RNA methyltransferase [Enterococcus faecium E1185]
gi|430566455|gb|ELB05568.1| RNA methyltransferase [Enterococcus faecium E1604]
gi|430589114|gb|ELB27259.1| RNA methyltransferase [Enterococcus faecium E1630]
gi|430610171|gb|ELB47325.1| RNA methyltransferase [Enterococcus faecium E2297]
gi|430625774|gb|ELB62377.1| RNA methyltransferase [Enterococcus faecium E3346]
Length = 254
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|312170608|emb|CBX78871.1| putative RNA methylase [Erwinia amylovora ATCC BAA-2158]
Length = 231
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + G R S GS S V + S++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPGSRMRTMVSSAAGSNSWVQVKTHRSIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK ++ I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTCLKGQNMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITREALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|188532205|ref|YP_001906002.1| tRNA guanosine-2'-O-methyltransferase [Erwinia tasmaniensis Et1/99]
gi|188027247|emb|CAO95086.1| Putative tRNA/rRNA methyltransferase [Erwinia tasmaniensis Et1/99]
Length = 231
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + G R S GS S V + S++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAIGVHEVHAVWPGSRMRTMVSSAAGSNSWVQVKTHRSIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK ++ I +++ AVD + + + T L+G E G++ + E+ D + IP
Sbjct: 82 AVSCLKGQNMQILATHLSEKAVDFREVDYTRPTCILMGQEKTGITQEALELADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|407451634|ref|YP_006723358.1| hypothetical protein B739_0858 [Riemerella anatipestifer RA-CH-1]
gi|403312618|gb|AFR35459.1| hypothetical protein B739_0858 [Riemerella anatipestifer RA-CH-1]
Length = 176
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 10/146 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
VV+ NI HNVG L R+A AF + +++L G R+ + + G+T V++ +
Sbjct: 28 VVLDNIRSMHNVGALFRTADAFLIEKIVLCGITPQPPHREIHK-AALGATESVDWVYQKD 86
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPF--KKSTAFLLGNEGMGLSAKECEICDFF 117
+S+A LK++ +I GVE T +++ ++ + A +LGNE GLS + + D F
Sbjct: 87 ISEAIKELKTQGYNIIGVEQTTDSISLSDFEISPNQKYALVLGNEVEGLSDETLSLYDSF 146
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ G SLNV+V IV+ F
Sbjct: 147 IEIPQL-GTKHSLNVSVCGGIVIWSF 171
>gi|404216560|ref|YP_006670781.1| rRNA methylase [Gordonia sp. KTR9]
gi|403647359|gb|AFR50599.1| rRNA methylase [Gordonia sp. KTR9]
Length = 218
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H ++SD
Sbjct: 70 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLMHHETVSDLI 129
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T A + + L G EG G+S D V I Q+
Sbjct: 130 SWARDEGLTVVAVDNTPGARPLETADLPRDCVLLFGQEGPGVSDDAQREADLTVSIAQF- 188
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 189 GSTRSINAGVAAGIAMHAW 207
>gi|430827851|ref|ZP_19445982.1| RNA methyltransferase [Enterococcus faecium E0269]
gi|431108362|ref|ZP_19497513.1| RNA methyltransferase [Enterococcus faecium E1613]
gi|430484197|gb|ELA61227.1| RNA methyltransferase [Enterococcus faecium E0269]
gi|430569486|gb|ELB08490.1| RNA methyltransferase [Enterococcus faecium E1613]
Length = 254
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|345297276|ref|YP_004826634.1| tRNA/rRNA methyltransferase SpoU [Enterobacter asburiae LF7a]
gi|345091213|gb|AEN62849.1| tRNA/rRNA methyltransferase (SpoU) [Enterobacter asburiae LF7a]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAF-GSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + G R N + GS S V+ ++ ++ +
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGSRMRNMVSAAAGSNSWVSVKNHQTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++D AVD + + + T L+G E G+S + ++ D + IP
Sbjct: 82 AVSHLKGRGMQVLATNLSDKAVDFREIDYTRPTCILMGQEKTGISQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|215488946|ref|YP_002331377.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli O127:H6
str. E2348/69]
gi|312967980|ref|ZP_07782191.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 2362-75]
gi|417758037|ref|ZP_12406101.1| spoU rRNA Methylase family protein [Escherichia coli DEC2B]
gi|418999096|ref|ZP_13546676.1| spoU rRNA Methylase family protein [Escherichia coli DEC1A]
gi|419004412|ref|ZP_13551922.1| spoU rRNA Methylase family protein [Escherichia coli DEC1B]
gi|419010088|ref|ZP_13557503.1| spoU rRNA Methylase family protein [Escherichia coli DEC1C]
gi|419015799|ref|ZP_13563134.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC1D]
gi|419026180|ref|ZP_13573395.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC2A]
gi|419031320|ref|ZP_13578464.1| spoU rRNA Methylase family protein [Escherichia coli DEC2C]
gi|419036952|ref|ZP_13584025.1| spoU rRNA Methylase family protein [Escherichia coli DEC2D]
gi|419042015|ref|ZP_13589032.1| spoU rRNA Methylase family protein [Escherichia coli DEC2E]
gi|215267018|emb|CAS11463.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli O127:H6
str. E2348/69]
gi|312287239|gb|EFR15148.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 2362-75]
gi|377839362|gb|EHU04451.1| spoU rRNA Methylase family protein [Escherichia coli DEC1A]
gi|377839754|gb|EHU04834.1| spoU rRNA Methylase family protein [Escherichia coli DEC1C]
gi|377842901|gb|EHU07950.1| spoU rRNA Methylase family protein [Escherichia coli DEC1B]
gi|377853151|gb|EHU18054.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC1D]
gi|377859194|gb|EHU24029.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC2A]
gi|377870965|gb|EHU35638.1| spoU rRNA Methylase family protein [Escherichia coli DEC2B]
gi|377873300|gb|EHU37938.1| spoU rRNA Methylase family protein [Escherichia coli DEC2C]
gi|377875071|gb|EHU39691.1| spoU rRNA Methylase family protein [Escherichia coli DEC2D]
gi|377886727|gb|EHU51208.1| spoU rRNA Methylase family protein [Escherichia coli DEC2E]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILTTHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|421360153|ref|ZP_15810439.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|421363735|ref|ZP_15813975.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|421368699|ref|ZP_15818884.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|421370768|ref|ZP_15820931.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|421378330|ref|ZP_15828418.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|421382937|ref|ZP_15832982.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|421387261|ref|ZP_15837266.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|421391965|ref|ZP_15841930.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|421396435|ref|ZP_15846363.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|421400783|ref|ZP_15850668.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|421405391|ref|ZP_15855225.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|421406944|ref|ZP_15856754.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|421414441|ref|ZP_15864185.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|421418899|ref|ZP_15868599.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|421421081|ref|ZP_15870756.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|421427602|ref|ZP_15877221.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|421432452|ref|ZP_15882024.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|421437711|ref|ZP_15887227.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|421441711|ref|ZP_15891176.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|421443588|ref|ZP_15893029.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|436808125|ref|ZP_20527762.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|436812550|ref|ZP_20530981.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|436845710|ref|ZP_20538948.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|436853658|ref|ZP_20543486.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|436855219|ref|ZP_20544528.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|436866533|ref|ZP_20552050.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|436869395|ref|ZP_20553611.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|436882595|ref|ZP_20561349.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|436889671|ref|ZP_20565385.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|436894911|ref|ZP_20568115.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|436904775|ref|ZP_20574736.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|436914042|ref|ZP_20579244.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|436921553|ref|ZP_20583854.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|436928620|ref|ZP_20587857.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|436934607|ref|ZP_20590567.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|436941584|ref|ZP_20595090.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|436953042|ref|ZP_20601507.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|436965322|ref|ZP_20606568.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|436967735|ref|ZP_20607489.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|436978299|ref|ZP_20612441.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|436988148|ref|ZP_20616151.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|437003033|ref|ZP_20621459.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|437013942|ref|ZP_20625303.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|437032691|ref|ZP_20632071.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|437043902|ref|ZP_20636976.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|437051274|ref|ZP_20641245.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|437057221|ref|ZP_20644496.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|437063960|ref|ZP_20648275.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|437078085|ref|ZP_20655931.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|437082664|ref|ZP_20658506.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|437095918|ref|ZP_20664716.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|437114800|ref|ZP_20669184.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|437119799|ref|ZP_20671046.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|437129916|ref|ZP_20676372.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|437136312|ref|ZP_20679777.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|437148209|ref|ZP_20687377.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|437150806|ref|ZP_20688865.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|437161338|ref|ZP_20695374.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|437169732|ref|ZP_20699945.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|437174781|ref|ZP_20702368.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|437184058|ref|ZP_20708056.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|437262817|ref|ZP_20719147.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|437271351|ref|ZP_20723615.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|437274019|ref|ZP_20725050.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|437291570|ref|ZP_20731634.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|437304269|ref|ZP_20733982.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|437373032|ref|ZP_20749520.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|437430561|ref|ZP_20755764.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|437449602|ref|ZP_20759341.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|437464151|ref|ZP_20763514.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|437479451|ref|ZP_20767964.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|437491092|ref|ZP_20771318.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|437506726|ref|ZP_20775915.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|437533802|ref|ZP_20781204.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|437560185|ref|ZP_20785953.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|437572922|ref|ZP_20789346.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|437585924|ref|ZP_20793115.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|437605884|ref|ZP_20799507.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|437620180|ref|ZP_20803966.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|437646744|ref|ZP_20809089.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|437661343|ref|ZP_20812953.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|437677719|ref|ZP_20817385.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|437697445|ref|ZP_20822934.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|437708541|ref|ZP_20825966.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|437724198|ref|ZP_20829558.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|437758962|ref|ZP_20834561.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|437814128|ref|ZP_20842250.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|437899647|ref|ZP_20849759.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|437988070|ref|ZP_20853648.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|438091720|ref|ZP_20861125.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|438097257|ref|ZP_20862273.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|438115366|ref|ZP_20870489.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|445175132|ref|ZP_21397263.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|445186215|ref|ZP_21399127.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|445233093|ref|ZP_21406311.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|445345909|ref|ZP_21418511.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|445356524|ref|ZP_21421809.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
gi|395982842|gb|EJH92039.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 622731-39]
gi|395983787|gb|EJH92978.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 640631]
gi|395985765|gb|EJH94931.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639016-6]
gi|395996839|gb|EJI05883.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-6]
gi|395996955|gb|EJI05998.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 485549-17]
gi|396006052|gb|EJI15023.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-0424]
gi|396009661|gb|EJI18585.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-26]
gi|396010039|gb|EJI18953.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-70]
gi|396010401|gb|EJI19314.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 596866-22]
gi|396023087|gb|EJI31889.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629164-37]
gi|396024076|gb|EJI32866.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-46]
gi|396032419|gb|EJI41142.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 639672-50]
gi|396036483|gb|EJI45143.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-1427]
gi|396037279|gb|EJI45929.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 77-2659]
gi|396043327|gb|EJI51931.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 78-1757]
gi|396049849|gb|EJI58387.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648905 5-18]
gi|396050178|gb|EJI58710.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 8b-1]
gi|396050859|gb|EJI59378.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22510-1]
gi|396063308|gb|EJI71707.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 6-18]
gi|396070270|gb|EJI78599.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-3079]
gi|434967875|gb|ELL60658.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1882]
gi|434976121|gb|ELL68378.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1884]
gi|434978324|gb|ELL70364.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1594]
gi|434983768|gb|ELL75549.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1566]
gi|434993163|gb|ELL84601.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1580]
gi|434994160|gb|ELL85533.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1543]
gi|435003071|gb|ELL94109.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1441]
gi|435003294|gb|ELL94314.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1810]
gi|435007256|gb|ELL98110.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1558]
gi|435015459|gb|ELM05987.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1010]
gi|435017622|gb|ELM08112.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1018]
gi|435023842|gb|ELM14082.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1729]
gi|435025221|gb|ELM15390.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0895]
gi|435034405|gb|ELM24288.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0899]
gi|435040649|gb|ELM30404.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1457]
gi|435044805|gb|ELM34473.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1747]
gi|435047299|gb|ELM36893.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1444]
gi|435048705|gb|ELM38263.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0968]
gi|435061055|gb|ELM50292.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1445]
gi|435070219|gb|ELM59215.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1559]
gi|435072556|gb|ELM61463.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1565]
gi|435073258|gb|ELM62136.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1808]
gi|435078739|gb|ELM67460.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_0956]
gi|435082004|gb|ELM70630.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1455]
gi|435086235|gb|ELM74779.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1811]
gi|435092500|gb|ELM80856.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1575]
gi|435095711|gb|ELM83996.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1725]
gi|435101627|gb|ELM89772.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1745]
gi|435102087|gb|ELM90202.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1791]
gi|435109251|gb|ELM97205.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 576709]
gi|435109416|gb|ELM97369.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CDC_2010K_1795]
gi|435115681|gb|ELN03442.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 635290-58]
gi|435126271|gb|ELN13675.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-19]
gi|435128721|gb|ELN16048.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-16]
gi|435133107|gb|ELN20288.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607308-9]
gi|435136133|gb|ELN23225.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 607307-2]
gi|435145323|gb|ELN32142.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 629163]
gi|435145459|gb|ELN32271.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE15-1]
gi|435148119|gb|ELN34855.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_N202]
gi|435157449|gb|ELN43901.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_56-3991]
gi|435161392|gb|ELN47620.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_81-2490]
gi|435161929|gb|ELN48142.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_76-3618]
gi|435169825|gb|ELN55583.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL909]
gi|435176779|gb|ELN62145.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SL913]
gi|435181764|gb|ELN66817.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CVM_69-4941]
gi|435188395|gb|ELN73112.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 638970-15]
gi|435198969|gb|ELN83089.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 22-17]
gi|435206037|gb|ELN89598.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435208949|gb|ELN92334.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 40-18]
gi|435217639|gb|ELO00055.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 1-1]
gi|435219756|gb|ELO02087.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 4-1]
gi|435229587|gb|ELO10946.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642046 4-7]
gi|435234361|gb|ELO15226.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648898 4-5]
gi|435238689|gb|ELO19314.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648900 1-16]
gi|435241967|gb|ELO22280.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648899 3-17]
gi|435247286|gb|ELO27257.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 1-17]
gi|435256508|gb|ELO35812.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648902 6-8]
gi|435257871|gb|ELO37149.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648903 1-6]
gi|435260486|gb|ELO39681.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 39-2]
gi|435268786|gb|ELO47366.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 653049 13-19]
gi|435271478|gb|ELO49940.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648904 3-6]
gi|435274959|gb|ELO53053.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 642044 8-1]
gi|435276037|gb|ELO54062.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 561362 9-7]
gi|435290502|gb|ELO67423.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 543463 42-20]
gi|435293327|gb|ELO70031.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435296056|gb|ELO72479.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 33944]
gi|435309698|gb|ELO84347.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 76-2651]
gi|435315661|gb|ELO88886.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 81-2625]
gi|435321805|gb|ELO94169.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 6.0562-1]
gi|435327061|gb|ELO98837.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 62-1976]
gi|435328285|gb|ELO99863.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 53-407]
gi|435337146|gb|ELP06815.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 50-5646]
gi|444858683|gb|ELX83662.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE8a]
gi|444861616|gb|ELX86490.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE10]
gi|444869641|gb|ELX94212.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 20037]
gi|444878843|gb|ELY02957.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13-1]
gi|444887002|gb|ELY10738.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. PT23]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHSIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|16762567|ref|NP_458184.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. CT18]
gi|29144056|ref|NP_807398.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|213052646|ref|ZP_03345524.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
gi|213417916|ref|ZP_03351009.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
gi|213425217|ref|ZP_03357967.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213580806|ref|ZP_03362632.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213647939|ref|ZP_03377992.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|289826480|ref|ZP_06545592.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|378961941|ref|YP_005219427.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
gi|25331661|pir||AF0969 tRNA (guanosine-2'-O-)-methyltransferase (EC 2.1.1.34) - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16504872|emb|CAD03250.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139692|gb|AAO71258.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|374355813|gb|AEZ47574.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. P-stx-12]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIDD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|419138955|ref|ZP_13683745.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC5E]
gi|377981079|gb|EHV44339.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli DEC5E]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFN-AFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMCTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|417791982|ref|ZP_12439395.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii E899]
gi|429117399|ref|ZP_19178317.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
701]
gi|449310275|ref|YP_007442631.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii SP291]
gi|333953967|gb|EGL71856.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii E899]
gi|426320528|emb|CCK04430.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
701]
gi|449100308|gb|AGE88342.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii SP291]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRNISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVSHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITEEALSLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|238794541|ref|ZP_04638149.1| tRNA guanosine-2'-O-methyltransferase [Yersinia intermedia ATCC
29909]
gi|238726121|gb|EEQ17667.1| tRNA guanosine-2'-O-methyltransferase [Yersinia intermedia ATCC
29909]
Length = 230
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + + S GS S V + +SD
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLSSAAGSNSWVQVKTHTHISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS++ I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AIAHLKSQNMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|237728947|ref|ZP_04559428.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter sp. 30_2]
gi|226909569|gb|EEH95487.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter sp. 30_2]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASSAAGSNSWVQVKTHLTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ + ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTHLKSRGMQVLATHLSDKAVDFREIDYMRPTCILMGQEKTGITQEALDLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|62182237|ref|YP_218654.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|167549007|ref|ZP_02342766.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168233268|ref|ZP_02658326.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168235358|ref|ZP_02660416.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168241923|ref|ZP_02666855.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168260501|ref|ZP_02682474.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168818425|ref|ZP_02830425.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194444680|ref|YP_002042992.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194448230|ref|YP_002047774.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194469893|ref|ZP_03075877.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194735347|ref|YP_002116686.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|200387615|ref|ZP_03214227.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|207858980|ref|YP_002245631.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224585541|ref|YP_002639340.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|238910216|ref|ZP_04654053.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|375116579|ref|ZP_09761749.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|378957401|ref|YP_005214888.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|386593415|ref|YP_006089815.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|409247430|ref|YP_006888129.1| putative RNA methylase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|417329692|ref|ZP_12114476.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|417344697|ref|ZP_12124985.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|417353150|ref|ZP_12130168.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|417368394|ref|ZP_12139955.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|417386693|ref|ZP_12151325.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417394308|ref|ZP_12156530.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|417433355|ref|ZP_12161483.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|417514428|ref|ZP_12178237.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|417521417|ref|ZP_12183117.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|418790524|ref|ZP_13346298.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|418793395|ref|ZP_13349127.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|418799796|ref|ZP_13355461.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|418806935|ref|ZP_13362505.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|418811097|ref|ZP_13366634.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|418814657|ref|ZP_13370170.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|418822556|ref|ZP_13377968.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|418826305|ref|ZP_13381546.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|418829370|ref|ZP_13384351.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|418838150|ref|ZP_13393000.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|418839446|ref|ZP_13394281.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|418843300|ref|ZP_13398098.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|418849933|ref|ZP_13404654.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|418852728|ref|ZP_13407425.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|418858674|ref|ZP_13413287.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|418861569|ref|ZP_13416124.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|418867861|ref|ZP_13422313.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|419728804|ref|ZP_14255767.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|419735151|ref|ZP_14262035.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|419740619|ref|ZP_14267342.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|419743601|ref|ZP_14270266.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|419746752|ref|ZP_14273328.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|421448570|ref|ZP_15897963.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|421569704|ref|ZP_16015405.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|421573790|ref|ZP_16019422.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|421579226|ref|ZP_16024796.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|421582794|ref|ZP_16028326.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|436661315|ref|ZP_20517153.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|436803476|ref|ZP_20525906.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|437331882|ref|ZP_20742071.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|437344390|ref|ZP_20746298.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|437834831|ref|ZP_20845138.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|438141305|ref|ZP_20875026.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|445275134|ref|ZP_21410549.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|445325005|ref|ZP_21412466.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|62129870|gb|AAX67573.1| putative tRNA/rRNA methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|194403343|gb|ACF63565.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194406534|gb|ACF66753.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194456257|gb|EDX45096.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194710849|gb|ACF90070.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197291598|gb|EDY30950.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|199604713|gb|EDZ03258.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|205325898|gb|EDZ13737.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205332504|gb|EDZ19268.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205339031|gb|EDZ25795.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205344462|gb|EDZ31226.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205350250|gb|EDZ36881.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206710783|emb|CAR35144.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224470069|gb|ACN47899.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|320088164|emb|CBY97926.1| putative RNA methylase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|322716725|gb|EFZ08296.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SCSA50]
gi|353564240|gb|EHC30366.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Adelaide str. A4-669]
gi|353564513|gb|EHC30563.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Gaminara str. A4-567]
gi|353586714|gb|EHC46207.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353602580|gb|EHC57907.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353606028|gb|EHC60380.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353613903|gb|EHC65888.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353633881|gb|EHC80581.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353641504|gb|EHC86223.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Salmonella enterica
subsp. enterica serovar Uganda str. R8-3404]
gi|357208012|gb|AET56058.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|357953854|gb|EHJ80252.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Baildon str. R6-199]
gi|381293751|gb|EIC34892.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41573]
gi|381295972|gb|EIC37081.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41563]
gi|381298497|gb|EIC39575.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41579]
gi|381312086|gb|EIC52896.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41566]
gi|381321035|gb|EIC61563.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. 41565]
gi|383800456|gb|AFH47538.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Salmonella enterica
subsp. enterica serovar Heidelberg str. B182]
gi|392757890|gb|EJA14771.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19447]
gi|392762978|gb|EJA19788.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19567]
gi|392764970|gb|EJA21761.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19449]
gi|392780783|gb|EJA37435.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22513]
gi|392782093|gb|EJA38731.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21550]
gi|392787466|gb|EJA44007.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22425]
gi|392794030|gb|EJA50457.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21538]
gi|392796661|gb|EJA52991.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N1543]
gi|392804414|gb|EJA60574.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM N18486]
gi|392807931|gb|EJA63989.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 22462]
gi|392812627|gb|EJA68610.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21554]
gi|392816992|gb|EJA72910.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19443]
gi|392819610|gb|EJA75471.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 37978]
gi|392828462|gb|EJA84155.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19593]
gi|392832179|gb|EJA87802.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19470]
gi|392838447|gb|EJA94010.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 19536]
gi|392838924|gb|EJA94472.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 4176]
gi|396073224|gb|EJI81530.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 58-6482]
gi|402523197|gb|EJW30516.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00326]
gi|402526704|gb|EJW33974.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00322]
gi|402526984|gb|EJW34250.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00325]
gi|402532690|gb|EJW39879.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Heidelberg str. CFSAN00328]
gi|434939763|gb|ELL46531.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Pullorum str. ATCC 9120]
gi|434956620|gb|ELL50349.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS44]
gi|435019844|gb|ELM10277.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|435188678|gb|ELN73367.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 17927]
gi|435190826|gb|ELN75401.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. CHS4]
gi|435301001|gb|ELO77058.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. SARB17]
gi|444881818|gb|ELY05827.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 18569]
gi|444887746|gb|ELY11435.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|419280642|ref|ZP_13822879.1| spoU rRNA Methylase family protein [Escherichia coli DEC10E]
gi|378123744|gb|EHW85161.1| spoU rRNA Methylase family protein [Escherichia coli DEC10E]
Length = 206
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 61 AHLKGRGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|197266019|ref|ZP_03166093.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197244274|gb|EDY26894.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|377570171|ref|ZP_09799319.1| putative RNA methyltransferase [Gordonia terrae NBRC 100016]
gi|377532692|dbj|GAB44484.1| putative RNA methyltransferase [Gordonia terrae NBRC 100016]
Length = 230
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H ++SD
Sbjct: 82 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLMHHETVSDLI 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + V+ T A + + L G EG G+S D V I Q+
Sbjct: 142 AWARDARLTVVAVDNTPGARPLETADLPRDCVLLFGQEGPGVSDDAQREADLTVSIAQF- 200
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 201 GSTRSINAGVAAGIAMHAW 219
>gi|432590114|ref|ZP_19826465.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE58]
gi|431117626|gb|ELE20854.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE58]
Length = 229
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 SVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 IGMAQ-SLNVSVASALILY 159
>gi|375003604|ref|ZP_09727943.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
gi|353074519|gb|EHB40280.1| RNA methyltransferase, TrmH family [Salmonella enterica subsp.
enterica serovar Infantis str. SARB27]
Length = 218
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 71 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|239636929|ref|ZP_04677927.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus warneri
L37603]
gi|239597477|gb|EEQ79976.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus warneri
L37603]
Length = 248
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR + A S G+ HV
Sbjct: 94 LSTVIILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVSLTQTVAKASTGAIQHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LKS + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKSNGFWVAGTE-ANNATDYRDLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNK 158
++ IP G SLN +VAAS++++ F +R +GNK
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMYEV-----FRKRHSNGNK 248
>gi|431301311|ref|ZP_19507630.1| RNA methyltransferase [Enterococcus faecium E1626]
gi|430580501|gb|ELB18968.1| RNA methyltransferase [Enterococcus faecium E1626]
Length = 254
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D +
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNI 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|110597360|ref|ZP_01385647.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobium ferrooxidans DSM
13031]
gi|110340904|gb|EAT59375.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobium ferrooxidans DSM
13031]
Length = 180
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFH 58
Y+++HNI NVG++ R+A A G+ +MIL G R++ + + G+ V + +
Sbjct: 29 YLMLHNIRSMWNVGSMFRTADAAGIEKMILSGYTATPPRKEIDKT-ALGAQDSVAWEYHA 87
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQ-HPFKKSTAFLLGNEGMGLSAKECEICDFF 117
A LK ICG+EIT+ + + P ++GNE GL + E+CD
Sbjct: 88 DPLVALSALKRAGVKICGLEITEGSRPYSALTPGDFPLCLVVGNEVDGLENELLELCDEV 147
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQY G SLNV VA+ I L F
Sbjct: 148 LEIPQY-GTKHSLNVAVASGIALFEF 172
>gi|204928623|ref|ZP_03219822.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|452122464|ref|YP_007472712.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
gi|204322056|gb|EDZ07254.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|451911468|gb|AGF83274.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Javiana str. CFSAN001992]
Length = 229
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|414578459|ref|ZP_11435625.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 3233-85]
gi|415858432|ref|ZP_11532947.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri 2a str.
2457T]
gi|416284352|ref|ZP_11647198.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii ATCC 9905]
gi|417583274|ref|ZP_12234073.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_B2F1]
gi|417599072|ref|ZP_12249696.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 3030-1]
gi|417684491|ref|ZP_12333831.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella boydii 3594-74]
gi|417692031|ref|ZP_12341236.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella boydii 5216-82]
gi|417704921|ref|ZP_12354014.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-218]
gi|417719791|ref|ZP_12368668.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-227]
gi|417730817|ref|ZP_12379498.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-671]
gi|417740572|ref|ZP_12389138.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri
4343-70]
gi|419053466|ref|ZP_13600332.1| spoU rRNA Methylase family protein [Escherichia coli DEC3B]
gi|419133818|ref|ZP_13678642.1| spoU rRNA Methylase family protein [Escherichia coli DEC5D]
gi|419218077|ref|ZP_13761067.1| spoU rRNA Methylase family protein [Escherichia coli DEC8D]
gi|419805444|ref|ZP_14330580.1| RNA methyltransferase, TrmH family [Escherichia coli AI27]
gi|420289194|ref|ZP_14791375.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW10246]
gi|420338572|ref|ZP_14840126.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-315]
gi|420345735|ref|ZP_14847164.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii 965-58]
gi|424534662|ref|ZP_17977999.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4422]
gi|425128408|ref|ZP_18529566.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0586]
gi|425152556|ref|ZP_18552160.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.0221]
gi|425400966|ref|ZP_18783661.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1869]
gi|428961516|ref|ZP_19032796.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 89.0511]
gi|429828830|ref|ZP_19359830.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0109]
gi|429835272|ref|ZP_19365542.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0010]
gi|445020350|ref|ZP_21336308.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA8]
gi|445031167|ref|ZP_21346827.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1781]
gi|313647474|gb|EFS11924.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri 2a str.
2457T]
gi|320179989|gb|EFW54931.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii ATCC 9905]
gi|332084833|gb|EGI90016.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella boydii 5216-82]
gi|332089513|gb|EGI94617.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella boydii 3594-74]
gi|332749893|gb|EGJ80305.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-671]
gi|332750609|gb|EGJ81017.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri
4343-70]
gi|332997445|gb|EGK17061.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-218]
gi|333013287|gb|EGK32659.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella flexneri K-227]
gi|345334336|gb|EGW66780.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli
STEC_B2F1]
gi|345348568|gb|EGW80861.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 3030-1]
gi|377889856|gb|EHU54315.1| spoU rRNA Methylase family protein [Escherichia coli DEC3B]
gi|377970522|gb|EHV33881.1| spoU rRNA Methylase family protein [Escherichia coli DEC5D]
gi|378057785|gb|EHW20007.1| spoU rRNA Methylase family protein [Escherichia coli DEC8D]
gi|384471545|gb|EIE55620.1| RNA methyltransferase, TrmH family [Escherichia coli AI27]
gi|390787168|gb|EIO54660.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli TW10246]
gi|390858603|gb|EIP20982.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC4422]
gi|391257887|gb|EIQ16995.1| tRNA guanosine-2'-O-methyltransferase [Shigella flexneri K-315]
gi|391275787|gb|EIQ34570.1| tRNA guanosine-2'-O-methyltransferase [Shigella boydii 965-58]
gi|391281074|gb|EIQ39727.1| tRNA guanosine-2'-O-methyltransferase [Shigella sonnei 3233-85]
gi|408316315|gb|EKJ32597.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli EC1869]
gi|408564309|gb|EKK40420.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 8.0586]
gi|408593984|gb|EKK68283.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 88.0221]
gi|427202319|gb|EKV72652.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 89.0511]
gi|429251311|gb|EKY35920.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 96.0109]
gi|429252266|gb|EKY36812.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 97.0010]
gi|444627278|gb|ELW01048.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli PA8]
gi|444638033|gb|ELW11386.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli 99.1781]
Length = 206
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 61 AHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|430860478|ref|ZP_19478077.1| RNA methyltransferase [Enterococcus faecium E1573]
gi|430551876|gb|ELA91626.1| RNA methyltransferase [Enterococcus faecium E1573]
Length = 254
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIP-IKGNAESLNVGVAAGIVLYHFSL 254
>gi|375258005|ref|YP_005017175.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca KCTC
1686]
gi|397660632|ref|YP_006501334.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Klebsiella oxytoca
E718]
gi|402841611|ref|ZP_10890056.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella sp. OBRC7]
gi|423105476|ref|ZP_17093178.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5242]
gi|365907483|gb|AEX02936.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca KCTC
1686]
gi|376380793|gb|EHS93536.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5242]
gi|394348635|gb|AFN34756.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Klebsiella oxytoca
E718]
gi|402282545|gb|EJU31084.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella sp. OBRC7]
Length = 229
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ +
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|354599748|ref|ZP_09017765.1| tRNA guanosine-2'-O-methyltransferase [Brenneria sp. EniD312]
gi|353677683|gb|EHD23716.1| tRNA guanosine-2'-O-methyltransferase [Brenneria sp. EniD312]
Length = 230
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV + V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHRIHAVWPGSRMKTLASSAAGSNSWVQVKTHRTIHD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++ +VD + + + T LLG E G+S + + D + IP
Sbjct: 82 AVGHLKTQGMQILATHLSPQSVDFREIDYTRPTCILLGQEKTGISKEALRLADRDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERS----ARQVRRSFCAEKP 178
G SLNV+VA +++L+ ++R R + S A Q R F P
Sbjct: 141 MTGMVQSLNVSVACALILYE-------AQRQRQMAGMYQRQESPLDDAEQQRLLFEGGYP 193
Query: 179 ESIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ R ++R+ + DGSG V+ S+ ++ + E
Sbjct: 194 ---VLARVAKRKGLPRPYIDGSGQIVADSAWWASMQSSE 229
>gi|425280060|ref|ZP_18671277.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli
ARS4.2123]
gi|408197874|gb|EKI23121.1| tRNA (Guanosine-2'-O-)-methyltransferase [Escherichia coli
ARS4.2123]
Length = 206
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 61 AHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|415773985|ref|ZP_11486532.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 3431]
gi|416338172|ref|ZP_11674406.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli WV_060327]
gi|315618645|gb|EFU99231.1| tRNA (guanosine-2'-O-) methyltransferase [Escherichia coli 3431]
gi|320193842|gb|EFW68475.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli WV_060327]
Length = 206
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 61 AHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|414161195|ref|ZP_11417456.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876457|gb|EKS24363.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 247
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 7/147 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ H+
Sbjct: 94 LPTLMLLDGLEDPHNLGSILRTADAAGVDGVIIPKRRSVALTQTVAKASAGAIQHIPVTR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+LS LK + I G DNA D Q A ++GNEG G+S E CDF
Sbjct: 154 VTNLSQTMDKLKEEGYWIAGTA-ADNATDYRQMSADMPLAIVIGNEGHGMSRLVKEKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHINSLNASVAASLMMYEI 238
>gi|417675136|ref|ZP_12324561.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella dysenteriae
155-74]
gi|332084466|gb|EGI89661.1| tRNA (guanosine-2'-O-) methyltransferase [Shigella dysenteriae
155-74]
Length = 206
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 61 AHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|425055729|ref|ZP_18459199.1| RNA methyltransferase, TrmH family [Enterococcus faecium 505]
gi|430834188|ref|ZP_19452195.1| RNA methyltransferase [Enterococcus faecium E0679]
gi|403033230|gb|EJY44746.1| RNA methyltransferase, TrmH family [Enterococcus faecium 505]
gi|430485419|gb|ELA62325.1| RNA methyltransferase [Enterococcus faecium E0679]
Length = 254
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFMVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|237703445|ref|ZP_04533926.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 3_2_53FAA]
gi|422841695|ref|ZP_16889664.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H397]
gi|432789686|ref|ZP_20023812.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE65]
gi|432824582|ref|ZP_20058245.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE123]
gi|226902709|gb|EEH88968.1| tRNA guanosine-2'-O-methyltransferase [Escherichia sp. 3_2_53FAA]
gi|371604013|gb|EHN92647.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli H397]
gi|431334855|gb|ELG21999.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE65]
gi|431377524|gb|ELG62650.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE123]
Length = 229
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 SVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|213609646|ref|ZP_03369472.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 184
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIDD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|315501742|ref|YP_004080629.1| tRNA/rRNA methyltransferase SpoU [Micromonospora sp. L5]
gi|315408361|gb|ADU06478.1| tRNA/rRNA methyltransferase (SpoU) [Micromonospora sp. L5]
Length = 207
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++ +
Sbjct: 60 HVAIENWQHDFNIGTVVRNANAFLAAEVHIVGRRRWNRRGAMVTDRYQHVRHHPTIEEFV 119
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + G++ + + + L G EG GLSA CD I QY
Sbjct: 120 AWARDERLPVVGIDNLPGSRPMETAVLPRRCVLLFGQEGPGLSAVARSACDALFSIAQY- 178
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ I +H +
Sbjct: 179 GSTRSINAGVASGIAMHAW 197
>gi|430841708|ref|ZP_19459626.1| RNA methyltransferase [Enterococcus faecium E1007]
gi|430493766|gb|ELA70050.1| RNA methyltransferase [Enterococcus faecium E1007]
Length = 254
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLAEVIPVMKGKGFMVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|389839055|ref|YP_006341139.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii ES15]
gi|424801655|ref|ZP_18227197.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
696]
gi|387849531|gb|AFJ97628.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii ES15]
gi|423237376|emb|CCK09067.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter sakazakii
696]
Length = 229
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRNISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVNHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITEEALSLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|205354655|ref|YP_002228456.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|375125543|ref|ZP_09770707.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|445131783|ref|ZP_21381887.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
gi|205274436|emb|CAR39468.1| tRNA (guanosine-2'-O)-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326629793|gb|EGE36136.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. SG9]
gi|444849922|gb|ELX75030.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9184]
Length = 229
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPSSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|432780694|ref|ZP_20014913.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE59]
gi|432823122|ref|ZP_20056809.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE118]
gi|431324535|gb|ELG11987.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE59]
gi|431365331|gb|ELG51845.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE118]
Length = 218
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 71 SVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|156936176|ref|YP_001440092.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter sakazakii ATCC
BAA-894]
gi|156534430|gb|ABU79256.1| hypothetical protein ESA_04075 [Cronobacter sakazakii ATCC BAA-894]
Length = 229
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRNISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVNHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITEEALSLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|161505720|ref|YP_001572832.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160867067|gb|ABX23690.1| hypothetical protein SARI_03896 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 218
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 11 ICMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 71 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|359403494|ref|ZP_09196398.1| TrmH family RNA methyltransferase [Spiroplasma melliferum KC3]
gi|438119407|ref|ZP_20871615.1| tRNA/rRNA methyltransferase [Spiroplasma melliferum IPMB4A]
gi|358832725|gb|EHK51829.1| TrmH family RNA methyltransferase [Spiroplasma melliferum KC3]
gi|434155420|gb|ELL44369.1| tRNA/rRNA methyltransferase [Spiroplasma melliferum IPMB4A]
Length = 244
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAF---GSHGSTSHVNFRHFHSL 60
+V+ I+ HN G + R+ F V +I++ +R D NA S G+ ++V ++L
Sbjct: 98 LVLDQISDPHNFGAILRTCDLFNVDGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNL 157
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++A +LK + I +T A +V++ + ++GNEG G+SAK + DF +YI
Sbjct: 158 TNAIEYLKKQGFWIYATSLTTKAQNVSELKYDTPICLIVGNEGTGISAKLLKHADFNIYI 217
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VA++I+++
Sbjct: 218 PT-AGHLDSLNVSVASAILIYQI 239
>gi|161761287|ref|YP_156756.2| tRNA guanosine-2'-O-methyltransferase [Idiomarina loihiensis L2TR]
Length = 226
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM---ILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
VV+ N+ K HN+ + RSA A GV EM L + + + GS + V + ++ +
Sbjct: 22 VVMENVHKNHNLSAVVRSADAIGVHEMHAIWLTKKARLSGGTALGSQNWVKIHNHKTVGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A + + + +++++VD + + K TA LLG E G++ + +I D+ V IP
Sbjct: 82 ALEATQGRGMQVVVTHLSEHSVDFREVDYTKPTAILLGQEKYGVTDEALDIADYHVMIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 142 V-GMVQSLNVSVAGAVMLY 159
>gi|157149268|ref|YP_001456587.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter koseri ATCC
BAA-895]
gi|157086473|gb|ABV16151.1| hypothetical protein CKO_05108 [Citrobacter koseri ATCC BAA-895]
Length = 229
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEIHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVSHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|239916760|ref|YP_002956318.1| rRNA methylase [Micrococcus luteus NCTC 2665]
gi|281414782|ref|ZP_06246524.1| rRNA methylase [Micrococcus luteus NCTC 2665]
gi|239837967|gb|ACS29764.1| rRNA methylase [Micrococcus luteus NCTC 2665]
Length = 234
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF + + ++GRR +N G+ + +++ RH ++
Sbjct: 79 HVAIENWQHDLNIGTVVRTANAFNAAGVHIIGRRRWNRRGAMVTDRYLHVRHHETVEAFT 138
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + GV++ +V V F ++ + G EG GLSA+ + I QY
Sbjct: 139 AWAAGEGLPVLGVDLFPESVPVETFDFPRACVLVFGQEGPGLSAEVRAASSAVLSIAQY- 197
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 198 GSTRSINAGVAAGIAMHAW 216
>gi|418323132|ref|ZP_12934421.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
pettenkoferi VCU012]
gi|365230225|gb|EHM71335.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
pettenkoferi VCU012]
Length = 249
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 7/147 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR + A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADASGVDGIIIPKRRSVSLTQTVAKASTGAIQHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + + G E DNA D + S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAQTIEVLKDQGYWVVGTE-ADNATDYREMDANMSLAIVIGSEGQGMSRLVKDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMYEV 238
>gi|288550202|ref|ZP_05969599.2| hypothetical protein ENTCAN_08219 [Enterobacter cancerogenus ATCC
35316]
gi|288316108|gb|EFC55046.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cancerogenus
ATCC 35316]
Length = 218
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R + GS S V+ + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGARMRTMVSAAAGSNSWVSVKSHQTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++D AVD + + + T L+G E G+S + ++ D + IP
Sbjct: 71 AVSHLKGRGMQVLATNLSDKAVDFREIDYTRPTCILMGQEKTGISQEALDLADRDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|429106812|ref|ZP_19168681.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter malonaticus
681]
gi|429112229|ref|ZP_19173999.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter malonaticus
507]
gi|426293535|emb|CCJ94794.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter malonaticus
681]
gi|426313386|emb|CCK00112.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter malonaticus
507]
Length = 229
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRNISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITEEALSLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|119947098|ref|YP_944778.1| tRNA guanosine-2'-O-methyltransferase [Psychromonas ingrahamii 37]
gi|119865702|gb|ABM05179.1| tRNA guanosine-2'-O-methyltransferase [Psychromonas ingrahamii 37]
Length = 234
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHS---LSD 62
V + + K HN+ + R+A A GVS++ + +T N+ + HS L D
Sbjct: 22 VFLEQVHKAHNLAAIVRTADAVGVSDVHATWENKTTQISGNTATGSQNWVNLHSHETLED 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A L+++ I ++D+A+D + + K TA L+G E G+S + + D V IP
Sbjct: 82 AVKALRAQGMQIIATNLSDSAIDFREVDYTKPTAILMGQEKHGISPEALALADQDVIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMCQSLNVSVASALILY 159
>gi|422021487|ref|ZP_16367999.1| tRNA guanosine-2'-O-methyltransferase [Providencia sneebia DSM
19967]
gi|414099345|gb|EKT60988.1| tRNA guanosine-2'-O-methyltransferase [Providencia sneebia DSM
19967]
Length = 237
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSD 62
+ + I K HNV + RSA A G+ ++ + + + G S V HS D
Sbjct: 22 ICLEEIHKPHNVSAIVRSADAVGIHQIHAIWPDQHVKLSVSSAAGCNSWVKVVTHHSTED 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS++ I ++DNAVD + + + T ++G E G+S + + D + IP
Sbjct: 82 AISQLKSQNMQILVTNLSDNAVDFREIDYTRPTCIMMGQEKKGISPQALALADQHIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|432566043|ref|ZP_19802599.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE51]
gi|431089611|gb|ELD95417.1| tRNA guanosine-2'-O-methyltransferase [Escherichia coli KTE51]
Length = 229
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V + A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSQMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|419020723|ref|ZP_13568020.1| spoU rRNA Methylase family protein [Escherichia coli DEC1E]
gi|377856684|gb|EHU21543.1| spoU rRNA Methylase family protein [Escherichia coli DEC1E]
Length = 206
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 61 AHLKGQGMQILTTHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|56180485|gb|AAV83207.1| rRNA methylase SpoU [Idiomarina loihiensis L2TR]
Length = 215
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM---ILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
VV+ N+ K HN+ + RSA A GV EM L + + + GS + V + ++ +
Sbjct: 11 VVMENVHKNHNLSAVVRSADAIGVHEMHAIWLTKKARLSGGTALGSQNWVKIHNHKTVGE 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A + + + +++++VD + + K TA LLG E G++ + +I D+ V IP
Sbjct: 71 ALEATQGRGMQVVVTHLSEHSVDFREVDYTKPTAILLGQEKYGVTDEALDIADYHVMIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 131 V-GMVQSLNVSVAGAVMLY 148
>gi|421685013|ref|ZP_16124790.1| spoU rRNA Methylase family protein [Shigella flexneri 1485-80]
gi|404334979|gb|EJZ61454.1| spoU rRNA Methylase family protein [Shigella flexneri 1485-80]
Length = 206
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 61 AHLKGQGMQILTTHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|417337374|ref|ZP_12119544.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|417534856|ref|ZP_12188504.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
gi|353564855|gb|EHC30811.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|353657914|gb|EHC98239.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Urbana str. R8-2977]
Length = 206
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ I G R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 61 AHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|161616825|ref|YP_001590790.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|168464947|ref|ZP_02698839.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|418761434|ref|ZP_13317578.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|418765419|ref|ZP_13321504.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|418770229|ref|ZP_13326252.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|418777810|ref|ZP_13333736.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|418781879|ref|ZP_13337754.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|418784983|ref|ZP_13340817.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|418804037|ref|ZP_13359648.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
gi|419789860|ref|ZP_14315537.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|419794653|ref|ZP_14320262.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|161366189|gb|ABX69957.1| hypothetical protein SPAB_04644 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|195632097|gb|EDX50581.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|392614227|gb|EIW96676.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 15]
gi|392614687|gb|EIW97132.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. Levine 1]
gi|392737598|gb|EIZ94752.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21539]
gi|392740322|gb|EIZ97443.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35185]
gi|392740435|gb|EIZ97555.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35199]
gi|392743267|gb|EJA00341.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 33953]
gi|392745644|gb|EJA02668.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35188]
gi|392753158|gb|EJA10096.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 21559]
gi|392771869|gb|EJA28581.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Newport str. CVM 35202]
Length = 229
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|197250973|ref|YP_002148674.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|198245054|ref|YP_002217703.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|416427425|ref|ZP_11693560.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|416432637|ref|ZP_11696316.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|416437503|ref|ZP_11698853.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|416443443|ref|ZP_11703056.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|416450343|ref|ZP_11707472.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|416460248|ref|ZP_11714631.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|416463640|ref|ZP_11716055.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|416479809|ref|ZP_11722566.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|416490062|ref|ZP_11726640.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|416501959|ref|ZP_11732507.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|416508293|ref|ZP_11735997.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|416517282|ref|ZP_11739403.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|416525383|ref|ZP_11741596.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|416538854|ref|ZP_11749618.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|416541320|ref|ZP_11750907.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|416552784|ref|ZP_11757345.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|416562214|ref|ZP_11761971.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|416571102|ref|ZP_11766501.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|416579987|ref|ZP_11771561.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|416586408|ref|ZP_11775492.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|416589490|ref|ZP_11777075.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|416597625|ref|ZP_11782206.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|416607067|ref|ZP_11788281.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|416611507|ref|ZP_11790881.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|416623018|ref|ZP_11797196.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|416631128|ref|ZP_11801041.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|416645113|ref|ZP_11807279.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|416648172|ref|ZP_11808885.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|416661306|ref|ZP_11815480.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|416668088|ref|ZP_11818714.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|416681237|ref|ZP_11823647.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|416695701|ref|ZP_11827778.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|416709057|ref|ZP_11833861.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|416712952|ref|ZP_11836614.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|416721127|ref|ZP_11842658.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|416722855|ref|ZP_11843681.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|416735003|ref|ZP_11851405.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|416741453|ref|ZP_11855147.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|416746595|ref|ZP_11857885.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|416755260|ref|ZP_11861921.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|416765014|ref|ZP_11868437.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|416771836|ref|ZP_11873015.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|417361533|ref|ZP_12135404.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|417376739|ref|ZP_12145843.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|417470807|ref|ZP_12166912.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|418485022|ref|ZP_13054009.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|418491165|ref|ZP_13057692.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|418494721|ref|ZP_13061172.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|418499862|ref|ZP_13066263.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|418505138|ref|ZP_13071487.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|418510370|ref|ZP_13076651.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|418525067|ref|ZP_13091050.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|421883550|ref|ZP_16314780.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|440765833|ref|ZP_20944845.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|440767396|ref|ZP_20946374.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|440773477|ref|ZP_20952371.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|445143048|ref|ZP_21386329.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|445149186|ref|ZP_21389011.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
gi|197214676|gb|ACH52073.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197939570|gb|ACH76903.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|322612909|gb|EFY09861.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322618974|gb|EFY15861.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625249|gb|EFY22076.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322630083|gb|EFY26856.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634275|gb|EFY31010.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635824|gb|EFY32533.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642973|gb|EFY39551.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645034|gb|EFY41565.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322649866|gb|EFY46289.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322653073|gb|EFY49408.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322661108|gb|EFY57336.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662403|gb|EFY58616.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322667281|gb|EFY63447.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674342|gb|EFY70435.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678450|gb|EFY74511.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680956|gb|EFY76990.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687108|gb|EFY83081.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323193170|gb|EFZ78388.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323198251|gb|EFZ83357.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323200869|gb|EFZ85939.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323210464|gb|EFZ95350.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216247|gb|EGA00975.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220470|gb|EGA04924.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225334|gb|EGA09568.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228448|gb|EGA12579.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234269|gb|EGA18357.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237254|gb|EGA21321.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244773|gb|EGA28777.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323245852|gb|EGA29842.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250965|gb|EGA34841.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257287|gb|EGA40986.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262211|gb|EGA45772.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323264578|gb|EGA48082.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268867|gb|EGA52325.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|353583745|gb|EHC44021.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353592172|gb|EHC50264.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Inverness str. R8-3668]
gi|353624340|gb|EHC73396.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Montevideo str. S5-403]
gi|363552482|gb|EHL36771.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB31]
gi|363559044|gb|EHL43222.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. LQC 10]
gi|363561115|gb|EHL45244.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. ATCC BAA710]
gi|363561216|gb|EHL45344.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. SARB30]
gi|363563956|gb|EHL48021.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 29N]
gi|363573296|gb|EHL57182.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 42N]
gi|363574599|gb|EHL58466.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 4441 H]
gi|366056665|gb|EHN20977.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 80959-06]
gi|366061482|gb|EHN25728.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035318]
gi|366063409|gb|EHN27628.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035278]
gi|366068759|gb|EHN32893.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035321]
gi|366070050|gb|EHN34167.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035320]
gi|366076876|gb|EHN40909.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. CT_02035327]
gi|366829802|gb|EHN56677.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|372207014|gb|EHP20515.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008286]
gi|379986934|emb|CCF87053.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|436411484|gb|ELP09435.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH11G1113]
gi|436415822|gb|ELP13737.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH10GFN094]
gi|436420101|gb|ELP17970.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Agona str. SH08SF124]
gi|444848775|gb|ELX73896.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SL1438]
gi|444858481|gb|ELX83467.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. HWS51]
Length = 229
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|241888871|ref|ZP_04776177.1| RNA methyltransferase, TrmH family, group 3 [Gemella haemolysans
ATCC 10379]
gi|241864547|gb|EER68923.1| RNA methyltransferase, TrmH family, group 3 [Gemella haemolysans
ATCC 10379]
Length = 271
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFH 58
+ +++ +I HN+G + R+A A GV +I+ RR S G+ H+
Sbjct: 123 TLLILDHIEDPHNLGAIIRTAEASGVKAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVS 182
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+L+DA LK K I G + + + D T+ A ++GNEG G+S CDF
Sbjct: 183 NLTDAIKKLKEKGFWIAGTTLAERSEDYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLY 242
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
++P G SLN +VAA I+++
Sbjct: 243 HLPML-GKIQSLNASVAAGIIMYE 265
>gi|329767864|ref|ZP_08259378.1| RNA methyltransferase [Gemella haemolysans M341]
gi|328838652|gb|EGF88251.1| RNA methyltransferase [Gemella haemolysans M341]
Length = 271
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFH 58
+ +++ +I HN+G + R+A A GV +I+ RR S G+ H+
Sbjct: 123 TLLILDHIEDPHNLGAIIRTAEASGVKAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVS 182
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+L+DA LK K I G + + + D T+ A ++GNEG G+S CDF
Sbjct: 183 NLTDAIKKLKEKGFWIAGTTLAERSEDYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLY 242
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
++P G SLN +VAA I+++
Sbjct: 243 HLPML-GKIQSLNASVAAGIIMYE 265
>gi|292486540|ref|YP_003529406.1| RNA methylase [Erwinia amylovora CFBP1430]
gi|292897775|ref|YP_003537144.1| tRNA (guanosine-2'-O)-methyltransferase [Erwinia amylovora ATCC
49946]
gi|428783460|ref|ZP_19000956.1| putative RNA methylase [Erwinia amylovora ACW56400]
gi|291197623|emb|CBJ44717.1| tRNA (guanosine-2'-O)-methyltransferase [Erwinia amylovora ATCC
49946]
gi|291551953|emb|CBA18990.1| putative RNA methylase [Erwinia amylovora CFBP1430]
gi|426277951|gb|EKV55673.1| putative RNA methylase [Erwinia amylovora ACW56400]
Length = 231
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAF-GSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R + GS S V + S++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPGSRMRTMVSAAAGSNSWVQVKTHRSIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTCLKGHNMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITREALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|296394021|ref|YP_003658905.1| tRNA/rRNA methyltransferase [Segniliparus rotundus DSM 44985]
gi|296181168|gb|ADG98074.1| tRNA/rRNA methyltransferase (SpoU) [Segniliparus rotundus DSM
44985]
Length = 221
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+VV+ N+A N+GT+ R+A AF + +VGRR +N G+ + + + H + +
Sbjct: 73 HVVIENLAHDANIGTVVRTANAFLAQAVHIVGRRRWNRRGAMVTDRYQHVHHHATPEEFA 132
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ + V+ T A V + A L G EG GLS + I V I Q+
Sbjct: 133 RYAQAHHLAVVAVDNTHGAEPVETFALPRRCALLFGQEGSGLSPELRAIAQSAVAIAQF- 191
Query: 125 GGTASLNVTVAASIVLHHFGV 145
G T S+NV VAA +V+H + V
Sbjct: 192 GSTRSINVGVAAGVVMHTWIV 212
>gi|329769072|ref|ZP_08260494.1| RNA methyltransferase [Gemella sanguinis M325]
gi|328839563|gb|EGF89139.1| RNA methyltransferase [Gemella sanguinis M325]
Length = 271
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFH 58
+ +++ +I HN+G + R+A A GV +I+ RR S G+ H+
Sbjct: 123 TLLILDHIEDPHNLGAIIRTAEASGVKGIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVS 182
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
SL+DA LK K I G + + + + T+ A ++GNEG G+S + CDF
Sbjct: 183 SLTDAIKKLKEKGFWIAGTTLAERSEEYTKIAKDVPLAIVIGNEGEGMSKVVTKECDFLY 242
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
++P G SLN +VAA I+++
Sbjct: 243 HLPML-GKIQSLNASVAAGIIMYE 265
>gi|359776978|ref|ZP_09280277.1| putative RNA methyltransferase [Arthrobacter globiformis NBRC
12137]
gi|359305717|dbj|GAB14106.1| putative RNA methyltransferase [Arthrobacter globiformis NBRC
12137]
Length = 223
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF E+ ++GRR +N G+ + + + RH ++ D
Sbjct: 76 HIAIENWQHDLNIGTVVRTANAFLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHPTVEDFV 135
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +++ I G++I ++V + + + + G EG GL+ + E + + I Q+
Sbjct: 136 AWAQAEGLAIIGIDIFPDSVPLETYELPQKCVLVFGQEGPGLTPEVHEAAEATLSIEQF- 194
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA+I +H +
Sbjct: 195 GSTRSINAGSAAAIAMHAW 213
>gi|417542590|ref|ZP_12193990.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353658365|gb|EHC98571.1| tRNA-methyltransferase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
Length = 229
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPSSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|397163156|ref|ZP_10486621.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter radicincitans
DSM 16656]
gi|396095303|gb|EJI92848.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter radicincitans
DSM 16656]
Length = 229
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPSNRMRTMASSAAGSNSWVEVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVGVLKARGMQVLATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|357050805|ref|ZP_09112001.1| hypothetical protein HMPREF9478_01984 [Enterococcus saccharolyticus
30_1]
gi|355380430|gb|EHG27566.1| hypothetical protein HMPREF9478_01984 [Enterococcus saccharolyticus
30_1]
Length = 252
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFNAFGSHGSTSHVNFRHFHSLS- 61
+++++ N+ NVGT+ R+A A G + + L G D + S NF H L
Sbjct: 108 NWLILDNVQDPGNVGTMIRTADAAGFAGVFLGTGTADRYSTKVLRSMQGSNF-HLPILEG 166
Query: 62 DARVF---LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
D F LK++ I G E+ AV T+ K + AF+LGNEG G+ ++ D V
Sbjct: 167 DVPAFIQKLKAQGTAIYGTELNKEAVSYTELSKKGTAAFILGNEGQGVHPDILKLTDQNV 226
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
YIP YG SLNV +AA I+++ F
Sbjct: 227 YIPIYGQA-ESLNVAIAAGILMYFF 250
>gi|421844837|ref|ZP_16277993.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|411773700|gb|EKS57228.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii ATCC
8090 = MTCC 1658]
gi|455645439|gb|EMF24499.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter freundii GTC
09479]
Length = 229
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEEVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASSAAGSNSWVQVKTHLTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTHLKNRGMQVLATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|381398695|ref|ZP_09924098.1| tRNA/rRNA methyltransferase (SpoU) [Microbacterium laevaniformans
OR221]
gi|380774186|gb|EIC07487.1| tRNA/rRNA methyltransferase (SpoU) [Microbacterium laevaniformans
OR221]
Length = 221
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ RSA AFG +E+ ++G+R +N G+ + + + RH ++
Sbjct: 79 HVAIENWQHDMNIGSIVRSANAFGAAEVHIIGKRRWNRRGAMVTDRYQHVRHHEDIAAFT 138
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ D +V V + + L G EG GLSA+ V I QY
Sbjct: 139 AWAEDAEIPVIAVDNVDGSVPVDRAELPQRCVLLFGQEGPGLSAEAVAAASAVVEITQY- 197
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N + AA++V++ +
Sbjct: 198 GSTRSINASAAAAVVMYEW 216
>gi|300742572|ref|ZP_07072593.1| RNA methyltransferase, TrmH family [Rothia dentocariosa M567]
gi|300381757|gb|EFJ78319.1| RNA methyltransferase, TrmH family [Rothia dentocariosa M567]
Length = 226
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF E+ ++G++ +N G+ + + + RH ++ D
Sbjct: 79 HVAIENWQHDLNIGTVVRTANAFLAKEVHIIGKKRWNRRGAMVTDRYQHVRHHPTIEDFV 138
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + DI G++I ++V + + K+ + G EG GLS + + I Q+
Sbjct: 139 AWAQGEGLDIIGIDIFPDSVPLETYDLPKNCVLVFGQEGPGLSEEIHAAARDTLSIEQF- 197
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA I +H +
Sbjct: 198 GSTRSMNAATAAGIAMHAW 216
>gi|431586278|ref|ZP_19520793.1| RNA methyltransferase [Enterococcus faecium E1861]
gi|431737145|ref|ZP_19526100.1| RNA methyltransferase [Enterococcus faecium E1972]
gi|430593456|gb|ELB31442.1| RNA methyltransferase [Enterococcus faecium E1861]
gi|430599229|gb|ELB36941.1| RNA methyltransferase [Enterococcus faecium E1972]
Length = 254
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-Q 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMK-GNAESLNVGVAAGIVLYHFSL 254
>gi|146309755|ref|YP_001174829.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter sp. 638]
gi|145316631|gb|ABP58778.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter sp. 638]
Length = 229
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++S+
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGNRLRTMASSAAGSNSWVTVKTHPTISE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK+ I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAQLKASGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|293571651|ref|ZP_06682672.1| hypothetical tRNA/rRNA methyltransferase [Enterococcus faecium
E980]
gi|291608321|gb|EFF37622.1| hypothetical tRNA/rRNA methyltransferase [Enterococcus faecium
E980]
Length = 254
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-Q 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNAE-SLNVGVAAGIVLYHFSL 254
>gi|436611986|ref|ZP_20513927.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434969283|gb|ELL61995.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
Length = 229
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHSIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 142 I-GMVQSLNVSVAFALILY 159
>gi|257883080|ref|ZP_05662733.1| RNA methyltransferase [Enterococcus faecium 1,231,502]
gi|416135642|ref|ZP_11598539.1| Putative tRNA/rRNA methyltransferase [Enterococcus faecium E4452]
gi|424797252|ref|ZP_18222865.1| RNA methyltransferase, TrmH family [Enterococcus faecium S447]
gi|424858042|ref|ZP_18282096.1| RNA methyltransferase, TrmH family [Enterococcus faecium R499]
gi|424958254|ref|ZP_18372910.1| RNA methyltransferase, TrmH family [Enterococcus faecium R446]
gi|424961449|ref|ZP_18375892.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1986]
gi|424967876|ref|ZP_18381551.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1140]
gi|424995372|ref|ZP_18407255.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV168]
gi|424999412|ref|ZP_18411029.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV165]
gi|425001750|ref|ZP_18413238.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV161]
gi|425004443|ref|ZP_18415751.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV102]
gi|425011101|ref|ZP_18422018.1| RNA methyltransferase, TrmH family [Enterococcus faecium E422]
gi|425017206|ref|ZP_18427728.1| RNA methyltransferase, TrmH family [Enterococcus faecium C621]
gi|257818738|gb|EEV46066.1| RNA methyltransferase [Enterococcus faecium 1,231,502]
gi|364092114|gb|EHM34515.1| Putative tRNA/rRNA methyltransferase [Enterococcus faecium E4452]
gi|402921489|gb|EJX41933.1| RNA methyltransferase, TrmH family [Enterococcus faecium S447]
gi|402927428|gb|EJX47394.1| RNA methyltransferase, TrmH family [Enterococcus faecium R499]
gi|402941053|gb|EJX59812.1| RNA methyltransferase, TrmH family [Enterococcus faecium R446]
gi|402943686|gb|EJX62155.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1986]
gi|402953514|gb|EJX71228.1| RNA methyltransferase, TrmH family [Enterococcus faecium P1140]
gi|402977476|gb|EJX93290.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV168]
gi|402978872|gb|EJX94582.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV165]
gi|402985447|gb|EJY00654.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV161]
gi|402989283|gb|EJY04218.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV102]
gi|402997956|gb|EJY12246.1| RNA methyltransferase, TrmH family [Enterococcus faecium E422]
gi|403004898|gb|EJY18657.1| RNA methyltransferase, TrmH family [Enterococcus faecium C621]
Length = 254
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSSADQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|227502001|ref|ZP_03932050.1| RNA methyltransferase [Corynebacterium accolens ATCC 49725]
gi|227077285|gb|EEI15248.1| RNA methyltransferase [Corynebacterium accolens ATCC 49725]
Length = 257
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + RH S+
Sbjct: 109 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLRHHESVDKLI 168
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +D + ++ T V + + + L G EG G+SA + I Q+
Sbjct: 169 AWASEEDLTVVAIDNTPGCVPLETAELPERSLLLFGQEGPGVSAAAQDAALMTCSIAQF- 227
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 228 GSTRSINAGVAAGIAMHAW 246
>gi|383809303|ref|ZP_09964823.1| RNA methyltransferase, TrmH family [Rothia aeria F0474]
gi|383447655|gb|EID50632.1| RNA methyltransferase, TrmH family [Rothia aeria F0474]
Length = 246
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF E+ ++G++ +N G+ + + + RH ++ D
Sbjct: 99 HVAIENWQHDLNIGTVVRTANAFLAKEVHIIGKKRWNRRGAMVTDRYQHVRHHPTIEDFV 158
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + DI G++I ++V + + K+ + G EG GLS + + I Q+
Sbjct: 159 AWAQGEGLDIIGIDIFPDSVPLETYDLPKNCVLVFGQEGPGLSEEIHAAARDTLSIEQF- 217
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA I +H +
Sbjct: 218 GSTRSMNAATAAGIAMHAW 236
>gi|383782715|ref|YP_005467282.1| putative RNA methyltransferase [Actinoplanes missouriensis 431]
gi|381375948|dbj|BAL92766.1| putative RNA methyltransferase [Actinoplanes missouriensis 431]
Length = 210
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++ D
Sbjct: 63 HVAIENWQHDFNIGTVVRNANAFLAAEVHIVGRRRWNRRGAMVTDRYQHVRHHPAIEDFV 122
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + G++ + + + L G EG GLS CD I QY
Sbjct: 123 AWAAEAGLPVVGIDNLPGSRPMETTTLPRRCVLLFGQEGPGLSGPARAACDQMFSIAQY- 181
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ I +H +
Sbjct: 182 GSTRSINAGVASGIAMHAW 200
>gi|311112473|ref|YP_003983695.1| TrmH family RNA methyltransferase [Rothia dentocariosa ATCC 17931]
gi|310943967|gb|ADP40261.1| TrmH family RNA methyltransferase [Rothia dentocariosa ATCC 17931]
Length = 246
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF E+ ++G++ +N G+ + + + RH ++ D
Sbjct: 99 HVAIENWQHDLNIGTVVRTANAFLAKEVHIIGKKRWNRRGAMVTDRYQHVRHHPTIEDFV 158
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + DI G++I ++V + + K+ + G EG GLS + + I Q+
Sbjct: 159 AWAQGEGLDIIGIDIFPDSVPLETYDLPKNCVLVFGQEGPGLSEEIHAAARDTLSIEQF- 217
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA I +H +
Sbjct: 218 GSTRSMNAATAAGIAMHAW 236
>gi|261209460|ref|ZP_05923823.1| RNA methyltransferase [Enterococcus faecium TC 6]
gi|289566871|ref|ZP_06447279.1| RNA methyltransferase [Enterococcus faecium D344SRF]
gi|260076588|gb|EEW64352.1| RNA methyltransferase [Enterococcus faecium TC 6]
gi|289161320|gb|EFD09212.1| RNA methyltransferase [Enterococcus faecium D344SRF]
Length = 254
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AFG++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFGMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + D V
Sbjct: 169 DLAEVIPVMKGKGFTVYGTELNEEAHALDKVEKTEDFAIIMGNEGQGVSQEILSSTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|169348435|ref|ZP_02866373.1| hypothetical protein CLOSPI_00150 [Clostridium spiroforme DSM 1552]
gi|169293904|gb|EDS76037.1| RNA methyltransferase, TrmH family [Clostridium spiroforme DSM
1552]
Length = 238
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGR-----RDFNAFGSHGSTSHVNFRHFHS 59
Y+++ ++ N+GTL R+A AF + ++IL D G+ H+N +
Sbjct: 98 YLILDDLQDPGNIGTLIRTALAFSIDQVILSNNCVDLYNDKLLRSMQGANFHINCI-YDD 156
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK + I G + +N D+ Q + AF++GNEG G++ + CD+ Y
Sbjct: 157 LKTVISTLKKNNVKIIGSAL-ENGQDIKQIKISEKMAFIVGNEGNGMNKDILQECDYVGY 215
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP SLNV +A SI+++HF
Sbjct: 216 IPI--NTIESLNVAIAGSIMMYHF 237
>gi|423122733|ref|ZP_17110417.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5246]
gi|376392014|gb|EHT04681.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5246]
Length = 253
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + R A + GS S V + S+ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPSSRMRTMASAAAGSNSWVQVKTHRSIDD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVSHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITRQALALADRDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|418514662|ref|ZP_13080860.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
gi|366078390|gb|EHN42392.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Pomona str. ATCC 10729]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN---AFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + + A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSWMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|417488336|ref|ZP_12172711.1| tRNA-methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353632187|gb|EHC79314.1| tRNA-methyltransferase, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
Length = 178
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|375121221|ref|ZP_09766388.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
gi|326625488|gb|EGE31833.1| tRNA guanosine-2'-O-methyltransferase [Salmonella enterica subsp.
