Query 040495
Match_columns 443
No_of_seqs 356 out of 4373
Neff 10.1
Searched_HMMs 13730
Date Mon Mar 25 14:25:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040495.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040495hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 9.4E-42 6.8E-46 317.9 20.2 292 29-325 2-302 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 1.1E-30 7.7E-35 242.6 17.4 255 123-435 51-311 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 100.0 3.7E-27 2.7E-31 224.7 32.9 321 74-427 44-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 100.0 1.2E-26 8.8E-31 221.1 32.4 327 81-443 29-375 (384)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.9 7.5E-26 5.4E-30 208.8 26.4 273 61-356 9-284 (305)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 9.8E-25 7.2E-29 201.2 27.5 242 99-357 11-255 (305)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 1.8E-24 1.3E-28 197.3 21.5 222 103-357 16-238 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 2.1E-24 1.5E-28 196.8 18.6 225 79-330 16-241 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 2.4E-22 1.7E-26 181.1 20.7 196 219-429 12-207 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.9 5.4E-22 3.9E-26 178.8 20.4 133 193-327 76-208 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 1E-18 7.4E-23 163.4 31.6 309 75-441 39-347 (353)
12 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 9.8E-23 7.1E-27 198.1 3.9 362 74-437 2-446 (460)
13 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 5.9E-18 4.3E-22 158.2 32.2 295 74-425 58-352 (353)
14 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 1.4E-18 1.1E-22 152.2 15.2 188 101-328 22-209 (227)
15 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 6.4E-20 4.6E-24 177.9 4.5 333 98-432 2-412 (460)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 1.9E-17 1.4E-21 144.9 18.5 186 217-426 41-226 (227)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 6.8E-18 4.9E-22 149.4 13.5 102 79-183 13-116 (242)
18 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 1.7E-17 1.2E-21 141.1 12.9 129 220-357 11-139 (192)
19 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 3.5E-17 2.5E-21 144.7 14.5 103 125-230 11-116 (242)
20 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.4E-16 1E-20 136.2 16.7 160 240-421 39-198 (199)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 2.3E-16 1.7E-20 136.0 18.0 164 241-426 46-209 (210)
22 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 2.3E-17 1.7E-21 140.3 9.8 172 243-430 10-183 (192)
23 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 3.1E-16 2.2E-20 135.2 16.7 164 217-402 46-209 (210)
24 d2omxa2 c.10.2.1 (A:37-235) In 99.7 5.5E-16 4E-20 132.5 17.6 147 265-430 39-185 (199)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.7 8.5E-17 6.2E-21 145.5 11.1 256 173-439 3-268 (284)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.7 7.9E-17 5.7E-21 145.8 8.8 254 149-415 3-268 (284)
27 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.6 4.2E-16 3.1E-20 145.2 6.3 45 138-182 23-71 (344)
28 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.6 1.1E-15 8.2E-20 142.2 8.8 255 162-430 23-315 (344)
29 d1a9na_ c.10.2.4 (A:) Spliceso 99.6 9.5E-15 6.9E-19 119.8 11.1 125 287-423 15-145 (162)
30 d1dcea3 c.10.2.2 (A:444-567) R 99.5 3.8E-14 2.7E-18 110.6 11.5 100 102-206 2-102 (124)
31 d1a9na_ c.10.2.4 (A:) Spliceso 99.5 1.3E-13 9.2E-18 113.0 12.1 112 237-357 14-125 (162)
32 d1dcea3 c.10.2.2 (A:444-567) R 99.5 3E-13 2.2E-17 105.3 13.5 86 264-357 18-103 (124)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 1.1E-13 8.1E-18 117.4 1.3 146 265-423 22-180 (198)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.3 5.2E-14 3.8E-18 119.5 -2.4 87 92-183 42-128 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 2.1E-11 1.5E-15 98.8 11.1 102 271-381 13-115 (156)
36 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 2.3E-11 1.6E-15 98.6 10.0 93 90-183 23-116 (156)
37 d1koha1 c.10.2.3 (A:201-362) m 98.3 5.1E-08 3.7E-12 78.9 1.8 81 342-423 63-152 (162)
38 d1pgva_ c.10.1.1 (A:) Tropomod 98.3 5.4E-07 3.9E-11 73.0 6.2 91 338-428 38-142 (167)
39 d1pgva_ c.10.1.1 (A:) Tropomod 98.2 1.7E-06 1.2E-10 70.0 6.9 90 264-355 13-111 (167)
40 d1koha1 c.10.2.3 (A:201-362) m 98.1 8.5E-07 6.2E-11 71.4 4.8 106 291-405 43-156 (162)
41 d1io0a_ c.10.1.1 (A:) Tropomod 97.9 3.4E-06 2.5E-10 68.1 4.6 92 338-429 40-144 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 97.7 1.5E-05 1.1E-09 64.1 5.2 94 311-406 43-145 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=9.4e-42 Score=317.88 Aligned_cols=292 Identities=30% Similarity=0.483 Sum_probs=218.6
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCC--CccceeeCCCC--CcEEEEEcCCCCCcc--cccccccCCCCCCE
Q 040495 29 NSNETDRLALLAIKLQLHDPLGVTSSWNNSMSLC--QWTGVTCGRRH--QRVTRLDLRNQSIGG--PLSPYVGNLSFLRY 102 (443)
Q Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c--~w~gv~c~~~~--~~v~~L~l~~~~~~~--~~~~~~~~l~~L~~ 102 (443)
-|.++|++||++||+++.+|. .+++|..+.||| .|.||+|+... .||+.|+|+++.+.| .+|+.++++++|++
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~-~l~sW~~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~ 80 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHHCCCCC-cCCCCCCCCCCCCCcCCCeEEeCCCCcEEEEEEECCCCCCCCCCCCChHHhcCccccc
Confidence 489999999999999999875 688999888999 49999998653 489999999999987 47889999999999
Q ss_pred EeCCC-CcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeeccCCcccccCCccccCCcCccEeeeeccc
Q 040495 103 INLAN-NGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVGEIPSAIGSLFKLERLFIFHNH 181 (443)
Q Consensus 103 L~L~~-n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 181 (443)
|+|++ |.++|.+|..++++++|++|++++|.+.+..+..+..+.+|++++++.|.+.+.+|..++++++++.+++++|.
T Consensus 81 L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~ 160 (313)
T d1ogqa_ 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCcccceeeccccc
Confidence 99987 78999999999999999999999999998889889999999999999999998999999999999999999999
Q ss_pred cCccCCccccCCCCC-CEEEccCCcCCccc-ccccCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCCh
Q 040495 182 ITGQLPASIGNLSSL-LAFDVRENILWGRI-DSLVQLRNLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPV 259 (443)
Q Consensus 182 l~~~~~~~l~~l~~L-~~L~l~~n~l~~~~-~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 259 (443)
+.+.+|..+..+..+ +.+++++|.+++.. ..+..+ ....++++.+...+.+|..+..+++++.++++++.+++.+|
T Consensus 161 l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l-~~~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~- 238 (313)
T d1ogqa_ 161 ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG- 238 (313)
T ss_dssp CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC-CCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-
T ss_pred ccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccc-
Confidence 998899888877665 66777776666554 333333 23356666666655555555555666666666665554433
Q ss_pred hhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCC
Q 040495 260 DAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINN 325 (443)
Q Consensus 260 ~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 325 (443)
.+. .+++++.|++++|+++|.+|..++++++|++|++++|+++|.+|. ++++++|+.+++++|+
T Consensus 239 ~~~-~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~ 302 (313)
T d1ogqa_ 239 KVG-LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNK 302 (313)
T ss_dssp GCC-CCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSS
T ss_pred ccc-cccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCc
Confidence 222 445555555555555555555555555555555555555555543 3444444444444443
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.97 E-value=1.1e-30 Score=242.63 Aligned_cols=255 Identities=30% Similarity=0.513 Sum_probs=158.3
Q ss_pred ccCeEEccCCCCCC--CCChhhhcCCCCceeeccC-CcccccCCccccCCcCccEeeeeccccCccCCccccCCCCCCEE
Q 040495 123 MLEGLVLSNNSFSG--TIPTNLSRRSNLIELSVDT-NYLVGEIPSAIGSLFKLERLFIFHNHITGQLPASIGNLSSLLAF 199 (443)
Q Consensus 123 ~L~~L~l~~n~~~~--~~p~~l~~l~~L~~L~l~~-n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 199 (443)
+++.|+++++.+++ .+|..++++++|++|++++ |+++|.+|..++++++|++|++++|.+.+..+..+..
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~------- 123 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQ------- 123 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGG-------
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccc-------
Confidence 56777777777765 3566777777777777765 5666666666666666666666666666554444443
Q ss_pred EccCCcCCcccccccCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCC-CcEEeCCCCcC
Q 040495 200 DVRENILWGRIDSLVQLRNLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPN-LRQLSPNGNNF 278 (443)
Q Consensus 200 ~l~~n~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~-L~~L~L~~n~l 278 (443)
+.+|+.+++++|.+.+.+|..+.++++++++++++|.+++.+|..+. .+.. ++.+++++|++
T Consensus 124 ----------------~~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~-~l~~l~~~l~~~~n~l 186 (313)
T d1ogqa_ 124 ----------------IKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG-SFSKLFTSMTISRNRL 186 (313)
T ss_dssp ----------------CTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGG-CCCTTCCEEECCSSEE
T ss_pred ----------------hhhhcccccccccccccCchhhccCcccceeeccccccccccccccc-cccccccccccccccc
Confidence 44555566666666666677777777777777777777767776655 3433 36666666666
Q ss_pred CccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcc
Q 040495 279 TGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQG 358 (443)
Q Consensus 279 ~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 358 (443)
++..|..+..+.. ..+++.++...+.+|..+..++ +++.+++++|.+.+
T Consensus 187 ~~~~~~~~~~l~~-~~l~l~~~~~~~~~~~~~~~~~------------------------------~l~~l~~~~~~l~~ 235 (313)
T d1ogqa_ 187 TGKIPPTFANLNL-AFVDLSRNMLEGDASVLFGSDK------------------------------NTQKIHLAKNSLAF 235 (313)
T ss_dssp EEECCGGGGGCCC-SEEECCSSEEEECCGGGCCTTS------------------------------CCSEEECCSSEECC
T ss_pred ccccccccccccc-cccccccccccccccccccccc------------------------------cccccccccccccc
Confidence 6666655555433 3466666666555555444444 44445555555444
Q ss_pred cCChhHhhhccCCCEEeccCCcCeecCchhhhcCCCCCeEeCcCCcCcccCchhhcCCCCCCEEEccCCc-Cccc-CCc
Q 040495 359 VLPQSMANFSSTIKQIAMGRNRISGTIPPGIRSHANLNWLTMDSNLFTGTIPPVIGELKNLQLLDLGGNF-LQGS-IPS 435 (443)
Q Consensus 359 ~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~-l~~~-~p~ 435 (443)
.+| .+.. .++++.|++++|+++|.+|.+++.+++|++|+|++|+++|.+|+ ++++++|+.+++++|+ ++|. +|.