enterica serovar Dublin str. SD3246]
Length = 206
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ I G R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 61 AHLKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|311277429|ref|YP_003939660.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae SCF1]
gi|308746624|gb|ADO46376.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae SCF1]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V+ + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGNRMRTMASTAAGSNSWVSVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D+AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAQLKGRGMQILATHLSDSAVDFREIDYTRPTCILMGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|378981324|ref|YP_005229465.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|419974046|ref|ZP_14489467.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979551|ref|ZP_14494842.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419987227|ref|ZP_14502350.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419993378|ref|ZP_14508320.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997074|ref|ZP_14511873.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420004746|ref|ZP_14519379.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420010899|ref|ZP_14525365.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420014971|ref|ZP_14529274.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420022437|ref|ZP_14536605.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420027690|ref|ZP_14541680.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420033974|ref|ZP_14547770.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420039084|ref|ZP_14552723.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420044958|ref|ZP_14558432.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420051007|ref|ZP_14564300.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420056566|ref|ZP_14569721.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420062237|ref|ZP_14575213.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420066237|ref|ZP_14579038.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420074490|ref|ZP_14587095.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420076584|ref|ZP_14589054.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420083499|ref|ZP_14595779.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421910567|ref|ZP_16340346.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421918463|ref|ZP_16347990.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|428149354|ref|ZP_18997172.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428938115|ref|ZP_19011247.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae VA360]
gi|364520735|gb|AEW63863.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397345432|gb|EJJ38556.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397346628|gb|EJJ39741.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397349053|gb|EJJ42150.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397358646|gb|EJJ51361.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397363938|gb|EJJ56574.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397364411|gb|EJJ57042.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397377019|gb|EJJ69260.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397377526|gb|EJJ69757.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397384543|gb|EJJ76661.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397393016|gb|EJJ84789.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397393674|gb|EJJ85425.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397403497|gb|EJJ95059.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397410161|gb|EJK01452.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397410652|gb|EJK01926.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397420514|gb|EJK11584.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397428608|gb|EJK19343.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397429999|gb|EJK20700.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397435209|gb|EJK25832.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397446914|gb|EJK37118.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397451116|gb|EJK41206.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|410115529|emb|CCM82971.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410119216|emb|CCM90615.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426306305|gb|EKV68410.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae VA360]
gi|427540682|emb|CCM93310.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + +++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPSSRMRTMASAAAGSNSWVQVKTHRTIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D A+D + + + T L+G E G++ + + D + IP
Sbjct: 82 AVSHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|429085566|ref|ZP_19148537.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter condimenti
1330]
gi|426545392|emb|CCJ74578.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter condimenti
1330]
Length = 229
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++SD
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + +++ AVD + + + T L+G E G++ + ++ D + +P
Sbjct: 82 AVSHLKARGMQVLATHLSEKAVDFREVDYTRPTCILMGQEKTGITQEALDLADQDIIVPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|377578524|ref|ZP_09807501.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia hermannii
NBRC 105704]
gi|377540110|dbj|GAB52666.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia hermannii
NBRC 105704]
Length = 242
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMSTMASSAAGSNSWVEVKTHRTIQD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGELKGRGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQQALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|431762344|ref|ZP_19550906.1| RNA methyltransferase [Enterococcus faecium E3548]
gi|430625036|gb|ELB61686.1| RNA methyltransferase [Enterococcus faecium E3548]
Length = 254
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNAE-SLNVGVAAGIVLYHFSL 254
>gi|227551945|ref|ZP_03981994.1| TrmH family RNA methyltransferase [Enterococcus faecium TX1330]
gi|257895463|ref|ZP_05675116.1| RNA methyltransferase [Enterococcus faecium Com12]
gi|293378329|ref|ZP_06624498.1| RNA methyltransferase, TrmH family [Enterococcus faecium PC4.1]
gi|227178850|gb|EEI59822.1| TrmH family RNA methyltransferase [Enterococcus faecium TX1330]
gi|257832028|gb|EEV58449.1| RNA methyltransferase [Enterococcus faecium Com12]
gi|292643193|gb|EFF61334.1| RNA methyltransferase, TrmH family [Enterococcus faecium PC4.1]
Length = 254
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNAE-SLNVGVAAGIVLYHFSL 254
>gi|302865196|ref|YP_003833833.1| tRNA/rRNA methyltransferase [Micromonospora aurantiaca ATCC 27029]
gi|302568055|gb|ADL44257.1| tRNA/rRNA methyltransferase (SpoU) [Micromonospora aurantiaca ATCC
27029]
Length = 207
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++ +
Sbjct: 60 HVAIENWQHDFNIGTVVRNANAFLAAEVHIVGRRRWNRRGAMVTDRYQHVRHHPTIEEFV 119
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + G++ + + + L G EG GLSA C+ I QY
Sbjct: 120 AWARDERLPVVGIDNLPGSRPMETAVLPRRCVLLFGQEGPGLSAVARSACEALFSIAQY- 178
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ I +H +
Sbjct: 179 GSTRSINAGVASGIAMHAW 197
>gi|332159669|ref|YP_004296246.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|386310361|ref|YP_006006417.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Yersinia enterocolitica
subsp. palearctica Y11]
gi|433548793|ref|ZP_20504841.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Yersinia
enterocolitica IP 10393]
gi|318603765|emb|CBY25263.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325663899|gb|ADZ40543.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. palearctica 105.5R(r)]
gi|330860934|emb|CBX71212.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
W22703]
gi|431790307|emb|CCO67881.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Yersinia
enterocolitica IP 10393]
Length = 219
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 16/218 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + S GS S V + ++D
Sbjct: 11 VCLEEVHKPHNVSAIIRTADAVGIHQIHAIWPTPAMYTRLSSAAGSNSWVQVKTHSHITD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 71 AITHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISKEALAMADKDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLHHFGVW---AGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
G SLNV+VA++++L+ AG +RT+ V++E Q R F P
Sbjct: 131 I-GMVQSLNVSVASALILYEAQRQRQNAGMYQRTQS----VLSED--EQQRLLFEGGYP- 182
Query: 180 SIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ + ++R+ + D G ++ + A+ + E
Sbjct: 183 --VLAQVAKRKGLPQPYIDEQGQVIADAQWWSAMQSTE 218
>gi|311744568|ref|ZP_07718368.1| TrmH family RNA methyltransferase [Aeromicrobium marinum DSM 15272]
gi|311312187|gb|EFQ82104.1| TrmH family RNA methyltransferase [Aeromicrobium marinum DSM 15272]
Length = 209
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF +E+ ++GRR +N G+ + + + RH ++ +
Sbjct: 62 HVAIENWQHDFNIGSIVRTANAFAAAEVHIIGRRRWNRRGAMVTERYQHVRHHATVEEFA 121
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++D + G++ D +V + +S + G EG GLS + +C + I QY
Sbjct: 122 HWAGAEDLPVLGIDNVDGSVPIESAVLPRSCVLVFGQEGPGLSPEARRLCRSTLSIAQY- 180
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA+I +H +
Sbjct: 181 GSTRSINAGAAAAIAMHTW 199
>gi|123440446|ref|YP_001004440.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|418243496|ref|ZP_12869972.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|420261066|ref|ZP_14763726.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. enterocolitica WA-314]
gi|122087407|emb|CAL10188.1| tRNA (guanosine-2'-O-)-methyltransferase [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|351777039|gb|EHB19291.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. palearctica PhRBD_Ye1]
gi|404511570|gb|EKA25445.1| tRNA guanosine-2'-O-methyltransferase [Yersinia enterocolitica
subsp. enterocolitica WA-314]
Length = 230
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 16/218 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + S GS S V + ++D
Sbjct: 22 VCLEEVHKPHNVSAIIRTADAVGIHQIHAIWPTPAMYTRLSSAAGSNSWVQVKTHSHITD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 82 AITHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISKEALAMADKDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLHHFGVW---AGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
G SLNV+VA++++L+ AG +RT+ V++E Q R F P
Sbjct: 142 I-GMVQSLNVSVASALILYEAQRQRQNAGMYQRTQS----VLSED--EQQRLLFEGGYP- 193
Query: 180 SIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ + ++R+ + D G ++ + A+ + E
Sbjct: 194 --VLAQVAKRKGLPQPYIDEQGQVIADAQWWSAMQSTE 229
>gi|306836991|ref|ZP_07469940.1| tRNA/rRNA methyltransferase [Corynebacterium accolens ATCC 49726]
gi|304567130|gb|EFM42746.1| tRNA/rRNA methyltransferase [Corynebacterium accolens ATCC 49726]
Length = 242
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + RH S+
Sbjct: 94 HIAIENFENDGNIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLRHHESVDKLI 153
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +D + ++ T V + + L G EG G+SA + I Q+
Sbjct: 154 AWASEEDLTVVAIDNTPGCVPLETAELPERALLLFGQEGPGVSAAAQDAALMTCSIAQF- 212
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 213 GSTRSINAGVAAGIAMHAW 231
>gi|332686708|ref|YP_004456482.1| rRNA methylase [Melissococcus plutonius ATCC 35311]
gi|332370717|dbj|BAK21673.1| rRNA methylase [Melissococcus plutonius ATCC 35311]
Length = 261
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFNAFGS----HGSTSHVNFRHFHS 59
++++ NI NVGT+ R+A A G++ +IL G D + + GS H++ H S
Sbjct: 114 WLLLDNIQDPGNVGTMIRTADAAGLAGVILGEGTADIYSTKTLRSMQGSNYHLSILH-AS 172
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L + K+ + G E+T +V TQ + ++GNEG G++ D ++
Sbjct: 173 LPAVLSQFQEKEIPVFGTEVTQRSVAYTQVKVPHTYGLMVGNEGQGINQSLLTQVDQVIH 232
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G + SLNV VAA I++ HF
Sbjct: 233 IP-MKGASESLNVAVAAGILIFHF 255
>gi|375098181|ref|ZP_09744446.1| rRNA methylase [Saccharomonospora marina XMU15]
gi|374658914|gb|EHR53747.1| rRNA methylase [Saccharomonospora marina XMU15]
Length = 218
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + + +VGRR +N G+ + + + RH S++
Sbjct: 68 HVAIENFKHDHNIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLRHHESVAGLV 127
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F ++ I GV+ A V + L G EG GLS + V I Q+
Sbjct: 128 EFAAAEGLPIVGVDNMPGAQPVETAALPRECVLLFGQEGPGLSPQAQRAATLVVSIAQF- 186
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ IV+H +
Sbjct: 187 GSTRSINAGVASGIVMHTW 205
>gi|431033276|ref|ZP_19491122.1| RNA methyltransferase [Enterococcus faecium E1590]
gi|430564377|gb|ELB03561.1| RNA methyltransferase [Enterococcus faecium E1590]
Length = 254
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNAE-SLNVGVAAGIVLYHFSL 254
>gi|260599948|ref|YP_003212519.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter turicensis
z3032]
gi|260219125|emb|CBA34480.1| tRNA guanosine-2'-O-methyltransferase [Cronobacter turicensis
z3032]
Length = 229
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRNIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITEEALRLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|425061762|ref|ZP_18464967.1| RNA methyltransferase, TrmH family, partial [Enterococcus faecium
503]
gi|403040582|gb|EJY51649.1| RNA methyltransferase, TrmH family, partial [Enterococcus faecium
503]
Length = 268
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 125 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 182
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 183 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNV 242
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 243 YIPMKGNA-ESLNVGVAAGIVLYHFSL 268
>gi|257886892|ref|ZP_05666545.1| RNA methyltransferase [Enterococcus faecium 1,141,733]
gi|257890478|ref|ZP_05670131.1| RNA methyltransferase [Enterococcus faecium 1,231,410]
gi|257893082|ref|ZP_05672735.1| RNA methyltransferase [Enterococcus faecium 1,231,408]
gi|260558938|ref|ZP_05831125.1| RNA methyltransferase [Enterococcus faecium C68]
gi|293559777|ref|ZP_06676297.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1162]
gi|293568626|ref|ZP_06679941.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1071]
gi|314950192|ref|ZP_07853477.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0082]
gi|383329257|ref|YP_005355141.1| RNA methyltransferase [Enterococcus faecium Aus0004]
gi|424791877|ref|ZP_18218178.1| RNA methyltransferase, TrmH family [Enterococcus faecium V689]
gi|424847654|ref|ZP_18272208.1| RNA methyltransferase, TrmH family [Enterococcus faecium R501]
gi|424954540|ref|ZP_18369435.1| RNA methyltransferase, TrmH family [Enterococcus faecium R494]
gi|424985305|ref|ZP_18397788.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV69]
gi|424987656|ref|ZP_18400023.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV38]
gi|424991501|ref|ZP_18403648.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV26]
gi|425008965|ref|ZP_18420011.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV1]
gi|425014831|ref|ZP_18425485.1| RNA methyltransferase, TrmH family [Enterococcus faecium E417]
gi|425040429|ref|ZP_18444902.1| RNA methyltransferase, TrmH family [Enterococcus faecium 513]
gi|431752242|ref|ZP_19540925.1| RNA methyltransferase [Enterococcus faecium E2620]
gi|431757086|ref|ZP_19545717.1| RNA methyltransferase [Enterococcus faecium E3083]
gi|431780946|ref|ZP_19569104.1| RNA methyltransferase [Enterococcus faecium E4389]
gi|257822946|gb|EEV49878.1| RNA methyltransferase [Enterococcus faecium 1,141,733]
gi|257826838|gb|EEV53464.1| RNA methyltransferase [Enterococcus faecium 1,231,410]
gi|257829461|gb|EEV56068.1| RNA methyltransferase [Enterococcus faecium 1,231,408]
gi|260075046|gb|EEW63361.1| RNA methyltransferase [Enterococcus faecium C68]
gi|291588586|gb|EFF20419.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1071]
gi|291606260|gb|EFF35674.1| RNA methyltransferase, TrmH family [Enterococcus faecium E1162]
gi|313643502|gb|EFS08082.1| RNA 2'-O ribose methyltransferase substrate binding [Enterococcus
faecium TX0082]
gi|378938951|gb|AFC64023.1| RNA methyltransferase [Enterococcus faecium Aus0004]
gi|402918391|gb|EJX39088.1| RNA methyltransferase, TrmH family [Enterococcus faecium V689]
gi|402919002|gb|EJX39644.1| RNA methyltransferase, TrmH family [Enterococcus faecium R501]
gi|402936533|gb|EJX55704.1| RNA methyltransferase, TrmH family [Enterococcus faecium R494]
gi|402966221|gb|EJX82875.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV69]
gi|402973892|gb|EJX89977.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV38]
gi|402976653|gb|EJX92527.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV26]
gi|402991029|gb|EJY05861.1| RNA methyltransferase, TrmH family [Enterococcus faecium ERV1]
gi|402997598|gb|EJY11914.1| RNA methyltransferase, TrmH family [Enterococcus faecium E417]
gi|403012880|gb|EJY26047.1| RNA methyltransferase, TrmH family [Enterococcus faecium 513]
gi|430613733|gb|ELB50732.1| RNA methyltransferase [Enterococcus faecium E2620]
gi|430619375|gb|ELB56202.1| RNA methyltransferase [Enterococcus faecium E3083]
gi|430638468|gb|ELB74403.1| RNA methyltransferase [Enterococcus faecium E4389]
Length = 254
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNAE-SLNVGVAAGIVLYHFSL 254
>gi|423126406|ref|ZP_17114085.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5250]
gi|376397978|gb|EHT10608.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca 10-5250]
Length = 229
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ +
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|354721376|ref|ZP_09035591.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter mori LMG 25706]
Length = 229
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V GR + GS S V+ ++ ++ +
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPDGRMRNTVSAAAGSNSWVSVKNHRTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + + T L+G E G+S + ++ D + IP
Sbjct: 82 AVSHLKGRGMQILATNLSAKAVDFREIDYTRPTCILMGQEKTGISQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|429102433|ref|ZP_19164407.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter turicensis
564]
gi|426289082|emb|CCJ90520.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter turicensis
564]
Length = 229
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRNIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITEEALRLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|259906722|ref|YP_002647078.1| tRNA guanosine-2'-O-methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|385786673|ref|YP_005817782.1| tRNA guanosine-2'-O-methyltransferase [Erwinia sp. Ejp617]
gi|387869423|ref|YP_005800792.1| RNA methylase [Erwinia pyrifoliae DSM 12163]
gi|224962344|emb|CAX53799.1| tRNA/rRNA methyltransferase [Erwinia pyrifoliae Ep1/96]
gi|283476505|emb|CAY72320.1| putative RNA methylase [Erwinia pyrifoliae DSM 12163]
gi|310765945|gb|ADP10895.1| tRNA guanosine-2'-O-methyltransferase [Erwinia sp. Ejp617]
Length = 231
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R + GS S V + S+++
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPGSRMRTMVSAAAGSNSWVQVKTHRSIAE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK ++ I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVACLKGQNMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITREALDLADGDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|336247783|ref|YP_004591493.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter aerogenes KCTC
2190]
gi|444354107|ref|YP_007390251.1| tRNA (Guanosine18-2'-O-)-methyltransferase (EC 2.1.1.34)
[Enterobacter aerogenes EA1509E]
gi|334733839|gb|AEG96214.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter aerogenes KCTC
2190]
gi|443904937|emb|CCG32711.1| tRNA (Guanosine18-2'-O-)-methyltransferase (EC 2.1.1.34)
[Enterobacter aerogenes EA1509E]
Length = 229
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAIGVHEVHAIWPGSRMRTMASAAAGSNSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D A+D + + + T L+G E G++ + + D + IP
Sbjct: 82 AVSHLKGRGMQILATHLSDKAIDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|159036337|ref|YP_001535590.1| tRNA/rRNA methyltransferase SpoU [Salinispora arenicola CNS-205]
gi|157915172|gb|ABV96599.1| tRNA/rRNA methyltransferase (SpoU) [Salinispora arenicola CNS-205]
Length = 207
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
E +V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++
Sbjct: 58 EFHVAIENWRHDLNIGTVVRNANAFLAAEVHIVGRRRWNRRGAMVTDRYQHVRHHETIEG 117
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ + G++ + + + L G EG GLSA CD I Q
Sbjct: 118 FVAWAAGAGLSVVGIDNLPGSRPLETTTLPRRCVLLFGQEGPGLSAPARAACDQLFSIAQ 177
Query: 123 YGGGTASLNVTVAASIVLHHF 143
Y G T S+N VA+ I +H +
Sbjct: 178 Y-GSTRSINAGVASGIAMHAW 197
>gi|430838369|ref|ZP_19456315.1| RNA methyltransferase [Enterococcus faecium E0688]
gi|430491611|gb|ELA68063.1| RNA methyltransferase [Enterococcus faecium E0688]
Length = 254
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSGNFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VAA IVL+HF +
Sbjct: 229 YIPMKGNAE-SLNVGVAAGIVLYHFSL 254
>gi|379727290|ref|YP_005319475.1| rRNA methylase [Melissococcus plutonius DAT561]
gi|376318193|dbj|BAL61980.1| rRNA methylase [Melissococcus plutonius DAT561]
Length = 261
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFNAFGS----HGSTSHVNFRHFHS 59
++++ NI NVGT+ R+A A G++ +IL G D + + GS H+ H S
Sbjct: 114 WLLLDNIQDPGNVGTMIRTADAAGLAGVILGEGTADIYSTKTLRSMQGSNYHLPILH-AS 172
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L + K+ + G E+T +V TQ + ++GNEG G++ D ++
Sbjct: 173 LPAVLSQFQEKEIPVFGTEVTQRSVAYTQVKVPHTYGLMVGNEGQGINQSLLTQVDQVIH 232
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G + SLNV VAA I++ HF
Sbjct: 233 IP-MKGASESLNVAVAAGILIFHF 255
>gi|429088728|ref|ZP_19151460.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter universalis
NCTC 9529]
gi|426508531|emb|CCK16572.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter universalis
NCTC 9529]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRNIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKARGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITEEALRLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|300714631|ref|YP_003739434.1| tRNA/rRNA methyltransferase [Erwinia billingiae Eb661]
gi|299060467|emb|CAX57574.1| Putative tRNA/rRNA methyltransferase [Erwinia billingiae Eb661]
Length = 232
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + G R S GS S V + +++D
Sbjct: 22 VCMEQVHKPHNVAAVIRTADAVGVHEVHAVWPGSRMRTMVSSAAGSNSWVQVKTHSNIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVGHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQQALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|363422016|ref|ZP_09310097.1| RNA methyltransferase [Rhodococcus pyridinivorans AK37]
gi|359733577|gb|EHK82569.1| RNA methyltransferase [Rhodococcus pyridinivorans AK37]
Length = 228
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V + +VGRR +N G+ + + + H HS DA
Sbjct: 80 HVAIENFAHDANIGTVVRTANAFAVGTVHIVGRRRWNRRGAMVTDRYQHLLH-HSDVDAL 138
Query: 65 V-FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
V + +D +I V+ T +V + + L G EG G++ + V I Q+
Sbjct: 139 VAWAAEQDLEIVAVDNTPGSVRLETATLPRRCLLLFGQEGPGVTEAARNVASMTVSIAQF 198
Query: 124 GGGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 199 -GSTRSINAGVAAGIAMHAW 217
>gi|152972505|ref|YP_001337651.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238897101|ref|YP_002921847.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262045611|ref|ZP_06018630.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|329996955|ref|ZP_08302652.1| RNA methyltransferase, TrmH family [Klebsiella sp. MS 92-3]
gi|365141033|ref|ZP_09346924.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella sp. 4_1_44FAA]
gi|386037140|ref|YP_005957053.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae KCTC
2242]
gi|402778410|ref|YP_006633956.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|424832971|ref|ZP_18257699.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|424931189|ref|ZP_18349561.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425083772|ref|ZP_18486869.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425093885|ref|ZP_18496969.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428932116|ref|ZP_19005700.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae JHCK1]
gi|449048163|ref|ZP_21731133.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae hvKP1]
gi|150957354|gb|ABR79384.1| putative tRNA/rRNA methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238549429|dbj|BAH65780.1| putative tRNA/rRNA methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259037037|gb|EEW38289.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328539245|gb|EGF65274.1| RNA methyltransferase, TrmH family [Klebsiella sp. MS 92-3]
gi|339764268|gb|AEK00489.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae KCTC
2242]
gi|363653085|gb|EHL92075.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella sp. 4_1_44FAA]
gi|402539382|gb|AFQ63531.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Klebsiella pneumoniae
subsp. pneumoniae 1084]
gi|405598264|gb|EKB71493.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405610381|gb|EKB83185.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407805376|gb|EKF76627.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|414710417|emb|CCN32121.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426307383|gb|EKV69465.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae JHCK1]
gi|448877130|gb|EMB12100.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae hvKP1]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + +++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPSSRMRTMASAAAGSNSWVQVKTHRTIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D A+D + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|383192242|ref|YP_005202370.1| rRNA methylase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371590500|gb|AEX54230.1| rRNA methylase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 232
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R + GS S V R ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEIHAVWPTTRMKTLVSSAAGSNSWVQVRTHKTIQD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +K+K I +++ AVD + + T LLG E G++ + + D + IP
Sbjct: 82 AVAKMKAKGMQILATNLSEKAVDFRAIDYTRPTCILLGQEKTGITPEALALADSDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|397689430|ref|YP_006526684.1| tRNA/rRNA methyltransferase (SpoU) [Melioribacter roseus P3M]
gi|395810922|gb|AFN73671.1| tRNA/rRNA methyltransferase (SpoU) [Melioribacter roseus P3M]
Length = 178
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVG-----RRDFNAFGSHGSTSHVNFRHFHS 59
Y V+HNI +NVG++ R++ V ++ L G + S G+ V + +
Sbjct: 28 YAVLHNIRSSYNVGSILRTSDGAMVEKLYLCGFTPAPPKKEVLKTSLGAEESVAWEYAKD 87
Query: 60 LSDARVFLKSKDCDICGVEITDNA---VDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ LKSK IC +E+TDN+ ++T++ F ++GNE G++ E+CDF
Sbjct: 88 TKSVILELKSKGIKICALELTDNSKPYYNLTKNDF--PLCLVVGNEISGVTDDILELCDF 145
Query: 117 FVYIPQYGGGTASLNVTVAASI 138
+ IPQY G SLNV VA I
Sbjct: 146 SIEIPQY-GIKQSLNVAVAYGI 166
>gi|288932987|ref|YP_003437046.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella variicola At-22]
gi|290511781|ref|ZP_06551149.1| tRNA (guanosine-2'-O-)-methyltransferase [Klebsiella sp. 1_1_55]
gi|288887716|gb|ADC56034.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella variicola At-22]
gi|289775571|gb|EFD83571.1| tRNA (guanosine-2'-O-)-methyltransferase [Klebsiella sp. 1_1_55]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + +++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPSSRMRTMASAAAGSNSWVQVKTHRTIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D A+D + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|257898078|ref|ZP_05677731.1| RNA methyltransferase [Enterococcus faecium Com15]
gi|257835990|gb|EEV61064.1| RNA methyltransferase [Enterococcus faecium Com15]
Length = 254
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 9/145 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-Q 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQGILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
YIP G SLNV VAA IVL+HF
Sbjct: 229 YIPMK-GNAESLNVGVAAGIVLYHF 252
>gi|288956990|ref|YP_003447331.1| RNA methyltransferase [Azospirillum sp. B510]
gi|288909298|dbj|BAI70787.1| RNA methyltransferase [Azospirillum sp. B510]
Length = 194
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLSDA 63
V I+K NVG L R+A AFG S + R+ + G+T H+ ++D
Sbjct: 9 VERISKPGNVGNLMRTAHAFGASFFFAIDPEPDLRETKLVDTSGATLHLPLYIHDRVAD- 67
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
F KDC + GVE+TD+AV++ A++LG E LS E CD V IP
Sbjct: 68 --FTLPKDCALVGVELTDDAVELPSFRHPSRAAYVLGPERDSLSPALLERCDHVVKIPM- 124
Query: 124 GGGTASLNVTVAASIVLHHFGVWAG-FSERT 153
+ +NV VA ++V++ + G F+ER
Sbjct: 125 ---SFCINVGVAGALVMYDRMISLGRFAERP 152
>gi|257869609|ref|ZP_05649262.1| RNA methyltransferase [Enterococcus gallinarum EG2]
gi|257803773|gb|EEV32595.1| RNA methyltransferase [Enterococcus gallinarum EG2]
Length = 255
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFNAFGSHGSTSHVNFRHFHSLS- 61
+++++ N+ NVGT+ R+A A G + + L G D + S NF H L
Sbjct: 111 NWLILDNVQDPGNVGTMIRTADAAGFAGVFLGTGTADRYSTKVLRSMQGSNF-HLPILEG 169
Query: 62 DARVF---LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
D F LK++ I G E+ AV T+ K + AF+LGNEG G+ + D V
Sbjct: 170 DVPAFIQKLKAQGTAIYGTELNKEAVSYTELSKKGTAAFILGNEGQGVHPDILGLTDQNV 229
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
YIP YG SLNV +AA I+++ F
Sbjct: 230 YIPIYGQA-ESLNVAIAAGILMYFF 253
>gi|206577394|ref|YP_002235981.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae 342]
gi|206566452|gb|ACI08228.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae 342]
Length = 229
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + +++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPSSRMRTMASAAAGSNSWVQVKTHRTIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D A+D + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQEKTGITQEALALADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|255326412|ref|ZP_05367494.1| tRNA/rRNA methyltransferase [Rothia mucilaginosa ATCC 25296]
gi|255296452|gb|EET75787.1| tRNA/rRNA methyltransferase [Rothia mucilaginosa ATCC 25296]
Length = 251
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A A E+ ++GRR +N G+ + + + RH ++ D
Sbjct: 103 HVAIENWQHDLNIGTVVRTANAMLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHPTIEDFV 162
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + +I G++I ++V + + K + G EG GLS + + I Q+
Sbjct: 163 AWAQGEGLEIIGIDIFPDSVPLETYDLPKKCVLVFGQEGPGLSEELHAAARDTLSIEQF- 221
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA I +H +
Sbjct: 222 GSTRSMNAATAAGIAMHAW 240
>gi|383829707|ref|ZP_09984796.1| rRNA methylase [Saccharomonospora xinjiangensis XJ-54]
gi|383462360|gb|EID54450.1| rRNA methylase [Saccharomonospora xinjiangensis XJ-54]
Length = 231
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + +VGRR +N G+ + + + H +S
Sbjct: 83 HVAIENFQHDHNIGTVVRTANAFAAKAVHIVGRRRWNRRGAMVTDRYQHLHHHAEVSGLV 142
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ T + + + L G EG GLS V I Q+
Sbjct: 143 EFAAEQGLRVVAVDNTPGSQPIETAVLPRDCVLLFGQEGPGLSGDAQRAASMVVSIAQF- 201
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 202 GTTRSINAGVAAGIVMHAW 220
>gi|300774602|ref|ZP_07084465.1| SpoU family RNA methylase [Chryseobacterium gleum ATCC 35910]
gi|300506417|gb|EFK37552.1| SpoU family RNA methylase [Chryseobacterium gleum ATCC 35910]
Length = 176
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFR 55
I +++ NI HNVG R+A AF + ++IL G R+ + + G+T V++
Sbjct: 24 IPLVIILDNIRSMHNVGAAFRTADAFLIEKIILCGITPQPPHREIHK-AALGATESVDWS 82
Query: 56 HFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEI 113
H + A LKS +I G+E T ++ +T KS A +LGNE G+S +
Sbjct: 83 HEADTNTAVADLKSNGYEIIGIEQTTDSQMITDFTIDKSKKYALILGNEVEGISDEVLPN 142
Query: 114 CDFFVYIPQYGGGTASLNVTVAASIVLHHFG 144
D F+ IPQ G SLNV+V IV+ F
Sbjct: 143 IDVFLEIPQL-GTKHSLNVSVCGGIVMWEFA 172
>gi|283457160|ref|YP_003361728.1| rRNA methylase [Rothia mucilaginosa DY-18]
gi|283133143|dbj|BAI63908.1| rRNA methylase [Rothia mucilaginosa DY-18]
Length = 253
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A A E+ ++GRR +N G+ + + + RH ++ D
Sbjct: 105 HVAIENWQHDLNIGTVVRTANAMLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHPTIEDFV 164
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + +I G++I ++V + + K + G EG GLS + + I Q+
Sbjct: 165 AWAQGEGLEIIGIDIFPDSVPLETYDLPKKCVLVFGQEGPGLSEELHAAARDTLSIEQF- 223
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA I +H +
Sbjct: 224 GSTRSMNAATAAGIAMHAW 242
>gi|428776587|ref|YP_007168374.1| tRNA guanosine-2'-O-methyltransferase [Halothece sp. PCC 7418]
gi|428690866|gb|AFZ44160.1| tRNA guanosine-2'-O-methyltransferase [Halothece sp. PCC 7418]
Length = 223
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGV-SEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSD 62
V++ ++ K HN + R+ A GV S + D AF + GS V+ L
Sbjct: 28 VLLEDVHKPHNFSAIIRTCDAVGVFSAHGVYTEGDVPAFSETAKGSQKWVDIHTHPDLKT 87
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK+++ I +T+NAVD Q + + T LLG E G+S + + D +YIP
Sbjct: 88 AIGHLKNQNHTIYAAHLTENAVDYRQPDYTQPTCILLGAEKWGVSEEAISLVDQAIYIPM 147
Query: 123 YGGGTASLNVTVAASIVL 140
+ G SLNV+VAA+++L
Sbjct: 148 F-GMVQSLNVSVAAAVIL 164
>gi|403251957|ref|ZP_10918272.1| rRNA methylase [actinobacterium SCGC AAA027-L06]
gi|402914702|gb|EJX35710.1| rRNA methylase [actinobacterium SCGC AAA027-L06]
Length = 217
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
+ + N N+G++ R+A AF VS + +VG+RD+N G+ + ++ H ++ + +
Sbjct: 68 IAIENWQHDLNIGSIVRTANAFNVSAVHIVGKRDWNRRGAMVTDRYLTVHHHATVQEFKK 127
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ ++ I G++ + + K L G EG G+S + +C + I QY G
Sbjct: 128 WCDEQNLPIIGIDNLPISKQLENTDLPKRCVMLFGQEGAGMSDEGVAVCSVVLAISQY-G 186
Query: 126 GTASLNVTVAASIVLHHFGV 145
T S+N + A +I ++ + +
Sbjct: 187 STRSMNASAAGAIAMYAWAM 206
>gi|163788241|ref|ZP_02182687.1| RNA methyltransferase, TrmH family protein [Flavobacteriales
bacterium ALC-1]
gi|159876561|gb|EDP70619.1| RNA methyltransferase, TrmH family protein [Flavobacteriales
bacterium ALC-1]
Length = 167
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
+V NI+ N+G+L R A AFG+ E+I G+ + G S + +V + +
Sbjct: 19 LVCDNISNAPNIGSLFRIADAFGIEELIFCGKDV--SLGKRMTKTSRSTEKYVTHKIEEN 76
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPF--KKSTAFLLGNEGMGLSAKECEICDFF 117
+ D LK+K+ + +EIT N+ D++Q K+ A +LG+E G+S +CD
Sbjct: 77 IKDVIARLKTKNHFLIALEITGNSQDLSQFTLNTKQPIAVILGDENFGVSDDIINLCDAV 136
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
++I YG +S+NV A SI L+
Sbjct: 137 IHINMYGNN-SSMNVVQATSITLYEL 161
>gi|148657561|ref|YP_001277766.1| RNA methyltransferase [Roseiflexus sp. RS-1]
gi|148569671|gb|ABQ91816.1| RNA methyltransferase, TrmH family, group 3 [Roseiflexus sp. RS-1]
Length = 252
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ +I NVGTL R+A GV +++ GRR S G+ H+ +L
Sbjct: 100 LLLDHIQDPQNVGTLLRTAEVVGVHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTNL 159
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ ++ + GVE + A + + A +LG EG GL+ E CDF V +
Sbjct: 160 AATIEQIQHAGVWVVGVEDDERAYEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVRL 219
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G ASLNV VA SIVL+H
Sbjct: 220 PMR-GQIASLNVAVAGSIVLYH 240
>gi|296119026|ref|ZP_06837599.1| SpoU rRNA methylase family protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295968124|gb|EFG81376.1| SpoU rRNA methylase family protein [Corynebacterium ammoniagenes
DSM 20306]
Length = 216
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V+ + +VGRR +N G+ + + + H ++++
Sbjct: 68 HIAIENFENDANIGTVVRTANAFAVNTVHIVGRRRWNRRGAMVTDRYQHLEHHDTVTELM 127
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + ++ T +V + + L G EG G++A+ E + I Q+
Sbjct: 128 AWAREHEIAVVAIDNTPGSVPLETAQLPERCLLLFGQEGPGVTAEAQESAEMTCSIAQF- 186
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 187 GSTRSINAGVAAGIAMHTW 205
>gi|254391080|ref|ZP_05006288.1| tRNA/rRNA methyltransferase [Streptomyces clavuligerus ATCC 27064]
gi|197704775|gb|EDY50587.1| tRNA/rRNA methyltransferase [Streptomyces clavuligerus ATCC 27064]
Length = 182
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSH---GSTSHVNFRHF 57
E +++ N+ NVG++ R+A A GV + L G NA G+ +++ + F
Sbjct: 26 EVALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPRNAKAQKICMGTDRYLDVQTF 85
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+L +A +++ + G+E+ D AV + + +T +GNE G+S + +CD
Sbjct: 86 ETLPEAVERVRADGYRLVGLELADEAVPLHEADLSGATCIAVGNEDHGISPQALGMCDAV 145
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF--GVWAGFS 150
+IPQ G SLNV A ++ + WAG
Sbjct: 146 AFIPQL-GRVGSLNVATALAVACYEVRRQDWAGLP 179
>gi|399024620|ref|ZP_10726653.1| rRNA methylase [Chryseobacterium sp. CF314]
gi|398080070|gb|EJL70898.1| rRNA methylase [Chryseobacterium sp. CF314]
Length = 176
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 10/151 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFR 55
I +++ NI HNVG R+A AF + +++L G R+ + + G+T V++
Sbjct: 24 IPLVIILDNIRSMHNVGATFRTADAFLIEKIVLCGITPQPPHREIHK-AALGATESVDWA 82
Query: 56 HFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEI 113
+ +++ LKS+ ++ G+E T N+ +T +S A +LGNE G+S + E
Sbjct: 83 YEKNINTIINDLKSRGYEVVGIEQTSNSTMITDFMVDRSKKYALILGNEVEGISDEALEN 142
Query: 114 CDFFVYIPQYGGGTASLNVTVAASIVLHHFG 144
D F+ IPQ G SLNV+V IV+ F
Sbjct: 143 IDVFLEIPQL-GTKHSLNVSVCGGIVMWEFA 172
>gi|149195670|ref|ZP_01872727.1| putative rRNA methylase [Lentisphaera araneosa HTCC2155]
gi|149141132|gb|EDM29528.1| putative rRNA methylase [Lentisphaera araneosa HTCC2155]
Length = 262
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRH 56
E +++ ++K NVGT+ARSA A GV LV R+ + +G S G S +
Sbjct: 112 EQIIMLAELSKNDNVGTIARSAAALGVKSY-LVPRQGPHPYGRRALRVSMGYISRLKVSV 170
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ L + L+S + E + +A+D++ L+G+EG+GLS K E CD
Sbjct: 171 YDDLLNTISELQSLGYQVIAAEASQHAIDLSTLEVPNKWVLLMGHEGLGLSQKVQEACDC 230
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGV 145
V I + S NV VAA+I+++ +
Sbjct: 231 VVKI-EMDEDIKSFNVGVAAAILMYQMAI 258
>gi|294815551|ref|ZP_06774194.1| rRNA methylase [Streptomyces clavuligerus ATCC 27064]
gi|326443902|ref|ZP_08218636.1| putative tRNA/rRNA methyltransferase [Streptomyces clavuligerus
ATCC 27064]
gi|294328150|gb|EFG09793.1| rRNA methylase [Streptomyces clavuligerus ATCC 27064]
Length = 179
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGR--RDFNAFGSH---GSTSHVNFRHF 57
E +++ N+ NVG++ R+A A GV + L G NA G+ +++ + F
Sbjct: 23 EVALLLENVQSPFNVGSIVRTAAALGVGRLYLAGNTASPRNAKAQKICMGTDRYLDVQTF 82
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+L +A +++ + G+E+ D AV + + +T +GNE G+S + +CD
Sbjct: 83 ETLPEAVERVRADGYRLVGLELADEAVPLHEADLSGATCIAVGNEDHGISPQALGMCDAV 142
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF--GVWAGFS 150
+IPQ G SLNV A ++ + WAG
Sbjct: 143 AFIPQL-GRVGSLNVATALAVACYEVRRQDWAGLP 176
>gi|154247282|ref|YP_001418240.1| RNA methyltransferase [Xanthobacter autotrophicus Py2]
gi|154161367|gb|ABS68583.1| RNA methyltransferase, TrmH family, group 3 [Xanthobacter
autotrophicus Py2]
Length = 288
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+V+ I HNVG + RSA AF VS ++ R A G + G HV F +L
Sbjct: 141 LVLDQITDPHNVGAIVRSAAAFAVSAIVTTARHSPAATGVLAKSASGGLEHVPFCLVTNL 200
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ A LK + G++ ++ D+ P + A +LG EG GL E CD I
Sbjct: 201 ARALTELKENGMLVVGLD-SEGPADLEDTPMRAPLALVLGAEGKGLRQLTRETCDVLARI 259
Query: 121 PQYGGGTASLNVTVAASIVL 140
G SLNV+ AA++ L
Sbjct: 260 -DLPGAIKSLNVSNAAALSL 278
>gi|406669619|ref|ZP_11076887.1| hypothetical protein HMPREF9707_00790 [Facklamia ignava CCUG 37419]
gi|405582961|gb|EKB56935.1| hypothetical protein HMPREF9707_00790 [Facklamia ignava CCUG 37419]
Length = 261
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFH 58
Y++V I N+GT+ R+A A G+ +IL G + + + GS H+
Sbjct: 116 YLLVDRIQDPGNLGTMIRTADAAGIDAIIL-GEGCVDLYNDKVIRSTQGSLWHLPIVTL- 173
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
SL +A L+ D + G + +AV + + S A+L+GNEG G+ K +CD
Sbjct: 174 SLEEAIPLLQQHDIQVYGTGLDSSAVPYYELDTQNSCAWLMGNEGQGVDPKLLGMCDQVA 233
Query: 119 YIPQYGGGTASLNVTVAASIVL 140
YIP G SLNV +A +I L
Sbjct: 234 YIPMQGQAE-SLNVAIATAIFL 254
>gi|354612906|ref|ZP_09030844.1| tRNA/rRNA methyltransferase (SpoU) [Saccharomonospora
paurometabolica YIM 90007]
gi|353222707|gb|EHB87006.1| tRNA/rRNA methyltransferase (SpoU) [Saccharomonospora
paurometabolica YIM 90007]
Length = 220
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A +F + + +VGRR +N G+ + + + H +S
Sbjct: 72 HVAIENFQHDHNIGTVVRTANSFAAAAVHIVGRRRWNRRGAMVTDRYQHLHHHPEVSGLV 131
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + V+ AV V + L G EG GLS V I Q+
Sbjct: 132 EYATAHGLAVVAVDNRPGAVPVETADLPRDCVLLFGQEGPGLSPDAQAAASLVVSIAQF- 190
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 191 GTTRSINAGVAAGIVMHTW 209
>gi|422323947|ref|ZP_16404984.1| hypothetical protein HMPREF0737_00094 [Rothia mucilaginosa M508]
gi|353344740|gb|EHB89041.1| hypothetical protein HMPREF0737_00094 [Rothia mucilaginosa M508]
Length = 267
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A A E+ ++GRR +N G+ + + + RH ++ D
Sbjct: 119 HVAIENWQHDLNIGTVVRTANAMLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHPTIEDFV 178
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + +I G++I ++V + + K + G EG GLS + + I Q+
Sbjct: 179 AWAQGEGLEIIGIDIFPDSVPLETYDLPKKCVLVFGQEGPGLSEELHAAARDTLSIEQF- 237
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA I +H +
Sbjct: 238 GSTRSMNAATAAGIAMHAW 256
>gi|417643018|ref|ZP_12293089.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus warneri
VCU121]
gi|445060491|ref|YP_007385895.1| SpoU rRNA methylase family protein [Staphylococcus warneri SG1]
gi|330686272|gb|EGG97884.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU121]
gi|443426548|gb|AGC91451.1| SpoU rRNA methylase family protein [Staphylococcus warneri SG1]
Length = 248
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR + A S G+ HV
Sbjct: 94 LSTVIILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVSLTQTVAKASTGAIQHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK+ + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKNNGFWVAGTE-ANNATDYRDLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNK 158
++ IP G SLN +VAAS++++ F +R +G+K
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMYEV-----FRKRHSNGDK 248
>gi|329296824|ref|ZP_08254160.1| tRNA guanosine-2'-O-methyltransferase [Plautia stali symbiont]
Length = 239
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R S GS S V + ++D
Sbjct: 8 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSVRMRTMVSASAGSNSWVKVKTHRHIAD 67
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++D AVD + + K T L+G E G++A+ + D + IP
Sbjct: 68 AVRHLKDRGMQVLATHLSDKAVDFREIDYTKPTCILMGKEKTGITAEALALADRDIIIP- 126
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 127 IVGMVQSLNVSVASALILY 145
>gi|90407844|ref|ZP_01216020.1| putative tRNA methyltransferase [Psychromonas sp. CNPT3]
gi|90311019|gb|EAS39128.1| putative tRNA methyltransferase [Psychromonas sp. CNPT3]
Length = 228
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 4/142 (2%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHS--- 59
E V++ ++ K HN+ + R+A A GV+++ +T N+ H+
Sbjct: 19 ELTVLLEDVHKSHNLAAIVRTADAVGVNDVHATRETKTTKVCGVTATGSQNWVKIHTHEN 78
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ DA L+++ I ++D A+D + + K TA L+G E G+SA+ + D V
Sbjct: 79 IEDAIAALRAQGMQIIATNLSDTAIDFREVDYTKPTAILMGQEKTGISAQALALADQDVI 138
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IP G SLNV+VA++++L+
Sbjct: 139 IPML-GMCQSLNVSVASALILY 159
>gi|110004177|emb|CAK98515.1| putative trna/rrna methyltransferase protein [Spiroplasma citri]
Length = 244
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAF---GSHGSTSHVNFRHFHSL 60
+V+ I+ HN G + R+ F V +I++ +R D NA S G+ ++V ++L
Sbjct: 98 LVLDQISDPHNFGAILRTCDLFNVDGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNL 157
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++A +LK + I + A +V++ + ++GNEG G+SAK + DF +YI
Sbjct: 158 TNAIEYLKKQGFWIYATSLNTKAQNVSELKYDIPICLIVGNEGTGISAKLLKHADFNIYI 217
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VA++I+++
Sbjct: 218 PT-AGHLDSLNVSVASAILIYQI 239
>gi|406978365|gb|EKE00346.1| TRNA/rRNA methyltransferase [uncultured bacterium]
Length = 171
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
VV+ NI NV + R+A + GV ++I G FG S S + V+ ++
Sbjct: 25 VVLENIQYATNVANIFRTAESAGVEKVISTGITKIPPFGKDLKKVSRSSENKVSHEYYLK 84
Query: 60 LSDARVFLKSKDCDICGVEITDNAV---DVTQH-PFKKSTAFLLGNEGMGLSAKECEICD 115
D +K + + VE+TD+++ D+ + K F++GNE G++ E+CD
Sbjct: 85 TLDILPEIKRQGYTVIAVELTDSSIMLSDLKDYLKNKNKICFVVGNEDSGVNRTTLELCD 144
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
V IP YG ASLNV V+A I+L F
Sbjct: 145 SAVMIPMYGKN-ASLNVNVSAGIILFSF 171
>gi|429098689|ref|ZP_19160795.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter dublinensis
582]
gi|426285029|emb|CCJ86908.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter dublinensis
582]
Length = 229
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D +VD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKARGMQILATHLSDKSVDFREIDYTRPTCILMGQEKTGITEEALSLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|453381278|dbj|GAC84166.1| putative RNA methyltransferase [Gordonia paraffinivorans NBRC
108238]
Length = 235
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H ++++
Sbjct: 87 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLMHHGTVAELF 146
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T +V + + L G EG G+S D V I Q+
Sbjct: 147 DWARERGLAVVAVDNTPGSVPLETVELPRECVLLFGQEGPGVSDDAQRRADLTVSIAQF- 205
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 206 GSTRSINAGVAAGIAMHTW 224
>gi|395228994|ref|ZP_10407312.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter sp. A1]
gi|424732327|ref|ZP_18160905.1| guanosine 3 -bis 3 -pyrophosphohydrolase [Citrobacter sp. L17]
gi|394717700|gb|EJF23384.1| tRNA guanosine-2'-O-methyltransferase [Citrobacter sp. A1]
gi|422892986|gb|EKU32835.1| guanosine 3 -bis 3 -pyrophosphohydrolase [Citrobacter sp. L17]
Length = 229
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEEVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASSAAGSNSWVQVKTHLTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++D AVD + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVSHLKNRGMQVLATHLSDKAVDFRDIDYTRPTCILMGQEKTGITQEALDLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|365158091|ref|ZP_09354332.1| hypothetical protein HMPREF1015_00492 [Bacillus smithii 7_3_47FAA]
gi|363621920|gb|EHL73102.1| hypothetical protein HMPREF1015_00492 [Bacillus smithii 7_3_47FAA]
Length = 256
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNFRHF 57
+++++ + N+GT+ R+A A G+ ++L G+ + + + GS HV+
Sbjct: 108 TFLLIDRVQDPGNIGTMIRTADAAGIDAVVL-GKGSADPYNPKVLRAAQGSHFHVDIVQ- 165
Query: 58 HSLSDARVFLKSKDCDICGVEI--TDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
L +A ++ K + G + +N D+ HP K A L+GNEG G+S + + D
Sbjct: 166 SPLEEAISLIQKKGVSVYGTALQNAENYRDI--HP-SKGFAVLVGNEGSGVSQELLSLTD 222
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
VY+P Y G + SLNV VAA I+L+HF
Sbjct: 223 HNVYVPIY-GKSESLNVAVAAGILLYHF 249
>gi|429091297|ref|ZP_19153975.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter dublinensis
1210]
gi|426744124|emb|CCJ80088.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Cronobacter dublinensis
1210]
Length = 229
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASSAAGSNSWVEVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D +VD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVGHLKARGMQILATHLSDKSVDFREIDYTRPTCILMGQEKTGITEEALNLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|298707095|emb|CBJ29887.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 356
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 86 VTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHFGV 145
V + PF++STAFL+G+ G L + ++CDFFV++ Q L V SI LHHF
Sbjct: 214 VRRRPFRRSTAFLVGH-GNRLDHEALDVCDFFVHVEQASESPMELAAPVTTSIALHHFTA 272
Query: 146 WAGFSERTRDGNKYVVAERSARQ 168
WA + ER G K+ V +AR+
Sbjct: 273 WANYEERHFTGEKFNVDVEAARR 295
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
+Y+V+ N + ++N+GTL R AF V E+I+VG ++ G+HGS H+ +R F A
Sbjct: 15 AYLVLANPSSKNNLGTLIRCGAAFAVEEVIVVGAFKWSTHGAHGSHKHLRYRCFDDWETA 74
Query: 64 RVFLK-SKDCDICGV 77
FL+ K CD+CGV
Sbjct: 75 ATFLRDEKGCDLCGV 89
>gi|440233087|ref|YP_007346880.1| rRNA methylase [Serratia marcescens FGI94]
gi|440054792|gb|AGB84695.1| rRNA methylase [Serratia marcescens FGI94]
Length = 220
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S VN + ++ D
Sbjct: 11 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTARMRTLVSSAAGSNSWVNVKTHPTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +K + I ++D AVD + + T LLG E G++ + ++ D + IP
Sbjct: 71 AVQHMKGQGMQILATHLSDRAVDFRDIDYTRPTCILLGQEKTGITEEALQLADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|430822804|ref|ZP_19441379.1| RNA methyltransferase [Enterococcus faecium E0120]
gi|430865483|ref|ZP_19481118.1| RNA methyltransferase [Enterococcus faecium E1574]
gi|431739634|ref|ZP_19528554.1| RNA methyltransferase [Enterococcus faecium E2039]
gi|430442733|gb|ELA52754.1| RNA methyltransferase [Enterococcus faecium E0120]
gi|430552830|gb|ELA92547.1| RNA methyltransferase [Enterococcus faecium E1574]
gi|430604250|gb|ELB41741.1| RNA methyltransferase [Enterococcus faecium E2039]
Length = 254
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A AF ++ +L+G+ + + + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAG-VLLGKGTADIYSTKVLRSMQGSNYHLPVLQ-K 168
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D V
Sbjct: 169 DLTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNV 228
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFGV 145
YIP G SLNV VA+ IVL+HF +
Sbjct: 229 YIPMKGNA-ESLNVGVASGIVLYHFSL 254
>gi|238784018|ref|ZP_04628034.1| tRNA guanosine-2'-O-methyltransferase [Yersinia bercovieri ATCC
43970]
gi|238715126|gb|EEQ07122.1| tRNA guanosine-2'-O-methyltransferase [Yersinia bercovieri ATCC
43970]
Length = 230
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 18/219 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + S GS S V + ++D
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTEMYTRLSSAAGSNSWVQVKTHPHITD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 82 AIAHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDG----NKYVVAERSARQVRRSFCAEKP 178
G SLNV+VA++++L+ ++R R + + A Q R F P
Sbjct: 142 I-GMVQSLNVSVASALILYE-------AQRQRQNAGMYQRVLSVLPPAEQQRLLFEGGYP 193
Query: 179 ESIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ + ++R+ D G ++ A+ + E
Sbjct: 194 ---VLAQVAKRKGLPQPHIDEQGQIIADPQWWSAMQSTE 229
>gi|340759389|ref|ZP_08695961.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium varium
ATCC 27725]
gi|251835585|gb|EES64125.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium varium
ATCC 27725]
Length = 235
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFHSL 60
+++ I N G L RSA FGV +I+ R + S G+ +V+ ++
Sbjct: 91 LILDEIQDPRNFGALIRSAEVFGVKGIIIPERNAVRINETVVKTSTGAIEYVDIVKVTNI 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S+A + LK D + G E + + D ++ + TA +LG+EG G+ K E CD + I
Sbjct: 151 SEALLKLKKLDYWVYGAE-GEGSKDYSKEKYPSRTALVLGSEGNGIRKKVKENCDVLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P + G SLNV+VA I+L
Sbjct: 210 PMH-GKINSLNVSVAGGIILSEI 231
>gi|311745086|ref|ZP_07718871.1| RNA methylase, SpoU family [Algoriphagus sp. PR1]
gi|126577599|gb|EAZ81819.1| RNA methylase, SpoU family [Algoriphagus sp. PR1]
Length = 179
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+V+ NI +NVG+ R+ AF V +++L G RD + G+T V + H+
Sbjct: 27 LVLDNIRSLNNVGSAFRTGDAFRVEKIMLCGITGTPPHRDIQK-TALGATESVEWEHYPQ 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
DA LK + +C +E D ++ + Q K+ A + GNE G+ + E+CD
Sbjct: 86 TVDALKELKKQGYTLCALEQVDQSIFLQEYQPDPKEKIALVFGNEVFGVEDEVLELCDHV 145
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHFGV 145
+ IPQ G SLN++V I + H V
Sbjct: 146 LEIPQL-GTKHSLNISVTLGISVWHMMV 172
>gi|270265245|ref|ZP_06193507.1| hypothetical protein SOD_l00950 [Serratia odorifera 4Rx13]
gi|270040879|gb|EFA13981.1| hypothetical protein SOD_l00950 [Serratia odorifera 4Rx13]
Length = 231
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S VN + ++SD
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTSRMRTLVSSAAGSNSWVNVKTHRTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + + T LLG E G++ + + D + IP
Sbjct: 82 AVTHLKDQGMQILATHLSARAVDFREVDYTRPTCVLLGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|386824716|ref|ZP_10111846.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica PRI-2C]
gi|386378393|gb|EIJ19200.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica PRI-2C]
Length = 231
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S VN + ++SD
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTSRMRTLVSSAAGSNSWVNVKTHRTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + + T LLG E G++ + + D + IP
Sbjct: 82 AVTHLKDQGMQILATHLSTRAVDFREVDYTRPTCVLLGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|257867720|ref|ZP_05647373.1| RNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257874047|ref|ZP_05653700.1| RNA methyltransferase [Enterococcus casseliflavus EC10]
gi|257876625|ref|ZP_05656278.1| RNA methyltransferase [Enterococcus casseliflavus EC20]
gi|257801803|gb|EEV30706.1| RNA methyltransferase [Enterococcus casseliflavus EC30]
gi|257808211|gb|EEV37033.1| RNA methyltransferase [Enterococcus casseliflavus EC10]
gi|257810791|gb|EEV39611.1| RNA methyltransferase [Enterococcus casseliflavus EC20]
Length = 259
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+++++ N+ NVGT+ R+A A G S + L G D + S N+ H +
Sbjct: 115 NWLILDNVQDPGNVGTMIRTADAAGFSGVFLGEGTADLYSTKVLRSMQGSNY-HLPIVEG 173
Query: 63 A-RVFLK---SKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
A FLK + I G E+ AV T+ P ++ AF+LGNEG G++ + + D +
Sbjct: 174 AIPPFLKQLQAAGVAIYGTELNKEAVPYTELPKGQAAAFILGNEGQGVNQELLALTDKNL 233
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
YIP YG SLNV +AA I+++
Sbjct: 234 YIPIYGQAE-SLNVAIAAGILMY 255
>gi|401678142|ref|ZP_10810110.1| rRNA methylase [Enterobacter sp. SST3]
gi|400214510|gb|EJO45428.1| rRNA methylase [Enterobacter sp. SST3]
Length = 218
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAF-GSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + G R + GS S V+ + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGHRMRTMVSAAAGSNSWVSVKSHQTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + + T L+G E G+S + ++ D + IP
Sbjct: 71 AVSHLKGRGMQILATNLSAKAVDFREIDYTRPTCILMGQEKTGISQEALDLADRDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|238750786|ref|ZP_04612284.1| tRNA guanosine-2'-O-methyltransferase [Yersinia rohdei ATCC 43380]
gi|238710930|gb|EEQ03150.1| tRNA guanosine-2'-O-methyltransferase [Yersinia rohdei ATCC 43380]
Length = 230
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + S GS S V + ++D
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPTTEMYTRLSSAAGSNSWVQVKTHAHITD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +LKS+ I ++D AVD + + T L+G E G+S + + D + IP
Sbjct: 82 AITYLKSQGMQILATHLSDKAVDFREIDYTLPTCILMGQEKTGISEEALALADKDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|421786260|ref|ZP_16222669.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica A30]
gi|407751606|gb|EKF61780.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica A30]
Length = 220
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S VN + ++SD
Sbjct: 11 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTSRMRTLVSSAAGSNSWVNVKTHRTISD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + + T LLG E G++ + + D + IP
Sbjct: 71 AVTHLKDQGMQILATHLSARAVDFREVDYTRPTCVLLGQEKTGITEEALALADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|365847299|ref|ZP_09387788.1| RNA methyltransferase, TrmH family [Yokenella regensburgei ATCC
43003]
gi|364572553|gb|EHM50093.1| RNA methyltransferase, TrmH family [Yokenella regensburgei ATCC
43003]
Length = 218
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRR-DFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G R A + GS S V+ + ++ D
Sbjct: 11 VCMEQVHKPHNVSAIIRTADAVGVHEVHAIWPGNRMRTMASSAAGSNSWVSVKTHRNIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 71 AVTHLKGCGMQVLATHLSDTAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|343928549|ref|ZP_08767996.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433]
gi|343761560|dbj|GAA14922.1| putative RNA methyltransferase [Gordonia alkanivorans NBRC 16433]
Length = 228
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H ++ D
Sbjct: 80 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLMHHDTVGDLL 139
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T + + + L G EG G+S D V I Q+
Sbjct: 140 DWARGEGLSVVAVDNTPGSRPLETVELPRECVLLFGQEGPGVSDDAQRQADMTVSIAQF- 198
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 199 GSTRSINAGVAAGIAMHAW 217
>gi|406885870|gb|EKD32983.1| SpoU rRNA methylase family protein [uncultured bacterium]
Length = 161
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
V+ HNI HNVG++ RS+ FGV ++ L G RR+ N + G+ V + +
Sbjct: 13 VLAHNIRSMHNVGSIFRSSECFGVEKIYLTGYTACPPRREINKV-ALGAEDIVRWEYSQE 71
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ + LK +I +E T ++V ++ F A +LGNE G+ + D +
Sbjct: 72 MLPLILELKKSGYEIVALETTKDSVSISDAAFSGRVALILGNEVNGIETDILALSDKVAH 131
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
I + G +SLNV+VAA I ++
Sbjct: 132 I-EMKGKKSSLNVSVAAGIAMYAL 154
>gi|336324850|ref|YP_004604816.1| putative rRNA methylase [Corynebacterium resistens DSM 45100]
gi|336100832|gb|AEI08652.1| putative rRNA methylase [Corynebacterium resistens DSM 45100]
Length = 224
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H +++D
Sbjct: 76 HIAIENFENDSNIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLEHHPTVADVL 135
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + D + V+ T +V + K L G EG G++ + V I Q+
Sbjct: 136 EYARKHDLTVVAVDNTPGSVPLETADLPKRCLLLFGQEGPGVTPEAQAGATQTVSIAQF- 194
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 195 GSTRSINAGVAAGIAMHAW 213
>gi|424766335|ref|ZP_18193688.1| RNA methyltransferase, TrmH family [Enterococcus faecium TX1337RF]
gi|402411074|gb|EJV43454.1| RNA methyltransferase, TrmH family [Enterococcus faecium TX1337RF]
Length = 254
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILV-GRRDFNAF----GSHGSTSHVNFRHFHS 59
++++ N+ NVGT+ R+A AF ++ ++L G D + GS H+
Sbjct: 111 WLLLDNVQDPGNVGTMIRTADAFDMAGVLLSKGTADIYSTKVLRSMQGSNYHLPVLQ-KD 169
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L++ +K K + G E+ + A + + + A ++GNEG G+S + + D VY
Sbjct: 170 LTEVIPLMKDKGFTVYGTELNEEAHALDKVEKSDNFAIIMGNEGQGVSQEILSLTDQNVY 229
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGV 145
IP G SLNV VAA IVL+HF +
Sbjct: 230 IPMKGNA-ESLNVGVAAGIVLYHFSL 254
>gi|255536513|ref|YP_003096884.1| RNA methylase, SpoU family [Flavobacteriaceae bacterium 3519-10]
gi|255342709|gb|ACU08822.1| RNA methylase, SpoU family [Flavobacteriaceae bacterium 3519-10]
Length = 197
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 10/146 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
VV+ N+ HNVG + R+A AF + +++L G R+ + + G+T V + + +
Sbjct: 49 VVLDNVRSMHNVGAIFRTADAFLIEKVVLCGITPQPPHREIHK-AALGATESVEWIYVDT 107
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEICDFF 117
+S A LK ++ + G+E T N+ + + K A +LGNE GLS + D F
Sbjct: 108 VSAALETLKKENYTVIGIEQTSNSQKIGDYHISKDQKYAVVLGNEVDGLSEDALALYDAF 167
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ G SLNV+V IV+ F
Sbjct: 168 LEIPQL-GTKHSLNVSVCGGIVMWEF 192
>gi|322835058|ref|YP_004215085.1| tRNA guanosine-2'-O-methyltransferase [Rahnella sp. Y9602]
gi|384260280|ref|YP_005404214.1| tRNA guanosine-2'-O-methyltransferase [Rahnella aquatilis HX2]
gi|321170259|gb|ADW75958.1| tRNA guanosine-2'-O-methyltransferase [Rahnella sp. Y9602]
gi|380756256|gb|AFE60647.1| tRNA guanosine-2'-O-methyltransferase [Rahnella aquatilis HX2]
Length = 232
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEIHAVWPTTRMKTLVSSAAGSNSWVQVKTHKTIQD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +K+K I +++ AVD + + T LLG E G++ + + D + IP
Sbjct: 82 AVAKMKAKGMQILATNLSEKAVDFRAIDYTRPTCILLGQEKTGITPEALALADSDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|238759850|ref|ZP_04621006.1| tRNA guanosine-2'-O-methyltransferase [Yersinia aldovae ATCC 35236]
gi|238701911|gb|EEP94472.1| tRNA guanosine-2'-O-methyltransferase [Yersinia aldovae ATCC 35236]
Length = 230
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 16/218 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + + S GS S V + ++
Sbjct: 22 VCLEEVHKPHNVSAIIRTADAVGIHQVHAIWPTTQMYTRLSSAAGSNSWVQVKTHTHIAG 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+D I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 82 AIAHLKSQDMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLHHFGVW---AGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
G SLNV+VA++++L+ AG +RT+ V++E Q R F P
Sbjct: 142 I-GMVQSLNVSVASALILYEAQRQRQNAGMYQRTQS----VLSEN--EQQRLLFEGGYP- 193
Query: 180 SIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ ++R+ + D G ++ + A+ + E
Sbjct: 194 --VLAHVAKRKGLAQPHIDEQGQVIADAQWWSAMQSTE 229
>gi|333929778|ref|YP_004503357.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. AS12]
gi|333934731|ref|YP_004508309.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica AS9]
gi|386331601|ref|YP_006027771.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. AS13]
gi|333476338|gb|AEF48048.1| tRNA guanosine-2'-O-methyltransferase [Serratia plymuthica AS9]
gi|333493838|gb|AEF53000.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. AS12]
gi|333963934|gb|AEG30707.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. AS13]
Length = 231
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S VN + ++SD
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTSRMRTLVSSAAGSNSWVNVKTHRTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + + T LLG E G++ + + D + IP
Sbjct: 82 AVTHLKDQGMQILATHLSARAVDFREVDYTRPTCVLLGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|167039502|ref|YP_001662487.1| RNA methyltransferase [Thermoanaerobacter sp. X514]
gi|300915248|ref|ZP_07132563.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter sp.
X561]
gi|307725172|ref|YP_003904923.1| TrmH family RNA methyltransferase [Thermoanaerobacter sp. X513]
gi|166853742|gb|ABY92151.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter sp.
X514]
gi|300888972|gb|EFK84119.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter sp.
X561]
gi|307582233|gb|ADN55632.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter sp.
X513]
Length = 247
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + RSA AFGV +I+ RR S G+ H+ ++
Sbjct: 99 LILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNI 158
Query: 61 SDARVFLKSKDCDICGVEI-TDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
++ LK + I G ++ + + + + F AF++GNEG G+S + CDF V
Sbjct: 159 NNTIRDLKERGLWIVGTDVNAEKSFEELNYDF--PVAFVIGNEGKGVSKLVLQNCDFVVK 216
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAASI+++
Sbjct: 217 IPM-KGKINSLNASVAASILIYQ 238
>gi|333395919|ref|ZP_08477736.1| putative tRNA/rRNA methyltransferase [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
Length = 251
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH----- 58
S++++ + N+GT+ R+A A G++ ++L G + F + S + HFH
Sbjct: 107 SWLLLDGVQDPGNIGTMVRTADAAGLTGVVL-GEGSADLFSAKVLRS-MQGSHFHIPIYQ 164
Query: 59 -SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
L+D LK+ + G E+ AVD Q P + + A ++GNEG G+ A+ D
Sbjct: 165 GDLADWVTELKAAQVPVYGSELNPAAVDFHQIPAQPNFALIMGNEGNGMQAELLAQTDQN 224
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIP G SLNV +AA I+L
Sbjct: 225 LYIP-IQGRAESLNVAIAAGILLFQL 249
>gi|365875733|ref|ZP_09415259.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis Ag1]
gi|442587402|ref|ZP_21006219.1| hypothetical protein D505_06218 [Elizabethkingia anophelis R26]
gi|365756578|gb|EHM98491.1| tRNA/rRNA methyltransferase (spou) [Elizabethkingia anophelis Ag1]
gi|442562843|gb|ELR80061.1| hypothetical protein D505_06218 [Elizabethkingia anophelis R26]
Length = 176
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 10/150 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFR 55
I V++ +I +NVG + R+A AF + +++L G R+ + + G+T V++
Sbjct: 24 IPVIVLLDSIRSMNNVGAVFRTADAFIIEKVVLCGITPQPPHREIHK-AALGATESVDWN 82
Query: 56 HFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAF--LLGNEGMGLSAKECEI 113
+ ++DA LKS+ I +E T ++ + + K + ++GNE G+S + +
Sbjct: 83 YEKDVTDALQKLKSEGYKILAIEQTTGSIALNEQVISKDEKYVVIMGNEVDGVSDEALAL 142
Query: 114 CDFFVYIPQYGGGTASLNVTVAASIVLHHF 143
CD F+ IPQ G SLNV+V A I++ F
Sbjct: 143 CDGFIEIPQL-GTKHSLNVSVCAGIIMWEF 171
>gi|381163698|ref|ZP_09872928.1| rRNA methylase [Saccharomonospora azurea NA-128]
gi|379255603|gb|EHY89529.1| rRNA methylase [Saccharomonospora azurea NA-128]
Length = 231
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + +VG++ +N G+ + + + H +S
Sbjct: 83 HVAIENFQHDHNIGTVVRTANAFAAKAVHIVGKKRWNRRGAMVTDRYQHLHHHAEVSGLV 142
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ T A + + L G EG GLS F V I Q+
Sbjct: 143 EFATEHGLAVVAVDNTPGAQPIETVRLPRECVLLFGQEGPGLSEDAQRAASFVVSIAQF- 201
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 202 GTTRSINAGVAAGIVMHAW 220
>gi|420146657|ref|ZP_14654049.1| Putative tRNA/rRNA methyltransferase [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398401034|gb|EJN54543.1| Putative tRNA/rRNA methyltransferase [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 251
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH----- 58
S++++ + N+GT+ R+A A G++ ++L G + F + S + HFH
Sbjct: 107 SWLLLDGVQDPGNIGTMVRTADAAGLTGVVL-GEGSADLFSAKVLRS-MQGSHFHIPIYQ 164
Query: 59 -SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
L+D LK+ + G E+ AVD Q P + + A ++GNEG G+ A+ D
Sbjct: 165 GDLADWVTELKAAQVPVYGSELNPAAVDFHQIPAQPNFALIMGNEGNGMQAELLAQTDQN 224
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIP G SLNV +AA I+L
Sbjct: 225 LYIP-IQGRAESLNVAIAAGILLFQL 249
>gi|378549397|ref|ZP_09824613.1| hypothetical protein CCH26_04892 [Citricoccus sp. CH26A]
Length = 237
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF + + ++GRR +N G+ + +++ H ++ D
Sbjct: 92 HVAIENWQHDLNIGTVVRTANAFNAAGVHIIGRRRWNRRGAMVTDRYLHVHHHPTVEDFI 151
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +S++ + G++I ++V + + + + G EG GLS + + + I Q+
Sbjct: 152 GWARSEELTVLGIDIFPDSVPLETYRLPERCVLVFGQEGPGLSEEVHRAAEATLSIAQF- 210
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 211 GSTRSINAGVAAGIAMHAW 229
>gi|238797645|ref|ZP_04641141.1| tRNA guanosine-2'-O-methyltransferase [Yersinia mollaretii ATCC
43969]
gi|238718509|gb|EEQ10329.1| tRNA guanosine-2'-O-methyltransferase [Yersinia mollaretii ATCC
43969]
Length = 233
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAF-GSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + + GS S V + ++D
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGIHQVHAIWPSTEMYTRLSAAAGSNSWVQVKTHPHITD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 82 AIAHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|336391293|ref|ZP_08572692.1| putative tRNA/rRNA methyltransferase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 251
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH----- 58
S++++ + N+GT+ R+A A G++ ++L G + F + S + HFH
Sbjct: 107 SWLLLDGVQDPGNIGTMVRTADAAGLTGVVL-GEGSADLFSAKVLRS-MQGSHFHIPIYQ 164
Query: 59 -SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
L+D LK+ + G E+ AVD Q P + + A ++GNEG G+ A+ D
Sbjct: 165 GDLADWVTELKAAQVPVYGSELNPAAVDFHQIPAQPNFALIMGNEGNGMQAELLAQTDQN 224
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIP G SLNV +AA I+L
Sbjct: 225 LYIP-IQGRAESLNVAIAAGILLFQL 249
>gi|167036782|ref|YP_001664360.1| RNA methyltransferase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115204|ref|YP_004185363.1| TrmH family RNA methyltransferase [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166855616|gb|ABY94024.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928295|gb|ADV78980.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
brockii subsp. finnii Ako-1]
Length = 247
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + RSA AFGV +I+ RR S G+ H+ ++
Sbjct: 99 LILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNI 158
Query: 61 SDARVFLKSKDCDICGVEI-TDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
++ LK + I G ++ + + + + F AF++GNEG G+S + CDF V
Sbjct: 159 NNTIRDLKERGLWIVGTDVNAEKSFEELNYDF--PVAFVIGNEGKGVSKLVLQNCDFVVK 216
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAASI+++
Sbjct: 217 IPM-KGKINSLNASVAASILIYQ 238
>gi|289705731|ref|ZP_06502115.1| RNA methyltransferase, TrmH family [Micrococcus luteus SK58]
gi|289557571|gb|EFD50878.1| RNA methyltransferase, TrmH family [Micrococcus luteus SK58]
Length = 256
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF + + ++GRR +N G+ + +++ H ++
Sbjct: 94 HVAIENWQHDLNIGTVVRTANAFNAAGVHIIGRRRWNRRGAMVTDRYLHVHHHETVEAFT 153
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + GV++ +V V F ++ + G EG GLSA+ + I QY
Sbjct: 154 EWAAGEGLPVLGVDLFPESVPVETFDFPRACVLVFGQEGPGLSAEVRAASSAVLSIAQY- 212
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 213 GSTRSINAGVAAGIAMHAW 231
>gi|289551668|ref|YP_003472572.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus
lugdunensis HKU09-01]
gi|315659128|ref|ZP_07911993.1| RNA methyltransferase [Staphylococcus lugdunensis M23590]
gi|385785215|ref|YP_005761388.1| SpoU rRNA methylase family protein [Staphylococcus lugdunensis
N920143]
gi|418415995|ref|ZP_12989198.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|418637342|ref|ZP_13199667.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
lugdunensis VCU139]
gi|289181199|gb|ADC88444.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus
lugdunensis HKU09-01]
gi|315495852|gb|EFU84182.1| RNA methyltransferase [Staphylococcus lugdunensis M23590]
gi|339895471|emb|CCB54799.1| SpoU rRNA methylase family protein [Staphylococcus lugdunensis
N920143]
gi|374839482|gb|EHS02996.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
lugdunensis VCU139]
gi|410873853|gb|EKS21787.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 248
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ H+
Sbjct: 94 LSTVIILDGLEDPHNLGSILRTADATGVDGIIIPKRRSVALTQIVAKASTGAIQHIPVMR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+LS LK+ I G E DNA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLSQTIDDLKAHGFWIVGTE-ADNATDYRDMAADMSLAIVIGSEGQGMSRLVKDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAA ++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAAGLMMY 236
>gi|373253210|ref|ZP_09541328.1| rRNA methylase [Nesterenkonia sp. F]
Length = 214
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ ++GRR +N G+ + + + RH ++ +
Sbjct: 69 HVAIENWQHDFNIGTVVRTANAFLAAEVHIIGRRRWNRRGAMVTDRYQHIRHHATVEEFV 128
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ D+ GV++ ++ + + + + G EG GLS + + + I Q+
Sbjct: 129 AWAAESGLDVLGVDLFPDSAPIETYAMPRDCVLVFGQEGPGLSEEVRQTATATLSIAQF- 187
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA I +H +
Sbjct: 188 GSTRSINAGTAAGIAMHSW 206
>gi|189346688|ref|YP_001943217.1| tRNA/rRNA methyltransferase SpoU [Chlorobium limicola DSM 245]
gi|189340835|gb|ACD90238.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobium limicola DSM 245]
Length = 179
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFH 58
Y+++HNI NVG++ R+A A G+ +IL G R++ + + G+ V + +
Sbjct: 28 YLMLHNIRSMWNVGSMFRTADAAGIERIILTGYTATPPRKEIDK-TALGAQDVVKWEYSA 86
Query: 59 SLSDARVFLKSKDCDICGVEITDNA---VDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
DA LK++ ICG+EI +N+ + + F ++GNE G+ + CD
Sbjct: 87 DPLDAIDRLKAEGVRICGLEIAENSRLYTAIVKEEF--PICLVVGNEVDGIDDEVLSCCD 144
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQY G SLNV VAA + L
Sbjct: 145 SVLEIPQY-GVKHSLNVAVAAGVALFEL 171
>gi|441515271|ref|ZP_20997076.1| putative RNA methyltransferase [Gordonia amicalis NBRC 100051]
gi|441449933|dbj|GAC55037.1| putative RNA methyltransferase [Gordonia amicalis NBRC 100051]
Length = 228
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H ++ D
Sbjct: 80 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLMHHDTVGDLI 139
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T + + + L G EG G+S D V I Q+
Sbjct: 140 DWARGEGLAVVAVDNTPGSQPLETVELPRECVLLFGQEGPGVSDDAQRQADMTVSIAQF- 198
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 199 GSTRSINAGVAAGIAMHAW 217
>gi|227113296|ref|ZP_03826952.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 230
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HNV + R+A A GV E+ + R + GS S V + ++ D
Sbjct: 22 ICMEQVHKPHNVSAVIRTADAVGVHEVHAIWPTSRMKTLVSSAAGSNSWVQVKTHRNIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++++AVD + + + T LLG E G++A+ ++ D + IP
Sbjct: 82 AVGHLKAEGMQVLATHLSEHAVDFREIDYTRPTCILLGQEKTGITAEALKLADRDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSA----RQVRRSFCAEKP 178
G SLNV+VA++++L+ ++R R E S Q R F P
Sbjct: 141 MTGMVQSLNVSVASALILYE-------AQRQRQIAGMYQREDSPLDEEEQQRLLFEGGYP 193
Query: 179 ESIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ R ++R+ + D G V+ + A+ + E
Sbjct: 194 ---VLARVAKRKGLPRPYIDHQGQIVADTPWWAAMQSSE 229
>gi|409390427|ref|ZP_11242168.1| putative RNA methyltransferase [Gordonia rubripertincta NBRC
101908]
gi|403199695|dbj|GAB85402.1| putative RNA methyltransferase [Gordonia rubripertincta NBRC
101908]
Length = 228
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H ++ D
Sbjct: 80 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLMHHDTVGDLL 139
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T + + + L G EG G+S D V I Q+
Sbjct: 140 DWARGEGLSVVAVDNTPGSRPLETVELPRECVLLFGQEGPGVSDDAQRQADMTVSIAQF- 198
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 199 GSTRSINAGVAAGIAMHAW 217
>gi|404260071|ref|ZP_10963371.1| putative RNA methyltransferase [Gordonia namibiensis NBRC 108229]
gi|403401425|dbj|GAC01781.1| putative RNA methyltransferase [Gordonia namibiensis NBRC 108229]
Length = 228
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF V+ + +VGRR +N G+ + + + H ++ D
Sbjct: 80 HVAIENFAHDANIGTVVRTANAFAVAAVHIVGRRRWNRRGAMVTDRYQHLMHHETVGDLI 139
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T + + + L G EG G+S D V I Q+
Sbjct: 140 DWAREEGLAVVAVDNTPGSRPLETVELPRECVLLFGQEGPGVSDDAQRQADMTVSIAQF- 198
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 199 GSTRSINAGVAAGIAMHAW 217
>gi|392380677|ref|YP_005029873.1| putative tRNA/rRNA methyltransferase [Azospirillum brasilense
Sp245]
gi|356875641|emb|CCC96385.1| putative tRNA/rRNA methyltransferase [Azospirillum brasilense
Sp245]
Length = 194
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRR----DFNAFGSHGSTSHVNFRHFHSLSDA 63
V I+K NVG L RSA AFG S + + + + G+ H+ + ++D
Sbjct: 9 VERISKPGNVGNLMRSAHAFGASFFFAIDPEPDLHEAHIVDTSGAAEHLPLYVYDRVADL 68
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
+ KDC + GVE+T++AV++ A++LG E LS E CDF V IP
Sbjct: 69 AL---PKDCQLVGVELTEDAVELPSFRHPTRAAYVLGPERGSLSEPLLERCDFTVKIPM- 124
Query: 124 GGGTASLNVTVAASIVLHHFGVWAG-FSERT 153
+NV VA ++V++ + G F+ER
Sbjct: 125 ---KFCINVGVAGALVMYDRMISLGRFAERP 152
>gi|308176006|ref|YP_003915412.1| RNA methyltransferase [Arthrobacter arilaitensis Re117]
gi|307743469|emb|CBT74441.1| putative RNA methyltransferase [Arthrobacter arilaitensis Re117]
Length = 218
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ RSA AF E+ ++GRR +N G+ + + + RH ++ +
Sbjct: 70 HIAIENWQHDMNIGTVVRSANAFLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHATVEEFV 129
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + I G++I ++V + + K+ + G EG GLS + + I Q+
Sbjct: 130 AWAQEAGLTILGIDIFPDSVPLETYDLPKNCVLVFGQEGPGLSPEVHAAAKDTLSIEQF- 188
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA I +H +
Sbjct: 189 GSTRSINAASAAGIAMHAW 207
>gi|425074280|ref|ZP_18477383.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425084916|ref|ZP_18488009.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405595745|gb|EKB69115.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405608331|gb|EKB81282.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 229
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + +++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAVWPSSRMRTMASAAAGSNSWVQVKTHRTIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
LK + I ++D A+D + + + T L+G E G++ + + D + IP
Sbjct: 82 TVGHLKGQGMQILATHLSDKAIDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|296138241|ref|YP_003645484.1| tRNA/rRNA methyltransferase SpoU [Tsukamurella paurometabola DSM
20162]
gi|296026375|gb|ADG77145.1| tRNA/rRNA methyltransferase (SpoU) [Tsukamurella paurometabola DSM
20162]
Length = 232
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V + N+ N+GT+ R+A AFG + +VGRR +N G+ + + + +H
Sbjct: 85 VAIENLGHDANIGTVVRTANAFGARTVHIVGRRRWNRRGAMVTDRYQHVQHHPDAESFAA 144
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ D I V+ +V + + + L G EG G+S + V I Q+ G
Sbjct: 145 WCAEHDLPIVAVDNQPGSVPLERGSLPRRCVLLFGQEGPGVSGDARRVAGTTVSIAQF-G 203
Query: 126 GTASLNVTVAASIVLHHF 143
T S+NV VAA I +H +
Sbjct: 204 STRSINVGVAAGIAMHAW 221
>gi|314937163|ref|ZP_07844510.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus hominis
subsp. hominis C80]
gi|313655782|gb|EFS19527.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus hominis
subsp. hominis C80]
Length = 249
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +++ RR A S G+ HV
Sbjct: 94 LSTIIILDGLEDPHNLGSIIRTADASGVDGIVIPKRRSVALTQTVAKASTGAIQHVPVMR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+LS LK + G E DNA D A ++G+EG G+S + CDF
Sbjct: 154 VTNLSKIIDELKDNGYWVAGAE-ADNATDYRNMAADMPLAIVIGSEGQGMSRLVKDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMYEV 238
>gi|170780953|ref|YP_001709285.1| tRNA/rRNA methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155521|emb|CAQ00633.1| tRNA/rRNA methyltransferase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 218
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ RSA AF + +VGRR +N G+ + + + H +++D
Sbjct: 73 HVAIENWQHDMNIGSIVRSANAFAADTVHIVGRRRWNKRGAMVTDRYQHVVHHATIADLV 132
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + I ++ D +V + + + G EG GLS + D V I Q+
Sbjct: 133 EWARGEGLPIIAIDNVDGSVLLETTRLPERCVLVFGQEGPGLSDEAVAAADMTVAISQF- 191
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N + AA++V+H +
Sbjct: 192 GSTRSINASAAAAVVMHAW 210
>gi|323358259|ref|YP_004224655.1| rRNA methylase [Microbacterium testaceum StLB037]
gi|323274630|dbj|BAJ74775.1| rRNA methylase [Microbacterium testaceum StLB037]
Length = 227
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ RSA AF +E+ ++G+R +N G+ + + + RH +
Sbjct: 85 HVAIENWQHDLNIGSIVRSANAFLAAEVHIIGKRRWNRRGAMVTDRYQHVRHHEDVETFT 144
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + ++ + +V V + ++ L G EG GLS + V I QY
Sbjct: 145 AWARGSGLPVIAIDNVEGSVPVNRAELPEACVLLFGQEGPGLSPEALAAASAVVEITQY- 203
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA++V++ +
Sbjct: 204 GSTRSINAASAAAVVMYEW 222
>gi|188025415|ref|ZP_02958530.2| hypothetical protein PROSTU_00272 [Providencia stuartii ATCC 25827]
gi|188023696|gb|EDU61736.1| RNA methyltransferase, TrmH family [Providencia stuartii ATCC
25827]
Length = 226
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HNV + RSA A G+ + + + + + GS S VN S
Sbjct: 11 ICLEEVHKPHNVSAIVRSADAVGIHTIHAIWPDQQVKLSVSSAAGSNSWVNVISHPSTEA 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS++ + +++ AVD + + + T ++G E G+SAK E+ D + IP
Sbjct: 71 AISQLKSQNMQVLVTHLSEQAVDFREIDYTQPTCIMVGQEKKGISAKALELADKHIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 V-GMVQSLNVSVASALILY 148
>gi|228475266|ref|ZP_04059991.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus hominis
SK119]
gi|418619647|ref|ZP_13182470.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus hominis
VCU122]
gi|228270731|gb|EEK12140.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus hominis
SK119]
gi|374824213|gb|EHR88184.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus hominis
VCU122]
Length = 249
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +++ RR A S G+ HV
Sbjct: 94 LSTIIILDGLEDPHNLGSIIRTADASGVDGVVIPKRRSVALTQTVAKASTGAIQHVPVMR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+LS LK + G E DNA D A ++G+EG G+S + CDF
Sbjct: 154 VTNLSKIIDELKDNGYWVAGAE-ADNATDYRNMAADMPLAIVIGSEGQGMSRLVKDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMYEV 238
>gi|410865376|ref|YP_006979987.1| RNA methyltransferase, TrmH family [Propionibacterium
acidipropionici ATCC 4875]
gi|410822017|gb|AFV88632.1| RNA methyltransferase, TrmH family [Propionibacterium
acidipropionici ATCC 4875]
Length = 249
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF V+ + ++GRR +N G+ + +++ H ++ +
Sbjct: 105 HVAIQNWEHDFNIGSVVRTANAFNVAGVHILGRRRWNRRGAMVTDRYLHVHHHETVGEFL 164
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+L ++ GV+ +V + + + G+EG GL+ + C V I QY
Sbjct: 165 AWLDARQVVPIGVDNLPGSVPLETAELPRDCCLVFGSEGSGLTDEVVAGCRQLVAITQY- 223
Query: 125 GGTASLNVTVAASIVLHHFGV-WA 147
G T S+N A++I ++H+ + WA
Sbjct: 224 GSTRSINAGAASAIAMYHWALQWA 247
>gi|375293908|ref|YP_005128448.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae INCA 402]
gi|376285594|ref|YP_005158804.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae 31A]
gi|371579109|gb|AEX42777.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae 31A]
gi|371583580|gb|AEX47246.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae INCA 402]
Length = 222
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K +D I ++ T V + + L G EG G++ + + I Q+
Sbjct: 134 AWAKQQDLTIVAIDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDNARMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|213965150|ref|ZP_03393348.1| spou rrna methylase family protein [Corynebacterium amycolatum
SK46]
gi|213952264|gb|EEB63648.1| spou rrna methylase family protein [Corynebacterium amycolatum
SK46]
Length = 223
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H ++S+
Sbjct: 75 HIAIENFENDSNIGTVVRTANAFLVEAVHIVGRKRWNRRGAMVTDRYQHLLHHETVSEVI 134
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + D + V+ +V + + L G EG G++ + D V I Q+
Sbjct: 135 SWAREHDLAVVAVDNVPGSVPIETVELPERCLLLFGQEGPGVTEEAQRAADLTVSIAQF- 193
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 194 GSTRSINAGVAAGIAMHSW 212
>gi|444376912|ref|ZP_21176150.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Enterovibrio sp. AK16]
gi|443679037|gb|ELT85699.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Enterovibrio sp. AK16]
Length = 207
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAFG--SHGSTSHVNFRHFHSLSDA 63
+ + K +N+ + R+A A GV ++ V +D A G S G+ + V+ + +A
Sbjct: 1 MEEVHKPNNISAIIRTADAVGVHQVHAVWPKDSKMRALGGTSAGARNWVDVVTHDNTPEA 60
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK+K I ++D AVD + + K TA ++G E G+S + E+ D + IP
Sbjct: 61 FETLKAKGMQILVTNLSDTAVDFREIDYTKPTAIVMGQEKTGISKQALELADQDIIIPMI 120
Query: 124 GGGTASLNVTVAASIVLHHFGVW---AGFSERTR 154
G SLNV+VA++++L+ AG +RTR
Sbjct: 121 -GMVQSLNVSVASALILYEAQRQRQNAGMYQRTR 153
>gi|403508582|ref|YP_006640220.1| spoU rRNA Methylase family protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402799121|gb|AFR06531.1| spoU rRNA Methylase family protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 206
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V V N + N+G++ R+A AFG S + +VG+R +N G+ + + + H
Sbjct: 53 HVAVENWSHDFNIGSVVRTANAFGCSAVHIVGKRRWNRRGAMVTDRYQHVHHHPDTGSLV 112
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +D + GV+ AV + +P ++ + G EG GLS + E+C + I Q+
Sbjct: 113 AWATERDLVLIGVDNLPGAVPLETYPLPRNAVLVFGQEGPGLSEEVREVCAAVLSIAQF- 171
Query: 125 GGTASLN 131
G T S+N
Sbjct: 172 GSTRSIN 178
>gi|70727476|ref|YP_254392.1| hypothetical protein SH2477 [Staphylococcus haemolyticus JCSC1435]
gi|90110723|sp|Q4L3J1.1|TRMHL_STAHJ RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|68448202|dbj|BAE05786.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 249
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + V++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVVILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E DNA D A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKEHGYWVAGAE-ADNATDYRDMAADMPLAIVIGSEGQGMSRLVKDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|395234030|ref|ZP_10412261.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter sp. Ag1]
gi|394731396|gb|EJF31177.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter sp. Ag1]
Length = 229
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + ++ +
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASSAAGSNSWVQVKTHKTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS I ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVRQLKSGGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|238764307|ref|ZP_04625258.1| tRNA guanosine-2'-O-methyltransferase [Yersinia kristensenii ATCC
33638]
gi|238697458|gb|EEP90224.1| tRNA guanosine-2'-O-methyltransferase [Yersinia kristensenii ATCC
33638]
Length = 231
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + S GS S V + +++
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGIHQIHAIWPTPEMYTRLSSAAGSNSWVQVKTHSDITE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 82 AITHLKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISKEALAMADKDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|440285574|ref|YP_007338339.1| rRNA methylase [Enterobacteriaceae bacterium strain FGI 57]
gi|440045096|gb|AGB76154.1| rRNA methylase [Enterobacteriaceae bacterium strain FGI 57]
Length = 229
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V+ + ++ +
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGSRMRTMASTAAGSNSWVSVKTHPTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++D AVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVSHLKGRGMQVLATNLSDKAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|320539303|ref|ZP_08038973.1| putative tRNA mG18-2'-O-methyltransferase, SAM-dependen [Serratia
symbiotica str. Tucson]
gi|320030695|gb|EFW12704.1| putative tRNA mG18-2'-O-methyltransferase, SAM-dependen [Serratia
symbiotica str. Tucson]
Length = 231
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS + VN + H++SD
Sbjct: 22 VCLEQVLKPHNVSAIIRTADAVGVHQVHAVWPTTRMRTLVSSAAGSNNWVNVKTHHTISD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
LK++ + ++ AVD + + + T LLG E G++ + + D + IP
Sbjct: 82 TVNHLKTQGMQVLATHLSSRAVDFREVDYTRPTCVLLGQEKTGMTDEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|338813991|ref|ZP_08626050.1| tRNA/rRNA methyltransferase [Acetonema longum DSM 6540]
gi|337274016|gb|EGO62594.1| tRNA/rRNA methyltransferase [Acetonema longum DSM 6540]
Length = 250
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
++++ + HN+G + R+A A G +++ RR G S G+ HV +
Sbjct: 101 FILLDELEDPHNLGAILRTADAAGAHGVLIPKRRSCPLSGTVAKTSAGAIEHVPVARIGN 160
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
++ LK C I G ++ + + Q ++GNEG GLS E CDF V
Sbjct: 161 VAQTIKELKKMGCWIVGADMAGSQ-NYYQADLTGPIVVVIGNEGQGLSRLTKETCDFLVK 219
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G ASLN +VA S++L+
Sbjct: 220 IPMK-GKIASLNASVACSLILYEV 242
>gi|242241345|ref|YP_002989526.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech703]
gi|242133402|gb|ACS87704.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech703]
Length = 230
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S V + S+ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPTNRMKTLVSTAAGSNSWVQVKTHRSIHD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ + ++ +AVD + + T LLG E G+SA+ + D + IP
Sbjct: 82 AVSHLKSQGMQVLATNLSASAVDFRDVDYTRPTCILLGQEKTGISAEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|386743180|ref|YP_006216359.1| tRNA guanosine-2'-O-methyltransferase [Providencia stuartii MRSN
2154]
gi|384479873|gb|AFH93668.1| tRNA guanosine-2'-O-methyltransferase [Providencia stuartii MRSN
2154]
Length = 237
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HNV + RSA A G+ + + + + + GS S VN S
Sbjct: 22 ICLEEVHKPHNVSAIVRSADAVGIHTIHAIWPDQQVKLSVSSAAGSNSWVNVISHPSTEA 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS++ + +++ A+D + + + T ++G E G+SAK E+ D + IP
Sbjct: 82 AISQLKSQNMQVLVTHLSEQAIDFREIDYTQPTCIMVGQEKKGISAKALELADKHIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|417745748|ref|ZP_12394265.1| spoU rRNA Methylase family protein [Shigella flexneri 2930-71]
gi|332764147|gb|EGJ94384.1| spoU rRNA Methylase family protein [Shigella flexneri 2930-71]
Length = 206
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V + ++ DA
Sbjct: 1 MEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++DNAVD + + + T L+G E G++ + + D + I
Sbjct: 61 AHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITQEALALADQDIIILMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|407793544|ref|ZP_11140577.1| tRNA guanosine-2'-O-methyltransferase [Idiomarina xiamenensis
10-D-4]
gi|407214621|gb|EKE84465.1| tRNA guanosine-2'-O-methyltransferase [Idiomarina xiamenensis
10-D-4]
Length = 233
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ N+ K+HN+ + RSA A GV ++ V + + + GS + V S+ DA
Sbjct: 24 LENVHKQHNLAAVVRSADAVGVHDVHAVWHCKKSRISGGTALGSQNWVRVHKHRSIDDAL 83
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+K + I ++D+AVD + + + TA LLG E G+S + D V IP
Sbjct: 84 QTIKQQGMQIVVTHLSDSAVDFREIDYTRPTAILLGQEKYGVSEQALAAADQQVVIPML- 142
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 143 GMVQSLNVSVAGAVMLY 159
>gi|317050128|ref|YP_004117776.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. At-9b]
gi|316951745|gb|ADU71220.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. At-9b]
Length = 231
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R S GS S V + +++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSVRMRTMVSASAGSNSWVKVKTHRNITD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++ AVD + + + T L+G E G++A+ + D + IP
Sbjct: 82 AVSHLKTQGMQVLATNLSAKAVDFREIDYTRPTCILMGQEKTGITAEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|443671462|ref|ZP_21136571.1| TrmH family RNA methyltransferase [Rhodococcus sp. AW25M09]
gi|443415957|emb|CCQ14908.1| TrmH family RNA methyltransferase [Rhodococcus sp. AW25M09]
Length = 229
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF + +VGRR +N G+ + + + +H S+
Sbjct: 81 HVAIENFTNDANIGTVVRTANAFAAQAVHIVGRRRWNRRGAMVTDRYQHLQHHDSVEALM 140
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ T +V + + L G EG G++ E V I Q+
Sbjct: 141 AFAAEQGLVVVAVDNTPGSVPIETAELPRKCLLLFGQEGPGVTDSARESASMTVSIAQF- 199
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 200 GSTRSINAGVAAGIAMHSW 218
>gi|94986799|ref|YP_594732.1| rRNA methylases [Lawsonia intracellularis PHE/MN1-00]
gi|442555629|ref|YP_007365454.1| SpoU rRNA methylase [Lawsonia intracellularis N343]
gi|94731048|emb|CAJ54411.1| rRNA methylases [Lawsonia intracellularis PHE/MN1-00]
gi|441493076|gb|AGC49770.1| SpoU rRNA methylase [Lawsonia intracellularis N343]
Length = 196
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNFRH--FHSLSD 62
+V+ NI HNV + RSA AFG+ + + F GS S S + +H ++
Sbjct: 26 LVLANIHDPHNVSAIYRSADAFGIDTIHLYYTDTPFPKLGSKSSASAKKWVKTIYHQSAN 85
Query: 63 ARV-FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+ LK + + T A + H F STA ++GNE G+ + + D +YIP
Sbjct: 86 KLIRMLKEDNYKVIATSCTSQAQPLLSHNFTGSTAIIMGNEHAGVPPELTGLVDSELYIP 145
Query: 122 QYGGGTASLNVTVAASIVL 140
Y G S NV+VAA+I+L
Sbjct: 146 MY-GMVQSFNVSVAAAIIL 163
>gi|148271834|ref|YP_001221395.1| putative RNA methyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147829764|emb|CAN00682.1| putative RNA methyltransferase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 219
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ RSA AF + +VGRR +N G+ + + + H ++ D
Sbjct: 74 HVAIENWQHDMNIGSIVRSANAFAADTVHIVGRRRWNKRGAMVTDRYQHVVHHATIDDLV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + I ++ D +V + + + G EG GLS + D V I Q+
Sbjct: 134 EWARGEGLPIIAIDNVDGSVLLETTRLPERCVLVFGQEGPGLSDEAVAAADMTVAISQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N + AA++V+H +
Sbjct: 193 GSTRSINASAAAAVVMHAW 211
>gi|227327134|ref|ZP_03831158.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 230
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HNV + R+A A GV E+ + R + GS S V + ++ D
Sbjct: 22 ICMEQVHKPHNVSAVIRTADAVGVHEIHAIWPTSRMKTLVSSAAGSNSWVQVKTHRNIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++++AVD + + + T LLG E G++A+ ++ D + IP
Sbjct: 82 AVGHLKAEGMQVLATNLSEHAVDFREIDYTRPTCILLGQEKTGITAEALKLADRDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|227494335|ref|ZP_03924651.1| tRNA/rRNA methyltransferase [Actinomyces coleocanis DSM 15436]
gi|226832069|gb|EEH64452.1| tRNA/rRNA methyltransferase [Actinomyces coleocanis DSM 15436]
Length = 210
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V + N+ N+G++ R+A A GV + +VGRR +N G+ + ++ H + +
Sbjct: 68 VAIENLGHDFNIGSIVRTANAMGVRHVHIVGRRRWNRRGAMVTDRYMQVHHHPDVESFQA 127
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
++ I GV+ + +V + + + ++G E GLS + I + V+I QY G
Sbjct: 128 AMQEAGMRIVGVDNIERSVPLEETVLPLNCVMVMGEESTGLSPEMAAISEEIVHITQY-G 186
Query: 126 GTASLNVTVAASIVL 140
T S+NV AA+I +
Sbjct: 187 STRSMNVGHAAAISM 201
>gi|254457129|ref|ZP_05070557.1| RNA methyltransferase, TrmH family [Sulfurimonas gotlandica GD1]
gi|373867362|ref|ZP_09603760.1| rRNA methylase [Sulfurimonas gotlandica GD1]
gi|207085921|gb|EDZ63205.1| RNA methyltransferase, TrmH family [Sulfurimonas gotlandica GD1]
gi|372469463|gb|EHP29667.1| rRNA methylase [Sulfurimonas gotlandica GD1]
Length = 259
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 8/139 (5%)
Query: 11 IAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHSLSDAR 64
I NVG++ARSA A GV +L R+ + +G S G S + + +S
Sbjct: 119 ITSTENVGSIARSAAALGVDSYLL-PRQSPHPYGRRALRVSMGYVSKLKVHIYEDISQTI 177
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK I E+T +A ++Q + L+G+EG G+S + +ICD + I +
Sbjct: 178 QELKKDGYRIYAAEVTPDATLLSQVKSPQKWVLLMGHEGKGISQEVLDICDEVLSI-EMA 236
Query: 125 GGTASLNVTVAASIVLHHF 143
G S NV+VAASI+++
Sbjct: 237 PGVKSFNVSVAASIMMYQL 255
>gi|159900290|ref|YP_001546537.1| RNA methyltransferase [Herpetosiphon aurantiacus DSM 785]
gi|159893329|gb|ABX06409.1| RNA methyltransferase, TrmH family, group 3 [Herpetosiphon
aurantiacus DSM 785]
Length = 246
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 15 HNVGTLARSATAFGVSEMILVGRRD-------FNAFGSHGSTSHVNFRHFHSLSDARVFL 67
N+GTL R+A G +I RR NA S G+ H+ +++ L
Sbjct: 108 QNIGTLMRTAEIVGAHGIIFPDRRSASITPAVINA--SAGAVEHLYVAQITNIAQTIKHL 165
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
+ + + GVE + AVD + + + A ++G EG GL+ E CD V +P G
Sbjct: 166 QEYNIWVAGVEDDERAVDFDKANLRGALALVIGAEGPGLARLTRERCDLLVRLPMR-GNV 224
Query: 128 ASLNVTVAASIVLHH 142
ASLN A SI+L+H
Sbjct: 225 ASLNAATAGSIILYH 239
>gi|410461723|ref|ZP_11315369.1| tRNA/rRNA methyltransferase [Bacillus azotoformans LMG 9581]
gi|409925490|gb|EKN62701.1| tRNA/rRNA methyltransferase [Bacillus azotoformans LMG 9581]
Length = 247
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G+ +I+ RR A S G+ HV +
Sbjct: 97 FLILDEIEDPHNLGSILRTADAAGIHGVIIPKRRAVGLTAAVAKASTGAIEHVPVARVTN 156
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK K I G + D Q K A ++G+EG G+ E CDF +
Sbjct: 157 LARTMEELKEKGIWIIGTD-AKGKQDFRQMDAKMPLAIVIGSEGKGIGRLISEKCDFLIR 215
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+P G T SLN +VAAS++++
Sbjct: 216 LPMVGKVT-SLNASVAASLLMYEV 238
>gi|419705160|ref|ZP_14232700.1| tRNA/rRNA methyltransferase [Mycoplasma canis UFG1]
gi|384395545|gb|EIE41975.1| tRNA/rRNA methyltransferase [Mycoplasma canis UFG1]
Length = 233
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAFG---SHGSTSHVNFRHF 57
E +++ I HN+G + R+A A GV+ ++L NA S G +NF
Sbjct: 83 EIVLMLDKIQDPHNLGAIIRTANATGVTNIVLPKENSASINATSLKVSSGGFVGINFYRV 142
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+SLS LK + AV + + K + ++GNEG G+S +CD
Sbjct: 143 NSLSATITKLKKAGYWSYATALDKEAVSLAHVNYNKPSIIIVGNEGDGVSKSVLSVCDSK 202
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIPQ G S+NV+VA IVL F
Sbjct: 203 IYIPQ-KGTVQSMNVSVATGIVLFDF 227
>gi|262183385|ref|ZP_06042806.1| putative rRNA methylase [Corynebacterium aurimucosum ATCC 700975]
Length = 224
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + H +S+
Sbjct: 76 HIAIENFENDSNIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLMHHTDVSELM 135
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +D + ++ T V + + L G EG G+S + + I Q+
Sbjct: 136 AWAADQDLTVVAIDNTPGCVPLETAELPERCLLLFGQEGPGVSPEAQDAAVMTCSIAQF- 194
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 195 GSTRSINAGVAAGIAMHAW 213
>gi|406839032|ref|ZP_11098626.1| TRNA/rRNA methyltransferase [Lactobacillus vini DSM 20605]
Length = 250
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ NI HN+G++ R+A A GV+ +I+ RR A S G+ +V +L
Sbjct: 105 LILDNIEDPHNLGSIIRTADAAGVTGIIIPQRRAVQLTSVVAKTSTGAIEYVPVARVTNL 164
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A LK I G ++T D Q + S A ++GNEG G+S + CD + I
Sbjct: 165 VQAAKQLKKAGFWIFGTDMTGK--DYRQWNAQGSIALIIGNEGKGISPLLKKQCDELLTI 222
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
P G SLN +VAAS++++ GF+ R
Sbjct: 223 PMV-GHVQSLNASVAASLLIYQ-----GFTSR 248
>gi|227834128|ref|YP_002835835.1| rRNA methylase [Corynebacterium aurimucosum ATCC 700975]
gi|227455144|gb|ACP33897.1| putative rRNA methylase [Corynebacterium aurimucosum ATCC 700975]
Length = 247
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + H +S+
Sbjct: 99 HIAIENFENDSNIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLMHHTDVSELM 158
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +D + ++ T V + + L G EG G+S + + I Q+
Sbjct: 159 AWAADQDLTVVAIDNTPGCVPLETAELPERCLLLFGQEGPGVSPEAQDAAVMTCSIAQF- 217
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 218 GSTRSINAGVAAGIAMHAW 236
>gi|443288705|ref|ZP_21027799.1| tRNA/rRNA methyltransferase [Micromonospora lupini str. Lupac 08]
gi|385888106|emb|CCH15873.1| tRNA/rRNA methyltransferase [Micromonospora lupini str. Lupac 08]
Length = 209
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++ +
Sbjct: 62 HVAIENWQHDFNIGTVVRNANAFNAAEVHIVGRRRWNRRGAMVTDRYQHVRHHETIEEFV 121
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + G++ + + + L G EG GLS C I QY
Sbjct: 122 DWAAGRRLPVLGIDNLPGSRPLETGTLPRDCVLLFGQEGPGLSEPARAACAQLYSIAQY- 180
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ I +H +
Sbjct: 181 GSTRSINAGVASGIAMHAW 199
>gi|421727986|ref|ZP_16167143.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca M5al]
gi|410371168|gb|EKP25892.1| tRNA guanosine-2'-O-methyltransferase [Klebsiella oxytoca M5al]
Length = 229
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVG-RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ I G A + GS S V + ++ +
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHEVHAIWPGSHMRTMASAAAGSNSWVQVKTHRTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++D AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVTHLKGQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|172041466|ref|YP_001801180.1| rRNA methylase [Corynebacterium urealyticum DSM 7109]
gi|448824390|ref|YP_007417559.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7111]
gi|171852770|emb|CAQ05746.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7109]
gi|448277887|gb|AGE37311.1| putative rRNA methylase [Corynebacterium urealyticum DSM 7111]
Length = 243
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
E ++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H ++++
Sbjct: 93 ELHIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLEHHKTVAE 152
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ +D + V+ T +V + + L G EG G++ + V I Q
Sbjct: 153 VLDYAAEQDLAVVAVDNTPGSVPLETAELPRRCLLLFGQEGPGVTEEAQRGARMTVSIAQ 212
Query: 123 YGGGTASLNVTVAASIVLHHF 143
+ G T S+N VAA I +H +
Sbjct: 213 F-GSTRSINAGVAAGIAMHAW 232
>gi|334126221|ref|ZP_08500200.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter hormaechei ATCC
49162]
gi|333385881|gb|EGK57107.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter hormaechei ATCC
49162]
Length = 229
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V+ + ++ +
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGTRMRTMASTAAGSNSWVSVKTHQTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + +++ AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVSHLKGRGMQVLATHLSEKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|335038724|ref|ZP_08531938.1| RNA methyltransferase, TrmH family, group 3 [Caldalkalibacillus
thermarum TA2.A1]
gi|334181388|gb|EGL83939.1| RNA methyltransferase, TrmH family, group 3 [Caldalkalibacillus
thermarum TA2.A1]
Length = 247
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +I+ RR A S G+ +V +
Sbjct: 98 FLILDGIEDPHNLGSILRTADATGAHGVIIPKRRSAGLTATVAKTSAGAIHYVPVTRVTN 157
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK++ +CG D D Q F A ++GNEG G+S E CD+ V
Sbjct: 158 LAQTIEELKTRHIWVCGTA-ADAQQDFRQADFTVPVAVVIGNEGKGISRLVREKCDYHVK 216
Query: 120 IPQYGGGTASLNVTVAASIVL 140
IP G +SLN +VAAS+++
Sbjct: 217 IP-LAGRVSSLNASVAASVLM 236
>gi|145593291|ref|YP_001157588.1| tRNA/rRNA methyltransferase SpoU [Salinispora tropica CNB-440]
gi|145302628|gb|ABP53210.1| tRNA/rRNA methyltransferase (SpoU) [Salinispora tropica CNB-440]
Length = 207
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++
Sbjct: 60 HVAIENWQHDLNIGTVVRNANAFLAAEVHIVGRRRWNRRGAMVTDRYQHVRHHETIEGFV 119
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + G++ + + L G EG GLS CD I QY
Sbjct: 120 AWAAGAGLSVVGIDNLPGCRPLETAALPRQCVLLFGQEGPGLSDPARAACDQLFSIAQY- 178
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ I +H +
Sbjct: 179 GSTRSINAGVASGIAMHAW 197
>gi|401761640|ref|YP_006576647.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
gi|400173174|gb|AFP68023.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae ENHKU01]
Length = 229
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAF-GSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ + G R N + GS S V+ + ++ +
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGTRMRNMVSAAAGSNSWVSVKTHQTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVSHLKGRGMQVLATHLSAKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|451945237|ref|YP_007465873.1| RNA methyltransferase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451904624|gb|AGF73511.1| RNA methyltransferase [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 222
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + H +
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLMHHPDVHSLL 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
V+ D + ++ T AV + + L G EG G+S + E I Q+
Sbjct: 134 VWALRNDLTVVSIDNTPGAVPLETVELPRECLLLFGQEGPGISPEAAEGSLMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHTW 211
>gi|323490595|ref|ZP_08095800.1| trmH family tRNA/rRNA methyltransferase yacO [Planococcus
donghaensis MPA1U2]
gi|323395687|gb|EGA88528.1| trmH family tRNA/rRNA methyltransferase yacO [Planococcus
donghaensis MPA1U2]
Length = 246
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A GV +I+ RR G S G+ HV ++
Sbjct: 97 FLILDELEDPHNLGSIMRTADAIGVHGLIIPKRRAVGLTGVVAKASTGAIEHVPVVRINN 156
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + I G + +VD + A ++G+EG G+S E CDF
Sbjct: 157 LSQTVDELKKRGVWIAGTD-AKESVDYRRMDAALPLAVIIGSEGKGMSRILREKCDFLYQ 215
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+P G T SLN +VAAS++++
Sbjct: 216 LPMIGHVT-SLNASVAASLLMYEV 238
>gi|297182173|gb|ADI18344.1| rRNA methylases [uncultured actinobacterium HF4000_04C13]
Length = 172
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTS--------HVNF 54
E +++ ++ +NVG + R+A A+ V+ + L G A +H T+ ++ +
Sbjct: 23 EVALLLDSVQTPYNVGAILRTAAAYRVAHLWLAGS---TAPPTHAKTAKTALGTGRYLTW 79
Query: 55 RHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEIC 114
+S+A +++ + GVE+ D AV + + + G+E GLSA C
Sbjct: 80 TICEEVSEAIEGIRAAGYGLVGVELADQAVPINEAALPEKACLAFGHEDRGLSATTLAAC 139
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHF 143
D +IPQ G SLNV+ AA I L+
Sbjct: 140 DVVAFIPQL-GKVGSLNVSTAAGIALYEL 167
>gi|389816097|ref|ZP_10207284.1| trmH family tRNA/rRNA methyltransferase yacO [Planococcus
antarcticus DSM 14505]
gi|388465361|gb|EIM07679.1| trmH family tRNA/rRNA methyltransferase yacO [Planococcus
antarcticus DSM 14505]
Length = 246
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A GV +I+ RR G S G+ HV ++
Sbjct: 97 FLILDELEDPHNLGSIMRTADAIGVHGLIIPKRRAVGLTGVVAKASTGAIEHVPVVRINN 156
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + I G + +VD + A ++G+EG G+S E CDF
Sbjct: 157 LSQTVDELKKRGVWIAGTD-AKESVDYRKMDASLPLAVIIGSEGKGMSRILREKCDFLYQ 215
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+P G T SLN +VAAS++++
Sbjct: 216 LPMVGHVT-SLNASVAASLLVYEV 238
>gi|375103232|ref|ZP_09749495.1| rRNA methylase [Saccharomonospora cyanea NA-134]
gi|374663964|gb|EHR63842.1| rRNA methylase [Saccharomonospora cyanea NA-134]
Length = 215
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + +VG+R +N G+ + + + H +S
Sbjct: 67 HVAIENFQHDHNIGTVVRTANAFAAKAVHIVGKRRWNRRGAMVTDRYQHLHHHADVSGLV 126
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ T A + + L G EG GLS V I Q+
Sbjct: 127 RFAAEHGLTVVAVDNTPGAEPIETVRLPRDCVLLFGQEGPGLSEDAQHAASLVVSIAQF- 185
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 186 GTTRSINAGVAAGIVMHSW 204
>gi|419705811|ref|ZP_14233344.1| tRNA/rRNA methyltransferase [Mycoplasma canis UFG4]
gi|384395743|gb|EIE42171.1| tRNA/rRNA methyltransferase [Mycoplasma canis UFG4]
Length = 233
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAFG---SHGSTSHVNFRHF 57
E +++ I HN+G + R+A A GV+ ++L NA S G +NF
Sbjct: 83 EIVLMLDKIQDPHNLGAIIRTANATGVTNIVLPKENSASINATSLKVSSGGFVGINFYRV 142
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+SLS LK + AV + + K + ++GNEG G+S +CD
Sbjct: 143 NSLSATITKLKKAGYWSYATALDKEAVSLAHVNYNKPSIIVVGNEGDGVSKSVLSVCDSK 202
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIPQ G S+NV+VA IVL F
Sbjct: 203 IYIPQ-KGTVQSMNVSVATGIVLFDF 227
>gi|269218069|ref|ZP_06161923.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 848
str. F0332]
gi|269213004|gb|EEZ79344.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 848
str. F0332]
Length = 238
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
+ + N+A N+G++ R+ AF VS + +VGR+ +N G+ + +V+ H + D
Sbjct: 97 IAIENLAHDLNIGSIVRTGNAFNVSGVHVVGRKRWNRKGALVTDRYVDVFHRPEVRDVVE 156
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ ++ D + V+ + + + + + G E G+S + CDF V I QY G
Sbjct: 157 WARANDYAMVAVDNPPGSAALEETRLPERCLLVFGQESSGISPELLAACDFAVRIEQY-G 215
Query: 126 GTASLNVTVAASIVLHHFGV 145
T S+NV AA+I +H + V
Sbjct: 216 STRSMNVAAAAAIAMHWWSV 235
>gi|346226674|ref|ZP_08847816.1| tRNA/rRNA methyltransferase [Anaerophaga thermohalophila DSM 12881]
Length = 178
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
VV+ NI HNVG++ R++ AF + + L G A H G+ V + +F
Sbjct: 27 VVLDNIRSLHNVGSIFRTSDAFRIRSVFLCG---ITATPPHKEIHKTALGAEESVEWHYF 83
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICD 115
+ +DA LK + + G+E TD ++ + + K A GNE G+ + + CD
Sbjct: 84 NKTTDAVEMLKKEGFFLIGIEQTDESISLPAFEPDMTKKYAVFFGNEVKGVDQRVIDECD 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHFG 144
+ IPQ+ G S NV+V+A IVL
Sbjct: 144 MCLEIPQF-GTKHSFNVSVSAGIVLWELA 171
>gi|309789615|ref|ZP_07684196.1| RNA methyltransferase [Oscillochloris trichoides DG-6]
gi|308228351|gb|EFO81998.1| RNA methyltransferase [Oscillochloris trichoides DG6]
Length = 250
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
Query: 15 HNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSLSDARVFLKS 69
N+GTL R+A GV + + GRR S G+T H+ +L+ L+
Sbjct: 109 QNIGTLLRTAEVVGVHGVAIPGRRAAEITPAVVNASSGATEHLRVVLVGNLAQTIATLQR 168
Query: 70 KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTAS 129
+ + G+E + A D+ A ++G EG GL+ E CDF V +P G AS
Sbjct: 169 EGVWVVGLEDDEQAQDLDAADLNLPLALVVGAEGPGLARLVRERCDFLVRLP-MAGQIAS 227
Query: 130 LNVTVAASIVLHH 142
LN +VA SI L++
Sbjct: 228 LNASVAGSITLYN 240
>gi|124007000|ref|ZP_01691829.1| tRNA/rRNA methyltransferase [Microscilla marina ATCC 23134]
gi|123987453|gb|EAY27173.1| tRNA/rRNA methyltransferase [Microscilla marina ATCC 23134]
Length = 176
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
+V+ NI HNVG+ R++ AF V ++ L G A H G+T V ++H
Sbjct: 27 IVLDNIRSMHNVGSSFRTSDAFLVEKIYLCG---ITAKPPHREIQKTALGATESVAWQHV 83
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFK--KSTAFLLGNEGMGLSAKECEICD 115
+ +A LK + I +E D +V + + F+ K AF+ GNE G+ + + D
Sbjct: 84 ATTEEALATLKQEGWTIVAIEQVDKSVSLEKFNFEADKKYAFVFGNEVFGVDEEVVKQAD 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTR 154
+ IPQ+ G SLN++V+ +V +W FS+ R
Sbjct: 144 VCIEIPQF-GTKHSLNISVSMGVV-----IWDYFSKMQR 176
>gi|150010995|gb|ABR57153.1| SpoU rRNA methylase family protein [Staphylococcus xylosus]
Length = 249
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ H+
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIEHIPVMR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L++ LK + G E +N+ D + A ++G+EG G+S + CDF
Sbjct: 154 VTNLANTIETLKDNGYWVVGTE-ANNSTDYREMDVAMPLAIVIGSEGQGMSRLVKDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNK 158
++ IP G SLN +VAAS++++ F +R G+K
Sbjct: 213 YINIPMV-GHVNSLNASVAASLMMYEV-----FRKRNNIGDK 248
>gi|384937841|ref|ZP_10029535.1| tRNA/rRNA methyltransferase [Mycoplasma canis UF31]
gi|419703860|ref|ZP_14231412.1| tRNA/rRNA methyltransferase [Mycoplasma canis PG 14]
gi|419704514|ref|ZP_14232060.1| tRNA/rRNA methyltransferase [Mycoplasma canis UF33]
gi|384393962|gb|EIE40409.1| tRNA/rRNA methyltransferase [Mycoplasma canis UF31]
gi|384394104|gb|EIE40550.1| tRNA/rRNA methyltransferase [Mycoplasma canis PG 14]
gi|384394248|gb|EIE40693.1| tRNA/rRNA methyltransferase [Mycoplasma canis UF33]
Length = 233
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAFG---SHGSTSHVNFRHF 57
E +++ I HN+G + R+A A GV+ ++L NA S G +NF
Sbjct: 83 EIVLMLDKIQDPHNLGAIIRTANATGVTNIVLPKENSASINATSLKVSSGGFVGINFYRV 142
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+SLS LK + AV + + K + ++GNEG G+S +CD
Sbjct: 143 NSLSATITKLKKAGYWSYATALDKEAVSLAHVNYNKPSIIVVGNEGDGVSKSVLSVCDSK 202
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIPQ G S+NV+VA IVL F
Sbjct: 203 IYIPQ-KGTVQSMNVSVATGIVLFDF 227
>gi|240136836|ref|YP_002961303.1| rRNA methylase [Methylobacterium extorquens AM1]
gi|254558711|ref|YP_003065806.1| rRNA methylase [Methylobacterium extorquens DM4]
gi|240006800|gb|ACS38026.1| rRNA methylase [Methylobacterium extorquens AM1]
gi|254265989|emb|CAX21739.1| rRNA methylase [Methylobacterium extorquens DM4]
Length = 268
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+ + I HNVG + R+A AFGV+ ++ R NA G + G HV +
Sbjct: 119 LLALDQITDPHNVGAIVRTAAAFGVTAIVTTARHSPNATGVLAKSASGGLEHVPLVIVRN 178
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L++A + L + G++ +D + ++ +LG EG GL + E CD V
Sbjct: 179 LAEALITLGERGFTRIGLD-SDAGTTLDAVGPRRPAVLVLGAEGKGLRQRTTECCDLLVR 237
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAG 148
I G SLNV+ AA+I L+ AG
Sbjct: 238 I-DATGAIRSLNVSNAAAITLYALTRSAG 265
>gi|163849637|ref|YP_001637680.1| RNA methyltransferase [Methylobacterium extorquens PA1]
gi|163661242|gb|ABY28609.1| RNA methyltransferase, TrmH family, group 3 [Methylobacterium
extorquens PA1]
Length = 268
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+ + I HNVG + R+A AFGV+ ++ R NA G + G HV +
Sbjct: 119 LLALDQITDPHNVGAIVRTAAAFGVTAIVTTARHSPNATGVLAKSASGGLEHVPLVIVRN 178
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L++A + L + G++ +D + ++ +LG EG GL + E CD V
Sbjct: 179 LAEALITLGERGFTRIGLD-SDAGTTLDAVGPRRPAVLVLGAEGKGLRQRTTECCDLLVR 237
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAG 148
I G SLNV+ AA+I L+ AG
Sbjct: 238 I-DATGAIRSLNVSNAAAITLYALTRSAG 265
>gi|188993889|ref|YP_001928141.1| SpoU rRNA methylase family protein [Porphyromonas gingivalis ATCC
33277]
gi|334145836|ref|YP_004508763.1| putative SpoU rRNA methylase family protein [Porphyromonas
gingivalis TDC60]
gi|419970899|ref|ZP_14486370.1| RNA methyltransferase, TrmH family [Porphyromonas gingivalis W50]
gi|188593569|dbj|BAG32544.1| probable SpoU rRNA methylase family protein [Porphyromonas
gingivalis ATCC 33277]
gi|333802990|dbj|BAK24197.1| probable SpoU rRNA methylase family protein [Porphyromonas
gingivalis TDC60]
gi|392609772|gb|EIW92574.1| RNA methyltransferase, TrmH family [Porphyromonas gingivalis W50]
Length = 180
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
+++ +I +NVG++ R+A AF + + L G A H G+ V + +F
Sbjct: 27 IILDDIRSMNNVGSVFRTADAFRLEGLCLCG---ITARPPHPDIHKTALGAEDSVKWEYF 83
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEICD 115
S+ DA LK+K IC +E + ++ + K T A + GNE G+ + ++CD
Sbjct: 84 SSVVDAIEELKAKGYSICAIEQAEGSLSLENFSPSKGTRYALIFGNEVKGVRQEAIDLCD 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHH 142
+ IPQ+ G SLNV+V A IV+
Sbjct: 144 LCLEIPQF-GTKHSLNVSVTAGIVIWQ 169
>gi|187250823|ref|YP_001875305.1| rRNA methylase [Elusimicrobium minutum Pei191]
gi|186970983|gb|ACC97968.1| rRNA methylase [Elusimicrobium minutum Pei191]
Length = 249
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS-----HGSTSHVNFRHFHS 59
++ V + N+G++ RSA G S +IL RR S G+T V +
Sbjct: 101 WIAVDEMTDPQNLGSIIRSAACLGFSTIILPSRRTVGLTPSVYKVASGATEKVTVVEVAN 160
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ A + LK + I G ++ ++ T + F ++G+EG G+ K E CD V
Sbjct: 161 LATALLDLKDEGFWIYGADMGGQSIVKTDYSF--PAVLVVGSEGTGIREKTAEHCDQVVS 218
Query: 120 IPQYGGGTASLNVTVAASIVL 140
IPQ G SLN AASI++
Sbjct: 219 IPQAPGSVDSLNAANAASIIM 239
>gi|123965718|ref|YP_001010799.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9515]
gi|123200084|gb|ABM71692.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9515]
Length = 224
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD----FNAFGSHGSTSHVNFRHFHSLS 61
V+V + K HN+ + R+ A GV E + +RD FN+ + GS V + +
Sbjct: 24 VLVEAVNKPHNLSAILRTCDAAGVFEANFICKRDEVKTFNS-TAQGSQKWVKLNNHETTI 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK K + G + D++ D + ++T F+LG E GLS + D ++IP
Sbjct: 83 SAVSHLKKKGFKLYGTTLNDSSTDYRNFDYAENTCFVLGAEKWGLSDELISKVDESIFIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAASI+L
Sbjct: 143 M-TGMVQSLNVSVAASILL 160
>gi|452951357|gb|EME56807.1| rRNA methylase [Amycolatopsis decaplanina DSM 44594]
Length = 217
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + + +VGRR +N G+ + + + H ++
Sbjct: 69 HVAIENFQHDHNIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLLHHEDVNGLL 128
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F ++ + V+ T + V + L G EG GLSA+ + V I Q+
Sbjct: 129 TFAATEGLAVVAVDNTPGSRPVETAELPRECVLLFGQEGPGLSAEAQKTASLVVSIAQF- 187
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 188 GTTRSINAGVAAGIVMHAW 206
>gi|383788764|ref|YP_005473333.1| RNA methyltransferase [Caldisericum exile AZM16c01]
gi|381364401|dbj|BAL81230.1| RNA methyltransferase [Caldisericum exile AZM16c01]
Length = 252
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I N+G + R+A GV ++I+ R S G+ HVN +L
Sbjct: 100 LILDRIQDPQNLGAIVRAAECAGVKDIIIQERESCEVTETVMSISSGAVFHVNIYKVSNL 159
Query: 61 SDARVFLKSKDCDICGVEITDN----AVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ A LK I G ++ +D HPF AF++GNEG G+ + CD+
Sbjct: 160 AQAISELKENRVWIVGTDLNAKDLYFEIDYKNHPF----AFIMGNEGDGVRKGLLKECDY 215
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDG 156
V IP G SLNV+VA I+L + F E+ ++G
Sbjct: 216 VVKIPM-RGRVNSLNVSVATGIIL-----FKAFEEKLKNG 249
>gi|194476556|ref|YP_002048735.1| putative tRNA (guanosine-2'-O-) - methyltransferase [Paulinella
chromatophora]
gi|171191563|gb|ACB42525.1| putative tRNA (guanosine-2'-O-) - methyltransferase [Paulinella
chromatophora]
Length = 229
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 70/138 (50%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD-FNAFG--SHGSTSHVNFRHFHSLSD 62
V++ ++ K HN+ + RS A G+ E V R+ F + GS V R+++S+
Sbjct: 24 VILEHVEKSHNLSAILRSCDAVGIIEAHAVSLRERLRIFQNTALGSQKWVRLRNYNSIVP 83
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I G + ++D F ++FLLG E GLS + E+ D + IP
Sbjct: 84 AITQLKQRGFKIYGTNLGIGSIDYRNCDFLGPSSFLLGAEKWGLSQEAAELVDQSITIPM 143
Query: 123 YGGGTASLNVTVAASIVL 140
G SLNV+VA +I+L
Sbjct: 144 -SGMVQSLNVSVATAILL 160
>gi|379737121|ref|YP_005330627.1| rRNA methylase [Blastococcus saxobsidens DD2]
gi|378784928|emb|CCG04599.1| rRNA methylase [Blastococcus saxobsidens DD2]
Length = 216
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH +
Sbjct: 68 HVAIENFGHDLNIGTVVRTANAFLAAEVHVVGRRRWNRRGAMVTDRYQHLRHHEDVGGLL 127
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ AV + + L G EG GL+A+ V I Q+
Sbjct: 128 AFAAEGGLAVVAVDNGPGAVPIETAALPERCVLLFGQEGPGLTAEARAGAAITVSIAQF- 186
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 187 GSTRSINAGVAAGIAMHGW 205
>gi|334136735|ref|ZP_08510192.1| RNA methyltransferase, TrmH family, group 3 [Paenibacillus sp.