T Consensus 236 ~~~-~~~~-~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~~~L~~L~~l~l~~N~~l~g~plp~ 311 (313)
T d1ogqa_ 236 DLG-KVGL-SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSPLPA 311 (313)
T ss_dssp BGG-GCCC-CTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-STTGGGSCGGGTCSSSEEESTTSSC
T ss_pred ccc-cccc-ccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-cccCCCCCHHHhCCCccccCCCCCC
Confidence 333 2222 25666777777777767777777777777777777777777764 4566677777777775 4543 553
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.96 E-value=3.7e-27 Score=224.71 Aligned_cols=321 Identities=24% Similarity=0.369 Sum_probs=229.2
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeec
Q 040495 74 QRVTRLDLRNQSIGGPLSPYVGNLSFLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSV 153 (443)
Q Consensus 74 ~~v~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l 153 (443)
..+++|++++++++.. +.+..+++|++|++++|.+++ ++ .++++++|++|++++|.+++. + .++.+++|+.|++
T Consensus 44 ~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~i-~-~l~~l~~L~~L~~ 117 (384)
T d2omza2 44 DQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIADI-T-PLANLTNLTGLTL 117 (384)
T ss_dssp TTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCC-Cc-cccCCcccccccccccccccc-c-ccccccccccccc
Confidence 4689999999988753 357889999999999999985 44 389999999999999999854 3 3889999999999
Q ss_pred cCCcccccCCccccCCcCccEeeeeccccCccCCc-------------------cccCCCCCCEEEccCCcCCccccccc
Q 040495 154 DTNYLVGEIPSAIGSLFKLERLFIFHNHITGQLPA-------------------SIGNLSSLLAFDVRENILWGRIDSLV 214 (443)
Q Consensus 154 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~-------------------~l~~l~~L~~L~l~~n~l~~~~~~l~ 214 (443)
+++.+++..+ ......+.......+.+....+. .+...+.........+... ......
T Consensus 118 ~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 194 (384)
T d2omza2 118 FNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS-DISVLA 194 (384)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCC-CCGGGG
T ss_pred cccccccccc--ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccc-cccccc
Confidence 9998874432 33445666666666655422111 1122222222222222211 124456
Q ss_pred CCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCE
Q 040495 215 QLRNLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEM 294 (443)
Q Consensus 215 ~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~ 294 (443)
.+++++.+++++|.+++..| ....++|++|++++|.++ .++ .+. .+++|+.+++++|.+++..+ +..+++|++
T Consensus 195 ~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~-~~~-~l~-~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~ 267 (384)
T d2omza2 195 KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK-DIG-TLA-SLTNLTDLDLANNQISNLAP--LSGLTKLTE 267 (384)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC-CCG-GGG-GCTTCSEEECCSSCCCCCGG--GTTCTTCSE
T ss_pred cccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCC-Ccc-hhh-cccccchhccccCccCCCCc--ccccccCCE
Confidence 67788888888888775433 455678888888888887 444 233 67888888888888875433 677888888
Q ss_pred EecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEE
Q 040495 295 IEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQI 374 (443)
Q Consensus 295 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L 374 (443)
|+++++++++..+ +..++.++.++++.|.+.+.. .+..++++++|++++|++++. +. +.. +++|+.|
T Consensus 268 L~l~~~~l~~~~~--~~~~~~l~~l~~~~n~l~~~~--------~~~~~~~l~~L~ls~n~l~~l-~~-l~~-l~~L~~L 334 (384)
T d2omza2 268 LKLGANQISNISP--LAGLTALTNLELNENQLEDIS--------PISNLKNLTYLTLYFNNISDI-SP-VSS-LTKLQRL 334 (384)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCG--------GGGGCTTCSEEECCSSCCSCC-GG-GGG-CTTCCEE
T ss_pred eeccCcccCCCCc--ccccccccccccccccccccc--------ccchhcccCeEECCCCCCCCC-cc-ccc-CCCCCEE
Confidence 8888888875433 667888888888888877642 367778888888888888853 32 444 4788888
Q ss_pred eccCCcCeecCchhhhcCCCCCeEeCcCCcCcccCchhhcCCCCCCEEEccCC
Q 040495 375 AMGRNRISGTIPPGIRSHANLNWLTMDSNLFTGTIPPVIGELKNLQLLDLGGN 427 (443)
Q Consensus 375 ~L~~n~l~~~~p~~l~~~~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n 427 (443)
++++|++++ ++ .+..+++|++|++++|++++..| +.++++|+.|+|++|
T Consensus 335 ~L~~n~l~~-l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 335 FFANNKVSD-VS-SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp ECCSSCCCC-CG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred ECCCCCCCC-Ch-hHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 888888874 44 57888888888888888885443 778888888888887
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.96 E-value=1.2e-26 Score=221.11 Aligned_cols=327 Identities=25% Similarity=0.388 Sum_probs=247.9
Q ss_pred cCCCCCcccccccccCCCCCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeeccCCcccc
Q 040495 81 LRNQSIGGPLSPYVGNLSFLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVG 160 (443)
Q Consensus 81 l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~ 160 (443)
+....+++.+. ...+.+|++|++++++++. + +.+..+++|++|++++|.+++ +|. ++++++|++|++++|++.+
T Consensus 29 l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~-l~~-l~~L~~L~~L~L~~n~i~~ 102 (384)
T d2omza2 29 LGKTNVTDTVS--QTDLDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIAD 102 (384)
T ss_dssp TTCSSTTSEEC--HHHHTTCCEEECCSSCCCC-C-TTGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC
T ss_pred hCCCCCCCccC--HHHhCCCCEEECCCCCCCC-c-cccccCCCCCEEeCcCCcCCC-Ccc-ccCCccccccccccccccc
Confidence 33444444333 3467889999999999874 4 458899999999999999985 443 8999999999999999984
Q ss_pred cCCccccCCcCccEeeeeccccCccCCccccCCCCCCEEEccCCcCCccc--------------------ccccCCCCCC
Q 040495 161 EIPSAIGSLFKLERLFIFHNHITGQLPASIGNLSSLLAFDVRENILWGRI--------------------DSLVQLRNLR 220 (443)
Q Consensus 161 ~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~--------------------~~l~~l~~L~ 220 (443)
. + .++.+++|+.++++++.+++..+ ......+.......+.+.... ..+.......
T Consensus 103 i-~-~l~~l~~L~~L~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (384)
T d2omza2 103 I-T-PLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLE 178 (384)
T ss_dssp C-G-GGTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCC
T ss_pred c-c-ccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence 3 3 37899999999999998875432 334456666665554332211 1222233333
Q ss_pred EEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccC
Q 040495 221 LLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRN 300 (443)
Q Consensus 221 ~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n 300 (443)
......+.. ........+++++.+++++|.+++..|. . ..++|++|++++|.+++ + ..+..+++|+.+++++|
T Consensus 179 ~~~~~~~~~--~~~~~~~~l~~~~~l~l~~n~i~~~~~~--~-~~~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n 251 (384)
T d2omza2 179 RLDISSNKV--SDISVLAKLTNLESLIATNNQISDITPL--G-ILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANN 251 (384)
T ss_dssp EEECCSSCC--CCCGGGGGCTTCSEEECCSSCCCCCGGG--G-GCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSS
T ss_pred ccccccccc--ccccccccccccceeeccCCccCCCCcc--c-ccCCCCEEECCCCCCCC-c-chhhcccccchhccccC
Confidence 344443333 2345567789999999999999854442 2 57899999999999984 3 36788999999999999
Q ss_pred cCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEeccCCc
Q 040495 301 QFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGRNR 380 (443)
Q Consensus 301 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~ 380 (443)
.+++..+ +..+++|+.++++++.+++..+ +..+..++.+++++|.+++ ++ .+.. .++++.+++++|+
T Consensus 252 ~l~~~~~--~~~~~~L~~L~l~~~~l~~~~~--------~~~~~~l~~l~~~~n~l~~-~~-~~~~-~~~l~~L~ls~n~ 318 (384)
T d2omza2 252 QISNLAP--LSGLTKLTELKLGANQISNISP--------LAGLTALTNLELNENQLED-IS-PISN-LKNLTYLTLYFNN 318 (384)
T ss_dssp CCCCCGG--GTTCTTCSEEECCSSCCCCCGG--------GTTCTTCSEEECCSSCCSC-CG-GGGG-CTTCSEEECCSSC
T ss_pred ccCCCCc--ccccccCCEeeccCcccCCCCc--------ccccccccccccccccccc-cc-ccch-hcccCeEECCCCC
Confidence 9987544 7889999999999999987644 7788999999999999985 33 3444 4899999999999
Q ss_pred CeecCchhhhcCCCCCeEeCcCCcCcccCchhhcCCCCCCEEEccCCcCcccCCccccCCCCC
Q 040495 381 ISGTIPPGIRSHANLNWLTMDSNLFTGTIPPVIGELKNLQLLDLGGNFLQGSIPSSLGNLTLL 443 (443)
Q Consensus 381 l~~~~p~~l~~~~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L 443 (443)
+++. + .+..+++|++|++++|+++ .++ .+.++++|++|++++|++++..| +.+++.|
T Consensus 319 l~~l-~-~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L 375 (384)
T d2omza2 319 ISDI-S-PVSSLTKLQRLFFANNKVS-DVS-SLANLTNINWLSAGHNQISDLTP--LANLTRI 375 (384)
T ss_dssp CSCC-G-GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEECCSSCCCBCGG--GTTCTTC
T ss_pred CCCC-c-ccccCCCCCEEECCCCCCC-CCh-hHcCCCCCCEEECCCCcCCCChh--hccCCCC
Confidence 9964 3 3889999999999999998 455 58999999999999999996554 6666544
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.95 E-value=7.5e-26 Score=208.82 Aligned_cols=273 Identities=20% Similarity=0.234 Sum_probs=171.5
Q ss_pred CCCccceeeCCCCCcEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCCh
Q 040495 61 LCQWTGVTCGRRHQRVTRLDLRNQSIGGPLSPYVGNLSFLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPT 140 (443)
Q Consensus 61 ~c~w~gv~c~~~~~~v~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~ 140 (443)
.|.|..+.|.. .+++ .+|..+ .+++++|++++|.++...+..|.++++|++|++++|.+....|.
T Consensus 9 ~c~~~~~~C~~------------~~L~-~lP~~l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~ 73 (305)
T d1xkua_ 9 QCHLRVVQCSD------------LGLE-KVPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPG 73 (305)
T ss_dssp EEETTEEECTT------------SCCC-SCCCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTT
T ss_pred EecCCEEEecC------------CCCC-ccCCCC--CCCCCEEECcCCcCCCcChhHhhccccccccccccccccccchh
Confidence 35677676653 3343 345444 26899999999999855556789999999999999999977788
Q ss_pred hhhcCCCCceeeccCCcccccCCccccCCcCccEeeeeccccCccCCccccCCCCCCEEEccCCcCCccc---ccccCCC
Q 040495 141 NLSRRSNLIELSVDTNYLVGEIPSAIGSLFKLERLFIFHNHITGQLPASIGNLSSLLAFDVRENILWGRI---DSLVQLR 217 (443)
Q Consensus 141 ~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~---~~l~~l~ 217 (443)
.|.++++|++|++++|+++ .+|..+ ...++.|.+.+|.+.+..+..+.....+..++...+...... ..+..++
T Consensus 74 ~f~~l~~L~~L~l~~n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~ 150 (305)
T d1xkua_ 74 AFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMK 150 (305)
T ss_dssp TTTTCTTCCEEECCSSCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCT
T ss_pred hhhCCCccCEecccCCccC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCcccccccc
Confidence 8999999999999999988 566543 457888888888888665555666777777777666433222 3455566
Q ss_pred CCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEec
Q 040495 218 NLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEF 297 (443)
Q Consensus 218 ~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l 297 (443)
+|+.+++++|.+.. +|..+ .++|++|++++|..++..+..+. .++.+++|++++|++++..+..+..+++|++|++
T Consensus 151 ~L~~l~l~~n~l~~-l~~~~--~~~L~~L~l~~n~~~~~~~~~~~-~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L 226 (305)
T d1xkua_ 151 KLSYIRIADTNITT-IPQGL--PPSLTELHLDGNKITKVDAASLK-GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHL 226 (305)
T ss_dssp TCCEEECCSSCCCS-CCSSC--CTTCSEEECTTSCCCEECTGGGT-TCTTCCEEECCSSCCCEECTTTGGGSTTCCEEEC
T ss_pred ccCccccccCCccc-cCccc--CCccCEEECCCCcCCCCChhHhh-ccccccccccccccccccccccccccccceeeec
Confidence 66666666666542 23222 35566666666665544443332 5556666666666665555555555666666666
Q ss_pred ccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcC
Q 040495 298 SRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRF 356 (443)
Q Consensus 298 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l 356 (443)
++|+++. +|..+..+++|++|++++|+++......+..........+|+.|++++|++
T Consensus 227 ~~N~L~~-lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~ 284 (305)
T d1xkua_ 227 NNNKLVK-VPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284 (305)