HGF7]
gi|333605756|gb|EGL17113.1| RNA methyltransferase, TrmH family, group 3 [Paenibacillus sp.
HGF7]
Length = 245
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G++ R+A GV +I+ RR S G+ +V ++
Sbjct: 98 LILDEIEDPHNLGSILRTADCTGVHGVIIPKRRSVGLTATVSKTSAGAVEYVPVARVTNI 157
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S LK + + G ++T A DV + FK A ++GNEG G+ E CDF V +
Sbjct: 158 SQTIADLKERGVWVAGTDVT-AADDVYRSNFKMPLALVIGNEGRGVGRLIKESCDFLVKL 216
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P + G SLN +VAA ++++
Sbjct: 217 PMH-GRVNSLNASVAAGVLMYEV 238
>gi|451337518|ref|ZP_21908060.1| putative RNA methyltransferase [Amycolatopsis azurea DSM 43854]
gi|449419827|gb|EMD25348.1| putative RNA methyltransferase [Amycolatopsis azurea DSM 43854]
Length = 206
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + + +VGRR +N G+ + + + H ++
Sbjct: 58 HVAIENFQHDHNIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLLHHEDVNGLL 117
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F ++ + V+ T + V + L G EG GLSA+ + V I Q+
Sbjct: 118 TFAAAEGLAVVAVDNTPGSQPVETAELPRECVLLFGQEGPGLSAEAQKTASLVVSIAQF- 176
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 177 GTTRSINAGVAAGIVMHAW 195
>gi|385680410|ref|ZP_10054338.1| rRNA methylase [Amycolatopsis sp. ATCC 39116]
Length = 216
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + + +VGRR +N G+ + + + H +
Sbjct: 68 HVAIENFQHDHNIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLEHHPDVPSLL 127
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + I V+ T + V + L G EG GLSA+ + V I Q+
Sbjct: 128 TYARDRGLAIVAVDNTPGSQRVETAELPRECVLLFGQEGPGLSAEAHDAAAVVVSIAQF- 186
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 187 GSTRSINAGVAAGIVMHAW 205
>gi|308047831|ref|YP_003911397.1| tRNA guanosine-2'-O-methyltransferase [Ferrimonas balearica DSM
9799]
gi|307630021|gb|ADN74323.1| tRNA guanosine-2'-O-methyltransferase [Ferrimonas balearica DSM
9799]
Length = 235
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRD-FNAFGSHGSTSHVNFRHFHSLSD 62
+ + ++ K HN+ + R+A A GV E+ + +G + + GS V S+ D
Sbjct: 22 ICLEDVHKPHNLSAMIRTADAIGVPEVHAVFLGEDNRLRGGTATGSQQWVKVNRHQSIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A ++ + + +++ AVD + K TA L+G E G+S + + D V +P
Sbjct: 82 AVARMREQGMQVIATNLSEKAVDFRSIDYTKPTAILMGQEKTGISQEALALADHDVIVPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALLLY 159
>gi|219684874|ref|ZP_03539816.1| tRNA/rRNA methyltransferase [Borrelia garinii PBr]
gi|219671819|gb|EED28874.1| tRNA/rRNA methyltransferase [Borrelia garinii PBr]
Length = 218
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + N R+ G+S++ ++ +R+ N + GS+ +N +++ A
Sbjct: 38 VLEDIFQPQNASATIRTGEILGLSDVHIISKRNKCTLNPDVTLGSSQWINLNRYNNTKFA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I + + ++++ P A G E GLSA+ E D ++ IP Y
Sbjct: 98 LDRLKSDGYSIVATSLDEQSINLEDFPINNKMAVFFGTELTGLSAEAFEAADLYLKIPMY 157
Query: 124 GGGTASLNVTVAASIVLHHFGV 145
G T S N++VA +IV++ +
Sbjct: 158 -GFTQSYNISVAVAIVMYSLSI 178
>gi|419959048|ref|ZP_14475105.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
gi|295095239|emb|CBK84329.1| rRNA methylases [Enterobacter cloacae subsp. cloacae NCTC 9394]
gi|388606017|gb|EIM35230.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae GS1]
Length = 229
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V+ + ++ +
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGARMRTMASTAAGSNSWVSVKTHQTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVSHLKGRGMQVLATNLSAKAVDFREIDYTRPTCILMGQEKTGITQEALDLADRDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|317507290|ref|ZP_07965033.1| SpoU rRNA methylase [Segniliparus rugosus ATCC BAA-974]
gi|316254419|gb|EFV13746.1| SpoU rRNA methylase [Segniliparus rugosus ATCC BAA-974]
Length = 220
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+VV+ N+A N+GT+ R+A AF + +VGRR +N G+ ++H H + A+
Sbjct: 71 HVVIENLAHDANIGTIVRTANAFLAEAVHIVGRRRWN---RRGAMVTDRYQHVHHHATAQ 127
Query: 65 VF---LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
F + + V+ T A + + A L G EG GLS + + I
Sbjct: 128 AFADYAAGRGLAVIAVDNTPGAEPMETFALPRRCALLFGQEGTGLSPELRGTAQSALAIA 187
Query: 122 QYGGGTASLNVTVAASIVLHHF 143
Q+ G T S+NV VAA I +H +
Sbjct: 188 QF-GSTRSINVGVAAGIAMHAW 208
>gi|308188674|ref|YP_003932805.1| RNA methylase [Pantoea vagans C9-1]
gi|308059184|gb|ADO11356.1| putative RNA methylase [Pantoea vagans C9-1]
Length = 232
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R A S GS S V ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSQRMRTQASASAGSNSWVKVVTHPTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++D+AVD + + T L+G E G++ + + D + IP
Sbjct: 82 AVKQLKQQKMQVLATHLSDDAVDFREIDYTLPTCILMGQEKTGITEEALALADRKIVIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 142 V-GMVQSLNVSVACALILY 159
>gi|253690572|ref|YP_003019762.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|403056463|ref|YP_006644680.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|251757150|gb|ACT15226.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|402803789|gb|AFR01427.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 230
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 18/219 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HN+ + R+A A GV ++ + R + GS S V + ++ D
Sbjct: 22 ICMEQVHKPHNISAVIRTADAVGVHQVHAIWPTSRMKTLVSSAAGSNSWVQVKTHRNIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++++AVD + + + T LLG E G++A+ ++ D + IP
Sbjct: 82 AVGHLKAEGMQVLATNLSEHAVDFREIDYTRPTCILLGQEKTGITAEALKLADRDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSA----RQVRRSFCAEKP 178
G SLNV+VA++++L+ ++R R E S Q R F P
Sbjct: 141 MTGMVQSLNVSVASALILYE-------AQRQRQIAGMYQREDSPLDEEEQQRLLFEGGYP 193
Query: 179 ESIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ R ++R+ + D G V+ + A+ + E
Sbjct: 194 ---VLARVAKRKGLPRPYIDHQGQIVADTPWWAAMQSSE 229
>gi|269957913|ref|YP_003327702.1| tRNA/rRNA methyltransferase SpoU [Xylanimonas cellulosilytica DSM
15894]
gi|269306594|gb|ACZ32144.1| tRNA/rRNA methyltransferase (SpoU) [Xylanimonas cellulosilytica DSM
15894]
Length = 283
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHF----- 57
E +V + N A N+G++ R+A AF V+ + +VGRR +N G+ + +++ H
Sbjct: 118 ELHVAIENWAHDLNIGSVVRTANAFNVAGVHIVGRRRWNRRGAMVTDRYLHVYHHEDAAA 177
Query: 58 -------HSLSDARVFLKSKDCD------ICGVEITDNAVDVTQHPFKKSTAFLLGNEGM 104
H LS+ R L S + D + G++ +V + S +LG E
Sbjct: 178 LAAWAAAHELSEPRKPLGSGESDKAVGLPLVGIDNVPGSVPLEGFALPASCVLVLGQEST 237
Query: 105 GLSAKECEICDFFVYIPQYGGGTASLNVTVAASIVL 140
GL+A CD ++I Q+ G T SLN A +I +
Sbjct: 238 GLTAPMQAACDVVLHITQH-GSTRSLNAGAAGAIAM 272
>gi|59710710|ref|YP_203486.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri ES114]
gi|59478811|gb|AAW84598.1| tRNA (Guanosine-2'-O-)-methyltransferase [Vibrio fischeri ES114]
Length = 229
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSDAR 64
+ + K +NV + R+A A G+ ++ V + H G+ + V+ ++ DA
Sbjct: 24 LEEVHKANNVSAIVRTADATGIHKIHAVWPTEQMQMLGHTSAGARNWVDVETHKNIEDAF 83
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++D AVD + + K TA +LG+E G+S K + D + IP
Sbjct: 84 ATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSEKTGISKKALAMADQDIIIPMV- 142
Query: 125 GGTASLNVTVAASIVLHHFGVWAGFSERTRD 155
G SLNV+VA++++L+ ++R RD
Sbjct: 143 GMVQSLNVSVASALILYE-------AQRQRD 166
>gi|227489272|ref|ZP_03919588.1| RNA methyltransferase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227540862|ref|ZP_03970911.1| RNA methyltransferase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227090803|gb|EEI26115.1| RNA methyltransferase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227183394|gb|EEI64366.1| RNA methyltransferase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 213
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + H +++D
Sbjct: 65 HIAIENFENDMNIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLMHHDTIADLI 124
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +D + ++ +V + + L G EG G++ + + + I Q+
Sbjct: 125 SWANEQDLQVLAIDNIPGSVPLETATLPERCLLLFGQEGPGVTPEAQDAAVMTLSIAQF- 183
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 184 GSTRSINAGVAAGIAMHTW 202
>gi|441518814|ref|ZP_21000525.1| putative RNA methyltransferase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441454314|dbj|GAC58486.1| putative RNA methyltransferase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 219
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF + +VGRR +N G+ + + + H ++D
Sbjct: 71 HVAIENWGHDANIGTVVRTANAFLAQSVHIVGRRRWNRRGAMVTDRYQHVHHHPEIADLM 130
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + V+ T +V + + ++ F+ G EG G++ D V I Q+
Sbjct: 131 RWAGEHGLTVVAVDNTPGSVRLERTRLPENCLFVFGQEGPGVTEAASAAADLTVSIAQF- 189
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 190 GSTRSINAGVAAGIVMHTW 208
>gi|86605012|ref|YP_473775.1| RNA methyltransferase [Synechococcus sp. JA-3-3Ab]
gi|86553554|gb|ABC98512.1| RNA methyltransferase, TrmH family, group 3 [Synechococcus sp.
JA-3-3Ab]
Length = 354
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
VV+ I HN+G +ARS AFG+ M++ RR A G + V +L ARV
Sbjct: 191 VVLDGIQDPHNLGAIARSVEAFGMQGMVIPQRR---AAGVTATVMKVAAGALSTLPVARV 247
Query: 66 --------FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+LK + + G + A + F++ A ++G+EG G+S CD
Sbjct: 248 VNLNRALEYLKGQGFWVYGT-TSQGAAPIYSADFRRPIALVVGSEGEGISLLTQRHCDQL 306
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IP G T SLN +VAA I L+
Sbjct: 307 LSIP-LAGRTESLNASVAAGIALYEI 331
>gi|365968389|ref|YP_004949950.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae EcWSU1]
gi|365747302|gb|AEW71529.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae EcWSU1]
Length = 229
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V+ + ++ +
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGARMRTMASTAAGSNSWVSVKTHQTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVSHLKGRGMQVLATNLSAKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|390959752|ref|YP_006423509.1| rRNA methylase [Terriglobus roseus DSM 18391]
gi|390414670|gb|AFL90174.1| rRNA methylase, putative, group 3 [Terriglobus roseus DSM 18391]
Length = 263
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 15 HNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSLSDARVFLKS 69
HN+G L R+A GV +++ RR G S G+T HV +L + LK
Sbjct: 104 HNLGALLRTADGAGVDGVLIPERRSAPITGAVAKASAGATEHVRVAKVTNLVRSLEDLKK 163
Query: 70 KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTAS 129
++ I G++ +D Q F A +LG EG GL CDF + +P G S
Sbjct: 164 QNIWIIGLD-ERGTMDYDQFDFNTDVALVLGREGAGLHDLTKRTCDFLLRVP-MAGAVPS 221
Query: 130 LNVTVAASIVLHH 142
LNV+VA ++V++
Sbjct: 222 LNVSVAGAVVMYE 234
>gi|331700240|ref|YP_004336479.1| tRNA/rRNA methyltransferase SpoU [Pseudonocardia dioxanivorans
CB1190]
gi|326954929|gb|AEA28626.1| tRNA/rRNA methyltransferase (SpoU) [Pseudonocardia dioxanivorans
CB1190]
Length = 228
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + + +VGRR +N G+ + + H +
Sbjct: 80 HVAIENFGHDHNIGTVVRTANAFAAAGVHIVGRRRWNRRGAMVTDRYQQLHHHEDAAALA 139
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + V+ T AV + + L G EG GL+ V I Q+
Sbjct: 140 AWAADRGLPVVAVDNTAGAVRLETTALPRRCVLLFGQEGPGLTDTARASAARLVSIAQF- 198
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 199 GSTRSINAGVAAGIVMHAW 217
>gi|305665198|ref|YP_003861485.1| putative SpoU rRNA methylase family protein [Maribacter sp.
HTCC2170]
gi|88709950|gb|EAR02182.1| putative SpoU rRNA methylase family protein [Maribacter sp.
HTCC2170]
Length = 176
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
+V+ NI +N+G++ R+A AF + ++ L G A H G+T V++ +
Sbjct: 27 LVLDNIRSLNNIGSVFRTADAFLIEKIYLCG---ITAIPPHKDIRKTALGATESVSWEYR 83
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEICD 115
+ L++ DC+I VE DN+ + + +K++ A + GNE G+S + D
Sbjct: 84 KDTLELIKELQADDCEIAAVEQADNSQMLNEFLIQKTSKYALVFGNEVKGVSQEVVSASD 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ+G SLN++V+A IV+ F
Sbjct: 144 VVLEIPQFGTK-HSLNISVSAGIVIWDF 170
>gi|320532915|ref|ZP_08033679.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134872|gb|EFW27056.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 171
str. F0337]
Length = 236
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N+++ N+G++ RSA AF V+ + ++GRR +N G+ + +++ RH +
Sbjct: 89 HIAIENVSQDLNIGSIVRSANAFNVAGVHIIGRRRWNKRGAMVTNRYLDVRHHPEPGELL 148
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +++ ++ G++ A + + + G+EG G+SA+ C + I QY
Sbjct: 149 AWARAEGYEVIGIDNGPGAQPLETADLPERCLMVFGSEGEGISAELSAGCSRLLRIGQY- 207
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV AA++ +H +
Sbjct: 208 GSTRSINVAAAAAVAMHTW 226
>gi|157373101|ref|YP_001481090.1| tRNA guanosine-2'-O-methyltransferase [Serratia proteamaculans 568]
gi|157324865|gb|ABV43962.1| tRNA guanosine-2'-O-methyltransferase [Serratia proteamaculans 568]
Length = 231
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S VN + ++ D
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTPRMRTLVSSAAGSNSWVNVKTHPTIVD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + + T LLG E G++ + + D + IP
Sbjct: 82 AVTHLKDQGMQILATNLSARAVDFREVDYTRPTCVLLGQEKTGITEEALRLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|218528187|ref|YP_002419003.1| TrmH family RNA methyltransferase [Methylobacterium extorquens CM4]
gi|218520490|gb|ACK81075.1| RNA methyltransferase, TrmH family, group 3 [Methylobacterium
extorquens CM4]
Length = 268
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+ + I HNVG + R+A AFGV+ ++ R NA G + G HV +
Sbjct: 119 LLALDQITDPHNVGAIVRTAAAFGVTAIVTTARHSPNATGVLAKSASGGLEHVPLVIVRN 178
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L++A + L + G++ +D + ++ +LG EG GL + E CD V
Sbjct: 179 LAEALITLGERGFTRIGLD-SDAGTTLDAVGPRRPAVLVLGAEGKGLRQRTTECCDLLVR 237
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
I G SLNV+ AA+I L+
Sbjct: 238 I-DATGAIRSLNVSNAAAITLYAL 260
>gi|197334204|ref|YP_002154872.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri MJ11]
gi|197315694|gb|ACH65141.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri MJ11]
Length = 229
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSDAR 64
+ + K +NV + R+A A G+ ++ V + H G+ + V+ ++ DA
Sbjct: 24 LEEVHKANNVSAIVRTADATGIHKIHAVWPTEQMQMLGHTSAGARNWVDVETHKNIEDAF 83
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++D AVD + + K TA +LG+E G+S K + D + IP
Sbjct: 84 ATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSEKTGISKKALAMADQDIIIPMV- 142
Query: 125 GGTASLNVTVAASIVLHHFGVWAGFSERTRD 155
G SLNV+VA++++L+ ++R RD
Sbjct: 143 GMVQSLNVSVASALILYE-------AQRQRD 166
>gi|384097473|ref|ZP_09998594.1| tRNA/rRNA methyltransferase (spou) [Imtechella halotolerans K1]
gi|383837441|gb|EID76841.1| tRNA/rRNA methyltransferase (spou) [Imtechella halotolerans K1]
Length = 175
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
VV+ NI +N+G++ R+A AF + ++ L G +D + + G+T VN+ +
Sbjct: 27 VVLDNIRSLNNIGSVFRTADAFLIEKIYLCGITATPPHKDIHK-TALGATESVNWEYIEK 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQ-HPFKKST-AFLLGNEGMGLSAKECEICDFF 117
+D LK++ +E T++A + + P K T A + GNE G+S K CD
Sbjct: 86 TTDVIEHLKTQGIITLAIEQTEHATMLNKFQPDKGCTYAVVFGNEVKGVSQKAVNACDKV 145
Query: 118 VYIPQYGGGTASLNVTVAASIVL 140
+ IPQYG SLN++V+ IVL
Sbjct: 146 IEIPQYGTK-HSLNISVSTGIVL 167
>gi|374293206|ref|YP_005040241.1| putative tRNA/rRNA methyltransferase [Azospirillum lipoferum 4B]
gi|357425145|emb|CBS88028.1| putative tRNA/rRNA methyltransferase [Azospirillum lipoferum 4B]
Length = 194
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLSDA 63
V I+K NVG L R+A AFG S + R+ + G+T H+ ++D
Sbjct: 9 VERISKPGNVGNLMRTAHAFGASFFFAIDPEPDLRETKLVDTSGATLHLPLYIHERVAD- 67
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
F +DC + GVE+TD+AV++ A++LG E LS CD V IP
Sbjct: 68 --FTLPRDCMLVGVELTDDAVELPSFRHPSRAAYVLGPERDSLSPALLARCDHVVKIPM- 124
Query: 124 GGGTASLNVTVAASIVLHHFGVWAG-FSERT 153
+ +NV VA ++V++ + G F+ER
Sbjct: 125 ---SFCINVGVAGALVMYDRMISLGRFAERP 152
>gi|73663533|ref|YP_302314.1| SpoU rRNA methylase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|418577084|ref|ZP_13141214.1| SpoU rRNA methylase family protein [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|90110724|sp|Q49V41.1|TRMHL_STAS1 RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|72496048|dbj|BAE19369.1| SpoU rRNA Methylase family protein [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|379324446|gb|EHY91594.1| SpoU rRNA methylase family protein [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 249
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ H+
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHIPVMR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L++ LK I G E +N+ D + ++G+EG G+S E CDF
Sbjct: 154 VTNLANTIETLKDNGYWIVGTE-AENSTDYREMDAGMPLGIVIGSEGQGMSRLVKEKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNK 158
++ IP G SLN +VAAS++++ F +R G+K
Sbjct: 213 YINIPMV-GHVNSLNASVAASLMMYEV-----FRKRNYIGDK 248
>gi|392399101|ref|YP_006435702.1| rRNA methylase [Flexibacter litoralis DSM 6794]
gi|390530179|gb|AFM05909.1| rRNA methylase [Flexibacter litoralis DSM 6794]
Length = 178
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+++ N+ HNVG R+A AF + ++ L G R+ + G+T V + +F +
Sbjct: 27 IILDNVRSAHNVGAAFRTADAFSIEKIALCGITAKPPHREIQK-TALGATESVEWEYFDT 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEICDFF 117
++A L+ + I +E T + + KK T F+ GNE G+ A+ + CD
Sbjct: 86 TNEAIDTLRKQGYSIFAIEQTTESQKLNTFLPKKETKYGFVFGNEAFGVDAEVLQNCDSA 145
Query: 118 VYIPQYGGGTASLNVTVAASIVLHH 142
+ IPQ+ G SLNV+V+ I+L H
Sbjct: 146 LEIPQF-GTKHSLNVSVSLGIILWH 169
>gi|314932755|ref|ZP_07840124.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus caprae
C87]
gi|417907419|ref|ZP_12551192.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus capitis
VCU116]
gi|313654436|gb|EFS18189.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus caprae
C87]
gi|341596312|gb|EGS38928.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus capitis
VCU116]
Length = 249
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 96 TILILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 155
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK + G E + NA D S A ++G+EG G+S + CDF++
Sbjct: 156 NLSKTIDELKENGFWVAGTEAS-NATDYRDLQADMSLAIVIGSEGQGMSRLVSDKCDFYI 214
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAAS++++
Sbjct: 215 KIPMV-GHVNSLNASVAASLMMYE 237
>gi|423684839|ref|ZP_17659647.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri SR5]
gi|371495886|gb|EHN71480.1| tRNA guanosine-2'-O-methyltransferase [Vibrio fischeri SR5]
Length = 229
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSDAR 64
+ + K +NV + R+A A G+ ++ V + H G+ + V+ ++ DA
Sbjct: 24 LEEVHKANNVSAIVRTADATGIHKIHAVWPTEQMQMLGHTSAGARNWVDVETHKNIEDAF 83
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++D AVD + + K TA +LG+E G+S K + D + IP
Sbjct: 84 ATLKEQGMQILATNLSDTAVDFREIDYTKPTAIILGSEKTGISKKALAMADQDIIIPMV- 142
Query: 125 GGTASLNVTVAASIVLHHFGVWAGFSERTRD 155
G SLNV+VA++++L+ ++R RD
Sbjct: 143 GMVQSLNVSVASALILYE-------AQRQRD 166
>gi|422016022|ref|ZP_16362612.1| tRNA guanosine-2'-O-methyltransferase [Providencia burhodogranariea
DSM 19968]
gi|414095469|gb|EKT57131.1| tRNA guanosine-2'-O-methyltransferase [Providencia burhodogranariea
DSM 19968]
Length = 237
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HNV + RSA A G+ ++ + + + GS S V S D
Sbjct: 22 ICLEEVHKPHNVSAIVRSADAVGIHQIHAIWPDQNVKLSVSSAAGSNSWVKVISHKSTED 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +KS++ + ++++AVD + + + T ++G E G+S+K + D + IP
Sbjct: 82 AISQIKSQNMQVLVTNLSEHAVDFREIDYTRPTCIMVGQEKKGISSKALSLSDQHIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MAGMVQSLNVSVASALILY 159
>gi|404416861|ref|ZP_10998674.1| hypothetical protein SARL_03296 [Staphylococcus arlettae CVD059]
gi|403490749|gb|EJY96281.1| hypothetical protein SARL_03296 [Staphylococcus arlettae CVD059]
Length = 248
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR S G+ HV
Sbjct: 94 LATVLILDGLEDPHNLGSIIRTADASGVDGIIIPKRRSVALTQTVVKASTGAIQHVPIMR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E DNA D + A ++G+EG G+S + CDF
Sbjct: 154 VTNLAQTIESLKEHGYWVAGAE-ADNATDYRELDAGMPLALVIGSEGQGMSRLVKDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLLMYEV 238
>gi|172037390|ref|YP_001803891.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Cyanothece sp.
ATCC 51142]
gi|354553728|ref|ZP_08973034.1| tRNA guanosine-2'-O-methyltransferase [Cyanothece sp. ATCC 51472]
gi|171698844|gb|ACB51825.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Cyanothece sp.
ATCC 51142]
gi|353554445|gb|EHC23835.1| tRNA guanosine-2'-O-methyltransferase [Cyanothece sp. ATCC 51472]
Length = 219
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD-FNAFG--SHGSTSHVNFRHFH-SLS 61
V+ ++ K HN+ + R+ A G+ ++ + D F F S GS + F H H ++
Sbjct: 24 VLTEDVHKPHNLSAIIRTCDAVGILDVHSINTTDEFPTFSQVSQGSDKWI-FLHTHPNIQ 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LKSK I +TD +VD + + TA LLG E G+S + + D + IP
Sbjct: 83 TAINHLKSKKFKIYAAHLTDKSVDYRDIDYTQPTALLLGAEKWGVSEEAASLVDGHIIIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 143 ML-GMVQSLNVSVAAAVIL 160
>gi|28212189|ref|NP_783133.1| 23S rRNA methyltransferase [Clostridium tetani E88]
gi|28204633|gb|AAO37070.1| 23S rRNA methyltransferase [Clostridium tetani E88]
Length = 245
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
+++ I HN G + R+A FGV +I+ RR S G+ HV +++
Sbjct: 97 LILDEIQDPHNFGAIIRTAEVFGVDGIIIPKRRSVGITPIVYKSSVGAVEHVKIAKVNNI 156
Query: 61 SDARVFLKSKDCDICGVEITDNAVD--VTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+ FLK + I G D A D + K A ++G+EG G+S E CD V
Sbjct: 157 NSTIDFLKENNIWIYG---ADMATDRYIYSENLKGPIALVVGSEGKGISKLTKEKCDILV 213
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
IP G SLN +VA IV++
Sbjct: 214 KIPM-SGQINSLNASVAGGIVMYEI 237
>gi|216263798|ref|ZP_03435792.1| tRNA/rRNA methyltransferase [Borrelia afzelii ACA-1]
gi|215979842|gb|EEC20664.1| tRNA/rRNA methyltransferase [Borrelia afzelii ACA-1]
Length = 218
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + HN R+ G+S++ ++ + + N + GS+ +N + + A
Sbjct: 38 VLEDIVQSHNASATIRTGEILGLSDIYVIDKNNKYTLNPDITLGSSQWINLNKYKNAKFA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I +++ +V++ P A G E GLS++ E D V IP Y
Sbjct: 98 IDRLKSDGYSIVATSLSEQSVNLENFPINNKMAVFFGTELTGLSSEVLEAADLCVKIPMY 157
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD-GNKYVVAERSARQVRRSFCAE--KPES 180
G T S N++VA +IV++ + R R+ G Y++ E +R + + K
Sbjct: 158 -GFTQSYNISVAVAIVMYSLLI------RLRESGVDYLLNEVEKSNLRLKYYRQVVKNYQ 210
Query: 181 IIE 183
IIE
Sbjct: 211 IIE 213
>gi|293393635|ref|ZP_06637945.1| tRNA guanosine-2'-O-methyltransferase [Serratia odorifera DSM 4582]
gi|291423970|gb|EFE97189.1| tRNA guanosine-2'-O-methyltransferase [Serratia odorifera DSM 4582]
Length = 220
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S VN + ++ +
Sbjct: 11 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTTRMRTLVSSAAGSNSWVNVKTHRTIGE 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LKS+ I ++ AVD + + T LLG E G+S + ++ D + IP
Sbjct: 71 AVGHLKSQGMQILATNLSARAVDFRDIDYTRPTCILLGQEKSGISEEALQLADRDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|323494590|ref|ZP_08099694.1| tRNA guanosine-2'-O-methyltransferase [Vibrio brasiliensis LMG
20546]
gi|323311193|gb|EGA64353.1| tRNA guanosine-2'-O-methyltransferase [Vibrio brasiliensis LMG
20546]
Length = 227
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDARV 65
+ + K +NV + R+A A G+ ++ V + S G+ + V+ S+ +A
Sbjct: 24 LEEVHKPNNVSAVIRTADATGIHKIHAVWPNEMRTLSHTSAGARNWVDVETHDSIEEAIT 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LKS+ + ++D AVD + + K TA +LG+E +G S K ++ D + IP G
Sbjct: 84 ELKSQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSEKVGASEKAKQLADQDIIIPMI-G 142
Query: 126 GTASLNVTVAASIVLH 141
SLNV+VA++++L+
Sbjct: 143 MVQSLNVSVASAVILY 158
>gi|116073311|ref|ZP_01470573.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. RS9916]
gi|116068616|gb|EAU74368.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. RS9916]
Length = 229
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSE---MILVGR-RDFNAFGSHGSTSHVNFRH 56
M V++ ++ K HN+ + RS A G E + L GR R FN+ + GS V
Sbjct: 19 MANLTVLLEHVEKPHNLSAILRSCDAVGALEAHAVSLQGRPRTFNS-TAQGSQKWVPLYD 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
S DA LK+K + G + NA D F TAF+LG E GLS ++ D
Sbjct: 78 HPSTEDAVQQLKAKGFKLYGTHLGVNAKDYRDCDFTGPTAFVLGAEKWGLSDTARDLMDE 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
V+IP G SLNV+VAA+ +L
Sbjct: 138 AVFIPMT-GMVQSLNVSVAAATLL 160
>gi|383763830|ref|YP_005442812.1| putative RNA methyltransferase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384098|dbj|BAM00915.1| putative RNA methyltransferase [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 255
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
+++ ++ N+GTL R+A A GV +I+ RR + S G+ H+ +
Sbjct: 104 LLILDHLQDPQNLGTLIRTAEAVGVHGVIIPERRAARITPAVSNASAGAVEHLAVAQVVN 163
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
++ LK ++ I G++ + + Q + A ++GNEG GLS E CDF V
Sbjct: 164 INRVIEDLKKRNVWIVGLDGDPSTPPLAQVQLDGALAIVVGNEGEGLSRLTREKCDFLVR 223
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
+P G SLN VA SIVL+
Sbjct: 224 LPMR-GRVESLNAAVAGSIVLY 244
>gi|383450622|ref|YP_005357343.1| tRNA/rRNA methyltransferase [Flavobacterium indicum GPTSA100-9]
gi|380502244|emb|CCG53286.1| Probable tRNA/rRNA methyltransferase [Flavobacterium indicum
GPTSA100-9]
Length = 166
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 10/146 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR------RDFNAFGSHGSTSHVNFRHFHS 59
V+ I + N+G++ R AFGV +++L G+ R N S + V + +
Sbjct: 19 VICDGIYFQENIGSVFRLCDAFGVKDIVLSGKNLIFSERKINK-TSRSTHKTVPYTIIYD 77
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPF--KKSTAFLLGNEGMGLSAKECEICDFF 117
F+KS I G+EIT+N++ + + F K TA ++G+E +G+S + C
Sbjct: 78 KEKLISFIKSNFEQILGIEITNNSIPLNKFEFDSSKKTALIIGSEVVGISDELLNCCQNT 137
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
++IP +G +S+NVT A SIVL+ F
Sbjct: 138 IHIPMHGIN-SSMNVTHALSIVLYTF 162
>gi|418643844|ref|ZP_13205999.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-55]
gi|375027270|gb|EHS20635.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-55]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|188579486|ref|YP_001922931.1| RNA methyltransferase [Methylobacterium populi BJ001]
gi|179342984|gb|ACB78396.1| RNA methyltransferase, TrmH family, group 3 [Methylobacterium
populi BJ001]
Length = 269
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+ + I HNVG + R+A AFGV+ ++ R NA G + G HV +
Sbjct: 120 LLALDQITDPHNVGAIVRTAAAFGVTAIVTTARHSPNATGVLAKSASGGLEHVPLVIVRN 179
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L++A + L + G++ +D + ++ +LG EG GL + E CD V
Sbjct: 180 LAEALITLGERGFTRIGLD-SDAGTSLDAVGPRRPAVLVLGAEGKGLRQRTTECCDLLVR 238
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
I G SLNV+ AA+I L+
Sbjct: 239 I-DATGAIRSLNVSNAAAITLYAL 261
>gi|379020302|ref|YP_005296964.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus aureus
subsp. aureus M013]
gi|418950131|ref|ZP_13502333.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-160]
gi|359829611|gb|AEV77589.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus aureus
subsp. aureus M013]
gi|375377655|gb|EHS81106.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-160]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|416846018|ref|ZP_11906361.1| tRNA/rRNA methyltransferase [Staphylococcus aureus O46]
gi|323443096|gb|EGB00716.1| tRNA/rRNA methyltransferase [Staphylococcus aureus O46]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|257432651|ref|ZP_05609011.1| rRNA methylase [Staphylococcus aureus subsp. aureus E1410]
gi|257282066|gb|EEV12201.1| rRNA methylase [Staphylococcus aureus subsp. aureus E1410]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|15923521|ref|NP_371055.1| tRNA/rRNA methyltransferase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926209|ref|NP_373742.1| hypothetical protein SA0490 [Staphylococcus aureus subsp. aureus
N315]
gi|21282216|ref|NP_645304.1| hypothetical protein MW0487 [Staphylococcus aureus subsp. aureus
MW2]
gi|49482761|ref|YP_039985.1| SpoU rRNA methylase [Staphylococcus aureus subsp. aureus MRSA252]
gi|49485396|ref|YP_042617.1| SpoU rRNA methylase family protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|82750239|ref|YP_415980.1| tRNA/rRNA methyltransferase [Staphylococcus aureus RF122]
gi|148266991|ref|YP_001245934.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus JH9]
gi|150393038|ref|YP_001315713.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus JH1]
gi|156978860|ref|YP_001441119.1| hypothetical protein SAHV_0529 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253315641|ref|ZP_04838854.1| hypothetical protein SauraC_05752 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
gi|253731136|ref|ZP_04865301.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253732539|ref|ZP_04866704.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus TCH130]
gi|255005325|ref|ZP_05143926.2| hypothetical protein SauraM_02620 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|257424645|ref|ZP_05601072.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257427313|ref|ZP_05603712.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257429949|ref|ZP_05606333.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus 68-397]
gi|257435555|ref|ZP_05611603.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus M876]
gi|257795370|ref|ZP_05644349.1| RNA methyltransferase [Staphylococcus aureus A9781]
gi|258408943|ref|ZP_05681224.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
A9763]
gi|258420419|ref|ZP_05683362.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
A9719]
gi|258422622|ref|ZP_05685528.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A9635]
gi|258439340|ref|ZP_05690272.1| RNA methyltransferase [Staphylococcus aureus A9299]
gi|258444080|ref|ZP_05692417.1| RNA methyltransferase [Staphylococcus aureus A8115]
gi|258446348|ref|ZP_05694506.1| SpoU rRNA methylase [Staphylococcus aureus A6300]
gi|258448441|ref|ZP_05696556.1| SpoU rRNA methylase [Staphylococcus aureus A6224]
gi|258453797|ref|ZP_05701771.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A5937]
gi|269202154|ref|YP_003281423.1| RNA methyltransferase, TrmH family [Staphylococcus aureus subsp.
aureus ED98]
gi|282894966|ref|ZP_06303189.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A8117]
gi|282903119|ref|ZP_06311010.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus C160]
gi|282904909|ref|ZP_06312767.1| RNA methyltransferase TrmH family group 3 [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282910172|ref|ZP_06317976.1| tRNA/rRNA methyltransferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913364|ref|ZP_06321153.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus M899]
gi|282915854|ref|ZP_06323619.1| RNA methyltransferase, TrmH family, group 3 protein [Staphylococcus
aureus subsp. aureus D139]
gi|282918319|ref|ZP_06326056.1| RNA methyltransferase, TrmH family, group 3 protein [Staphylococcus
aureus subsp. aureus C427]
gi|282923281|ref|ZP_06330961.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus C101]
gi|282928868|ref|ZP_06336459.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A10102]
gi|283769687|ref|ZP_06342579.1| RNA methyltransferase TrmH family protein [Staphylococcus aureus
subsp. aureus H19]
gi|283957329|ref|ZP_06374782.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus A017934/97]
gi|293500410|ref|ZP_06666261.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 58-424]
gi|293509355|ref|ZP_06668066.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus M809]
gi|293523942|ref|ZP_06670629.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus M1015]
gi|295406908|ref|ZP_06816711.1| RNA methyltransferase [Staphylococcus aureus A8819]
gi|295427069|ref|ZP_06819705.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296275777|ref|ZP_06858284.1| RNA methyltransferase, TrmH family protein [Staphylococcus aureus
subsp. aureus MR1]
gi|297208755|ref|ZP_06925183.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297246268|ref|ZP_06930117.1| RNA methyltransferase [Staphylococcus aureus A8796]
gi|297590578|ref|ZP_06949217.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus MN8]
gi|300912845|ref|ZP_07130287.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus TCH70]
gi|384863860|ref|YP_005749219.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384868544|ref|YP_005748740.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus TCH60]
gi|386728289|ref|YP_006194672.1| 23S rRNA Gm2251-methyltransferase [Staphylococcus aureus subsp.
aureus 71193]
gi|386830175|ref|YP_006236829.1| SpoU rRNA methylase family protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387149692|ref|YP_005741256.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus aureus
04-02981]
gi|387601886|ref|YP_005733407.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus ST398]
gi|387779671|ref|YP_005754469.1| SpoU rRNA methylase family protein [Staphylococcus aureus subsp.
aureus LGA251]
gi|404477918|ref|YP_006709348.1| SpoU rRNA methylase family protein [Staphylococcus aureus
08BA02176]
gi|415684087|ref|ZP_11449242.1| hypothetical protein CGSSa00_12717 [Staphylococcus aureus subsp.
aureus CGS00]
gi|415694006|ref|ZP_11455611.1| hypothetical protein CGSSa03_13067 [Staphylococcus aureus subsp.
aureus CGS03]
gi|416840766|ref|ZP_11903953.1| tRNA/rRNA methyltransferase [Staphylococcus aureus O11]
gi|417650777|ref|ZP_12300542.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21172]
gi|417654136|ref|ZP_12303863.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21193]
gi|417796781|ref|ZP_12443985.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21305]
gi|417798493|ref|ZP_12445659.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21310]
gi|417801390|ref|ZP_12448483.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21318]
gi|417889329|ref|ZP_12533420.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21195]
gi|417890361|ref|ZP_12534438.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21200]
gi|417893548|ref|ZP_12537574.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21201]
gi|417895960|ref|ZP_12539936.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21235]
gi|417899751|ref|ZP_12543652.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21259]
gi|417902897|ref|ZP_12546758.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21269]
gi|418282557|ref|ZP_12895322.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21202]
gi|418308155|ref|ZP_12919808.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21194]
gi|418310643|ref|ZP_12922179.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21331]
gi|418312796|ref|ZP_12924304.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21334]
gi|418315385|ref|ZP_12926849.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21340]
gi|418320345|ref|ZP_12931706.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus VCU006]
gi|418423704|ref|ZP_12996851.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426648|ref|ZP_12999674.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429574|ref|ZP_13002505.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432469|ref|ZP_13005269.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436183|ref|ZP_13008000.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439082|ref|ZP_13010803.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442062|ref|ZP_13013679.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445190|ref|ZP_13016681.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448130|ref|ZP_13019535.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS9]
gi|418450954|ref|ZP_13022296.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS10]
gi|418453971|ref|ZP_13025244.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418456875|ref|ZP_13028090.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS11b]
gi|418559661|ref|ZP_13124196.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21252]
gi|418566793|ref|ZP_13131161.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21272]
gi|418581207|ref|ZP_13145290.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418595417|ref|ZP_13159031.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21342]
gi|418601618|ref|ZP_13165038.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21345]
gi|418639515|ref|ZP_13201760.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-3]
gi|418654843|ref|ZP_13216736.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-99]
gi|418656931|ref|ZP_13218715.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-105]
gi|418662550|ref|ZP_13224094.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-122]
gi|418874549|ref|ZP_13428815.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877381|ref|ZP_13431620.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880238|ref|ZP_13434458.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883165|ref|ZP_13437365.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418885825|ref|ZP_13439975.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418888432|ref|ZP_13442569.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418891135|ref|ZP_13445252.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418893991|ref|ZP_13448092.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418896917|ref|ZP_13450990.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418899881|ref|ZP_13453940.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418908286|ref|ZP_13462294.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|418913722|ref|ZP_13467695.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916341|ref|ZP_13470304.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418919347|ref|ZP_13473293.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418922164|ref|ZP_13476081.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418930561|ref|ZP_13484409.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418933462|ref|ZP_13487286.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418980358|ref|ZP_13528141.1| 23S rRNA Gm2251 methyltransferase [Staphylococcus aureus subsp.
aureus DR10]
gi|418981399|ref|ZP_13529114.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985032|ref|ZP_13532722.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|418987432|ref|ZP_13535105.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|418990426|ref|ZP_13538087.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|418993246|ref|ZP_13540885.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|419785942|ref|ZP_14311686.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-M]
gi|424775951|ref|ZP_18202938.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus CM05]
gi|443637219|ref|ZP_21121304.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21236]
gi|443638259|ref|ZP_21122306.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21196]
gi|448741474|ref|ZP_21723438.1| tRNA/rRNA methyltransferase [Staphylococcus aureus KT/314250]
gi|448743998|ref|ZP_21725903.1| tRNA/rRNA methyltransferase [Staphylococcus aureus KT/Y21]
gi|81649904|sp|Q6GBV6.1|TRMHL_STAAS RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|81651699|sp|Q6GJD7.1|TRMHL_STAAR RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|81704678|sp|Q7A1Q9.1|TRMHL_STAAW RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|81706174|sp|Q7A794.1|TRMHL_STAAN RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|81782082|sp|Q99W72.1|TRMHL_STAAM RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|13700422|dbj|BAB41720.1| SA0490 [Staphylococcus aureus subsp. aureus N315]
gi|14246299|dbj|BAB56693.1| putative tRNA/rRNA methyltransferase [Staphylococcus aureus subsp.
aureus Mu50]
gi|21203652|dbj|BAB94352.1| MW0487 [Staphylococcus aureus subsp. aureus MW2]
gi|49240890|emb|CAG39557.1| SpoU rRNA Methylase family protein [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49243839|emb|CAG42264.1| SpoU rRNA Methylase family protein [Staphylococcus aureus subsp.
aureus MSSA476]
gi|82655770|emb|CAI80170.1| probable tRNA/rRNA methyltransferase [Staphylococcus aureus RF122]
gi|147740060|gb|ABQ48358.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus JH9]
gi|149945490|gb|ABR51426.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus JH1]
gi|156720995|dbj|BAF77412.1| hypothetical protein SAHV_0529 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253725101|gb|EES93830.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253729468|gb|EES98197.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus TCH130]
gi|257272215|gb|EEV04338.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 55/2053]
gi|257275506|gb|EEV06979.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 65-1322]
gi|257279146|gb|EEV09747.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus 68-397]
gi|257284746|gb|EEV14865.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus M876]
gi|257789342|gb|EEV27682.1| RNA methyltransferase [Staphylococcus aureus A9781]
gi|257840294|gb|EEV64757.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
A9763]
gi|257843609|gb|EEV68015.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
A9719]
gi|257847194|gb|EEV71202.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A9635]
gi|257847677|gb|EEV71676.1| RNA methyltransferase [Staphylococcus aureus A9299]
gi|257850750|gb|EEV74695.1| RNA methyltransferase [Staphylococcus aureus A8115]
gi|257854942|gb|EEV77887.1| SpoU rRNA methylase [Staphylococcus aureus A6300]
gi|257858310|gb|EEV81197.1| SpoU rRNA methylase [Staphylococcus aureus A6224]
gi|257864053|gb|EEV86807.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A5937]
gi|262074444|gb|ACY10417.1| RNA methyltransferase, TrmH family [Staphylococcus aureus subsp.
aureus ED98]
gi|282314149|gb|EFB44539.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus C101]
gi|282317453|gb|EFB47825.1| RNA methyltransferase, TrmH family, group 3 protein [Staphylococcus
aureus subsp. aureus C427]
gi|282320150|gb|EFB50495.1| RNA methyltransferase, TrmH family, group 3 protein [Staphylococcus
aureus subsp. aureus D139]
gi|282322396|gb|EFB52718.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus M899]
gi|282325564|gb|EFB55872.1| tRNA/rRNA methyltransferase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282331734|gb|EFB61245.1| RNA methyltransferase TrmH family group 3 [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282589476|gb|EFB94565.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A10102]
gi|282596074|gb|EFC01035.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus C160]
gi|282762648|gb|EFC02785.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A8117]
gi|283459834|gb|EFC06924.1| RNA methyltransferase TrmH family protein [Staphylococcus aureus
subsp. aureus H19]
gi|283469824|emb|CAQ49035.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus ST398]
gi|283790780|gb|EFC29595.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus A017934/97]
gi|285816231|gb|ADC36718.1| TrmH family tRNA/rRNA methyltransferase YacO [Staphylococcus aureus
04-02981]
gi|290920905|gb|EFD97966.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus M1015]
gi|291095415|gb|EFE25676.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 58-424]
gi|291467452|gb|EFF09967.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus M809]
gi|294968139|gb|EFG44165.1| RNA methyltransferase [Staphylococcus aureus A8819]
gi|295128857|gb|EFG58487.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886700|gb|EFH25605.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297176866|gb|EFH36124.1| RNA methyltransferase [Staphylococcus aureus A8796]
gi|297576877|gb|EFH95592.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus MN8]
gi|300885949|gb|EFK81152.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus TCH70]
gi|312439049|gb|ADQ78120.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus TCH60]
gi|312829027|emb|CBX33869.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128824|gb|EFT84823.1| hypothetical protein CGSSa03_13067 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315193895|gb|EFU24289.1| hypothetical protein CGSSa00_12717 [Staphylococcus aureus subsp.
aureus CGS00]
gi|323439802|gb|EGA97519.1| tRNA/rRNA methyltransferase [Staphylococcus aureus O11]
gi|329727899|gb|EGG64348.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21172]
gi|329731950|gb|EGG68306.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21193]
gi|334268167|gb|EGL86612.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21305]
gi|334275823|gb|EGL94098.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21310]
gi|334276916|gb|EGL95159.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21318]
gi|341841166|gb|EGS82629.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21235]
gi|341844359|gb|EGS85576.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21259]
gi|341850516|gb|EGS91634.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21269]
gi|341851739|gb|EGS92650.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21195]
gi|341854319|gb|EGS95190.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21201]
gi|341855088|gb|EGS95942.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21200]
gi|344176773|emb|CCC87235.1| SpoU rRNA Methylase family protein [Staphylococcus aureus subsp.
aureus LGA251]
gi|365169558|gb|EHM60804.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21202]
gi|365227531|gb|EHM68725.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus VCU006]
gi|365236347|gb|EHM77243.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21331]
gi|365237710|gb|EHM78555.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21334]
gi|365241635|gb|EHM82379.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21194]
gi|365244015|gb|EHM84683.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21340]
gi|371974504|gb|EHO91834.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21252]
gi|371983538|gb|EHP00680.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21272]
gi|374398037|gb|EHQ69235.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21345]
gi|374401556|gb|EHQ72622.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21342]
gi|375014240|gb|EHS07932.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-99]
gi|375017155|gb|EHS10777.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-3]
gi|375031931|gb|EHS25191.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-105]
gi|375036049|gb|EHS29136.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-122]
gi|377696089|gb|EHT20445.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377698339|gb|EHT22687.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377704963|gb|EHT29271.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707219|gb|EHT31512.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377708164|gb|EHT32455.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377711991|gb|EHT36214.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377716278|gb|EHT40461.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377716428|gb|EHT40610.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377719220|gb|EHT43390.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377722548|gb|EHT46673.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377727123|gb|EHT51230.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377732092|gb|EHT56143.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377732676|gb|EHT56726.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377735487|gb|EHT59517.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377747209|gb|EHT71175.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|377751693|gb|EHT75621.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754884|gb|EHT78789.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1524]
gi|377755625|gb|EHT79523.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|377758328|gb|EHT82213.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761696|gb|EHT85565.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|377767312|gb|EHT91110.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771242|gb|EHT94996.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC128]
gi|377771889|gb|EHT95642.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC93]
gi|379991886|gb|EIA13348.1| 23S rRNA Gm2251 methyltransferase [Staphylococcus aureus subsp.
aureus DR10]
gi|383361751|gb|EID39117.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-M]
gi|384229582|gb|AFH68829.1| 23S rRNA Gm2251 methyltransferase [Staphylococcus aureus subsp.
aureus 71193]
gi|385195567|emb|CCG15176.1| SpoU rRNA Methylase family protein [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|387720921|gb|EIK08812.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387721086|gb|EIK08973.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722496|gb|EIK10294.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS1]
gi|387727535|gb|EIK15048.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS4]
gi|387729543|gb|EIK16978.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS5]
gi|387731583|gb|EIK18865.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS6]
gi|387738386|gb|EIK25429.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS8]
gi|387739637|gb|EIK26633.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS9]
gi|387739799|gb|EIK26782.1| putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746902|gb|EIK33622.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS10]
gi|387748312|gb|EIK35001.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387749117|gb|EIK35761.1| trmH family tRNA/rRNA methyltransferase [Staphylococcus aureus
subsp. aureus VRS11b]
gi|402346730|gb|EJU81807.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus CM05]
gi|404439407|gb|AFR72600.1| SpoU rRNA Methylase family protein [Staphylococcus aureus
08BA02176]
gi|408422962|emb|CCJ10373.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus ST228]
gi|408424950|emb|CCJ12337.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus ST228]
gi|408426939|emb|CCJ14302.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus ST228]
gi|408428927|emb|CCJ26092.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus ST228]
gi|408430915|emb|CCJ18230.1| Putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus ST228]
gi|408432909|emb|CCJ20194.1| Putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus ST228]
gi|408434898|emb|CCJ22158.1| Putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus ST228]
gi|408436883|emb|CCJ24126.1| Putative TrmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus ST228]
gi|443406097|gb|ELS64682.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21236]
gi|443409696|gb|ELS68188.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21196]
gi|445547775|gb|ELY16037.1| tRNA/rRNA methyltransferase [Staphylococcus aureus KT/314250]
gi|445562737|gb|ELY18903.1| tRNA/rRNA methyltransferase [Staphylococcus aureus KT/Y21]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|418060257|ref|ZP_12698177.1| RNA methyltransferase, TrmH family, group 3 [Methylobacterium
extorquens DSM 13060]
gi|373566185|gb|EHP92194.1| RNA methyltransferase, TrmH family, group 3 [Methylobacterium
extorquens DSM 13060]
Length = 234
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+ + I HNVG + R+A AFGV+ ++ R NA G + G HV +
Sbjct: 85 LLALDQITDPHNVGAIVRTAAAFGVTAIVTTARHSPNATGVLAKSASGGLEHVPLVIVRN 144
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L++A + L + G++ +D + ++ +LG EG GL + E CD V
Sbjct: 145 LAEALITLGERGFTRIGLD-SDAGTTLDAVGPRRPAVLVLGAEGKGLRQRTTECCDLLVR 203
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAG 148
I G SLNV+ AA+I L+ AG
Sbjct: 204 I-DATGAIRSLNVSNAAAITLYALTRSAG 231
>gi|296100480|ref|YP_003610626.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295054939|gb|ADF59677.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 206
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ + K HNV + R+A A GV E+ V R A + GS S V+ + ++ +A
Sbjct: 1 MEQVHKPHNVSAIVRTADAVGVHEVHAVWPGARMRTMASTAAGSNSWVSVKTHQTIGEAV 60
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
LK + I ++ AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 61 SHLKGRGMQILATNLSAKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPMI- 119
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 120 GMVQSLNVSVASALILY 136
>gi|358061011|ref|ZP_09147697.1| RNA methyltransferase, TrmH family protein [Staphylococcus simiae
CCM 7213]
gi|357256534|gb|EHJ06896.1| RNA methyltransferase, TrmH family protein [Staphylococcus simiae
CCM 7213]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIQHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L++ LK+ + G E NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLANTIDELKNNGFWVAGAE-AHNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|427723345|ref|YP_007070622.1| tRNA guanosine-2'-O-methyltransferase [Leptolyngbya sp. PCC 7376]
gi|427355065|gb|AFY37788.1| tRNA guanosine-2'-O-methyltransferase [Leptolyngbya sp. PCC 7376]
Length = 220
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM----ILVGRRDFNAFG--SHGSTSHVNFRHFHS 59
V+ ++ K HN+ + R+ A GV E+ +V D F + GS V +
Sbjct: 22 VLTEDVHKPHNLSAIIRTCDAVGVFEVHAMNKVVDGEDLPTFTQVAQGSEKWVELHRHTT 81
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ A L+++D I ++D AVD + + + TA L+G E G+S + D +
Sbjct: 82 IEGAIAQLQARDFKIYAAHLSDRAVDYREIDYTQPTAVLMGAERWGVSESTADAVDGHII 141
Query: 120 IPQYGGGTASLNVTVAASIVL---HHFGVWAGFSERTRDGNK 158
IP G SLNV+VAA++VL + AGF ++ R K
Sbjct: 142 IPML-GMVQSLNVSVAAAVVLFEAQRQRLEAGFYQQPRLDEK 182
>gi|50119000|ref|YP_048167.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium atrosepticum
SCRI1043]
gi|49609526|emb|CAG72959.1| putative tRNA (guanosine-2'-O)-methyltransferase [Pectobacterium
atrosepticum SCRI1043]
Length = 230
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HN+ + R+A A GV ++ + R + GS S V + ++ D
Sbjct: 22 ICMEQVHKPHNISAVIRTADAVGVHQVHAIWPTSRMKTLVSSAAGSNSWVQVKTHRTIQD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++++AVD + + + T LLG E G++A+ ++ D + IP
Sbjct: 82 AVGHLKNEGMQVLATNLSEHAVDFREIDYTRPTCILLGQEKTGITAEALKLADRDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|271502622|ref|YP_003335648.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech586]
gi|270346177|gb|ACZ78942.1| tRNA guanosine-2'-O-methyltransferase [Dickeya dadantii Ech586]
Length = 230
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPTSRMKTLVSTAAGSNSWVQVKTHRTIQD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++ +AVD + + T LLG E G+S + + D + IP
Sbjct: 82 AARHLKTQGMQILATNLSADAVDFRDVDYTRPTCILLGQEKTGISGEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|384549396|ref|YP_005738648.1| TrmH family RNA methyltransferase [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302332245|gb|ADL22438.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus JKD6159]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDDLKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|384546812|ref|YP_005736065.1| rRNA methylase [Staphylococcus aureus subsp. aureus ED133]
gi|298693863|gb|ADI97085.1| rRNA methylase [Staphylococcus aureus subsp. aureus ED133]
Length = 248
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDDLKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|418658743|ref|ZP_13220452.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-111]
gi|375037643|gb|EHS30662.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-111]
Length = 154
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 2 TVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVT 61
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+L+ LK + G E +NA D S A ++G+EG G+S + CDF++
Sbjct: 62 NLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYI 120
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
IP G SLN +VAAS++++
Sbjct: 121 KIPMV-GHVNSLNASVAASLMMYEV 144
>gi|125974550|ref|YP_001038460.1| RNA methyltransferase [Clostridium thermocellum ATCC 27405]
gi|256004091|ref|ZP_05429076.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum DSM 2360]
gi|281419074|ref|ZP_06250091.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum JW20]
gi|385779988|ref|YP_005689153.1| TrmH family RNA methyltransferase [Clostridium thermocellum DSM
1313]
gi|419721333|ref|ZP_14248497.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum AD2]
gi|419726889|ref|ZP_14253909.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum YS]
gi|125714775|gb|ABN53267.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum ATCC 27405]
gi|255992014|gb|EEU02111.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum DSM 2360]
gi|281407223|gb|EFB37484.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum JW20]
gi|316941668|gb|ADU75702.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum DSM 1313]
gi|380769854|gb|EIC03754.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum YS]
gi|380782503|gb|EIC12137.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
thermocellum AD2]
Length = 277
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAF---GSHGSTSHVNFRHFHSL 60
+++ I +N+G++ R+A A G +++ RR NA S G+ +V ++
Sbjct: 131 IILDGITDAYNLGSILRTADAVGAHGVVIPKRRAIGLNAAVSKASAGAIEYVPVARVTNI 190
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPF-----KKSTAFLLGNEGMGLSAKECEICD 115
S +LK K+ I G +++ + PF K A ++G+EG G+ E CD
Sbjct: 191 SQTIEYLKKKNIWIVGTDLS------GEKPFFEADLKGPVALVIGSEGEGMGRLVSEKCD 244
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
F V IP G +SLN VAA+I+++
Sbjct: 245 FIVNIPMQ-GKISSLNAAVAAAIIMYEI 271
>gi|343515614|ref|ZP_08752666.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sp. N418]
gi|342798045|gb|EGU33678.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sp. N418]
Length = 227
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDARV 65
+ + K +NV + R+A A G+ ++ V S G+ + V S+ DA
Sbjct: 24 LEEVHKPNNVSAVIRTADATGIHKIHAVWPAKMRTLTHTSAGARNWVEVDTHSSIDDAIG 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LK++ I ++D AVD Q + K TA +LG+E +G SA+ E+ D + IP G
Sbjct: 84 ELKAQGMQILVTNLSDTAVDFRQIDYTKPTAIILGSEKVGASARAKELADQDIIIPMM-G 142
Query: 126 GTASLNVTVAASIVLHH 142
SLNV+VA++++++
Sbjct: 143 MVQSLNVSVASAVIMYE 159
>gi|387891167|ref|YP_006321465.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia blattae DSM
4481]
gi|414594487|ref|ZP_11444123.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia blattae
NBRC 105725]
gi|386926000|gb|AFJ48954.1| tRNA (guanosine-2'-O-)-methyltransferase [Escherichia blattae DSM
4481]
gi|403194482|dbj|GAB81775.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Escherichia blattae
NBRC 105725]
Length = 229
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V + +++D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGNRMRTMASAAAGSNSWVEVKTHPTIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + T L+G E G++ + + D + IP
Sbjct: 82 AVSELKRQGMQILATHLSPGAVDFRDIDYTRPTCILMGQEKTGITREALSLADQDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MTGMVQSLNVSVASALILY 159
>gi|410612673|ref|ZP_11323749.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola psychrophila
170]
gi|410167786|dbj|GAC37638.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola psychrophila
170]
Length = 229
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG--RRDFNAFGSHGSTSHVNFRHFHSLSDA 63
+ + + K HNV + RS A GV E+ V + +F + GS + V + + DA
Sbjct: 22 LCLEQLHKPHNVSAIVRSCDAVGVYEVHAVWNEKPEFRKSTAMGSENWVYTKEHSCIEDA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK++D + +++NAVD + + TA +LG E G + + D + IP
Sbjct: 82 VDHLKTQDMQVLVTNLSENAVDFREIDYTLPTAIILGQEKHGATQEAVAAADQDIIIPMV 141
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA+++L+
Sbjct: 142 -GMVQSLNVSVAAALILY 158
>gi|418566000|ref|ZP_13130389.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21264]
gi|371971874|gb|EHO89266.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21264]
Length = 248
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|418561563|ref|ZP_13126051.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21262]
gi|371977420|gb|EHO94691.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21262]
Length = 246
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 92 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 151
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 152 VTNLAKTIDDLKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 210
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 211 YIKIPMV-GHVNSLNASVAASLMMY 234
>gi|433448945|ref|ZP_20411810.1| tRNA/rRNA methyltransferase [Weissella ceti NC36]
gi|429539334|gb|ELA07371.1| tRNA/rRNA methyltransferase [Weissella ceti NC36]
Length = 295
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ +I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 148 FLILDSIEDPHNLGSILRTADAAGVHGIIIPKRRAVQLTSVVAKTSTGAIEHVPVTRVTN 207
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK + + G ++ N D Q K +TA ++GNEG G+S + D +
Sbjct: 208 LVQTVTELKKRGLWVYGTDM--NGKDYRQWDAKGATALVIGNEGKGISPLLKKAMDETLT 265
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GF+ R
Sbjct: 266 IPMV-GHVQSLNASVAASLLIYQ-----GFNSR 292
>gi|354616264|ref|ZP_09033924.1| tRNA/rRNA methyltransferase (SpoU) [Saccharomonospora
paurometabolica YIM 90007]
gi|353219380|gb|EHB83959.1| tRNA/rRNA methyltransferase (SpoU) [Saccharomonospora
paurometabolica YIM 90007]
Length = 173
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 20/159 (12%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLS---- 61
VV HNI HNVG+L R+ FG+ + + G + + + L+
Sbjct: 15 VVAHNIRSAHNVGSLLRTGEFFGLDRVWVTGFSPYPTYADDPRDPRLRDLQTRRLAKAAA 74
Query: 62 ------------DARVFLKSKDCD---ICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGL 106
D + L+S D + G+E+ AV +T + A +LG+E G+
Sbjct: 75 GAERTMPFDRHDDVQALLESLRADGYTVVGLELDPTAVPLTDYAPPARVALVLGDEVAGI 134
Query: 107 SAKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHFGV 145
+ + + CD V I +G +LNV+VAA I LHH V
Sbjct: 135 TPEIRDACDRLVEIRSHGRKD-TLNVSVAAGIALHHLRV 172
>gi|406595104|ref|YP_006746234.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii ATCC
27126]
gi|406372425|gb|AFS35680.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii ATCC
27126]
Length = 235
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHSLSDA 63
V + N+ K HNV + R+ A G+ + V + F + GS V + +++DA
Sbjct: 22 VCLENVHKPHNVSAVVRTCDAVGIHRVHTVWEKKYQFRRGTAMGSQQWVRQTNHDNINDA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK + + ++D AVD + K TA L G E G S + I D + IP
Sbjct: 82 MAELKGQGMQVLVTHLSDTAVDFRDIDYTKPTAILFGQEKYGASDEAKAIADQDIVIPMM 141
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 142 -GMVQSLNVSVAAALVLY 158
>gi|334564199|ref|ZP_08517190.1| putative RNA methyltransferase [Corynebacterium bovis DSM 20582]
Length = 247
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF V + +VGRR +N G+ + + + RH ++
Sbjct: 99 HVAIENFGNDANIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLRHHADVAGVL 158
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F ++ + V+ T +V + + L G EG G++ + V I Q+
Sbjct: 159 EFARAHGLTVVAVDNTPGSVPLETTDLPERCLLLFGQEGPGVTEAARDGAALTVSIAQF- 217
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 218 GSTRSVNAGVAAGIAMHAW 236
>gi|392976992|ref|YP_006475580.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392322925|gb|AFM57878.1| tRNA guanosine-2'-O-methyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 229
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS S V+ + ++ +
Sbjct: 22 VCMEQVHKPHNVSAIVRTADAVGVHEVHAVWPGTRMRTMASTAAGSNSWVSVKTHQTIGE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ AVD + + + T L+G E G++ + ++ D + IP
Sbjct: 82 AVSHLKGRGMQVLATNLSAKAVDFREIDYTRPTCILMGQEKTGITQEALDLADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|384206553|ref|YP_005592274.1| spoU rRNA methylase family protein [Borrelia afzelii PKo]
gi|342856436|gb|AEL69284.1| spoU rRNA Methylase family protein [Borrelia afzelii PKo]
Length = 218
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + HN R+ G+S++ ++ + + N + GS+ +N + + A
Sbjct: 38 VLEDIVQSHNASATIRTGEILGLSDIYVIDKNNKYTLNPDITLGSSQWINLNKYKNAKFA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I +++ +V++ P A G E GLS++ E D + IP Y
Sbjct: 98 IDRLKSDGYSIVATSLSEQSVNLENFPINNKMAVFFGTELTGLSSEVLEAADLCIKIPMY 157
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD-GNKYVVAERSARQVRRSFCAE--KPES 180
G T S N++VA +IV++ + R R+ G Y++ E +R + + K
Sbjct: 158 -GFTQSYNISVAVAIVMYSLLI------RLRESGVDYLLNEVEKSNLRLKYYRQVVKNYQ 210
Query: 181 IIE 183
IIE
Sbjct: 211 IIE 213
>gi|90962219|ref|YP_536135.1| tRNA/rRNA methyltransferase [Lactobacillus salivarius UCC118]
gi|301299870|ref|ZP_07206104.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|385840760|ref|YP_005864084.1| TRNA/rRNA methyltransferase [Lactobacillus salivarius CECT 5713]
gi|417788562|ref|ZP_12436245.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
salivarius NIAS840]
gi|417809916|ref|ZP_12456597.1| tRNA/rRNA methyltransferase [Lactobacillus salivarius GJ-24]
gi|418961727|ref|ZP_13513612.1| tRNA/rRNA methyltransferase [Lactobacillus salivarius SMXD51]
gi|90821413|gb|ABE00052.1| TRNA/rRNA methyltransferase [Lactobacillus salivarius UCC118]
gi|300214881|gb|ADJ79297.1| TRNA/rRNA methyltransferase [Lactobacillus salivarius CECT 5713]
gi|300852541|gb|EFK80191.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|334308739|gb|EGL99725.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
salivarius NIAS840]
gi|335350840|gb|EGM52336.1| tRNA/rRNA methyltransferase [Lactobacillus salivarius GJ-24]
gi|380343822|gb|EIA32170.1| tRNA/rRNA methyltransferase [Lactobacillus salivarius SMXD51]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 102 FLILDGIEDPHNLGSIMRTADAAGVHGIIIPKRRAVQLTSVVAKTSTGAIEHVPVVRVTN 161
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK + I G ++ D + K +TA ++GNEG G+S + CD +
Sbjct: 162 LVQTVKELKEQGVWIFGTDM--KGTDFRKWSAKGATALVIGNEGKGISPLLKKTCDEMLT 219
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GF+ R
Sbjct: 220 IPMV-GHVQSLNASVAASLLIYQ-----GFTSR 246
>gi|384440253|ref|YP_005654977.1| tRNA guanosine-2'-O-methyltransferase [Thermus sp. CCB_US3_UF1]
gi|359291386|gb|AEV16903.1| tRNA guanosine-2'-O-methyltransferase [Thermus sp. CCB_US3_UF1]
Length = 191
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V++ N+ K HN+ + RS A GV E V G FN S GS V R ++
Sbjct: 22 VLLENVHKPHNLSAILRSCDAVGVLEAHAVNPTGGVPTFNE-TSGGSHKWVYLRVHPDIA 80
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+A FL+ + + ++ A D + + + TA LLG E G+S + + D + IP
Sbjct: 81 EAFRFLRERGFRVYATALSREAQDYREVDYTQPTAILLGAEKWGVSPEALALADGAIQIP 140
Query: 122 QYGGGTASLNVTVAASIVL---HHFGVWAGFSERTR 154
G SLNV+VAA+++L + AG ER R
Sbjct: 141 ML-GMVQSLNVSVAAAVILFEAQRQRLRAGLYERPR 175
>gi|117923731|ref|YP_864348.1| RNA methyltransferase [Magnetococcus marinus MC-1]
gi|117607487|gb|ABK42942.1| 23S rRNA Gm-2251 2'-O-methyltransferase [Magnetococcus marinus
MC-1]
Length = 246
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNA---FGSHGSTSHVNFRHFHS 59
V++ + HN+G + RSA AFG +IL R NA S G+ ++ +
Sbjct: 98 LVILDGVEDPHNLGAIMRSAEAFGALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVTN 157
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ A L+ ++ + G+ A + K A ++GNEG GL E CD
Sbjct: 158 LARAIEQLQQRNVWVIGLAGEAGAPLIGTLDCKGPLALVMGNEGSGLRRLTRERCDQLAA 217
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP GGG SLNV+VA + L+
Sbjct: 218 IP-MGGGVGSLNVSVATGVALYEV 240
>gi|150392179|ref|YP_001322228.1| RNA methyltransferase [Alkaliphilus metalliredigens QYMF]
gi|149952041|gb|ABR50569.1| RNA methyltransferase, TrmH family, group 3 [Alkaliphilus
metalliredigens QYMF]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I HN+G++ R+A A GV +I+ RR A S G+ +V ++
Sbjct: 99 LILDEIMDPHNLGSIIRTADAVGVDGIIIPKRRAVGLTAVVAKTSAGAIEYVPVAKVSNI 158
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S LK K + G ++ + + FK + A ++G EG G+S E CDF V +
Sbjct: 159 SQTIDKLKEKGVWVAGADMKGKQLHF-EADFKGALALVIGGEGSGISRLVKEKCDFLVKL 217
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G +SLN +VAA+++++
Sbjct: 218 P-MAGQVSSLNASVAAAVLMYE 238
>gi|111114873|ref|YP_709491.1| spoU protein [Borrelia afzelii PKo]
gi|110890147|gb|ABH01315.1| spoU protein [Borrelia afzelii PKo]
Length = 222
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + HN R+ G+S++ ++ + + N + GS+ +N + + A
Sbjct: 42 VLEDIVQSHNASATIRTGEILGLSDIYVIDKNNKYTLNPDITLGSSQWINLNKYKNAKFA 101
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I +++ +V++ P A G E GLS++ E D + IP Y
Sbjct: 102 IDRLKSDGYSIVATSLSEQSVNLENFPINNKMAVFFGTELTGLSSEVLEAADLCIKIPMY 161
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD-GNKYVVAERSARQVRRSFCAE--KPES 180
G T S N++VA +IV++ + R R+ G Y++ E +R + + K
Sbjct: 162 -GFTQSYNISVAVAIVMYSLLI------RLRESGVDYLLNEVEKSNLRLKYYRQVVKNYQ 214
Query: 181 IIE 183
IIE
Sbjct: 215 IIE 217
>gi|57651408|ref|YP_185464.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus COL]
gi|87162210|ref|YP_493220.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194294|ref|YP_499086.1| hypothetical protein SAOUHSC_00513 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|151220706|ref|YP_001331528.1| hypothetical protein NWMN_0494 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|161508771|ref|YP_001574430.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141032|ref|ZP_03565525.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|262049574|ref|ZP_06022443.1| hypothetical protein SAD30_0368 [Staphylococcus aureus D30]
gi|282924445|ref|ZP_06332117.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A9765]
gi|284023541|ref|ZP_06377939.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus 132]
gi|294850307|ref|ZP_06791041.1| RNA methyltransferase [Staphylococcus aureus A9754]
gi|304381870|ref|ZP_07364517.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379013813|ref|YP_005290049.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus VC40]
gi|384861194|ref|YP_005743914.1| TrmH family RNA methyltransferase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384869117|ref|YP_005751831.1| Putative trmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus T0131]
gi|387142221|ref|YP_005730614.1| SpoU rRNA methylase family protein [Staphylococcus aureus subsp.
aureus TW20]
gi|415688903|ref|ZP_11452418.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus CGS01]
gi|417648368|ref|ZP_12298194.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21189]
gi|417902208|ref|ZP_12546077.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21266]
gi|418279362|ref|ZP_12892725.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21178]
gi|418286153|ref|ZP_12898804.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21209]
gi|418318101|ref|ZP_12929515.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21232]
gi|418569661|ref|ZP_13133980.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21283]
gi|418578422|ref|ZP_13142517.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418642056|ref|ZP_13204257.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-24]
gi|418646220|ref|ZP_13208331.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-88]
gi|418651250|ref|ZP_13213258.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-91]
gi|418871548|ref|ZP_13425924.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-125]
gi|418902795|ref|ZP_13456836.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418905100|ref|ZP_13459129.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418911200|ref|ZP_13465183.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|418924759|ref|ZP_13478662.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418927847|ref|ZP_13481733.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418949181|ref|ZP_13501440.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-157]
gi|418954672|ref|ZP_13506628.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-189]
gi|419774851|ref|ZP_14300805.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus CO-23]
gi|422744668|ref|ZP_16798623.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus MRSA177]
gi|422745097|ref|ZP_16799043.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus MRSA131]
gi|424784385|ref|ZP_18211195.1| 23S rRNA (guanosine-2'-O-) -methyltransferase [Staphylococcus
aureus CN79]
gi|440707548|ref|ZP_20888243.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21282]
gi|440734006|ref|ZP_20913619.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|75410372|sp|Q9AGT0.1|TRMHL_STAAE RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|81695161|sp|Q5HIE3.1|TRMHL_STAAC RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|13183698|gb|AAK15305.1|AF327733_2 YacO [Staphylococcus aureus subsp. aureus str. Newman]
gi|57285594|gb|AAW37688.1| RNA methyltransferase, TrmH family [Staphylococcus aureus subsp.
aureus COL]
gi|87128184|gb|ABD22698.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|87201852|gb|ABD29662.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|150373506|dbj|BAF66766.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
str. Newman]
gi|160367580|gb|ABX28551.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|259162314|gb|EEW46887.1| hypothetical protein SAD30_0368 [Staphylococcus aureus D30]
gi|269940104|emb|CBI48480.1| SpoU rRNA Methylase family protein [Staphylococcus aureus subsp.