T ss_dssp CSSCCSS-CCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred ccccccc-cccccccccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcC
Confidence 6666553 344555566666666666655544332222112233344455555555544
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.94 E-value=9.8e-25 Score=201.22 Aligned_cols=242 Identities=22% Similarity=0.314 Sum_probs=159.1
Q ss_pred CCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeeccCCcccccCCccccCCcCccEeeee
Q 040495 99 FLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVGEIPSAIGSLFKLERLFIF 178 (443)
Q Consensus 99 ~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~ 178 (443)
..+.++-++++++ .+|..+. +.+++|++++|.++...+..|.++++|++|++++|.+....|..|.++++|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 5677888888777 6676653 578899999998885445578888999999999998886667788888999999999
Q ss_pred ccccCccCCccccCCCCCCEEEccCCcCCccc-ccccCCCCCCEEEcccccCC--CCCCccccCCCCCcEEEcccCcCcc
Q 040495 179 HNHITGQLPASIGNLSSLLAFDVRENILWGRI-DSLVQLRNLRLLDIAFNHFS--GMIPPPIFNISSLEVISLSENRFTG 255 (443)
Q Consensus 179 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~-~~l~~l~~L~~L~l~~n~~~--~~~~~~l~~l~~L~~L~l~~n~l~~ 255 (443)
+|+++ .+|..+ ...++.+++..|.+.... ..+........++...+... ...+..+..+++|+.+++.+|.++
T Consensus 88 ~n~l~-~l~~~~--~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~- 163 (305)
T d1xkua_ 88 KNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 163 (305)
T ss_dssp SSCCS-BCCSSC--CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCccC-cCccch--hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-
Confidence 98887 455432 356777887777776655 44555566666666665432 223344556666666666666665
Q ss_pred cCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchh
Q 040495 256 SLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELD 335 (443)
Q Consensus 256 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 335 (443)
.+|.. .++++++|++++|...+..+..+..++.+++|++++|++++..+..+..+++|++|++++|.++.. +
T Consensus 164 ~l~~~---~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~l-p---- 235 (305)
T d1xkua_ 164 TIPQG---LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV-P---- 235 (305)
T ss_dssp SCCSS---CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSC-C----
T ss_pred ccCcc---cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccccc-c----
Confidence 44433 245666666666666655555666666666666666666655555555566666666666655543 2
Q ss_pred hHhhhcCCCCCCEEEccCCcCc
Q 040495 336 FINLLANCSKLERLYFNRNRFQ 357 (443)
Q Consensus 336 ~~~~~~~~~~L~~L~l~~n~l~ 357 (443)
..+..+++|++|++++|+++
T Consensus 236 --~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 236 --GGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp --TTTTTCSSCCEEECCSSCCC
T ss_pred --cccccccCCCEEECCCCccC
Confidence 23455555555555555555
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=1.8e-24 Score=197.28 Aligned_cols=222 Identities=22% Similarity=0.251 Sum_probs=116.0
Q ss_pred EeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeeccCCcccccCCccccCCcCccEeeee-ccc
Q 040495 103 INLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVGEIPSAIGSLFKLERLFIF-HNH 181 (443)
Q Consensus 103 L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~-~n~ 181 (443)
++.++++++ .+|..+. +.+++|++++|.++...+..|.++++|++|++++|.+....+..+..+..++.+... .+.
T Consensus 16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 344555544 4454332 345666666666654444455566666666666665554444444444555554433 223
Q ss_pred cCccCCccccCCCCCCEEEccCCcCCcccccccCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhh
Q 040495 182 ITGQLPASIGNLSSLLAFDVRENILWGRIDSLVQLRNLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDA 261 (443)
Q Consensus 182 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 261 (443)
++...+.. +..+++|++|++++|.+....+..+....+|+.+++++|.++ .+|...
T Consensus 93 ~~~l~~~~-----------------------~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~-~i~~~~ 148 (284)
T d1ozna_ 93 LRSVDPAT-----------------------FHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDT 148 (284)
T ss_dssp CCCCCTTT-----------------------TTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTT
T ss_pred cccccchh-----------------------hcccccCCEEecCCcccccccccccchhcccchhhhcccccc-ccChhH
Confidence 33222333 333444444444444444333344444555555555555554 344333
Q ss_pred hcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhc
Q 040495 262 GVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLA 341 (443)
Q Consensus 262 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~ 341 (443)
+..+++|++|++++|++++..+..+.++++|+.+++++|++++..|..|..+++|++|++++|.+.+..+ ..+.
T Consensus 149 f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~------~~~~ 222 (284)
T d1ozna_ 149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPT------EALA 222 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCH------HHHT
T ss_pred hccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccc------cccc
Confidence 3345555555555555554445555556666666666666665555555556666666666665555444 4455
Q ss_pred CCCCCCEEEccCCcCc
Q 040495 342 NCSKLERLYFNRNRFQ 357 (443)
Q Consensus 342 ~~~~L~~L~l~~n~l~ 357 (443)
.+++|++|++++|++.
T Consensus 223 ~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 223 PLRALQYLRLNDNPWV 238 (284)
T ss_dssp TCTTCCEEECCSSCEE
T ss_pred cccccCEEEecCCCCC
Confidence 5566666666666555
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=2.1e-24 Score=196.81 Aligned_cols=225 Identities=18% Similarity=0.159 Sum_probs=174.2
Q ss_pred EEcCCCCCcccccccccCCCCCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeecc-CCc
Q 040495 79 LDLRNQSIGGPLSPYVGNLSFLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVD-TNY 157 (443)
Q Consensus 79 L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~-~n~ 157 (443)
++.++.+++ .+|..+. +.+++|+|++|.++...+.+|.++++|++|++++|.+....+..+..++.++.+... .+.
T Consensus 16 v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~ 92 (284)
T d1ozna_ 16 TSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (284)
T ss_dssp EECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred EEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 355566655 3454332 578999999999986666789999999999999999998888888889999998765 455
Q ss_pred ccccCCccccCCcCccEeeeeccccCccCCccccCCCCCCEEEccCCcCCcccccccCCCCCCEEEcccccCCCCCCccc
Q 040495 158 LVGEIPSAIGSLFKLERLFIFHNHITGQLPASIGNLSSLLAFDVRENILWGRIDSLVQLRNLRLLDIAFNHFSGMIPPPI 237 (443)
Q Consensus 158 l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l 237 (443)
+....+..+.++++|++|++++|.+....+..+... ++|+.+++++|.+++..+..+
T Consensus 93 ~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~-----------------------~~L~~l~l~~N~l~~i~~~~f 149 (284)
T d1ozna_ 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGL-----------------------AALQYLYLQDNALQALPDDTF 149 (284)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC-----------------------TTCCEEECCSSCCCCCCTTTT
T ss_pred cccccchhhcccccCCEEecCCcccccccccccchh-----------------------cccchhhhccccccccChhHh
Confidence 665567788999999999999998875544444444 445555555666654445566
Q ss_pred cCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCC
Q 040495 238 FNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLS 317 (443)
Q Consensus 238 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 317 (443)
..+++|++|++++|.++ .++...+.++++|+.+++++|++++..|..|..+++|++|++++|++.+..+..|+.+++|+
T Consensus 150 ~~~~~L~~L~l~~N~l~-~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~ 228 (284)
T d1ozna_ 150 RDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228 (284)
T ss_dssp TTCTTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred ccccchhhcccccCccc-ccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccC
Confidence 67777788888888776 55555555788888888888888877888888888999999999999888888888899999
Q ss_pred EEEccCCCCcccC
Q 040495 318 FLNMGINNLGTRT 330 (443)
Q Consensus 318 ~L~l~~n~l~~~~ 330 (443)
+|++++|.+...-
T Consensus 229 ~L~l~~N~l~C~C 241 (284)
T d1ozna_ 229 YLRLNDNPWVCDC 241 (284)
T ss_dssp EEECCSSCEECSG
T ss_pred EEEecCCCCCCCc
Confidence 9999999887653
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=2.4e-22 Score=181.11 Aligned_cols=196 Identities=19% Similarity=0.271 Sum_probs=93.6
Q ss_pred CCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecc
Q 040495 219 LRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFS 298 (443)
Q Consensus 219 L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~ 298 (443)
+.+++.+++.++ .+|..+. +++++|++++|.++ .+|...+.++++|++|++++|+++ .++ .++.+++|++|+++
T Consensus 12 ~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~L~~N~l~-~l~-~~~~l~~L~~L~Ls 85 (266)
T d1p9ag_ 12 HLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELT-KLQ-VDGTLPVLGTLDLS 85 (266)
T ss_dssp CCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCC-EEE-CCSCCTTCCEEECC
T ss_pred CeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCC-CcCHHHhhcccccccccccccccc-ccc-cccccccccccccc
Confidence 333444444444 2333332 24455555555554 333333334555555555555554 222 23444555555555
Q ss_pred cCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEeccC
Q 040495 299 RNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGR 378 (443)
Q Consensus 299 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~ 378 (443)
+|++++. +..+..+++|+.|++++|.+....+ ..+..+.++++|++++|.++ .+|.......+.++.+++++
T Consensus 86 ~N~l~~~-~~~~~~l~~L~~L~l~~~~~~~~~~------~~~~~l~~l~~L~l~~n~l~-~l~~~~~~~l~~l~~l~l~~ 157 (266)
T d1p9ag_ 86 HNQLQSL-PLLGQTLPALTVLDVSFNRLTSLPL------GALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLAN 157 (266)
T ss_dssp SSCCSSC-CCCTTTCTTCCEEECCSSCCCCCCS------STTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECTT
T ss_pred ccccccc-ccccccccccccccccccccceeec------cccccccccccccccccccc-eeccccccccccchhccccc
Confidence 5555432 3334455555555555555544433 33444555555555555555 33332222234555555555
Q ss_pred CcCeecCchhhhcCCCCCeEeCcCCcCcccCchhhcCCCCCCEEEccCCcC
Q 040495 379 NRISGTIPPGIRSHANLNWLTMDSNLFTGTIPPVIGELKNLQLLDLGGNFL 429 (443)
Q Consensus 379 n~l~~~~p~~l~~~~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l 429 (443)
|++++..+..+..+++|++|+|++|+++ .+|+.+..+++|+.|+|++|++
T Consensus 158 N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred ccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCC
Confidence 5555444444555555555555555555 5555555555555555555544
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=5.4e-22 Score=178.77 Aligned_cols=133 Identities=23% Similarity=0.235 Sum_probs=65.7
Q ss_pred CCCCCEEEccCCcCCcccccccCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEe
Q 040495 193 LSSLLAFDVRENILWGRIDSLVQLRNLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLS 272 (443)
Q Consensus 193 l~~L~~L~l~~n~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ 272 (443)
+++|++|++++|.+......+..+++|+.|++++|.+....+..+..+.++++|++++|.++ .+|...+..+++++.++
T Consensus 76 l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~-~l~~~~~~~l~~l~~l~ 154 (266)
T d1p9ag_ 76 LPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLS 154 (266)
T ss_dssp CTTCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccccccccccccccccceeeccccccccccccccccccccc-eeccccccccccchhcc
Confidence 33344444443333333333344445555555555554444444445555555555555554 44444443455555555
Q ss_pred CCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCc
Q 040495 273 PNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLG 327 (443)
Q Consensus 273 L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 327 (443)
+++|++++..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|.+.