aureus TW20]
gi|282592856|gb|EFB97860.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A9765]
gi|294822819|gb|EFG39254.1| RNA methyltransferase [Staphylococcus aureus A9754]
gi|302750423|gb|ADL64600.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304339656|gb|EFM05603.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315196657|gb|EFU27004.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus CGS01]
gi|320141604|gb|EFW33443.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus MRSA131]
gi|320141768|gb|EFW33596.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus MRSA177]
gi|329313252|gb|AEB87665.1| Putative trmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus T0131]
gi|329731031|gb|EGG67404.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21189]
gi|341843803|gb|EGS85024.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21266]
gi|365167707|gb|EHM59084.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21209]
gi|365170696|gb|EHM61657.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21178]
gi|365244342|gb|EHM85003.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21232]
gi|371985473|gb|EHP02541.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21283]
gi|374362510|gb|AEZ36615.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus VC40]
gi|375017833|gb|EHS11436.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-24]
gi|375026156|gb|EHS19542.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-91]
gi|375033420|gb|EHS26613.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-88]
gi|375368101|gb|EHS72028.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-125]
gi|375369625|gb|EHS73498.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-157]
gi|375372437|gb|EHS76177.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-189]
gi|377696449|gb|EHT20804.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377724578|gb|EHT48693.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|377737759|gb|EHT61768.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377741810|gb|EHT65795.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746054|gb|EHT70025.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377766640|gb|EHT90473.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|383971352|gb|EID87430.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus CO-23]
gi|421956984|gb|EKU09308.1| 23S rRNA (guanosine-2'-O-) -methyltransferase [Staphylococcus
aureus CN79]
gi|436431901|gb|ELP29253.1| RNA methyltransferase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436505870|gb|ELP41729.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21282]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 96 TVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVT 155
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+L+ LK + G E +NA D S A ++G+EG G+S + CDF++
Sbjct: 156 NLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYI 214
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 215 KIPMV-GHVNSLNASVAASLMMY 236
>gi|307128795|ref|YP_003880811.1| tRNA (Guanosine-2'-O-)-methyltransferase [Dickeya dadantii 3937]
gi|306526324|gb|ADM96254.1| tRNA (Guanosine-2'-O-)-methyltransferase [Dickeya dadantii 3937]
Length = 230
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 96/219 (43%), Gaps = 18/219 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S V ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPTNRMRTLVSTAAGSNSWVQVETHRTVQD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++ +AVD + + + T LLG E G++A + D + IP
Sbjct: 82 AVGHLKTQGMQILATNLSASAVDFREVDYTRPTCILLGQEKTGITADALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSA----RQVRRSFCAEKP 178
G SLNV+VA++++L+ ++R R E S Q R F P
Sbjct: 142 V-GMVQSLNVSVASALILYE-------AQRQRQLAGMYQRECSPLDEEEQQRLLFEGGYP 193
Query: 179 ESIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ R +RR+ F D +G ++ + A+ + E
Sbjct: 194 ---VLARVARRKGLPRPFIDHTGQVIADAPWWAAMQSTE 229
>gi|398796171|ref|ZP_10555799.1| rRNA methylase [Pantoea sp. YR343]
gi|398204023|gb|EJM90835.1| rRNA methylase [Pantoea sp. YR343]
Length = 231
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R S GS S V + ++D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSVRMRTMVAASAGSNSWVKVKTHQHIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ AVD + + K T L+G E G++++ + D + +P
Sbjct: 82 AVRHLKDEGMQVLATNLSAKAVDFREIDYTKPTCILMGQEKTGITSEALALADQDIIVPM 141
Query: 123 YGGGTASLNVTVAASIVLHHFGVW---AGFSERTRDGNKYVVAERSARQVRRSFCAEKPE 179
G SLNV+VA++++L+ AG +RT Y + + +Q R F P
Sbjct: 142 V-GMVQSLNVSVASALILYEAQRQRQNAGMYQRT-----YSLLDEDEQQ-RLLFEGGYP- 193
Query: 180 SIIEMRRSRRENASNGFFDGSG 201
+ R ++++N + +G G
Sbjct: 194 --VLARVAKQKNLPYPYINGQG 213
>gi|377575208|ref|ZP_09804203.1| putative RNA methyltransferase [Mobilicoccus pelagius NBRC 104925]
gi|377536062|dbj|GAB49368.1| putative RNA methyltransferase [Mobilicoccus pelagius NBRC 104925]
Length = 207
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
E +V V N N+G++ R+A AF V +VGRR +N G+ + + + H ++D
Sbjct: 58 ELHVAVENWEHDFNIGSIIRTANAFNVGAFHIVGRRRWNRRGAMVTDRYQHEHHHADVAD 117
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ + + V+ +V + + + + G EG GLSA+ V+I Q
Sbjct: 118 LLAWARENAYTVIAVDNVPGSVPLERFDLPRRCVLVFGQEGPGLSAEALAGARALVHITQ 177
Query: 123 YGGGTASLNVTVAASIVLHHF 143
+ G T S+N AA+I +H +
Sbjct: 178 F-GSTRSINAGAAAAITMHAW 197
>gi|379795003|ref|YP_005325001.1| Putative trmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|356871993|emb|CCE58332.1| Putative trmH family tRNA/rRNA methyltransferase [Staphylococcus
aureus subsp. aureus MSHR1132]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ H+
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHIPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E +NA D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKENGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|410661537|ref|YP_006913908.1| TrmH family tRNA/rRNA methyltransferase YacO [Dehalobacter sp. CF]
gi|409023893|gb|AFV05923.1| TrmH family tRNA/rRNA methyltransferase YacO [Dehalobacter sp. CF]
Length = 245
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFG--SHGSTSHVNFRHFHSL 60
+V+ I HN+G L R+A A GV +I+ RR A G S G+ +V +L
Sbjct: 99 LVLDEIEDPHNLGALLRTADAAGVHGVIIPKRRSAALTPAVGRTSAGAVEYVPVARVSNL 158
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+LK + C + G E D+ Q K ++G E GL E CD + +
Sbjct: 159 VQTLKYLKEEGCWVSGAEAGGK--DIYQAELKGPRVIVIGGEDKGLGRLIRETCDEIISL 216
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G +SLN +VA SI+++
Sbjct: 217 PMY-GRISSLNASVAGSIIMYEV 238
>gi|380302176|ref|ZP_09851869.1| rRNA methylase, putative, group 3 [Brachybacterium squillarum
M-6-3]
Length = 313
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS-----HGSTSHVNFRHFHS 59
V + + N+G + RSA AFG +I+ RR + S G+ V +
Sbjct: 161 LVALDGVTDPRNLGAILRSADAFGAHGVIIPERRSASMTASVWKVAAGAAGRVRVAQVTN 220
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST---AFLLGNEGMGLSAKECEICDF 116
L+ A LKS+ + G+ D DVT + T A ++G EG GLS E CD
Sbjct: 221 LNRALSALKSQGVFVLGL---DAEGDVTSRELELGTEPVALVVGAEGKGLSRLTRETCDQ 277
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
V IP GG T SLN +VAA+I L+
Sbjct: 278 VVSIP-MGGQTESLNASVAAAIALYEI 303
>gi|227891225|ref|ZP_04009030.1| tRNA/rRNA methyltransferase [Lactobacillus salivarius ATCC 11741]
gi|227867099|gb|EEJ74520.1| tRNA/rRNA methyltransferase [Lactobacillus salivarius ATCC 11741]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 102 FLILDGIEDPHNLGSIMRTADAAGVHGIIIPKRRAVQLTSVVAKTSTGAIEHVPVVRVTN 161
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK + I G ++ D + K +TA ++GNEG G+S + CD +
Sbjct: 162 LVQTVKELKEQGVWIFGTDM--KGTDFRKWSAKGATALVIGNEGKGISPLLKKTCDEMLT 219
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GF+ R
Sbjct: 220 IPMV-GHVQSLNASVAASLLIYQ-----GFTSR 246
>gi|403237736|ref|ZP_10916322.1| 23S rRNA methyltransferase [Bacillus sp. 10403023]
Length = 249
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ + +++G + + S G+ H+ + H + D L
Sbjct: 119 NLGTMIRTADAAGI-DAVMIGEGTVDVYNSKVVRSTQGAIFHIPIVKTNLHEMIDQ---L 174
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
K + G + NAVD Q ++S A L+GNEG G++ E +YIP Y G +
Sbjct: 175 KQNGVTVYGTSL-KNAVDYKQATVQESYAILVGNEGNGVNPDLLEKTHQNLYIPIY-GKS 232
Query: 128 ASLNVTVAASIVLHHF 143
SLNV VAA I+L+H
Sbjct: 233 ESLNVAVAAGILLYHM 248
>gi|94499900|ref|ZP_01306436.1| putative tRNA/rRNA methyltransferase [Bermanella marisrubri]
gi|94428101|gb|EAT13075.1| putative tRNA/rRNA methyltransferase [Oceanobacter sp. RED65]
Length = 229
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFG--SHGSTSHVNFRHFHSLSD 62
++ + K HN+ + RS AF V+E+ ++ D+ F + GS +VN + +S
Sbjct: 22 LITDAVFKPHNLSAIIRSCDAFAVNELNVVWPYDDYQTFRGRAMGSQQYVNVKTHKDVSQ 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A K + I D AV + K TA ++G E G+SAK ++ D + +P
Sbjct: 82 AIQGFKQQGYQIVAAHFCDQAVPHYDIDYTKPTAIVMGAEKNGVSAKAMDLVDHSIIVPM 141
Query: 123 YGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 142 -EGMVQSLNVSVAAALIL 158
>gi|258452736|ref|ZP_05700734.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A5948]
gi|257859609|gb|EEV82459.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
A5948]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 96 TVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVT 155
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+L+ LK + G E +NA D S A ++G+EG G+S + CDF++
Sbjct: 156 NLAKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYI 214
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 215 KIPMV-GHVNSLNASVAASLMMY 236
>gi|325972623|ref|YP_004248814.1| TrmH family RNA methyltransferase [Sphaerochaeta globus str. Buddy]
gi|324027861|gb|ADY14620.1| RNA methyltransferase, TrmH family, group 3 [Sphaerochaeta globus
str. Buddy]
Length = 251
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+V+ I N+G + RSA F VS +I+ RR A S G+ +V ++
Sbjct: 105 LVLDEITDPQNLGAILRSADQFSVSLVIIPERRSAQANTTVVKVSSGAAQYVPLATVTNM 164
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ +LKS+ + G ++ AV T P K T ++GNEG G+ ++CD V I
Sbjct: 165 NREIEYLKSQGFWVYGASMSGQAVYKTVFP--KRTVLVMGNEGKGIGQLTQKLCDHMVTI 222
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VA I+L+
Sbjct: 223 P-MSGHIDSLNVSVATGILLYEV 244
>gi|163786475|ref|ZP_02180923.1| tRNA/rRNA methyltransferase [Flavobacteriales bacterium ALC-1]
gi|159878335|gb|EDP72391.1| tRNA/rRNA methyltransferase [Flavobacteriales bacterium ALC-1]
Length = 176
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 19/156 (12%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
+++ NI +N+G++ R++ AF + ++ L G A H GST V++ +
Sbjct: 27 IILDNIRSLNNIGSVFRTSDAFLIEKIYLCG---ITAKPPHNDIRKTALGSTETVDWEYV 83
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEICD 115
+ D LK + +C +E ++A + + + +T AF+ GNE G+S + +I D
Sbjct: 84 ENTLDLVEKLKVEGVKVCSIEQAESATMLNKFLPQPNTKYAFVFGNEVKGVSQEVVDISD 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSE 151
+ IPQYG SLN++V+A +V +W FS+
Sbjct: 144 TVIEIPQYGTK-HSLNISVSAGVV-----IWDVFSK 173
>gi|156744301|ref|YP_001434430.1| RNA methyltransferase [Roseiflexus castenholzii DSM 13941]
gi|156235629|gb|ABU60412.1| RNA methyltransferase, TrmH family, group 3 [Roseiflexus
castenholzii DSM 13941]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHS 59
+++ +I NVGTL R+A GV +I+ GRR S G+ H+ +
Sbjct: 99 LLMLDHIQDPQNVGTLLRTAEVVGVHGVIIPGRRAAEITPAVVNASAGAVEHLRIVVVSN 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ ++ + GVE + A + +LG EG GL+ E CDF V
Sbjct: 159 LAATIERVQHAGVWVVGVEDDERARVFDEVDLDLPLTLVLGAEGSGLARLTRERCDFLVR 218
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G ASLNV VA SIVL+H
Sbjct: 219 LPMR-GRIASLNVAVAGSIVLYH 240
>gi|385780797|ref|YP_005756968.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|418573431|ref|ZP_13137625.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21333]
gi|364521786|gb|AEW64536.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus aureus subsp. aureus 11819-97]
gi|371981796|gb|EHO98958.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21333]
Length = 248
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ + HN+G++ R+A A GV +I+ RR A S G+ HV +L
Sbjct: 98 LILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNL 157
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK + G E +NA D S A ++G+EG G+S + CDF++ I
Sbjct: 158 AKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKI 216
Query: 121 PQYGGGTASLNVTVAASIVLH 141
P G SLN +VAAS++++
Sbjct: 217 PMV-GHVNSLNASVAASLMMY 236
>gi|407682024|ref|YP_006797198.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'English Channel 673']
gi|407243635|gb|AFT72821.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'English Channel 673']
Length = 235
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHSLSDA 63
V + N+ K HNV + R+ A G+ + V + F + GS V + +++DA
Sbjct: 22 VCLENVHKPHNVSAVVRTCDAVGIHRVHTVWEKKYQFRRGTAMGSQQWVRQTNHDNINDA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK + + ++D AVD + K TA L G E G S + + D + IP
Sbjct: 82 MAELKGQGMQVLVTHLSDTAVDFRDIDYTKPTAILFGQEKYGASDEAKAVADHDIVIPMM 141
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 142 -GMVQSLNVSVAAALVLY 158
>gi|194476711|ref|YP_002048890.1| tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH
[Paulinella chromatophora]
gi|171191718|gb|ACB42680.1| tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH
[Paulinella chromatophora]
Length = 526
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS-----HGSTSHVNFRHFHSL 60
+ V + HN+G + RSA A G +IL RR+ GS G+ H+ +L
Sbjct: 287 MAVEGLTDPHNLGAIVRSAEALGAHGLILPQRRNAGLTGSVAKVAAGALEHLPVARVVNL 346
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ + LK K I G+ T+ V +T+ + G+EG GLS CD + I
Sbjct: 347 NRSLDILKDKGYRIVGL-ATEGDVSLTEADLNGPLVIVTGSEGNGLSLLTRRYCDQLIRI 405
Query: 121 PQYGGGTASLNVTVAASIVLHHFG--VW 146
P G T SLN +VA++++L+ W
Sbjct: 406 P-LRGATPSLNASVASALMLYEVARRTW 432
>gi|292620337|ref|XP_002664256.1| PREDICTED: probable methyltransferase TARBP1-like [Danio rerio]
Length = 241
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN--AFGSHGSTSHVNFRHFH---- 58
VV I K N+G L R+ FG ++L R N F + +S +
Sbjct: 88 LVVASLIDKPTNLGGLCRTCEIFGAKALVLDSLRHVNDKQFQALSVSSELWLPMMEVKPA 147
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
LSD KS+ + GVE T N+ + + F + + LLGNE G+ A ++ D V
Sbjct: 148 ELSDFLQLKKSEGYWVIGVEQTSNSQSLQDYTFPEKSLLLLGNEREGIPANVLQLLDVCV 207
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
IPQ+ G T SLNV V+A++++ +
Sbjct: 208 EIPQF-GVTRSLNVHVSAALLVWEY 231
>gi|371777507|ref|ZP_09483829.1| tRNA/rRNA methyltransferase (SpoU) [Anaerophaga sp. HS1]
Length = 178
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
VV+ N+ HNVG++ R++ AF + + L G + H G+ V++R+F
Sbjct: 27 VVLDNVRSLHNVGSIFRTSDAFRLQSIFLCG---ITSTPPHKEIHKTALGAEDAVSWRYF 83
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQ-HPFK-KSTAFLLGNEGMGLSAKECEICD 115
+ A LK + + GVE + ++ + + P K A + GNE G+ K + CD
Sbjct: 84 DKTTKALELLKQEGYLLIGVEQVEGSISLPEFKPVKGDKYAVIFGNEVKGVDQKVIDQCD 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHFG 144
+ IPQY G S NV+V+A IVL
Sbjct: 144 MCLEIPQY-GTKHSFNVSVSAGIVLWELA 171
>gi|313679270|ref|YP_004057009.1| tRNA guanosine-2'-o-methyltransferase [Oceanithermus profundus DSM
14977]
gi|313151985|gb|ADR35836.1| tRNA guanosine-2'-O-methyltransferase [Oceanithermus profundus DSM
14977]
Length = 214
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V++ N+ K HN+ + R+A A GV E V G F+ S GS V R ++
Sbjct: 22 VLMENVHKPHNLSAILRTADAVGVYEAHAVNPTGGVPTFHD-TSGGSEKWVYLRVHPNVE 80
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK + + +++ AVD + + + +A LLG E G+S + E+ D V IP
Sbjct: 81 AALEHLKGRGFTVYAANLSERAVDYREVDYTRPSAVLLGAEKWGVSPRAAELADADVIIP 140
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 141 MM-GMVQSLNVSVAAAVIL 158
>gi|410658550|ref|YP_006910921.1| TrmH family tRNA/rRNA methyltransferase YacO [Dehalobacter sp. DCA]
gi|409020905|gb|AFV02936.1| TrmH family tRNA/rRNA methyltransferase YacO [Dehalobacter sp. DCA]
Length = 245
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFG--SHGSTSHVNFRHFHSL 60
+V+ I HN+G L R+A A GV +I+ RR A G S G+ +V +L
Sbjct: 99 LVLDEIEDPHNLGALLRTADAAGVHGVIIPKRRSAALTPAVGRTSAGAVEYVPVARVSNL 158
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+LK + C + G E D+ Q K ++G E GL E CD + +
Sbjct: 159 VQTLKYLKEEGCWVSGAEAGGK--DIYQAELKGPRVIVIGGEDKGLGRLIRETCDEIISL 216
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G +SLN +VA SI+++
Sbjct: 217 PMY-GRISSLNASVAGSIIMYEV 238
>gi|390953016|ref|YP_006416774.1| rRNA methylase [Aequorivita sublithincola DSM 14238]
gi|390419002|gb|AFL79759.1| rRNA methylase [Aequorivita sublithincola DSM 14238]
Length = 219
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR---DFNAFGSHGSTSHVNFRHFHSLSD 62
VV ++ + HN + R+ FG+ ++ +V + + + G+ V+F+ +HS+ +
Sbjct: 34 VVTEDVYQLHNTSAVMRTCDVFGIQDLHVVEEKVSKRIDKEIAMGAQKWVDFKRYHSIKE 93
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
LKS I +N+ + + K +AF G E GLS D F+ IP
Sbjct: 94 CISNLKSSGYQIIATTPHENSTMLHEFDVSKKSAFFFGKETDGLSDTVMNAADGFLKIPM 153
Query: 123 YGGGTASLNVTVAASIVLH 141
Y G T SLN++V+A+I+L
Sbjct: 154 Y-GFTESLNISVSAAIILQ 171
>gi|418599333|ref|ZP_13162822.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21343]
gi|374397440|gb|EHQ68650.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus 21343]
Length = 248
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ + HN+G++ R+A A GV +I+ RR A S G+ HV +L
Sbjct: 98 LILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNL 157
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK + G E +NA D S A ++G+EG G+S + CDF++ I
Sbjct: 158 AKTIDELKDNGFWVAGTE-ANNATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKI 216
Query: 121 PQYGGGTASLNVTVAASIVLH 141
P G SLN +VAAS++++
Sbjct: 217 PMV-GHVNSLNASVAASLMMY 236
>gi|150015025|ref|YP_001307279.1| RNA methyltransferase [Clostridium beijerinckii NCIMB 8052]
gi|149901490|gb|ABR32323.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
beijerinckii NCIMB 8052]
Length = 300
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
V++ + HN+G++ R+A FGV +IL RR + S G+ HV +L
Sbjct: 154 VILDEVEDPHNLGSIVRTAELFGVHGIILPKRRSASVSTTVYKSSVGAIEHVKIAKVTNL 213
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK K I G +I Q F A ++GNEG G+S E CD + I
Sbjct: 214 NSTIEELKEKGIWIYGADIRAEEYSY-QVDFGGPCAVIIGNEGRGISKLTVEKCDKLIKI 272
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLN +VA I+++
Sbjct: 273 PMV-GKINSLNASVAGGIIMYEV 294
>gi|444431281|ref|ZP_21226449.1| putative RNA methyltransferase [Gordonia soli NBRC 108243]
gi|443887876|dbj|GAC68170.1| putative RNA methyltransferase [Gordonia soli NBRC 108243]
Length = 245
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF S + +VGRR +N G+ + + + H +
Sbjct: 97 HVAIENFAHDANIGTVVRTANAFAASSVHIVGRRRWNRRGAMVTDRYQHIVHQPDVGALL 156
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ + V+ T A + ++ L G EG G+S D V I Q+
Sbjct: 157 TWAHAEGLAVVAVDNTPGAQPLETTALPRACVLLFGQEGPGVSDDAQSGADLTVSIAQF- 215
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 216 GSTRSINAGVAAGIAMHAW 234
>gi|282599849|ref|ZP_05972117.2| tRNA guanosine-2'-O-methyltransferase [Providencia rustigianii DSM
4541]
gi|282567380|gb|EFB72915.1| tRNA guanosine-2'-O-methyltransferase [Providencia rustigianii DSM
4541]
Length = 226
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDAR 64
+ I K HNV + RSA A G+ ++ + + + GS S V S DA
Sbjct: 13 LEEIHKPHNVSAIVRSADAIGIHQIHAIWPDQHVKLSVSSAAGSNSWVKVISHSSTEDAI 72
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+K++ + ++++AVD + + + T ++G E G+S K + D + IP
Sbjct: 73 AQIKAQGMQVLATNLSEHAVDFREIDYTRPTCIMMGQEKKGISQKALALADQHIIIP-MA 131
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++++
Sbjct: 132 GMVQSLNVSVASALIMY 148
>gi|421079347|ref|ZP_15540291.1| TRNA guanosine-2'-O-methyltransferase [Pectobacterium wasabiae CFBP
3304]
gi|401706053|gb|EJS96232.1| TRNA guanosine-2'-O-methyltransferase [Pectobacterium wasabiae CFBP
3304]
Length = 230
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 18/219 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HN+ + R+A A GV ++ + R + GS S V + ++ D
Sbjct: 22 ICMEQVHKPHNISAVIRTADAVGVHQVHAIWPTSRMKTLVSSAAGSNSWVEVKTHRTIRD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++++AVD + + T LLG E G++A+ ++ D + IP
Sbjct: 82 AVGHLKDEGMQVLATNLSEHAVDFREIDYTLPTCILLGQEKTGITAEALKLADRDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSA----RQVRRSFCAEKP 178
G SLNV+VA++++L+ ++R R E S Q R F P
Sbjct: 141 MTGMVQSLNVSVASALILYE-------AQRQRQNAGMYQREDSPLDEEEQQRLLFEGGYP 193
Query: 179 ESIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ R ++R+ + D G V+ + A+ + E
Sbjct: 194 ---VLARVAKRKGLPRPYIDHQGQIVADTPWWAAMQSSE 229
>gi|67924215|ref|ZP_00517655.1| RNA methyltransferase TrmH, group 3 [Crocosphaera watsonii WH 8501]
gi|416402443|ref|ZP_11687392.1| TrmH family tRNA/rRNA methyltransferase YacO [Crocosphaera watsonii
WH 0003]
gi|67853934|gb|EAM49253.1| RNA methyltransferase TrmH, group 3 [Crocosphaera watsonii WH 8501]
gi|357261904|gb|EHJ11119.1| TrmH family tRNA/rRNA methyltransferase YacO [Crocosphaera watsonii
WH 0003]
Length = 292
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V+ +I+ HN+G + R+A A G MI+ RR A G + S V S ARV
Sbjct: 140 VIADSISDPHNLGAIIRTAEALGCQGMIIPQRR---AAGVTSTVSKVAAGALESFPVARV 196
Query: 66 FLKSKDCDICGVE-------ITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
S+ + E +++ + F+ + ++G+EG GLS CD V
Sbjct: 197 VNLSRALETLKAEGFWIYGTVSEGGKRLQDFNFRGAIGLVIGSEGSGLSLLTQRCCDELV 256
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
IP GG T SLN +VAA+I L+
Sbjct: 257 SIP-LGGKTPSLNASVAAAINLYEI 280
>gi|260904198|ref|ZP_05912520.1| TrmH family RNA methyltransferase [Brevibacterium linens BL2]
Length = 214
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 1/141 (0%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
E +V V N N+G++ R+A AF + + +VGRR +N G+ + + + H S+ D
Sbjct: 64 EFHVGVENWQHDLNIGSVVRTANAFNAAAVHIVGRRRWNRRGAMVTDRYQHIIHHPSIDD 123
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ D + G++ ++V + + + + L G EG GLS + + + I Q
Sbjct: 124 LLQWCTDNDVPLIGIDNFPDSVPLETYDLPRRSLLLFGQEGPGLSEEAHQASTAVLSIAQ 183
Query: 123 YGGGTASLNVTVAASIVLHHF 143
Y G T S+N AA+I +H +
Sbjct: 184 Y-GSTRSMNAAAAAAITMHSW 203
>gi|418461919|ref|ZP_13032979.1| rRNA methylase [Saccharomonospora azurea SZMC 14600]
gi|359738046|gb|EHK86958.1| rRNA methylase [Saccharomonospora azurea SZMC 14600]
Length = 231
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + +VG++ +N G+ + + + H ++
Sbjct: 83 HVAIENFQHDHNIGTVVRTANAFAAKAVHIVGKKRWNRRGAMVTDRYQHLHHHAEVAGLV 142
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ T A + + L G EG GLS V I Q+
Sbjct: 143 EFATEHGLAVVAVDNTPGAQPIETVRLPRECVLLFGQEGPGLSEDAQRAASLVVSIAQF- 201
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 202 GTTRSINAGVAAGIVMHAW 220
>gi|317485615|ref|ZP_07944491.1| SpoU rRNA methylase [Bilophila wadsworthia 3_1_6]
gi|345886027|ref|ZP_08837307.1| hypothetical protein HMPREF0178_00081 [Bilophila sp. 4_1_30]
gi|316923152|gb|EFV44362.1| SpoU rRNA methylase [Bilophila wadsworthia 3_1_6]
gi|345041427|gb|EGW45584.1| hypothetical protein HMPREF0178_00081 [Bilophila sp. 4_1_30]
Length = 196
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNF----RHFHSL 60
+V+ NI HNV + RSA AFGV+ + + F G S S + RH S
Sbjct: 26 LVLANIHDPHNVSAIYRSADAFGVAALHLYYTDTAFPELGKKSSASARKWVESVRH-RSA 84
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK+ I T + + + F K TA ++GNE G+ A+ + D VYI
Sbjct: 85 EELYAALKAGGHQILATSCTPESKPLGAYDFTKPTAVIMGNEHSGVPAELNSLVDGEVYI 144
Query: 121 PQYGGGTASLNVTVAASIVL 140
P Y G S NV+VAA+++L
Sbjct: 145 PMY-GMIQSFNVSVAAAVIL 163
>gi|21674078|ref|NP_662143.1| SpoU rRNA methylase [Chlorobium tepidum TLS]
gi|21647231|gb|AAM72485.1| spoU rRNA methylase family protein [Chlorobium tepidum TLS]
Length = 169
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 13/144 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
++++NI NVG + R+A A G+ E+++ G R++ + + G+ V +RHF
Sbjct: 19 LMLYNIRSMWNVGAMFRTADAAGIDEIVITGYTATPPRKEIDK-TALGAQETVPWRHFAD 77
Query: 60 LSDARVFLKSKDCDICGVEITDNA---VDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+A LK + I G+EI +N+ +T F A ++GNE G+ CD
Sbjct: 78 PVEAITVLKRESKKIFGLEIAENSRSYSSLTAGDF--PLALIVGNEVEGIGDALLSHCDG 135
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
+ IPQY G SLNV VAA + L
Sbjct: 136 VIEIPQY-GVKHSLNVAVAAGVAL 158
>gi|78187470|ref|YP_375513.1| RNA methyltransferase TrmH, group 3 [Chlorobium luteolum DSM 273]
gi|78167372|gb|ABB24470.1| RNA methyltransferase TrmH, group 3 [Chlorobium luteolum DSM 273]
Length = 248
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAF---GSHGSTSHVNFRHFHSL 60
VV+ + HN+G + R+A A ++LV + NA S G+ SH+ SL
Sbjct: 102 VVLQGLDDPHNIGAIIRTAEAVAADGVVLVEGKGAPVNAVVHKASAGALSHMRVAKVKSL 161
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
L + + ++ + + T F+K+TA +LG EG GL+ + E CD V I
Sbjct: 162 VRCLELLHREGIQVLATDM-EAETNYTDADFRKATAIVLGAEGSGLAPEAMEFCDRVVRI 220
Query: 121 PQYGGGTASLNVTVAASIVLH 141
P G SLNV+V+A ++L+
Sbjct: 221 PM-AGCVESLNVSVSAGVMLY 240
>gi|310827804|ref|YP_003960161.1| RNA methyltransferase [Eubacterium limosum KIST612]
gi|308739538|gb|ADO37198.1| RNA methyltransferase [Eubacterium limosum KIST612]
Length = 290
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAF---GSHGSTSHVNFRHFH 58
SYV++ ++ NVGT+ R+A A G +I + +N G+ GS H+
Sbjct: 141 SYVILDDVQDPGNVGTIIRTADAAGFDGIICSSKTADIYNEKVLRGAMGSVFHLPVLQTG 200
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+L +FLK + + G + +K+ +LGNE G+S ++CD
Sbjct: 201 ALEKTVLFLKEQGTRMIGTSLQGKTSLSASLAAQKAVGIILGNESKGMSKSMADLCDDLY 260
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFG 144
+P YG SLNV+VAA I+++
Sbjct: 261 KLPMYGHAE-SLNVSVAAGILMYDIA 285
>gi|238755588|ref|ZP_04616925.1| tRNA guanosine-2'-O-methyltransferase [Yersinia ruckeri ATCC 29473]
gi|238706188|gb|EEP98568.1| tRNA guanosine-2'-O-methyltransferase [Yersinia ruckeri ATCC 29473]
Length = 230
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAF-GSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ I + + GS S V + + D
Sbjct: 22 VCLEQVHKPHNVSAVIRTADAVGIHQIHAIWPTTEMYTLLSAAAGSNSWVQVKTHPDIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A KS+ I ++D AVD + + + T L+G E G+S + + D + IP
Sbjct: 82 AVQHFKSQGMQILATHLSDKAVDFREIDYTRPTCILMGQEKTGISKQALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|410619017|ref|ZP_11329935.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola polaris LMG
21857]
gi|410161432|dbj|GAC34073.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola polaris LMG
21857]
Length = 255
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
+ + + K HNV L RS A G++ + + + S G+ + V S+ DA
Sbjct: 28 ICLEQVNKPHNVSALIRSCDAVGINRIHAVWDNKARLRKKTSMGAENWVYTDMHPSIGDA 87
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK + + ++D+AVD + + K TA +LG E G + + + D + IP
Sbjct: 88 VSHLKQQGMQVLVTHLSDDAVDFREIDYTKPTAIILGQEKTGATEEAIALADKNIVIPMV 147
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 148 -GMVQSLNVSVAAAVVLY 164
>gi|343522054|ref|ZP_08759020.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 175
str. F0384]
gi|343401463|gb|EGV13969.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 175
str. F0384]
Length = 251
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N+++ N+G++ RSA AF V+ + ++GRR +N G+ + +++ RH +
Sbjct: 104 HIAIENVSQDLNIGSIVRSANAFNVAGVHIIGRRRWNKRGAMVTNRYLDVRHHPEPGELL 163
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +++ ++ G++ A + + + G+EG G+S + C + I QY
Sbjct: 164 AWARAEGYEVIGIDNGPGAQPLEAADLPERCLMVFGSEGEGISPELSAGCSRLLRIGQY- 222
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV AA++ +H +
Sbjct: 223 GSTRSINVAAAAAVAMHTW 241
>gi|148284217|ref|YP_001248307.1| tRNA/rRNA methyltransferase [Orientia tsutsugamushi str. Boryong]
gi|146739656|emb|CAM79445.1| tRNA/rRNA methyltransferase [Orientia tsutsugamushi str. Boryong]
Length = 242
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH-----GSTSHVNFRHFHSLS 61
++ + +N+G + RSA AF +S +IL G+ G+ +N +L
Sbjct: 95 ILDQLLDHNNLGAIIRSAAAFDISTIILPENNSIEENGTIAKIAVGALEKINLVKVKNLY 154
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+ +LK + I G+++ D+ +T+ F TAF+LG+E GL + CDF + IP
Sbjct: 155 NTINYLKKHEFWIIGLDLNDSN-QLTEQTFHSKTAFVLGSENKGLRNLTRQQCDFLIKIP 213
Query: 122 QYGGGTASLNVTVAASIVLH 141
T SLNV AA+I+ +
Sbjct: 214 M-SHKTESLNVAGAATIIFY 232
>gi|340356799|ref|ZP_08679440.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Sporosarcina
newyorkensis 2681]
gi|339620137|gb|EGQ24708.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Sporosarcina
newyorkensis 2681]
Length = 252
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A GV +I+ RR G S G+ H+ ++
Sbjct: 100 FIILDELEDPHNLGSILRTADASGVHGIIIPKRRSVGLTGVVAKASTGAIEHIPVVRVNN 159
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + I G + + N+ D A ++G+EG G+S E CDF
Sbjct: 160 LSQTVDDLKKRGVWIAGTDAS-NSTDYRHMDATLPLAVIIGSEGKGMSRILRERCDFLYS 218
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+P G T SLN +VAA+++++
Sbjct: 219 LPMVGRVT-SLNASVAAALLMYEV 241
>gi|375291703|ref|YP_005126243.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae 241]
gi|376246539|ref|YP_005136778.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae HC01]
gi|371581374|gb|AEX45041.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae 241]
gi|372109169|gb|AEX75230.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae HC01]
Length = 222
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + I ++ T V + + L G EG G++ + + I Q+
Sbjct: 134 AWAKQQGLTIVAIDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDSARMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|325102944|ref|YP_004272598.1| tRNA/rRNA methyltransferase SpoU [Pedobacter saltans DSM 12145]
gi|324971792|gb|ADY50776.1| tRNA/rRNA methyltransferase (SpoU) [Pedobacter saltans DSM 12145]
Length = 176
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
VV+ N+ HNVG+ R+A F V + L G A H G+T +++++F
Sbjct: 27 VVLDNVRSLHNVGSAFRTADGFAVDALYLCG---ITAQPPHREIEKTALGATQSIDWQYF 83
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLL--GNEGMGLSAKECEICD 115
+++DA LK I +E +N++ + KK F L GNE G+S + + D
Sbjct: 84 ANVADAVADLKENGYQIIAIEQAENSISLLDFEPKKDQKFALFFGNEVNGVSEEVMKQID 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ+ G S N+ ++ IVL F
Sbjct: 144 TCIEIPQF-GTKHSFNIVISTGIVLWDF 170
>gi|149369726|ref|ZP_01889578.1| tRNA/rRNA methyltransferase [unidentified eubacterium SCB49]
gi|149357153|gb|EDM45708.1| tRNA/rRNA methyltransferase [unidentified eubacterium SCB49]
Length = 179
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 10/146 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+++ NI +N+G++ R+A AF + ++ L G +D + G+T V + H +
Sbjct: 29 IILDNIRSLNNIGSVFRTADAFLIEKIYLCGITATPPHKDIQK-TALGATESVAWEHVEN 87
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFK--KSTAFLLGNEGMGLSAKECEICDFF 117
D V LK++ IC +E + +V + ++ K+ A + GNE G+ D
Sbjct: 88 TEDLIVSLKNEGVTICAIEQAEQSVSLEKYEVSKDKTYAVVFGNEVKGVQQTVVTESDVV 147
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQYG SLN++V+ +V+ F
Sbjct: 148 IEIPQYGTK-HSLNISVSTGVVVWDF 172
>gi|336172566|ref|YP_004579704.1| tRNA/rRNA methyltransferase SpoU [Lacinutrix sp. 5H-3-7-4]
gi|334727138|gb|AEH01276.1| tRNA/rRNA methyltransferase (SpoU) [Lacinutrix sp. 5H-3-7-4]
Length = 176
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 15/154 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+V+ NI +N+G++ R++ AF V ++ L G +D N + GST V++ + +
Sbjct: 27 IVLDNIRSLNNIGSVFRTSDAFLVEKIYLCGITATPPHKDINK-TALGSTDAVSWEYAKT 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLL--GNEGMGLSAKECEICDFF 117
+ LK KD IC +E +NA + +K+T + L GNE G+ D
Sbjct: 86 TMEVIEKLKIKDVKICSIEQAENATMLNDFTVEKNTTYALVFGNEVKGVDQNIVNASDSV 145
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSE 151
+ IPQ+G SLN++V+ +V VW FS+
Sbjct: 146 IEIPQFGTK-HSLNISVSCGVV-----VWDLFSK 173
>gi|403725868|ref|ZP_10946820.1| putative RNA methyltransferase [Gordonia rhizosphera NBRC 16068]
gi|403204708|dbj|GAB91151.1| putative RNA methyltransferase [Gordonia rhizosphera NBRC 16068]
Length = 257
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + RH S+++
Sbjct: 109 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLRHHDSVTELM 168
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++++ + V+ T A + + L G EG G+S D V I Q+
Sbjct: 169 EWARTENLAVVAVDNTPGAQRLETADLPRDCVLLFGQEGPGVSDDAQRHADLTVSIAQF- 227
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA + +H +
Sbjct: 228 GSTRSINAGVAAGVAMHAW 246
>gi|157412835|ref|YP_001483701.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9215]
gi|157387410|gb|ABV50115.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9215]
Length = 223
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLS 61
V+V ++ K HN+ + R+ A GV E + + + FN+ + GS V + +
Sbjct: 24 VLVEDVNKPHNLSAILRTCDAAGVFEANFISKTNAVKTFNS-TAQGSQKWVKLNNHENTI 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK+K + G + +VD + ++T F+LG E GLS + + D ++IP
Sbjct: 83 KAISDLKNKGFKLYGTTLNSKSVDYRNFDYSQNTCFVLGAEKWGLSNELISMVDQSIFIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAASI+L
Sbjct: 143 MR-GMVQSLNVSVAASILL 160
>gi|392969841|ref|ZP_10335253.1| RNA methyltransferase [Staphylococcus equorum subsp. equorum Mu2]
gi|392512129|emb|CCI58449.1| RNA methyltransferase [Staphylococcus equorum subsp. equorum Mu2]
Length = 255
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ H+
Sbjct: 100 LSTVLILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIEHIPVIR 159
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L++ LK + G E +N+ D + A ++G+EG G+S + CDF
Sbjct: 160 VTNLANTIDTLKDNGYWVVGTE-AENSTDYREMDAAMPLAIVIGSEGQGMSRLVKDKCDF 218
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNK 158
++ IP G SLN +VAAS++++ + +R + G+K
Sbjct: 219 YINIPMV-GHVNSLNASVAASLMMYEV-----YRKRHQIGDK 254
>gi|237742621|ref|ZP_04573102.1| 23S rRNA methyltransferase [Fusobacterium sp. 4_1_13]
gi|229430269|gb|EEO40481.1| 23S rRNA methyltransferase [Fusobacterium sp. 4_1_13]
Length = 234
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G + +++ + + F+LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAA-GEASINYNEEDYPNKVVFVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|119357220|ref|YP_911864.1| tRNA/rRNA methyltransferase SpoU [Chlorobium phaeobacteroides DSM
266]
gi|119354569|gb|ABL65440.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobium phaeobacteroides DSM
266]
Length = 180
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+++ NI NVG + R+A A G+ ++IL G R++ + + G+ V + + S
Sbjct: 30 LMLDNIRSMWNVGAMFRTADAAGIEKIILTGYTAAPPRKEIDK-TALGAQETVRWEYCES 88
Query: 60 LSDARVFLKSKDCDICGVEITD-----NAVDVTQHPFKKSTAFLLGNEGMGLSAKECEIC 114
+A LK++ IC +EI + A+ T P ++GNE G+ + C
Sbjct: 89 ALEAIATLKARGVKICALEIAEPSRPYTAMRKTDFPL----CLIVGNEVDGIGDELLREC 144
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHF 143
D + IPQY G SLNV VAA + L F
Sbjct: 145 DEVIEIPQY-GAKHSLNVAVAAGVSLFEF 172
>gi|323497036|ref|ZP_08102059.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sinaloensis DSM
21326]
gi|323317880|gb|EGA70868.1| tRNA guanosine-2'-O-methyltransferase [Vibrio sinaloensis DSM
21326]
Length = 227
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDARV 65
+ + K +NV + R+A A G+ ++ V + S G+ + V+ S+ +A
Sbjct: 24 LEEVHKPNNVSAVIRTADATGIHKIHAVWPNEMRTLSHTSAGARNWVDVETHDSIEEAIS 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LKS+ + ++D+AVD Q + K TA +LG+E +G S + ++ D + +P G
Sbjct: 84 ELKSQGMQVLVTNLSDSAVDFRQIDYTKPTAIILGSEKIGASEQAKKLADQDIIVPMV-G 142
Query: 126 GTASLNVTVAASIVLH 141
SLNV+VA++++L+
Sbjct: 143 MVQSLNVSVASAVILY 158
>gi|308190283|ref|YP_003923214.1| tRNA/rRNA methyltransferase [Mycoplasma fermentans JER]
gi|319777677|ref|YP_004137328.1| tRNA/rRNA methyltransferase [Mycoplasma fermentans M64]
gi|307625025|gb|ADN69330.1| tRNA/rRNA methyltransferase [Mycoplasma fermentans JER]
gi|318038752|gb|ADV34951.1| tRNA/rRNA methyltransferase [Mycoplasma fermentans M64]
Length = 231
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHF 57
E+ +V+ +I HN+G + R+A G+ +I+ R N S G ++
Sbjct: 84 ENVLVLDHIQDPHNLGAIIRTANTCGIKHLIISKERSANITSTVLKVSSGGFVNMKIIKV 143
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+S+S LK + I + + A V Q F K + ++GNEG G+S D
Sbjct: 144 NSISATLTKLKKWNYWIYVSALDETAQKVNQVTFNKPSVLVVGNEGDGVSKSTLNEADQV 203
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIPQ G S+NV+VA I+L+
Sbjct: 204 IYIPQ-KGSVQSMNVSVATGILLYEL 228
>gi|238810259|dbj|BAH70049.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 244
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHF 57
E+ +V+ +I HN+G + R+A G+ +I+ R N S G ++
Sbjct: 97 ENVLVLDHIQDPHNLGAIIRTANTCGIKHLIISKERSANITSTVLKVSSGGFVNMKIIKV 156
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+S+S LK + I + + A V Q F K + ++GNEG G+S D
Sbjct: 157 NSISATLTKLKKWNYWIYVSALDETAQKVNQVTFNKPSVLVVGNEGDGVSKSTLNEADQV 216
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIPQ G S+NV+VA I+L+
Sbjct: 217 IYIPQ-KGSVQSMNVSVATGILLYEL 241
>gi|78778803|ref|YP_396915.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9312]
gi|78712302|gb|ABB49479.1| tRNA (guanosine-2'-O-)-methyltransferase [Prochlorococcus marinus
str. MIT 9312]
Length = 223
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLS 61
V+V ++ K HN+ + R+ A GV E + + + FN+ + GS V + +
Sbjct: 24 VLVEDVNKPHNLSAILRTCDAAGVFEANFISKTNAVKTFNS-TAQGSQKWVKLNNHENTI 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK+K + G + +VD + ++T F+LG E GLS + + D ++IP
Sbjct: 83 TAISDLKNKGFKLYGTTLNSESVDYRNFDYSQNTCFVLGAEKWGLSKEIISMVDQSIFIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAASI+L
Sbjct: 143 MR-GMVQSLNVSVAASILL 160
>gi|407773011|ref|ZP_11120313.1| tRNA/rRNA methyltransferase SpoU [Thalassospira profundimaris
WP0211]
gi|407284964|gb|EKF10480.1| tRNA/rRNA methyltransferase SpoU [Thalassospira profundimaris
WP0211]
Length = 205
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR--RDFNAFGSHGSTSHVNFRHFHSLSDA 63
+ + +K NVGTL RSA AFG S V R+ + + S S ++H
Sbjct: 7 IGIEGASKPLNVGTLFRSAHAFGASFAFTVDADFREERSNITDTSKSGEQMPYYHFPDHE 66
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
+FL + C + GVE+T +A+++ A++LG E LS + E CDF + IP
Sbjct: 67 NLFL-PQGCRMVGVELTPDAIELPSFKHPSQAAYILGPERGNLSDEMQEKCDFIIKIPM- 124
Query: 124 GGGTASLNVTVAASIVLH 141
+ +NV +AA+IV++
Sbjct: 125 ---SFCVNVAIAANIVMY 139
>gi|333382357|ref|ZP_08474027.1| hypothetical protein HMPREF9455_02193 [Dysgonomonas gadei ATCC
BAA-286]
gi|332828668|gb|EGK01360.1| hypothetical protein HMPREF9455_02193 [Dysgonomonas gadei ATCC
BAA-286]
Length = 175
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ N+ +N+G++ R++ AF + + L G + G+ + V++ ++
Sbjct: 27 VILDNVRSLNNIGSVFRTSDAFLIESVYLCGITACPPNAEIHKTALGAENSVDWVYYEDT 86
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEICDFFV 118
DA LK + IC +E + ++ + + K+ A +LGNE G+ + ++CD +
Sbjct: 87 RDALRGLKDRGFTICAIEQAERSIMLDELVVDKAKGYAVVLGNEVKGVRQEVVDLCDCCI 146
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
IPQY G SLNV+VAA IV+ F
Sbjct: 147 EIPQY-GTKHSLNVSVAAGIVIWEF 170
>gi|328949218|ref|YP_004366555.1| TrmH family RNA methyltransferase [Treponema succinifaciens DSM
2489]
gi|328449542|gb|AEB15258.1| RNA methyltransferase, TrmH family, group 3 [Treponema
succinifaciens DSM 2489]
Length = 258
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFN-----AFGSHGSTSHVNFRHFH 58
+V+ ++ HNVG + RS FG S M++ R D N A S G++S V+
Sbjct: 110 IVLDSVTDPHNVGAILRSCDQFGASLMVVPDHRSADINNNEIIARASAGASSWVDVAKVP 169
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+L A LKS I G + +++ F K T ++G+EG G++ E CD V
Sbjct: 170 NLVRAVQILKSAGFWIYGAD--AGGTTLSKIKFPKKTCIIMGSEGSGIARLLQEQCDEIV 227
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
IP G SLNV+VAA ++L+
Sbjct: 228 SIPTC-GKIDSLNVSVAAGVLLYE 250
>gi|257057786|ref|YP_003135618.1| rRNA methylase [Saccharomonospora viridis DSM 43017]
gi|256587658|gb|ACU98791.1| rRNA methylase [Saccharomonospora viridis DSM 43017]
Length = 238
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + + +VG+R +N G+ + + + H +S
Sbjct: 80 HVAIENFQHDHNIGTVVRTANAFAAAAVHIVGKRRWNRRGAMVTDRYQHLHHHPQVSGLV 139
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + I V+ T A V + L G EG GLS + + V I Q+
Sbjct: 140 DYATERGLTIVAVDNTPGAQPVETVRLPRECVLLFGQEGPGLSEDAQQAAELVVSIAQF- 198
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 199 GSTRSINAGVAAGIVMHTW 217
>gi|260578510|ref|ZP_05846422.1| TrmH family RNA methyltransferase [Corynebacterium jeikeium ATCC
43734]
gi|258603349|gb|EEW16614.1| TrmH family RNA methyltransferase [Corynebacterium jeikeium ATCC
43734]
Length = 227
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + +H ++ +
Sbjct: 79 HIAIENFENDSNIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLQHHATVGEVL 138
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ T V + + L G EG G++ + + V I Q+
Sbjct: 139 EFAAREGLVVVAVDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDAARMTVSIAQF- 197
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 198 GSTRSINAGVAAGIAMHAW 216
>gi|340793355|ref|YP_004758818.1| hypothetical protein CVAR_0397 [Corynebacterium variabile DSM
44702]
gi|340533265|gb|AEK35745.1| hypothetical protein CVAR_0397 [Corynebacterium variabile DSM
44702]
Length = 172
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H
Sbjct: 24 HIAIENFENDSNIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLEHHPDTGSVM 83
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + D + V+ T +V + + L G EG G++A+ V I Q+
Sbjct: 84 AYAAAHDLTVVAVDNTPGSVPLETAELPERCLLLFGQEGPGVTAEAQAGASMTVSIAQF- 142
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 143 GSTRSINAGVAAGIAMHAW 161
>gi|67923985|ref|ZP_00517438.1| tRNA (guanosine-2'-O-)-methyltransferase [Crocosphaera watsonii WH
8501]
gi|416404859|ref|ZP_11687788.1| rRNA methylase SpoU [Crocosphaera watsonii WH 0003]
gi|67854160|gb|EAM49466.1| tRNA (guanosine-2'-O-)-methyltransferase [Crocosphaera watsonii WH
8501]
gi|357261441|gb|EHJ10708.1| rRNA methylase SpoU [Crocosphaera watsonii WH 0003]
Length = 216
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD-FNAFG--SHGSTSHVNFRHFHS-LS 61
V+ ++ K HN+ + R+ A G+ ++ + D F F S GS F H H +
Sbjct: 24 VLTEDVHKPHNLSAIIRTCDAVGILDVHSINTTDEFPTFSQVSQGSDKW-TFLHTHPDIK 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A +LKSK +I T+ ++D + + TA LLG E G+S + + D + IP
Sbjct: 83 TAITYLKSKKINIYAAHFTEKSLDYRDIDYTQPTAILLGAEKWGVSEEAANLVDGNIIIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 143 ML-GMVQSLNVSVAAAVIL 160
>gi|407771438|ref|ZP_11118795.1| tRNA/rRNA methyltransferase SpoU [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407285543|gb|EKF11042.1| tRNA/rRNA methyltransferase SpoU [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 205
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGR--RDFNAFGSHGSTSHVNFRHFHSLSDARV 65
+ +K NVGTL RSA AFG S V RD A + S + ++H +
Sbjct: 9 IEGASKPFNVGTLFRSAHAFGASFAFTVDADFRDERANVADTSRASEQMPYYHFPDHDHL 68
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
FL C + GVE+T +A+++ A++LG E LS + + CDF + IP
Sbjct: 69 FLPDG-CRMVGVELTPDAIELPSFKHPSRAAYILGPERGNLSQEMQDQCDFIIKIPM--- 124
Query: 126 GTASLNVTVAASIVLH 141
+ +NV +AA+IV++
Sbjct: 125 -SFCVNVAIAANIVMY 139
>gi|403047546|ref|ZP_10903014.1| SpoU rRNA methylase [Staphylococcus sp. OJ82]
gi|402763080|gb|EJX17174.1| SpoU rRNA methylase [Staphylococcus sp. OJ82]
Length = 249
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ H+
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIEHIPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L++ LK + G E +N+ D + A ++G+EG G+S + CDF
Sbjct: 154 VTNLANTIDTLKDNGYWVVGTE-AENSTDYREMDAAMPLAIVIGSEGQGMSRLVKDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNK 158
++ IP G SLN +VAAS++++ + +R + G+K
Sbjct: 213 YINIPMV-GHVNSLNASVAASLMMYEV-----YRKRHQIGDK 248
>gi|376243669|ref|YP_005134521.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae CDCE 8392]
gi|376257928|ref|YP_005145819.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae VA01]
gi|372106911|gb|AEX72973.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae CDCE 8392]
gi|372120445|gb|AEX84179.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae VA01]
Length = 222
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + I ++ T V + + L G EG G++ + + I Q+
Sbjct: 134 AWAKQQGLTIVAIDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDNARMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|284034585|ref|YP_003384516.1| tRNA/rRNA methyltransferase SpoU [Kribbella flavida DSM 17836]
gi|283813878|gb|ADB35717.1| tRNA/rRNA methyltransferase (SpoU) [Kribbella flavida DSM 17836]
Length = 226
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF E+ +VG R +N G+ + + + RH L+D
Sbjct: 79 HVAIENWQHDLNIGSVVRTANAFLAREVHIVGNRKWNRRGAMVTDRYQHVRHHPQLADLA 138
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + ++ + GV+ +V + + ++ L G EG GL+ IC + I QY
Sbjct: 139 GYAEQQNLPVIGVDNLPGSVPLETYELPEACVLLFGQEGPGLTDAAHRICTDVLNIGQY- 197
Query: 125 GGTASLN 131
G T S+N
Sbjct: 198 GSTRSIN 204
>gi|392414321|ref|YP_006450926.1| rRNA methylase [Mycobacterium chubuense NBB4]
gi|390614097|gb|AFM15247.1| rRNA methylase [Mycobacterium chubuense NBB4]
Length = 214
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G + R+A AF V + +VGRR +N G+ + + RH + D
Sbjct: 66 HVAIENFGNDANIGAVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQRLRHHETTEDLL 125
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ A + + + + G EG G++ V I Q+
Sbjct: 126 AFADRERLSVVAVDNVPGAARIEEVLLPRECLMIFGQEGPGITEDAKRGAGSVVSIAQF- 184
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 185 GSTRSINAAVAAGIAMHTW 203
>gi|377559528|ref|ZP_09789077.1| putative RNA methyltransferase [Gordonia otitidis NBRC 100426]
gi|377523349|dbj|GAB34242.1| putative RNA methyltransferase [Gordonia otitidis NBRC 100426]
Length = 224
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H S+S+
Sbjct: 76 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLLHHESVSELM 135
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T +V + + L G EG G+S D V I Q+
Sbjct: 136 AWAREEGLAVVAVDNTPGSVPLETADLPRDCVLLFGQEGPGVSDDAQAQADLTVSIAQF- 194
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 195 GSTRSINAGVAAGIAMHAW 213
>gi|118468653|ref|YP_885145.1| spou rRNA methylase [Mycobacterium smegmatis str. MC2 155]
gi|399985150|ref|YP_006565498.1| TRNA/rRNA methyltransferase (SpoU) [Mycobacterium smegmatis str.
MC2 155]
gi|441203404|ref|ZP_20971634.1| spoU rRNA methylase [Mycobacterium smegmatis MKD8]
gi|118169940|gb|ABK70836.1| spou rRNA methylase family protein [Mycobacterium smegmatis str.
MC2 155]
gi|399229710|gb|AFP37203.1| TRNA/rRNA methyltransferase (SpoU) [Mycobacterium smegmatis str.
MC2 155]
gi|440629795|gb|ELQ91576.1| spoU rRNA methylase [Mycobacterium smegmatis MKD8]
Length = 214
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + RH + +D
Sbjct: 66 HIAIENFGSDANIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQRLRHHDTTADLL 125
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ +V + + ++ + G EG G++ + V I Q+
Sbjct: 126 DFADDAGLVVVAVDNVPGSVRLEETELPRNCLLIFGQEGPGITPEAQAGAAVTVSIAQF- 184
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 185 GSTRSINAGVAAGIAMHAW 203
>gi|407685909|ref|YP_006801082.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407289289|gb|AFT93601.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 235
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHSLSDA 63
V + N+ K HNV + R+ A G+ + V + F + GS V + +++DA
Sbjct: 22 VCLENVHKPHNVSAVVRTCDAVGIHRVHTVWEKKYQFRRGTAMGSQQWVRQTNHDNINDA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK + + ++D AVD + K TA L G E G S + + D + IP
Sbjct: 82 MSELKGQGMQVLVTHLSDTAVDFRDIDYTKPTAILFGQEKYGASDEAKAVADHDIVIPMM 141
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 142 -GMVQSLNVSVAAALVLY 158
>gi|220930680|ref|YP_002507589.1| TrmH family RNA methyltransferase [Clostridium cellulolyticum H10]
gi|220001008|gb|ACL77609.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
cellulolyticum H10]
Length = 315
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I+ HN G + R+A A G +I+ RR A S G+ +V ++
Sbjct: 169 IILDEISDPHNFGAILRTANAVGAHGVIIPKRRAIGLTSTVAKASAGAVEYVPVSRVTNI 228
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S +LK + + G + T + K A ++G+EG G+ E CDF V I
Sbjct: 229 SQTIEYLKKNNVWVVGTDSTGEKA-FYESDLKGPIALVVGSEGEGMGKLVREKCDFVVNI 287
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G +SLN +VAA+IV++
Sbjct: 288 PMQ-GEISSLNASVAAAIVMYEI 309
>gi|376288573|ref|YP_005161139.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae BH8]
gi|376294096|ref|YP_005165770.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae HC02]
gi|371585907|gb|AEX49572.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae BH8]
gi|372111419|gb|AEX77479.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae HC02]
Length = 222
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + I ++ T V + + L G EG G++ + + I Q+
Sbjct: 134 AWAKQQGLTIVAIDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDNARMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|258406290|ref|YP_003199032.1| tRNA guanosine-2'-O-methyltransferase [Desulfohalobium retbaense
DSM 5692]
gi|257798517|gb|ACV69454.1| tRNA guanosine-2'-O-methyltransferase [Desulfohalobium retbaense
DSM 5692]
Length = 202
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNF--RHFHSLSD 62
+V++NI HNV + RS AFGV ++ +L F A G S S + RH H+ S+
Sbjct: 32 LVMNNIHDPHNVAAIMRSCDAFGVPDVHLLYTSEAFPALGRRASASARKWVGRHHHTSSE 91
Query: 63 ARV-FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A L+ I + +A + + F TA +LGNE G+ D ++IP
Sbjct: 92 ALAGHLRDHGMRILSTSCSPSARPLPEWEFTSPTAIVLGNEHRGVDPALRSHIDGELFIP 151
Query: 122 QYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDG 156
G S NV+VAA+I+L + + +R R G
Sbjct: 152 M-QGMVQSFNVSVAAAIIL-----YEAWRQRNRHG 180
>gi|68535279|ref|YP_249984.1| rRNA methylase [Corynebacterium jeikeium K411]
gi|68262878|emb|CAI36366.1| putative rRNA methylase [Corynebacterium jeikeium K411]
Length = 227
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + +H ++ +
Sbjct: 79 HIAIENFENDSNIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLQHHATVGEVL 138
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ T V + + L G EG G++ + + V I Q+
Sbjct: 139 EFAAREGLVVVAVDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDAARMTVSIAQF- 197
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 198 GSTRSINAGVAAGIAMHAW 216
>gi|417127057|ref|ZP_11974548.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
97.0246]
gi|386144360|gb|EIG90826.1| SpoU, rRNA methylase, C-terminal domain protein [Escherichia coli
97.0246]
Length = 229
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV E+ V R A + GS+S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAIIRTADAVGVHEVHAVWPGSRMRTMASAAAGSSSWVQVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++DNAVD + + + T L+G E G++ + + D + IP
Sbjct: 82 AVAHLKGQGMQILATHLSDNAVDFREIDYTRPTCILMGQEKTGITEEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|358446260|ref|ZP_09156808.1| putative RNA methyltransferase [Corynebacterium casei UCMA 3821]
gi|356607815|emb|CCE55130.1| putative RNA methyltransferase [Corynebacterium casei UCMA 3821]
Length = 212
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + H S+ +
Sbjct: 64 HIAIENFDHDANIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLMHHDSVGELM 123
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + D + ++ T +V + + L G EG G++ + I Q+
Sbjct: 124 EWARENDLAVVAIDNTPGSVPLETAELPERCLLLFGQEGPGVTEEAQASAKMTCSIAQF- 182
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 183 GSTRSINAGVAAGIAMHAW 201
>gi|336116291|ref|YP_004571057.1| RNA methyltransferase [Microlunatus phosphovorus NM-1]
gi|334684069|dbj|BAK33654.1| putative RNA methyltransferase [Microlunatus phosphovorus NM-1]
Length = 220
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V + N N+G++ R+A AF V+ + ++GRR +N G+ + +++ H ++++
Sbjct: 75 VAIQNWEHDFNIGSIVRTANAFNVAGVHILGRRRWNRRGAMVTDRYLHVHHHATVAEFVE 134
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ ++ I GV+ +V + + + G+EG GL+ + +C V I QY G
Sbjct: 135 VMAAESYVIVGVDNLPGSVPLETARLPERVCLVFGSEGPGLTTELVAVCQQLVAISQY-G 193
Query: 126 GTASLNVTVAASIVLHHFGV-WA 147
T SLN AA+I ++H+ + WA
Sbjct: 194 STRSLNAGAAAAIAMYHWALQWA 216
>gi|257068448|ref|YP_003154703.1| rRNA methylase, putative, group 3 [Brachybacterium faecium DSM
4810]
gi|256559266|gb|ACU85113.1| rRNA methylase, putative, group 3 [Brachybacterium faecium DSM
4810]
Length = 320
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS-----HGSTSHVNFRHFHS 59
V + I N+G + RSA AFG +IL RR + S G+ V +
Sbjct: 168 LVALDGITDPRNLGAILRSADAFGAHGVILPERRSVSMTASVWKVAAGAAGRVRVAQVTN 227
Query: 60 LSDARVFLKSKDCDICGV----EITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
L+ LK +D G+ ++T +++ P ++G EG GLS +ICD
Sbjct: 228 LNRTLTALKEQDVFALGLDAEGDVTTRGLELGTQP----AVLVVGAEGKGLSRLARDICD 283
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
V IP GG SLN +VAA+I L+ +G ER
Sbjct: 284 QVVSIP-MGGRAESLNASVAAAIALYEI---SGVRER 316
>gi|384568028|ref|ZP_10015132.1| rRNA methylase [Saccharomonospora glauca K62]
gi|384523882|gb|EIF01078.1| rRNA methylase [Saccharomonospora glauca K62]
Length = 231
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + +VG+R +N G+ + + + +H ++
Sbjct: 83 HVAIENFQHDHNIGTVVRTANAFAAKAVHIVGKRRWNRRGAMVTDRYQHLQHHADVAGLV 142
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ + V + L G EG GLS V I Q+
Sbjct: 143 RFADEHGLTVVAVDNVPGSEPVETVRLPRECVLLFGQEGPGLSEDAKRAASLVVSIAQF- 201
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA IV+H +
Sbjct: 202 GTTRSINAGVAAGIVMHTW 220
>gi|221134069|ref|ZP_03560374.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola sp. HTCC2999]
Length = 235
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNA-FGSHGSTSHVNFRHFHS-LSDA 63
V++ + K HNV L R+ A G+ E +V ++++ G+ H H HS + A
Sbjct: 22 VLMEEVHKPHNVAALIRTCDAVGIHEAHVVWNQNYSLRVGTSLGAHHWVGMHEHSDIEKA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK + + ++D+AVD + + TA +LG E G + + D + +P
Sbjct: 82 IAHLKGQGMQVLVTNLSDDAVDFREVDYTLPTAIILGQEKFGATKNAIALADKEIVVPMV 141
Query: 124 GGGTASLNVTVAASIVLH 141
G T SLNV+VAA+++L+
Sbjct: 142 -GMTVSLNVSVAAAVILY 158
>gi|407698372|ref|YP_006823159.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Black Sea 11']
gi|407247519|gb|AFT76704.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Black Sea 11']
Length = 235
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHSLSDA 63
V + N+ K HNV + R+ A G+ + V + F + GS V + +++DA
Sbjct: 22 VCLENVHKPHNVSAVVRTCDAVGIHRVHTVWEKKYQFRRGTAMGSQQWVRQTNHDNINDA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK + + ++D AVD + K TA L G E G + + + D + IP
Sbjct: 82 MAELKGQSMQVLVTHLSDTAVDFRDIDYTKPTAILFGQEKYGATDEAKAMADHDIVIPMM 141
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 142 -GMVQSLNVSVAAALVLY 158
>gi|123968010|ref|YP_001008868.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
AS9601]
gi|123198120|gb|ABM69761.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
AS9601]
Length = 223
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLS 61
V+V ++ K HN+ + R+ A GV E + + + FN+ + GS V + +
Sbjct: 24 VLVEDVNKPHNLSAILRTCDAAGVFEANFISKTNAVKTFNS-TAQGSQKWVKLNNHENTI 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK+K + G + +VD + ++T F+LG E GLS + + D ++IP
Sbjct: 83 TAISDLKNKGFKLYGTTLNSESVDYRNFDYSQNTCFVLGAEKWGLSNELISMVDQSIFIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAASI+L
Sbjct: 143 MR-GMVQSLNVSVAASILL 160
>gi|258512689|ref|YP_003186123.1| TrmH family RNA methyltransferase [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479415|gb|ACV59734.1| RNA methyltransferase, TrmH family, group 3 [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 255
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFHSL 60
VV+ IA HN G + R+A A G +++ RR D A + G+ + ++
Sbjct: 110 VVLDEIADPHNFGAILRTAEASGAQGVVIGKRRQAQVTDVVAKAAAGALETLPVARVANV 169
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ A LK I G ++ + V T+ ++ TA ++G+EG G+ E CDF V I
Sbjct: 170 AQALQRLKQAGYWIVGADV-EAKVPYTEVDYRGPTAVVIGSEGQGMRRWVREQCDFLVSI 228
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G SLN +VAA ++L+
Sbjct: 229 PIL-GRVQSLNASVAAGVLLYE 249
>gi|328949678|ref|YP_004367013.1| tRNA guanosine-2'-O-methyltransferase [Marinithermus hydrothermalis
DSM 14884]
gi|328450002|gb|AEB10903.1| tRNA guanosine-2'-O-methyltransferase [Marinithermus hydrothermalis
DSM 14884]
Length = 223
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V++ N+ K HN+ + R+A A GV E V G +N S GS V R ++
Sbjct: 22 VLMENVHKPHNLSAILRTADAVGVYEAHAVNPTGGVPTYNET-SGGSEKWVYLRVHPDIA 80
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK + + ++D AVD + + A LLG E G+S + + D + IP
Sbjct: 81 TAVQHLKERGFLVYAAHLSDEAVDYRAVDYTRPVAVLLGAEKWGVSPEAAALADRHIVIP 140
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 141 MM-GMVQSLNVSVAAAVIL 158
>gi|254527012|ref|ZP_05139064.1| tRNA guanosine-2'-O-methyltransferase [Prochlorococcus marinus str.
MIT 9202]
gi|221538436|gb|EEE40889.1| tRNA guanosine-2'-O-methyltransferase [Prochlorococcus marinus str.
MIT 9202]
Length = 223
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLS 61
V+V ++ K HN+ + R+ A GV E + + + FN+ + GS V + +
Sbjct: 24 VLVEDVNKPHNLSAILRTCDAAGVFEANFISKTNAVKTFNS-TAQGSQKWVKLNNHENTI 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK+K + G + +VD + ++T F+LG E GLS + + D ++IP
Sbjct: 83 TAISDLKNKGFKLYGTTLNSESVDYRNFDYSQNTCFVLGAEKWGLSNELISMVDQSIFIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAASI+L
Sbjct: 143 MR-GMVQSLNVSVAASILL 160
>gi|269137386|ref|YP_003294086.1| tRNA guanosine-2-O-methyltransferase [Edwardsiella tarda EIB202]
gi|387866174|ref|YP_005697643.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Edwardsiella tarda
FL6-60]
gi|267983046|gb|ACY82875.1| tRNA guanosine-2-O-methyltransferase [Edwardsiella tarda EIB202]
gi|304557487|gb|ADM40151.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Edwardsiella tarda
FL6-60]
Length = 219
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGR--RDFNAFGSHGSTSHVNFRHFHSLS 61
V + + K HNV + R+A A GV ++ + G+ R + + GS S VN + ++
Sbjct: 11 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKSMRTLVSTAA-GSNSWVNVKTHRDIA 69
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK + I ++ AVD + + + T L+G E G+SA+ ++ D + IP
Sbjct: 70 TAVGELKGQGMQILATNLSATAVDFREIDYTRPTCILMGQEKRGISAEALQLADRDIIIP 129
Query: 122 QYGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 130 MV-GMVQSLNVSVASALILY 148
>gi|381187079|ref|ZP_09894644.1| RNA methyltransferase, TrmH family [Flavobacterium frigoris PS1]
gi|379650689|gb|EIA09259.1| RNA methyltransferase, TrmH family [Flavobacterium frigoris PS1]
Length = 152
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRR-DFNAFGSHGSTSHVNFRHFHSLSDARVF 66
+ N N+G L R+A G S + +G R A +H + + + H+ + F
Sbjct: 14 IQNGKTPENLGVLWRTAQNLGASYIFTIGNRYAKQACDTHNAVKSIPYFHYENFEG---F 70
Query: 67 LKS--KDCDICGVEITDNAVD--VTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
K+ K + GVE+ DNA D V +HP + +LLG E GLS K E C + V
Sbjct: 71 YKNLPKGARLVGVELDDNATDLEVFEHP--RRCVYLLGAEDNGLSKKAIEKCHYLVKFKS 128
Query: 123 YGGGTASLNVTVAASIVLHHFGV 145
SLNV+VA SIVL+ G+
Sbjct: 129 ----EKSLNVSVAGSIVLYDRGL 147
>gi|449102701|ref|ZP_21739449.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
AL-2]
gi|448966290|gb|EMB46948.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
AL-2]
Length = 258
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
LK + I G + A+ F K T ++GNEG G+S E CD V I
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKAL--PNLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSI 230
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VAA I+L+
Sbjct: 231 PTK-GKLDSLNVSVAAGILLYEI 252
>gi|449107300|ref|ZP_21743956.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ASLM]
gi|451968995|ref|ZP_21922224.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
US-Trep]
gi|448962545|gb|EMB43233.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ASLM]
gi|451702167|gb|EMD56596.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
US-Trep]
Length = 258
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
LK + I G + A+ F K T ++GNEG G+S E CD V I
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKAL--PNLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSI 230
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VAA I+L+
Sbjct: 231 PTK-GKLDSLNVSVAAGILLYEI 252
>gi|326772449|ref|ZP_08231733.1| RNA methyltransferase, TrmH family [Actinomyces viscosus C505]
gi|326637081|gb|EGE37983.1| RNA methyltransferase, TrmH family [Actinomyces viscosus C505]
Length = 218
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N+++ N+G++ RSA AF V+ + ++GRR +N G+ + +++ RH +
Sbjct: 71 HIAIENVSQDLNIGSIVRSANAFNVAGVHIIGRRRWNKRGAMVTNRYLDVRHHPEPGELL 130
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +++ ++ G++ A + + + G+EG G+S + C + I QY
Sbjct: 131 AWARAEGYEVIGIDNGPGAQPLEAADLPERCLMVFGSEGEGISLELSAGCSRLLRIGQY- 189
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV AA++ +H +
Sbjct: 190 GSTRSINVAAAAAVAMHSW 208
>gi|261823688|ref|YP_003261794.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium wasabiae
WPP163]
gi|261607701|gb|ACX90187.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium wasabiae
WPP163]
gi|385874202|gb|AFI92722.1| tRNA guanosine-2'-O-methyltransferase [Pectobacterium sp. SCC3193]
Length = 230
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HNV + R+A A GV ++ + R + GS S V + ++ D
Sbjct: 22 ICMEQVHKPHNVSAVIRTADAVGVHQVHAIWPTSRMKTLVSSAAGSNSWVQVKTHRTIRD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++++AVD + + + T LLG E G++ + ++ D + IP
Sbjct: 82 AVGHLKAEGMQVLATNLSEHAVDFREIDYTRPTCILLGQEKTGITDEALKLADRDIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSA----RQVRRSFCAEKP 178
G SLNV+VA++++L+ ++R R E S Q R F P
Sbjct: 141 MTGMVQSLNVSVASALILYE-------AQRQRQIAGMYRREDSPLDEEEQQRLLFEGGYP 193
Query: 179 ESIIEMRRSRRENASNGFFDGSGNDVSSSSLLDALFTDE 217
+ R ++R+ + D G V+ + A+ + E
Sbjct: 194 ---VLARVAKRKGLPRPYIDHQGQIVADTPWWAAMQSSE 229
>gi|406920118|gb|EKD58239.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 205
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---------------GST 49
++++H+I +NVG + R+A GVS++ L G A G+
Sbjct: 51 FLILHDIRSAYNVGAIFRTADGSGVSKIYLSGYTPAPAEDDKLAKSRADKMIEKTALGAE 110
Query: 50 SHVNFRHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAK 109
V++ L LK ++ I +E D+++D+ ++ K A +LGNE G+
Sbjct: 111 QSVSWEKCDDLGKLLESLKEENFSIVALEKNDDSIDIRKYDKKFPMAIILGNEVDGVDQS 170
Query: 110 ECEICDFFVYIPQYGGGTASLNVTVAASIVLHHF 143
E CD V IP G SLNV+VAA I ++
Sbjct: 171 VLEKCDAVVSIPMR-GKKESLNVSVAAGIAMYEM 203
>gi|251791702|ref|YP_003006423.1| tRNA guanosine-2'-O-methyltransferase [Dickeya zeae Ech1591]
gi|247540323|gb|ACT08944.1| tRNA guanosine-2'-O-methyltransferase [Dickeya zeae Ech1591]
Length = 230
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S V + ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPTSRMKTLVSTAAGSNSWVQVKTHRTIQD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I ++ AVD + + T LLG E G+SA + D + IP
Sbjct: 82 AVGHLKMQGMQILATNLSAGAVDFRDVDYTRPTCILLGQEKTGISADALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|442609376|ref|ZP_21024114.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
gi|441749133|emb|CCQ10176.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Pseudoalteromonas
luteoviolacea B = ATCC 29581]
Length = 233
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HN+ + R+A A G + V RR S GS + V + S+ D
Sbjct: 22 VCLEEVHKHHNLSAIIRTADAVGCHYIHAVWPHDRRRTTNNTSGGSKNWVETKLHRSIED 81
Query: 63 ARVFLKSKD--CDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A V ++ + I ++D AVD + + K TA ++G E +G+S K + D + +
Sbjct: 82 AVVDMRETNPGLQILATNLSDKAVDFREIDYTKPTAIIVGQEKLGISDKALALADHHIVV 141
Query: 121 PQYGGGTASLNVTVAASIVLHHFG---VWAGFSERT 153
P G SLNV+VA +++L+ AG ERT
Sbjct: 142 PM-EGMVQSLNVSVATALILYEAQRQRAAAGLYERT 176
>gi|419861603|ref|ZP_14384230.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
gi|387981882|gb|EIK55415.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae bv. intermedius str. NCTC 5011]
Length = 222
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + I ++ T V + + L G EG G++ + + I Q+
Sbjct: 134 AWAKQQGLAIVAIDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDNARMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|376255141|ref|YP_005143600.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae PW8]
gi|372118225|gb|AEX70695.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae PW8]
Length = 222
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + I ++ T V + + L G EG G++ + + I Q+
Sbjct: 134 AWAKQQGLAIVAIDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDNARMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|315654256|ref|ZP_07907164.1| rRNA methylase [Mobiluncus curtisii ATCC 51333]
gi|315491291|gb|EFU80908.1| rRNA methylase [Mobiluncus curtisii ATCC 51333]
Length = 230
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V + N+ N G++ R+A GV + +VGRR FN G+ + +++ H + D
Sbjct: 83 VAIENVGHDFNTGSIIRTANGLGVRHVHIVGRRRFNRRGAMVTDRYLHLHHHPEVQDLVS 142
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ ++ I G++ A + T + G E GL+ + V I QY G
Sbjct: 143 YAVQQELTIVGMDNFPGAEPLETVTLPSRTLMVFGEESQGLTPAMQNALERLVQITQY-G 201
Query: 126 GTASLNVTVAASIVLHHFGVWA 147
T SLNV AA+I G+WA
Sbjct: 202 STRSLNVGHAAAI-----GIWA 218
>gi|375138507|ref|YP_004999156.1| rRNA methylase [Mycobacterium rhodesiae NBB3]
gi|359819128|gb|AEV71941.1| rRNA methylase [Mycobacterium rhodesiae NBB3]
Length = 213
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+G + R+A AF V + +VGRR +N G+ + + RH + +D
Sbjct: 65 HIAIENFGNDANIGAVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQRLRHHDTTADLL 124
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + V+ A + P + + G EG G++ + V I Q+
Sbjct: 125 AYATEAGLTVVAVDNVPGASRLESTPLPRECLMIFGQEGPGITDEARAGAAVTVSIAQF- 183
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 184 GSTRSINAGVAAGIAMHAW 202
>gi|449131211|ref|ZP_21767427.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
SP37]
gi|448940044|gb|EMB20955.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
SP37]
Length = 258
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
LK + I G + A+ F K T ++GNEG G+S E CD V I
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKAL--PNLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSI 230
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VAA I+L+
Sbjct: 231 PTK-GKLDSLNVSVAAGILLYEI 252
>gi|297545334|ref|YP_003677636.1| TrmH family RNA methyltransferase [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296843109|gb|ADH61625.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 249
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + RSA AFGV +I+ RR S G+ H+ ++
Sbjct: 101 LILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMKIAKVSNI 160
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++ LK + I G ++ + + + A ++GNEG G+S + CDF V I
Sbjct: 161 NNTIRNLKERGLWIVGTDV-NGGKSFEEIDYDFPVALVIGNEGKGVSKLVLQNCDFVVKI 219
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G SLN +VAAS++++
Sbjct: 220 PMK-GKINSLNASVAASLLVYQ 240
>gi|237784924|ref|YP_002905629.1| putative rRNA methylase [Corynebacterium kroppenstedtii DSM 44385]
gi|237757836|gb|ACR17086.1| putative rRNA methylase [Corynebacterium kroppenstedtii DSM 44385]
Length = 239
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N HN+GT+ R+A AF + +VG++ +N G+ + + + H +++D
Sbjct: 91 HVAIENFTSDHNIGTVVRTANAFAAEAVHIVGKKRWNRRGAMVTDRYQHLYHHSTVNDVL 150
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ D + V+ +V V + L G EG G+S + V I Q+
Sbjct: 151 QWAHEHDLTVIAVDNVPGSVPVETAELPERCLLLFGQEGPGVSEEAQRGAVQTVSIAQF- 209
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 210 GSTRSINAGVAAGIAMHAW 228
>gi|269121680|ref|YP_003309857.1| TrmH family RNA methyltransferase [Sebaldella termitidis ATCC
33386]
gi|268615558|gb|ACZ09926.1| RNA methyltransferase, TrmH family, group 3 [Sebaldella termitidis
ATCC 33386]
Length = 234
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 7/140 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
+V+ I N G + RSA FGV +I+ R + S G+ HV+ ++
Sbjct: 90 LVLDQIQDPRNFGAIIRSAECFGVDGIIIQDRNSVSVTETVVKSSTGAIEHVDIIKVTNV 149
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD+ LK I G E D + PF + +LG+EG G+ K E CD + I
Sbjct: 150 SDSMDKLKKYGYFIYGAE-ADGETEYYNEPFPEKLCLVLGSEGKGMRKKVKEHCDKILNI 208
Query: 121 PQYGGGTASLNVTVAASIVL 140
P + G SLNV+VA I+L
Sbjct: 209 PMH-GKINSLNVSVANGILL 227
>gi|422341944|ref|ZP_16422884.1| RNA methyltransferase [Treponema denticola F0402]
gi|325474012|gb|EGC77200.1| RNA methyltransferase [Treponema denticola F0402]
Length = 258
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAV-DVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LK + I G + A+ D+T F K T ++G+EG G+S E CD V
Sbjct: 173 VRTVERLKKEGFWIYGADAVGKALPDLT---FPKKTVLIMGSEGRGMSRLVEETCDEIVS 229
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G SLNV+VAA I+L+
Sbjct: 230 IPTK-GKLDSLNVSVAAGILLYEI 252
>gi|452994189|emb|CCQ94248.1| 23S rRNA methyltransferase [Clostridium ultunense Esp]
Length = 248
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
+++ I HN+G + R+A GV +I+ RR + S G+ H+ +++
Sbjct: 99 IILDGIEDPHNLGAIIRTAECGGVHGIIIPKRRAAHVTPAVYKSSAGAVEHIMISKVNNI 158
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK K I G +I D K A ++G+EG G+S E CDF + I
Sbjct: 159 SDTIEKLKEKGLWIYGADI-DGEEYYFNIDLKGPIALVIGSEGKGISRLVKEKCDFILKI 217
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
P G +SLN + AASI+++ V G+ E+
Sbjct: 218 PML-GKVSSLNASNAASILIYEV-VKQGYEEK 247
>gi|42526951|ref|NP_972049.1| RNA methyltransferase [Treponema denticola ATCC 35405]
gi|449111993|ref|ZP_21748548.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ATCC 33521]
gi|449113203|ref|ZP_21749718.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ATCC 35404]
gi|41817266|gb|AAS11960.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ATCC 35405]
gi|448956274|gb|EMB37035.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ATCC 33521]
gi|448960783|gb|EMB41492.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ATCC 35404]
Length = 258
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
LK + I G + A+ F K T ++GNEG G+S E CD V I
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKAL--PNLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSI 230
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VAA I+L+
Sbjct: 231 PTK-GKLDSLNVSVAAGILLYEI 252
>gi|376252152|ref|YP_005139033.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae HC03]
gi|372113656|gb|AEX79715.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae HC03]
Length = 222
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + I ++ T V + + L G EG G++ + + I Q+
Sbjct: 134 AWAKQQGLAIVAIDNTPGCVSLETAELPERCLLLFGQEGPGVTQEAQDNARMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|376249384|ref|YP_005141328.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae HC04]
gi|376291263|ref|YP_005163510.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae C7 (beta)]
gi|372104659|gb|AEX68256.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae C7 (beta)]
gi|372115952|gb|AEX82010.1| 23S rRNA guanosine-2'-O-methyltransferase rlmB [Corynebacterium
diphtheriae HC04]
Length = 222
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 74 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + I ++ T V + + L G EG G++ + + I Q+
Sbjct: 134 AWAKQQGLAIVAIDNTPGCVSLETAELPERCLLLFGQEGPGVTQEAQDNARMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|189346347|ref|YP_001942876.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium limicola DSM 245]
gi|189340494|gb|ACD89897.1| tRNA guanosine-2'-O-methyltransferase [Chlorobium limicola DSM 245]
Length = 219
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH----GSTSHVNFRHFHSLS 61
VV+ N+ K HN+ L RS A G+ E+ V RR + F H GS+ VN +H +
Sbjct: 23 VVMDNVNKSHNLAALVRSCDAAGIHEIHAVSRRK-HIFTRHNAAAGSSKWVNINLYHDIE 81
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
L+ + T+ +VD + + TA +LG E G+S D + +P
Sbjct: 82 SVYRRLRDDGMQVLAAASTEKSVDFREIDYTLPTALILGAEWDGISEDAISGADRCIGVP 141
Query: 122 QYGGGTASLNVTVAASIVLH 141
+ G SLNV+VA +++++
Sbjct: 142 MF-GMVESLNVSVAGAVIIY 160
>gi|429462763|ref|YP_007184226.1| 23S rRNA (guanosine2251-2'-O)-methyltransferase [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811489|ref|YP_007447944.1| TrmH family RNA methyltransferase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|429338277|gb|AFZ82700.1| 23S rRNA (guanosine2251-2'-O)-methyltransferase [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776647|gb|AGF47646.1| TrmH family RNA methyltransferase [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 246
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAFGSHGSTSHVNFRHFHSLSD- 62
+++ + HN+G R+A A GV +I R N S+ + + +++
Sbjct: 99 LILDGVTDPHNLGACLRTANAAGVHAVIAPRNRSASINDIVYKVSSGAADITPYIMVTNL 158
Query: 63 ARVFLKSKDCDICGVEITDNAVD-VTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
ARV KD D+C V +NAV+ + KS A++LG+EG G+ E CD+ V IP
Sbjct: 159 ARVLRDLKDMDVCLVGTDENAVNNIYTVNATKSMAWVLGSEGKGMRRLTRESCDYLVNIP 218
Query: 122 QYGGGTASLNVTVAASIVLH 141
G SLNV+VA+S+ L+
Sbjct: 219 ML-GAVESLNVSVASSLCLY 237
>gi|113953546|ref|YP_729908.1| tRNA/rRNA methyltransferase [Synechococcus sp. CC9311]
gi|113880897|gb|ABI45855.1| tRNA/rRNA methyltransferase [Synechococcus sp. CC9311]
Length = 229
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSE---MILVGR-RDFNAFGSHGSTSHVNFRHFHSLS 61
V+V ++ K HN+ + RS A GV E + L GR R +N+ + GS V ++
Sbjct: 24 VLVEHVDKPHNLSAILRSCDAVGVLEAHAVSLSGRSRTYNS-TAQGSQRWVPLHSHPNIE 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+A LK + + G ++ +A+D F TAF+LG E GLS ++ D V+IP
Sbjct: 83 EAVKTLKDRGFHLYGTNLSVDALDYRDCDFTGPTAFVLGAEKWGLSENATKLMDTDVFIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VA + +L
Sbjct: 143 MR-GMVQSLNVSVATATLL 160
>gi|86610253|ref|YP_479015.1| RNA methyltransferase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558795|gb|ABD03752.1| RNA methyltransferase, TrmH family, group 3 [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 378
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
VV+ I HN+G +ARS AFG+ M++ RR A G + V +L ARV
Sbjct: 202 VVLDGIQDPHNLGAIARSVEAFGMQGMVIPQRR---AAGVTSTVMKVAAGALSTLPVARV 258
Query: 66 --------FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+LK + + G + A + F++ A ++G+EG G+S CD
Sbjct: 259 VNLNRALEYLKEQGFWVYGT-TSRGADPIYSADFQRPIALVVGSEGEGISLLTQRHCDQL 317
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IP G T SLN +VAA I L+
Sbjct: 318 LSIP-LAGRTESLNASVAAGIALYEI 342
>gi|333921714|ref|YP_004495295.1| putative RNA methyltransferase [Amycolicicoccus subflavus DQS3-9A1]
gi|333483935|gb|AEF42495.1| putative RNA methyltransferase [Amycolicicoccus subflavus DQS3-9A1]
Length = 222
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H S+ +
Sbjct: 74 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHIHHHASVDELL 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +S+ + V+ T +V + ++ L G EG G+S + ++ V I Q+
Sbjct: 134 GYARSEGLTVVAVDNTPGSVRLETATLPRACMLLFGQEGPGISERARDVATMTVSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSVNAGVAAGIAMHAW 211
>gi|251809948|ref|ZP_04824421.1| RNA methyltransferase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875018|ref|ZP_06283893.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis SK135]
gi|417646089|ref|ZP_12295968.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU144]
gi|417657362|ref|ZP_12307027.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU028]
gi|417914039|ref|ZP_12557694.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU109]
gi|418326364|ref|ZP_12937550.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU071]
gi|418412972|ref|ZP_12986219.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis BVS058A4]
gi|418617758|ref|ZP_13180649.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU120]
gi|418629613|ref|ZP_13192110.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU127]
gi|418664644|ref|ZP_13226111.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU081]
gi|419772814|ref|ZP_14298840.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-K]
gi|251806491|gb|EES59148.1| RNA methyltransferase [Staphylococcus epidermidis BCM-HMP0060]
gi|281296346|gb|EFA88865.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis SK135]
gi|329729435|gb|EGG65838.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU144]
gi|329734667|gb|EGG70974.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU028]
gi|341653870|gb|EGS77635.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU109]
gi|365225775|gb|EHM67013.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU071]
gi|374410300|gb|EHQ81059.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU081]
gi|374818185|gb|EHR82357.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU120]
gi|374833376|gb|EHR97064.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU127]
gi|383358907|gb|EID36349.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-K]
gi|410879565|gb|EKS27406.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis BVS058A4]
Length = 255
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 102 TVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 161
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK I G E +NA D S ++G+EG G+S + CDF +
Sbjct: 162 NLSKTIDELKDNGFWIAGTE-ANNATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHI 220
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 221 KIPMV-GHVNSLNASVAASLMMY 242
>gi|419770330|ref|ZP_14296410.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-250]
gi|383357276|gb|EID34751.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus aureus
subsp. aureus IS-250]
Length = 255
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 102 TVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 161
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK I G E +NA D S ++G+EG G+S + CDF +
Sbjct: 162 NLSKTIDELKDNGFWIAGTE-ANNATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHI 220
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 221 KIPMV-GHVNSLNASVAASLMMY 242
>gi|261250548|ref|ZP_05943123.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|417953408|ref|ZP_12596454.1| tRNA guanosine-2'-O-methyltransferase [Vibrio orientalis CIP 102891
= ATCC 33934]
gi|260939117|gb|EEX95104.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio orientalis CIP
102891 = ATCC 33934]
gi|342817282|gb|EGU52166.1| tRNA guanosine-2'-O-methyltransferase [Vibrio orientalis CIP 102891
= ATCC 33934]
Length = 227
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDARV 65
+ + K +NV + R+A A G+ ++ V + S G+ + V+ ++ DA
Sbjct: 24 LEEVHKPNNVSAVIRTADATGIHKVHAVWPHEMRTLSHTSAGARNWVDVETHDNIEDAIA 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LK++ + ++D AVD + + K TA +LG+E +G S K ++ D + +P G
Sbjct: 84 ELKAQGMQVLVTNLSDTAVDFREIDYTKPTAIILGSEKVGASEKAKQLADQDIIVPMV-G 142
Query: 126 GTASLNVTVAASIVLH 141
SLNV+VA++++L+
Sbjct: 143 MVQSLNVSVASAVILY 158
>gi|170747977|ref|YP_001754237.1| RNA methyltransferase [Methylobacterium radiotolerans JCM 2831]
gi|170654499|gb|ACB23554.1| RNA methyltransferase, TrmH family, group 3 [Methylobacterium
radiotolerans JCM 2831]
Length = 281
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 10 NIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSLSDAR 64
I HNVG + R+A AFGV+ ++ R A G + G HV F +L++A
Sbjct: 140 QITDPHNVGAIVRTAAAFGVAGIVTTARHAPGATGVLAKSASGGLEHVPFVTVRNLAEAL 199
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ L + G++ +D + + +LG EG GL + CD IP +
Sbjct: 200 IELGERGFTRVGLD-SDAPESLDALTVARPLVIVLGAEGKGLRERTRGCCDVLARIP-FS 257
Query: 125 GGTASLNVTVAASIVLHHFG 144
G SLNV+ AA+I L+ G
Sbjct: 258 GAIRSLNVSNAAAITLYALG 277
>gi|452994662|emb|CCQ93772.1| 23S rRNA methyltransferase [Clostridium ultunense Esp]
Length = 249
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ RSA G+ +++ RR A S G+ +V +
Sbjct: 99 FIMLDGIEDPHNLGSILRSADGAGLHGVMIPKRRAAPLTPAVAKSSAGAIEYVPVARITN 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS A LK + G + + D + + + T ++GNEG G+S E CDF V
Sbjct: 159 LSQAIDELKENGFWVIGTD-ANAKTDYREADYTRPTLLVIGNEGKGISRLVKEKCDFLVK 217
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G +SLN +VAA+++++
Sbjct: 218 LPMM-GKVSSLNASVAAALLMYE 239
>gi|27467212|ref|NP_763849.1| tRNA/rRNA methyltransferase [Staphylococcus epidermidis ATCC 12228]
gi|242241863|ref|ZP_04796308.1| RNA methyltransferase [Staphylococcus epidermidis W23144]
gi|293367907|ref|ZP_06614545.1| RNA methyltransferase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417658264|ref|ZP_12307900.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU045]
gi|417910374|ref|ZP_12554096.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU037]
gi|417911494|ref|ZP_12555199.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU105]
gi|418604266|ref|ZP_13167624.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU041]
gi|418606466|ref|ZP_13169743.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU057]
gi|418609572|ref|ZP_13172714.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU065]
gi|418611853|ref|ZP_13174916.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU117]
gi|418621537|ref|ZP_13184306.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU123]
gi|418624686|ref|ZP_13187356.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU125]
gi|418626345|ref|ZP_13188958.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU126]
gi|27314754|gb|AAO03891.1|AE016744_294 putative tRNA/rRNA methyltransferase [Staphylococcus epidermidis
ATCC 12228]
gi|242234641|gb|EES36953.1| RNA methyltransferase [Staphylococcus epidermidis W23144]
gi|291317936|gb|EFE58344.1| RNA methyltransferase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329738058|gb|EGG74279.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU045]
gi|341650549|gb|EGS74369.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU037]
gi|341653071|gb|EGS76844.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU105]
gi|374405283|gb|EHQ76225.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU041]
gi|374406899|gb|EHQ77774.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU065]
gi|374407873|gb|EHQ78718.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU057]
gi|374821368|gb|EHR85431.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU117]
gi|374826883|gb|EHR90759.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU125]
gi|374828768|gb|EHR92593.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU123]
gi|374832902|gb|EHR96605.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU126]
Length = 255
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 102 TVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 161
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK I G E +NA D S ++G+EG G+S + CDF +
Sbjct: 162 NLSKTIDELKDNGFWIAGTE-ANNATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHI 220
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 221 KIPMV-GHVNSLNASVAASLMMY 242
>gi|70923352|ref|XP_734698.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56507678|emb|CAH88803.1| hypothetical protein PC300153.00.0 [Plasmodium chabaudi chabaudi]
Length = 105
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGR--RDFNAFGSHGSTSHVNFRHFHSLSD 62
YVV++NI K+ N+G + RS AF VSE+ +VGR ++ + FGS G+ ++ R+F ++ +
Sbjct: 28 YVVIYNIGKKKNIGNIVRSCVAFNVSEIFVVGRNKKETSFFGSMGTHGYIKIRYFTNMIE 87
Query: 63 ARVFLKSKDCDICGVEIT 80
+ +L + D + EIT
Sbjct: 88 LKQYLNNNDILLYACEIT 105
>gi|392557337|ref|ZP_10304474.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas undina
NCIMB 2128]
Length = 228
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 14/213 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNF--RHFH-SLSD 62
V + ++ K HN+ + R+A A G + V ++ S N+ H H ++ D
Sbjct: 22 VCLEDVHKHHNLSAIVRTADAVGCHHVHAVWPEKQKWLTNNTSGGSKNWLDTHLHRNIDD 81
Query: 63 ARVFLKS--KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A +++ D I ++++AVD + + K TA ++G E G+S + E D + I
Sbjct: 82 AVASMRAHNPDVQILATHLSEDAVDFREIDYTKPTAIIVGQEKTGISPQALEYADQNIII 141
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPES 180
P G SLNV+VAA+++L ++R RD + +++ E
Sbjct: 142 P-MQGMVQSLNVSVAAALILFE-------AQRQRDLAGLYNRNMLSEEIKHPMYFEGCHP 193
Query: 181 IIEMRRSRRENASNGFFDGSGNDVSSSSLLDAL 213
II R+ +++N D +G V+ AL
Sbjct: 194 II-ARQCKQKNLPYPALDENGEIVADEQFWQAL 225
>gi|57866117|ref|YP_187768.1| RNA methyltransferase [Staphylococcus epidermidis RP62A]
gi|420166787|ref|ZP_14673467.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM088]
gi|420172251|ref|ZP_14678761.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM067]
gi|420175663|ref|ZP_14682097.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM061]
gi|420182223|ref|ZP_14688361.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM049]
gi|420188154|ref|ZP_14694168.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM039]
gi|420195778|ref|ZP_14701565.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM021]
gi|420196763|ref|ZP_14702502.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM020]
gi|420202997|ref|ZP_14708583.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM018]
gi|420207048|ref|ZP_14712551.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM008]
gi|420218746|ref|ZP_14723800.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH04008]
gi|420222646|ref|ZP_14727563.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH08001]
gi|420225503|ref|ZP_14730333.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH06004]
gi|420226420|ref|ZP_14731204.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH05003]
gi|420228739|ref|ZP_14733456.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH04003]
gi|420231107|ref|ZP_14735762.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH051668]
gi|81675394|sp|Q5HRM1.1|TRMHL_STAEQ RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|90110722|sp|Q8CTT9.2|TRMHL_STAES RecName: Full=Putative TrmH family tRNA/rRNA methyltransferase
gi|57636775|gb|AAW53563.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis RP62A]
gi|394232707|gb|EJD78320.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM088]
gi|394242841|gb|EJD88219.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM061]
gi|394242891|gb|EJD88268.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM067]
gi|394250207|gb|EJD95401.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM049]
gi|394255414|gb|EJE00365.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM039]
gi|394262899|gb|EJE07651.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM021]
gi|394267265|gb|EJE11866.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM020]
gi|394268870|gb|EJE13421.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM018]
gi|394276368|gb|EJE20709.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM008]
gi|394288908|gb|EJE32806.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH08001]
gi|394291820|gb|EJE35605.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH04008]
gi|394293570|gb|EJE37284.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH06004]
gi|394298796|gb|EJE42358.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH05003]
gi|394300202|gb|EJE43718.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH04003]
gi|394303182|gb|EJE46610.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH051668]
Length = 249
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 96 TVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 155
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK I G E +NA D S ++G+EG G+S + CDF +
Sbjct: 156 NLSKTIDELKDNGFWIAGTE-ANNATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHI 214
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 215 KIPMV-GHVNSLNASVAASLMMY 236
>gi|397689376|ref|YP_006526630.1| RNA methyltransferase, TrmH family, group 3 [Melioribacter roseus
P3M]
gi|395810868|gb|AFN73617.1| RNA methyltransferase, TrmH family, group 3 [Melioribacter roseus
P3M]
Length = 247
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFHSL 60
+++ + HN+G + R+A GV +IL + A S G+ SH+ +L
Sbjct: 96 LILDTLQDTHNLGAVLRTAECAGVDGVILTSNNSAPVNETVAKISAGALSHLKISRVANL 155
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+LK K I G +T+ +V+ + A ++GNE G+ E CDF V I
Sbjct: 156 MQPIKYLKEKGFWIVGAHLTEKSVNYDTIDYSGPIALIMGNEEKGIRRLVAEECDFIVKI 215
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLNV+VA ++L
Sbjct: 216 PM-KGKIDSLNVSVATGVIL 234
>gi|383816798|ref|ZP_09972188.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. M24T3]
gi|383294327|gb|EIC82671.1| tRNA guanosine-2'-O-methyltransferase [Serratia sp. M24T3]
Length = 231
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV+E+ V R + G+ S V + ++ +
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVNEVHAVWPTSRMKTQGSFAAGANSWVQVKTHKTIQE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +K+ I +++ AVD + + T LLG E G++ + + D + IP
Sbjct: 82 AVAKMKAMGMQILATNLSEKAVDFRAIDYTRPTCILLGQEKTGITPEALALADSDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLHH 142
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILYE 160
>gi|420164367|ref|ZP_14671097.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM095]
gi|420169347|ref|ZP_14675948.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM087]
gi|420171645|ref|ZP_14678183.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM070]
gi|420186446|ref|ZP_14692514.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM040]
gi|420208682|ref|ZP_14714140.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM003]
gi|420213827|ref|ZP_14719109.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH05005]
gi|420218201|ref|ZP_14723299.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH05001]
gi|421607881|ref|ZP_16049115.1| tRNA/rRNA methyltransferase [Staphylococcus epidermidis AU12-03]
gi|394231377|gb|EJD77007.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM087]
gi|394231756|gb|EJD77379.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM095]
gi|394237107|gb|EJD82602.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM070]
gi|394252162|gb|EJD97203.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM040]
gi|394281383|gb|EJE25632.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM003]
gi|394284225|gb|EJE28379.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH05005]
gi|394284681|gb|EJE28783.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH05001]
gi|406656495|gb|EKC82900.1| tRNA/rRNA methyltransferase [Staphylococcus epidermidis AU12-03]
Length = 249
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 96 TVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 155
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK I G E +NA D S ++G+EG G+S + CDF +
Sbjct: 156 NLSKTIDELKDNGFWIAGTE-ANNATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHI 214
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 215 KIPMV-GHVNSLNASVAASLMMY 236
>gi|16331014|ref|NP_441742.1| hypothetical protein slr0955 [Synechocystis sp. PCC 6803]
gi|383322757|ref|YP_005383610.1| hypothetical protein SYNGTI_1848 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325926|ref|YP_005386779.1| hypothetical protein SYNPCCP_1847 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491810|ref|YP_005409486.1| hypothetical protein SYNPCCN_1847 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437077|ref|YP_005651801.1| hypothetical protein SYNGTS_1848 [Synechocystis sp. PCC 6803]
gi|451815172|ref|YP_007451624.1| hypothetical protein MYO_118650 [Synechocystis sp. PCC 6803]
gi|3915411|sp|P74328.1|Y955_SYNY3 RecName: Full=Uncharacterized tRNA/rRNA methyltransferase slr0955
gi|1653509|dbj|BAA18422.1| slr0955 [Synechocystis sp. PCC 6803]
gi|339274109|dbj|BAK50596.1| hypothetical protein SYNGTS_1848 [Synechocystis sp. PCC 6803]
gi|359272076|dbj|BAL29595.1| hypothetical protein SYNGTI_1848 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275246|dbj|BAL32764.1| hypothetical protein SYNPCCN_1847 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278416|dbj|BAL35933.1| hypothetical protein SYNPCCP_1847 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961619|dbj|BAM54859.1| hypothetical protein BEST7613_5928 [Bacillus subtilis BEST7613]
gi|451781141|gb|AGF52110.1| hypothetical protein MYO_118650 [Synechocystis sp. PCC 6803]
Length = 384
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS-----HGSTSHVNFRHFHSL 60
+++ +I HN+G + R+A AFG M+L RR + G+ H +L
Sbjct: 220 IIIDSITDPHNLGAIIRTAEAFGAQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNL 279
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S A LK I G + + Q ++ ++G+EG GLS + CD + I
Sbjct: 280 SRALETLKESGFWIYGT-VAGKQTALHQADLREPMGLVIGSEGEGLSLLTQKHCDHLITI 338
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERT 153
P G T SLN +VAA+I L+ GF T
Sbjct: 339 P-LAGKTPSLNASVAAAISLYEIFRQRGFDRPT 370
>gi|398797253|ref|ZP_10556576.1| rRNA methylase [Pantoea sp. GM01]
gi|398103373|gb|EJL93543.1| rRNA methylase [Pantoea sp. GM01]
Length = 231
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R S GS S V + +++
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSVRMRTMVSASAGSNSWVKVKTHRHIAE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ AVD + + K T L+G E G++A+ + D + +P
Sbjct: 82 AVRHLKDEGMQVLATNLSAKAVDFREVDYTKPTCILMGQEKTGITAEALALADQDIIVPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|374328473|ref|YP_005078657.1| tRNA/rRNA methyltransferase SpoU [Pseudovibrio sp. FO-BEG1]
gi|359341261|gb|AEV34635.1| tRNA/rRNA methyltransferase (SpoU) [Pseudovibrio sp. FO-BEG1]
Length = 186
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 18/139 (12%)
Query: 11 IAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFHSLSDAR 64
++K NVGTL R+ AFG S V GS S H+ + ++S+ + +
Sbjct: 12 LSKSMNVGTLMRTGHAFGASYFFTVDAH-IKGLGSAMKADTSKSPDHLPYFAWNSVDEMQ 70
Query: 65 VFLKSKDCDICGVEITDNAVDVTQ--HPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ C + GVE+TD+A+++ HP + A++LG E LS + E CD+ V IP
Sbjct: 71 F---PRGCKLVGVELTDDAIELPSFGHPLQ--AAYILGPERGSLSKEMQERCDYIVKIPT 125
Query: 123 YGGGTASLNVTVAASIVLH 141
LNV VAA++VL+
Sbjct: 126 ----KFCLNVGVAAALVLY 140
>gi|420213014|ref|ZP_14718355.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM001]
gi|394277262|gb|EJE21588.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM001]
Length = 249
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 96 TVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 155
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK I G E +NA D S ++G+EG G+S + CDF +
Sbjct: 156 NLSKTIDELKDNGFWIAGTE-ANNATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHI 214
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 215 KIPMV-GHVNSLNASVAASLMMY 236
>gi|410637548|ref|ZP_11348126.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola lipolytica E3]
gi|410142910|dbj|GAC15331.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola lipolytica E3]
Length = 228
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV------GRRDFNAFGSHGSTSHVNFRHFHS 59
V + + K HNV + RS A G+ ++ V G R A GS + V + S
Sbjct: 22 VCLEQVHKPHNVSAVVRSCDAVGIHKVHAVWDDKTKGLRGGTAMGSQ---NWVYVENHDS 78
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ DA LK++ + ++D+AVD + K TA +LG E G + + ++ D +
Sbjct: 79 IEDAIGHLKNQKMQVLVTHLSDSAVDFRDVDYSKPTAIILGQEKHGATQEAIDLADQEIV 138
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IP G SLNV+VAA++VL+
Sbjct: 139 IPMV-GMVQSLNVSVAAALVLY 159
>gi|404422061|ref|ZP_11003762.1| hypothetical protein MFORT_16544 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403658358|gb|EJZ13099.1| hypothetical protein MFORT_16544 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 178
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 4 SYVVVHNIAKRH--NVGTLARSATAFGVSEMILVGRRDF--NAFGSHGSTSHVNFRHFHS 59
++++V + +H N+GTL R+ A G + V R + A + H + H+
Sbjct: 31 NHIIVTPLWPKHGVNLGTLLRTCDAVGAC--LAVPRLPWVPEALRKGNTLRHRSCVHWIY 88
Query: 60 LSDARVFLKSKD--CDICGVEITDNAVDVTQHPF-KKSTAFLLGNEGMGLSAKECEICDF 116
R K ++ I GVE+TD ++ + + P ++ T +LGNEG G+ + E+ D
Sbjct: 89 GDVIRWLEKQRERSAHIVGVELTDESIRLAELPAARRRTVVVLGNEGSGIPSDAMELLDL 148
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
V IP G G SLNV VA S+VL+
Sbjct: 149 AVEIPMLGSGH-SLNVAVAGSLVLY 172
>gi|38234645|ref|NP_940412.1| RNA methylase [Corynebacterium diphtheriae NCTC 13129]
gi|38200909|emb|CAE50624.1| Putative RNA methylase family protein [Corynebacterium diphtheriae]
Length = 172
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H + +D
Sbjct: 24 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLMHHPTTADVV 83
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + I ++ T V + + L G EG G++ + + I Q+
Sbjct: 84 AWAKQQGLTIVAIDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDNARMTCSIAQF- 142
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 143 GSTRSINAGVAAGIAMHAW 161
>gi|357589827|ref|ZP_09128493.1| putative rRNA methylase [Corynebacterium nuruki S6-4]
Length = 233
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGR+ +N G+ + + + H
Sbjct: 85 HIAIENFGNDSNIGTVVRTANAFAVDTVHIVGRKRWNRRGAMVTDRYQHLLHHPDTPSVT 144
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + V+ T +V + + L G EG G++ + E V I Q+
Sbjct: 145 AYAAAHGLTVVAVDNTPGSVPLETAELPERCLLLFGQEGPGVTPEAQEAAAMTVSIAQF- 203
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 204 GSTRSINAGVAAGIAMHTW 222
>gi|227510713|ref|ZP_03940762.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227189834|gb|EEI69901.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 255
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
+V++ NI HN+G++ R+A A GVS +I+ VG A S G+ V +
Sbjct: 105 FVILDNIEDPHNLGSIIRTADAAGVSGIIIPKHRAVGLTAVVAKTSAGAIERVPVARVTN 164
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LKS+ + G +I D + K S A ++GNEG G+S + D +
Sbjct: 165 LAATIKELKSRGMWVFGTDI--EGTDYRRWDAKGSVAIIIGNEGKGISPLLKKQVDEMLT 222
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GF+ R
Sbjct: 223 IPMV-GDIQSLNASVAASVLIYQ-----GFNSR 249
>gi|291326958|ref|ZP_06126486.2| tRNA guanosine-2'-O-methyltransferase [Providencia rettgeri DSM
1131]
gi|291312042|gb|EFE52495.1| tRNA guanosine-2'-O-methyltransferase [Providencia rettgeri DSM
1131]
Length = 226
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+ I K HNV + RSA A G+ ++ + + + + GS S V S +A
Sbjct: 13 LEEIHKPHNVSAIVRSADAVGIHQIHAIWPDQQVKLSVSSAAGSNSWVKIISHTSTEEAI 72
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+KS++ + ++++AVD + + T ++G E G+S + + D + IP
Sbjct: 73 AHIKSQNMQVLATNLSEHAVDFREIDYTLPTCIMMGQEKTGISQQALALADKHIIIP-MA 131
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 132 GMVQSLNVSVASALILY 148
>gi|443632195|ref|ZP_21116375.1| putative RNA methylase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443348310|gb|ELS62367.1| putative RNA methylase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 248
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ ++L G +AF + GS H+ R+ H+ D L
Sbjct: 117 NLGTMIRTADAAGLDAVVL-GDGTADAFNGKTLRSAQGSHFHIPVVRRNLHTYVDE---L 172
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
K++ + G + N P +S A ++GNEG G+ A E D +Y+P YG
Sbjct: 173 KAEGVKVYGTAL-QNGAPYRDMPQAESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAE 231
Query: 128 ASLNVTVAASIVLHHF 143
SLNV +AA+I+++H
Sbjct: 232 -SLNVAIAAAILVYHL 246
>gi|332139565|ref|YP_004425303.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Deep ecotype']
gi|410859798|ref|YP_006975032.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii
AltDE1]
gi|327549587|gb|AEA96305.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii str.
'Deep ecotype']
gi|410817060|gb|AFV83677.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas macleodii
AltDE1]
Length = 235
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFGSHGSTSHVNFRHFHSLSDA 63
V + N+ K HNV + R+ A G+ + V + F + GS V + ++DA
Sbjct: 22 VCLENVHKPHNVSAIVRTCDAVGIHRVHTVWEKKYQFRRGTAMGSQQWVRQTNHDGINDA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK + + ++D AVD + K TA L G E G + + + D + IP
Sbjct: 82 MAELKGQGMQVLVTHLSDTAVDFRDVDYTKPTAILFGQEKYGATDEAKALADQDIVIPMM 141
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 142 -GMVQSLNVSVAAALVLY 158
>gi|393765952|ref|ZP_10354511.1| RNA methyltransferase [Methylobacterium sp. GXF4]
gi|392728660|gb|EIZ85966.1| RNA methyltransferase [Methylobacterium sp. GXF4]
Length = 232
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 10 NIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSLSDAR 64
I HNVG + R+A AFGV+ ++ R A G + G HV F +L++A
Sbjct: 91 QITDPHNVGAIVRTAAAFGVAGIVTTVRHAPGATGVLAKSASGGLEHVPFVTVRNLAEAL 150
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ L + G++ +D + + +LG EG GL + CD IP +
Sbjct: 151 IELGERGYTRIGLD-SDAPASLDTLTIARPLVIVLGAEGKGLRERTRICCDILARIP-FS 208
Query: 125 GGTASLNVTVAASIVLHHFG 144
G SLNV+ AA+I L+ G
Sbjct: 209 GAIRSLNVSNAAAITLYALG 228
>gi|449120160|ref|ZP_21756546.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
H1-T]
gi|449122565|ref|ZP_21758898.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
MYR-T]
gi|448947555|gb|EMB28399.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
MYR-T]
gi|448948304|gb|EMB29141.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
H1-T]
Length = 258
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 72/144 (50%), Gaps = 10/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + +F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGSFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAV-DVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LK + I G + A+ D+T F K T ++G+EG G+S E CD V
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKALPDLT---FPKKTVLIMGSEGRGMSRLVEETCDEIVS 229
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G SLNV+VAA I+L+
Sbjct: 230 IPTK-GKLDSLNVSVAAGILLYEI 252
>gi|239907184|ref|YP_002953925.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio magneticus
RS-1]
gi|239797050|dbj|BAH76039.1| tRNA (guanosine-2'-O-)-methyltransferase [Desulfovibrio magneticus
RS-1]
Length = 196
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 80/173 (46%), Gaps = 15/173 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNF----RHFHSL 60
+V++NI HNV + RS AFG+ + +L F A G S S + RH +
Sbjct: 26 LVINNIHDPHNVSAILRSCDAFGIHRVHLLYTDTAFPALGKKSSGSAKKWVETVRHKDAA 85
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S A LK + + T+ AV + + TA +LGNE G+ D +YI
Sbjct: 86 SLAAA-LKGQGFRLVATSFTETAVPLQKWDLTTKTAIILGNEHSGVDEDLAPHVDGALYI 144
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERT---RDGNKYVVAERSARQVR 170
P G SLNV+VAA+++L+ GF + R G + AE AR V+
Sbjct: 145 PMM-GMVQSLNVSVAAAVILYE-----GFRQLEAAGRYGAPCIEAEEMARLVK 191
>gi|389866003|ref|YP_006368244.1| rRNA methylase [Modestobacter marinus]
gi|388488207|emb|CCH89778.1| rRNA methylase [Modestobacter marinus]
Length = 235
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH ++
Sbjct: 69 HVAIENFAHDLNIGTVVRTANAFLAAEVHVVGRRRWNRRGAMVTDRYQHLRHHPDVAALL 128
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +++ + V+ +AV + + + L G EG GLS + E V I Q+
Sbjct: 129 LAAAAEELVVVAVDNGPDAVPLETVRLPRRSLLLFGQEGPGLSPEAREGAALTVSIAQF- 187
Query: 125 GGTASLNVTVAASIVLHHF 143
G T SLN VAA I +H +
Sbjct: 188 GSTRSLNAGVAAGIAMHAW 206
>gi|421149296|ref|ZP_15608954.1| tRNA/rRNA methyltransferase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|394330213|gb|EJE56305.1| tRNA/rRNA methyltransferase [Staphylococcus aureus subsp. aureus
str. Newbould 305]
Length = 248
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 94 LSTVLILDGLEDPHNLGSILRTADATGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIR 153
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+L+ LK + G E ++A D S A ++G+EG G+S + CDF
Sbjct: 154 VTNLAKTIDELKDNGFWVAGTE-ANSATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDF 212
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++ IP G SLN +VAAS++++
Sbjct: 213 YIKIPMV-GHVNSLNASVAASLMMY 236
>gi|119963510|ref|YP_947871.1| TrmH family RNA methyltransferase [Arthrobacter aurescens TC1]
gi|403527336|ref|YP_006662223.1| tRNA/rRNA methyltransferase [Arthrobacter sp. Rue61a]
gi|119950369|gb|ABM09280.1| putative RNA methyltransferase, TrmH family [Arthrobacter aurescens
TC1]
gi|403229763|gb|AFR29185.1| putative tRNA/rRNA methyltransferase [Arthrobacter sp. Rue61a]
Length = 269
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHSL 60
V+ +I NVG + RSA A GV + +LV R + S G+ V + S
Sbjct: 123 VLEDIVDHTNVGAIFRSAAALGV-DAVLVSPRCGDPLYRRSVRVSMGTVFQVPWARLESW 181
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKK--STAFLLGNEGMGLSAKECEICDFFV 118
D LK + + +E+TDNAVD+ +K A +LG EG G+S + D V
Sbjct: 182 PDHLAQLKEQGFTVAAMELTDNAVDLDDLAARKIPKLALVLGTEGAGMSEETLAAVDLAV 241
Query: 119 YIPQYGGGTASLNVTVAASI 138
IP G SLNV A+++
Sbjct: 242 KIPMR-AGVDSLNVAAASAV 260
>gi|254302088|ref|ZP_04969446.1| rRNA methyltransferase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148322280|gb|EDK87530.1| rRNA methyltransferase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 234
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G + + ++ + + +LGNEG G+ K E CD V I
Sbjct: 151 SDTINKLKKLDYWVYGA-VGEANINYNEEDYPNKVVLVLGNEGSGIRKKVREHCDKLVKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|126695780|ref|YP_001090666.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9301]
gi|126542823|gb|ABO17065.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus str.
MIT 9301]
Length = 223
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLS 61
V+V ++ K HN+ + R+ A GV E + + + FN+ + GS V + +
Sbjct: 24 VLVEDVNKPHNLSAILRTCDAAGVFEANFISKTNAVKTFNS-TAQGSQKWVKLNNHENTI 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK+K + G + +VD + ++T F+LG E GLS + + D ++IP
Sbjct: 83 TAISDLKNKGFKLYGTTLNSESVDYRNFDYSQNTCFVLGAEKWGLSNELKSMVDQSIFIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAASI+L
Sbjct: 143 MR-GMVQSLNVSVAASILL 160
>gi|374298531|ref|YP_005050170.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio africanus str.
Walvis Bay]
gi|332551467|gb|EGJ48511.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio africanus str.
Walvis Bay]
Length = 196
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 5/140 (3%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V+ N+ HNV + RS AFGV + + F G S S + SDA
Sbjct: 26 LVIDNVHDPHNVSAILRSCDAFGVPSVHLYYTTSAFPVLGQKSSASARKWVMRTRHSDAT 85
Query: 65 VF---LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
LK ++ + ++ A +T TA +LGNE G S + ++ D +YIP
Sbjct: 86 SMYRGLKDQNFQVLATGFSERAKPLTAWDLSAPTAVILGNEHNGASPELAQVADGEIYIP 145
Query: 122 QYGGGTASLNVTVAASIVLH 141
G SLNV+VAA+I+L+
Sbjct: 146 MM-GMVQSLNVSVAAAIILY 164
>gi|289579164|ref|YP_003477791.1| TrmH family RNA methyltransferase [Thermoanaerobacter italicus Ab9]
gi|289528877|gb|ADD03229.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
italicus Ab9]
Length = 249
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + RSA AFGV +I+ RR S G+ ++ ++
Sbjct: 101 LILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEYMKIAKVSNI 160
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++ LK + I G ++ + + + A ++GNEG G+S + CDF V I
Sbjct: 161 NNTIRNLKERGLWIIGTDV-NGGKSFEEIDYDFPVALVIGNEGKGVSKLVLQNCDFVVKI 219
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G SLN +VAASI+++
Sbjct: 220 PM-KGKINSLNASVAASILIYQ 240
>gi|219849563|ref|YP_002463996.1| TrmH family RNA methyltransferase [Chloroflexus aggregans DSM 9485]
gi|219543822|gb|ACL25560.1| RNA methyltransferase, TrmH family, group 3 [Chloroflexus aggregans
DSM 9485]
Length = 252
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 15 HNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSLSDARVFLKS 69
N+GTL R+A A G +I+ GRR S G+ H+ +LS L+
Sbjct: 110 QNLGTLLRTAEAVGCHGIIIPGRRAAEITPAVVNASSGAVEHLRVAMVTNLSQTIEELQH 169
Query: 70 KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTAS 129
+ G+E + A D+ ++G EG G+S E CDF V +P G S
Sbjct: 170 NGIWVVGLEQDETAQDIDAVDLNLPLGLVIGAEGTGMSRLVRERCDFLVRLPIV-GQIGS 228
Query: 130 LNVTVAASIVLHH 142
LN VA SI ++H
Sbjct: 229 LNAAVAGSIAIYH 241
>gi|359419746|ref|ZP_09211694.1| putative RNA methyltransferase [Gordonia araii NBRC 100433]
gi|358244354|dbj|GAB09763.1| putative RNA methyltransferase [Gordonia araii NBRC 100433]
Length = 238
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF + + +VGRR +N G+ + + + H S++D
Sbjct: 90 HVAIENFNHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLEHHESVADLI 149
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T A + + + L G EG G+S D V I Q+
Sbjct: 150 AWARERGLAVVAVDNTPGAQRLERASLPRDCVLLFGQEGPGVSDDAQTQADLTVSIAQF- 208
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 209 GSTRSINAGVAAGIAMHAW 227
>gi|335427935|ref|ZP_08554855.1| 23S rRNA methyltransferase [Haloplasma contractile SSD-17B]
gi|334893861|gb|EGM32070.1| 23S rRNA methyltransferase [Haloplasma contractile SSD-17B]
Length = 242
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ + HN+G + R+A A GV +I+ R + A S G+ +V ++
Sbjct: 96 LILDGLEDPHNLGAIMRTADACGVHGIIIPKNRSVSLNATVAKLSSGAIEYVKVTKVTNI 155
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK K I G ++ D +V +K A ++GNEG G+S + CDF V +
Sbjct: 156 TRTIKELKKKGIWIAGTDL-DTSVTYKNSDYKLPLALVIGNEGKGISRLVKDNCDFLVKL 214
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERT 153
P G +SLN +VAA I+++ +S+R+
Sbjct: 215 PM-KGKISSLNASVAAGILMYEI-----YSQRS 241
>gi|227876391|ref|ZP_03994503.1| tRNA/rRNA methyltransferase [Mobiluncus mulieris ATCC 35243]
gi|227842932|gb|EEJ53129.1| tRNA/rRNA methyltransferase [Mobiluncus mulieris ATCC 35243]
Length = 197
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 3/136 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA-R 64
+ V NI N+G++ R+A GV ++ ++GRR FN G+ + +++ + FH + A
Sbjct: 52 IAVENIGHDFNIGSIIRTANGLGVRQVHILGRRRFNRRGAMVTDRYLHLQ-FHEVPAALA 110
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K I G++ A ++ + + G E G++ EI D + I QY
Sbjct: 111 TYAAEKALTIVGMDNLPGAENLESCELPRRCLMIFGEESSGITPATQEILDHLIQITQY- 169
Query: 125 GGTASLNVTVAASIVL 140
G T SLNV AA+I +
Sbjct: 170 GSTRSLNVGHAAAISM 185
>gi|78356529|ref|YP_387978.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio alaskensis
G20]
gi|78218934|gb|ABB38283.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio alaskensis
G20]
Length = 196
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 5/139 (3%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V+ NI HNV + RS AFGVS + + F S S + D
Sbjct: 26 LVLANIHDPHNVSAIYRSCDAFGVSRVHLYYTDTPFPPLSGRSSASARKWVETERHEDPA 85
Query: 65 VF---LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
L+ K C I + +A + + TA ++GNE G+ A+ EI D VYIP
Sbjct: 86 QLAAALRKKGCRILATSCSPSARPLREWDMTGPTAIIMGNEHRGVDAELMEIVDGEVYIP 145
Query: 122 QYGGGTASLNVTVAASIVL 140
+ G S NV+VAA+++L
Sbjct: 146 MF-GMIQSFNVSVAAAVIL 163
>gi|269975955|ref|ZP_06182959.1| tRNA/rRNA methyltransferase [Mobiluncus mulieris 28-1]
gi|306817283|ref|ZP_07451029.1| TrmH family RNA methyltransferase [Mobiluncus mulieris ATCC 35239]
gi|269935783|gb|EEZ92313.1| tRNA/rRNA methyltransferase [Mobiluncus mulieris 28-1]
gi|304649963|gb|EFM47242.1| TrmH family RNA methyltransferase [Mobiluncus mulieris ATCC 35239]
Length = 222
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA-R 64
+ V NI N+G++ R+A GV ++ ++GRR FN G+ + +++ + FH + A
Sbjct: 77 IAVENIGHDFNIGSIIRTANGLGVRQVHILGRRRFNRRGAMVTDRYLHLQ-FHEVPAALA 135
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K I G++ A ++ + + G E G++ EI D + I QY
Sbjct: 136 TYAAEKALTIVGMDNLPGAENLESCELPRRCLMIFGEESSGITPATQEILDRLIQIAQY- 194
Query: 125 GGTASLNVTVAASIVLHHF 143
G T SLNV AA+I + +
Sbjct: 195 GSTRSLNVGHAAAISMWAW 213
>gi|365924274|ref|ZP_09447037.1| tRNA/rRNA methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420265688|ref|ZP_14768222.1| TRNA/rRNA methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394427439|gb|EJF00138.1| TRNA/rRNA methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 249
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 103 FLILDGIEDPHNLGSIMRTADAAGVHGIIIPKRRAVQLTSTVAKTSTGAIEHVPVARVTN 162
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK ++ + G ++ N D + + A ++GNEG G+S + CD +
Sbjct: 163 LVQLVKELKKRNVWVFGTDM--NGTDFRKWNATGAVALVIGNEGKGISPLLKKECDEMLT 220
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GFS R
Sbjct: 221 IPMI-GHVQSLNASVAASLLIYQ-----GFSSR 247
>gi|330447150|ref|ZP_08310800.1| spoU rRNA Methylase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328491341|dbj|GAA05297.1| spoU rRNA Methylase family protein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 241
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSD 62
V + + K +NV + R+A A GV ++ V ++ SH G+ + V S+ +
Sbjct: 22 VCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPKEGMRVLSHTSAGARNWVELDTHDSMVE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++D A+D + + K TA +LG E G++A+ + D + IP
Sbjct: 82 AVQALKDQGMQVLATNLSDTAIDFREVDYTKPTAIILGGEKNGITAEALSMADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|449126198|ref|ZP_21762491.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
OTK]
gi|448938390|gb|EMB19321.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
OTK]
Length = 258
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAV-DVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LK + I G + A+ D+T F K T ++G+EG G+S E CD V
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKALSDLT---FPKKTVLIMGSEGRGMSRLVEETCDEIVS 229
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G SLNV+VAA I+L+
Sbjct: 230 IPTK-GKLDSLNVSVAAGILLYEI 252
>gi|163793894|ref|ZP_02187868.1| tRNA/rRNA methyltransferase (SpoU) [alpha proteobacterium BAL199]
gi|159181005|gb|EDP65522.1| tRNA/rRNA methyltransferase (SpoU) [alpha proteobacterium BAL199]
Length = 191
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 10 NIAKRHNVGTLARSATAFGVSEMILVGR-RDFNAFGSHGSTSHVNFRHFHSLSDARVFLK 68
I+K NV L R+A AFG S + +G R + +G ++ ++ D +
Sbjct: 11 EISKAMNVAALMRTAHAFGASFVFSIGSVRAGHEWGRVDTSDATGSLPYYPFDDPDAVMF 70
Query: 69 SKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTA 128
K C++ GVEITD AV + + A+++G E LS + CD V IP
Sbjct: 71 PKGCELVGVEITDEAVPLPSFHHPRRAAYVMGRERGALSPELLSRCDHVVRIPS----RF 126
Query: 129 SLNVTVAASIVLH 141
S+N+ +A ++V++
Sbjct: 127 SINLAIAGAMVMY 139
>gi|386354277|ref|YP_006052523.1| hypothetical protein SCATT_06300 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365804785|gb|AEW93001.1| hypothetical protein SCATT_06300 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 163
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 16 NVGTLARSATAFGVSEMILVG-RRDFNAFGSHGSTSHVNFRHFHSLSDARVFLKSKDCDI 74
NVG L R+A +G + + VG R A + + H HF L D L C +
Sbjct: 31 NVGMLWRAAALYGAAFVFTVGARYRHQATDTCKTPLHTPLLHFCDLEDLVEHLPHA-CQL 89
Query: 75 CGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASLNVTV 134
GVE+++NAV +T+ A+LLG E GL A + C + +P SLNV V
Sbjct: 90 VGVEMSENAVPLTRFVHPARAAYLLGAEDTGLPAPVLDRCHTLLTVPTM--LPISLNVAV 147
Query: 135 AASIVLH 141
A SI L+
Sbjct: 148 AGSITLY 154
>gi|449115791|ref|ZP_21752251.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
H-22]
gi|448955277|gb|EMB36044.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
H-22]
Length = 258
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAV-DVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LK + I G + A+ D+T F K T ++G+EG G+S E CD V
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKALPDLT---FPKKTVLIMGSEGRGMSRLVEETCDEIVS 229
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G SLNV+VAA I+L+
Sbjct: 230 IPTK-GKLDSLNVSVAAGILLYEI 252
>gi|381403358|ref|ZP_09928042.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. Sc1]
gi|380736557|gb|EIB97620.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. Sc1]
Length = 232
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R A S GS S V ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSQRMRTQASASAGSNSWVKVVTHPTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ +AVD + + T L+G E G++ + + D + IP
Sbjct: 82 AVKQLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQEKTGITEEALALADRQIVIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 142 V-GMVQSLNVSVACALILY 159
>gi|242372749|ref|ZP_04818323.1| RNA methyltransferase [Staphylococcus epidermidis M23864:W1]
gi|242349522|gb|EES41123.1| RNA methyltransferase [Staphylococcus epidermidis M23864:W1]
Length = 255
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 7/144 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 102 TVMILDGLEDPHNLGSILRTADASGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 161
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK + G +NA D S A ++G+EG G+S + CDF++
Sbjct: 162 NLSKTIDELKDNGFWVAGTA-ANNATDYRDLQADMSLAIVIGSEGQGMSRLVSDKCDFYI 220
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAAS++++
Sbjct: 221 KIPMV-GHVNSLNASVAASLMMYE 243
>gi|158422502|ref|YP_001523794.1| RNA methyltransferase [Azorhizobium caulinodans ORS 571]
gi|158329391|dbj|BAF86876.1| RNA methyltransferase [Azorhizobium caulinodans ORS 571]
Length = 281
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 7/140 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+V+ I HNVG + RSA AF V ++ R A G + G HV F +L
Sbjct: 133 LVLDQITDPHNVGAIVRSAAAFAVGAIVTTARHSPVATGVLAKSASGGLEHVPFCLVTNL 192
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ A LK+ + G++ ++ D+ + A +LG EG GL E CD I
Sbjct: 193 ARALEELKASGMLVVGLD-SEGPADLEDTAMRPPMALVLGAEGKGLRQLTRETCDVLARI 251
Query: 121 PQYGGGTASLNVTVAASIVL 140
G SLNV+ AA++ L
Sbjct: 252 -DLPGAIKSLNVSNAAALSL 270
>gi|307700467|ref|ZP_07637506.1| RNA methyltransferase, TrmH family [Mobiluncus mulieris FB024-16]
gi|307614452|gb|EFN93682.1| RNA methyltransferase, TrmH family [Mobiluncus mulieris FB024-16]
Length = 222
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA-R 64
+ V NI N+G++ R+A GV ++ ++GRR FN G+ + +++ + FH + A
Sbjct: 77 IAVENIGHDFNIGSIIRTANGLGVRQVHILGRRRFNRRGAMVTDRYLHLQ-FHEVPAALA 135
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K I G++ A ++ + + G E G++ EI D + I QY
Sbjct: 136 TYAAEKALTIVGMDNLPGAENLESCELPRRCLMIFGEESSGITPATQEILDRLIQITQY- 194
Query: 125 GGTASLNVTVAASIVLHHF 143
G T SLNV AA+I + +
Sbjct: 195 GSTRSLNVGHAAAISMWAW 213
>gi|20808679|ref|NP_623850.1| rRNA methylase [Thermoanaerobacter tengcongensis MB4]
gi|20517315|gb|AAM25454.1| rRNA methylase [Thermoanaerobacter tengcongensis MB4]
Length = 247
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAF---GSHGSTSHVNFRHFHSL 60
+++ I HN+G + RSA AFGV +I+ RR NA S G+ ++ ++
Sbjct: 99 LILDEITDPHNMGAIIRSAEAFGVHGVIIPKRRSAGINATVVKASAGAVEYIKVAKVSNI 158
Query: 61 SDARVFLKSKDCDICGVEI-TDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ LK K I G + + + + + F A ++G+EG G+S E CDF +
Sbjct: 159 NSTIRDLKEKGLWIIGTDAKAEKSFEELDYDF--PLALVIGSEGKGISRLVLENCDFVIK 216
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G SLN +VAASI++++
Sbjct: 217 IPMK-GKINSLNASVAASILMYNI 239
>gi|219685293|ref|ZP_03540112.1| tRNA/rRNA methyltransferase [Borrelia garinii Far04]
gi|219673066|gb|EED30086.1| tRNA/rRNA methyltransferase [Borrelia garinii Far04]
Length = 218
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + N R+ G+S++ ++ +R+ N + GS+ +N +++ A
Sbjct: 38 VLEDIFQPQNASATIRTGEILGLSDVHIISKRNKCTLNPDVTLGSSQWINLNRYNNTKFA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I + + ++++ P A G E GLSA+ E D ++ IP +
Sbjct: 98 LDRLKSDGYSIVATSLDEQSINLEDFPINNKMAVFFGTELTGLSAEAFEAADLYLKIPMH 157
Query: 124 GGGTASLNVTVAASIVLHHFGV 145
G T S N++VA +IV++ +
Sbjct: 158 -GFTQSYNISVAVAIVMYSLSI 178
>gi|410727957|ref|ZP_11366150.1| rRNA methylase, putative, group 3 [Clostridium sp. Maddingley
MBC34-26]
gi|410597517|gb|EKQ52128.1| rRNA methylase, putative, group 3 [Clostridium sp. Maddingley
MBC34-26]
Length = 281
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNA-----FGSHGSTSHVNFRHFHSL 60
V++ I HN+G++AR+A FGV +I+ RR + S G+ HV +L
Sbjct: 135 VILDEIEDPHNLGSIARTAELFGVHGIIIPRRRSASVSMTVYKSSAGAIEHVKIAKVTNL 194
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK + G +I Q F A ++GNEG G+S + CD + I
Sbjct: 195 NSTIDELKQMGIWVYGTDIRAEEYSY-QTDFSGPCAIIIGNEGKGISKLTVQKCDKLIKI 253
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G SLN +VA I+++
Sbjct: 254 PMV-GKINSLNASVAGGIIMYE 274
>gi|376263097|ref|YP_005149817.1| rRNA methylase [Clostridium sp. BNL1100]
gi|373947091|gb|AEY68012.1| rRNA methylase, putative, group 3 [Clostridium sp. BNL1100]
Length = 319
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I+ HN G + R+A A G +I+ RR + S G+ +V ++
Sbjct: 173 IILDEISDPHNFGAILRTANAVGAHGVIIPKRRAIGLTSAVSKASAGAVEYVPVSRVTNI 232
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S +LK + + G + T + K A ++G+EG G+ E CDF V I
Sbjct: 233 SQTIEYLKKNNVWVVGTDSTGEKA-FYESDLKGPMALVVGSEGEGMGKLVREKCDFVVNI 291
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G +SLN +VAA+IV++
Sbjct: 292 PMQ-GEISSLNASVAAAIVMYEI 313
>gi|418328554|ref|ZP_12939665.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis 14.1.R1.SE]
gi|418614166|ref|ZP_13177150.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU118]
gi|418631404|ref|ZP_13193868.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU128]
gi|418634299|ref|ZP_13196695.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU129]
gi|365231872|gb|EHM72889.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis 14.1.R1.SE]
gi|374821447|gb|EHR85508.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU118]
gi|374835505|gb|EHR99115.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU128]
gi|374837601|gb|EHS01165.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis VCU129]
Length = 255
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 102 TVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 161
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK I G E + NA D S ++G+EG G+S + CDF +
Sbjct: 162 NLSKTIDELKDSGFWIAGTEAS-NATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHI 220
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 221 KIPMV-GHVNSLNASVAASLMMY 242
>gi|416127887|ref|ZP_11597152.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus epidermidis FRI909]
gi|420178481|ref|ZP_14684812.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM057]
gi|420179580|ref|ZP_14685868.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM053]
gi|420191073|ref|ZP_14697009.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM037]
gi|420193488|ref|ZP_14699340.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM023]
gi|420200932|ref|ZP_14706570.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM031]
gi|420203531|ref|ZP_14709093.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM015]
gi|420233743|ref|ZP_14738322.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH051475]
gi|319399720|gb|EFV87969.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Staphylococcus epidermidis FRI909]
gi|394246416|gb|EJD91674.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM057]
gi|394253569|gb|EJD98574.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM053]
gi|394258031|gb|EJE02926.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM037]
gi|394259930|gb|EJE04758.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM023]
gi|394267413|gb|EJE12006.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM031]
gi|394274492|gb|EJE18908.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIHLM015]
gi|394304917|gb|EJE48308.1| RNA methyltransferase, TrmH family, group 3 [Staphylococcus
epidermidis NIH051475]
Length = 249
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFH 58
+ +++ + HN+G++ R+A A GV +I+ RR A S G+ HV
Sbjct: 96 TVIILDGLEDPHNLGSILRTADASGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVT 155
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LS LK I G E + NA D S ++G+EG G+S + CDF +
Sbjct: 156 NLSKTIDELKDSGFWIAGTEAS-NATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHI 214
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
IP G SLN +VAAS++++
Sbjct: 215 KIPMV-GHVNSLNASVAASLMMY 236
>gi|220903872|ref|YP_002479184.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868171|gb|ACL48506.1| tRNA guanosine-2'-O-methyltransferase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 250
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V+ NI HNV + RS AFGVS + + F A G S S + D+
Sbjct: 80 LVLANIHDPHNVSAIYRSCDAFGVSRVNLYYTNTPFPALGRKTSASARKWVESARHKDSA 139
Query: 65 VFLKS---KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
++S ++ + + A + F + TA ++GNE G+ + ++ D +YIP
Sbjct: 140 ALMESLRGQNMQVLATSCSPTARPLRDWDFTRPTAVIMGNEHSGVEPELLQMADGELYIP 199
Query: 122 QYGGGTASLNVTVAASIVL 140
Y G S NV+VAA+I+L
Sbjct: 200 MY-GMIQSFNVSVAAAIIL 217
>gi|405982748|ref|ZP_11041059.1| RNA methyltransferase, TrmH family, group 3 [Slackia piriformis YIT
12062]
gi|404389457|gb|EJZ84533.1| RNA methyltransferase, TrmH family, group 3 [Slackia piriformis YIT
12062]
Length = 253
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+V+ +I N+G +ARSA G S +I+ +R + S G+ +H+ ++
Sbjct: 103 MVLDHITDAGNLGAIARSAEIVGASGVIIPNKRSAHVTAATYKSSAGAINHIKCAQVSNI 162
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK++ + G + V + P A ++GNEG GLS E CDF +
Sbjct: 163 AQTLERLKTEGYWVAGAS-EEAHYTVWEAPLHGKIALVMGNEGEGLSRLTLESCDFLTRL 221
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
PQ G SLNV AA+ +++ +
Sbjct: 222 PQE-GKVGSLNVAQAATAIMYEW 243
>gi|385810854|ref|YP_005847250.1| rRNA methylase [Ignavibacterium album JCM 16511]
gi|383802902|gb|AFH49982.1| rRNA methylase [Ignavibacterium album JCM 16511]
Length = 180
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
YV++++I +NVG++ R++ + ++ L G + G+T VN+ +
Sbjct: 28 YVILNSIRSNYNVGSIFRTSDGAMIEKLYLCGYTPHPPKKEILKTALGATDSVNWEYVKD 87
Query: 60 LSDARVFLKSKDCDICGVEITDNA---VDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ LK K IC +E+T+N+ +++ + F A ++GNE G+S + + CDF
Sbjct: 88 PLNVIKELKVKGIKICALELTENSKPYFEISGNNF--PLALVVGNEISGVSQEILDHCDF 145
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQY G SLNV VA I ++
Sbjct: 146 SIEIPQY-GIKQSLNVAVAYGIAIYEM 171
>gi|453065735|gb|EMF06695.1| tRNA guanosine-2'-O-methyltransferase [Serratia marcescens VGH107]
Length = 231
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S V+ + ++ D
Sbjct: 22 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTTRMRTLVSSAAGSNSWVSVKTHRTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++ AVD + + + T LLG E G++ + + D + IP
Sbjct: 82 AVGHLKAQGMQILATNLSARAVDFREVDYTRPTCVLLGQEKTGITEEALALADQDIVIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|343506853|ref|ZP_08744315.1| tRNA guanosine-2'-O-methyltransferase [Vibrio ichthyoenteri ATCC
700023]
gi|342801201|gb|EGU36679.1| tRNA guanosine-2'-O-methyltransferase [Vibrio ichthyoenteri ATCC
700023]
Length = 227
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 3/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDARV 65
+ + K +NV + R+A A G+ ++ V S G+ + V S+ +A
Sbjct: 24 LEEVHKPNNVSAVIRTADATGIHKIHAVWPAKMRTLTHTSAGARNWVEVDTHSSIDEAIS 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LK++ I ++D+AVD + + K TA +LG+E +G SA+ E+ D + IP G
Sbjct: 84 ELKAQGMQILVTNLSDSAVDFREIDYTKPTAIILGSEKVGASARAKELADQDIIIPMM-G 142
Query: 126 GTASLNVTVAASIVLHH 142
SLNV+VA++++++
Sbjct: 143 MVQSLNVSVASAVIMYE 159
>gi|327405077|ref|YP_004345915.1| tRNA/rRNA methyltransferase SpoU [Fluviicola taffensis DSM 16823]
gi|327320585|gb|AEA45077.1| tRNA/rRNA methyltransferase (SpoU) [Fluviicola taffensis DSM 16823]
Length = 158
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGST-SHVNFRHFHSLSDARVF 66
++N HN+GTL RSA G + + VG+R T + + + H+ +L D
Sbjct: 14 IYNGKTDHNIGTLWRSAYILGAAYIFTVGKRYKKQTSDVTRTWARIPYFHYDTLEDLCNN 73
Query: 67 LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGG 126
+ DC + +E+T+ A + K +LLG+E GL E C + +P G
Sbjct: 74 I-PYDCCLTAIELTEGAEFLHDFEHPKRAIYLLGSEDQGLPDSVLEKCRKVIKLP----G 128
Query: 127 TASLNVTVAASIVLH 141
+SLNV V SIVLH
Sbjct: 129 NSSLNVAVTGSIVLH 143
>gi|449109481|ref|ZP_21746115.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ATCC 33520]
gi|448958724|gb|EMB39452.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
ATCC 33520]
Length = 258
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 10/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAV-DVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LK + I G + A+ D+T F K T ++G+EG G+S E CD V
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKALPDLT---FPKKTVLIMGSEGRGMSRLVEETCDEIVS 229
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G SLNV+VAA I+L+
Sbjct: 230 IPTK-GKLDSLNVSVAAGILLYEI 252
>gi|256833631|ref|YP_003162358.1| tRNA/rRNA methyltransferase SpoU [Jonesia denitrificans DSM 20603]
gi|256687162|gb|ACV10055.1| tRNA/rRNA methyltransferase (SpoU) [Jonesia denitrificans DSM
20603]
Length = 254
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 64/127 (50%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+G++ R+A AF V+E+ +VG+R +N G+ + + + RH
Sbjct: 107 HIAIENWHHDFNIGSVVRTANAFAVAEVHIVGKRRWNRRGAMVTDRYQHIRHHEDAQAFA 166
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + G++ D +V + F +++ + G E GL+ E+ V+I QY
Sbjct: 167 QWAQDNGLTVIGIDNIDGSVPIEGFAFPRASVLVFGQESTGLTQPMQEVSQSVVHITQY- 225
Query: 125 GGTASLN 131
G T S+N
Sbjct: 226 GSTRSMN 232
>gi|440758852|ref|ZP_20938008.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Pantoea agglomerans
299R]
gi|436427496|gb|ELP25177.1| tRNA (Guanosine18-2'-O-) -methyltransferase [Pantoea agglomerans
299R]
Length = 232
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R A S GS S V ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSQRMRTQASASAGSNSWVKVVTHPTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ +AVD + + T L+G E G++ + + D + IP
Sbjct: 82 AVKQLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQEKTGITEEALALADRQIVIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 142 V-GMVQSLNVSVACALILY 159
>gi|403070314|ref|ZP_10911646.1| rRNA methylase [Oceanobacillus sp. Ndiop]
Length = 245
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 10/145 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFH 58
++++ +I N+GT+ R+A A G+ + I++G + + + GS H+ H
Sbjct: 103 FLIIDSIQDPGNLGTIIRTADAAGM-DGIIIGEGTVDLYNDKVIRSTQGSLFHIPIYHAE 161
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+ V LK + + + NAV+ + A +LGNEG G+ + EI D V
Sbjct: 162 LKEEVEV-LKQEGFSVWATALL-NAVNYKEVSPNGKVAIILGNEGAGVQPELIEIADQSV 219
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
IP YG SLNV++AA I+++H
Sbjct: 220 TIPIYGRA-ESLNVSIAAGILMYHL 243
>gi|380300637|ref|ZP_09850330.1| rRNA methylase [Brachybacterium squillarum M-6-3]
Length = 218
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD 62
E +V + N+ N+G++ R+A AF V +VGRR +N G+ + + + H +
Sbjct: 66 ELHVAIENLEHDANIGSIVRTANAFAVGAFHIVGRRRWNRRGAMVTDRYQHEIHHPDAAA 125
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ + + + V++ + A+ + + ++G EG GLS + D V I Q
Sbjct: 126 LVAWAREQGRPLVAVDLVEGALPIEHVTLPRDAVLVMGQEGPGLSPELVAAADLVVGITQ 185
Query: 123 YGGGTASLNVTVAASIVLHHF 143
+ G T S+NV AA+I +H +
Sbjct: 186 F-GSTRSINVAAAAAIAMHTW 205
>gi|297562843|ref|YP_003681817.1| tRNA/rRNA methyltransferase SpoU [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847291|gb|ADH69311.1| tRNA/rRNA methyltransferase (SpoU) [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 250
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V V N N+G++ R+A AFG + + +VGRR +N G+ T H H ++A
Sbjct: 87 HVAVENWTHDFNIGSVVRTANAFGCAAVHIVGRRRWNKRGAM-VTDRYQHVHHHPDTEAL 145
Query: 65 V-FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
V + + + + GV+ +V + +P ++ + G EG GLS + +C + I Q+
Sbjct: 146 VAWAEERGLALLGVDNLPGSVPLETYPLPRNAVLVFGQEGPGLSEEVRRVCRAVLSISQF 205
Query: 124 GGGTASLN 131
G T S+N
Sbjct: 206 -GSTRSIN 212
>gi|427714401|ref|YP_007063025.1| rRNA methylase [Synechococcus sp. PCC 6312]
gi|427378530|gb|AFY62482.1| rRNA methylase [Synechococcus sp. PCC 6312]
Length = 265
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFN----AFGSHGSTSHVNFRHFHSL 60
+V+ I N+GTL R+A A GV + L G D S G + FR +L
Sbjct: 112 LVLEGIQDPGNLGTLIRTAAAAGVEGIYLGPGCVDLEHPKVLRASAGQWFRLGFRQSSNL 171
Query: 61 S-DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
S D + S D I + N+ + + + T FLLG+EG GLS + VY
Sbjct: 172 SQDLAPYQTSPDWQIIATRPSPNSCNYWDVNYGQPTIFLLGSEGQGLSPELLTQASQEVY 231
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IPQ G SLNV VAA+++L+
Sbjct: 232 IPQ-APGVESLNVGVAAALLLY 252
>gi|304399040|ref|ZP_07380909.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. aB]
gi|304353500|gb|EFM17878.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. aB]
Length = 221
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R A S GS S V ++ D
Sbjct: 11 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSQRMRTQASASAGSNSWVKVVTHPTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ +AVD + + T L+G E G++ + + D + IP
Sbjct: 71 AVKQLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQEKTGITEEALALADRQIVIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 131 V-GMVQSLNVSVACALILY 148
>gi|448244541|ref|YP_007408594.1| tRNA guanosine-2'-O-methyltransferase [Serratia marcescens WW4]
gi|445214905|gb|AGE20575.1| tRNA guanosine-2'-O-methyltransferase [Serratia marcescens WW4]
Length = 220
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ V R + GS S V+ + ++ D
Sbjct: 11 VCLEQVHKPHNVSAIIRTADAVGVHQVHAVWPTTRMRTLVSSAAGSNSWVSVKTHRTIGD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++ AVD + + + T LLG E G++ + + D + IP
Sbjct: 71 AVGHLKAQGMQILATNLSARAVDFREVDYTRPTCVLLGQEKTGITEEALALADQDIVIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|407474733|ref|YP_006789133.1| RNA methyltransferase, TrmH family group 3 [Clostridium acidurici
9a]
gi|407051241|gb|AFS79286.1| RNA methyltransferase, TrmH family group 3 [Clostridium acidurici
9a]
Length = 245
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + R+A + GV +I+ RR S G+ ++ ++
Sbjct: 100 LILDEIEDPHNLGAIMRTAESAGVHGIIIPKRRSVGLTAIVSKTSAGAIEYIPVAKVSNI 159
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S LK K+ I G + N + K A ++G+EG G+S E CDF + I
Sbjct: 160 SSTIEELKRKNIWIYGAHMEGNYY--YEQDLKGPIALVIGSEGKGISRLVKEKCDFLIKI 217
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G +SLN +VAASI+ +
Sbjct: 218 PMR-GKVSSLNASVAASIITYE 238
>gi|372277206|ref|ZP_09513242.1| tRNA guanosine-2'-O-methyltransferase [Pantoea sp. SL1_M5]
gi|390437320|ref|ZP_10225858.1| tRNA guanosine-2'-O-methyltransferase [Pantoea agglomerans IG1]
Length = 232
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ E+ V R A S GS S V ++ D
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGIHEVHAVWPSQRMRTQASASAGSNSWVKVVTHPTIGD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++ +AVD + + T L+G E G++ + + D + IP
Sbjct: 82 AVKKLKQQKMQVLATHLSADAVDFREIDYTLPTCILMGQEKTGITEEALALADRQIVIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 142 V-GMVQSLNVSVACALILY 159
>gi|311029029|ref|ZP_07707119.1| 23S rRNA methyltransferase [Bacillus sp. m3-13]
Length = 249
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +I+ RR A S G+ H+ +
Sbjct: 99 FLILDEIEDPHNLGSIMRTADAVGAHGIIIPKRRAVGLTATVAKSSTGAIEHIPVVRVTN 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + VD T+ ++G+EG G++ E CDF V
Sbjct: 159 LARTVDELKERGLWIFGTD-AKGTVDYTKMDGSLPLGLIIGSEGKGMARLLKEKCDFLVS 217
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAAS++++
Sbjct: 218 LPMVGKVT-SLNASVAASLLMYE 239
>gi|339624510|ref|ZP_08660299.1| tRNA/rRNA methyltransferase [Fructobacillus fructosus KCTC 3544]
Length = 250
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 9/146 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR G S G+ HV +
Sbjct: 102 FLILDEIEDPHNLGSIMRTADAAGVHGLIIPKRRSVQLTGTVAKASTGAIEHVPVCRVTN 161
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK + + G ++ N D K +TA ++GNEG G+S + D +
Sbjct: 162 LVQTVKTLKERGLWVFGTDM--NGQDYRTWDAKGATALIIGNEGKGISPLLKKQVDAMLT 219
Query: 120 IPQYGGGTASLNVTVAASIVLHH-FG 144
IP G SLN +VAAS++++ FG
Sbjct: 220 IPMI-GHVQSLNASVAASLLIYQAFG 244
>gi|429758141|ref|ZP_19290660.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 181
str. F0379]
gi|429173800|gb|EKY15309.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 181
str. F0379]
Length = 223
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
+ + N+ N+G++ RSA A GVS + +VGRR +N G+ + +++ H +++
Sbjct: 82 IAIENLGHDFNIGSIVRSANALGVSRVHIVGRRRWNRRGAMVTDRYLDVVHHSDVTEFAD 141
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
++ + + G++ ++ + H + G E GLS + C ++I Q G
Sbjct: 142 SVRERGLTLVGIDNVPGSIPLEGHQLPARACLIFGEESSGLSEEMRAQCGEILHITQR-G 200
Query: 126 GTASLNVTVAASIVL 140
T S+NV AA+I +
Sbjct: 201 STRSMNVGHAAAIAM 215
>gi|348507284|ref|XP_003441186.1| PREDICTED: probable methyltransferase TARBP1-like [Oreochromis
niloticus]
Length = 1621
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 36/178 (20%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLS-DAR 64
VV I K N+G L R+ FG S ++L S HVN ++F SLS A
Sbjct: 1462 VVASLIDKPTNLGGLCRTCEIFGASALVL------------DSLRHVNDKNFQSLSVSAE 1509
Query: 65 VFL-----------------KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLS 107
++L KS+ I GVE T N+ + ++ F + T LLGNE G+
Sbjct: 1510 LWLPLLEVKPMELTEFLQVKKSEGYCIVGVEQTANSHSLQEYQFPEKTLLLLGNEREGIP 1569
Query: 108 AKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERS 165
A ++ D V IPQ G SLNV V+A+++ +W + G+ V ++RS
Sbjct: 1570 ANLLQMLDVCVEIPQQ-GIIRSLNVHVSAALL-----IWEYTRQHLSSGSAEVDSKRS 1621
>gi|377832151|ref|ZP_09815115.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus mucosae LM1]
gi|377554158|gb|EHT15873.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus mucosae LM1]
Length = 248
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ +A HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 101 FLILDELADPHNLGSILRTADAAGVHGLIIPKRRSVGLTSVVAKTSTGAIEHVPVARVTN 160
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK + + G ++ D + K A ++GNEG G+S + CD +
Sbjct: 161 LVQTANELKERGLWLFGTDM--QGTDYRRWDAKGPVALVIGNEGKGISPLLKKTCDEMLT 218
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++ ++ GF+ R
Sbjct: 219 IPMI-GHVQSLNASVAASLL-----IYQGFNSR 245
>gi|326202357|ref|ZP_08192226.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
papyrosolvens DSM 2782]
gi|325987475|gb|EGD48302.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
papyrosolvens DSM 2782]
Length = 319
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I+ HN G + R+A A G +I+ RR + S G+ +V ++
Sbjct: 173 IILDEISDPHNFGAILRTANAVGAHGVIIPKRRAIGLTSTVSKASAGAVEYVPVSRVTNI 232
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S +LK + + G + T + K A ++G+EG G+ E CDF V I
Sbjct: 233 SQTIEYLKKNNVWVVGTDSTGEKA-FYESDLKGPMALVVGSEGEGMGKLVREKCDFVVNI 291
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G +SLN +VAA+IV++
Sbjct: 292 PMK-GEISSLNASVAAAIVMYEI 313
>gi|343511488|ref|ZP_08748648.1| tRNA guanosine-2'-O-methyltransferase [Vibrio scophthalmi LMG
19158]
gi|342797930|gb|EGU33565.1| tRNA guanosine-2'-O-methyltransferase [Vibrio scophthalmi LMG
19158]
Length = 227
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDARV 65
+ + K +NV + R+A A G+ ++ V S G+ + V S+ DA
Sbjct: 24 LEEVHKPNNVSAVIRTADATGIHKIHAVWPAKMRTLTHTSAGARNWVEVDTHSSIDDAIG 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LK++ I ++D AVD Q + K TA +LG+E +G SA+ + D + IP G
Sbjct: 84 ELKAQGMQILVTNLSDTAVDFRQIDYTKPTAIILGSEKVGASARAKALADQDIIIPMM-G 142
Query: 126 GTASLNVTVAASIVLHH 142
SLNV+VA++++++
Sbjct: 143 MVQSLNVSVASAVIMYE 159
>gi|83945697|ref|ZP_00958042.1| putative RNA methyltransferase, TrmH family protein [Oceanicaulis
sp. HTCC2633]
gi|83850898|gb|EAP88758.1| putative RNA methyltransferase, TrmH family protein [Oceanicaulis
alexandrii HTCC2633]
Length = 173
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR----RDFNAFGSHGSTSHVNFRHFHSLS 61
V V I+K N+G + R+A AFG S + VG R+ + +T ++ + + ++
Sbjct: 7 VGVEGISKARNLGAVMRTAHAFGGSFVFTVGAANRAREMFQTDTAKTTENLPYYDWETVD 66
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
D + + C I GVE+TD+AV++ + A++LG E LS + E C V IP
Sbjct: 67 DMAL---PRGCQIVGVELTDDAVELPSFRHPRMAAYVLGKERGDLSPEMLERCAHVVKIP 123
Query: 122 QYGGGTASLNVTVAASIVLHHFGV-WAGFSERT 153
+N++VAA+I L+ + G+ ER
Sbjct: 124 T----KFCVNLSVAAAIALYDRTLCLGGYPERP 152
>gi|299821035|ref|ZP_07052923.1| RNA methyltransferase [Listeria grayi DSM 20601]
gi|299816700|gb|EFI83936.1| RNA methyltransferase [Listeria grayi DSM 20601]
Length = 249
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A G +I+ RR A S G+ H+ +
Sbjct: 99 FILLDELEDPHNLGSIMRTADAVGAHGIIIPNRRSVGLTQTVAKASTGAIEHIPVVRVTN 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + ++ D ++G+EG G+S E CDF V+
Sbjct: 159 LNKTIDVLKDRGLWIFGTDAKGSS-DYRTMDVDMPLGIVIGSEGAGMSRLVREKCDFLVH 217
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAASI+L+
Sbjct: 218 LPMKGKVT-SLNASVAASILLYE 239
>gi|254472132|ref|ZP_05085532.1| RNA methyltransferase, TrmH family [Pseudovibrio sp. JE062]
gi|211958415|gb|EEA93615.1| RNA methyltransferase, TrmH family [Pseudovibrio sp. JE062]
Length = 186
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 16/139 (11%)
Query: 10 NIAKRHNVGTLARSATAFGVSEMILV-----GRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++K NVGTL R+ AFG S V G + S H+ + ++S+ + +
Sbjct: 11 GLSKSMNVGTLMRTGHAFGASYFFTVDAHIKGLGAAMKADTSKSPDHLPYFAWNSVDEMQ 70
Query: 65 VFLKSKDCDICGVEITDNAVDVTQ--HPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+ C + GVE+TD+A+++ HP + A++LG E LS + E CD+ V IP
Sbjct: 71 F---PRGCKLVGVELTDDAIELPSFGHPLQ--AAYILGPERGSLSKEMQERCDYIVKIPT 125
Query: 123 YGGGTASLNVTVAASIVLH 141
LNV VAA++VL+
Sbjct: 126 ----KFCLNVGVAAALVLY 140
>gi|422020171|ref|ZP_16366711.1| tRNA guanosine-2'-O-methyltransferase [Providencia alcalifaciens
Dmel2]
gi|414101766|gb|EKT63363.1| tRNA guanosine-2'-O-methyltransferase [Providencia alcalifaciens
Dmel2]
Length = 237
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDAR 64
+ I K HNV + RSA A G+ + V + + GS S V S +A
Sbjct: 24 LEEIHKPHNVSAIVRSADAVGIHNIHAVWPDQHVKLSVSSAAGSNSWVKVIPHQSTENAI 83
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+KS+ I ++D+AVD + + + T ++G E G+S K + D + IP
Sbjct: 84 SQIKSQGMQILVTNLSDSAVDFREIDYTQPTCIMVGQEKTGISDKALALADQHIIIPMV- 142
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 143 GMVQSLNVSVASALILY 159
>gi|386774016|ref|ZP_10096394.1| rRNA methylase, putative, group 3 [Brachybacterium
paraconglomeratum LC44]
Length = 320
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS-----HGSTSHVNFRHFHS 59
V + I N+G + RSA AFG +IL RR + S G+ V +
Sbjct: 168 LVALDGITDPRNLGAILRSADAFGAHGVILPERRSVSMTASVWKVAAGAAGRVRVAQVTN 227
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFK---KSTAFLLGNEGMGLSAKECEICDF 116
L+ LK +D + G+ D DVT + + TA ++G EG GLS E D
Sbjct: 228 LNRTLAALKEQDVFVLGL---DADGDVTSRELELGTQPTALVVGAEGKGLSRLARETSDQ 284
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
V IP G + SLN +VAA+I L+
Sbjct: 285 VVSIP-MAGRSESLNASVAAAIALYEI 310
>gi|54023445|ref|YP_117687.1| hypothetical protein nfa14780 [Nocardia farcinica IFM 10152]
gi|54014953|dbj|BAD56323.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 165
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Query: 16 NVGTLARSATAFGVSEMILVGRR-DFNAFGSHGSTSHVNFRHFHSLSDARVFLKSKDCDI 74
NVGTL RSA + + + VGRR A + + + + HF ++D L C +
Sbjct: 17 NVGTLWRSALTYEAAMLATVGRRYKPQAGDTTKAPNSIPLHHFEDVADLVDHLP-HGCPL 75
Query: 75 CGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASLNVTV 134
GVE+ A +T + +LLG E GL +C + IP SLNV+V
Sbjct: 76 IGVELDPRAESLTTFAHPRRALYLLGAEDHGLPEAVLTLCHQVIQIP--SPAPWSLNVSV 133
Query: 135 AASIVLH 141
A S+VLH
Sbjct: 134 AGSLVLH 140
>gi|357398242|ref|YP_004910167.1| hypothetical protein SCAT_0622 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337764651|emb|CCB73360.1| conserved protein of unknown function [Streptomyces cattleya NRRL
8057 = DSM 46488]
Length = 240
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 16 NVGTLARSATAFGVSEMILVGRR-DFNAFGSHGSTSHVNFRHFHSLSDARVFLKSKDCDI 74
NVG L R+A +G + + VG R A + + H HF L D L C +
Sbjct: 108 NVGMLWRAAALYGAAFVFTVGARYRHQATDTCKTPLHTPLLHFCDLEDLVEHLPHA-CQL 166
Query: 75 CGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASLNVTV 134
GVE+++NAV +T+ A+LLG E GL A + C + +P SLNV V
Sbjct: 167 VGVEMSENAVPLTRFVHPARAAYLLGAEDTGLPAPVLDRCHTLLTVPTM--LPISLNVAV 224
Query: 135 AASIVLH 141
A SI L+
Sbjct: 225 AGSITLY 231
>gi|320108702|ref|YP_004184292.1| TrmH family RNA methyltransferase [Terriglobus saanensis SP1PR4]
gi|319927223|gb|ADV84298.1| RNA methyltransferase, TrmH family, group 3 [Terriglobus saanensis
SP1PR4]
Length = 263
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++ + + HN+G L R+A GV ++L RR A S G+T HV +
Sbjct: 97 FLALDGVEDPHNLGALLRTADGAGVDGILLPERRSAPITAVVAKTSAGATEHVRIAKVTN 156
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFL-LGNEGMGLSAKECEICDFFV 118
L A +K + + G++ D T F + L LG+EG GL + CD+ +
Sbjct: 157 LVRALERMKKDNIWVIGLD-ERGTPDYTDFDFAPTDCVLVLGSEGAGLHDLVKKTCDYLL 215
Query: 119 YIPQYGGGTASLNVTVAASIVLHHFG 144
IP GG +SLNV+VA ++V++
Sbjct: 216 RIP-MAGGVSSLNVSVAGAVVMYEVA 240
>gi|212711590|ref|ZP_03319718.1| hypothetical protein PROVALCAL_02665 [Providencia alcalifaciens DSM
30120]
gi|212685692|gb|EEB45220.1| hypothetical protein PROVALCAL_02665 [Providencia alcalifaciens DSM
30120]
Length = 226
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDAR 64
+ I K HNV + RSA A G+ + V + + GS S V S +A
Sbjct: 13 LEEIHKPHNVSAIVRSADAVGIHNIHAVWPDQHVKLSVSSAAGSNSWVKVIPHQSTENAI 72
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+KS+ I ++D+AVD + + + T ++G E G+S K + D + IP
Sbjct: 73 SQIKSQGMQILVTNLSDSAVDFREIDYTQPTCIMVGQEKTGISDKALALADQHIIIPMV- 131
Query: 125 GGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 132 GMVQSLNVSVASALILY 148
>gi|126654404|ref|ZP_01726149.1| 23S rRNA methyltransferase [Bacillus sp. B14905]
gi|126589154|gb|EAZ83338.1| 23S rRNA methyltransferase [Bacillus sp. B14905]
Length = 250
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A G +I+ RR + A S G+ HV ++
Sbjct: 100 FLILDELEDPHNLGSIMRTADAIGAHGIIIPKRRSVSLTAVVAKASTGAIEHVPVVRVNN 159
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + +VD + A ++G+EG G+ E CDF +
Sbjct: 160 LAQTVDELKERGVWIAGTD-AKGSVDYRKMDATLPLAIIIGSEGKGMGRLLKEKCDFLYH 218
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAA+++++
Sbjct: 219 LPMVGHVT-SLNASVAAALLMYE 240
>gi|409197122|ref|ZP_11225785.1| tRNA/rRNA methyltransferase (spou) [Marinilabilia salmonicolor JCM
21150]
Length = 182
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 14/148 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
VV+ N+ HNVG++ R++ AF + + L G + H G+ V +++F
Sbjct: 27 VVLDNVRSLHNVGSIFRTSDAFRLEAVYLCG---ITSAPPHKEIHKTALGAEDSVKWQYF 83
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICD 115
+ ++A LKS + G+E + + + Q ++ A +LGNE G+ K ++CD
Sbjct: 84 NETTEAIEKLKSNGYLLLGIEQVEKSTPLEEFQTDTQQKYAVILGNEVKGVDQKVIDLCD 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ+ G S NV+V+A IVL
Sbjct: 144 KCLEIPQF-GTKHSFNVSVSAGIVLWEL 170
>gi|347754786|ref|YP_004862350.1| rRNA methylase [Candidatus Chloracidobacterium thermophilum B]
gi|347587304|gb|AEP11834.1| rRNA methylase, putative, group 3 [Candidatus Chloracidobacterium
thermophilum B]
Length = 249
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHSL 60
VV+ + HN+G + R+A G +I+ VG D S G+T ++ +L
Sbjct: 95 VVLDQVEDPHNLGAVIRTAECAGAHAVIIPEHHAVGLTDTVVKASAGATEYLPVVRVVNL 154
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ L+ +D I GVE D F TA +LG+EG G+ E CD V +
Sbjct: 155 ATTLDSLRQRDIWIVGVE-RDGERPYVGWDFTLPTAVVLGSEGKGIRRLVRERCDLVVSL 213
Query: 121 PQYGGGTASLNVTVAASIVLH 141
P G T SLNV+VAA +VL+
Sbjct: 214 PLLGNIT-SLNVSVAAGVVLY 233
>gi|300725268|ref|YP_003714597.1| tRNA /rRNA methyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297631814|emb|CBJ92535.1| putative tRNA/rRNA methyltransferase [Xenorhabdus nematophila ATCC
19061]
Length = 235
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 8/141 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG-----RRDFNAFGSHGSTSHVNFRHFHSL 60
+ + + K HNV + R+A A G+ ++ + R ++ GS S V + ++
Sbjct: 22 ICLEEVHKPHNVSAVIRTADAIGIHQIHAIWPDQSLRTQLSSAA--GSNSWVQVQTHSTI 79
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A KS + ++D AVD Q + K T ++G E G+S + + D + I
Sbjct: 80 QQAIEQFKSDGMQVLATHLSDKAVDFRQIDYTKPTCIIMGQEKKGISKQAVALADHDIII 139
Query: 121 PQYGGGTASLNVTVAASIVLH 141
P G SLNV+VA++++L+
Sbjct: 140 P-MAGMVQSLNVSVASALILY 159
>gi|256823639|ref|YP_003147602.1| tRNA guanosine-2'-O-methyltransferase [Kangiella koreensis DSM
16069]
gi|256797178|gb|ACV27834.1| tRNA guanosine-2'-O-methyltransferase [Kangiella koreensis DSM
16069]
Length = 231
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNF--RHFHS-LSD 62
V + + K HN+ + R+A A G+ + V D G H S+ + H HS L
Sbjct: 25 VFMDQVHKPHNLAAIVRTADAVGIGHVHAVFPEDVKFTGHHTSSGSKRWVTTHKHSNLKS 84
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
+K+K + +D AVD + + T L+G+E +G+S + EI D V IP
Sbjct: 85 GIAEMKAKGMQVLAAHFSDTAVDFRTIDYTQPTCLLVGSELVGVSDEAAEIADQHVIIPM 144
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA +++L+
Sbjct: 145 V-GMVQSLNVSVATALILY 162
>gi|359410052|ref|ZP_09202517.1| RNA methyltransferase, TrmH family, group 3 [Clostridium sp.
DL-VIII]
gi|357168936|gb|EHI97110.1| RNA methyltransferase, TrmH family, group 3 [Clostridium sp.
DL-VIII]
Length = 289
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
V++ + HN+G++ R+A FGV +I+ RR + S G+ HV +L
Sbjct: 143 VILDEVEDPHNLGSIVRTAELFGVHGIIIPKRRSASVSTTVYKSSVGAIEHVKIAKVTNL 202
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK K + G +I Q F A ++GNEG G+S + CD + I
Sbjct: 203 NSTIEELKQKGIWVYGADIRAKEYSY-QIDFSGPCAVIIGNEGRGISKLTVQKCDKLIKI 261
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLN +VA I+++
Sbjct: 262 PMV-GKINSLNASVAGGIIMYEV 283
>gi|251799664|ref|YP_003014395.1| TrmH family RNA methyltransferase [Paenibacillus sp. JDR-2]
gi|247547290|gb|ACT04309.1| RNA methyltransferase, TrmH family, group 3 [Paenibacillus sp.