T Consensus 155 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 5555555444444555555555555555555 34444444555555555555443
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.85 E-value=1e-18 Score=163.42 Aligned_cols=309 Identities=22% Similarity=0.276 Sum_probs=211.2
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeecc
Q 040495 75 RVTRLDLRNQSIGGPLSPYVGNLSFLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVD 154 (443)
Q Consensus 75 ~v~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~ 154 (443)
++++||+++++++. +|+. .++|++|++++|.++ .+|+. ..+|+.|++++|.++ .++.. .+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~~-lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSDL---PPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCSC---CTTCCEEECC
T ss_pred CCCEEEeCCCCCCC-CCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhhh---cccccccccc
Confidence 57799999999864 6643 578999999999998 77764 457889999999887 44431 2469999999
Q ss_pred CCcccccCCccccCCcCccEeeeeccccCccCCccccCCCCCCEEEccCCcCCcccccccCCCCCCEEEcccccCCCCCC
Q 040495 155 TNYLVGEIPSAIGSLFKLERLFIFHNHITGQLPASIGNLSSLLAFDVRENILWGRIDSLVQLRNLRLLDIAFNHFSGMIP 234 (443)
Q Consensus 155 ~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~ 234 (443)
+|.+. .+|. ++.+++|++++++++.+.. .+. ....+..+.+..+.... ...+..++.++.+++++|..... +
T Consensus 107 ~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~-~~~---~~~~l~~l~~~~~~~~~-~~~l~~l~~l~~L~l~~n~~~~~-~ 178 (353)
T d1jl5a_ 107 NNQLE-KLPE-LQNSSFLKIIDVDNNSLKK-LPD---LPPSLEFIAAGNNQLEE-LPELQNLPFLTAIYADNNSLKKL-P 178 (353)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSSCCSSC-C
T ss_pred ccccc-cccc-hhhhccceeeccccccccc-ccc---ccccccchhhccccccc-cccccccccceeccccccccccc-c
Confidence 99987 5664 5788999999999988773 332 24566677766554332 24566778888899988876532 2
Q ss_pred ccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCC
Q 040495 235 PPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLK 314 (443)
Q Consensus 235 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 314 (443)
. .....+.+...++.+. .++.. . .++.++.+++++|... .++. ...++..+.+.++.+.... ...+
T Consensus 179 ~---~~~~~~~l~~~~~~~~-~~~~~-~-~l~~L~~l~l~~n~~~-~~~~---~~~~l~~~~~~~~~~~~~~----~~~~ 244 (353)
T d1jl5a_ 179 D---LPLSLESIVAGNNILE-ELPEL-Q-NLPFLTTIYADNNLLK-TLPD---LPPSLEALNVRDNYLTDLP----ELPQ 244 (353)
T ss_dssp C---CCTTCCEEECCSSCCS-SCCCC-T-TCTTCCEEECCSSCCS-SCCS---CCTTCCEEECCSSCCSCCC----CCCT
T ss_pred c---cccccccccccccccc-ccccc-c-cccccccccccccccc-cccc---ccccccccccccccccccc----cccc
Confidence 1 1223456666666554 44432 2 5788999999988766 3343 3456788888888776432 2245
Q ss_pred CCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEeccCCcCeecCchhhhcCCC
Q 040495 315 NLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGRNRISGTIPPGIRSHAN 394 (443)
Q Consensus 315 ~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~~~~ 394 (443)
.+...++..+.+.+... -.......++..+.+.+ ++ ..+++|++|++++|+++ .+|.. +++
T Consensus 245 ~l~~~~~~~~~~~~l~~----------l~~~~~~~~~~~~~~~~-~~----~~~~~L~~L~Ls~N~l~-~lp~~---~~~ 305 (353)
T d1jl5a_ 245 SLTFLDVSENIFSGLSE----------LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLI-ELPAL---PPR 305 (353)
T ss_dssp TCCEEECCSSCCSEESC----------CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCS-CCCCC---CTT
T ss_pred ccccccccccccccccc----------ccchhcccccccCcccc-cc----ccCCCCCEEECCCCccC-ccccc---cCC
Confidence 66777777666554322 11345666777776663 22 22478999999999888 67743 567
Q ss_pred CCeEeCcCCcCcccCchhhcCCCCCCEEEccCCcCcccCCccccCCC
Q 040495 395 LNWLTMDSNLFTGTIPPVIGELKNLQLLDLGGNFLQGSIPSSLGNLT 441 (443)
Q Consensus 395 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 441 (443)
|++|+|++|+++ .+|+. +++|++|++++|+++ .+|+....+.
T Consensus 306 L~~L~L~~N~L~-~l~~~---~~~L~~L~L~~N~L~-~lp~~~~~L~ 347 (353)
T d1jl5a_ 306 LERLIASFNHLA-EVPEL---PQNLKQLHVEYNPLR-EFPDIPESVE 347 (353)
T ss_dssp CCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCS-SCCCCCTTCC
T ss_pred CCEEECCCCcCC-ccccc---cCCCCEEECcCCcCC-CCCccccccC
Confidence 889999999988 67753 467899999999987 6665444443
No 12
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=9.8e-23 Score=198.07 Aligned_cols=362 Identities=15% Similarity=0.132 Sum_probs=235.3
Q ss_pred CcEEEEEcCCCCCccc-ccccccCCCCCCEEeCCCCcCCC----CCchhhcCCCccCeEEccCCCCCCCCChhhh-----
Q 040495 74 QRVTRLDLRNQSIGGP-LSPYVGNLSFLRYINLANNGFLG----EIPPQIGRLNMLEGLVLSNNSFSGTIPTNLS----- 143 (443)
Q Consensus 74 ~~v~~L~l~~~~~~~~-~~~~~~~l~~L~~L~L~~n~~~~----~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~----- 143 (443)
.+++.||++++++++. +...+..++++++|+|++|+++. .+...+..+++|++|++++|.++......+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 3689999999999864 34456678999999999999874 3456678899999999999988632222222
Q ss_pred cCCCCceeeccCCccccc----CCccccCCcCccEeeeeccccCccCCcc------------------------------
Q 040495 144 RRSNLIELSVDTNYLVGE----IPSAIGSLFKLERLFIFHNHITGQLPAS------------------------------ 189 (443)
Q Consensus 144 ~l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~l~~n~l~~~~~~~------------------------------ 189 (443)
...+|++|++++|+++.. ++..+..+++|++|++++|.++......