JDR-2]
Length = 251
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+++ I HN+G++ R+A GV +I+ RR S G+ HV +
Sbjct: 103 LLILDEIEDPHNLGSILRTAECTGVHGVIIPKRRSVGLTATVLKTSAGAAEHVPVARVTN 162
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + + G +++ DV + F A ++GNEG G+ E CDF V
Sbjct: 163 LAQTIDRLKEEGVWVAGTDVSAPQ-DVYKTKFDLPLAIVIGNEGKGMGRLIKEKCDFLVK 221
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+P + G SLN +VAA ++++
Sbjct: 222 LPMH-GRLNSLNASVAAGVLMYEV 244
>gi|119477702|ref|ZP_01617852.1| tRNA (guanosine-2'-O-)-methyltransferase [marine gamma
proteobacterium HTCC2143]
gi|119449205|gb|EAW30445.1| tRNA (guanosine-2'-O-)-methyltransferase [marine gamma
proteobacterium HTCC2143]
Length = 239
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAF--GSHGSTSHVNFRHFHSLSD 62
V+ + K N+ + R+A A G+ + +VG +D+ +F + GS +V + L+
Sbjct: 22 VLTDYVHKGRNLSAIVRTADAVGIGSVHCVVGDKDYRSFRGTALGSHRYVEVHRYTELNQ 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
LKS+ + ++ AVD + + T L+G E GLSA E D + +P
Sbjct: 82 PVTALKSRGFQVVAAHVSATAVDYHEVDYTAPTVLLMGAEKNGLSADGLEAADIHITVPM 141
Query: 123 YGGGTASLNVTVAASIVLH---HFGVWAGFSERTR 154
G S NV+VAA I+L+ H AG +R R
Sbjct: 142 V-GMVESFNVSVAAGIILNEARHQRQIAGCYDRQR 175
>gi|284008963|emb|CBA75850.1| tRNA (guanosine-2'-O-)-methyltransferase [Arsenophonus nasoniae]
Length = 225
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN---AFGSHGSTSHVNFRHFHSLSD 62
V + N+ K HN+ + R+A A G+S++ + ++ + + GS V + ++
Sbjct: 8 VCLENVHKPHNISAVIRTADAVGISQIHAIWCQNSTKSLSAAAAGSNHWVKVKTHATIEK 67
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A K+ I +T A+D Q + + T +LG E G+S + + D ++IP
Sbjct: 68 AISTCKAAGMQILAAHLTKQAIDFRQIDYTQPTCIILGQERTGISKQALALADHNIHIPM 127
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 128 M-GMVQSLNVSVASALILY 145
>gi|149908558|ref|ZP_01897220.1| tRNA (guanosine-2'-O-)-methyltransferase [Moritella sp. PE36]
gi|149808392|gb|EDM68329.1| tRNA (guanosine-2'-O-)-methyltransferase [Moritella sp. PE36]
Length = 228
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 25/218 (11%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHS---LSD 62
V + ++ K HN+ + R+ A GV+ + V +T N+ HS ++
Sbjct: 22 VCMESVHKPHNLAAVVRTCDAVGVNNVHAVWSIRPTKVSGGTATGSQNWVKVHSHDNIAA 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++D AVD + K TA L+G E G+SA+ + D + IP
Sbjct: 82 AIKELKAQGMQVLATNLSDTAVDFRDIDYTKPTAILMGQEKTGISAEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESI- 181
G SLNV+VA + +L+ ++R RD E AE+ I
Sbjct: 142 V-GMVQSLNVSVATATILYE-------AQRQRDNAGMYQGE-------SKLSAEEQHKIF 186
Query: 182 ------IEMRRSRRENASNGFFDGSGNDVSSSSLLDAL 213
+ + +R+ + D G V+ S DAL
Sbjct: 187 FEGGHPVYAKACKRKGLAYPELDAEGQIVADESWWDAL 224
>gi|145219563|ref|YP_001130272.1| tRNA/rRNA methyltransferase SpoU [Chlorobium phaeovibrioides DSM
265]
gi|145205727|gb|ABP36770.1| tRNA/rRNA methyltransferase (SpoU) [Chlorobium phaeovibrioides DSM
265]
Length = 178
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+++HNI NVG++ RSA A G+ ++IL G R++ + G+ + + + + +
Sbjct: 28 LMLHNIRSMWNVGSMFRSADAAGIEKIILSGYTATPPRKEITK-TALGADASMPWEYTDN 86
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKK-STAFLLGNEGMGLSAKECEICDFFV 118
LK ICG+EI + + T+ + L+GNE G+ CD +
Sbjct: 87 PQQTLRDLKKSGVRICGLEIAEGSRLYTEMKAQDFPVCLLVGNEVQGIEDNLLAQCDLVL 146
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
IPQ+ G SLNV+VAA +VL
Sbjct: 147 EIPQF-GIKHSLNVSVAAGVVLFEL 170
>gi|427427633|ref|ZP_18917677.1| putative RNA methyltransferase, TrmH family [Caenispirillum
salinarum AK4]
gi|425883559|gb|EKV32235.1| putative RNA methyltransferase, TrmH family [Caenispirillum
salinarum AK4]
Length = 203
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVG----RRDFNAFGSHGSTSHVNFRHFHSLSDA 63
V I K NVG L RSA AF S + V RR + + + + + F S D
Sbjct: 9 VERIHKPFNVGNLFRSAHAFDASFVFTVDAQYERRKLHRVDTSDALGALPYYEFDSADD- 67
Query: 64 RVFLKSKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+ + C + GVE+TD+A+ + +HP + A++LG E LS E CDF V IP
Sbjct: 68 --MMLPRTCRLVGVELTDDAIALPSFRHPIQ--AAYILGPEAGSLSPGMQERCDFIVKIP 123
Query: 122 QYGGGTASLNVTVAASIVLH 141
LNV +A +V++
Sbjct: 124 S----KFCLNVGIAGVLVMY 139
>gi|317494702|ref|ZP_07953114.1| SpoU rRNA methylase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917304|gb|EFV38651.1| SpoU rRNA methylase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 230
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ + G+ + GS S V+ + +S
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKTMRTMVSTAAGSNSWVSVKTHPDISS 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++ AVD + + + T L+G E G++A+ + D + IP
Sbjct: 82 AVSTLKAEGMQILATNLSSTAVDFREIDYTRPTCILMGQEKYGITAEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 I-GMVQSLNVSVASALILY 159
>gi|254507286|ref|ZP_05119422.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus 16]
gi|219549746|gb|EED26735.1| tRNA guanosine-2'-O-methyltransferase [Vibrio parahaemolyticus 16]
Length = 227
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDARV 65
+ + K +NV + R+A A GV ++ V + S G+ + V+ S+ DA
Sbjct: 24 LEEVHKPNNVSAVIRTADATGVHKVHAVWPNEMRTLSHTSAGARNWVDVETHDSIEDAIN 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LKS+ + +++ AVD + + K TA +LG+E G S + ++ D + IP G
Sbjct: 84 ELKSQGMQVLVTNLSETAVDFREIDYTKPTAIILGSEKTGASEQAKQLADQDIIIPMI-G 142
Query: 126 GTASLNVTVAASIVLH 141
SLNV+VA++++L+
Sbjct: 143 MVQSLNVSVASAVILY 158
>gi|422006605|ref|ZP_16353594.1| tRNA guanosine-2'-O-methyltransferase [Providencia rettgeri Dmel1]
gi|414098821|gb|EKT60466.1| tRNA guanosine-2'-O-methyltransferase [Providencia rettgeri Dmel1]
Length = 237
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG---RRDFNAFGSHGSTSHVNFRHFHSLSD 62
+ + I K HNV + RSA A G+ ++ + + + + GS S V S +
Sbjct: 22 LCLEEIHKPHNVSAIVRSADAVGIHQIHAIWPDQQVKLSVSSAAGSNSWVKIISHTSTEE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +KS++ + ++++AVD + + T ++G E G+S + + D + IP
Sbjct: 82 AISQIKSQNMQVLATNLSEHAVDFREIDYTLPTCIMMGQEKTGISQQALALADKHIIIP- 140
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MAGMVQSLNVSVASALILY 159
>gi|298345662|ref|YP_003718349.1| tRNA/rRNA methyltransferase [Mobiluncus curtisii ATCC 43063]
gi|298235723|gb|ADI66855.1| tRNA/rRNA methyltransferase [Mobiluncus curtisii ATCC 43063]
Length = 198
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V + N+ N G++ R+A GV + +VGRR FN G+ + +++ H + D
Sbjct: 51 VAIENVGHDFNTGSIIRTANGLGVRHVHIVGRRRFNRRGAMVTDRYLHLHHHPEVQDLVS 110
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ ++ I G++ A + T + G E GL+ + V I QY G
Sbjct: 111 YAAQQELTIVGMDNFPGAEPLETVTLPSRTLMVFGEESQGLTPAMQNALERLVQITQY-G 169
Query: 126 GTASLNVTVAASIVLHHFGVWA 147
T SLNV AA+I +WA
Sbjct: 170 STRSLNVGHAAAI-----SIWA 186
>gi|193213878|ref|YP_001995077.1| tRNA/rRNA methyltransferase SpoU [Chloroherpeton thalassium ATCC
35110]
gi|193087355|gb|ACF12630.1| tRNA/rRNA methyltransferase (SpoU) [Chloroherpeton thalassium ATCC
35110]
Length = 179
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFH 58
YV+ NI NVG++ R+ A + ++I+ G R + + G+T V++ +
Sbjct: 27 YVMFQNIRSMWNVGSIFRTCDAARIQKVIITGYTATPPRPQIDKV-ALGATETVDWEYVA 85
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKK-STAFLLGNEGMGLSAKECEICDFF 117
+A LK + I +EIT+NA + + + +LGNE G+ + + CDF
Sbjct: 86 DPLEALADLKDQGVKIAALEITENARNYDELSAEDFPLCLVLGNEVTGIDDEVLQECDFA 145
Query: 118 VYIPQYGGGTASLNVTVAASIVL 140
+ IPQY G SLNV V+A I +
Sbjct: 146 LEIPQY-GTKHSLNVAVSAGIAI 167
>gi|433624907|ref|YP_007258537.1| tRNA/rRNA methylase [Mycoplasma cynos C142]
gi|429534933|emb|CCP24435.1| tRNA/rRNA methylase [Mycoplasma cynos C142]
Length = 243
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 11 IAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFG---SHGSTSHVNFRHFHSLSDARV 65
I HN+G + R+ A G+ ++IL D N+ S G ++NF +SLS +
Sbjct: 98 IQDPHNLGAIIRTTNAAGIKDIILSKEHSADINSTVLKISSGGFVNMNFYKVNSLSASLT 157
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LK + + +NAV T + + ++GNEG G+S + D VYI Q G
Sbjct: 158 KLKKSGYWVYATALNENAVPHTNVNYNLPSIIVVGNEGEGVSKSVLSVSDVNVYINQ-KG 216
Query: 126 GTASLNVTVAASIVLHHF 143
SLNV+VA I+L F
Sbjct: 217 TVQSLNVSVATGIILFDF 234
>gi|116621924|ref|YP_824080.1| RNA methyltransferase [Candidatus Solibacter usitatus Ellin6076]
gi|116225086|gb|ABJ83795.1| RNA methyltransferase, TrmH family, group 3 [Candidatus Solibacter
usitatus Ellin6076]
Length = 237
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHF 57
E VV+ + HN+G + R+A A G +I+ RR D A + G+ H+
Sbjct: 87 EMLVVLDGVEDPHNLGAIVRTAHAAGAGAVIVPERRAAGVTDVVAKAAAGALEHLPVVRV 146
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+++ A LK + I G++ Q + K + +LG EG GL + + CD
Sbjct: 147 TNINRALEDLKERGMWIYGLD-ERGTESYDQIDYAKKSVLVLGGEGKGLHEQVRKHCDVL 205
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
V IP G +SLNV+VAA +VL +
Sbjct: 206 VRIP-MAGQISSLNVSVAAGVVLFEW 230
>gi|227505888|ref|ZP_03935937.1| RNA methyltransferase [Corynebacterium striatum ATCC 6940]
gi|227197516|gb|EEI77564.1| RNA methyltransferase [Corynebacterium striatum ATCC 6940]
Length = 229
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + H ++++
Sbjct: 81 HIAIENFENDSNIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLMHHATVAELL 140
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ K + ++ T V + + L G EG G++ + + I Q+
Sbjct: 141 EWASDKGLTVVAIDNTPGCVPLETAELPERCLLLFGQEGPGVTQEAQDAAMMTCSIAQF- 199
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 200 GSTRSINAGVAAGIAMHAW 218
>gi|197286694|ref|YP_002152566.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis HI4320]
gi|227355114|ref|ZP_03839525.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis ATCC
29906]
gi|425069568|ref|ZP_18472683.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW6]
gi|425071027|ref|ZP_18474133.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW4]
gi|194684181|emb|CAR45642.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis HI4320]
gi|227164901|gb|EEI49748.1| tRNA (guanosine-2'-O-)-methyltransferase [Proteus mirabilis ATCC
29906]
gi|404596994|gb|EKA97501.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW6]
gi|404599852|gb|EKB00305.1| tRNA guanosine-2'-O-methyltransferase [Proteus mirabilis WGLW4]
Length = 239
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A G+ ++ + + + GS S VN +++D
Sbjct: 22 VCLEEVHKSHNVAAVIRTADAVGIPKIHAIWPEEKMRMLVSPAAGSNSWVNVNTHPTIAD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +++ + ++D AVD + + + T ++G E G+S + + D + +P
Sbjct: 82 AINTFRAQGMQVLATHLSDKAVDFREIDYTQPTCIIMGQEKTGISPEAIALADQDIIVPM 141
Query: 123 YGGGTASLNVTVAASIVLHH 142
G SLNV+VA++++L+
Sbjct: 142 M-GMVQSLNVSVASALILYE 160
>gi|451817041|ref|YP_007453242.1| RNA methyltransferase, TrmH family group 3 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783020|gb|AGF53988.1| RNA methyltransferase, TrmH family group 3 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 292
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNA-----FGSHGSTSHVNFRHFHSL 60
V++ I HN+G++ R+A FGV +I+ RR + S G+ HV ++
Sbjct: 146 VILDEIEDPHNLGSIVRTAELFGVHGIIIPKRRSASVSTTVYKSSVGAIEHVKIAKVTNI 205
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK K + G +I + Q F A ++GNEG G+S + CD + I
Sbjct: 206 NTVIEELKEKGIWVYGADIRADEYSY-QVDFSGPCAVIIGNEGRGISKLTVQKCDKLIKI 264
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G SLN +VA I+++
Sbjct: 265 PMV-GKINSLNASVAGGIIMYE 285
>gi|365836918|ref|ZP_09378302.1| RNA methyltransferase, TrmH family [Hafnia alvei ATCC 51873]
gi|364563115|gb|EHM40935.1| RNA methyltransferase, TrmH family [Hafnia alvei ATCC 51873]
Length = 219
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSH-GSTSHVNFRHFHSLSD 62
V + + K HNV + R+A A GV ++ + G+ + GS S V+ + +S
Sbjct: 11 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKTMRTMVSTAAGSNSWVSVKTHPDISS 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++ AVD + + + T L+G E G++A+ + D + IP
Sbjct: 71 AVSTLKAEGMQILATNLSSTAVDFREIDYTRPTCILMGQEKYGITAEALALADQDIIIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 131 I-GMVQSLNVSVASALILY 148
>gi|304392671|ref|ZP_07374611.1| 23S rRNA methyltransferase [Ahrensia sp. R2A130]
gi|303295301|gb|EFL89661.1| 23S rRNA methyltransferase [Ahrensia sp. R2A130]
Length = 210
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 11 IAKRHNVGTLARSATAFGVSEMI-LVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLKS 69
I+K N G LAR+A FG S + L + N + + SH + +++ S
Sbjct: 14 ISKPMNFGNLARTAHGFGASFVFTLAPGKRINHAPADTTNSH-DHMPWYTYSGIDTMQLP 72
Query: 70 KDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
DC + GVE+TD+A+ + +HP + A+LLG E LS E C+F + IP
Sbjct: 73 DDCRLVGVELTDDAIALPSFRHPLR--AAYLLGPENGSLSPDAMEKCEFIIKIPT----A 126
Query: 128 ASLNVTVAASIVLH 141
LNV A +++++
Sbjct: 127 FCLNVATAGAVIMY 140
>gi|46200169|ref|YP_005836.1| tRNA (guanosine-2'-O-)-methyltransferase [Thermus thermophilus
HB27]
gi|55980096|ref|YP_143393.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus thermophilus HB8]
gi|48425869|pdb|1V2X|A Chain A, Trmh
gi|11079208|dbj|BAB17605.1| tRNA (Gm18) methyltransferase [Thermus thermophilus HB8]
gi|46197797|gb|AAS82209.1| tRNA (Guanosine-2'-O-)-methyltransferase [Thermus thermophilus
HB27]
gi|55771509|dbj|BAD69950.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus thermophilus HB8]
Length = 194
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V++ N+ K HN+ + R+ A GV E V G FN S GS V R L
Sbjct: 25 VLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNE-TSGGSHKWVYLRVHPDLH 83
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+A FLK + + + ++A D + + K TA L G E G+S + + D + IP
Sbjct: 84 EAFRFLKERGFTVYATALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIP 143
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 144 ML-GMVQSLNVSVAAAVIL 161
>gi|228472059|ref|ZP_04056827.1| SpoU rRNA methylase family protein [Capnocytophaga gingivalis ATCC
33624]
gi|228276671|gb|EEK15384.1| SpoU rRNA methylase family protein [Capnocytophaga gingivalis ATCC
33624]
Length = 178
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVN 53
I VV+ NI +N+G++ R+A AF + ++ L G A H G+T V
Sbjct: 23 IPVIVVLDNIRSLNNIGSVFRTADAFCIQKIYLCG---ITATPPHKEIHKTALGATESVE 79
Query: 54 FRHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKK--STAFLLGNEGMGLSAKEC 111
+ + ++ L+ + ++ +E ++AV + KK + A + GNE G+
Sbjct: 80 WEYVQDITTLVESLRQRQVEVIAIEQVEDAVSLEHFSPKKGVTYALIFGNEVEGVQQSVV 139
Query: 112 EICDFFVYIPQYGGGTASLNVTVAASIVLHHF 143
+C + IPQY G SLN+ V+A I+L F
Sbjct: 140 SLCQRAIEIPQY-GTKHSLNIAVSAGILLWDF 170
>gi|404421105|ref|ZP_11002831.1| spou rRNA methylase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403659374|gb|EJZ14025.1| spou rRNA methylase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 217
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+G + R+A AF V + +VG+R +N G+ + + RH + ++
Sbjct: 69 HIAIENFGNDANIGAVVRTANAFAVDTVHIVGKRRWNRRGAMVTDRYQRLRHHDTTAELL 128
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ AV + Q + + G EG G++ + V I Q+
Sbjct: 129 SFAADAGLTVVAVDNVPGAVRLEQTELPRHCLLIFGQEGPGITPEAQAGAAVTVSIAQF- 187
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 188 GSTRSINAGVAAGIAMHAW 206
>gi|381189778|ref|ZP_09897303.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus sp. RL]
gi|380452355|gb|EIA39954.1| tRNA (guanosine-2'-O-) methyltransferase [Thermus sp. RL]
Length = 194
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V++ N+ K HN+ + R+ A GV E V G FN S GS V R +
Sbjct: 25 VLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNE-TSGGSHKWVYLRVHPDIR 83
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+A L+++D + + ++A D + + K T LLG E G+S + + D + IP
Sbjct: 84 EAFRHLRARDFRVYATALREDAQDFREVDYTKPTCVLLGAEKWGVSEEALALADGAIKIP 143
Query: 122 QYGGGTASLNVTVAASIVL---HHFGVWAGFSERTR 154
G SLNV+VAA+++L H + AG R R
Sbjct: 144 ML-GMVQSLNVSVAAAVILFEAHXHRLKAGLYXRPR 178
>gi|320449724|ref|YP_004201820.1| tRNA guanosine-2'-O-methyltransferase [Thermus scotoductus SA-01]
gi|320149893|gb|ADW21271.1| tRNA guanosine-2'-O-methyltransferase [Thermus scotoductus SA-01]
Length = 191
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V++ N+ K HN+ + R+ A G+ E V G FN S GS V R S+
Sbjct: 22 VLLENVHKPHNLSAILRTCDAVGILEAHAVNPTGGVPTFNE-TSGGSHKWVYLRVHPSIQ 80
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+A FLK K + + ++A D + + + TA LLG E G+S + + + IP
Sbjct: 81 EAISFLKEKGFRVYATALREDARDFREVDYTQPTAILLGAEKWGVSEETLALSHGAIKIP 140
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 141 ML-GMVQSLNVSVAAAVIL 158
>gi|269103907|ref|ZP_06156604.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163805|gb|EEZ42301.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 236
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSD 62
V + + K +NV + R+A A GV ++ V + + SH GS + V +++D
Sbjct: 22 VCLEQVHKPNNVSAIIRTADAVGVHKVHAVWQAEQLRLHSHTSAGSRNWVELETHANITD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +K++ + +++ AVD + + K TA +LG E G++ + + D + IP
Sbjct: 82 AVHAMKAQGMQVLATNLSERAVDFREIDYTKPTAIILGGEKHGITPEALALADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|451966263|ref|ZP_21919517.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Edwardsiella tarda
NBRC 105688]
gi|451315042|dbj|GAC64879.1| tRNA (guanosine(18)-2'-O)-methyltransferase [Edwardsiella tarda
NBRC 105688]
Length = 230
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGR--RDFNAFGSHGSTSHVNFRHFHSLS 61
V + + K HNV + R+A A GV ++ + G+ R + + GS S V+ + ++
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKSMRTLVSTAA-GSNSWVSVKTHRDIA 80
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK + I ++ AVD + + + T L+G E G+SA+ ++ D + IP
Sbjct: 81 SAVSELKGQGMQILATNLSATAVDFREIDYTRPTCILMGQEKRGISAEALQLADRDIIIP 140
Query: 122 QYGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MV-GMVQSLNVSVASALILY 159
>gi|310777971|ref|YP_003966304.1| TrmH family RNA methyltransferase [Ilyobacter polytropus DSM 2926]
gi|309747294|gb|ADO81956.1| RNA methyltransferase, TrmH family, group 3 [Ilyobacter polytropus
DSM 2926]
Length = 236
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+V+ + N G + RSA FGV +I+ R S G+ HV+ ++
Sbjct: 91 LVLDGVQDPRNFGAIVRSAEIFGVKGIIIPERNSVKINETVVKTSTGAIEHVDIIKVTNI 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S+A LK D + G E + + TA ++G EG G+ K E CD V I
Sbjct: 151 SEAIQKLKKLDYWVYGAEGSGKKC-YYDEKYPNRTALVMGGEGSGIRKKVKENCDILVNI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA I+L
Sbjct: 210 PMY-GKINSLNVSVAGGILLSEI 231
>gi|288554706|ref|YP_003426641.1| tRNA/rRNA methyltransferase [Bacillus pseudofirmus OF4]
gi|288545866|gb|ADC49749.1| tRNA/rRNA methyltransferase [Bacillus pseudofirmus OF4]
Length = 249
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +I+ RR A S G+ ++ +
Sbjct: 98 FLILDEIEDPHNLGSIMRTADAAGAHGIIIPKRRAVGLTQTVAKASTGAIEYIPVVRVTN 157
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
++ LK + G + +A D Q F ++G+EG G+S E CDF +
Sbjct: 158 IARTMDDLKKRGLWFAGTDAKGSA-DYRQASFDMPIGLVIGSEGKGISRLIKEKCDFLIQ 216
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNK 158
IP G T SLN +VAAS++++ + R GNK
Sbjct: 217 IPMVGQVT-SLNASVAASLLMYEV-----YRRRHPLGNK 249
>gi|406884257|gb|EKD31700.1| hypothetical protein ACD_77C00272G0013 [uncultured bacterium]
Length = 178
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
+V+ NI +HN+G RSA AF + L G + G+ + + +F
Sbjct: 28 IVLDNIRSQHNIGAAFRSADAFCAQCLFLCGICSVPPTPEIHKSALGAEESMEWHYFEKT 87
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEICDFFV 118
DA + LK++ I VE T+N+ + + K+ AF+ GNE G++ + +I D V
Sbjct: 88 EDAILKLKNEGYKILSVEQTENSTMLNKLVLSKNEKYAFVFGNEVKGVAQEIADISDLVV 147
Query: 119 YIPQYGGGTASLNVTVAASIVL 140
IPQ G S+NV+V+ IVL
Sbjct: 148 EIPQ-SGTKHSINVSVSIGIVL 168
>gi|300024766|ref|YP_003757377.1| tRNA/rRNA methyltransferase SpoU [Hyphomicrobium denitrificans ATCC
51888]
gi|299526587|gb|ADJ25056.1| tRNA/rRNA methyltransferase (SpoU) [Hyphomicrobium denitrificans
ATCC 51888]
Length = 168
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 11 IAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTS----HVNFRHFHSLSDARVF 66
++K N+G L RSA AFG S VG + A +H TS H+ ++ +L D +
Sbjct: 23 MSKSLNLGNLMRSAHAFGASFTFTVGA-TYKAVEAHADTSKSQLHLPHYNWATLDDMAL- 80
Query: 67 LKSKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
C + G+E+ D A+D+ +HP + A++LG E LS E CD+ + IP
Sbjct: 81 --PGGCKLVGIELLDGAIDLPSFRHPLR--AAYVLGPELGSLSEPLVERCDYVIKIPT-- 134
Query: 125 GGTASLNVTVAASIVLH 141
+NV +A +IV++
Sbjct: 135 --RFCINVAMAGAIVMY 149
>gi|313676389|ref|YP_004054385.1| tRNA/rRNA methyltransferase (spou) [Marivirga tractuosa DSM 4126]
gi|312943087|gb|ADR22277.1| tRNA/rRNA methyltransferase (SpoU) [Marivirga tractuosa DSM 4126]
Length = 181
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+V+ N+ +NVG+ R+ AF + ++ L G R+ N + G+T V + HF +
Sbjct: 27 LVLDNVRSMNNVGSAFRTGDAFLIEKIYLCGITAQPPHREINK-TALGATETVEWEHFEN 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFK--KSTAFLLGNEGMGLSAKECEICDFF 117
DA LK I VE +N++ + + K + AF+ GNE G+ + + D
Sbjct: 86 TLDAVAKLKQDGYKIMSVEQAENSLSLEKFAPKADEKYAFIFGNEVYGVEQEVVDQSDHC 145
Query: 118 VYIPQYGGGTASLNVTVAASIVLHH 142
+ IPQ+ G SLN++V+ +VL H
Sbjct: 146 LEIPQF-GTKHSLNISVSIGVVLWH 169
>gi|260663232|ref|ZP_05864124.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
fermentum 28-3-CHN]
gi|260552424|gb|EEX25475.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
fermentum 28-3-CHN]
Length = 251
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ +A HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 103 FLILDELADPHNLGSILRTADAAGVHGIIIPKRRSVGLTSVVAKTSTGAIEHVPVARVTN 162
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L L+ + + G ++ D + K + A ++GNEG G+S + CD +
Sbjct: 163 LVQVAKELQKRGVWLFGTDM--QGTDYRRWDAKGAVALVIGNEGKGISPLLKKTCDEMLT 220
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++ ++ GF+ R
Sbjct: 221 IPMI-GHVQSLNASVAASLL-----IYQGFATR 247
>gi|237743868|ref|ZP_04574349.1| 23S rRNA methyltransferase [Fusobacterium sp. 7_1]
gi|229432899|gb|EEO43111.1| 23S rRNA methyltransferase [Fusobacterium sp. 7_1]
Length = 234
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D I G N ++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWIYGAAGEAN-INYNEEDYPNKVILVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|16079917|ref|NP_390743.1| RNA methylase [Bacillus subtilis subsp. subtilis str. 168]
gi|221310807|ref|ZP_03592654.1| hypothetical protein Bsubs1_15641 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315132|ref|ZP_03596937.1| hypothetical protein BsubsN3_15547 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320050|ref|ZP_03601344.1| hypothetical protein BsubsJ_15453 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324332|ref|ZP_03605626.1| hypothetical protein BsubsS_15612 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402777021|ref|YP_006630965.1| RNA methylase [Bacillus subtilis QB928]
gi|428280340|ref|YP_005562075.1| hypothetical protein BSNT_04181 [Bacillus subtilis subsp. natto
BEST195]
gi|452915074|ref|ZP_21963700.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Bacillus subtilis MB73/2]
gi|81637729|sp|P94538.2|YSGA_BACSU RecName: Full=Uncharacterized tRNA/rRNA methyltransferase YsgA
gi|1770029|emb|CAA99602.1| hypothetical protein [Bacillus subtilis]
gi|2635330|emb|CAB14825.1| putative RNA methylase [Bacillus subtilis subsp. subtilis str. 168]
gi|291485297|dbj|BAI86372.1| hypothetical protein BSNT_04181 [Bacillus subtilis subsp. natto
BEST195]
gi|402482201|gb|AFQ58710.1| Putative RNA methylase [Bacillus subtilis QB928]
gi|407960873|dbj|BAM54113.1| RNA methylase [Bacillus subtilis BEST7613]
gi|407965703|dbj|BAM58942.1| RNA methylase [Bacillus subtilis BEST7003]
gi|452115422|gb|EME05818.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Bacillus subtilis MB73/2]
Length = 248
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ ++L G +AF + GS H+ R+ S D L
Sbjct: 117 NLGTMIRTADAAGLDAVVL-GDGTADAFNGKTLRSAQGSHFHIPVVRRNLPSYVDE---L 172
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
K++ + G + N + P +S A ++GNEG G+ A E D +Y+P YG
Sbjct: 173 KAEGVKVYGTAL-QNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAE 231
Query: 128 ASLNVTVAASIVLHHF 143
SLNV VAA+I+++H
Sbjct: 232 -SLNVAVAAAILVYHL 246
>gi|33860979|ref|NP_892540.1| tRNA/rRNA methyltransferase SpoU [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33639711|emb|CAE18881.1| tRNA/rRNA methyltransferase (SpoU) [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 223
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 6/139 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD----FNAFGSHGSTSHVNFRHFHSLS 61
V+V + K HN+ + R+ A GV E + +D FN+ + GS V + +
Sbjct: 24 VLVEAVNKPHNLSAILRTCDAAGVFEANFISEKDKVKTFNS-TAQGSQKWVKLNNHETTI 82
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK K + G + + + D + ++T F+LG E GLS + D ++IP
Sbjct: 83 SAVSELKKKGFKLYGTTLNERSTDYRNFDYSENTCFVLGAEKWGLSDQLISKVDESIFIP 142
Query: 122 QYGGGTASLNVTVAASIVL 140
G SLNV+VA SI+L
Sbjct: 143 M-SGMVQSLNVSVATSILL 160
>gi|418031949|ref|ZP_12670432.1| hypothetical protein BSSC8_13760 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351470812|gb|EHA30933.1| hypothetical protein BSSC8_13760 [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 248
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ ++L G +AF + GS H+ R+ S D L
Sbjct: 117 NLGTMIRTADAAGLDAVVL-GDGTADAFNGKTLRSAQGSHFHIPVVRRNLPSYVDE---L 172
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
K++ + G + N + P +S A ++GNEG G+ A E D +Y+P YG
Sbjct: 173 KAEGVKVYGTAL-QNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAE 231
Query: 128 ASLNVTVAASIVLHHF 143
SLNV VAA+I+++H
Sbjct: 232 -SLNVAVAAAILVYHL 246
>gi|410647537|ref|ZP_11357968.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola agarilytica
NO2]
gi|410132958|dbj|GAC06367.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola agarilytica
NO2]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
V + + K HNV + RS A G++ + + + + GS V S+ DA
Sbjct: 28 VCLEQVHKPHNVSAILRSCDAVGINRIHGVWDQKTKLRKGTAMGSEHWVKTEMHSSIDDA 87
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK ++ + ++D++VD + + + TA +LG E G + + + D + IP
Sbjct: 88 VGVLKQQNMQVLVTHLSDDSVDFREIDYTQPTAIILGQERHGATEEAIALADKNIVIPMV 147
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD 155
G SLNV+VAA++VL+ ++R RD
Sbjct: 148 -GMVQSLNVSVAAALVLYE-------AQRQRD 171
>gi|347524905|ref|YP_004831653.1| tRNA/rRNA methyltransferase [Lactobacillus ruminis ATCC 27782]
gi|345283864|gb|AEN77717.1| tRNA/rRNA methyltransferase [Lactobacillus ruminis ATCC 27782]
Length = 248
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ +V +
Sbjct: 102 FLILDGIEDPHNLGSILRTADAAGVHGIIIPKRRAVQLTSTVAKTSTGAVEYVPVCRVTN 161
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ A LK + I G ++ D K TA ++GNEG G+S+ + CD +
Sbjct: 162 LAQAVDELKHRGLWIFGTDMKGQ--DFRNWDAKGPTALVIGNEGKGISSLLKKKCDEMLT 219
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTR 154
IP G SLN +VAAS++++ GF+ R +
Sbjct: 220 IPMI-GHVQSLNASVAASLLIYQ-----GFTSRGK 248
>gi|321312399|ref|YP_004204686.1| putative RNA methylase [Bacillus subtilis BSn5]
gi|320018673|gb|ADV93659.1| putative RNA methylase [Bacillus subtilis BSn5]
Length = 248
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ ++L G +AF + GS H+ R+ S D L
Sbjct: 117 NLGTMIRTADAAGLDAVVL-GDGTADAFNGKTLRSAQGSHFHIPVVRRNLPSYVDE---L 172
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
K++ + G + N + P +S A ++GNEG G+ A E D +Y+P YG
Sbjct: 173 KAEGVKVYGTAL-QNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAE 231
Query: 128 ASLNVTVAASIVLHHF 143
SLNV VAA+I+++H
Sbjct: 232 -SLNVAVAAAILVYHL 246
>gi|224369437|ref|YP_002603601.1| rRNA methylase-family protein [Desulfobacterium autotrophicum HRM2]
gi|223692154|gb|ACN15437.1| rRNA methylase-family protein [Desulfobacterium autotrophicum HRM2]
Length = 161
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGST-SHVNFRHFHSLSDARV 65
++H++ K N+GTL RSA G S + +G R G T + + H + D
Sbjct: 18 LIHSV-KGLNIGTLWRSAYILGASFIFTIGNRYSRQPGDVTRTWTRIPLFHHDTFEDFYS 76
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
L D + GVE+ D AV + + +LLGNE +GLS E C V +P
Sbjct: 77 HL-PHDTRLIGVEMGDTAVALDRFDHPSRAVYLLGNEQLGLSPGVMEKCHRLVKLP---- 131
Query: 126 GTASLNVTVAASIVLH 141
G SLNV VA S+V++
Sbjct: 132 GAFSLNVAVAGSLVMY 147
>gi|449095310|ref|YP_007427801.1| putative RNA methylase [Bacillus subtilis XF-1]
gi|449029225|gb|AGE64464.1| putative RNA methylase [Bacillus subtilis XF-1]
Length = 248
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ ++L G +AF + GS H+ R+ S D L
Sbjct: 117 NLGTMIRTADAAGLDAVVL-GDGTADAFNGKTLRSAQGSHFHIPVVRRNLPSYVDE---L 172
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
K++ + G + N + P +S A ++GNEG G+ A E D +Y+P YG
Sbjct: 173 KAEGVKVYGTAL-QNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAE 231
Query: 128 ASLNVTVAASIVLHHF 143
SLNV VAA+I+++H
Sbjct: 232 -SLNVAVAAAILVYHL 246
>gi|294638299|ref|ZP_06716552.1| tRNA guanosine-2'-O-methyltransferase [Edwardsiella tarda ATCC
23685]
gi|291088552|gb|EFE21113.1| tRNA guanosine-2'-O-methyltransferase [Edwardsiella tarda ATCC
23685]
Length = 219
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGR--RDFNAFGSHGSTSHVNFRHFHSLS 61
V + + K HNV + R+A A GV ++ + G+ R + + GS S V+ + ++
Sbjct: 11 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKSMRTLVSTAA-GSNSWVSVKTHRDIA 69
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK + I ++ AVD + + + T L+G E G+SA+ ++ D + IP
Sbjct: 70 SAVSELKGQGMQILATNLSATAVDFREIDYTRPTCILMGQEKRGISAEALQLADRDIIIP 129
Query: 122 QYGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 130 MV-GMVQSLNVSVASALILY 148
>gi|169830056|ref|YP_001700214.1| trmH family tRNA/rRNA methyltransferase yacO [Lysinibacillus
sphaericus C3-41]
gi|168994544|gb|ACA42084.1| Putative trmH family tRNA/rRNA methyltransferase yacO
[Lysinibacillus sphaericus C3-41]
Length = 250
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A G +I+ RR + A S G+ HV ++
Sbjct: 100 FLILDELEDPHNLGSIMRTADAIGAHGIIIPKRRSVSLTAVVAKSSTGAIEHVPVVRVNN 159
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + +VD + A ++G+EG G+ E CDF +
Sbjct: 160 LAQTVDELKERGIWIAGTD-AKGSVDYRKMDATLPLAIIIGSEGKGMGRLLKEKCDFLYH 218
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAA+++++
Sbjct: 219 LPMVGHVT-SLNASVAAALLMYE 240
>gi|260774740|ref|ZP_05883643.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio coralliilyticus
ATCC BAA-450]
gi|260609302|gb|EEX35454.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Vibrio coralliilyticus
ATCC BAA-450]
Length = 227
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDARV 65
+ + K +NV + R+A A G+ ++ V D S G+ + V S+ A
Sbjct: 24 LEEVHKPNNVSAVIRTADATGIHKIHAVWPNDMRTLSHTSAGARNWVEVETHDSIGKAVA 83
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LK + I ++D AVD + + K TA +LG+E +G S + ++ D + IP G
Sbjct: 84 ELKDQGMQILVTNLSDTAVDFREIDYTKPTAIILGSEKIGASEEAKQLADQDIIIPMI-G 142
Query: 126 GTASLNVTVAASIVLH 141
SLNV+VA++++++
Sbjct: 143 MVQSLNVSVASAVIMY 158
>gi|228470939|ref|ZP_04055784.1| SpoU rRNA methylase family protein [Porphyromonas uenonis 60-3]
gi|228307336|gb|EEK16350.1| SpoU rRNA methylase family protein [Porphyromonas uenonis 60-3]
Length = 186
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
+++ N+ HNVG++ R+A AF + E++LVG H G+ V +RH
Sbjct: 29 ILLDNVRSMHNVGSIFRTADAFRIEELLLVG---ITGCPPHPLLHKTAIGAEEAVPWRHL 85
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPF--KKSTAFLLGNEGMGLSAKECEICD 115
S +A + + I +E T ++ + P + ++GNE G+S + + D
Sbjct: 86 DSAIEALEQYRQEGRTILALEQTHQSITLGSQPALDDRGAVLIVGNEVHGVSDEVIQYAD 145
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLH 141
+ + IPQY G SLNV+VA I ++
Sbjct: 146 YCLEIPQY-GTKHSLNVSVATGIAIY 170
>gi|383826741|ref|ZP_09981863.1| spou rRNA methylase [Mycobacterium xenopi RIVM700367]
gi|383332109|gb|EID10593.1| spou rRNA methylase [Mycobacterium xenopi RIVM700367]
Length = 183
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+G + R+A AF V + +VGRR +N G+ + + RH + ++
Sbjct: 35 HIAIENFGHDANIGAVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQRLRHHDTTAELL 94
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ A + Q + + G EG G++ + V I Q+
Sbjct: 95 DFAAAAGLTVVAVDNVPGAARLEQTGLPRHCLMVFGQEGPGITDEAKAGAALTVSIAQF- 153
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV VAA I +H +
Sbjct: 154 GSTRSINVAVAAGIAMHAW 172
>gi|90581394|ref|ZP_01237189.1| putative tRNA methyltransferase [Photobacterium angustum S14]
gi|90437371|gb|EAS62567.1| putative tRNA methyltransferase [Vibrio angustum S14]
Length = 241
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSD 62
V + + K +NV + R+A A GV ++ V ++ SH G+ + V S+ +
Sbjct: 22 VCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPKEGMKVLSHTSAGARNWVELDTHDSMVE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++D A+D + K TA +LG E G++A+ + D + IP
Sbjct: 82 AVQALKDQGMQVLATNLSDTAIDFRDVDYTKPTAIILGGEKNGITAEALAMADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|410639544|ref|ZP_11350090.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola chathamensis
S18K6]
gi|410140863|dbj|GAC08277.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola chathamensis
S18K6]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
V + + K HNV + RS A G++ + + + + GS V S+ DA
Sbjct: 28 VCLEQVHKPHNVSAILRSCDAVGINRIHGVWDQKTKLRKGTAMGSEHWVKTEMHSSIDDA 87
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK ++ + ++D++VD + + + TA +LG E G + + + D + IP
Sbjct: 88 VGVLKQQNMQVLVTHLSDDSVDFREIDYTQPTAIILGQERHGATEEAIALADKNIVIPMV 147
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD 155
G SLNV+VAA++VL+ ++R RD
Sbjct: 148 -GMVQSLNVSVAAALVLYE-------AQRQRD 171
>gi|386361244|ref|YP_006059489.1| rRNA methylase [Thermus thermophilus JL-18]
gi|383510271|gb|AFH39703.1| rRNA methylase [Thermus thermophilus JL-18]
Length = 194
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V++ N+ K HN+ + R+ A GV E V G FN S GS V R +
Sbjct: 25 VLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNE-TSGGSHKWVYLRVHPDIH 83
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+A FLK + + + ++A D + + K T LLG E G+S + + D + IP
Sbjct: 84 EAFRFLKERGFTVYATALREDARDFREVDYTKPTCVLLGAEKWGVSEEALALSDGAIKIP 143
Query: 122 QYGGGTASLNVTVAASIVL---HHFGVWAGFSERTR 154
G SLNV+VAA+++L + AG ER R
Sbjct: 144 ML-GMVQSLNVSVAAAVILFEAQRQRLKAGLYERPR 178
>gi|51598313|ref|YP_072501.1| spoU protein [Borrelia garinii PBi]
gi|51572884|gb|AAU06909.1| spoU protein [Borrelia garinii PBi]
Length = 218
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + N R+ G S++ ++ +R+ N + GS+ +N +++ A
Sbjct: 38 VLEDIFQPQNASATIRTGEILGFSDVHIISKRNKCTLNPDVTLGSSQWINLNRYNNTKFA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I + + ++++ P A G E GLSA+ E D ++ IP +
Sbjct: 98 LDRLKSDGYSIVATSLDEQSINLEDFPINNKMAVFFGTELTGLSAEAFEAADLYLKIPMH 157
Query: 124 GGGTASLNVTVAASIVLHHFGV 145
G T S N++VA +IV++ +
Sbjct: 158 -GFTQSYNISVAVAIVMYSLSI 178
>gi|332304823|ref|YP_004432674.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola sp. 4H-3-7+YE-5]
gi|332172152|gb|AEE21406.1| tRNA guanosine-2'-O-methyltransferase [Glaciecola sp. 4H-3-7+YE-5]
Length = 250
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
V + + K HNV + RS A G++ + + + + GS V S+ DA
Sbjct: 22 VCLEQVHKPHNVSAILRSCDAVGINRIHGVWDQKTKLRKGTAMGSEHWVKTEMHSSIDDA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK ++ + ++D++VD + + + TA +LG E G + + + D + IP
Sbjct: 82 VGVLKQQNMQVLVTHLSDDSVDFREIDYTQPTAIILGQERHGATEEAIALADKNIVIPMV 141
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD 155
G SLNV+VAA++VL+ ++R RD
Sbjct: 142 -GMVQSLNVSVAAALVLYE-------AQRQRD 165
>gi|336173726|ref|YP_004580864.1| tRNA/rRNA methyltransferase SpoU [Lacinutrix sp. 5H-3-7-4]
gi|334728298|gb|AEH02436.1| tRNA/rRNA methyltransferase (SpoU) [Lacinutrix sp. 5H-3-7-4]
Length = 166
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
++ N+ N+G+L R+A AFGV ++I G + G S + + ++ +
Sbjct: 19 IICENVTNAPNIGSLFRTADAFGVEKIIFCGSKI--PLGRKMTKTSRTTEKFIKYQERET 76
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQH--PFKKSTAFLLGNEGMGLSAKECEICDFF 117
+ + + LK + I +EITDN+ + P KK A ++G+E G+S + D
Sbjct: 77 VEEVIIELKKSNYSILALEITDNSKPIHTFNVPTKKPIAIVIGDENFGISNTALKQTDAI 136
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
++I +G +S+NV A ++ L+
Sbjct: 137 IHIDMFGQN-SSMNVVQATTVALYEI 161
>gi|359770898|ref|ZP_09274366.1| putative RNA methyltransferase [Gordonia effusa NBRC 100432]
gi|359311940|dbj|GAB17144.1| putative RNA methyltransferase [Gordonia effusa NBRC 100432]
Length = 192
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H +++D
Sbjct: 44 HIAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHIEHHETVADLV 103
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ + V+ T A + + L G EG G+S D V I Q+
Sbjct: 104 AWARAAGLAVVAVDNTPGAERLETAKLPRDCVLLFGQEGPGVSEDAQAAADLTVSIAQF- 162
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 163 GSTRSINAGVAAGIAMHAW 181
>gi|329946190|ref|ZP_08293803.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 170
str. F0386]
gi|328527788|gb|EGF54779.1| RNA methyltransferase, TrmH family [Actinomyces sp. oral taxon 170
str. F0386]
Length = 245
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N+++ N+G++ RSA AF V+ + ++GRR +N G+ + +++ RH +
Sbjct: 98 HIAIENVSQDLNIGSIVRSANAFNVAGVHIIGRRRWNKRGAMVTNRYLDVRHHPEPGELL 157
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + ++ G++ A + + + G+EG G+SA+ C + I QY
Sbjct: 158 DWAAASGYEVIGIDNGPGARPLEAAALPERCLMVFGSEGEGISAELSAGCASLLRIGQY- 216
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV AA++ +H +
Sbjct: 217 GSTRSINVAAAAAVAMHTW 235
>gi|404444462|ref|ZP_11009619.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium vaccae ATCC 25954]
gi|403653777|gb|EJZ08742.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium vaccae ATCC 25954]
Length = 214
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+G++ R+A AF V + +VGRR +N G+ + + RH + ++
Sbjct: 66 HIAIENFGNDANIGSVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQRLRHHDTTAELL 125
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ A + + ++ + G EG G++ V I Q+
Sbjct: 126 EFAAEAGLAVVAVDNVPGAARIEEADLPRNCLLIFGQEGPGITDDAKAGAPLTVSIAQF- 184
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 185 GSTRSINAGVAAGIAMHAW 203
>gi|89076058|ref|ZP_01162418.1| putative tRNA methyltransferase [Photobacterium sp. SKA34]
gi|89048210|gb|EAR53792.1| putative tRNA methyltransferase [Photobacterium sp. SKA34]
Length = 241
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSD 62
V + + K +NV + R+A A GV ++ V ++ SH G+ + V S+ +
Sbjct: 22 VCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPKENMKVLSHTSAGARNWVELDTHDSMVE 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + + ++D A+D + K TA +LG E G++A+ + D + IP
Sbjct: 82 AVQTLKDQGMQVLATNLSDTAIDFRDVDYTKPTAVILGGEKNGITAEALAMADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|184154739|ref|YP_001843079.1| RNA methyltransferase [Lactobacillus fermentum IFO 3956]
gi|183226083|dbj|BAG26599.1| RNA methyltransferase [Lactobacillus fermentum IFO 3956]
Length = 251
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ +A HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 103 FLILDELADPHNLGSILRTADAAGVHGIIIPKRRSVGLTSVVAKTSTGAIEHVPVARVTN 162
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L L+ + + G ++ D + K + A ++GNEG G+S + CD +
Sbjct: 163 LVQVAKELQKRGVWLFGTDM--QGTDCRRWDAKGAVALVIGNEGKGISPLLKKTCDEMLT 220
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++ ++ GF+ R
Sbjct: 221 IPMI-GHVQSLNASVAASLL-----IYQGFATR 247
>gi|406959980|gb|EKD87190.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 182
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHS 59
Y+++ N+ +N+G + R A A ++IL G + S +T V++ HF
Sbjct: 28 YIILDNVLDTYNIGAIFRLADAVAAEKVILCGESETPPHTRIKKASINTTEWVSWEHFAD 87
Query: 60 LSDARVFLKSK--DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
A LKS+ + + +E + +V + +K A ++G+E G+S + EI D
Sbjct: 88 AKTAISSLKSQIPNLKVVAIEQSPKSVSYDKFEYKFPLALVVGHESNGVSKEVLEISDAI 147
Query: 118 VYIPQYGGGTASLNVTVAASIVLHH 142
+ +P +G SLNV V+ IVL+
Sbjct: 148 IELPMFGVN-KSLNVMVSLGIVLYE 171
>gi|352096318|ref|ZP_08957198.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8016]
gi|351677012|gb|EHA60163.1| tRNA guanosine-2'-O-methyltransferase [Synechococcus sp. WH 8016]
Length = 229
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSE---MILVGR-RDFNAFGSHGSTSHVNFRH 56
M V+V ++ K HN+ + RS A GV E + L GR R +N+ + GS V
Sbjct: 19 MANLTVLVEHVDKPHNLSAILRSCDAVGVLEAHAVSLSGRSRTYNS-TAQGSQRWVPLHD 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
++ A LK + + G ++ +AVD F +AF+LG E GLS ++ D
Sbjct: 78 HPNIEAAVKKLKDRGFHLYGTNLSVDAVDYRDCDFTGPSAFVLGAEKWGLSENATQLMDT 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
V+IP G SLNV+VA + +L
Sbjct: 138 DVFIPMR-GMVQSLNVSVATATLL 160
>gi|300780369|ref|ZP_07090225.1| TrmH family RNA methyltransferase [Corynebacterium genitalium ATCC
33030]
gi|300534479|gb|EFK55538.1| TrmH family RNA methyltransferase [Corynebacterium genitalium ATCC
33030]
Length = 223
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF + +VGR+ +N G+ + + + H ++ D
Sbjct: 75 HVAIENFENDMNIGTVVRTANAFMAEAVHIVGRKRWNRRGAMVTDRYQHIIHHETVDDLL 134
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ + ++ T +V + + L G EG G++A+ + I Q+
Sbjct: 135 EWATARGVAVVAIDNTPGSVPLETAELPRDCVLLFGQEGPGVTAEAQQAAVMTCSIAQF- 193
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 194 GSTRSINAGVAAGIAMHTW 212
>gi|315127927|ref|YP_004069930.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas sp.
SM9913]
gi|315016441|gb|ADT69779.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas sp.
SM9913]
Length = 228
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNF--RHFH-SLSD 62
V + ++ K HN+ + R+A A G + V ++ S N+ H H ++ D
Sbjct: 22 VCLEDVHKHHNLSAIVRTADAVGCHHVHAVWPEKQKWLTNNTSGGSKNWLDTHLHKNIDD 81
Query: 63 ARVFLKS--KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A +++ D I ++++AVD + + K TA ++G E G+S K E D + I
Sbjct: 82 AAASIRAHNPDVQILATHLSEDAVDFREIDYTKPTAIIVGQEKTGISEKALEYADQNIII 141
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPES 180
P G SLNV+VAA+++L ++R R+ + Q++ E
Sbjct: 142 P-MQGMVQSLNVSVAAALILFE-------AQRQRELAGLYNRNMLSEQIKHPLYFEGCHP 193
Query: 181 IIEMRRSRRENASNGFFDGSGNDVSSSSLLDAL 213
II R+ +++N + G V+ AL
Sbjct: 194 II-ARQCKQKNLPYPALNEHGEIVADEQFWQAL 225
>gi|410634238|ref|ZP_11344875.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola arctica
BSs20135]
gi|410146094|dbj|GAC21742.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola arctica
BSs20135]
Length = 236
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
+ + + K HNV + RS A GV E+ + + + + GS + V + + +A
Sbjct: 28 LCLEQLDKPHNVSAIVRSCDAVGVYEVHAVWDNKPEIRKSTAMGSENWVYTKEHSCIENA 87
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK+++ + ++DNAVD + + + TA +LG E G + + + + IP
Sbjct: 88 VSHLKAQNMQVLVTNLSDNAVDFREIDYTQPTAIILGQEKYGATDEAVALASQDIIIPMV 147
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA+++L+
Sbjct: 148 -GMVQSLNVSVAAALILY 164
>gi|357018855|ref|ZP_09081117.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium thermoresistibile
ATCC 19527]
gi|356481414|gb|EHI14520.1| tRNA/rRNA methyltransferase SpoU [Mycobacterium thermoresistibile
ATCC 19527]
Length = 203
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+G++ R+A AF V + +VGRR +N G+ + + RH + +
Sbjct: 55 HIAIENFGNDANIGSVVRTANAFAVHTVHIVGRRRWNRRGAMVTDRYQRLRHHDTTAALL 114
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F D + V+ AV + + + G EG G++ V I Q+
Sbjct: 115 SFAAEHDLTVVAVDNIPGAVRLEHTELPRHCLMIFGQEGPGITEDAKAGAAMTVSIAQF- 173
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 174 GSTRSINAAVAAGIAMHTW 192
>gi|407978595|ref|ZP_11159424.1| tRNA/rRNA methyltransferase [Bacillus sp. HYC-10]
gi|407414791|gb|EKF36417.1| tRNA/rRNA methyltransferase [Bacillus sp. HYC-10]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +++ RR A S G+ H+ +
Sbjct: 99 FIILDEIEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVAKVTN 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS A +K + + G + + D Q A ++G+EG G+ E CDF +
Sbjct: 159 LSRALDEMKERGIWVAGTDASAKQ-DYRQFDGTMPLALVIGSEGKGIGRLIKEKCDFLIK 217
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G SLN +VAAS++++
Sbjct: 218 LP-MAGKVTSLNASVAASLLMYE 239
>gi|430758674|ref|YP_007208630.1| hypothetical protein A7A1_3182 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430023194|gb|AGA23800.1| Hypothetical protein YsgA [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 248
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 14/146 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNF--RHF 57
+++ + N+GT+ R+A A G+ ++L G +AF + GS H+ R+
Sbjct: 107 LLIDAVQDPGNLGTMIRTADAAGLDAVVL-GDGTADAFNGKTLRSAQGSHFHIPVVRRNL 165
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
S D LK++ + G + N + P +S A ++GNEG G+ A E D
Sbjct: 166 PSYVDE---LKAEGVKVYGTAL-QNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLN 221
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+Y+P YG SLNV VAA+I+++H
Sbjct: 222 LYVPLYGQAE-SLNVAVAAAILVYHL 246
>gi|410629046|ref|ZP_11339760.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola mesophila KMM
241]
gi|410151415|dbj|GAC26529.1| tRNA (guanosine-2'-O-)-methyltransferase [Glaciecola mesophila KMM
241]
Length = 256
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
V + + K HNV + RS A G++ + + + + GS V S+ DA
Sbjct: 28 VCLEQVHKPHNVSAVLRSCDAVGINRIHGVWDQKTKIRKGTAMGSEHWVKTDMHTSIGDA 87
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK ++ + ++D++VD + + + TA +LG E G + + + D + IP
Sbjct: 88 VSVLKQQNMQVLVTHLSDDSVDFREIDYTQPTAIILGQEKHGATEEAISLADKNIVIPMV 147
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD-GNKYVVAERSARQVRRSF 173
G SLNV+VAA++VL+ ++R R+ Y + + S + +R
Sbjct: 148 -GMVQSLNVSVAAAVVLYE-------AQRQREVAGMYAIQQLSEEECQRVL 190
>gi|406991177|gb|EKE10725.1| tRNA/rRNA methyltransferase (SpoU) [uncultured bacterium]
Length = 163
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH-----------------G 47
Y++ HNI HNVG + R+ G S++ L G A G
Sbjct: 7 YIIAHNIRSAHNVGAIFRTCDGAGASKIYLTGYTPEPASSEKEEKMKTKAEKMLEKTALG 66
Query: 48 STSHVNFRHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLS 107
+ ++V + + D + LK + I +E T N+ + + A +LGNE G++
Sbjct: 67 AENNVPWERVERIDDLMLKLKKEGFSIVALEKTKNSTPMNELHMNFPIALILGNEVDGVN 126
Query: 108 AKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHF 143
+ E CD + IP G SLNV+VAA I ++
Sbjct: 127 EELLEKCDSIMEIPMR-GKKESLNVSVAAGIGIYKI 161
>gi|226184008|dbj|BAH32112.1| putative methyltransferase [Rhodococcus erythropolis PR4]
Length = 230
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H +S+
Sbjct: 82 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHIVHHADISELV 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + I V+ T +V + + L G EG G++ E+ V I Q+
Sbjct: 142 EYARENSLTIVAVDNTPGSVPLETASLPRECILLFGQEGPGVTEHAKEVASMTVSIAQF- 200
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 201 GSTRSINAGVAAGIAMHAW 219
>gi|359423422|ref|ZP_09214559.1| putative RNA methyltransferase [Gordonia amarae NBRC 15530]
gi|358241345|dbj|GAB04141.1| putative RNA methyltransferase [Gordonia amarae NBRC 15530]
Length = 218
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H ++ +
Sbjct: 70 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLMHHDTVDELM 129
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ T +V + + L G EG G+S D V I Q+
Sbjct: 130 AWAREQGIAVVAVDNTPGSVPIETADLPRECVLLFGQEGPGVSETAQLRADLTVSIAQF- 188
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 189 GSTRSINAGVAAGIAMHAW 207
>gi|422340007|ref|ZP_16420963.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370446|gb|EHG17829.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 234
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
+++ I N G + RSA F V ++I++ R+ S G+ +VN +
Sbjct: 91 LILDEIQDPRNFGAILRSAEVFKV-DLIIIPERNSVRINETVIKTSTGAIEYVNISKVTN 149
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LSD LK D + G N ++ + + +LGNEG G+ K E CD V
Sbjct: 150 LSDTINKLKKLDYWVYGAAGEAN-INYNEEDYSNKVVLVLGNEGSGIRKKVREHCDKLVK 208
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP Y G SLNV+VA+ I+L
Sbjct: 209 IPMY-GQINSLNVSVASGILLSRI 231
>gi|359435855|ref|ZP_09225988.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20311]
gi|359444198|ref|ZP_09234001.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20439]
gi|358029442|dbj|GAA62237.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20311]
gi|358041949|dbj|GAA70250.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20439]
Length = 228
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 14/213 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNF--RHFH-SLSD 62
V + ++ K HN+ + R+A A G + V ++ S N+ H H ++ D
Sbjct: 22 VCLEDVHKHHNLSAIVRTADAVGCHHVHAVWPEKQKWLTNNTSGGSKNWLDTHLHRNIDD 81
Query: 63 ARVFLKS--KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A +++ D I ++++AVD + + + TA ++G E G+S + E D + I
Sbjct: 82 AVASMRAHNPDVQILATHLSEDAVDFREIDYTRPTAIIVGQEKTGISPQALEYADQNIII 141
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPES 180
P G SLNV+VAA+++L ++R RD +++ E
Sbjct: 142 P-MQGMVQSLNVSVAAALILFE-------AQRQRDLAGLYNRNMLGEEIKHPMYFEGCHP 193
Query: 181 IIEMRRSRRENASNGFFDGSGNDVSSSSLLDAL 213
II R+ +++N D +G V+ AL
Sbjct: 194 II-ARQCKQKNLPYPALDENGEIVADEQFWQAL 225
>gi|262203919|ref|YP_003275127.1| tRNA/rRNA methyltransferase SpoU [Gordonia bronchialis DSM 43247]
gi|262087266|gb|ACY23234.1| tRNA/rRNA methyltransferase (SpoU) [Gordonia bronchialis DSM 43247]
Length = 225
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H ++SD
Sbjct: 77 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLMHHETVSDLL 136
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + V+ T A + + L G EG G+S D V I Q+
Sbjct: 137 AWARVAGLSVVAVDNTPGARPLETVELPRECVLLFGQEGPGVSDDAQAQADLTVSIAQF- 195
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 196 GSTRSINAGVAAGIAMHSW 214
>gi|421527345|ref|ZP_15973948.1| 23S rRNA methyltransferase [Fusobacterium nucleatum ChDC F128]
gi|402256553|gb|EJU07032.1| 23S rRNA methyltransferase [Fusobacterium nucleatum ChDC F128]
Length = 234
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G N ++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAAGEAN-INYNEEDYPNKVVLVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|145220210|ref|YP_001130919.1| RNA methyltransferase [Chlorobium phaeovibrioides DSM 265]
gi|145206374|gb|ABP37417.1| RNA methyltransferase, TrmH family, group 3 [Chlorobium
phaeovibrioides DSM 265]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAF---GSHGSTSHVNFRHFHSL 60
VV+ + HN+G + R+A A ++LV + NA S G+ SH+ SL
Sbjct: 103 VVLQGLDDPHNIGAIIRTAEAVAADGVVLVEGKGAPVNAVVHKASAGALSHMRVAKVKSL 162
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ FL + + ++ + + T F+ TA +LG EG GL+ + E CD + I
Sbjct: 163 VRSLEFLHANGIRVIATDM-EAETNYTDADFRLPTAIVLGAEGSGLAPEAMEYCDETLRI 221
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+V A +VL+
Sbjct: 222 PM-AGCVESLNVSVTAGVVLYEV 243
>gi|336173167|ref|YP_004580305.1| tRNA/rRNA methyltransferase SpoU [Lacinutrix sp. 5H-3-7-4]
gi|334727739|gb|AEH01877.1| tRNA/rRNA methyltransferase (SpoU) [Lacinutrix sp. 5H-3-7-4]
Length = 220
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 9/182 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR---RDFNAFGSHGSTSHVNFRHFHSLSD 62
V ++ + HN + RS FG+ E+ +V + + + G+ V+ +H++ D
Sbjct: 35 VATEDVYQLHNTSAVIRSCDVFGIQEVNIVEEVNAKRIDREIAMGAQKWVDLNRYHTVKD 94
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +K K + N ++ K + F G E GLS + + D F+ IP
Sbjct: 95 AIQDVKQKGYQVVATTPHANDCNLRDFDVTKKSCFFFGRETEGLSQEVLDEADVFLKIPM 154
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQVRRSFCAEKPESII 182
G T SLN++V+A+I+L H +E + + + E + R +C + +S
Sbjct: 155 V-GFTESLNISVSAAIILQHVT-----TELKQTNINWQLTETEKLEKRLDWCKKTIKSYD 208
Query: 183 EM 184
E+
Sbjct: 209 EI 210
>gi|313884744|ref|ZP_07818499.1| RNA methyltransferase, TrmH family, group 3 [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620005|gb|EFR31439.1| RNA methyltransferase, TrmH family, group 3 [Eremococcus coleocola
ACS-139-V-Col8]
Length = 266
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 8/144 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
++++ I HN+G++ RSA A GV +I+ RR + G S G+ H+ +
Sbjct: 118 FLILDGIEDPHNLGSIIRSADALGVHGIIIPKRRAASLTGIVAKTSTGALEHIPVVRVTN 177
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK+K I ++ D+ + A ++GNEG G+S K + D +
Sbjct: 178 LGQVVDQLKTKGVWIFATDMAGQ--DIRSWNSQGPIAVIIGNEGQGVSKKLLDHADQTIT 235
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G SLN +VAASI+++
Sbjct: 236 IPMV-GHVQSLNASVAASIIMYEV 258
>gi|418053673|ref|ZP_12691729.1| tRNA/rRNA methyltransferase (SpoU) [Hyphomicrobium denitrificans
1NES1]
gi|353211298|gb|EHB76698.1| tRNA/rRNA methyltransferase (SpoU) [Hyphomicrobium denitrificans
1NES1]
Length = 146
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 11 IAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTS--HVNFRHFHSLSDARVFLK 68
++K N+G L RSA AFG S VG + A +H TS ++ H++ + + L
Sbjct: 1 MSKSLNLGNLMRSAHAFGASFTFTVGAT-YKAAEAHADTSKSQLHLPHYNWATPDDMALP 59
Query: 69 SKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGG 126
C + G+E+ D+A+D+ +HP + A++LG E LS E CD+ + IP
Sbjct: 60 G-GCKLVGIELLDDAIDLPSFRHPLR--AAYVLGPELGSLSEPLVERCDYVIKIPT---- 112
Query: 127 TASLNVTVAASIVLH 141
+NV +A +IV++
Sbjct: 113 RFCINVAMAGAIVMY 127
>gi|335998617|ref|ZP_08564526.1| tRNA/rRNA methyltransferase [Lactobacillus ruminis SPM0211]
gi|335348016|gb|EGM49525.1| tRNA/rRNA methyltransferase [Lactobacillus ruminis SPM0211]
Length = 248
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 23/160 (14%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ +V +
Sbjct: 102 FLILDGIEDPHNLGSILRTADAAGVHGIIIPKRRAVQLTSTVAKTSTGAVEYVPVCRVTN 161
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKK-----STAFLLGNEGMGLSAKECEIC 114
L+ LK + I G D+ H F+K TA ++GNEG G+S+ + C
Sbjct: 162 LAQTVDELKQRGLWIFGT-------DMKGHDFRKWDAKGPTALVIGNEGKGISSLLKKKC 214
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTR 154
D + IP G SLN +VAAS++++ GF+ R +
Sbjct: 215 DEMLTIPMI-GHVQSLNASVAASLLIYQ-----GFTSRGK 248
>gi|304390649|ref|ZP_07372602.1| rRNA methylase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304326405|gb|EFL93650.1| rRNA methylase [Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 230
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V + N+ N G++ R+A GV + +VGRR FN G+ + +++ H + D
Sbjct: 83 VAIENVGHDFNTGSIIRTANGLGVRHVHIVGRRRFNRRGAMVTDRYLHLHHHPEVQDLVS 142
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ ++ I G++ A + T + G E GL+ + V I QY G
Sbjct: 143 YAAQQELTIVGMDNFPGAEPLETVTLPSRTLMVFGEESQGLTPAMQNALERLVQITQY-G 201
Query: 126 GTASLNVTVAASIVLHHFGVWA 147
T SLNV AA+I +WA
Sbjct: 202 STRSLNVGHAAAI-----SIWA 218
>gi|46911829|emb|CAG18627.1| putative tRNA methyltransferase [Photobacterium profundum SS9]
Length = 267
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSD 62
V + + K +NV + R+A A G+ ++ V ++ SH G+ + V ++ D
Sbjct: 55 VCMEEVHKPNNVSAIIRTADAVGIHKVHAVWPKENMRVLSHTSAGARNWVELDTHDNMVD 114
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D A+D + K TA +LG E G++A+ D + IP
Sbjct: 115 AITQLKAQGMQILATNLSDTAIDFRDVDYTKPTAIILGGEKNGITAEALAQADQDIIIPM 174
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 175 V-GMVQSLNVSVASALILY 192
>gi|389573531|ref|ZP_10163605.1| RNA methyltransferase, TrmH family, group 3 [Bacillus sp. M 2-6]
gi|388426846|gb|EIL84657.1| RNA methyltransferase, TrmH family, group 3 [Bacillus sp. M 2-6]
Length = 249
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +++ RR A S G+ H+ +
Sbjct: 99 FIILDEIEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVAKVTN 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS A +K + + G + + D Q A ++G+EG G+ E CDF +
Sbjct: 159 LSRALDEMKERGIWVAGTDASAKQ-DYRQFDGTMPLALVIGSEGKGIGRLIKEKCDFLIK 217
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G SLN +VAAS++++
Sbjct: 218 LP-MAGQVTSLNASVAASLLMYE 239
>gi|258655261|ref|YP_003204417.1| tRNA/rRNA methyltransferase SpoU [Nakamurella multipartita DSM
44233]
gi|258558486|gb|ACV81428.1| tRNA/rRNA methyltransferase (SpoU) [Nakamurella multipartita DSM
44233]
Length = 224
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + +VGRR +N G+ + + + H ++
Sbjct: 76 HVAIENFAHDANIGTVVRTANAFAARAVHIVGRRRWNRRGAMVTDRYQHLNHHPDVASLL 135
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ +V V + L G E GLS + V I Q+
Sbjct: 136 AFAGAAGLTVVAVDNLPGSVPVETAELPRDCLLLFGGESAGLSEQARAGAAATVSIAQF- 194
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV VAA I +H +
Sbjct: 195 GSTRSINVGVAAGIAMHAW 213
>gi|114319697|ref|YP_741380.1| tRNA guanosine-2'-O-methyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226091|gb|ABI55890.1| tRNA guanosine-2'-O-methyltransferase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 220
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGR-RDFNAF--GSHGSTSHVNFRHFHSLSD 62
V++ + K HN+ + R+ A GV V R +DF S G+ V L
Sbjct: 22 VLLDQVHKPHNLSAILRTCDAVGVPRAHAVSRHQDFTVHRAASSGTGQWVAVETHADLPA 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A ++ + + +++ AVD Q + K LLG E G+S + + D V IP
Sbjct: 82 AVRAVQGQGMKVYAAHLSEQAVDYRQVDYTKPCCLLLGAEKEGVSEEGAALADGHVIIPM 141
Query: 123 YGGGTASLNVTVAASIVL 140
+G G ASLNV+VAA+++L
Sbjct: 142 FGLG-ASLNVSVAAAVIL 158
>gi|345018553|ref|YP_004820906.1| TrmH family RNA methyltransferase [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033896|gb|AEM79622.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 247
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + RSA AFGV +I+ RR S G+ H+ ++
Sbjct: 99 LILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNI 158
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++ LK + I G ++ + + A ++G+EG G+S + CDF V I
Sbjct: 159 NNTIRGLKERGLWIVGTDVNAGK-SFEELDYDFPLAIVIGSEGKGVSKLVLQNCDFVVKI 217
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G SLN +VAASI+++
Sbjct: 218 PMK-GKINSLNASVAASILIYQ 238
>gi|365851759|ref|ZP_09392179.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
parafarraginis F0439]
gi|363716138|gb|EHL99554.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
parafarraginis F0439]
Length = 257
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
+V++ NI HN+G++ R+A A GV+ +I+ VG A S G+ V +
Sbjct: 107 FVILDNIEDPHNLGSIIRTADAAGVTGVIIPKHRAVGLTATVAKTSAGAIERVPVARVTN 166
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + + G +I+ D Q K + A ++GNEG G+S + D +
Sbjct: 167 LSATIKELKERGVWVFGTDIS--GTDYRQWNAKGAVAVVIGNEGKGISPLLKKQVDEMLT 224
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAASI+ ++ GF+ R
Sbjct: 225 IPMV-GDIQSLNASVAASIL-----IYQGFNSR 251
>gi|359431662|ref|ZP_09222086.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20652]
gi|359439881|ref|ZP_09229811.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20429]
gi|359456475|ref|ZP_09245624.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20495]
gi|392535452|ref|ZP_10282589.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas arctica A
37-1-2]
gi|357921700|dbj|GAA58335.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20652]
gi|358038221|dbj|GAA66060.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20429]
gi|358046463|dbj|GAA81873.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20495]
Length = 228
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFH-SLSD 62
V + ++ K HN+ + RSA A G + + ++ + + G + + H H ++ D
Sbjct: 22 VCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPEKQKWLTNNTSGGSKNWLETHLHRNIDD 81
Query: 63 ARVFLKSKDCDI--CGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A ++ ++ +I ++++AVD + + K TA ++G E G+S K E D + I
Sbjct: 82 AVTAMRERNPEIQILATHLSEDAVDFREVDYTKPTAIIVGQEKTGISEKALEYADQNIII 141
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLNV+VAA+++L
Sbjct: 142 P-MQGMVQSLNVSVAAALIL 160
>gi|220911435|ref|YP_002486744.1| tRNA/rRNA methyltransferase SpoU [Arthrobacter chlorophenolicus A6]
gi|219858313|gb|ACL38655.1| tRNA/rRNA methyltransferase (SpoU) [Arthrobacter chlorophenolicus
A6]
Length = 229
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF E+ ++GRR +N G+ + + + RH ++ D
Sbjct: 82 HVAIENWQHDLNIGTVVRTANAFLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHPTVEDFV 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + I G++I ++V + + + + G EG GL+ + E + I Q+
Sbjct: 142 QWAQGEGLAIIGIDIFPDSVPLETYELPRDCVLVFGQEGPGLTPEVHEAAQATLSIEQF- 200
Query: 125 GGTASLN 131
G T S+N
Sbjct: 201 GSTRSIN 207
>gi|161936340|ref|YP_128429.2| tRNA guanosine-2'-O-methyltransferase [Photobacterium profundum
SS9]
Length = 234
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSD 62
V + + K +NV + R+A A G+ ++ V ++ SH G+ + V ++ D
Sbjct: 22 VCMEEVHKPNNVSAIIRTADAVGIHKVHAVWPKENMRVLSHTSAGARNWVELDTHDNMVD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ I ++D A+D + K TA +LG E G++A+ D + IP
Sbjct: 82 AITQLKAQGMQILATNLSDTAIDFRDVDYTKPTAIILGGEKNGITAEALAQADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|333988993|ref|YP_004521607.1| RNA methyltransferase [Mycobacterium sp. JDM601]
gi|333484961|gb|AEF34353.1| RNA methyltransferase [Mycobacterium sp. JDM601]
Length = 222
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF V + +VGRR +N G+ + + RH ++
Sbjct: 74 HVAIENFEHDANIGSVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQRLRHHDQVAGLL 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ A + Q + G+EG G+S + V I +
Sbjct: 134 EFAAQQGLTVVAVDNVAGAQRLEQTVLPSDCLLVFGSEGPGISDEMRAGAGLLVSIAAF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV VAA IV+H +
Sbjct: 193 GSTRSINVGVAAGIVMHTW 211
>gi|423138072|ref|ZP_17125715.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
nucleatum subsp. animalis F0419]
gi|371958634|gb|EHO76343.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 234
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G N ++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAAGEAN-INYNEEDYPDKVVLVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|260495230|ref|ZP_05815358.1| 23S rRNA methyltransferase [Fusobacterium sp. 3_1_33]
gi|260197287|gb|EEW94806.1| 23S rRNA methyltransferase [Fusobacterium sp. 3_1_33]
Length = 234
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G N ++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAAGEAN-INYNEEDYPDKVVLVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|227510511|ref|ZP_03940560.1| RNA methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227513520|ref|ZP_03943569.1| RNA methyltransferase [Lactobacillus buchneri ATCC 11577]
gi|227524663|ref|ZP_03954712.1| RNA methyltransferase [Lactobacillus hilgardii ATCC 8290]
gi|227083393|gb|EEI18705.1| RNA methyltransferase [Lactobacillus buchneri ATCC 11577]
gi|227088147|gb|EEI23459.1| RNA methyltransferase [Lactobacillus hilgardii ATCC 8290]
gi|227190163|gb|EEI70230.1| RNA methyltransferase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 255
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHF 57
S++++ NI N+GT+ R+A A G++ +I G+ + + GS HV +
Sbjct: 111 SWLMLDNIQDPGNIGTMVRTADAAGMNGVIF-GKGTADIYNPKVVRSMQGSQFHVRL-YS 168
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
L+ + + G E+ D A+ K A ++GNEG G+SA + D
Sbjct: 169 GDLAVWMAAFNKHNVPVYGTELNDQAISYDDVEPTKQFALVMGNEGNGVSADLLDKTDQN 228
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIP G SLNV VA I++ HF
Sbjct: 229 LYIPM-NGEAESLNVAVATGILIFHF 253
>gi|163789140|ref|ZP_02183583.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacteriales bacterium
ALC-1]
gi|159875553|gb|EDP69614.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacteriales bacterium
ALC-1]
Length = 218
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG---SHGSTSHVNFRHFHSLSD 62
V ++ + HN + RS FG+ E+ +V + + + G+ V+ FHS
Sbjct: 35 VATEDVYQLHNASAVMRSCDVFGIQELNIVEEVNSKSIDREIAMGAQKWVDLNRFHSTKS 94
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
LK+K I D+ K + F G E GLS + + D F+ IP
Sbjct: 95 CIDHLKTKGYQIVATTPHAEDCDLIDFDITKKSCFFFGRETEGLSQQVIDEADCFLKIPM 154
Query: 123 YGGGTASLNVTVAASIVLHH 142
G T SLN++V+A+I+L H
Sbjct: 155 V-GFTESLNISVSAAIILQH 173
>gi|146302323|ref|YP_001196914.1| tRNA/rRNA methyltransferase SpoU [Flavobacterium johnsoniae UW101]
gi|146156741|gb|ABQ07595.1| tRNA/rRNA methyltransferase (SpoU) [Flavobacterium johnsoniae
UW101]
Length = 165
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 14 RHNVGTLARSATAFGVSEMILVGR------RDFNAFGSHGSTSHVNFRHFHSLSDARVFL 67
+ N+G+L R + AFGV +I +G+ R N S + HV + ++ +L
Sbjct: 27 QQNIGSLFRISEAFGVENIIFLGKDIPLTPRKINK-TSRSTHLHVPHQIIEETTELTAYL 85
Query: 68 KSKDCDICGVEITDNAVDVTQ--HPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ + +I +EIT N+ + + P K TA L+G+E G+S + +I V+I +G
Sbjct: 86 QENNFEIIALEITSNSKPLKEVLIPKDKKTALLIGSEIAGISEELLKISHQIVHINMFGK 145
Query: 126 GTASLNVTVAASIVLH 141
+S+NV AASI L+
Sbjct: 146 N-SSMNVVQAASIALY 160
>gi|449128545|ref|ZP_21764791.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
SP33]
gi|448940953|gb|EMB21857.1| RNA methyltransferase, TrmH family, group 3 [Treponema denticola
SP33]
Length = 258
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ ++ HN G++ RSA FG+ +I+ + F S G+ + V F +L
Sbjct: 113 VILDSVTDPHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNL 172
Query: 61 SDARVFLKSKDCDICGVEITDNAV-DVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LK + I G + + D+T F K T ++G+EG G+S E CD V
Sbjct: 173 VRTVERLKKEGFWIYGADAGGKPLPDLT---FPKKTGLIMGSEGKGMSRLVEETCDEIVS 229
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP G SLNV+VAA I+L+
Sbjct: 230 IPTK-GKLDSLNVSVAAGILLYEI 252
>gi|392939596|ref|ZP_10305240.1| rRNA methylase, putative, group 3 [Thermoanaerobacter siderophilus
SR4]
gi|392291346|gb|EIV99789.1| rRNA methylase, putative, group 3 [Thermoanaerobacter siderophilus
SR4]
Length = 247
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + RSA AFGV +I+ RR S G+ H+ ++
Sbjct: 99 LILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNI 158
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++ LK + I G ++ + + A ++G+EG G+S + CDF V I
Sbjct: 159 NNTIRGLKERGLWIVGTDVNAGK-SFEELDYDFPLAIVIGSEGKGVSKLVLQNCDFVVKI 217
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G SLN +VAASI+++
Sbjct: 218 PMK-GKINSLNASVAASILIYQ 238
>gi|262273555|ref|ZP_06051369.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Grimontia hollisae CIP
101886]
gi|262222533|gb|EEY73844.1| tRNA (Guanosine18-2'-O-)-methyltransferase [Grimontia hollisae CIP
101886]
Length = 230
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 8/156 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAFG--SHGSTSHVNFRHFHSLS 61
V + + K +N+ + R+A A G+ ++ V ++ G S G+ + V+ +
Sbjct: 22 VCMEEVHKPNNISAIIRTADAVGIHQVHAVWPKNSKMRTLGGTSAGARNWVDVVTHDNTP 81
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
DA LK+K I +++ AVD + + K TA ++G E G+S + + D + IP
Sbjct: 82 DAFAALKAKGMQILVTNLSETAVDFREIDYTKPTAIVMGQEKTGISQQALALADQDIIIP 141
Query: 122 QYGGGTASLNVTVAASIVLHHFGVW---AGFSERTR 154
G SLNV+VA++++L+ AG +RTR
Sbjct: 142 MV-GMVQSLNVSVASALILYEAQRQRQNAGMYQRTR 176
>gi|226327607|ref|ZP_03803125.1| hypothetical protein PROPEN_01478 [Proteus penneri ATCC 35198]
gi|225204133|gb|EEG86487.1| RNA methyltransferase, TrmH family [Proteus penneri ATCC 35198]
Length = 229
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSD 62
+ + + K HNV + R+A A G+ ++ + + + GS S VN +++D
Sbjct: 11 ICLEEVHKSHNVAAVIRTADAVGIPKIHAIWPEEKMRMLVSPAAGSNSWVNVETHPTITD 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A +++ + ++D AVD + + + T ++G E G+S + D + +P
Sbjct: 71 AVGAFRTQGMQVLATHLSDKAVDFREIDYTRPTCIIMGQEKTGISQDAIALADQDIIVPM 130
Query: 123 YGGGTASLNVTVAASIVLHH 142
G SLNV+VA++++L+
Sbjct: 131 M-GMVQSLNVSVASALILYE 149
>gi|377557023|ref|ZP_09786689.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
gastricus PS3]
gi|376166669|gb|EHS85558.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
gastricus PS3]
Length = 251
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ +A HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 102 FLILDELADPHNLGSILRTADAAGVHGIIIPKRRSVGLTAVVAKTSTGAIEHVPVARVTN 161
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L L+ + + G ++ D Q A ++GNEG G+S + CD +
Sbjct: 162 LVQTAKELQQRGVWLFGTDM--QGTDYRQWQANGPVALVIGNEGKGISPLLKKTCDEMLT 219
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++ ++ GF+ R
Sbjct: 220 IPMI-GHVQSLNASVAASLL-----IYQGFNSR 246
>gi|332532739|ref|ZP_08408613.1| tRNA (guanosine18-2'-O-) -methyltransferase [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037766|gb|EGI74216.1| tRNA (guanosine18-2'-O-) -methyltransferase [Pseudoalteromonas
haloplanktis ANT/505]
Length = 228
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFH-SLSD 62
V + ++ K HN+ + RSA A G + + ++ + + G + + H H ++ D
Sbjct: 22 VCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPEKQKWLTNNTSGGSKNWLETHLHRNIDD 81
Query: 63 ARVFLKSKDCDI--CGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A ++ ++ +I ++++AVD + + K TA ++G E G+S K E D + I
Sbjct: 82 AVTAMRERNPEIQILATHLSEDAVDFREVDYTKPTAIIVGQEKTGISEKALEYADQNIII 141
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLNV+VAA+++L
Sbjct: 142 P-MQGMVQSLNVSVAAALIL 160
>gi|284929527|ref|YP_003422049.1| rRNA methylase [cyanobacterium UCYN-A]
gi|284809971|gb|ADB95668.1| rRNA methylase [cyanobacterium UCYN-A]
Length = 218
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-DFNAFG--SHGSTSHVNFRHFHSLSD 62
V++ ++ K HN+ + R+ A G+ ++ +V + + F S GS V + S+ D
Sbjct: 22 VLIEDVHKPHNLSAIIRTCDAVGILDLHVVNQNGKYPTFSKVSQGSEKWVFITTYISIDD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK + I + A+D + + A LLG E G+S + ++ D + IP
Sbjct: 82 AINALKRRKFKIYAAHFSKTAIDYRNVNYTEPVAILLGAEKWGVSKEAAQLVDGHITIPM 141
Query: 123 YGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 142 L-GMVQSLNVSVAAAVIL 158
>gi|295106719|emb|CBL04262.1| rRNA methylase, putative, group 3 [Gordonibacter pamelaeae
7-10-1-b]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR----DFNAF-GSHGSTSHVNFRHFHSL 60
V++ ++ N+G +ARSA A G +++ +R D + + S G+ +H+ +L
Sbjct: 103 VILDHLTDAGNLGAIARSAEAVGACGLVIPNKRSAKVDASTYKSSAGAIAHLPVAQVPNL 162
Query: 61 SDARVFLKSKDCDICGV-EITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LK + + G E TD+ + + K A ++GNE GLS E CDF V
Sbjct: 163 VQVMARLKERGFWVAGASEQTDDVI--WRSNLKGKIALVMGNEAEGLSRVVKESCDFLVK 220
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+PQ G ASLNV A++ ++ +
Sbjct: 221 LPQM-GEVASLNVAQASTACMYEW 243
>gi|386822286|ref|ZP_10109501.1| rRNA methylase [Joostella marina DSM 19592]
gi|386423532|gb|EIJ37363.1| rRNA methylase [Joostella marina DSM 19592]
Length = 173
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 13/145 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG-------RRDFNAFGSHGSTSHVNFRHFH 58
++ +I N+G + R A AFGV ++I VG R + A +H + V F H
Sbjct: 25 IICDHITSAANIGAIFRLADAFGVEKVIFVGNEPVFTRRMEKTARATHKT---VPFEHLT 81
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPF--KKSTAFLLGNEGMGLSAKECEICDF 116
+D FLK + I +EIT+N+ + K TA ++GNE G+S I +
Sbjct: 82 EENDCIEFLKKEKYTIIALEITNNSTPINNLKISNKNKTAIIIGNENYGVSKNLLSIANH 141
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
+I +G +S+N+ A +I L+
Sbjct: 142 TTHIEMFGKN-SSMNLAQATAICLY 165
>gi|444305423|ref|ZP_21141205.1| tRNA/rRNA methyltransferase SpoU [Arthrobacter sp. SJCon]
gi|443482176|gb|ELT45089.1| tRNA/rRNA methyltransferase SpoU [Arthrobacter sp. SJCon]
Length = 224
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF E+ ++GRR +N G+ + + + RH S+ D
Sbjct: 77 HVAIENWQHDLNIGTVVRTANAFLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHPSVEDFV 136
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + I GV+I ++V + + + + G EG GL+ + + + I Q+
Sbjct: 137 AWAQGEGLAIIGVDIFPDSVPLETYDLPRDCVLVFGQEGPGLTPEVHTAAEATLSIEQF- 195
Query: 125 GGTASLN 131
G T S+N
Sbjct: 196 GSTRSIN 202
>gi|255532027|ref|YP_003092399.1| tRNA/rRNA methyltransferase SpoU [Pedobacter heparinus DSM 2366]
gi|255345011|gb|ACU04337.1| tRNA/rRNA methyltransferase (SpoU) [Pedobacter heparinus DSM 2366]
Length = 176
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
VV+ N+ HN+G++ R+A F + ++ L G R+ + G+T V + HF +
Sbjct: 27 VVLDNVRSMHNIGSVFRTADGFAIEKLYLCGITARPPHREIEK-TALGATQSVAWAHFET 85
Query: 60 LSDARVFLKSKDCDICGVEIT--DNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
DA LK+ I G+E ++ + + K A + GNE G+S + D
Sbjct: 86 TVDAIASLKADGYHIIGIEQAAGSTMLNTYKPTYSKKYALIFGNEVNGVSDEVMAQIDEC 145
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ+ G S N+ ++A IVL F
Sbjct: 146 IEIPQF-GTKHSFNIVISAGIVLWDF 170
>gi|187935194|ref|YP_001884456.1| TrmH family RNA methyltransferase [Clostridium botulinum B str.
Eklund 17B]
gi|187723347|gb|ACD24568.1| RNA methyltransferase, TrmH family, group 3 [Clostridium botulinum
B str. Eklund 17B]
Length = 286
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
V++ + HN+G++ R+A FGV +I+ RR + S G+ HV +L
Sbjct: 140 VILDEVEDPHNLGSIIRTAELFGVHGIIIPKRRSASVTTMVYKSSVGAIEHVKVARVTNL 199
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK K + G +I Q F + A ++GNEG G+S + CD + I
Sbjct: 200 NSVIDELKEKGIWVYGTDIRAEEYSY-QTDFGGACAIIIGNEGKGISKLTLKKCDKLIKI 258
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLN +VA I+++
Sbjct: 259 PMV-GKINSLNASVAGGIIMYEV 280
>gi|326391116|ref|ZP_08212662.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
ethanolicus JW 200]
gi|325992815|gb|EGD51261.1| RNA methyltransferase, TrmH family, group 3 [Thermoanaerobacter
ethanolicus JW 200]
Length = 247
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + RSA AFGV +I+ RR S G+ H+ ++
Sbjct: 99 LILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNI 158
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++ LK + I G ++ + + A ++G+EG G+S + CDF V I
Sbjct: 159 NNTIRGLKERGLWIVGTDVNAGK-SFEELDYDFPLAIVIGSEGKGVSKLVLQNCDFVVKI 217
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P G SLN +VAASI+++
Sbjct: 218 PMK-GKINSLNASVAASILIYQ 238
>gi|428177819|gb|EKX46697.1| hypothetical protein GUITHDRAFT_86637 [Guillardia theta CCMP2712]
Length = 420
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTS-----HVNFRHFHSL 60
+V+ N+ HNVG++ R+A GV +++ G G T+ +V H S
Sbjct: 272 LVLDNLRSAHNVGSIIRTAETAGVEKVVACGITPHPPNGKVLKTALRSADYVEVEHEDST 331
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+A L S++ + +E T + T F K A ++GNE +G+S + + C+ + I
Sbjct: 332 LNAVRKLLSRNYSVYALETTSQSRAYTLVNFSKPCALIVGNELLGISPEVLQECNQLIEI 391
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P YG S+NV A +VL+
Sbjct: 392 PMYGFKN-SMNVACACPVVLYE 412
>gi|408670683|ref|YP_006870754.1| spoU protein [Borrelia garinii NMJW1]
gi|407240505|gb|AFT83388.1| spoU protein [Borrelia garinii NMJW1]
Length = 218
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + N R+ G+S++ ++ +R+ N + GS+ +N +++ A
Sbjct: 38 VLEDIFQPQNASATIRTGEILGLSDVHIISKRNKCTLNPDVTLGSSQWINLNRYNNTKFA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I + + ++++ P A G E GLS + E D ++ IP +
Sbjct: 98 LDRLKSDGYSIVATSLDEQSINLEDFPINNKMAIFFGTELTGLSEEAFEAADLYLKIPMH 157
Query: 124 GGGTASLNVTVAASIVLHHFGV 145
G T S N++VA +IV++ +
Sbjct: 158 -GFTQSYNISVAVAIVMYSLSI 178
>gi|404450319|ref|ZP_11015303.1| rRNA methylase [Indibacter alkaliphilus LW1]
gi|403764055|gb|EJZ24971.1| rRNA methylase [Indibacter alkaliphilus LW1]
Length = 178
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+V+ NI +NVG+ R++ AF + ++IL G RD + G+T V++ +
Sbjct: 27 IVLDNIRSLNNVGSAFRTSDAFLLEKIILCGITGTPPHRDIQK-TALGATESVDWEYVED 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQ-HPFK-KSTAFLLGNEGMGLSAKECEICDFF 117
+ A LK ICG+E + +V + + +P K K A + GNE G+ E CD
Sbjct: 86 TARAVEGLKEAGYTICGLEQVERSVKLHEFNPEKNKKYALVFGNEVFGVEDHVLEKCDQV 145
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ G SLN++V I L F
Sbjct: 146 LEIPQL-GTKHSLNISVTMGITLWDF 170
>gi|374298147|ref|YP_005048338.1| rRNA methylase, putative, group 3 [Clostridium clariflavum DSM
19732]
gi|359827641|gb|AEV70414.1| rRNA methylase, putative, group 3 [Clostridium clariflavum DSM
19732]
Length = 275
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N+G++ R+A A G +++ RR + S G+ +V +L
Sbjct: 129 ILLDGITDPQNLGSILRTADAVGAHGVVIPKRRAIGLTAAVSKASAGAIEYVPVARVTNL 188
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S +LK ++ I G +++ + K A ++G+EG G+S E CDF V I
Sbjct: 189 SQTIEYLKEQNLWIVGTDLSGEK-SFFEADLKGPVALVIGSEGEGMSRLVSEKCDFIVNI 247
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G +SLN VA +IV++
Sbjct: 248 PMK-GKISSLNAAVAGAIVMYEV 269
>gi|340616055|ref|YP_004734508.1| tRNA guanosine-2'-O-methyltransferase [Zobellia galactanivorans]
gi|339730852|emb|CAZ94116.1| tRNA guanosine-2'-O-methyltransferase [Zobellia galactanivorans]
Length = 218
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V + ++ + HN + RS FG+ E ++ G+R + + G+ V+ + S +
Sbjct: 35 VAIEDVYQLHNTSAVIRSCEVFGIQEAHVIESRYGKR-LDDKIAMGAQQWVDVHRYKSTN 93
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+ LKS + +++ + + TAFL G E GLS + E D F+ IP
Sbjct: 94 ECIQRLKSDGYKVIATTPHNDSRFLEDFEIEGKTAFLFGTERTGLSQEAMEQSDGFLKIP 153
Query: 122 QYGGGTASLNVTVAASIVLHHFGV 145
G T SLN++V+A+I+L H V
Sbjct: 154 ML-GFTESLNISVSAAIILQHLAV 176
>gi|323339372|ref|ZP_08079657.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Lactobacillus
ruminis ATCC 25644]
gi|417972450|ref|ZP_12613351.1| tRNA/rRNA methyltransferase [Lactobacillus ruminis ATCC 25644]
gi|323093195|gb|EFZ35782.1| 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [Lactobacillus
ruminis ATCC 25644]
gi|346331170|gb|EGX99388.1| tRNA/rRNA methyltransferase [Lactobacillus ruminis ATCC 25644]
Length = 248
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ +V +
Sbjct: 102 FLILDGIEDPHNLGSILRTADAAGVHGIIIPKRRAVQLTSTVAKTSTGAVEYVPVCRVTN 161
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK++ I G ++ D K TA ++GNEG G+S+ + CD +
Sbjct: 162 LAQTVDELKNRGLWIFGTDMKGQ--DFRNWDAKGPTALVIGNEGKGISSLLKKKCDEMLT 219
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTR 154
IP G SLN +VAAS++++ GF+ R +
Sbjct: 220 IPMI-GHVQSLNASVAASLLIYQ-----GFTSRGK 248
>gi|383819806|ref|ZP_09975071.1| rRNA methylase [Mycobacterium phlei RIVM601174]
gi|383336115|gb|EID14522.1| rRNA methylase [Mycobacterium phlei RIVM601174]
Length = 214
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+G + R+A AF V + +VGRR +N G+ + + RH + +D
Sbjct: 66 HIAIENFVNDANIGAVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQRLRHHDTTADLL 125
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ A + + + G EG G++ V I Q+
Sbjct: 126 AFAAGAGLTVVAVDNVPGAERIETTELPRDCLMIFGQEGPGITEDARNGAALVVSIAQF- 184
Query: 125 GGTASLNVTVAASIVLHHFGVW 146
G T S+N VAA I +H VW
Sbjct: 185 GSTRSINAGVAAGIAMH---VW 203
>gi|374709177|ref|ZP_09713611.1| tRNA/rRNA methyltransferase [Sporolactobacillus inulinus CASD]
Length = 245
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ N+ HN+G++ R+A A G +I+ RR A S G+ +V +
Sbjct: 96 FMMLDNVEDPHNLGSILRTADASGCHGIIIPKRRSVGLTSVVAKASTGAIEYVPVARVAN 155
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + G D + D F ++GNEG G+S + CDF +
Sbjct: 156 LASTIDALKKQGVWFAGTA-ADGSEDYRSADFTMPLCLVIGNEGAGMSQLIRKKCDFLIR 214
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAAS++++
Sbjct: 215 LPMKGKVT-SLNASVAASLLMYE 236
>gi|315657840|ref|ZP_07910720.1| rRNA methylase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
gi|315491637|gb|EFU81248.1| rRNA methylase [Mobiluncus curtisii subsp. holmesii ATCC 35242]
Length = 230
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 6/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V + N+ N G++ R+A GV + +VGRR FN G+ + +++ H + D
Sbjct: 83 VAIENVGHDFNTGSIIRTANGLGVRHVHIVGRRRFNRRGAMVTDRYLHLHHHPEVQDLVS 142
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
+ ++ I G++ A + T + G E GL+ + V I QY G
Sbjct: 143 YAAQQELTIVGMDNFSGAEPLETVTLPSRTLMVFGEESQGLTPAMQNALERLVQITQY-G 201
Query: 126 GTASLNVTVAASIVLHHFGVWA 147
T SLNV AA+I +WA
Sbjct: 202 STRSLNVGHAAAI-----SIWA 218
>gi|379012698|ref|YP_005270510.1| putative rRNA methyltransferase [Acetobacterium woodii DSM 1030]
gi|375303487|gb|AFA49621.1| putative rRNA methyltransferase [Acetobacterium woodii DSM 1030]
Length = 341
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD-----FNAFGSHGSTSHVNFRHFHSL 60
V++ ++ HN+G + RSA G +I+ RR + S G+ SH ++
Sbjct: 196 VILDHLTDPHNLGAIVRSANLCGADGVIIPNRRSASLTAVSVKASSGAISHTPIVKVTNI 255
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S LK KD I ++ +N + +K + A ++GNEG G+SA + CDF V I
Sbjct: 256 SQTIEELKKKDFWIMATDMGENPY--YKADYKGALAIVIGNEGTGISANIKKQCDFSVAI 313
Query: 121 PQYG 124
P YG
Sbjct: 314 PTYG 317
>gi|319949900|ref|ZP_08023903.1| putative RNA methyltransferase [Dietzia cinnamea P4]
gi|319436438|gb|EFV91555.1| putative RNA methyltransferase [Dietzia cinnamea P4]
Length = 227
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH +S
Sbjct: 83 HVAIENFGHDANIGTVVRTANAFLAAEVHIVGRRRWNRRGAMVTDRYQHLRHHDDVSALM 142
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ S+ + V+ A + + L G EG G+S V I Q+
Sbjct: 143 EWAASEGLPVVAVDNLPGAEPLEAVSLPRECVLLFGQEGPGVSDDARLRAARTVSIAQF- 201
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 202 GSTRSINAGVAAGIAMHAW 220
>gi|374308772|ref|YP_005055203.1| TrmH family RNA methyltransferase [Filifactor alocis ATCC 35896]
gi|291167104|gb|EFE29150.1| RNA methyltransferase, TrmH family, group 3 [Filifactor alocis ATCC
35896]
Length = 242
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRD--FNAF---GSHGSTSHVNFRHFHSL 60
+++ I HN+G L RSA GV +IL RR NA S G+ S++ ++
Sbjct: 96 LILDEIEDPHNLGALIRSAEGAGVDGVILPKRRSATVNATVEKTSAGAVSYMKVARVTNI 155
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S LK ++ + G+++ + + TQ+ + + A ++GNEG G+ + CD + I
Sbjct: 156 SQTIELLKKENYWVYGLDM--DGTEYTQNDWSGNIAIVVGNEGKGMGRLVRQHCDKILSI 213
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLN +VA S++L
Sbjct: 214 P-MKGQIQSLNASVAGSVIL 232
>gi|256846015|ref|ZP_05551473.1| 23S rRNA methyltransferase [Fusobacterium sp. 3_1_36A2]
gi|256719574|gb|EEU33129.1| 23S rRNA methyltransferase [Fusobacterium sp. 3_1_36A2]
Length = 234
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G + +++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAA-GEASINYNEENYSNKVILVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|289765481|ref|ZP_06524859.1| 23S rRNA methyltransferase [Fusobacterium sp. D11]
gi|289717036|gb|EFD81048.1| 23S rRNA methyltransferase [Fusobacterium sp. D11]
Length = 234
Score = 60.8 bits (146), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G + +++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAA-GEASINYNEEDYANKVILVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|375147657|ref|YP_005010098.1| tRNA/rRNA methyltransferase SpoU [Niastella koreensis GR20-10]
gi|361061703|gb|AEW00695.1| tRNA/rRNA methyltransferase (SpoU) [Niastella koreensis GR20-10]
Length = 170
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 16/146 (10%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
VV+ NI HNVG++ R+A AF + + L G RD + + G+T V +++ +
Sbjct: 22 VVLDNIRSMHNVGSVFRTADAFLLRGIYLCGYTPQPPHRDIHK-TALGATETVEWKYAET 80
Query: 60 LSDARVFLKSKDCDICGVEITDNAV-----DVTQHPFKKSTAFLLGNEGMGLSAKECEIC 114
+A LK+ + +E +++ ++ QHP A + GNE G+ + ++C
Sbjct: 81 TVEAVQRLKADGYQVFAIEQVQHSIPLHQFELNQHP---QVAVVFGNEVSGVDQEVIKLC 137
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVL 140
D + IPQ G SLN++VAA IVL
Sbjct: 138 DGCIEIPQL-GMKHSLNISVAAGIVL 162
>gi|251779338|ref|ZP_04822258.1| RNA methyltransferase, TrmH family, group 3 [Clostridium botulinum
E1 str. 'BoNT E Beluga']
gi|243083653|gb|EES49543.1| RNA methyltransferase, TrmH family, group 3 [Clostridium botulinum
E1 str. 'BoNT E Beluga']
Length = 290
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
V++ + HN+G++ R+A FGV +I+ RR + S G+ HV +L
Sbjct: 144 VILDEVEDPHNLGSIIRTAELFGVHGIIIPKRRSASVTTMVYKSSVGAIEHVKVARVTNL 203
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK K + G +I Q F A ++GNEG G+S + CD + I
Sbjct: 204 NSVIDELKEKGIWVYGTDIRAEEYSY-QTDFGGPCAIIIGNEGKGISKLTLKKCDKLIKI 262
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLN +VA I+++
Sbjct: 263 PMV-GKINSLNASVAGGIIMYEV 284
>gi|72162848|ref|YP_290505.1| tRNA/rRNA methyltransferase [Thermobifida fusca YX]
gi|71916580|gb|AAZ56482.1| tRNA/rRNA methyltransferase [Thermobifida fusca YX]
Length = 227
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF + +VGRR +N G+ + + + H +
Sbjct: 80 HVAIENWEHDFNIGSVVRTANAFAARAVHIVGRRRWNRRGAMVTDRYQHIHHHPDTASLV 139
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ D + G++ +V + +P + + G EG GLS + ++C + I Q+
Sbjct: 140 AWAEAHDLPLIGIDNLPGSVPLETYPLPRECVLVFGQEGPGLSEEVRKVCVSVLSIAQF- 198
Query: 125 GGTASLN 131
G T S+N
Sbjct: 199 GSTRSIN 205
>gi|229493085|ref|ZP_04386880.1| spou rrna methylase family protein [Rhodococcus erythropolis SK121]
gi|229320115|gb|EEN85941.1| spou rrna methylase family protein [Rhodococcus erythropolis SK121]
Length = 230
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H +S+
Sbjct: 82 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHIVHHADISELV 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + I V+ T +V + + L G EG G++ E+ V I Q+
Sbjct: 142 EYARENSLTIVAVDNTPGSVPLETASLPRECILLFGQEGPGVTDHAKEVASMTVSIAQF- 200
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 201 GSTRSINAGVAAGIAMHAW 219
>gi|162382313|ref|YP_659936.2| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas atlantica
T6c]
Length = 250
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
V + + K HNV + RS A G++ + + + + GS V S+ DA
Sbjct: 22 VCLEQVHKPHNVSAVLRSCDAVGINRIHGVWDQKTKIRKGTAMGSEHWVKTEMHTSIGDA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK ++ + ++D++VD + + TA +LG E G + + + D + IP
Sbjct: 82 VSVLKQQNMQVLVTHLSDDSVDFRDIDYTQPTAIILGQEKHGATEEAIAVADKNIVIPMV 141
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 142 -GMVQSLNVSVAAAVVLY 158
>gi|296131814|ref|YP_003639061.1| TrmH family RNA methyltransferase [Thermincola potens JR]
gi|296030392|gb|ADG81160.1| RNA methyltransferase, TrmH family, group 3 [Thermincola potens JR]
Length = 244
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 7/134 (5%)
Query: 15 HNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSLSDARVFLKS 69
HN+G + R+A A G+ +++ RR S G+ +V+ +L+ +LK
Sbjct: 104 HNLGAIIRTADAVGIHGVVIPRRRAVGITPAVVKASAGAVEYVSVCRVTNLAQTIEYLKE 163
Query: 70 KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTAS 129
K C + G + ++ Q + A ++G+EG G+S E CDF V +P G S
Sbjct: 164 KGCWVVGADAAAPQ-NLWQADLQGPLALVIGSEGKGISRLVREKCDFLVRLPMQ-GKIGS 221
Query: 130 LNVTVAASIVLHHF 143
LN +VAA+++ +
Sbjct: 222 LNASVAAAVLCYEV 235
>gi|392542316|ref|ZP_10289453.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas piscicida
JCM 20779]
Length = 232
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 15/214 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNF--RHFHSLSD- 62
V + + K HN+ + R+A A G + V +D ++ S N+ H H D
Sbjct: 22 VCLDEVHKHHNLSAIVRTADAVGCHHVHAVWPQDQRRLTNNTSGGSKNWVETHMHEHIDQ 81
Query: 63 --ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A + ++ + ++D+AVD + + K TA ++G E +G+S + E D + I
Sbjct: 82 AVATIREQNPGVQLLATNLSDSAVDFREIDYTKPTAIIVGQERLGISERALEHADQHIVI 141
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRD-GNKYVVAERSARQVRRSFCAEKPE 179
P G SLNV+VAA+++L+ ++R RD Y + V+ E
Sbjct: 142 P-MQGMVQSLNVSVAAALILYE-------AQRQRDAAGLYKRTDMMDPVVKHKLLFEGCH 193
Query: 180 SIIEMRRSRRENASNGFFDGSGNDVSSSSLLDAL 213
II R R + D G V+ + D L
Sbjct: 194 PIIAT-RCREKELPYPALDEHGEIVADDAFWDIL 226
>gi|188588931|ref|YP_001919654.1| TrmH family RNA methyltransferase [Clostridium botulinum E3 str.
Alaska E43]
gi|188499212|gb|ACD52348.1| RNA methyltransferase, TrmH family, group 3 [Clostridium botulinum
E3 str. Alaska E43]
Length = 290
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
V++ + HN+G++ R+A FGV +I+ RR + S G+ HV +L
Sbjct: 144 VILDEVEDPHNLGSIIRTAELFGVHGIIIPKRRSASVTTMVYKSSVGAIEHVKVARVTNL 203
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK K + G +I Q F A ++GNEG G+S + CD + I
Sbjct: 204 NSVIDELKEKGIWVYGTDIRAEEYSY-QTDFGGPCAIIIGNEGKGISKLTLKKCDKLIKI 262
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLN +VA I+++
Sbjct: 263 PMV-GKINSLNASVAGGIIMYEV 284
>gi|109698962|gb|ABG38882.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas
atlantica T6c]
Length = 256
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDA 63
V + + K HNV + RS A G++ + + + + GS V S+ DA
Sbjct: 28 VCLEQVHKPHNVSAVLRSCDAVGINRIHGVWDQKTKIRKGTAMGSEHWVKTEMHTSIGDA 87
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK ++ + ++D++VD + + TA +LG E G + + + D + IP
Sbjct: 88 VSVLKQQNMQVLVTHLSDDSVDFRDIDYTQPTAIILGQEKHGATEEAIAVADKNIVIPMV 147
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 148 -GMVQSLNVSVAAAVVLY 164
>gi|386853460|ref|YP_006202745.1| SpoU protein [Borrelia garinii BgVir]
gi|365193494|gb|AEW68392.1| SpoU [Borrelia garinii BgVir]
Length = 218
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + N R+ G+S++ ++ +R+ N + GS+ +N +++ A
Sbjct: 38 VLEDIFQPQNASATIRTGEILGLSDVHIISKRNKCTLNPDVTLGSSQWINLNRYNNTKFA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I + + ++++ P A G E GLS + E D ++ IP +
Sbjct: 98 LDRLKSDGYSIVATSLDEQSINLEDFPINNKMAIFFGTELTGLSEEAFEAADLYLKIPMH 157
Query: 124 GGGTASLNVTVAASIVLHHFGV 145
G T S N++VA +IV++ +
Sbjct: 158 -GFTQSYNISVAVAIVMYSLSI 178
>gi|294783389|ref|ZP_06748713.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
1_1_41FAA]
gi|294480267|gb|EFG28044.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
1_1_41FAA]
Length = 234
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
+++ I N G + RSA F V ++IL+ R+ S G+ +VN +
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKV-DLILIPERNSVRINETVVKTSTGAIEYVNISKVTN 149
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LSD LK D + G + +++ + + +LGNEG G+ K E CD V
Sbjct: 150 LSDTINKLKKLDYWVYGAA-GEASINYNEEDYPNKIVLVLGNEGSGIRKKVREHCDKLVK 208
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP + G SLNV+VA+ I+L
Sbjct: 209 IPMF-GQINSLNVSVASGILLSRI 231
>gi|406965346|gb|EKD90982.1| hypothetical protein ACD_30C00054G0029 [uncultured bacterium]
Length = 183
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 8/145 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNA-----FGSHGSTSHVNFRHFHS 59
Y+++ N+ +N+G + R A A ++ L G + S +T V++ +F
Sbjct: 33 YIILDNVLDTYNIGAIFRLADAVAAKKIFLCGGTEAPPNPRIKKASINTTEVVDWEYFDK 92
Query: 60 LSDARVFLKSK--DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
DA L+ K + I VE +++ Q+ + A + G+E G+S + +CD
Sbjct: 93 TEDAISELREKISNISIIAVEQQKDSIPYDQYNYSLPIALVAGHETEGISKEVLNLCDGV 152
Query: 118 VYIPQYGGGTASLNVTVAASIVLHH 142
V +P YG SLNV V+ IVL+
Sbjct: 153 VELPMYGVNI-SLNVMVSLGIVLYQ 176
>gi|385810384|ref|YP_005846780.1| tRNA methyltransferase [Ignavibacterium album JCM 16511]
gi|383802432|gb|AFH49512.1| tRNA methyltransferase [Ignavibacterium album JCM 16511]
Length = 196
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV-GRRDFNAFGSHGSTS---HVNFRHFHSLS 61
VV+ NI HNV + R+ A G+ ++ LV + F G S S V + F S+
Sbjct: 26 VVLENIHDPHNVSAIFRTCDAVGIPKVSLVYTKEKFPKIGKKSSASAFKWVEKQKFTSID 85
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
L+ I I ++ + + F A +LGNE G+S K ++ D + IP
Sbjct: 86 SCYSELRKNGFKIYASSICSDSKSIYEIDFTGKVAIVLGNEHRGVSEKADKLADERIMIP 145
Query: 122 QYGGGTASLNVTVAASIVLHH 142
+ G SLNV+VAA+I+L+
Sbjct: 146 MF-GMVQSLNVSVAAAIILYE 165
>gi|311740469|ref|ZP_07714297.1| TrmH family RNA methyltransferase [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304515|gb|EFQ80590.1| TrmH family RNA methyltransferase [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 237
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + H S+
Sbjct: 89 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLMHHESVEKLI 148
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + ++ T V + + + L G EG G++ + I Q+
Sbjct: 149 AWAAEEGLTVVAIDNTPGCVPLETAELPERSLLLFGQEGPGVTQAAQDAAVMTCSIAQF- 207
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 208 GSTRSINAGVAAGIAMHAW 226
>gi|34763276|ref|ZP_00144235.1| 23S rRNA methyltransferase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887047|gb|EAA24159.1| 23S rRNA methyltransferase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 234
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G + +++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAA-GEASINYNEENYSNKIILVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|392389454|ref|YP_006426057.1| rRNA methylase [Ornithobacterium rhinotracheale DSM 15997]
gi|390520532|gb|AFL96263.1| rRNA methylase [Ornithobacterium rhinotracheale DSM 15997]
Length = 243
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMIL-------VGRRDFNAFGSHGSTSHVNFR 55
E + + N+ N+GT+ R A FG+ ++ + A S GS S V R
Sbjct: 96 ELILALDNVQDPGNLGTILRLADWFGIKNIVCNSDTVDCYNPKTIQA--SMGSLSRV--R 151
Query: 56 HFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
F++ D + FL + I G + N ++ +LGNEG G+S + ++C
Sbjct: 152 VFYT--DLKEFLAQQKNPIYGTFM--NGENIYNQNLAPKGIIVLGNEGKGISPEIEKLCT 207
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ G T SLNV +AASIV++ F
Sbjct: 208 QRISIPQVGNSTESLNVAMAASIVINEF 235
>gi|294784858|ref|ZP_06750146.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
3_1_27]
gi|421144557|ref|ZP_15604468.1| 23S rRNA methyltransferase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|294486572|gb|EFG33934.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
3_1_27]
gi|395489024|gb|EJG09868.1| 23S rRNA methyltransferase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 234
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G + +++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAA-GEASINYNEENYSNKIILVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|90412684|ref|ZP_01220685.1| putative tRNA methyltransferase [Photobacterium profundum 3TCK]
gi|90326259|gb|EAS42678.1| putative tRNA methyltransferase [Photobacterium profundum 3TCK]
Length = 234
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSD 62
V + + K +NV + R+A A GV ++ V ++ SH G+ + V ++ D
Sbjct: 22 VCMEEVHKPNNVSAIIRTADAVGVHKVHAVWPKENMRVLSHTSAGARNWVELDTHDNMVD 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK++ + ++D A+D + K TA + G E G++A+ + D + IP
Sbjct: 82 AITHLKAQGMQVLATNLSDTAIDFRDVDYTKPTAIIFGGEKNGITAEALAMADQDIIIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 V-GMVQSLNVSVASALILY 159
>gi|255325551|ref|ZP_05366651.1| spou rrna methylase family protein [Corynebacterium
tuberculostearicum SK141]
gi|255297339|gb|EET76656.1| spou rrna methylase family protein [Corynebacterium
tuberculostearicum SK141]
Length = 232
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF V + +VGRR +N G+ + + + H S+
Sbjct: 84 HIAIENFENDANIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLMHHESVEKLI 143
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + ++ T V + + + L G EG G++ + I Q+
Sbjct: 144 AWAAEEGLTVVAIDNTPGCVPLETAELPERSLLLFGQEGPGVTQAAQDAAVMTCSIAQF- 202
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 203 GSTRSINAGVAAGIAMHAW 221
>gi|88861117|ref|ZP_01135751.1| putative tRNA methyltransferase (tRNA mG18-2'-O-methyltransferase)
[Pseudoalteromonas tunicata D2]
gi|88816839|gb|EAR26660.1| putative tRNA methyltransferase (tRNA mG18-2'-O-methyltransferase)
[Pseudoalteromonas tunicata D2]
Length = 229
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILV---GRRDFNAFGSHGSTSHVNFRHF 57
I+ + + + K HN+ + RSA A G+ + V G + + S GS +
Sbjct: 17 QIDLTLCLDEVHKHHNLSAIVRSADAVGIHHIHSVWPEGGKRLTSSTSGGSKNWTENHIH 76
Query: 58 HSLSDARVFLKSK--DCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
H++ DA ++S+ + I ++ AVD + + TA +LG E G+S + + D
Sbjct: 77 HTVEDAIATIRSRTPNVQILATHFSEQAVDFRAIDYTRPTAIILGQEKFGISDQALALAD 136
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLH 141
+ IP G SLNV+VAA+I+L+
Sbjct: 137 QHIIIPMV-GMVQSLNVSVAAAIILY 161
>gi|182420073|ref|ZP_02951307.1| RNA methyltransferase, TrmH family, group 3 [Clostridium butyricum
5521]
gi|237666689|ref|ZP_04526674.1| RNA methyltransferase, TrmH family, group 3 [Clostridium butyricum
E4 str. BoNT E BL5262]
gi|182376110|gb|EDT73697.1| RNA methyltransferase, TrmH family, group 3 [Clostridium butyricum
5521]
gi|237657888|gb|EEP55443.1| RNA methyltransferase, TrmH family, group 3 [Clostridium butyricum
E4 str. BoNT E BL5262]
Length = 277
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ + HN+G++AR+A FGV +I+ RR + S G+ HV +++
Sbjct: 131 VILDEVEDPHNLGSIARTAELFGVHGIIIPKRRSASVTATVYKSSVGAIEHVKVAKVNNI 190
Query: 61 SDARVFLKSKDCDICGVEIT----DNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ LK K I G +I + VD + A ++GNEG G+S + CD
Sbjct: 191 NSTIEELKEKGVWIYGADIRAEEYSHEVD-----YSGPCALVIGNEGRGMSKLTVQKCDK 245
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
+ IP G SLN +VA I+++
Sbjct: 246 LIKIPMV-GKINSLNASVAGGIMMYEV 271
>gi|15828775|ref|NP_326135.1| tRNA/rRNA methyltransferase [Mycoplasma pulmonis UAB CTIP]
gi|14089718|emb|CAC13477.1| TRNA/RRNA METHYLTRANSFERASE [Mycoplasma pulmonis]
Length = 250
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF---GSHGSTSHVNFRHFHSLSDAR 64
++N+ N+GTL RSA +F +I +N S G+ +NF +
Sbjct: 106 LNNLQDPTNIGTLLRSALSFNFKNIIYDNLDIYNPKIIRASQGAIFALNFFKSKNHQKTL 165
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+L+ K+ +I G + ++ ++ Q+ F K +LGNEG+G+ + + D V +P
Sbjct: 166 KYLQEKNYEIIGTFLHSDSTNLYQNSFDKKIVLILGNEGLGIEKEILTLIDKNVIVP--- 222
Query: 125 GGTASLNVTVAASIVLHH 142
SLNV +A SI++ +
Sbjct: 223 INFESLNVAIAGSIIMSY 240
>gi|422933705|ref|ZP_16966480.1| tRNA-guanosine methyltransferase [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339891397|gb|EGQ80382.1| tRNA-guanosine methyltransferase [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 234
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G N ++ + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAAGEAN-INYNEEDYANKVILVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|356498188|ref|XP_003517935.1| PREDICTED: uncharacterized protein LOC100797732 [Glycine max]
Length = 126
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 31 EMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHP 90
M+ G N S H + ++ ++ + +C IC I D
Sbjct: 9 PMVPTGEPSSNVGPSSKKPKHFEIKKWNVVTLWAWDIVVDNCAICWNHIMDLCCYWAMVA 68
Query: 91 FKKSTAFL-LGNEGMGLSAKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHFG 144
S L N G GLS KE EICDFF GGG ASLNVTV A IV+HHFG
Sbjct: 69 AIVSVILLSKANGGTGLSPKEIEICDFF------GGGIASLNVTVVAFIVVHHFG 117
>gi|384160397|ref|YP_005542470.1| RNA methylase [Bacillus amyloliquefaciens TA208]
gi|328554485|gb|AEB24977.1| RNA methylase [Bacillus amyloliquefaciens TA208]
Length = 248
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGST-SHVNFRHFHSL 60
++ +++ + N+GT+ R+A A G+ ++L D A G T HFH
Sbjct: 103 LKRLLLIDAVQDPGNLGTMIRTADAAGIDAVVL---GDGTADPYSGKTLRSAQGSHFHIP 159
Query: 61 SDARVF------LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEIC 114
R LKS+ I G + + AV + P ++S A ++GNEG G+ A +
Sbjct: 160 ILKRPLDEFIDELKSQGVAIYGTALENGAVYQSVKP-EESFALIVGNEGAGVDAGLLQKT 218
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHF 143
D +Y+P YG SLNV VAA+I+++H
Sbjct: 219 DLNLYVPLYGQAE-SLNVAVAAAILVYHL 246
>gi|374313708|ref|YP_005060138.1| TrmH family RNA methyltransferase [Granulicella mallensis MP5ACTX8]
gi|358755718|gb|AEU39108.1| RNA methyltransferase, TrmH family, group 3 [Granulicella mallensis
MP5ACTX8]
Length = 267
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++ + + HN+G L RSA G+ +I+ RR A S G++ HV +
Sbjct: 100 FLALDGVEDPHNLGALLRSADGSGIDGVIVPERRSAPLSATVAKSSAGASEHVRIAQVVN 159
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
++ A +K + I G++ D T F++ +LG+EG GL CD +
Sbjct: 160 ITRALETMKKHNVWIVGLD-ERGTPDYTDFDFRQDCCLVLGSEGSGLHELVKRTCDHLLR 218
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IP G +SLNV+VA ++V++
Sbjct: 219 IP-MAGSVSSLNVSVAGAVVMY 239
>gi|163847629|ref|YP_001635673.1| RNA methyltransferase [Chloroflexus aurantiacus J-10-fl]
gi|222525486|ref|YP_002569957.1| TrmH family RNA methyltransferase [Chloroflexus sp. Y-400-fl]
gi|163668918|gb|ABY35284.1| RNA methyltransferase, TrmH family, group 3 [Chloroflexus
aurantiacus J-10-fl]
gi|222449365|gb|ACM53631.1| RNA methyltransferase, TrmH family, group 3 [Chloroflexus sp.
Y-400-fl]
Length = 252
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 15 HNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSLSDARVFLKS 69
N+GTL R+A A G +++ GRR S G+ H+ +L+ L+
Sbjct: 110 QNIGTLLRTAEAVGCHGVVIPGRRAAEITPAVVNASSGAVEHLRVAMVTNLNQTIEELQH 169
Query: 70 KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTAS 129
+ G+E + A D+ A ++G EG G++ E CDF V +P G S
Sbjct: 170 AGIWVVGLEQDEQAQDIDAVDLDLPLALVIGAEGTGIARLVRERCDFLVRLP-IVGQVGS 228
Query: 130 LNVTVAASIVLHH 142
LN +A SI ++H
Sbjct: 229 LNAAIAGSIAIYH 241
>gi|157690879|ref|YP_001485341.1| tRNA/rRNA methyltransferase [Bacillus pumilus SAFR-032]
gi|194017547|ref|ZP_03056158.1| RNA methyltransferase, TrmH family, group 3 [Bacillus pumilus ATCC
7061]
gi|157679637|gb|ABV60781.1| tRNA/rRNA methyltransferase [Bacillus pumilus SAFR-032]
gi|194010819|gb|EDW20390.1| RNA methyltransferase, TrmH family, group 3 [Bacillus pumilus ATCC
7061]
Length = 249
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +++ RR A S G+ H+ +
Sbjct: 99 FLILDEIEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVAKVTN 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS A +K + + G + + D Q A ++G+EG G+ E CDF +
Sbjct: 159 LSRALDEMKERGIWVAGTDASAKQ-DYRQFDGTMPLALVIGSEGKGIGRLIKEKCDFLIK 217
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G SLN +VAAS++++
Sbjct: 218 LP-MAGKVTSLNASVAASLLMYE 239
>gi|87125562|ref|ZP_01081407.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. RS9917]
gi|86166862|gb|EAQ68124.1| putative tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus
sp. RS9917]
Length = 229
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSE---MILVGR-RDFNAFGSHGSTSHVNFRH 56
M + V+V ++ K HN+ + RS A GV E + L GR R FN+ + GS V R
Sbjct: 19 MADLTVLVEHVEKPHNLSAILRSCDAVGVLEAHAVSLSGRPRTFNS-TAQGSQRWVPLRD 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
++ A LK++ + G + +A D F AF+LG E GLS + D
Sbjct: 78 HPDITAAVHHLKAQGFKLYGTNLGVDARDYRDCDFTGPCAFVLGAEKWGLSDAATALMDQ 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
V+IP G SLNV+VA + +L
Sbjct: 138 AVFIPMR-GMVQSLNVSVATATLL 160
>gi|238918012|ref|YP_002931526.1| RNA methyltransferase, TrmH family [Edwardsiella ictaluri 93-146]
gi|238867580|gb|ACR67291.1| RNA methyltransferase, TrmH family [Edwardsiella ictaluri 93-146]
Length = 230
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGR--RDFNAFGSHGSTSHVNFRHFHSLS 61
V + + K HNV + R+A A GV ++ + G+ R + + GS S V+ + ++
Sbjct: 22 VCMEQVHKPHNVSAVIRTADAVGVHQVHAVWPGKSMRTLVSTAA-GSNSWVSVKTHRDIA 80
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
A LK + I ++ AVD + + + T L+G E G+SA+ ++ D + IP
Sbjct: 81 AAVGELKGQGMQILATNLSATAVDFREIDYTRPTCILMGQEKRGISAEALQLADRDIIIP 140
Query: 122 QYGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 141 MV-GMVQSLNVSVASALILY 159
>gi|308174562|ref|YP_003921267.1| RNA methylase [Bacillus amyloliquefaciens DSM 7]
gi|384165335|ref|YP_005546714.1| RNA methylase [Bacillus amyloliquefaciens LL3]
gi|384169478|ref|YP_005550856.1| RNA methylase [Bacillus amyloliquefaciens XH7]
gi|307607426|emb|CBI43797.1| putative RNA methylase [Bacillus amyloliquefaciens DSM 7]
gi|328912890|gb|AEB64486.1| putative RNA methylase [Bacillus amyloliquefaciens LL3]
gi|341828757|gb|AEK90008.1| putative RNA methylase [Bacillus amyloliquefaciens XH7]
Length = 257
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGST-SHVNFRHFHSL 60
++ +++ + N+GT+ R+A A G+ ++L D A G T HFH
Sbjct: 112 LKRLLLIDAVQDPGNLGTMIRTADAAGIDAVVL---GDGTADPYSGKTLRSAQGSHFHIP 168
Query: 61 SDARVF------LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEIC 114
R LKS+ I G + + AV + P ++S A ++GNEG G+ A +
Sbjct: 169 ILKRPLDEFIDELKSQGVAIYGTALENGAVYQSVKP-EESFALIVGNEGAGVDAGLLQKT 227
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHF 143
D +Y+P YG SLNV VAA+I+++H
Sbjct: 228 DLNLYVPLYGQAE-SLNVAVAAAILVYHL 255
>gi|182437537|ref|YP_001825256.1| RNA methyltransferase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778192|ref|ZP_08237457.1| tRNA/rRNA methyltransferase (SpoU) [Streptomyces griseus XylebKG-1]
gi|178466053|dbj|BAG20573.1| putative RNA methyltransferase [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326658525|gb|EGE43371.1| tRNA/rRNA methyltransferase (SpoU) [Streptomyces griseus XylebKG-1]
Length = 244
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V V N N+G++ R+A AF E+ +VGRR +N G+ + + + RH +D
Sbjct: 95 HVAVENWGHDFNIGSVVRTANAFLAKEIHIVGRRRWNRRGAMVTDRYQHVRHHPDTADLT 154
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ I G++ AV + + + L G EG GL+ + E I Q+
Sbjct: 155 AWAAAEGLPIIGIDNLPGAVPLERTELPRRCVLLFGQEGPGLTEEAREHASMVCSIAQF- 213
Query: 125 GGTASLN 131
G T S+N
Sbjct: 214 GSTRSIN 220
>gi|194336255|ref|YP_002018049.1| tRNA/rRNA methyltransferase SpoU [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308732|gb|ACF43432.1| tRNA/rRNA methyltransferase (SpoU) [Pelodictyon phaeoclathratiforme
BU-1]
Length = 180
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG-----RRDFNAFGSHGSTSHVNFRHFHSL 60
+++HNI NVG++ RSA A + ++IL G R A + G+ V + +
Sbjct: 30 LMLHNIRSMWNVGSMFRSADAARIEKIILSGYTATPPRKEIAKTALGAQDTVVWEYHADP 89
Query: 61 SDARVFLKSKDCDICGVEITD-----NAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
+A +K + ICG+EIT+ AV+ P ++GNE GL + + CD
Sbjct: 90 LEAVCSMKREGVRICGLEITEGSRPYTAVNAGDFPI----CLVVGNEVDGLENEILDSCD 145
Query: 116 FFVYIPQYGGGTASLNVTVAASIVL 140
+ IPQY G SLNV VAA I L
Sbjct: 146 DVLEIPQY-GTKHSLNVAVAAGIAL 169
>gi|410678801|ref|YP_006931203.1| spoU protein [Borrelia afzelii HLJ01]
gi|408536189|gb|AFU74320.1| spoU protein [Borrelia afzelii HLJ01]
Length = 218
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + HN R+ G+S++ ++ + + N + GS+ +N + + A
Sbjct: 38 VLEDIVQSHNASATIRTGEILGLSDIYVIDKNNKYTLNPDITLGSSQWINLNKYKNAKFA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I +++ +V++ A G E GLS++ E D + IP Y
Sbjct: 98 IDRLKSDGYSIVATSLSEQSVNLENFSINNKMAVFFGTELTGLSSEVLEAADLCIKIPMY 157
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD-GNKYVVAERSARQVRRSFCAE--KPES 180
G T S N++VA +IV++ + R R+ G Y++ E +R + + K
Sbjct: 158 -GFTQSYNISVAVAIVMYSLLI------RLRESGVDYLLNEVEKSNLRLKYYRQVVKNYQ 210
Query: 181 IIE 183
IIE
Sbjct: 211 IIE 213
>gi|319953644|ref|YP_004164911.1| tRNA/rRNA methyltransferase (spou) [Cellulophaga algicola DSM
14237]
gi|319422304|gb|ADV49413.1| tRNA/rRNA methyltransferase (SpoU) [Cellulophaga algicola DSM
14237]
Length = 176
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+V+ NI +N+G++ R+A AF + ++ L G +D + + G+T V + + +
Sbjct: 27 IVLDNIRSLNNIGSVFRTADAFLIEKIYLCGITAQPPHKDIHK-TALGATDSVVWEYVEN 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST--AFLLGNEGMGLSAKECEICDFF 117
D LK +E +NAV + K A + GNE G++ + CD
Sbjct: 86 TMDVIQSLKENKVTTIAIEQAENAVFLNDFKVSKDEKYALIFGNEVKGVAQEVVSSCDTV 145
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHFGVWAGFS 150
V IPQY G SLN++V+A +V+ + +WA +
Sbjct: 146 VEIPQY-GTKHSLNISVSAGVVV--WDLWAKLN 175
>gi|220924093|ref|YP_002499395.1| tRNA/rRNA methyltransferase SpoU [Methylobacterium nodulans ORS
2060]
gi|219948700|gb|ACL59092.1| tRNA/rRNA methyltransferase (SpoU) [Methylobacterium nodulans ORS
2060]
Length = 259
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+ + I HNVG + R+A AF V+ ++ R A G + G HV F +
Sbjct: 114 LLALDQITDPHNVGAIVRTAAAFNVTAIVTTARHSPAATGVLAKSASGGLEHVPFVTVRN 173
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L++A + L + G++ ++ V + Q +LG EG GL + E CD
Sbjct: 174 LAEALIDLGERGFTRIGLD-SEAPVPLDQVTPAPPLVIVLGAEGKGLRQRTRECCDVMAR 232
Query: 120 IPQYGGGTASLNVTVAASIVLHHFG 144
+ + G SLNV+ AA+I L+
Sbjct: 233 L-DFPGAIKSLNVSNAAAITLYALA 256
>gi|409357512|ref|ZP_11235890.1| hypothetical protein Dali7_06642 [Dietzia alimentaria 72]
Length = 232
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF +E+ +VGRR +N G+ + + + RH +S
Sbjct: 82 HVAIENFGHDANIGTVVRTANAFLAAEVHIVGRRRWNRRGAMVTDRYQHLRHHEDISALM 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ +++ + V+ A + + L G EG G+S V I Q+
Sbjct: 142 DWAEAEGLPVVAVDNLPGADPLETVSLPPACVLLFGQEGPGVSGDARLRAVRTVSIAQF- 200
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 201 GSTRSINAGVAAGIAMHAW 219
>gi|386759427|ref|YP_006232643.1| putative RNA methylase [Bacillus sp. JS]
gi|384932709|gb|AFI29387.1| putative RNA methylase [Bacillus sp. JS]
Length = 248
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ ++L G +AF + GS H+ ++ S D L
Sbjct: 117 NLGTMIRTADAAGLDAVVL-GDGTADAFNGKTLRSAQGSHFHIPVVRKNLQSYVDE---L 172
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
K++ + G + N + P +S A ++GNEG G+ A E D +Y+P YG
Sbjct: 173 KAEGVKVYGTAL-QNGAPYREIPQSESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAE 231
Query: 128 ASLNVTVAASIVLHHF 143
SLNV VAA+I+++H
Sbjct: 232 -SLNVAVAAAILVYHL 246
>gi|337288717|ref|YP_004628189.1| TrmH family RNA methyltransferase [Thermodesulfobacterium sp.
OPB45]
gi|334902455|gb|AEH23261.1| RNA methyltransferase, TrmH family, group 3 [Thermodesulfobacterium
geofontis OPF15]
Length = 248
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFG---SHGSTSHVNFRHFHSL 60
+++ + NVG++ R+A A GV +++ R D N S GS ++ ++L
Sbjct: 101 IMLDEVEDPQNVGSIIRTADAGGVHGIVIPKLRACDINETVIKVSSGSVFNIPIAKVNNL 160
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A F K K+ I G+ + + + + KK F++GNEG G+ E CDF I
Sbjct: 161 KHAISFFKEKNLWIIGLT-HKSDISIYELDLKKPLVFIVGNEGRGIRKTILEKCDFLAKI 219
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLNV++A +I +
Sbjct: 220 PMR-GKIESLNVSIATAIAI 238
>gi|402494833|ref|ZP_10841569.1| tRNA/rRNA methyltransferase SpoU [Aquimarina agarilytica ZC1]
Length = 150
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRR-DFNAFGSHGSTSHVNFRHFHSLSDARVF 66
+ N N+G L RSA G S + +G R A +H + + + H+ + D F
Sbjct: 15 IQNGKTPENLGVLWRSAQNMGASFIFTIGNRYAKQACDTHNAVKSMPYYHYDTFDD---F 71
Query: 67 LK--SKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
K K + GVE+ D A D+ + A+LLG E GLS K E F +
Sbjct: 72 FKHLPKGVRLVGVELDDTAQDLETFEHPRRCAYLLGAEDHGLSKKAIEKSHFLIKFKS-- 129
Query: 125 GGTASLNVTVAASIVLH 141
T SLNV VA SI+++
Sbjct: 130 --TLSLNVAVAGSIIMY 144
>gi|386772534|ref|ZP_10094912.1| rRNA methylase [Brachybacterium paraconglomeratum LC44]
Length = 216
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 1/128 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N+ N+G++ R+A AF V +VGRR +N G+ + + + H +
Sbjct: 66 HVAIENLEHDANIGSVVRTANAFAVGAFHIVGRRRWNRRGAMVTDRYQHEIHHPDAAHLI 125
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + +++ AV + + ++ ++G EG G+S + E D V I Q+
Sbjct: 126 AWAREEGRPLVAIDLVPGAVPLERTALPRNAVLVVGQEGPGVSRELLEAADLVVGITQF- 184
Query: 125 GGTASLNV 132
G T SLNV
Sbjct: 185 GSTRSLNV 192
>gi|88809215|ref|ZP_01124724.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
7805]
gi|88787157|gb|EAR18315.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
7805]
Length = 229
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILV---GR-RDFNAFGSHGSTSHVNFRH 56
M + V+V ++ K HN+ + RS A GV E V GR R FN+ + GS V+ R
Sbjct: 19 MSDLTVLVEHVEKPHNLSAILRSCDAVGVLEAHAVSFSGRPRTFNS-TAQGSQRWVSLRD 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+S A LK + + G + +A D F AF+LG E GL+ + + D
Sbjct: 78 HADISTAVHHLKERSFRLYGTNLGVDARDYRDCDFTGPCAFVLGAEKWGLTEEATALMDQ 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
++IP G SLNV+VA + +L+
Sbjct: 138 AIFIPMR-GMVQSLNVSVATATLLY 161
>gi|392389906|ref|YP_006426509.1| rRNA methylase [Ornithobacterium rhinotracheale DSM 15997]
gi|390520984|gb|AFL96715.1| rRNA methylase [Ornithobacterium rhinotracheale DSM 15997]
Length = 175
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFR 55
I VV+ NI HNVG + R+ AF + +++L G ++ + G+T V +
Sbjct: 23 IPLVVVLDNIRSMHNVGAVFRTGDAFVIEKLVLCGITATPPNKEIRK-TAIGATESVTWE 81
Query: 56 HFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKK--STAFLLGNEGMGLSAKECEI 113
+ DA LK + I VE +++ D T +K A +LGNE G+ ++
Sbjct: 82 YEKETIDAVQKLKDEGYKIVCVEQVESSTDFTDFVPEKGEKYALILGNEVSGVQQSVVDL 141
Query: 114 CDFFVYIPQYGGGTASLNVTVAASIVLHHF 143
D + IPQ G SLNV+V A IV+ F
Sbjct: 142 SDICLEIPQ-SGTKHSLNVSVCAGIVMWQF 170
>gi|182678319|ref|YP_001832465.1| RNA methyltransferase [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634202|gb|ACB94976.1| RNA methyltransferase, TrmH family, group 3 [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 293
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
+V+ I HNVG + R+A AF V + I+ R A G + G HV +
Sbjct: 150 LVLDQITDPHNVGAIVRTAAAFDV-DAIVTTERHAPALGGVLAKAASGGLEHVQIVPVVN 208
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ A L + G++ A D TQ P ++ A +LG EG GL E CDF
Sbjct: 209 LARALETLGRLNYLRVGLDSAAEA-DFTQLPLQRPIALVLGGEGTGLRRLTREKCDFLAR 267
Query: 120 IPQYGGGTASLNVTVAASIVLHHFG 144
+ G SLNV+ A ++VL G
Sbjct: 268 L-DMPGKIKSLNVSNACAVVLTLIG 291
>gi|54027361|ref|YP_121603.1| RNA methyltransferase [Nocardia farcinica IFM 10152]
gi|54018869|dbj|BAD60239.1| putative RNA methyltransferase [Nocardia farcinica IFM 10152]
Length = 235
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + RH +++ R
Sbjct: 87 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHIRHHADVAELR 146
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ AV + + L G EG G++ + V I Q+
Sbjct: 147 DFADRTGLTVVAVDNVPGAVPLETVELPRECLLLFGQEGPGVTEPAKQAAAMTVSIAQF- 205
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 206 GSTRSINAGVAAGIAMHAW 224
>gi|406027303|ref|YP_006726135.1| TrmH family RNA methyltransferase [Lactobacillus buchneri CD034]
gi|405125792|gb|AFS00553.1| RNA methyltransferase, TrmH family [Lactobacillus buchneri CD034]
Length = 266
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
+V++ NI HN+G++ R+A A GVS +I+ VG + S G+ V +
Sbjct: 117 FVILDNIEDPHNLGSIIRTADAAGVSGIIIPKHRAVGLTATVSKTSAGAIERVPVARVTN 176
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + + G +++ D + K S A ++GNEG G+S + D +
Sbjct: 177 LSATIKELKQRGMWVFGTDVS--GTDYRRWDAKGSIAVIIGNEGKGISPLLKKQVDEMLT 234
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAASI+++ GF+ R
Sbjct: 235 IPMV-GDIQSLNASVAASILIYQ-----GFNSR 261
>gi|365860647|ref|ZP_09400442.1| putative RNA methyltransferase [Streptomyces sp. W007]
gi|364009804|gb|EHM30749.1| putative RNA methyltransferase [Streptomyces sp. W007]
Length = 254
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V V N N+G++ R+A AF E+ +VGRR +N G+ + + + RH +D
Sbjct: 103 HVAVENWGHDFNIGSVVRTANAFLAKEIHIVGRRRWNRRGAMVTDRYQHVRHHPDTADLT 162
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ I G++ AV + + + L G EG GL+ + E I Q+
Sbjct: 163 AWAAAEGLPIIGIDNLPGAVPLERTELPRRCVLLFGQEGPGLTEEAREHASMVCSIAQF- 221
Query: 125 GGTASLN 131
G T S+N
Sbjct: 222 GSTRSIN 228
>gi|422316944|ref|ZP_16398319.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
periodonticum D10]
gi|404590425|gb|EKA92830.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
periodonticum D10]
Length = 234
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
+++ I N G + RSA F V ++IL+ R+ S G+ +VN +
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKV-DLILIPERNSVRINETVVKTSTGAIEYVNISKVTN 149
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LSD LK D + G + +++ + + +LGNEG G+ K E CD +
Sbjct: 150 LSDTINKLKKLDYWVYGAA-GEASINYNEEDYPNKIVLVLGNEGSGIRKKVREHCDKLIK 208
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP + G SLNV+VA+ I+L
Sbjct: 209 IPMF-GQINSLNVSVASGILLSRI 231
>gi|352517858|ref|YP_004887175.1| putative RNA methyltransferase [Tetragenococcus halophilus NBRC
12172]
gi|348601965|dbj|BAK95011.1| putative RNA methyltransferase [Tetragenococcus halophilus NBRC
12172]
Length = 252
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A A G + I +G+ + + GS H+
Sbjct: 110 WLLLDNVQDPGNVGTIVRTADAAGF-DGIFLGKGTADRYSGKVLRSMQGSQFHLPIFS-G 167
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+L + K + G + +A+ TQ + S A +LGNEG G++ + ++ D +
Sbjct: 168 ALEEVIPVFKKHTSKVYGTALDPSALSYTQVKQESSFALILGNEGQGVAEEILQMADQNL 227
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
YIP YG SLNV VAA I+++ F
Sbjct: 228 YIPIYGKAE-SLNVGVAAGILMYAF 251
>gi|331701828|ref|YP_004398787.1| TrmH family RNA methyltransferase [Lactobacillus buchneri NRRL
B-30929]
gi|329129171|gb|AEB73724.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus buchneri
NRRL B-30929]
Length = 266
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
+V++ NI HN+G++ R+A A GVS +I+ VG + S G+ V +
Sbjct: 117 FVILDNIEDPHNLGSIIRTADAAGVSGIIIPKHRAVGLTATVSKTSAGAIERVPVARVTN 176
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + + G +++ D + K S A ++GNEG G+S + D +
Sbjct: 177 LSATIKELKQRGMWVFGTDVS--GTDYRRWDAKGSIAVIIGNEGKGISPLLKKQVDEMLT 234
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAASI+++ GF+ R
Sbjct: 235 IPMV-GDIQSLNASVAASILIYQ-----GFNSR 261
>gi|299541908|ref|ZP_07052231.1| trmH family tRNA/rRNA methyltransferase yacO [Lysinibacillus
fusiformis ZC1]
gi|424739348|ref|ZP_18167767.1| trmH family tRNA/rRNA methyltransferase yacO [Lysinibacillus
fusiformis ZB2]
gi|298725646|gb|EFI66287.1| trmH family tRNA/rRNA methyltransferase yacO [Lysinibacillus
fusiformis ZC1]
gi|422946745|gb|EKU41151.1| trmH family tRNA/rRNA methyltransferase yacO [Lysinibacillus
fusiformis ZB2]
Length = 250
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A G +I+ RR + A S G+ HV ++
Sbjct: 100 FLILDELEDPHNLGSIMRTADAIGAHGIIIPKRRSVSLTAVVAKASTGAIEHVPVVRVNN 159
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + +A D + A ++G+EG G+ E CDF +
Sbjct: 160 LAQTIDELKERGIWIAGTDAKGSA-DYRKMDATLPLAIIIGSEGKGMGRLLKEKCDFLYH 218
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAA+++++
Sbjct: 219 LPMVGHVT-SLNASVAAALLMYE 240
>gi|340753595|ref|ZP_08690371.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
2_1_31]
gi|229423157|gb|EEO38204.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
2_1_31]
Length = 234
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
+++ I N G + RSA F V ++IL+ R+ S G+ +VN +
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKV-DLILIPERNSVRINETVVKTSTGAIEYVNISKVTN 149
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LSD LK D + G + +++ + + +LGNEG G+ K E CD +
Sbjct: 150 LSDTINKLKKLDYWVYGAA-GEASINYNEEDYPNKIVLVLGNEGSGIRKKVREHCDKLIK 208
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP + G SLNV+VA+ I+L
Sbjct: 209 IPMF-GQINSLNVSVASGILLSRI 231
>gi|237744635|ref|ZP_04575116.1| 23S rRNA methyltransferase [Fusobacterium sp. 7_1]
gi|229431864|gb|EEO42076.1| 23S rRNA methyltransferase [Fusobacterium sp. 7_1]
Length = 258
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNFRHFHS 59
V++ +++ N+GT+ R A ++IL +R +A+ + GS +VN +
Sbjct: 111 VILDDVSDPGNLGTIIRICDATNFKDIILT-KRTVDAYNEKVIRATMGSILNVNLYYLEK 169
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
S FLK + I + A+ + K+ A + GNEG G+S+ I D+
Sbjct: 170 -SKIINFLKENNYSIISTYLDKTAIPYNKIELKEKNAIVFGNEGNGISSDFINITDYKTI 228
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP T SLNV VA I+L+ F
Sbjct: 229 IPIL-SNTESLNVAVATGIILYKF 251
>gi|116669083|ref|YP_830016.1| tRNA/rRNA methyltransferase SpoU [Arthrobacter sp. FB24]
gi|116609192|gb|ABK01916.1| tRNA/rRNA methyltransferase (SpoU) [Arthrobacter sp. FB24]
Length = 224
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF E+ ++GRR +N G+ + + + RH ++ D
Sbjct: 77 HIAIENWQHDLNIGTVVRTANAFLAKEVHIIGRRRWNRRGAMVTDRYQHVRHHPTVEDFV 136
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + I G++I ++V + + K+ + G EG GL+ + E + I Q+
Sbjct: 137 AWAQGEGLAIIGIDIFPDSVPLETYDLPKNCVLVFGQEGPGLTPEVHEAAVDTLSIEQF- 195
Query: 125 GGTASLN 131
G T S+N
Sbjct: 196 GSTRSIN 202
>gi|332299037|ref|YP_004440959.1| TrmH family RNA methyltransferase [Treponema brennaborense DSM
12168]
gi|332182140|gb|AEE17828.1| RNA methyltransferase, TrmH family, group 3 [Treponema
brennaborense DSM 12168]
Length = 262
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDF-NAFGSH-------GSTSHVNF 54
++ VV+ ++ HN+G + RS GVS +L RR N GS G+++ V
Sbjct: 112 QTVVVLDSVTDPHNIGAILRSCDQLGVSLAVLPERRGVKNVDGSEVISRASAGASAWVPI 171
Query: 55 RHFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEIC 114
+L A LK+ I G + VT F T ++G+EG G+S E C
Sbjct: 172 SIASNLVRAVGQLKAAGFWIYGAD--SGGTPVTDVDFPPRTVLIMGSEGSGISRLLAEQC 229
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHF 143
D V IP G SLNV+VAA I+L+
Sbjct: 230 DRIVSIPTC-GKLDSLNVSVAAGILLYDI 257
>gi|227514006|ref|ZP_03944055.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus fermentum
ATCC 14931]
gi|227087650|gb|EEI22962.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus fermentum
ATCC 14931]
Length = 251
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ +A HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 103 FLILDELADPHNLGSILRTADAAGVHGIIIPKRRSVGLTSVVAKTSTGAIEHVPVARVTN 162
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L L+ + G ++ D + K + A ++GNEG G+S + CD +
Sbjct: 163 LVQVAKELQKSGVWLFGTDM--QGTDYRRWDAKGAVALVIGNEGKGISPLLKKTCDEMLT 220
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++ ++ GF+ R
Sbjct: 221 IPMI-GHVQSLNASVAASLL-----IYQGFATR 247
>gi|386715026|ref|YP_006181349.1| RNA methyltransferase [Halobacillus halophilus DSM 2266]
gi|384074582|emb|CCG46075.1| RNA methyltransferase [Halobacillus halophilus DSM 2266]
Length = 244
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNFRHFH- 58
++V + N+GTL R+A A G ++L G + + + GS H+ HF
Sbjct: 103 LLVDAVQDPGNLGTLIRTADAAGFDHIVL-GTGTVDPYNDKVIRATQGSIFHIP--HFKG 159
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
L D LKS I + ++ P +K+ A ++GNEG G+S ++ + V
Sbjct: 160 DLEDYIEELKSSGASIWASTLQNSTPFQKLQPQEKA-ALIVGNEGQGISQDLVDLANELV 218
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
YIP YG SLNV++AA+++++H
Sbjct: 219 YIPIYGEA-ESLNVSIAAAVLMYHM 242
>gi|410901507|ref|XP_003964237.1| PREDICTED: probable methyltransferase TARBP1-like [Takifugu rubripes]
Length = 1487
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 31/156 (19%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
VV I K N+G L R+ FG S ++L S HV+ +HF SLS +
Sbjct: 1328 VVASLIDKPTNLGGLCRTCEIFGASALVL------------DSLRHVSDKHFQSLSVSSE 1375
Query: 66 ---------------FLKSKDCD---ICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLS 107
FL++K + I GVE T N+ + + F + T LLGNE G+
Sbjct: 1376 LWLPLMEVKPVQLTDFLQAKKNEGYCIVGVEQTANSQSLQHYQFPEKTLLLLGNEREGIP 1435
Query: 108 AKECEICDFFVYIPQYGGGTASLNVTVAASIVLHHF 143
A ++ D V IPQ G SLNV V+A++++ +
Sbjct: 1436 ANLLQMLDVCVEIPQQ-GIIRSLNVHVSAALLIWEY 1470
>gi|189183948|ref|YP_001937733.1| tRNA/rRNA methyltransferase, TrmH family [Orientia tsutsugamushi
str. Ikeda]
gi|189180719|dbj|BAG40499.1| tRNA/rRNA methyltransferase, TrmH family [Orientia tsutsugamushi
str. Ikeda]
Length = 266
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH-----GSTSHVNFRHFHSLS 61
++ + +N+G + RSA AF +S +IL G+ G+ +N +L
Sbjct: 119 ILDQLLDHNNLGAIIRSAAAFNISTIILPENNSIEENGTIAKIAVGALEKINLVKVKNLY 178
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+ +LK I G+++ +N+ +T+ F AF+LG+E GL + CDF + IP
Sbjct: 179 NTINYLKKYGFWIIGLDL-NNSNQLTEQTFHSKMAFVLGSENKGLRNLTRQQCDFLIKIP 237
Query: 122 QYGGGTASLNVTVAASIVLH 141
T SLNV AA+I+ +
Sbjct: 238 M-SHKTESLNVAGAATIIFY 256
>gi|19704851|ref|NP_602346.1| 23S rRNA methyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19712732|gb|AAL93645.1| 23S rRNA methyltransferase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 234
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G N + + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAAGEAN-ISYNEEDYSNKVVLVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|365851695|ref|ZP_09392118.1| RNA methyltransferase, TrmH family [Lactobacillus parafarraginis
F0439]
gi|363716208|gb|EHL99619.1| RNA methyltransferase, TrmH family [Lactobacillus parafarraginis
F0439]
Length = 255
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 9/146 (6%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS------HGSTSHVNFRHF 57
S++++ NI N+GT+ R+A A G++ +I G+ + + GS H+ +
Sbjct: 111 SWLLLDNIQDPGNIGTMVRTADAAGMNGVIF-GKGSADIYNPKVVRSMQGSQFHLRL-YS 168
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
L++ + I G E+ A+ + K A ++GNEG G+S++ D
Sbjct: 169 GDLAEWLTAFSKHNVPIYGTELNPQAIPYSSAAPTKQFALIVGNEGNGVSSELLAKTDQN 228
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+YIP G SLNV VA IV+ HF
Sbjct: 229 LYIPMKGEA-ESLNVAVATGIVIFHF 253
>gi|386852762|ref|YP_006270775.1| 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB [Actinoplanes sp.
SE50/110]
gi|359840266|gb|AEV88707.1| 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB [Actinoplanes sp.
SE50/110]
Length = 210
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N N+GT+ R+A AF +E+ +VG R +N G+ + + + RH ++ D
Sbjct: 63 HIAIENWQHDLNIGTVVRNANAFLAAEVHIVGLRKWNRRGAMVTDRYQHVRHHPTIEDFV 122
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + G++ + + + L G EG GLS C I QY
Sbjct: 123 GWATAAGLPVIGIDNLPGSRPMETVTLPRRCVLLFGQEGPGLSDVARHACTQLFSIAQY- 181
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VA+ I +H +
Sbjct: 182 GSTRSINAGVASGIAMHAW 200
>gi|358467173|ref|ZP_09176929.1| hypothetical protein HMPREF9093_01405 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068321|gb|EHI78343.1| hypothetical protein HMPREF9093_01405 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 234
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
+++ I N G + RSA F V ++IL+ R+ S G+ +VN +
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKV-DLILIPERNSVRINETVVKTSTGAIEYVNISKVTN 149
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LSD LK D + G + +++ + + +LGNEG G+ K E CD +
Sbjct: 150 LSDTINKLKKLDYWVYGAA-GEASINYNEEDYPNKIVLVLGNEGSGIRKKVREHCDKLIK 208
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP + G SLNV+VA+ I+L
Sbjct: 209 IPMF-GQINSLNVSVASGILLSRI 231
>gi|384176454|ref|YP_005557839.1| YsgA [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349595678|gb|AEP91865.1| YsgA [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 248
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ ++L G +AF + GS H+ R S D L
Sbjct: 117 NLGTMIRTADAAGLDAVVL-GDGTADAFNGKTLRSAQGSHFHIPVVRRDLLSYVDE---L 172
Query: 68 KSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGT 127
K++ + G + N + P +S A ++GNEG G+ A E D +Y+P YG
Sbjct: 173 KAEGVKVYGTAL-QNGAPYQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAE 231
Query: 128 ASLNVTVAASIVLHHF 143
SLNV VAA+I+++H
Sbjct: 232 -SLNVAVAAAILVYHL 246
>gi|15612676|ref|NP_240979.1| tRNA/rRNA methyltransferase [Bacillus halodurans C-125]
gi|10172725|dbj|BAB03832.1| tRNA/rRNA methyltransferase [Bacillus halodurans C-125]
Length = 249
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++V+ + HN+G++ R+A A GV +I+ RR A S G+ +V +
Sbjct: 98 FIVLDEVEDPHNLGSILRTADAAGVHGVIIPKRRAVGLTQTVAKASTGAIEYVPVVRVTN 157
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + G + + D + A ++G+EG GLS E CDF V
Sbjct: 158 LARTMEDLKKRGLWFIGTD-AKGSEDYRGAAYDMPIALVIGSEGKGLSRLVREKCDFLVR 216
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G T SLN +VA S++++
Sbjct: 217 IPMVGQVT-SLNASVATSLLMYE 238
>gi|409201170|ref|ZP_11229373.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas
flavipulchra JG1]
Length = 232
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSD--- 62
V + + K HN+ + R+A A G + V +D ++ S N+ H D
Sbjct: 22 VCLDEVHKHHNLSAIVRTADAVGCHHVHAVWPQDQRRLTNNTSGGSKNWVETHMHEDIDQ 81
Query: 63 --ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A + ++ + ++D+AVD + + K TA ++G E +G+S + E D + I
Sbjct: 82 AVATIREQNPGVQLLATNLSDSAVDFREIDYTKPTAIIVGQERLGISERALEHADQHIVI 141
Query: 121 PQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRD-GNKYVVAERSARQVRRSFCAEKPE 179
P G SLNV+VAA+++L+ ++R RD Y + V+ E
Sbjct: 142 P-MQGMVQSLNVSVAAALILYE-------AQRQRDAAGLYKRTDMMDPVVKHKLLFEGCH 193
Query: 180 SIIEMRRSRRENASNGFFDGSGNDVSSSSLLDAL 213
II R R + D G V+ + D L
Sbjct: 194 PIIAT-RCREKGLPYPALDEHGEIVADDAFWDIL 226
>gi|257146495|emb|CAX30784.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Conomelus anceps]
gi|257146515|emb|CAX30799.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Delphacidae sp.]
Length = 239
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSH-VNFRHFHSLSD 62
V + N+ K HN+ + R+A A G+ ++ I + + ++H V R S+ +
Sbjct: 22 VCLENVHKPHNISAVIRTADAVGIPQIHAIWCKNSSKSLSAAAAGSNHWVKVRTHASIEN 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A K+ I +T+ A+D Q + + T +LG E G+S + + D ++IP
Sbjct: 82 AISTCKAAGMQILAAHLTNQAIDFRQIDYNQPTCIILGQERAGISKQALALADHNIHIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 M-GMVQSLNVSVASALILY 159
>gi|410463459|ref|ZP_11316973.1| rRNA methylase [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983423|gb|EKO39798.1| rRNA methylase [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 196
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNF----RHFHSL 60
+V++NI HNV + RS AFG+ + +L F A G S S + RH +
Sbjct: 26 LVINNIHDPHNVSAILRSCDAFGIHRVHLLYTDTAFPALGKKSSGSAKKWVETVRHKDAA 85
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S A LK + + T+ AV + + TA +LGNE G+ D +YI
Sbjct: 86 SLAAT-LKGQGFRLVATSFTETAVPLQKWDLTTKTAIILGNEHSGVDEDLAPHVDGALYI 144
Query: 121 PQYGGGTASLNVTVAASIVLH 141
P G SLNV+VAA+++L+
Sbjct: 145 PMM-GMVQSLNVSVAAAVILY 164
>gi|384430458|ref|YP_005639818.1| tRNA guanosine-2'-O-methyltransferase [Thermus thermophilus
SG0.5JP17-16]
gi|333965926|gb|AEG32691.1| tRNA guanosine-2'-O-methyltransferase [Thermus thermophilus
SG0.5JP17-16]
Length = 194
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 75/156 (48%), Gaps = 9/156 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V++ N+ K HN+ + R+ A GV E V G FN S GS V R +
Sbjct: 25 VLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNE-TSGGSHKWVYLRVHPDIR 83
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+A L+++D + + ++A D + + K T LLG E G+S + + D + IP
Sbjct: 84 EAFRHLRARDFRVYATALREDAQDFREVDYTKPTCVLLGAEKWGVSEEALALADGAIKIP 143
Query: 122 QYGGGTASLNVTVAASIVL---HHFGVWAGFSERTR 154
G SLNV+VAA+++L + AG +R R
Sbjct: 144 ML-GMVQSLNVSVAAAVILFEAQRQRLKAGLYDRPR 178
>gi|172036714|ref|YP_001803215.1| RNA methyltransferase TrmH, group 3 [Cyanothece sp. ATCC 51142]
gi|354554528|ref|ZP_08973832.1| RNA methyltransferase, TrmH family, group 3 [Cyanothece sp. ATCC
51472]
gi|171698168|gb|ACB51149.1| RNA methyltransferase TrmH, group 3 [Cyanothece sp. ATCC 51142]
gi|353553337|gb|EHC22729.1| RNA methyltransferase, TrmH family, group 3 [Cyanothece sp. ATCC
51472]
Length = 292
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
V+ IA HN+G + R+A A G +I+ RR A G + S V+ S ARV
Sbjct: 141 VIADGIADPHNLGAIIRTAEAMGCQGLIIPQRR---AAGVTSTVSKVSAGALESFPVARV 197
Query: 66 FLKSKDCDICGVE-------ITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
S+ + E + + + F+ + ++G+EG GLS CD +
Sbjct: 198 VNLSRALETLKAEGFWIYGTVAEGGKRLQDFDFRGAIGLVIGSEGSGLSLLTQRCCDELI 257
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
IP G T SLN +VAA+I L+
Sbjct: 258 SIP-LEGKTPSLNASVAAAINLYEI 281
>gi|345862721|ref|ZP_08814935.1| putative tRNA (guanosine-2'-O-)-methyltransferase [endosymbiont of
Tevnia jerichonana (vent Tica)]
gi|345126063|gb|EGW55929.1| putative tRNA (guanosine-2'-O-)-methyltransferase [endosymbiont of
Tevnia jerichonana (vent Tica)]
Length = 191
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
+V+ ++ NV + RSA AFG E+ LV F+ + GS V R F ++
Sbjct: 41 IVLDHMKAGFNVAKIFRSAEAFGAHEIHLVNIGPFDPSPAKGSFKKVPARFFERFEESHA 100
Query: 66 FLKSKDCDICGVE--ITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF-FVYIPQ 122
LK + + ++ D+ +D P + AF+LG+E G S + E D + IPQ
Sbjct: 101 ELKRRGYQLITLDAGCGDSLIDT---PLPQKCAFILGHEEFGHSFEPEEYPDIGCLSIPQ 157
Query: 123 YGGGTASLNVTVAASIVLHHF 143
+ G SLNV VAAS+V+ +
Sbjct: 158 F-GQVESLNVAVAASVVMFEY 177
>gi|149199824|ref|ZP_01876854.1| tRNA/rRNA methyltransferase [Lentisphaera araneosa HTCC2155]
gi|149137112|gb|EDM25535.1| tRNA/rRNA methyltransferase [Lentisphaera araneosa HTCC2155]
Length = 168
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVN 53
+E VV+ + HNVG + R A A V + G + A H G+ VN
Sbjct: 17 VEVIVVLDRLRSAHNVGNIFRLADAANVEAVYTCG---YTASPPHPKLEKTAMGTDEFVN 73
Query: 54 FRHF-HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECE 112
HF HSL +A LK + V+ D+A+DV + F AF+ GNE +G+ + E
Sbjct: 74 CEHFDHSL-EAVGSLKKNGYRVYAVDTIDSAIDVHEAQFSGKCAFVFGNEALGIQQETLE 132
Query: 113 ICDFFVYIPQYGGGTASLNVTVAASIVL 140
CD ++ + +G S+NV+ A++VL
Sbjct: 133 ACDEYIRLNAHGRKN-SINVSNCAAVVL 159
>gi|116872590|ref|YP_849371.1| rRNA methyltransferase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741468|emb|CAK20592.1| rRNA methyltransferase, TrmH family [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 252
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH------S 59
++V + NVGTL R+A A G +IL GR + + S HFH
Sbjct: 110 LLVDAVQDPGNVGTLIRTADAAGYDCVIL-GRGSADLYNPKVIRS-TQGSHFHIPVIQAD 167
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L D L+ + + G + + A + P +++ A ++GNEG G+S + E VY
Sbjct: 168 LFDWIANLEEEGVPVIGAVLDEQAKSLNDMPKRETLALMVGNEGNGISPELQERLSEKVY 227
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IP Y G + SLNV VAA I+L+
Sbjct: 228 IPIY-GDSESLNVAVAAGILLY 248
>gi|339634550|ref|YP_004726191.1| tRNA/rRNA methyltransferase [Weissella koreensis KACC 15510]
gi|338854346|gb|AEJ23512.1| tRNA/rRNA methyltransferase [Weissella koreensis KACC 15510]
Length = 286
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ +I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 139 FLILDSIEDPHNLGSILRTADAAGVHGVIIPKRRAVQLTATVAKTSTGAIEHVPVARVTN 198
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK + I G ++ N D Q + + A ++GNEG G++ + D +
Sbjct: 199 LVQTVEQLKERGLWIFGTDM--NGTDYRQWDARGAVALIIGNEGKGIAQLLKKSVDEMLT 256
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++ ++ GF+ R
Sbjct: 257 IPMV-GHVQSLNASVAASLL-----IYGGFNSR 283
>gi|257146507|emb|CAX30793.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Glycaspis brimblecombei]
gi|257146511|emb|CAX30796.1| tRNA (Guanosine-2'-O-)-methyltransferase [Arsenophonus endosymbiont
of Diaphorina citri]
Length = 239
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSH-VNFRHFHSLSD 62
V + N+ K HN+ + R+A A G+ ++ I + + ++H V R S+ +
Sbjct: 22 VCLENVHKPHNISAVIRTADAVGIPQIHAIWCKNSSKSLSAAAAGSNHWVKVRTHASIEN 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A K+ I +T+ A+D Q + + T +LG E G+S + + D ++IP
Sbjct: 82 AISACKAAGIQILAAHLTNQAIDFRQIDYNQPTCIILGQERAGISKQALALADHNIHIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VA++++L+
Sbjct: 142 M-GMVQSLNVSVASALILY 159
>gi|425738226|ref|ZP_18856492.1| SpoU rRNA methylase [Staphylococcus massiliensis S46]
gi|425480236|gb|EKU47404.1| SpoU rRNA methylase [Staphylococcus massiliensis S46]
Length = 249
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ + HN+G++ R+A A G+ +I+ RR A S G+ HV +L
Sbjct: 98 LILDGLEDPHNLGSILRTADATGIDAIIIPKRRSVALTQVVAKASTGAIEHVPVIRVTNL 157
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S L+ K G E ++ D + A ++G+EG G S E CDFF+ I
Sbjct: 158 SQTMDTLRDKGYWFVGSE-AKHSTDYREMDAGMPLAIVIGSEGQGTSRVVLEKCDFFLNI 216
Query: 121 PQYGGGTASLNVTVAASIVLH 141
P G SLN +VAAS++++
Sbjct: 217 PMV-GHVNSLNASVAASLLMY 236
>gi|338741381|ref|YP_004678343.1| tRNA/rRNA methyltransferase SpoU [Hyphomicrobium sp. MC1]
gi|337761944|emb|CCB67779.1| tRNA/rRNA methyltransferase (SpoU) [Hyphomicrobium sp. MC1]
Length = 168
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 11 IAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTS--HVNFRHFHSLSDARVFLK 68
++K N+G L RSA AFG S VG + A ++ TS ++ H++ S + L
Sbjct: 23 MSKSLNLGNLMRSAHAFGASFTFTVGA-TYKAAEAYADTSKSQLHLPHYNWSSLDEMALP 81
Query: 69 SKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGG 126
C + G+E+ D+A+D+ +HP + A++LG E LS E CD+ V IP
Sbjct: 82 G-GCKLVGIELLDDAIDLPSFRHPLR--AAYVLGPELGSLSEPLIERCDYVVKIPT---- 134
Query: 127 TASLNVTVAASIVLH 141
+NV +A +IV++
Sbjct: 135 AFCVNVAMAGAIVMY 149
>gi|315281992|ref|ZP_07870501.1| RNA methyltransferase [Listeria marthii FSL S4-120]
gi|313614371|gb|EFR88006.1| RNA methyltransferase [Listeria marthii FSL S4-120]
Length = 252
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 9/145 (6%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH---- 58
+ ++V + NVGTL R+A A G + +++GR + + S HFH
Sbjct: 107 KKLLLVDAVQDPGNVGTLIRTADAAGY-DCVVLGRGSADLYNPKVIRS-TQGSHFHIPVI 164
Query: 59 --SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
L D L+ + + G + D A + P +++ A ++GNEG G+S + +
Sbjct: 165 QADLFDWIANLEEEGVPVIGAVLDDQAKSLNDMPKRETLALMVGNEGNGISPELQDRLSE 224
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
VYIP Y G + SLNV VAA I+L+
Sbjct: 225 KVYIPIY-GDSESLNVAVAAGILLY 248
>gi|262066778|ref|ZP_06026390.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
periodonticum ATCC 33693]
gi|291379581|gb|EFE87099.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium
periodonticum ATCC 33693]
Length = 234
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNFRHFHS 59
+++ I N G + RSA F V ++IL+ R+ S G+ +VN +
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKV-DLILIPERNSVRINETVVKTSTGAIEYVNISKVTN 149
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LSD LK D + G + +++ + + +LGNEG G+ K E CD +
Sbjct: 150 LSDTINKLKKLDYWVYGAA-GEASINYNEEDYPNKIVLVLGNEGSGIRKKVREHCDKLIK 208
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
IP + G SLNV+VA+ I+L
Sbjct: 209 IPMF-GQINSLNVSVASGILLSRI 231
>gi|300772007|ref|ZP_07081877.1| SpoU family RNA methylase [Sphingobacterium spiritivorum ATCC
33861]
gi|300760310|gb|EFK57136.1| SpoU family RNA methylase [Sphingobacterium spiritivorum ATCC
33861]
Length = 177
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFR 55
I +V+ N+ HNVG+ R++ AF V ++IL G R+ + G+TS V++
Sbjct: 23 IPVVLVLDNVRSMHNVGSAFRTSDAFAVEKIILGGITGTPPHREIEK-TALGATSSVDWE 81
Query: 56 HFHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKST----AFLLGNEGMGLSAKEC 111
H L LK++ I +E + +V + H F+ S+ AF+ GNE G+ +
Sbjct: 82 HAPDLVSRLQKLKAEGYQILAIEQAEGSVML--HQFEPSSDQKYAFVFGNEVHGVDEEIM 139
Query: 112 EICDFFVYIPQYGGGTASLNVTVAASIVLHHFGV 145
+I D + IPQ+ G S N++V IVL F V
Sbjct: 140 KISDGCLEIPQF-GTKHSFNISVTIGIVLWDFVV 172
>gi|296331587|ref|ZP_06874056.1| putative RNA methylase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305675454|ref|YP_003867126.1| RNA methylase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296151182|gb|EFG92062.1| putative RNA methylase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305413698|gb|ADM38817.1| putative RNA methylase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 248
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%), Gaps = 18/138 (13%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAFG------SHGSTSHVNF--RHFHSLSDARVFL 67
N+GT+ R+A A G+ ++L G +A+ + GS H+ R+ H+ D L
Sbjct: 117 NLGTMIRTADAAGLDAVVL-GDGTADAYNGKTLRSAQGSHFHIPVVRRNLHTYVDE---L 172
Query: 68 KSKDCDICGVEITDNAV--DVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
K++ + G + + A D++Q F A ++GNEG G++A E D +Y+P YG
Sbjct: 173 KAEGVKVYGTALQNGAPYRDMSQAEF---FALIVGNEGAGVNAALLEKTDLNLYVPLYGQ 229
Query: 126 GTASLNVTVAASIVLHHF 143
SLNV +AA+I+++H
Sbjct: 230 AE-SLNVAIAAAILVYHL 246
>gi|420162181|ref|ZP_14668941.1| TrmH family tRNA/rRNA methyltransferase [Weissella koreensis KCTC
3621]
gi|394744615|gb|EJF33557.1| TrmH family tRNA/rRNA methyltransferase [Weissella koreensis KCTC
3621]
Length = 286
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ +I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 139 FLILDSIEDPHNLGSILRTADAAGVHGVIIPKRRAVQLTATVAKTSTGAIEHVPVARVTN 198
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L LK + I G ++ N D Q + + A ++GNEG G++ + D +
Sbjct: 199 LVQTVEQLKERGLWIFGTDM--NGTDYRQWDARGAVALIIGNEGKGIAQLLKKSVDEMLT 256
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++ ++ GF+ R
Sbjct: 257 IPMV-GHVQSLNASVAASLL-----IYGGFNSR 283
>gi|218135121|ref|ZP_03463925.1| hypothetical protein BACPEC_03026 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990506|gb|EEC56517.1| RNA methyltransferase, TrmH family [[Bacteroides] pectinophilus
ATCC 43243]
Length = 261
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAF---GSHGSTSHVNFRHFHS 59
YV+V N+ N+GT+ R + A GV +I+ +N + GS V F +
Sbjct: 111 YVIVENLQDPGNLGTIIRMSEAAGVDGIIMSPNTVDIYNPKTIRSTMGSLYRVPFVYADD 170
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ +KSK ++ + + +V+ T+ + K++AF++GNEG GL+ IC +
Sbjct: 171 FAGTLEQMKSKGVELYAAHL-EGSVEYTEPDYTKASAFVIGNEGNGLTDAVTNICSNRIR 229
Query: 120 IPQYGGGTASLNVTVAASIV 139
IP G SLN +AAS++
Sbjct: 230 IPM-AGKVESLNAAIAASVL 248
>gi|431895664|gb|ELK05090.1| Putative methyltransferase TARBP1 [Pteropus alecto]
Length = 280
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 15/148 (10%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHSL 60
VV I K N+G L R+ FG S ++L V R F H S S + +
Sbjct: 114 VVASLIDKAANLGGLCRTCEVFGASALVLANPQCVNDRQFQ----HLSVSAEQWLPLVEV 169
Query: 61 SDARV--FLKSKDCD---ICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
++ +L+ K + I GVE T +V +TQ+ F + + LLGNE G+ A + D
Sbjct: 170 KPPQLTDYLQQKKAEGYSIIGVEQTARSVALTQYRFPEKSLLLLGNEREGIPAALIQQLD 229
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
V IPQ G SLNV V+ ++++ +
Sbjct: 230 VCVEIPQQ-GVIRSLNVHVSGALLVWEY 256
>gi|379011842|ref|YP_005269654.1| methyltransferase [Acetobacterium woodii DSM 1030]
gi|375302631|gb|AFA48765.1| methyltransferase [Acetobacterium woodii DSM 1030]
Length = 263
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 9/145 (6%)
Query: 3 ESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF------GSHGSTSHVNFRH 56
+ ++++ +I +NVGT+ R+A A G + ++ + + + GS GS H+
Sbjct: 115 QRHILLDDIQDPYNVGTIIRTADAAGF-DCVVTSLKTADIYNEKVLRGSMGSVFHLPVFQ 173
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
SL + L+S+ I G + +++ + P S A ++GNE G+S + ++CD
Sbjct: 174 VDSLLNYAKALRSEKVTIIGTSLEGSSL-WERKPITGSFAIVMGNESKGMSKEMNQVCDI 232
Query: 117 FVYIPQYGGGTASLNVTVAASIVLH 141
+ IP G SLNV AA I+++
Sbjct: 233 LLKIPMIGRA-ESLNVATAAGIIMY 256
>gi|310778758|ref|YP_003967091.1| tRNA/rRNA methyltransferase SpoU [Ilyobacter polytropus DSM 2926]
gi|309748081|gb|ADO82743.1| tRNA/rRNA methyltransferase (SpoU) [Ilyobacter polytropus DSM 2926]
Length = 251
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV-GRRDF----NAFGSHGSTSHVNFRHFHSL 60
V++ I N+GT+ R + A G +++L+ G D S GS ++NF +
Sbjct: 106 VILDRIQDPGNLGTIIRVSDAAGYKDIVLLKGSVDVYNEKTVRSSMGSLFNMNFIYMEE- 164
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ F+ K+ + ++AV T A + GNEG G+S + E+ D V I
Sbjct: 165 DELIKFMAEKNYKSTATALREDAVSYTDIIPGSKNAIIFGNEGQGVSERLIEVSDSKVII 224
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P YG SLNV VA IVL+ F
Sbjct: 225 PIYGSA-ESLNVAVATGIVLYKF 246
>gi|54025941|ref|YP_120183.1| hypothetical protein nfa39710 [Nocardia farcinica IFM 10152]
gi|54017449|dbj|BAD58819.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 155
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 10/130 (7%)
Query: 16 NVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSH--VNFRHFHSLSDARVFLKSKDCD 73
NVGTL RSA + S + +G R + S +H + H+ + D L C
Sbjct: 18 NVGTLWRSAMTYQASMLATIGSR-YKPQASDTCRAHNAIPLHHYRDIDDLIAHLP-YGCP 75
Query: 74 ICGVEITDNAVDVTQ--HPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTASLN 131
+ GVE+ AV + + HP + +LLG E GL A + C V IP SLN
Sbjct: 76 LVGVELDARAVSLNEFTHPVR--ALYLLGAEDHGLPAAVLDRCHHVVQIPS--PSPWSLN 131
Query: 132 VTVAASIVLH 141
V+VA S+V+H
Sbjct: 132 VSVAGSLVMH 141
>gi|345876501|ref|ZP_08828269.1| putative tRNA (guanosine-2'-O-)-methyltransferase [endosymbiont of
Riftia pachyptila (vent Ph05)]
gi|344226468|gb|EGV52803.1| putative tRNA (guanosine-2'-O-)-methyltransferase [endosymbiont of
Riftia pachyptila (vent Ph05)]
Length = 203
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDARV 65
+V+ ++ NV + RSA AFG E+ LV F+ + GS V R F ++
Sbjct: 53 IVLDHMKAGFNVAKIFRSAEAFGAHEIHLVNIGPFDPSPAKGSFKKVPARFFERFEESHA 112
Query: 66 FLKSKDCDICGVEI--TDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF-FVYIPQ 122
LK + + ++ D+ +D P + AF+LG+E G S + E D + IPQ
Sbjct: 113 ELKRRGYQLITLDAGCGDSLIDT---PLPQKCAFVLGHEEFGHSFEPEEYPDIGCLSIPQ 169
Query: 123 YGGGTASLNVTVAASIVLHHF 143
+ G SLNV VAAS+V+ +
Sbjct: 170 F-GQVESLNVAVAASVVMFEY 189
>gi|258509319|ref|YP_003172070.1| RNA methyltransferase [Lactobacillus rhamnosus GG]
gi|385828955|ref|YP_005866727.1| rRNA methylase [Lactobacillus rhamnosus GG]
gi|257149246|emb|CAR88219.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
rhamnosus GG]
gi|259650600|dbj|BAI42762.1| rRNA methylase [Lactobacillus rhamnosus GG]
Length = 260
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
++++ N+ HN+G++ R+A A GV +I+ VG A S G+ +V +
Sbjct: 112 FLLLDNLEDPHNLGSILRTADASGVHGIIIPKHRAVGLTSAVAKVSTGAIEYVPVARVTN 171
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + + D Q K STA ++GNEG G+S ++ D +
Sbjct: 172 LAQTIKILKDRGMWIFGTAM--DGQDYRQWDAKGSTALVIGNEGKGISPGIAKLMDATIA 229
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAA I+++
Sbjct: 230 IP-MAGHVQSLNASVAAGILMYQ 251
>gi|317058516|ref|ZP_07923001.1| 23S rRNA methyltransferase [Fusobacterium sp. 3_1_5R]
gi|313684192|gb|EFS21027.1| 23S rRNA methyltransferase [Fusobacterium sp. 3_1_5R]
Length = 257
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-DFN----AFGSHGSTSHVNFRHFHSL 60
+++ +I N+GT+ R A G S++IL D+ S GS HVN H++
Sbjct: 109 IILDDIQDPGNLGTIIRLVDASGFSDIILTKNSVDYYNEKVVRSSMGSIFHVNL---HTM 165
Query: 61 SDARV--FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+ +LK + +I + ++++ + + AF+ GNEG G+S + EI D V
Sbjct: 166 EKIEIVDYLKKQQYNIVVTSLQEDSIPYMEMSLDERNAFVFGNEGHGVSKEFLEIADEKV 225
Query: 119 YIPQYGGGTASLNVTVAASIVLHH 142
IP G SLNV +A I+L +
Sbjct: 226 IIP-ISGQAESLNVAMALGILLFY 248
>gi|452856517|ref|YP_007498200.1| putative RNA methylase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452080777|emb|CCP22542.1| putative RNA methylase [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 248
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH--- 58
++ +++ + N+GT+ R+A A G+ ++L G + + S HFH
Sbjct: 103 LKRLLLIDAVQDPGNLGTMIRTADAAGIDAVVL-GEGTADPYNGKTLRS-AQGSHFHIPI 160
Query: 59 ---SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
L + LKS+ I G + + A + P ++S A ++GNEG G+ A + D
Sbjct: 161 LKRPLDEFTAELKSQGVTIYGTALENGAAYQSVKP-EESFALIVGNEGAGVDAGLLQKTD 219
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+Y+P YG SLNV VAA+I+++H
Sbjct: 220 LNLYVPLYGQAE-SLNVAVAAAILVYHL 246
>gi|336400093|ref|ZP_08580881.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
21_1A]
gi|336163290|gb|EGN66222.1| RNA methyltransferase, TrmH family, group 3 [Fusobacterium sp.
21_1A]
Length = 234
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I N G + RSA F V +I+ R S G+ +VN +L
Sbjct: 91 LILDEIQDPRNFGAIIRSAEVFKVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNL 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
SD LK D + G N + + + +LGNEG G+ K E CD + I
Sbjct: 151 SDTINKLKKLDYWVYGAAGEAN-IGYNEEDYPNKVVLVLGNEGSGIRKKVREHCDKLIKI 209
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P Y G SLNV+VA+ I+L
Sbjct: 210 PMY-GQINSLNVSVASGILLSRI 231
>gi|402829163|ref|ZP_10878044.1| RNA methyltransferase, TrmH family, group 3 [Slackia sp. CM382]
gi|402284917|gb|EJU33410.1| RNA methyltransferase, TrmH family, group 3 [Slackia sp. CM382]
Length = 263
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
VV+ +I N+G +ARSA G S +I+ +R + S GS +H+ +L
Sbjct: 103 VVLDHITDAGNLGAIARSAEVVGASGIIIPNKRSVSVTAATYKSSAGSINHLKIAQVANL 162
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK + G + V + P A ++GNEG G+S + CDF V +
Sbjct: 163 NAVLERLKKNGFWVAGASEQAHHT-VWKAPLYGKIALVMGNEGSGISHLMQDNCDFLVKL 221
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
PQ G SLNV A++ V++ +
Sbjct: 222 PQE-GKVGSLNVAQASTAVMYEW 243
>gi|326800579|ref|YP_004318398.1| tRNA/rRNA methyltransferase SpoU [Sphingobacterium sp. 21]
gi|326551343|gb|ADZ79728.1| tRNA/rRNA methyltransferase (SpoU) [Sphingobacterium sp. 21]
Length = 176
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 14/148 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
VV+ ++ HNVG++ R++ F V ++L G RD + G+T V +++ +
Sbjct: 22 VVLDSVRSLHNVGSVFRTSDGFAVERILLCGITGTPPHRDIEK-TALGATQSVAWQYEKN 80
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFK----KSTAFLLGNEGMGLSAKECEICD 115
+ +A + LK + I +E + + + H F +S A + GNE G+S + ++ D
Sbjct: 81 IEEAIINLKQEGKKIIAIEQAEGSTML--HRFTPVLGESYALIFGNEVNGVSEEAMKLID 138
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+ V IPQ+ G S NV ++A IVL F
Sbjct: 139 YCVEIPQF-GTKHSFNVVISAGIVLWDF 165
>gi|188995957|ref|YP_001930208.1| RNA methyltransferase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931024|gb|ACD65654.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 250
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFHS 59
+++ +I NVG++ R+A FGVS +I+ R + S G+ H+ S
Sbjct: 99 MLILDHITDPQNVGSILRTAEIFGVSGVIIPKERSSPINEVVVKASTGAVFHLPIAKVGS 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L + K K + +E ++ + F A ++G+EG G+S E D
Sbjct: 159 LRNVIEKFKKKGGWVVAIE--KGGRNIAEIDFPYPIALIVGSEGKGVSKSILEEADIIAT 216
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDG 156
IP G T SLNV+ A SI L W F R +DG
Sbjct: 217 IPMVGKIT-SLNVSNATSIAL-----WELFKRRIKDG 247
>gi|414072702|ref|ZP_11408629.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
gi|410804863|gb|EKS10901.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
Length = 228
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM--ILVGRRDFNAFGSHGSTSHVNFRHFH-SLSD 62
V + ++ K HN+ + RSA A G + + ++ + + G + + H H ++ D
Sbjct: 22 VCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPEKQKWLTNNTSGGSKNWLETHLHRNIDD 81
Query: 63 ARVFLKSKDCDI--CGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A ++ ++ +I +++ AVD + + K TA ++G E G+S K E D + I
Sbjct: 82 AVTAMRERNPEIQILATHLSEGAVDFREVDYTKPTAIIVGQEKTGISEKALEYADQNIII 141
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLNV+VAA+++L
Sbjct: 142 P-MQGMVQSLNVSVAAALIL 160
>gi|193212564|ref|YP_001998517.1| tRNA guanosine-2'-O-methyltransferase [Chlorobaculum parvum NCIB
8327]
gi|193086041|gb|ACF11317.1| tRNA guanosine-2'-O-methyltransferase [Chlorobaculum parvum NCIB
8327]
Length = 221
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH---GSTSHVNFRHFHSLSD 62
+V+ N+ K HN+ + RS A G+ ++ + RR H G++ V LSD
Sbjct: 23 LVMDNVNKPHNLAAIIRSCDAVGIHQVHAISRRSSIRTKQHTAAGASRWVKV----GLSD 78
Query: 63 ARVFLKSKDCDICGVEIT-----DNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
+ V + K + G++I +AVD + + TA ++G E G S + + D F
Sbjct: 79 SIVPVGEKIRE-AGMQILVATYRPDAVDFRSIDYTRPTAIVMGEELTGPSEEAMNLADHF 137
Query: 118 VYIPQYGGGTASLNVTVAASIVL 140
VYIP + G SLNV+VAA+++L
Sbjct: 138 VYIPMF-GMVESLNVSVAAALIL 159
>gi|119472959|ref|ZP_01614815.1| tRNA (Guanosine-2'-O-)-methyltransferase [Alteromonadales bacterium
TW-7]
gi|392540167|ref|ZP_10287304.1| tRNA guanosine-2'-O-methyltransferase [Pseudoalteromonas marina
mano4]
gi|119444628|gb|EAW25938.1| tRNA (Guanosine-2'-O-)-methyltransferase [Alteromonadales bacterium
TW-7]
Length = 228
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNF--RHFH-SLSD 62
V + ++ K HN+ + RSA A G + V + ++ S N+ H H ++ D
Sbjct: 22 VCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPENQKWLTNNTSGGSKNWLETHLHKNIDD 81
Query: 63 ARVFLK--SKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A ++ + + I ++++AVD + + K TA ++G E G+SA+ + D + I
Sbjct: 82 AATMMRQHNPNVQILATHLSEDAVDFREIDYTKPTAIIVGQEKTGISAQALKHADQNIII 141
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLNV+VAA+++L
Sbjct: 142 P-MQGMVQSLNVSVAAALIL 160
>gi|257064637|ref|YP_003144309.1| rRNA methylase , group 3 [Slackia heliotrinireducens DSM 20476]
gi|256792290|gb|ACV22960.1| rRNA methylase, putative, group 3 [Slackia heliotrinireducens DSM
20476]
Length = 256
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 9/144 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+V+ +I N+G +ARSA G S +I+ +R S G+ +H+ +L
Sbjct: 103 IVLDHITDAGNLGAIARSAEVVGASGLIIPNKRSAQVTAATYKSSAGAINHLPVAQVANL 162
Query: 61 SDARVFLKSKDCDICGVEITDNAV-DVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ A LK + G +++A V + P A ++GNE G+S E CDF V
Sbjct: 163 TGALDRLKKAGFWVAGA--SEHAQHTVWEAPLYGKIALVMGNEQEGISRLTLESCDFLVK 220
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+PQ G SLNV A++ V++ +
Sbjct: 221 LPQ-AGMVGSLNVAQASTAVMYEW 243
>gi|212705009|ref|ZP_03313137.1| hypothetical protein DESPIG_03077 [Desulfovibrio piger ATCC 29098]
gi|212671561|gb|EEB32044.1| RNA methyltransferase, TrmH family [Desulfovibrio piger ATCC 29098]
Length = 196
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNF----RHFHSL 60
+V+ NI HNV + RS AFGV ++ + F G S S + RH
Sbjct: 26 LVLANIHDPHNVSAIYRSCDAFGVDKVHLYYTDTPFPVLGRKTSASARKWVESVRH-RDR 84
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ L++++ I T A + F + TA ++GNE G++ + + D +YI
Sbjct: 85 QELETSLRAQNMQILATTFTPTAKPLRTWDFTRPTAIIMGNEHSGVNEELISMADGELYI 144
Query: 121 PQYGGGTASLNVTVAASIVL 140
P Y G S NV+VA++I+L
Sbjct: 145 PMY-GMIQSFNVSVASAIIL 163
>gi|336321858|ref|YP_004601826.1| tRNA/rRNA methyltransferase (SpoU) [[Cellvibrio] gilvus ATCC 13127]
gi|336105439|gb|AEI13258.1| tRNA/rRNA methyltransferase (SpoU) [[Cellvibrio] gilvus ATCC 13127]
Length = 234
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF E+ +VGRR +N G+ + + + RH ++D
Sbjct: 75 HVAIENWQHDLNIGSVVRTANAFLACEVHIVGRRRWNRRGAMVTDRYQHVRHHPDVADLI 134
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ S+D + GV+ +V + + ++ L G E +GLS + ++I Q+
Sbjct: 135 AWANSEDLPVLGVDNLPGSVPLEGYALPRACVLLFGQESVGLSDEARAAAVDVLHIAQF- 193
Query: 125 GGTASLN 131
G T S+N
Sbjct: 194 GSTRSIN 200
>gi|294155831|ref|YP_003560215.1| tRNA/rRNA methylase [Mycoplasma crocodyli MP145]
gi|291600376|gb|ADE19872.1| tRNA/rRNA methylase [Mycoplasma crocodyli MP145]
Length = 233
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFG---SHGSTSHVNFRHFHSL 60
+V+ +I HN+G + RSA A GV +IL R + N+ S G + F +S+
Sbjct: 86 LVLDHIQDPHNLGAVIRSANAAGVKHIILPRDRSAEINSTVIKVSSGGFIGIKFIRVNSI 145
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S +LK+ + + N+ Q + + ++GNEG G+S +CD +YI
Sbjct: 146 SATITWLKNNGFWVFSSALDKNSKKHNQINYPYKSVLVVGNEGSGVSKSTLNVCDETIYI 205
Query: 121 PQYGGGTASLNVTVAASIVL 140
Q+ G SLNV+VA I+L
Sbjct: 206 EQF-GSVQSLNVSVATGILL 224
>gi|269217194|ref|ZP_06161048.1| RNA methyltransferase, TrmH family, group 3 [Slackia exigua ATCC
700122]
gi|269129331|gb|EEZ60416.1| RNA methyltransferase, TrmH family, group 3 [Slackia exigua ATCC
700122]
Length = 263
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
VV+ +I N+G +ARSA G S +I+ +R + S GS +H+ +L
Sbjct: 103 VVLDHITDAGNLGAIARSAEVVGASGIIIPNKRSVSVTAATYKSSAGSINHLKIAQVANL 162
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK + G + V + P A ++GNEG G+S + CDF V +
Sbjct: 163 NAVLERLKKNGFWVAGASEQAHHT-VWKAPLYGKIALVMGNEGSGISHLMQDNCDFLVKL 221
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
PQ G SLNV A++ V++ +
Sbjct: 222 PQE-GKVGSLNVAQASTAVMYEW 243
>gi|158319524|ref|YP_001512031.1| RNA methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158139723|gb|ABW18035.1| RNA methyltransferase, TrmH family, group 3 [Alkaliphilus
oremlandii OhILAs]
Length = 250
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ I HN+G++ R+A A GV +I+ RR A S G+ +V ++
Sbjct: 99 LILDEIMDPHNLGSMMRTADAVGVDGIIIPKRRSVGLTSTVAKSSAGAIEYVPVAKVSNI 158
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQH---PFKKSTAFLLGNEGMGLSAKECEICDFF 117
+ +K + G +++ + +H K A ++GNEG G+S E CDF
Sbjct: 159 AQTIDKIKDMGIWVAGADMSGS----KEHYNMDLKGPLALVIGNEGEGISRLIKEKCDFL 214
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
+ +P G +SLN +VAA+++++
Sbjct: 215 IKLPMV-GQVSSLNASVAAAVLMYEV 239
>gi|333397299|ref|ZP_08479112.1| tRNA/rRNA methyltransferase [Leuconostoc gelidum KCTC 3527]
gi|406600577|ref|YP_006745923.1| TrmH family RNA methyltransferase [Leuconostoc gelidum JB7]
gi|406372112|gb|AFS41037.1| TrmH family RNA methyltransferase [Leuconostoc gelidum JB7]
Length = 253
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 106 FLILDGIEDPHNLGSILRTADAAGVHGIIIPKRRAVQLTATVAKISTGAIEHVPVARVTN 165
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L + LK + + G ++ D + K +TA ++GNEG G+S + D +
Sbjct: 166 LVNTVSELKDRGIWVFGTDMAGE--DYRRWDAKGATALIIGNEGKGISPLLKKKVDSMLT 223
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GFS R
Sbjct: 224 IPMT-GHVQSLNASVAASLLMYQ-----GFSSR 250
>gi|25029159|ref|NP_739213.1| RNA methyltransferase [Corynebacterium efficiens YS-314]
gi|259505846|ref|ZP_05748748.1| TrmH family RNA methyltransferase [Corynebacterium efficiens
YS-314]
gi|23494447|dbj|BAC19413.1| putative RNA methyltransferase [Corynebacterium efficiens YS-314]
gi|259166520|gb|EEW51074.1| TrmH family RNA methyltransferase [Corynebacterium efficiens
YS-314]
Length = 230
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF V + +VGRR +N G+ + + + H +
Sbjct: 82 HVAIENFENDANIGTVVRTANAFAVDTVHIVGRRRWNRRGAMVTDRYQHLEHHPDVHSLL 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAK-------ECEICDFF 117
V+ D + ++ T +V + + L G EG G++ + C I F
Sbjct: 142 VWALRNDLTVVAIDNTPGSVPLETAQLPERCLLLFGQEGPGVTDEARAGALMTCSIAQF- 200
Query: 118 VYIPQYGGGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 201 -------GSTRSINAGVAAGIAMHTW 219
>gi|407717719|ref|YP_006795124.1| tRNA/rRNA methyltransferase [Leuconostoc carnosum JB16]
gi|407241475|gb|AFT81125.1| tRNA/rRNA methyltransferase [Leuconostoc carnosum JB16]
Length = 253
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 106 FLILDGIEDPHNLGSIIRTADAAGVHGIIIPKRRAVQLTATVAKISTGAIEHVPVVRVTN 165
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L + LK + + G ++ D + K +TA ++GNEG GLS + D +
Sbjct: 166 LVNTVSELKDRGVWVFGTDVAGE--DYRRLDAKGATALVIGNEGKGLSPLLKKKVDGMLT 223
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++ ++ GFS R
Sbjct: 224 IPMV-GHVQSLNASVAASLL-----IYQGFSSR 250
>gi|78044128|ref|YP_361140.1| RNA methyltransferase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996243|gb|ABB15142.1| RNA methyltransferase, TrmH family, group 3 [Carboxydothermus
hydrogenoformans Z-2901]
Length = 237
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+V++++ N+G + RSA AFGV +I+ RR G S G+ V ++
Sbjct: 91 LVLNHLEDPQNLGAILRSAEAFGVHGVIIPKRRAVQVTGAVAKASAGAYLKVPVARCTNV 150
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
++ +LK K + G + A + FK A ++G E +GL++ CDF V I
Sbjct: 151 AETLRYLKEKGAWVVGADAKSKA-SLWDTDFKLPLALVIGGENVGLTSHILRECDFTVSI 209
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLN +VAA++++
Sbjct: 210 PMV-GTINSLNASVAAALLM 228
>gi|359450267|ref|ZP_09239726.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20480]
gi|358043913|dbj|GAA75975.1| tRNA (guanosine-2'-O-)-methyltransferase [Pseudoalteromonas sp.
BSi20480]
Length = 228
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNF--RHFH-SLSD 62
V + ++ K HN+ + RSA A G + V + ++ S N+ H H ++ D
Sbjct: 22 VCLEDVHKHHNLSAIVRSADAVGCHHVHAVWPENQKWLTNNTSGGSKNWLETHLHKNIDD 81
Query: 63 ARVFLK--SKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
A ++ + + I ++++AVD + + K TA ++G E G+SA+ + D + I
Sbjct: 82 AATMMRQHNPNIQILATHLSEDAVDFREIDYTKPTAIIVGQEKTGISAQALKHADQNIII 141
Query: 121 PQYGGGTASLNVTVAASIVL 140
P G SLNV+VAA+++L
Sbjct: 142 P-MQGMVQSLNVSVAAALIL 160
>gi|300173976|ref|YP_003773142.1| TrmH family RNA methyltransferase [Leuconostoc gasicomitatum LMG
18811]
gi|333445842|ref|ZP_08480784.1| tRNA/rRNA methyltransferase [Leuconostoc inhae KCTC 3774]
gi|299888355|emb|CBL92323.1| RNA methyltransferase, TrmH family, group 3 [Leuconostoc
gasicomitatum LMG 18811]
Length = 252
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 105 FLILDGIEDPHNLGSILRTADAAGVHGIIIPKRRAVQLTATVAKISTGAIEHVPVARVTN 164
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L + LK + + G ++ D + K +TA ++GNEG G+S + D +
Sbjct: 165 LVNTVSELKDRGIWVFGTDMAGE--DYRRWDAKGATALIIGNEGKGISPLLKKKVDSMLT 222
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GFS R
Sbjct: 223 IPMT-GHVQSLNASVAASLLMYQ-----GFSSR 249
>gi|293363662|ref|ZP_06610412.1| RNA methyltransferase, TrmH family, group 3 [Mycoplasma alligatoris
A21JP2]
gi|292552769|gb|EFF41529.1| RNA methyltransferase, TrmH family, group 3 [Mycoplasma alligatoris
A21JP2]
Length = 231
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 6/140 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR--DFNAFG---SHGSTSHVNFRHFHSL 60
+V+ +I HN+G + RSA A GV +IL R + N+ S G + F +S+
Sbjct: 86 LVLDHIQDPHNLGAIIRSANAAGVKHIILPRDRSAEINSTVIKVSSGGFIGIKFIRVNSV 145
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S FLK+ + + + A Q + + A ++GNEG G+S + D +YI
Sbjct: 146 SATINFLKNNNFWVYASALDKKAQAYNQVSYSEQVALIVGNEGNGVSKSTLNMADQKIYI 205
Query: 121 PQYGGGTASLNVTVAASIVL 140
Q+ G SLNV+VA I+L
Sbjct: 206 EQF-GTVQSLNVSVATGILL 224
>gi|154687000|ref|YP_001422161.1| hypothetical protein RBAM_025720 [Bacillus amyloliquefaciens FZB42]
gi|421730729|ref|ZP_16169855.1| RNA methyltransferase, TrmH family protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|451345985|ref|YP_007444616.1| TrmH family RNA methyltransferase [Bacillus amyloliquefaciens
IT-45]
gi|154352851|gb|ABS74930.1| YsgA [Bacillus amyloliquefaciens FZB42]
gi|407074883|gb|EKE47870.1| RNA methyltransferase, TrmH family protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|449849743|gb|AGF26735.1| TrmH family RNA methyltransferase [Bacillus amyloliquefaciens
IT-45]
Length = 248
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH--- 58
++ +++ + N+GT+ R+A A G+ ++L G + + S HFH
Sbjct: 103 LKRLLLIDAVQDPGNLGTMIRTADAAGIDAVVL-GEGTADPYNGKTLRS-AQGSHFHIPI 160
Query: 59 ---SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
L + LKS+ I G + + A + P ++S A ++GNEG G+ A + D
Sbjct: 161 LKRPLDEFTAELKSQGVAIYGTALENGAAYQSVKP-EESFALIVGNEGAGVDAGLLQKTD 219
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+Y+P YG SLNV VAA+I+++H
Sbjct: 220 LNLYVPLYGQAE-SLNVAVAAAILVYHL 246
>gi|406915158|gb|EKD54266.1| hypothetical protein ACD_60C00100G0003 [uncultured bacterium]
Length = 248
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
+++ NI HN+G RSA A GV +I VG A + G+ + F +
Sbjct: 100 LLILDNIQDPHNLGACLRSADAAGVHAVIAPKDKSVGLTPTVAKVASGALETIPFIQVTN 159
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
L+ LK ++ + G D A T Q F S AF+LG EG GL E CD
Sbjct: 160 LARTLRMLKERNIWVFG---ADEAAKKTLYQADFTSSAAFVLGAEGTGLRRLTREHCDML 216
Query: 118 VYIPQYGGGTASLNVTVAASIVL 140
+ IP G +SLNV+VAA + L
Sbjct: 217 LNIPMQ-GSVSSLNVSVAAGVFL 238
>gi|254525374|ref|ZP_05137426.1| RNA methyltransferase, TrmH family, group 3 [Prochlorococcus
marinus str. MIT 9202]
gi|221536798|gb|EEE39251.1| RNA methyltransferase, TrmH family, group 3 [Prochlorococcus
marinus str. MIT 9202]
Length = 326
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 11 IAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGS-----HGSTSHVNFRHFHSLSDARV 65
I HNVG + RSA AF +I+ RR G+ G+ H+ +L+ A
Sbjct: 188 ITDPHNVGAIIRSAEAFDCKGIIIPQRRSAGLTGTVAKVAAGALEHLQVSRVVNLNRALE 247
Query: 66 FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGG 125
LK I G+ D + ++ K ++G+E G+S + CDF + IP G
Sbjct: 248 MLKKNGFLIVGLS-GDGQLSLSNFSEKVPLVVIVGSEDKGISLLTQKKCDFLLSIP-LKG 305
Query: 126 GTASLNVTVAASIVLHHF 143
T+SLN +VAA+I L H
Sbjct: 306 KTSSLNASVAAAISLFHL 323
>gi|394991844|ref|ZP_10384642.1| YsgA [Bacillus sp. 916]
gi|393807389|gb|EJD68710.1| YsgA [Bacillus sp. 916]
Length = 248
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH--- 58
++ +++ + N+GT+ R+A A G+ ++L G + + + HFH
Sbjct: 103 LKRLLLIDAVQDPGNLGTMIRTADAAGIDAVVL-GEGTADPYNGK-TLRSAQGSHFHIPI 160
Query: 59 ---SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
L + LKS+ I G + + A + P ++S A ++GNEG G+ A + D
Sbjct: 161 LKRPLDEFTAELKSQGVAIYGTALENGAAYQSVKP-EESFALIVGNEGAGVDAGLLQKTD 219
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+Y+P YG SLNV VAA+I+++H
Sbjct: 220 LNLYVPLYGQAE-SLNVAVAAAILVYHL 246
>gi|347548599|ref|YP_004854927.1| putative rRNA methylase [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346981670|emb|CBW85641.1| Putative rRNA methylase [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 252
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH------S 59
++V + NVGTL R+A A G +IL GR + + S HFH +
Sbjct: 110 LLVDAVQDPGNVGTLIRTADAAGYDAVIL-GRGSADLYNPKVIRS-AQGSHFHIPVIQAN 167
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L D + L+ + + G + + A + P +++ A ++GNEG G+S + VY
Sbjct: 168 LFDWILNLEEEGVPVIGAVLDEQAKSLMDTPKRETLALMVGNEGNGISPELQARLSEKVY 227
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IP Y G + SLNV VAA I+L+
Sbjct: 228 IPIY-GDSESLNVAVAAGILLY 248
>gi|15828342|ref|NP_302605.1| RNA methyltransferase [Mycobacterium leprae TN]
gi|221230819|ref|YP_002504235.1| RNA methyltransferase [Mycobacterium leprae Br4923]
gi|13094035|emb|CAC32002.1| possible RNA methyltransferase [Mycobacterium leprae]
gi|219933926|emb|CAR72584.1| possible RNA methyltransferase [Mycobacterium leprae Br4923]
Length = 182
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF V M +VGRR +N G+ + + H S +
Sbjct: 34 HVAIENFGHDANIGSVVRTANAFAVDTMHIVGRRRWNRRGAMVTDRYQRLCHHDSTASML 93
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + V+ A + Q + + G EG G++ + V I Q+
Sbjct: 94 DFAAGAGLTVVAVDNIPGAARLEQTTLPRQCLLVFGQEGPGITDEARTGAAMIVSIAQF- 152
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 153 GSTRSINAGVAAGIAMHAW 171
>gi|374316530|ref|YP_005062958.1| rRNA methylase, putative, group 3 [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352174|gb|AEV29948.1| rRNA methylase, putative, group 3 [Sphaerochaeta pleomorpha str.
Grapes]
Length = 253
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+V+ I N+G + RS F VS +I+ RR S G+ +V ++
Sbjct: 104 LVLDEITDPQNLGAILRSCDQFSVSLVIIPERRSVQVNETVVKVSSGAAQYVPVSIVTNV 163
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ +LK+ + G ++ A T P K T ++GNEG GLS ++CD V I
Sbjct: 164 NRELEYLKANGFWVYGADMEGKASHKTVFP--KKTVLVMGNEGKGLSRLTQQLCDMLVSI 221
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VA I+L+
Sbjct: 222 PT-SGHIDSLNVSVATGILLYEI 243
>gi|357412423|ref|YP_004924159.1| tRNA/rRNA methyltransferase SpoU [Streptomyces flavogriseus ATCC
33331]
gi|320009792|gb|ADW04642.1| tRNA/rRNA methyltransferase (SpoU) [Streptomyces flavogriseus ATCC
33331]
Length = 236
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V V N N+G++ R+A AF E+ +VGRR +N G+ + + + RH +D
Sbjct: 86 HVAVENWGHDFNIGSVVRTANAFLAKEIHIVGRRRWNRRGAMVTDRYQHVRHHPDTADLT 145
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ I G++ AV + + + L G EG GL+ + E I Q+
Sbjct: 146 AWAAAEGFPIIGIDNLPGAVPLERTELPRRCVLLFGQEGPGLTEEAREHASMVCSIAQF- 204
Query: 125 GGTASLN 131
G T S+N
Sbjct: 205 GSTRSIN 211
>gi|423349300|ref|ZP_17326956.1| hypothetical protein HMPREF9156_00494 [Scardovia wiggsiae F0424]
gi|393702848|gb|EJD65050.1| hypothetical protein HMPREF9156_00494 [Scardovia wiggsiae F0424]
Length = 230
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHS----LS 61
V V N N+G++ R+A AF ++ ++G +N GS + + + + S +
Sbjct: 83 VAVENWTHDFNIGSIVRTANAFTARQVHIIGPHKWNRKGSLMTELYQDIGYHASVDEFMR 142
Query: 62 DARV--FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
D R+ +D I ++I AV + + F ++ L G+EG GL+ K E D VY
Sbjct: 143 DIRIRDAQLGQDTRIIALDIVPGAVPIESYKFPENCILLFGSEGPGLTGKALEAADDVVY 202
Query: 120 IPQYGGGTASLN 131
I QY G SLN
Sbjct: 203 ITQY-GSVRSLN 213
>gi|373956480|ref|ZP_09616440.1| tRNA/rRNA methyltransferase (SpoU) [Mucilaginibacter paludis DSM
18603]
gi|373893080|gb|EHQ28977.1| tRNA/rRNA methyltransferase (SpoU) [Mucilaginibacter paludis DSM
18603]
Length = 177
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
VV+ N+ HNVG++ R++ AF V ++ L G R+ + G+T VN++H+ S
Sbjct: 27 VVLDNVRSLHNVGSIFRTSDAFAVEQICLCGITGLPPNREIEK-TALGATQSVNWKHYPS 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQ----HPFK-KSTAFLLGNEGMGLSAKECEIC 114
DA L+ I +E AVD T P + A + GNE G++ + E
Sbjct: 86 TLDAIHQLRVDGYLIIAIE---QAVDSTMLNQFEPIPGEKYALIFGNEVNGVADEVMEQI 142
Query: 115 DFFVYIPQYGGGTASLNVTVAASIVLHHF 143
D + IPQ+ G S N+ V+A I+L F
Sbjct: 143 DGCIEIPQF-GTKHSFNIVVSAGIILWDF 170
>gi|62391607|ref|YP_227009.1| SPOU rRNA methylase [Corynebacterium glutamicum ATCC 13032]
gi|41326949|emb|CAF20793.1| SPOU RRNA METHYLASE FAMILY PROTEIN [Corynebacterium glutamicum ATCC
13032]
Length = 222
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF V+ + +VGRR +N G+ + + + H +
Sbjct: 74 HVAIENFENDANIGTVVRTANAFAVNTVHIVGRRRWNRRGAMVTDRYQHLMHHEDVDSLL 133
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ I ++ T +V + K+ L G EG G++ I Q+
Sbjct: 134 AWAIAERLTIVAIDNTPGSVPLETAELPKNCLLLFGQEGPGVTEAARAGALMTCSIAQF- 192
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 193 GSTRSINAGVAAGIAMHAW 211
>gi|365828854|ref|ZP_09370631.1| hypothetical protein HMPREF0975_02414 [Actinomyces sp. oral taxon
849 str. F0330]
gi|365261677|gb|EHM91580.1| hypothetical protein HMPREF0975_02414 [Actinomyces sp. oral taxon
849 str. F0330]
Length = 251
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
++ + N+++ N+G++ RSA AF V+ + ++GRR +N G+ + +++ RH +
Sbjct: 104 HIAIENVSQDLNIGSIVRSANAFNVAGVHIIGRRRWNKRGAMVTNRYLDVRHHPEPGELL 163
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ ++ G++ A + + + G+EG G+S++ C + I QY
Sbjct: 164 SWAAAEGYEVIGIDNGPGARLLEAAVLPERCLMVFGSEGEGISSELSAGCSRLLRIGQY- 222
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+NV AA++ +H +
Sbjct: 223 GSTRSINVAAAAAVAMHTW 241
>gi|229552882|ref|ZP_04441607.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus rhamnosus
LMS2-1]
gi|258540508|ref|YP_003175007.1| TrmH family group 3 RNA methyltransferase [Lactobacillus rhamnosus
Lc 705]
gi|385836146|ref|YP_005873921.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Lactobacillus rhamnosus ATCC 8530]
gi|421769978|ref|ZP_16206682.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
rhamnosus LRHMDP2]
gi|421773654|ref|ZP_16210294.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
rhamnosus LRHMDP3]
gi|229313751|gb|EEN79724.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus rhamnosus
LMS2-1]
gi|257152184|emb|CAR91156.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
rhamnosus Lc 705]
gi|355395638|gb|AER65068.1| RNA 2'-O ribose methyltransferase substrate binding family protein
[Lactobacillus rhamnosus ATCC 8530]
gi|411181558|gb|EKS48727.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
rhamnosus LRHMDP3]
gi|411183338|gb|EKS50477.1| TrmH family tRNA/rRNA methyltransferase YacO [Lactobacillus
rhamnosus LRHMDP2]
Length = 260
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
++++ N+ HN+G++ R+A A GV +I+ VG A S G+ +V +
Sbjct: 112 FLLLDNLEDPHNLGSILRTADASGVHGIIIPKHRAVGLTSAVAKVSTGAIEYVPVARVTN 171
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + + D Q K STA ++GNEG G+S ++ D +
Sbjct: 172 LAQTIKILKDRGMWIFGTAM--DGQDYRQWDAKGSTALVIGNEGKGISPGIAKLMDATIA 229
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAA I+++
Sbjct: 230 IPMV-GHVQSLNASVAAGILMYQ 251
>gi|418072172|ref|ZP_12709444.1| TrmH family group 3 RNA methyltransferase [Lactobacillus rhamnosus
R0011]
gi|423080359|ref|ZP_17068983.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
rhamnosus ATCC 21052]
gi|357537423|gb|EHJ21447.1| TrmH family group 3 RNA methyltransferase [Lactobacillus rhamnosus
R0011]
gi|357542701|gb|EHJ24738.1| RNA methyltransferase, TrmH family, group 3 [Lactobacillus
rhamnosus ATCC 21052]
Length = 260
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
++++ N+ HN+G++ R+A A GV +I+ VG A S G+ +V +
Sbjct: 112 FLLLDNLEDPHNLGSILRTADASGVHGIIIPKHRAVGLTSAVAKVSTGAIEYVPVARVTN 171
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + + D Q K STA ++GNEG G+S ++ D +
Sbjct: 172 LAQTIKILKDRGMWIFGTAM--DGQDYRQWDAKGSTALVIGNEGKGISPGIAKLMDATIA 229
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAA I+++
Sbjct: 230 IPMV-GHVQSLNASVAAGILMYQ 251
>gi|237756237|ref|ZP_04584798.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237691595|gb|EEP60642.1| RNA methyltransferase, TrmH family, group 3 [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 248
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 13/158 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRR-----DFNAFGSHGSTSHVNFRHFHS 59
+++ +I NVG++ R+A FGVS +I+ R + S G+ H+ S
Sbjct: 97 MLILDHITDPQNVGSILRTAEIFGVSGVIIPKERSSPINEVVIKASTGAVFHLPIAKVGS 156
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L + K K + VE ++ + F A ++G+EG G+S E D
Sbjct: 157 LRNVIEKFKKKGGWVVAVE--KGGRNIAEIDFPYPIALVVGSEGKGVSKSILEEADIIAT 214
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGN 157
IP G T SLNV+ A SI L W F R +DG
Sbjct: 215 IPMVGKIT-SLNVSNATSIAL-----WELFKRRIKDGK 246
>gi|152993149|ref|YP_001358870.1| tRNA/rRNA methyltransferase [Sulfurovum sp. NBC37-1]
gi|151425010|dbj|BAF72513.1| tRNA/rRNA methyltransferase [Sulfurovum sp. NBC37-1]
Length = 258
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 10/145 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMIL-------VGRRDFNAFGSHGSTSHVNFRHFH 58
+++ I+ N+G++ARSA A V ++L RR S G + F +
Sbjct: 114 IMLDEISNTDNIGSIARSAAALDVGSLLLPRQGPHPYARRALRV--SMGHIGKLKFHRYD 171
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
++ + LK I E+T ++ ++Q A L+G+E +G+S + +CD V
Sbjct: 172 NIKETIQKLKKMGYRIFAAEVTKDSTPLSQVRVPGKWALLMGHEQLGISDEILALCDEVV 231
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
I + G S NV VAASI+++ F
Sbjct: 232 TI-EMEEGIKSFNVAVAASIMMYRF 255
>gi|393198921|ref|YP_006460763.1| rRNA methylase [Solibacillus silvestris StLB046]
gi|327438252|dbj|BAK14617.1| rRNA methylase [Solibacillus silvestris StLB046]
Length = 287
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A G +I+ RR A S G+ HV +
Sbjct: 137 FLILDELEDPHNLGSIMRTADAIGAHGIIIPKRRAVGLTAVVAKASTGAIEHVPVVRVTN 196
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + +A D + A ++G+EG G+S + CDF +
Sbjct: 197 LAQTVDELKDRGVWIAGTDAKGSA-DYRKMDATLPLALIIGSEGKGMSRLLKDKCDFLYH 255
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAA+++++
Sbjct: 256 LPMVGHVT-SLNASVAAALLMYE 277
>gi|322436781|ref|YP_004218993.1| TrmH family RNA methyltransferase [Granulicella tundricola
MP5ACTX9]
gi|321164508|gb|ADW70213.1| RNA methyltransferase, TrmH family, group 3 [Granulicella
tundricola MP5ACTX9]
Length = 263
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
++ + + HN+G L RSA GV ++L RR G S G++ HV +
Sbjct: 99 FLALDGVEDPHNLGALLRSADGAGVDGVVLPDRRSAPLSGVVAKTSAGASEHVKIARVTN 158
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L + +K + + G++ D T F +LG+EG GL + CD +
Sbjct: 159 LVRSLEQMKRANIWVLGLD-ERGTPDYTAFDFNSDCVLVLGSEGTGLHDLTKKTCDHLLR 217
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G +SLNV+VA ++V++
Sbjct: 218 IP-MAGSVSSLNVSVAGAVVMYE 239
>gi|116072278|ref|ZP_01469545.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. BL107]
gi|116064800|gb|EAU70559.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. BL107]
Length = 229
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILV---GR-RDFNAFGSHGSTSHVNFRH 56
M + V++ ++ K HN+ + RS A G E V GR R +N+ + GS V
Sbjct: 19 MADLTVLLEHVEKPHNLSAILRSCDAVGALEAHAVSFSGRPRTYNS-TAQGSQKWVPLND 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ A LK+K + G + NA D F TAF+LG E GLS + ++ D
Sbjct: 78 HPDIETAIKVLKAKGFRLYGTHLGTNARDYRDCDFTGPTAFVLGAEKWGLSDQARDLMDE 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
++IP G SLNV+VA + +L
Sbjct: 138 ALFIPMR-GMVQSLNVSVATATLL 160
>gi|227513728|ref|ZP_03943777.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus buchneri
ATCC 11577]
gi|227083047|gb|EEI18359.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus buchneri
ATCC 11577]
Length = 255
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
+V++ NI HN+G++ R+A A GVS +I+ VG A S G+ V +
Sbjct: 105 FVILDNIEDPHNLGSIIRTADAAGVSGIIIPKHRAVGLTAVVAKTSAGAIERVPVARVTN 164
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + + G +I D + + S A ++GNEG G+S + D +
Sbjct: 165 LAATIKELKGRGMWVFGTDI--EGTDYRRWDARGSVAIIIGNEGKGISPLIKKQVDEMLT 222
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GF+ R
Sbjct: 223 IPMV-GDIQSLNASVAASVLIYQ-----GFNSR 249
>gi|224534903|ref|ZP_03675472.1| tRNA/rRNA methyltransferase [Borrelia spielmanii A14S]
gi|224513843|gb|EEF84168.1| tRNA/rRNA methyltransferase [Borrelia spielmanii A14S]
Length = 218
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 13/183 (7%)
Query: 7 VVHNIAKRHNVGTLARSATAFGVSEMILVGRRD---FNAFGSHGSTSHVNFRHFHSLSDA 63
V+ +I + HN R+ G+S++ ++ + + N + GS+ +N + + A
Sbjct: 38 VLEDIFQPHNASATIRTGEILGLSDVHIIEKNNKCTLNPDITLGSSQWINLNKYKNTKLA 97
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LKS I + + +V++ P A G E GLSA+ D V IP Y
Sbjct: 98 IDRLKSNGYIIVATSLNEQSVNLENFPINNKMAVFFGTELTGLSAEVLGAADLCVKIPMY 157
Query: 124 GGGTASLNVTVAASIVLHHFGVWAGFSERTRD-GNKYVVAERSARQVRRSFC--AEKPES 180
G T S N++VA +IV++ + R R+ G Y++ E +R + A K
Sbjct: 158 -GFTQSYNISVAVAIVIYSLLI------RLRESGVDYLLNEVEKSNLRLKYYRQAVKNYQ 210
Query: 181 IIE 183
IIE
Sbjct: 211 IIE 213
>gi|227522455|ref|ZP_03952504.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus hilgardii
ATCC 8290]
gi|227090407|gb|EEI25719.1| TrmH family tRNA/rRNA methyltransferase [Lactobacillus hilgardii
ATCC 8290]
Length = 255
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
+V++ NI HN+G++ R+A A GVS +I+ VG A S G+ V +
Sbjct: 105 FVILDNIEDPHNLGSIIRTADAAGVSGIIIPKHRAVGLTAVVAKTSAGAIERVPVARVTN 164
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + + G +I D + + S A ++GNEG G+S + D +
Sbjct: 165 LAATIKELKGRGMWVFGTDI--EGTDYRRWDARGSVAIIIGNEGKGISPLIKKQVDEMLT 222
Query: 120 IPQYGGGTASLNVTVAASIVLHHFGVWAGFSER 152
IP G SLN +VAAS++++ GF+ R
Sbjct: 223 IPMV-GDIQSLNASVAASVLIYQ-----GFNSR 249
>gi|336112779|ref|YP_004567546.1| TrmH family RNA methyltransferase [Bacillus coagulans 2-6]
gi|335366209|gb|AEH52160.1| RNA methyltransferase, TrmH family, group 3 [Bacillus coagulans
2-6]
Length = 247
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSL 60
+++ + HN+G++ R+A A G +I+ RR A S G+ H+ +L
Sbjct: 98 LILDELEDPHNLGSILRTADAVGAHGVIIPKRRSVALTATVAKASTGAIEHIPVARVTNL 157
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
S LK + I G + + D Q ++G+EG G+S E CDF + +
Sbjct: 158 SQTIAGLKQQGLWIAGTDAS-GTTDYRQMDADLPLGLVIGSEGRGMSRIVKEACDFLIRL 216
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G T SLN +VAA ++++
Sbjct: 217 PMAGHVT-SLNASVAAGLLMYEV 238
>gi|170741100|ref|YP_001769755.1| tRNA/rRNA methyltransferase SpoU [Methylobacterium sp. 4-46]
gi|168195374|gb|ACA17321.1| tRNA/rRNA methyltransferase (SpoU) [Methylobacterium sp. 4-46]
Length = 268
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 7/145 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHS 59
+ + I HNVG + R+A AF V+ ++ R A G + G HV F +
Sbjct: 123 LLALDQITDPHNVGAIVRTAAAFAVTAIVTTARHSPAATGVLAKSASGGLEHVPFITVRN 182
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L++A + + G++ ++ V +++ + +LG EG GL + E CD
Sbjct: 183 LAEALIRFGEQGFTRIGLD-SEAPVPLSEVTPTRPLVIVLGAEGKGLRQRTRECCDVMAR 241
Query: 120 IPQYGGGTASLNVTVAASIVLHHFG 144
+ + G SLNV+ AA+I L+
Sbjct: 242 L-DFPGAIKSLNVSNAAAITLYALA 265
>gi|78185144|ref|YP_377579.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. CC9902]
gi|78169438|gb|ABB26535.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. CC9902]
Length = 229
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILV---GR-RDFNAFGSHGSTSHVNFRH 56
M + V++ ++ K HN+ + RS A G E V GR R +N+ + GS V
Sbjct: 19 MADLTVLLEHVEKPHNLSAILRSCDAVGALEAHAVSFSGRPRTYNS-TAQGSQKWVPLND 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ A LK+K + G + NA D F TAF+LG E GLS + ++ D
Sbjct: 78 HPDIETAIKVLKAKGFRLYGTHLGTNAKDYRDCDFTGPTAFVLGAEKWGLSDQARDLMDE 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
++IP G SLNV+VA + +L
Sbjct: 138 ALFIPMR-GMVQSLNVSVATATLL 160
>gi|325287947|ref|YP_004263737.1| tRNA/rRNA methyltransferase SpoU [Cellulophaga lytica DSM 7489]
gi|324323401|gb|ADY30866.1| tRNA/rRNA methyltransferase (SpoU) [Cellulophaga lytica DSM 7489]
Length = 152
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 8 VHNIAKRHNVGTLARSATAFGVSEMILVGRR-DFNAFGSHGSTSHVNFRHFHSLSDARVF 66
+ N N+G L R+A G S + +G R A +H + + + H+++ +D +
Sbjct: 14 IQNGKTPENLGVLWRTAQNLGASFIFTIGNRYAKQACDTHNAVKSIPYYHYNTFNDFKNN 73
Query: 67 LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGG 126
+ I GVE+ D AVD+ + +LLG E GLS + E F V
Sbjct: 74 IPV-GTRIVGVELDDTAVDLETFEHPRRCVYLLGAEDHGLSKEAIEESHFLVKFKS---- 128
Query: 127 TASLNVTVAASIVLH 141
T SLNV VA SIVL+
Sbjct: 129 TLSLNVAVAGSIVLY 143
>gi|315640649|ref|ZP_07895754.1| TrmH family RNA methyltransferase [Enterococcus italicus DSM 15952]
gi|315483588|gb|EFU74079.1| TrmH family RNA methyltransferase [Enterococcus italicus DSM 15952]
Length = 251
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Query: 4 SYVVVHNIAKRHNVGTLARSATAFGVSEMIL-VGRRDFNAFGS----HGSTSHVNFRHFH 58
++++ N+ NVGT+ R+A A G + + L G D + GS H+ ++
Sbjct: 108 KWLLLDNVQDPGNVGTMIRTADAAGFTGVFLGEGTADIYNLKTLRSMQGSHFHIEIQN-G 166
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
++ D K + G E+ + AV A ++GNEG G++ + D +
Sbjct: 167 TIQDICQVFKEVGIPVYGSELNEQAVAYDTVEKTDQVALIMGNEGQGVAKEILAQTDANL 226
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
YIP YG SLNV +AA I+++HF
Sbjct: 227 YIPIYGKAE-SLNVGIAAGILMYHF 250
>gi|307942542|ref|ZP_07657890.1| RNA methyltransferase [Roseibium sp. TrichSKD4]
gi|307774181|gb|EFO33394.1| RNA methyltransferase [Roseibium sp. TrichSKD4]
Length = 181
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V ++K+ N+GTL RSA AFG + V R + S H+ ++ S+
Sbjct: 7 VGAEGLSKKMNLGTLMRSAHAFGANFFFTVDAAQNLRKVPPTDTSKSPGHLPLFNWDSVD 66
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQ--HPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+ K C + GVE+TD ++D+ HP + A++LG E LS + + CD +
Sbjct: 67 TMEL---PKGCQLVGVELTDESIDLPSFGHPLQ--AAYVLGPERGSLSPQMLDRCDHVIK 121
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IP +NV +A +IV++
Sbjct: 122 IPT----KFCINVAMAGAIVMY 139
>gi|406666948|ref|ZP_11074711.1| Putative TrmH family tRNA/rRNA methyltransferase [Bacillus
isronensis B3W22]
gi|405385231|gb|EKB44667.1| Putative TrmH family tRNA/rRNA methyltransferase [Bacillus
isronensis B3W22]
Length = 287
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A A G +I+ RR A S G+ HV +
Sbjct: 137 FLILDELEDPHNLGSIMRTADAIGAHGIIIPKRRAVGLTAVVAKASTGAIEHVPVVRVTN 196
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + +A D + A ++G+EG G+S + CDF +
Sbjct: 197 LAQTVDELKDRGVWIAGTDAKGSA-DYRKMDATLPLALIIGSEGKGMSRLLKDKCDFLYH 255
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAA+++++
Sbjct: 256 LPMVGHVT-SLNASVAAALLMYE 277
>gi|228912831|ref|ZP_04076478.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228925345|ref|ZP_04088441.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931594|ref|ZP_04094500.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943898|ref|ZP_04106283.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228983347|ref|ZP_04143560.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089223|ref|ZP_04220504.1| tRNA/rRNA methyltransferase [Bacillus cereus Rock3-42]
gi|229119754|ref|ZP_04249015.1| tRNA/rRNA methyltransferase [Bacillus cereus 95/8201]
gi|229153870|ref|ZP_04282000.1| tRNA/rRNA methyltransferase [Bacillus cereus ATCC 4342]
gi|229182486|ref|ZP_04309737.1| tRNA/rRNA methyltransferase [Bacillus cereus BGSC 6E1]
gi|228600941|gb|EEK58510.1| tRNA/rRNA methyltransferase [Bacillus cereus BGSC 6E1]
gi|228629551|gb|EEK86248.1| tRNA/rRNA methyltransferase [Bacillus cereus ATCC 4342]
gi|228663655|gb|EEL19234.1| tRNA/rRNA methyltransferase [Bacillus cereus 95/8201]
gi|228694062|gb|EEL47744.1| tRNA/rRNA methyltransferase [Bacillus cereus Rock3-42]
gi|228776337|gb|EEM24690.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228815731|gb|EEM61967.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228828022|gb|EEM73750.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834267|gb|EEM79808.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228846767|gb|EEM91772.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 175
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +I+ RR A S G+ ++ +
Sbjct: 25 FLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTN 84
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + I G + D K ++G+EG G+S E CDF +
Sbjct: 85 LSRTIDELKERGLWIAGTD-AKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLIT 143
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAAS++++
Sbjct: 144 LPMVGKVT-SLNASVAASLLMYE 165
>gi|312141301|ref|YP_004008637.1| tRNA/rRNA methyltransferase [Rhodococcus equi 103S]
gi|311890640|emb|CBH49959.1| putative tRNA/rRNA methyltransferase [Rhodococcus equi 103S]
Length = 233
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H L +
Sbjct: 85 HVAIENFAHDSNIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLVHHTDLDELA 144
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ T +V + + L G EG G++ + + V I Q+
Sbjct: 145 AFARENGLTVVAVDNTPGSVPIETVELPRDCLLLFGQEGPGVTEQGHAVASMTVSIAQF- 203
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 204 GSTRSINAGVAAGIAMHTW 222
>gi|152968115|ref|YP_001363899.1| tRNA/rRNA methyltransferase SpoU [Kineococcus radiotolerans
SRS30216]
gi|151362632|gb|ABS05635.1| tRNA/rRNA methyltransferase (SpoU) [Kineococcus radiotolerans
SRS30216]
Length = 212
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V V N N+G++ R+A A + +VGR+ +N G+ + ++ H ++D
Sbjct: 64 HVAVENWQHDANIGSVVRTANAVNAAGAHVVGRKRWNRRGAMVTDRYLTVHHHGDVADLV 123
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + I G++ + +V + + + L G EG GLS + C + I Q+
Sbjct: 124 AWARERGLPIVGIDNVEGSVPLETYDLPRECVLLFGQEGPGLSEEAVAACVDVLAIAQF- 182
Query: 125 GGTASLNV 132
G T SLNV
Sbjct: 183 GSTRSLNV 190
>gi|399515869|ref|ZP_10757504.1| TrmH family tRNA/rRNA methyltransferase YacO [Leuconostoc
pseudomesenteroides 4882]
gi|398649368|emb|CCJ65531.1| TrmH family tRNA/rRNA methyltransferase YacO [Leuconostoc
pseudomesenteroides 4882]
Length = 249
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A GV +I+ RR A S G+ HV +
Sbjct: 102 FLILDGIEDPHNLGSILRTADAAGVHGIIIPKRRAVQLTATVAKTSTGAIEHVPVARVTN 161
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G +++ D K +TA ++GNEG G+S + D +
Sbjct: 162 LATVVESLKKRGVWIFGTDMSGE--DYRHWDAKGATALIIGNEGKGISPLLKKKVDGMLT 219
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAAS++++
Sbjct: 220 IPMI-GHVQSLNASVAASLLIYQ 241
>gi|384266417|ref|YP_005422124.1| TrmH family RNA methyltransferase [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387899455|ref|YP_006329751.1| RNA methyltransferase [Bacillus amyloliquefaciens Y2]
gi|380499770|emb|CCG50808.1| RNA methyltransferase, TrmH family [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|387173565|gb|AFJ63026.1| RNA methyltransferase [Bacillus amyloliquefaciens Y2]
Length = 257
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH--- 58
++ +++ + N+GT+ R+A A G+ ++L G + + S HFH
Sbjct: 112 LKRLLLIDAVQDPGNLGTMIRTADAAGIDAVVL-GEGTADPYNGKTLRS-AQGSHFHIPI 169
Query: 59 ---SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
L + LKS+ I G + + A + P ++S A ++GNEG G+ A + D
Sbjct: 170 LKRPLDEFTAELKSQGVAIYGTALENGAAYQSVKP-EESFALIVGNEGAGVDAGLLQKTD 228
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+Y+P YG SLNV VAA+I+++H
Sbjct: 229 LNLYVPLYGQAE-SLNVAVAAAILVYHL 255
>gi|375363279|ref|YP_005131318.1| TrmH family RNA methyltransferase [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|371569273|emb|CCF06123.1| RNA methyltransferase, TrmH family [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
Length = 257
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH--- 58
++ +++ + N+GT+ R+A A G+ ++L G + + S HFH
Sbjct: 112 LKRLLLIDAVQDPGNLGTMIRTADAAGIDAVVL-GEGTADPYNGKTLRS-AQGSHFHIPI 169
Query: 59 ---SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
L + LKS+ I G + + A + P ++S A ++GNEG G+ A + D
Sbjct: 170 LKRPLDEFTAELKSQGVAIYGTALENGAAYQSVKP-EESFALIVGNEGAGVDAGLLQKTD 228
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+Y+P YG SLNV VAA+I+++H
Sbjct: 229 LNLYVPLYGQAE-SLNVAVAAAILVYHL 255
>gi|114798567|ref|YP_761999.1| RNA methyltransferase [Hyphomonas neptunium ATCC 15444]
gi|114738741|gb|ABI76866.1| RNA methyltransferase, TrmH family [Hyphomonas neptunium ATCC
15444]
Length = 177
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 11 IAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLSDARVF 66
I+K N+G L R+A AFG S + + ++ A + S + + + SL D ++
Sbjct: 12 ISKPMNLGALMRTAHAFGASFVFSIDAERNLKEAYAADTSKSAGQIPYYQWDSLDDMQL- 70
Query: 67 LKSKDCDICGVEITDNAVDVT--QHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
K C + G+E+TD+AV++ +HP A++LG E LSA+ C V IP
Sbjct: 71 --PKGCQLVGIELTDDAVELPVFRHP--PQAAYILGPEKGNLSAEAVARCAHVVKIPT-- 124
Query: 125 GGTASLNVTVAASIVLH 141
+NV++A ++V++
Sbjct: 125 --RFCINVSLAGALVMY 139
>gi|86142740|ref|ZP_01061179.1| spoU protein [Leeuwenhoekiella blandensis MED217]
gi|85830772|gb|EAQ49230.1| spoU protein [Leeuwenhoekiella blandensis MED217]
Length = 217
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV----GRRDFNAFGSHGSTSHVNFRHFHSLS 61
V + ++ HN + RS AFGV ++ ++ G+R + + G+ + + + S
Sbjct: 34 VAIEDVGHLHNTSAVMRSCDAFGVQDIHVIEELKGKR-IDREIAMGAQKWTSVKRYDSTK 92
Query: 62 DARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIP 121
+A LKS+ I A + K TA G+E GL+ E D ++YIP
Sbjct: 93 NALAKLKSEGYQIVATTPHHTAHKLEDFKLDKPTALFFGSEKDGLTETVIEAADEYIYIP 152
Query: 122 QYGGGTASLNVTVAASIVLHHF 143
+ G T SLN++V A+I+L
Sbjct: 153 TF-GFTQSLNISVCAAILLQEL 173
>gi|385265756|ref|ZP_10043843.1| SpoU rRNA Methylase family protein [Bacillus sp. 5B6]
gi|385150252|gb|EIF14189.1| SpoU rRNA Methylase family protein [Bacillus sp. 5B6]
Length = 257
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH--- 58
++ +++ + N+GT+ R+A A G+ ++L G + + S HFH
Sbjct: 112 LKRLLLIDAVQDPGNLGTMIRTADAAGIDAVVL-GEGTADPYNGKTLRS-AQGSHFHIPI 169
Query: 59 ---SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICD 115
L + LKS+ I G + + A + P ++S A ++GNEG G+ A + D
Sbjct: 170 LKRPLDEFTAELKSQGVAIYGTALENGAAYQSVKP-EESFALIVGNEGAGVDAGLLQKTD 228
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+Y+P YG SLNV VAA+I+++H
Sbjct: 229 LNLYVPLYGQAE-SLNVAVAAAILVYHL 255
>gi|334335850|ref|YP_004541002.1| tRNA/rRNA methyltransferase SpoU [Isoptericola variabilis 225]
gi|334106218|gb|AEG43108.1| tRNA/rRNA methyltransferase (SpoU) [Isoptericola variabilis 225]
Length = 213
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+G++ R+A AF V+ + +VGRR +N G+ + +++ H +
Sbjct: 71 HVAIENWAHDLNIGSVVRTANAFNVAGVHVVGRRRWNRRGAMVTDRYLHVHHHPDAASLA 130
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + G++ +V + + L G E GL+ + + C V+I Q+
Sbjct: 131 AWARDEGLPVVGIDNVPGSVPLETYRLPARCVLLFGQESAGLTPEAQDACTAVVHITQH- 189
Query: 125 GGTASLN 131
G T SLN
Sbjct: 190 GSTRSLN 196
>gi|298247217|ref|ZP_06971022.1| tRNA/rRNA methyltransferase (SpoU) [Ktedonobacter racemifer DSM
44963]
gi|297549876|gb|EFH83742.1| tRNA/rRNA methyltransferase (SpoU) [Ktedonobacter racemifer DSM
44963]
Length = 291
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRR----DFNAF-GSHGSTSHVNFRHFHSL 60
VV A N+GT+ RS A +IL G D S GS + S
Sbjct: 123 VVFDRPASPGNLGTIIRSCDALEAHGLILTGHAVDLYDPETISASTGSFFALPTVRLPSQ 182
Query: 61 SDARVFLKSKDCDICGVEI--TDNAVD--VTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
D +L+S + ++I TD + ++QH F T ++GNE G+SA E+CD
Sbjct: 183 RDIEPWLQSAKKKLGALQIIGTDEKAEQEISQHDFTVPTVLIVGNETWGMSAAYKELCDA 242
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHFGVWAGFSER---TRDGNKYVV 161
V IP G + SLNV A SI L+ + R T NK VV
Sbjct: 243 VVQIPLVGSAS-SLNVACATSICLYEVSRQRRLASRASSTSQPNKTVV 289
>gi|199598532|ref|ZP_03211949.1| rRNA methylase [Lactobacillus rhamnosus HN001]
gi|199590574|gb|EDY98663.1| rRNA methylase [Lactobacillus rhamnosus HN001]
Length = 260
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHS 59
++++ N+ HN+G++ R+A A GV +I+ VG A S G+ +V +
Sbjct: 112 FLLLDNLEDPHNLGSILRTADASGVHGIIIPKHRAVGLTSAVAKVSTGAIEYVPVARVTN 171
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
L+ LK + I G + + D Q K STA ++GNEG G+S ++ D +
Sbjct: 172 LAQTIKILKDRGMWIFGTAM--DGQDYRQWDAKGSTAIVIGNEGKGISPGIAKLMDATIA 229
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
IP G SLN +VAA I+++
Sbjct: 230 IPMV-GHVQSLNASVAAGILMYQ 251
>gi|148240118|ref|YP_001225505.1| tRNA (guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
7803]
gi|147848657|emb|CAK24208.1| tRNA (Guanosine-2'-O-)-methyltransferase [Synechococcus sp. WH
7803]
Length = 229
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSEMILV---GR-RDFNAFGSHGSTSHVNFRH 56
M + V+V ++ K HN+ + RS A GV E V GR R FN+ + GS V R
Sbjct: 19 MADLTVLVEHVEKPHNLSAILRSCDAVGVLEAHAVSFSGRPRTFNS-TAQGSQRWVPLRD 77
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+++ A LK + + G + +A D F AF+LG E GL+ + + D
Sbjct: 78 HATIASAVHHLKDRGFKLYGTNLGVDARDYRDCDFTGPCAFVLGAEKWGLTEEATGLMDQ 137
Query: 117 FVYIPQYGGGTASLNVTVAASIVL 140
V+IP G SLNV+VA + +L
Sbjct: 138 AVFIPMR-GMVQSLNVSVATATLL 160
>gi|422415702|ref|ZP_16492659.1| rRNA methyltransferase [Listeria innocua FSL J1-023]
gi|313624066|gb|EFR94149.1| rRNA methyltransferase [Listeria innocua FSL J1-023]
Length = 252
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH-SLSDAR 64
++V + NVGTL R+A A G + +++GR + + S HFH + A
Sbjct: 110 LLVDAVQDPGNVGTLIRTADAAGY-DCVVLGRGSADLYNPKVIRS-TQGSHFHIPVIQAD 167
Query: 65 VF-----LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+F L+ + + G + D A + P +++ A ++GNEG G+S + + VY
Sbjct: 168 LFEWVGNLEEEGVPVIGAVLDDQAKSLNDMPKRETLALMVGNEGNGISEELQDRLSEKVY 227
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IP Y G + SLNV VAA I+L+
Sbjct: 228 IPIY-GDSESLNVAVAAGILLY 248
>gi|254450751|ref|ZP_05064188.1| RNA methyltransferase, TrmH family, group 3 [Octadecabacter
arcticus 238]
gi|198265157|gb|EDY89427.1| RNA methyltransferase, TrmH family, group 3 [Octadecabacter
arcticus 238]
Length = 263
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
V++ + HNVG + RSA FG +I + R G + G+ + +L
Sbjct: 117 VLLDKVTDPHNVGAILRSAEVFGAQAVIAMNRHAAPETGALAKTASGAMERQPYLRVRNL 176
Query: 61 SDARVFLKSKDCDICGV--EITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+DA V L++ + G+ E V + ++ A +LG EG GL K E CD V
Sbjct: 177 ADAIVELQAMGYLVLGLDGEAEQTIEQVVEGKRDRAIALVLGAEGPGLRDKTKETCDALV 236
Query: 119 YIPQYGGGTASLNVTVAASIVLH 141
I + G SLNV+ AA++ L+
Sbjct: 237 RI-DFAGEFGSLNVSNAAAVALY 258
>gi|16800250|ref|NP_470518.1| hypothetical protein lin1181 [Listeria innocua Clip11262]
gi|422412668|ref|ZP_16489627.1| rRNA methyltransferase [Listeria innocua FSL S4-378]
gi|16413640|emb|CAC96412.1| lin1181 [Listeria innocua Clip11262]
gi|313619318|gb|EFR91052.1| rRNA methyltransferase [Listeria innocua FSL S4-378]
Length = 252
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 9/142 (6%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH-SLSDAR 64
++V + NVGTL R+A A G + +++GR + + S HFH + A
Sbjct: 110 LLVDAVQDPGNVGTLIRTADAAGY-DCVVLGRGSADLYNPKVIRS-TQGSHFHIPVIQAD 167
Query: 65 VF-----LKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
+F L+ + + G + D A + P +++ A ++GNEG G+S + + VY
Sbjct: 168 LFEWVANLEEEGVPVIGAVLDDQAKSLNDMPKRETLALMVGNEGNGISEELQDRLSEKVY 227
Query: 120 IPQYGGGTASLNVTVAASIVLH 141
IP Y G + SLNV VAA I+L+
Sbjct: 228 IPIY-GDSESLNVAVAAGILLY 248
>gi|410027898|ref|ZP_11277734.1| rRNA methylase [Marinilabilia sp. AK2]
Length = 181
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 14/153 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVG------RRDFNAFGSHGSTSHVNFRHFHS 59
+V+ N+ +NVG+ R++ AF + ++ L G R+ + G+T V++ +F S
Sbjct: 27 IVLDNVRSLNNVGSAFRTSDAFLIKKIFLCGITGKPPHREIQK-TALGATESVDWEYFDS 85
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPF----KKSTAFLLGNEGMGLSAKECEICD 115
A LK IC +E TD +V + H F ++ A + GNE G+ K + D
Sbjct: 86 TLAAIKKLKEDGYKICSLEQTDQSVPL--HTFIPQQEEKYALIFGNEVFGVEEKLIKESD 143
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHFGVWAG 148
+ IPQ G SLN++V+ I + F V G
Sbjct: 144 HVIEIPQL-GTKHSLNISVSLGIAIWDFTVKLG 175
>gi|239989083|ref|ZP_04709747.1| putative RNA methyltransferase [Streptomyces roseosporus NRRL
11379]
Length = 233
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V V N N+G++ R+A AF E+ +VGRR +N G+ + + + RH +D
Sbjct: 82 HVAVENWTHDFNIGSVVRTANAFLAKEIHIVGRRRWNRRGAMVTDRYQHVRHHSDTADLT 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ I G++ AV + + + L G EG GL+ + E I Q+
Sbjct: 142 AWATAEGLPIIGIDNLPGAVPLERTELPRRCVLLFGQEGPGLTEEAREHATAVCSIAQF- 200
Query: 125 GGTASLN 131
G T S+N
Sbjct: 201 GSTRSIN 207
>gi|269926933|ref|YP_003323556.1| TrmH family RNA methyltransferase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790593|gb|ACZ42734.1| RNA methyltransferase, TrmH family, group 3 [Thermobaculum terrenum
ATCC BAA-798]
Length = 264
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAF-----GSHGSTSHVNFRHFHSL 60
+++ ++ N GTL R+A FG+ +I+ R S G+T H+N +L
Sbjct: 116 LMLDSLQDPQNFGTLLRTAEVFGIGAVIIPEHRSVEVTPAVVNASSGATEHLNISKVTNL 175
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK + G+E +++ + + ++G+EG G+ + CD V I
Sbjct: 176 ARTASKLKEYGYWVLGLEYDESSSVIWDVDLRIPICLVVGSEGSGIRELVRKRCDLLVKI 235
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
PQ G SLN VA SI L+
Sbjct: 236 PQ-AGRIGSLNAAVAGSIALYEI 257
>gi|325673864|ref|ZP_08153554.1| TrmH family RNA methyltransferase [Rhodococcus equi ATCC 33707]
gi|325555129|gb|EGD24801.1| TrmH family RNA methyltransferase [Rhodococcus equi ATCC 33707]
Length = 233
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H L +
Sbjct: 85 HVAIENFAHDSNIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHLVHHTDLDELA 144
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
F + + V+ T +V + + L G EG G++ + + V I Q+
Sbjct: 145 AFARENGLTVVAVDNTPGSVPIETVELPRDCLLLFGQEGPGVTEQGHAVASMTVSIAQF- 203
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 204 GSTRSINAGVAAGIAMHTW 222
>gi|423421742|ref|ZP_17398831.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
BAG3X2-1]
gi|401096861|gb|EJQ04898.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
BAG3X2-1]
Length = 247
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +I+ RR A S G+ ++ +
Sbjct: 97 FLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVTRVTN 156
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + I G + D K ++G+EG G+S E CDF +
Sbjct: 157 LSRTIDELKERGLWIAGTD-AKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLIT 215
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+P G T SLN +VAAS++++
Sbjct: 216 LPMVGKVT-SLNASVAASLLMYEV 238
>gi|319651786|ref|ZP_08005912.1| 23S rRNA methyltransferase [Bacillus sp. 2_A_57_CT2]
gi|317396605|gb|EFV77317.1| 23S rRNA methyltransferase [Bacillus sp. 2_A_57_CT2]
Length = 250
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFH------ 58
++++ + N+GT+ R+A A G+ + ++VG +A+ S HFH
Sbjct: 108 FLLIDAVQDPGNLGTMIRTADAAGI-DAVIVGEGSVDAYNPKVLRS-AQGSHFHLPVLRG 165
Query: 59 SLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFV 118
+LSD LK + G + +NA + T++ S A L+GNEG G++ + +
Sbjct: 166 NLSDWIGRLKESKVPVYGTAL-ENAREYTKYESSDSFALLVGNEGNGVNKELLANTAANL 224
Query: 119 YIPQYGGGTASLNVTVAASIVLHHF 143
YIP + G + SLNV VAA I+L+H
Sbjct: 225 YIPIF-GKSESLNVAVAAGILLYHL 248
>gi|340757340|ref|ZP_08693942.1| 23S rRNA methyltransferase [Fusobacterium varium ATCC 27725]
gi|251834604|gb|EES63167.1| 23S rRNA methyltransferase [Fusobacterium varium ATCC 27725]
Length = 255
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 7/142 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILV-GRRD-FN---AFGSHGSTSHVNFRHFHSL 60
VV+ I N+GT+ R A A G +++L G D +N S GS ++N +
Sbjct: 109 VVLDKIGDPGNLGTIIRVADAAGFKDILLTKGSVDCYNEKVVRSSMGSIFNMNIIYMEE- 167
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK ++ I + N+V TQ + A + G+EG G+S ++CD + I
Sbjct: 168 EELIALLKKEEYKIVVTALEKNSVSYTQMKLAEKNAIVFGSEGDGVSQNFLKVCDEKIII 227
Query: 121 PQYGGGTASLNVTVAASIVLHH 142
P YG SLNV +A+ I+L+
Sbjct: 228 PIYGIA-ESLNVAMASGIILYK 248
>gi|117621457|ref|YP_854563.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562864|gb|ABK39812.1| tRNA guanosine-2'-O-methyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 253
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDF---NAFGSHGSTSHVNFRHFHSLSD 62
V + + K HN+ + R+A A G+ + V + + + GS + V+ + +
Sbjct: 32 VCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKGTARGSQNWVDVKLHPDIGS 91
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK+ I ++D++VD + K TA L+G E G+ + + D + IP
Sbjct: 92 AVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQEKHGIGEEALALADHHIVIPM 151
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VAA+ +L+
Sbjct: 152 V-GMVQSLNVSVAAAAILY 169
>gi|335041477|ref|ZP_08534514.1| tRNA/rRNA methyltransferase (SpoU) [Caldalkalibacillus thermarum
TA2.A1]
gi|334178635|gb|EGL81363.1| tRNA/rRNA methyltransferase (SpoU) [Caldalkalibacillus thermarum
TA2.A1]
Length = 256
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 8/167 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSH--VNFRHFHSLSD 62
V++ + HN + RSA AFGV + I+VGR F+ ++H + ++
Sbjct: 51 VLLEAVDDGHNQAAVLRSADAFGVQNVSIVVGRAPFSPNRKVTQSAHKWLTIERQPTIET 110
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A + + + + +AV + + + T FL GNE G++ + E+ D IP
Sbjct: 111 AIKTAQERGYQVLASHLGADAVPLAELDLSQPTVFLFGNEHDGVTEEALEMADGNFIIPM 170
Query: 123 YGGGTASLNVTVAASIVLHHFGVWAGFSERTRDGNKYVVAERSARQV 169
Y G SLN++VAA+I LH A R G+ Y + + +++
Sbjct: 171 Y-GFVQSLNISVAAAITLHQ----ATQRARALVGDAYFLTPQEQKEL 212
>gi|302876553|ref|YP_003845186.1| TrmH family RNA methyltransferase [Clostridium cellulovorans 743B]
gi|307687225|ref|ZP_07629671.1| RNA methyltransferase [Clostridium cellulovorans 743B]
gi|302579410|gb|ADL53422.1| RNA methyltransferase, TrmH family, group 3 [Clostridium
cellulovorans 743B]
Length = 309
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSL 60
+++ I HN+G + R+A GV +++ RR+ S G+ ++ ++
Sbjct: 163 IILDEIEDPHNLGAILRTAEVCGVHGVVIPKRRNVGITPTVYKTSAGAVQYMKVAKVPNI 222
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
+ LK K I G ++ D V F+ + A ++G+EG G+S E CD V I
Sbjct: 223 NSVIDSLKKKGIWIYGADM-DGKVYCQDANFRGAAALIIGSEGRGISKLTKEKCDLLVKI 281
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G T SLN +VA I+++
Sbjct: 282 PMVGQIT-SLNASVAGGILMYEI 303
>gi|145296765|ref|YP_001139586.1| hypothetical protein cgR_2669 [Corynebacterium glutamicum R]
gi|140846685|dbj|BAF55684.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 206
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF V+ + +VGRR +N G+ + + + H +
Sbjct: 58 HVAIENFENDANIGTVVRTANAFAVNTVHIVGRRRWNRRGAMVTDRYQHLMHHEDVDSLL 117
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ I ++ T +V + K+ L G EG G++ I Q+
Sbjct: 118 AWAIAEGLTIVAIDNTPGSVPLETAELPKNCLLLFGQEGPGVTEAARAGALMTCSIAQF- 176
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 177 GSTRSINAGVAAGIAMHAW 195
>gi|30260282|ref|NP_842659.1| RNA methyltransferase [Bacillus anthracis str. Ames]
gi|42779172|ref|NP_976419.1| RNA methyltransferase [Bacillus cereus ATCC 10987]
gi|47525346|ref|YP_016695.1| RNA methyltransferase [Bacillus anthracis str. 'Ames Ancestor']
gi|47569826|ref|ZP_00240496.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus G9241]
gi|49183125|ref|YP_026377.1| RNA methyltransferase [Bacillus anthracis str. Sterne]
gi|49476710|ref|YP_034444.1| tRNA/rRNA methyltransferase SpoU [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52145126|ref|YP_081703.1| TrmH family tRNA methyltransferase [Bacillus cereus E33L]
gi|65317552|ref|ZP_00390511.1| COG0566: rRNA methylases [Bacillus anthracis str. A2012]
gi|118475862|ref|YP_893013.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis str. Al Hakam]
gi|165873145|ref|ZP_02217761.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0488]
gi|167635112|ref|ZP_02393429.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0442]
gi|167641947|ref|ZP_02400182.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0193]
gi|170689565|ref|ZP_02880751.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0465]
gi|170707589|ref|ZP_02898042.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0389]
gi|177655588|ref|ZP_02936969.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0174]
gi|190568999|ref|ZP_03021900.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. Tsiankovskii-I]
gi|196036983|ref|ZP_03104350.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus W]
gi|217957667|ref|YP_002336211.1| TrmH family RNA methyltransferase [Bacillus cereus AH187]
gi|218901294|ref|YP_002449128.1| TrmH family RNA methyltransferase [Bacillus cereus AH820]
gi|222093862|ref|YP_002527912.1| tRNA/rRNA methyltransferase (spou); trmh family [Bacillus cereus
Q1]
gi|225862144|ref|YP_002747522.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
03BB102]
gi|227812765|ref|YP_002812774.1| TrmH family RNA methyltransferase [Bacillus anthracis str. CDC 684]
gi|229604658|ref|YP_002864743.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0248]
gi|254684405|ref|ZP_05148265.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. CNEVA-9066]
gi|254724232|ref|ZP_05186017.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A1055]
gi|254733754|ref|ZP_05191469.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. Western North America USA6153]
gi|254744606|ref|ZP_05202285.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. Kruger B]
gi|254756310|ref|ZP_05208339.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. Vollum]
gi|254758388|ref|ZP_05210415.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. Australia 94]
gi|301051829|ref|YP_003790040.1| tRNA/rRNA methyltransferase [Bacillus cereus biovar anthracis str.
CI]
gi|375282189|ref|YP_005102624.1| TrmH family RNA methyltransferase [Bacillus cereus NC7401]
gi|376264119|ref|YP_005116831.1| 23S rRNA (guanosine-2'-O-)-methyltransferase [Bacillus cereus
F837/76]
gi|384177997|ref|YP_005563759.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|386733958|ref|YP_006207139.1| tRNA/rRNA methyltransferase [Bacillus anthracis str. H9401]
gi|402554322|ref|YP_006595593.1| tRNA/rRNA methyltransferase [Bacillus cereus FRI-35]
gi|421510417|ref|ZP_15957310.1| tRNA/rRNA methyltransferase [Bacillus anthracis str. UR-1]
gi|421640505|ref|ZP_16081087.1| tRNA/rRNA methyltransferase [Bacillus anthracis str. BF1]
gi|423357617|ref|ZP_17335212.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus IS075]
gi|423376316|ref|ZP_17353630.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
AND1407]
gi|423553974|ref|ZP_17530301.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
ISP3191]
gi|423572083|ref|ZP_17548297.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
MSX-A12]
gi|423578056|ref|ZP_17554175.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
MSX-D12]
gi|423608083|ref|ZP_17583976.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus VD102]
gi|30253603|gb|AAP24145.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. Ames]
gi|42735087|gb|AAS39027.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus ATCC
10987]
gi|47500494|gb|AAT29170.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. 'Ames Ancestor']
gi|47553519|gb|EAL11900.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus G9241]
gi|49177052|gb|AAT52428.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. Sterne]
gi|49328266|gb|AAT58912.1| tRNA/rRNA methyltransferase (SpoU); probable TrmH family [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978595|gb|AAU20145.1| tRNA/rRNA SpoU-like methyltransferase; probable TrmH family
[Bacillus cereus E33L]
gi|118415087|gb|ABK83506.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis str. Al Hakam]
gi|164711125|gb|EDR16686.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0488]
gi|167510078|gb|EDR85489.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0193]
gi|167529586|gb|EDR92336.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0442]
gi|170127585|gb|EDS96459.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0389]
gi|170666478|gb|EDT17255.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0465]
gi|172080052|gb|EDT65150.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0174]
gi|190559923|gb|EDV13907.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. Tsiankovskii-I]
gi|195990406|gb|EDX54407.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus W]
gi|217065144|gb|ACJ79394.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus AH187]
gi|218539078|gb|ACK91476.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus AH820]
gi|221237910|gb|ACM10620.1| tRNA/rRNA methyltransferase (SpoU); probable TrmH family [Bacillus
cereus Q1]
gi|225787673|gb|ACO27890.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
03BB102]
gi|227007212|gb|ACP16955.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. CDC 684]
gi|229269066|gb|ACQ50703.1| RNA methyltransferase, TrmH family, group 3 [Bacillus anthracis
str. A0248]
gi|300373998|gb|ADK02902.1| tRNA/rRNA methyltransferase (SpoU); probable TrmH family [Bacillus
cereus biovar anthracis str. CI]
gi|324324081|gb|ADY19341.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|358350712|dbj|BAL15884.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
NC7401]
gi|364509919|gb|AEW53318.1| 23S rRNA (guanosine-2'-O-) -methyltransferase RlmB [Bacillus cereus
F837/76]
gi|384383810|gb|AFH81471.1| tRNA/rRNA methyltransferase [Bacillus anthracis str. H9401]
gi|401074483|gb|EJP82883.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus IS075]
gi|401088773|gb|EJP96955.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
AND1407]
gi|401182181|gb|EJQ89320.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
ISP3191]
gi|401198805|gb|EJR05718.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
MSX-A12]
gi|401203636|gb|EJR10472.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus
MSX-D12]
gi|401238766|gb|EJR45199.1| RNA methyltransferase, TrmH family, group 3 [Bacillus cereus VD102]
gi|401795532|gb|AFQ09391.1| tRNA/rRNA methyltransferase [Bacillus cereus FRI-35]
gi|401819499|gb|EJT18676.1| tRNA/rRNA methyltransferase [Bacillus anthracis str. UR-1]
gi|403392321|gb|EJY89575.1| tRNA/rRNA methyltransferase [Bacillus anthracis str. BF1]
Length = 247
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 7/144 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +I+ RR A S G+ ++ +
Sbjct: 97 FLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTN 156
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + I G + D K ++G+EG G+S E CDF +
Sbjct: 157 LSRTIDELKERGLWIAGTD-AKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLIT 215
Query: 120 IPQYGGGTASLNVTVAASIVLHHF 143
+P G T SLN +VAAS++++
Sbjct: 216 LPMVGKVT-SLNASVAASLLMYEV 238
>gi|19553964|ref|NP_601966.1| rRNA methylase [Corynebacterium glutamicum ATCC 13032]
gi|417969452|ref|ZP_12610391.1| SPOU rRNA methylase family protein [Corynebacterium glutamicum
S9114]
gi|418246196|ref|ZP_12872593.1| SPOU rRNA methylase family protein [Corynebacterium glutamicum ATCC
14067]
gi|21325544|dbj|BAC00166.1| rRNA methylases [Corynebacterium glutamicum ATCC 13032]
gi|344046169|gb|EGV41835.1| SPOU rRNA methylase family protein [Corynebacterium glutamicum
S9114]
gi|354509741|gb|EHE82673.1| SPOU rRNA methylase family protein [Corynebacterium glutamicum ATCC
14067]
gi|385144856|emb|CCH25895.1| rRNA methylase [Corynebacterium glutamicum K051]
Length = 206
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+GT+ R+A AF V+ + +VGRR +N G+ + + + H +
Sbjct: 58 HVAIENFENDANIGTVVRTANAFAVNTVHIVGRRRWNRRGAMVTDRYQHLMHHEDVDSLL 117
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ I ++ T +V + K+ L G EG G++ I Q+
Sbjct: 118 AWAIAERLTIVAIDNTPGSVPLETAELPKNCLLLFGQEGPGVTEAARAGALMTCSIAQF- 176
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 177 GSTRSINAGVAAGIAMHAW 195
>gi|428780080|ref|YP_007171866.1| rRNA methylase [Dactylococcopsis salina PCC 8305]
gi|428694359|gb|AFZ50509.1| rRNA methylase [Dactylococcopsis salina PCC 8305]
Length = 236
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGV-SEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSD 62
V++ ++ K HN + R+ A GV + + D AF + GS V+ L
Sbjct: 28 VLLEDVHKPHNFSAIIRTCDAVGVFAAHGVYNEGDVPAFSETAKGSEKWVDIHTHPDLET 87
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK+++ + +T+NA+D + K + L G E G+S + + D +YIP
Sbjct: 88 AVNHLKAQNFTLYATHLTENALDYRTIDYTKPSCILFGAEKWGVSTEAMALVDQAIYIPM 147
Query: 123 YGGGTASLNVTVAASIVL 140
G SLNV+VAA+++L
Sbjct: 148 L-GMVQSLNVSVAAAVIL 164
>gi|149276476|ref|ZP_01882620.1| putative SpoU rRNA methylase family protein [Pedobacter sp. BAL39]
gi|149232996|gb|EDM38371.1| putative SpoU rRNA methylase family protein [Pedobacter sp. BAL39]
Length = 219
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSH--------GSTSHVNFRHF 57
VV+ N+ HN+G++ R+ F ++++ L G A H G+T V+++H+
Sbjct: 70 VVLDNVRSMHNIGSIFRTGDGFAITQLCLCG---ITAQPPHREIEKTALGATQSVDWKHY 126
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDV-TQHPFK-KSTAFLLGNEGMGLSAKECEICD 115
S +A L+ + I VE + + T P + + A + GNE G+S + E+ D
Sbjct: 127 ESTLEAVKALREEGYLIIAVEQASGSTMLNTFKPQQDQKYALIFGNEVNGVSDEVMEVID 186
Query: 116 FFVYIPQYGGGTASLNVTVAASIVLHHF 143
+ IPQ+ G S N+ ++A IVL F
Sbjct: 187 ECIEIPQF-GTKHSFNIVISAGIVLWDF 213
>gi|452910549|ref|ZP_21959229.1| Putative RNA methyltransferase [Kocuria palustris PEL]
gi|452834413|gb|EME37214.1| Putative RNA methyltransferase [Kocuria palustris PEL]
Length = 216
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF E+ ++GRR +N G+ + + + RH S
Sbjct: 65 HVAIENWGHDFNIGSVVRTANAFLAREVHIIGRRRWNRRGAMVTDRYQHLRHHPSTEQFL 124
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + + V+ + + + L G EG G+S + E V I Q+
Sbjct: 125 AWARQEGLPVIAVDNVAGSEPLELFDLPQRCVLLFGQEGPGVSPEVLEAAAATVAIEQF- 183
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N AA++ +H +
Sbjct: 184 GSTRSINAGAAAAVTMHAW 202
>gi|88854933|ref|ZP_01129599.1| tRNA/rRNA methyltransferase [marine actinobacterium PHSC20C1]
gi|88816094|gb|EAR25950.1| tRNA/rRNA methyltransferase [marine actinobacterium PHSC20C1]
Length = 210
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ RSA AFG + ++GRR +N G+ + + + H ++
Sbjct: 65 HVAIENWQHDMNIGSIVRSANAFGADTVHIIGRRRWNKRGAMVTDRYQHVLHHPDVAAFL 124
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + D I ++ +V + K L G EG GLS + E V I Q+
Sbjct: 125 EWTAANDLPIIAIDNVPGSVIIETFDIPKRCVLLFGQEGPGLSPEAIEAATDVVEISQF- 183
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N + AA++ +H++
Sbjct: 184 GSTRSINASAAAAVAMHNW 202
>gi|338706087|ref|YP_004672855.1| putative rRNA (adenosine-2'-O-)-methyltransferase [Treponema
paraluiscuniculi Cuniculi A]
gi|335344148|gb|AEH40064.1| probable rRNA (adenosine-2'-O-)-methyltransferase [Treponema
paraluiscuniculi Cuniculi A]
Length = 292
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMIL-----VGRRDFNAFGSHGSTSHVNFRHFHSL 60
+V+ I HNVG + RSA F V ++L G + A S G+ + V +L
Sbjct: 134 LVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETIARVSAGAVAWVPLVRVRNL 193
Query: 61 SDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYI 120
LK + G ++ A+ P K TA +LGNEG G+S CD + I
Sbjct: 194 VRTAGILKRSGFWLYGADVAGEAIGARTFPPK--TALVLGNEGHGVSPLLRTHCDALISI 251
Query: 121 PQYGGGTASLNVTVAASIVLHHF 143
P G SLNV+VAA I+L+
Sbjct: 252 PTQ-GNVDSLNVSVAAGILLYEI 273
>gi|205372087|ref|ZP_03224904.1| 23S rRNA methyltransferase [Bacillus coahuilensis m4-4]
Length = 246
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Query: 15 HNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHSLSDARVFLKS 69
HN+G++ R+A A G +I+ RR A S G+ H+ +LS LK
Sbjct: 106 HNLGSIMRTADAVGAHGIIIPKRRAVGLTATVAKASTGAIEHIPVARVTNLSQTIDELKE 165
Query: 70 KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTAS 129
+ + G + D Q ++G+EG G+S E CDF V +P G T S
Sbjct: 166 RGIWVTGTD-AKGKQDYRQMDASMPLCLVIGSEGKGMSRLVKEKCDFLVQLPMRGHVT-S 223
Query: 130 LNVTVAASIVLHHF 143
LN +VAAS++L+
Sbjct: 224 LNASVAASLLLYEV 237
>gi|423198894|ref|ZP_17185477.1| hypothetical protein HMPREF1171_03509 [Aeromonas hydrophila SSU]
gi|404629742|gb|EKB26470.1| hypothetical protein HMPREF1171_03509 [Aeromonas hydrophila SSU]
Length = 231
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDF---NAFGSHGSTSHVNFRHFHSLSD 62
V + + K HN+ + R+A A G+ + V + + + GS + V+ + +
Sbjct: 11 VCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKSWIHKRKGTARGSQNWVDVKLHPDIGS 70
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK+ I ++D++VD + K TA L+G E G+ + + D + IP
Sbjct: 71 AVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQEKHGIGEEALALADHHIVIPM 130
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VAA+ +L+
Sbjct: 131 V-GMVQSLNVSVAAAAILY 148
>gi|406675021|ref|ZP_11082212.1| hypothetical protein HMPREF1170_00420 [Aeromonas veronii AMC35]
gi|404628159|gb|EKB24945.1| hypothetical protein HMPREF1170_00420 [Aeromonas veronii AMC35]
Length = 243
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDF---NAFGSHGSTSHVNFRHFHSLSD 62
V + + K HN+ + R+A A G+ + V + + + GS + V+ + +
Sbjct: 22 VCMEEVHKPHNLAAIVRTADAIGIHRVHAVWPKTWIHKRKGTARGSQNWVDVKLHPDIGT 81
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQ 122
A LK+ I ++D++VD + K TA L+G E G+ + + D + IP
Sbjct: 82 AVAELKASGMQILATHLSDSSVDFRAIDYTKPTAILVGQEKHGIGEEALALADHHIVIPM 141
Query: 123 YGGGTASLNVTVAASIVLH 141
G SLNV+VAA+ +L+
Sbjct: 142 V-GMVQSLNVSVAAAAILY 159
>gi|169350897|ref|ZP_02867835.1| hypothetical protein CLOSPI_01671 [Clostridium spiroforme DSM 1552]
gi|169292483|gb|EDS74616.1| RNA methyltransferase, TrmH family, group 3 [Clostridium spiroforme
DSM 1552]
Length = 244
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 7/133 (5%)
Query: 15 HNVGTLARSATAFGVSEMILVGRRDFNAFG-----SHGSTSHVNFRHFHSLSDARVFLKS 69
HN+G + R+ A GV +I+ R G S G+ HV +L+ LK
Sbjct: 106 HNLGAILRTCDAIGVDGVIIGKNRSVGLNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKK 165
Query: 70 KDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYGGGTAS 129
+ G ++ DNA D Q + ++G+EG G+S + CDF V +P G T S
Sbjct: 166 HSFWVVGCDL-DNAQDYRQIDYNMPLVIVIGSEGFGISRLVKKTCDFNVVLPMMGHVT-S 223
Query: 130 LNVTVAASIVLHH 142
LN +VA +++L+
Sbjct: 224 LNASVATAVILYQ 236
>gi|228937394|ref|ZP_04100040.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970280|ref|ZP_04130939.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976850|ref|ZP_04137262.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis Bt407]
gi|228782820|gb|EEM30986.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis Bt407]
gi|228789389|gb|EEM37309.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822227|gb|EEM68209.1| tRNA/rRNA methyltransferase [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 161
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +I+ RR A S G+ ++ +
Sbjct: 11 FLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTN 70
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + I G + D K ++G+EG G+S E CDF +
Sbjct: 71 LSRTIDELKERGLWIAGTD-AKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLIT 129
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAAS++++
Sbjct: 130 LPMVGKVT-SLNASVAASLLMYE 151
>gi|229027939|ref|ZP_04184092.1| tRNA/rRNA methyltransferase [Bacillus cereus AH1271]
gi|229170943|ref|ZP_04298544.1| tRNA/rRNA methyltransferase [Bacillus cereus MM3]
gi|228612483|gb|EEK69704.1| tRNA/rRNA methyltransferase [Bacillus cereus MM3]
gi|228733327|gb|EEL84156.1| tRNA/rRNA methyltransferase [Bacillus cereus AH1271]
Length = 175
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ I HN+G++ R+A A G +I+ RR A S G+ ++ +
Sbjct: 25 FLILDEIEDPHNLGSIMRTADATGAHGIIIPKRRAVGLTASVAKASTGAIEYIPVARVTN 84
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
LS LK + I G + D K ++G+EG G+S E CDF +
Sbjct: 85 LSRTIDELKERGLWIAGTD-AKGKTDYRNLDGKMPIGLVIGSEGKGMSRIIGEKCDFLIT 143
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAAS++++
Sbjct: 144 LPMVGKVT-SLNASVAASLLMYE 165
>gi|381183089|ref|ZP_09891853.1| RNA methyltransferase, TrmH family [Listeriaceae bacterium TTU
M1-001]
gi|380317012|gb|EIA20367.1| RNA methyltransferase, TrmH family [Listeriaceae bacterium TTU
M1-001]
Length = 250
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 7/143 (4%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRHFHS 59
++++ + HN+G++ R+A + G +I+ RR + A S G+ +V +
Sbjct: 100 FIILDELEDPHNLGSIMRTADSIGAHGIIIPKRRSVSLTQTVAKASTGAIEYVPVVRVTN 159
Query: 60 LSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVY 119
++ L+ + I G + + ++ D A ++G+EG G+S E CDF ++
Sbjct: 160 IAKTMEELQKRGLWIFGTDASGSS-DYRTMDADLPLALVIGSEGRGMSRLVREKCDFLIH 218
Query: 120 IPQYGGGTASLNVTVAASIVLHH 142
+P G T SLN +VAASI+L+
Sbjct: 219 LPMIGKVT-SLNASVAASILLYE 240
>gi|222152119|ref|YP_002561279.1| hypothetical protein MCCL_1876 [Macrococcus caseolyticus JCSC5402]
gi|222121248|dbj|BAH18583.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 263
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 2 IESYVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN-----AFGSHGSTSHVNFRH 56
+ + +++ + HN+G++ R+A A G+ +++ RR + S G+ HV
Sbjct: 111 LSTIMILDGLEDPHNLGSIIRTADAIGIDGIMIPKRRSVSLNQTVVKASTGAVEHVPVMR 170
Query: 57 FHSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
++++ A LK + G + +VD + A ++G+EG G+S E CDF
Sbjct: 171 VNNINQAIDKLKDAGYWVAGTD-AKQSVDYRKMTADIDLAIVIGSEGEGMSRLVKEKCDF 229
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
+++P G SLN +VAAS++++
Sbjct: 230 LIHLPMV-GHVNSLNASVAASLLMYEV 255
>gi|254432253|ref|ZP_05045956.1| RNA methyltransferase, TrmH family, group 3 [Cyanobium sp. PCC
7001]
gi|197626706|gb|EDY39265.1| RNA methyltransferase, TrmH family, group 3 [Cyanobium sp. PCC
7001]
Length = 229
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Query: 1 MIESYVVVHNIAKRHNVGTLARSATAFGVSE---MILVGRRDFNAFGSHGSTSHVNFRHF 57
M + V++ ++ K HN+ + RS A GV E + L GR + GS V
Sbjct: 19 MADLTVLLEHVEKPHNLSAILRSCDAVGVLEAHAVCLKGRLPTFNSTAQGSQKWVPLHRH 78
Query: 58 HSLSDARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFF 117
S + A L+ + + G ++ AVD F TAF+LG E GLS + + D
Sbjct: 79 PSAAAALQSLREQGFRLYGTHLSAEAVDYRSCDFTGPTAFVLGAEKWGLSPECAGLVDQA 138
Query: 118 VYIPQYGGGTASLNVTVAASIVL 140
+ IP G SLNV+VA + +L
Sbjct: 139 IVIPM-SGMVQSLNVSVATATLL 160
>gi|453067412|ref|ZP_21970700.1| methyltransferase [Rhodococcus qingshengii BKS 20-40]
gi|452767182|gb|EME25424.1| methyltransferase [Rhodococcus qingshengii BKS 20-40]
Length = 230
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N A N+GT+ R+A AF + + +VGRR +N G+ + + + H + +
Sbjct: 82 HVAIENFAHDANIGTVVRTANAFAAAAVHIVGRRRWNRRGAMVTDRYQHIVHHADIGELV 141
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + I V+ T +V + + L G EG G++ E+ V I Q+
Sbjct: 142 EYARENSLTIVAVDNTPGSVPLETASLPRECILLFGQEGPGVTDHAKEVASMTVSIAQF- 200
Query: 125 GGTASLNVTVAASIVLHHF 143
G T S+N VAA I +H +
Sbjct: 201 GSTRSINAGVAAGIAMHAW 219
>gi|333895080|ref|YP_004468955.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas sp. SN2]
gi|332995098|gb|AEF05153.1| tRNA guanosine-2'-O-methyltransferase [Alteromonas sp. SN2]
Length = 243
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFG--SHGSTSHVNFRHFHSLSDA 63
V + N+ K HNV + R+ A G+ + V + G + GS V + SL +A
Sbjct: 22 VCLENVHKPHNVSAVVRTCDAIGIHRVHTVWEEKYQFRGDTAMGSQQWVRQTNHDSLGNA 81
Query: 64 RVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQY 123
LK + + ++D AV + + K TA + G E G + + + D + IP
Sbjct: 82 IGALKQQGMQVLVTHLSDTAVGFREVDYTKPTAIIFGQERYGATDEAIAMADQDIIIP-M 140
Query: 124 GGGTASLNVTVAASIVLH 141
G SLNV+VAA++VL+
Sbjct: 141 AGMVQSLNVSVAAALVLY 158
>gi|298709142|emb|CBJ31087.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 118
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFN--AFGSHGSTSHVNFRHFHSLSD 62
++V+ NI+KR N+ +L SA AF +E+++VG+ F+ G + F F L
Sbjct: 16 FLVIANISKRCNIRSLIASAVAFQ-AEILIVGQPKFSIETHAPRGLPPGITFTRFSDLPS 74
Query: 63 ARVFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNE 102
R ++ S+ + GVEI A ++ + PF + AF+ GNE
Sbjct: 75 CRDYVHSRGGTLIGVEIGGGARNIDEEPFLGTCAFMPGNE 114
>gi|291446085|ref|ZP_06585475.1| tRNA/rRNA methyltransferase [Streptomyces roseosporus NRRL 15998]
gi|291349032|gb|EFE75936.1| tRNA/rRNA methyltransferase [Streptomyces roseosporus NRRL 15998]
Length = 222
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V V N N+G++ R+A AF E+ +VGRR +N G+ + + + RH +D
Sbjct: 71 HVAVENWTHDFNIGSVVRTANAFLAKEIHIVGRRRWNRRGAMVTDRYQHVRHHSDTADLT 130
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ ++ I G++ AV + + + L G EG GL+ + E I Q+
Sbjct: 131 AWATAEGLPIIGIDNLPGAVPLERTELPRRCVLLFGQEGPGLTEEAREHATAVCSIAQF- 189
Query: 125 GGTASLN 131
G T S+N
Sbjct: 190 GSTRSIN 196
>gi|269796792|ref|YP_003316247.1| rRNA methylase [Sanguibacter keddieii DSM 10542]
gi|269098977|gb|ACZ23413.1| rRNA methylase [Sanguibacter keddieii DSM 10542]
Length = 237
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 5 YVVVHNIAKRHNVGTLARSATAFGVSEMILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V + N N+G++ R+A AF +E+ +VGRR +N G+ + + + RH +
Sbjct: 92 HVAIENWGHDLNIGSVVRTANAFAAAEIHIVGRRRWNRRGAMVTDRYQHVRHHPDVEAFL 151
Query: 65 VFLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDFFVYIPQYG 124
+ + + G++ +V + ++ F + L G EG GL+ + V+I Q+
Sbjct: 152 AWAQDAGLPVVGIDNVPGSVAIERYAFPERCVMLFGQEGAGLTPEARSASVDLVHITQF- 210
Query: 125 GGTASLN 131
G T S+N
Sbjct: 211 GSTRSIN 217
>gi|149195840|ref|ZP_01872897.1| spoU protein [Lentisphaera araneosa HTCC2155]
gi|149141302|gb|EDM29698.1| spoU protein [Lentisphaera araneosa HTCC2155]
Length = 233
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 6 VVVHNIAKRHNVGTLARSATAFGVSEM-ILVGRRDFNAFGSHGSTSHVNFRHFHSLSDAR 64
+V+ N+ + HN + R+A AFG+ + ++ DF A ++H + + ++++
Sbjct: 45 LVLENLYQEHNASAILRNADAFGIQNINVIENDNDFAANKEVSMSAH-KWLDIKAWNESK 103
Query: 65 V--------FLKSKDCDICGVEITDNAVDVTQHPFKKSTAFLLGNEGMGLSAKECEICDF 116
+ LK + IC + ++ + + P + A G E GLS E+ D+
Sbjct: 104 IDNTVKCLSALKKQGYKICATSLRPESITLDELPVDEPIALCFGTELTGLSEVAHEMADY 163
Query: 117 FVYIPQYGGGTASLNVTVAASIVLHHF 143
YIP G S NV+VA+++ L H
Sbjct: 164 MTYIP-MNGFIQSFNVSVASALSLSHL 189
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,209,969,895
Number of Sequences: 23463169
Number of extensions: 122179040
Number of successful extensions: 302168
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 6282
Number of HSP's that attempted gapping in prelim test: 295461
Number of HSP's gapped (non-prelim): 7648
length of query: 217
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 80
effective length of database: 9,144,741,214
effective search space: 731579297120
effective search space used: 731579297120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 74 (33.1 bits)