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 161 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccc
Confidence 235799999999998743 4556788899999999999875321111
Q ss_pred ---ccCCCCCCEEEccCCcCCccc-----ccc-cCCCCCCEEEcccccCCCC----CCccccCCCCCcEEEcccCcCccc
Q 040495 190 ---IGNLSSLLAFDVRENILWGRI-----DSL-VQLRNLRLLDIAFNHFSGM----IPPPIFNISSLEVISLSENRFTGS 256 (443)
Q Consensus 190 ---l~~l~~L~~L~l~~n~l~~~~-----~~l-~~l~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~l~~n~l~~~ 256 (443)
+.....++.++++.+...... ..+ ........+++..+.+... ....+...+.++.+.+.+|.+...
T Consensus 162 ~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~ 241 (460)
T d1z7xw1 162 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 241 (460)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhcccccc
Confidence 111233444444443322111 001 1112344455554443311 011233456788888888766421
Q ss_pred ----CChhhhcCCCCCcEEeCCCCcCCcc----CCccCcCCCCCCEEecccCcCccccchhh-----hCCCCCCEEEccC
Q 040495 257 ----LPVDAGVNLPNLRQLSPNGNNFTGS----IPVSLSNASRLEMIEFSRNQFSGRVSVDF-----SRLKNLSFLNMGI 323 (443)
Q Consensus 257 ----~~~~~~~~~~~L~~L~L~~n~l~~~----~~~~l~~~~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~ 323 (443)
...........++.+++++|.+... ....+...+.++.+++++|.+++.....+ .....|+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~ 321 (460)
T d1z7xw1 242 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 321 (460)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred ccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccc
Confidence 1122223467889999998887643 22345567888999999998875433322 2346799999999
Q ss_pred CCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCC----hhHhhhccCCCEEeccCCcCeec----CchhhhcCCCC
Q 040495 324 NNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLP----QSMANFSSTIKQIAMGRNRISGT----IPPGIRSHANL 395 (443)
Q Consensus 324 n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p----~~~~~~~~~L~~L~L~~n~l~~~----~p~~l~~~~~L 395 (443)
+.++...... +...+..+++|++|++++|++++... ..+....+.|++|+|++|.+++. ++..+..+++|
T Consensus 322 ~~l~~~~~~~--l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L 399 (460)
T d1z7xw1 322 CSFTAACCSH--FSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 399 (460)
T ss_dssp SCCBGGGHHH--HHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred cchhhhhhhh--cccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCC
Confidence 8887654322 22455677889999999999875432 23322235699999999999864 45567778999
Q ss_pred CeEeCcCCcCcccCch----hhc-CCCCCCEEEccCCcCcccCCccc
Q 040495 396 NWLTMDSNLFTGTIPP----VIG-ELKNLQLLDLGGNFLQGSIPSSL 437 (443)
Q Consensus 396 ~~L~L~~n~~~~~~p~----~~~-~l~~L~~L~l~~n~l~~~~p~~~ 437 (443)
++|+|++|+++..... .+. +...|+.|++.+|.+..+.++.+
T Consensus 400 ~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~~~~~~l 446 (460)
T d1z7xw1 400 RELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRL 446 (460)
T ss_dssp CEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHHH
T ss_pred CEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCHHHHHHH
Confidence 9999999998754333 333 34579999999999886555433
No 13
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.83 E-value=5.9e-18 Score=158.17 Aligned_cols=295 Identities=24% Similarity=0.293 Sum_probs=211.8
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeec
Q 040495 74 QRVTRLDLRNQSIGGPLSPYVGNLSFLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSV 153 (443)
Q Consensus 74 ~~v~~L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l 153 (443)
.+++.|++++|+++ .+|+. +.+|+.|++++|.++ .++. + .+.|++|++++|.+. .+|. +..+++|++|++
T Consensus 58 ~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~-~l~~-l--p~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l 127 (353)
T d1jl5a_ 58 PHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLK-ALSD-L--PPLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDV 127 (353)
T ss_dssp TTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCS-CCCS-C--CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEEC
T ss_pred CCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccc-hhhh-h--ccccccccccccccc-cccc-hhhhccceeecc
Confidence 57899999999997 45654 468999999999887 3432 1 246999999999998 5664 678999999999
Q ss_pred cCCcccccCCccccCCcCccEeeeeccccCccCCccccCCCCCCEEEccCCcCCcccccccCCCCCCEEEcccccCCCCC
Q 040495 154 DTNYLVGEIPSAIGSLFKLERLFIFHNHITGQLPASIGNLSSLLAFDVRENILWGRIDSLVQLRNLRLLDIAFNHFSGMI 233 (443)
Q Consensus 154 ~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~l~~l~~L~~L~l~~n~~~~~~ 233 (443)
+++.+. ..+.. ...+..+.+..+... .+..+..++.++.+.+.+|........ ....+.+...++.+. .+
T Consensus 128 ~~~~~~-~~~~~---~~~l~~l~~~~~~~~--~~~~l~~l~~l~~L~l~~n~~~~~~~~---~~~~~~l~~~~~~~~-~~ 197 (353)
T d1jl5a_ 128 DNNSLK-KLPDL---PPSLEFIAAGNNQLE--ELPELQNLPFLTAIYADNNSLKKLPDL---PLSLESIVAGNNILE-EL 197 (353)
T ss_dssp CSSCCS-CCCCC---CTTCCEEECCSSCCS--SCCCCTTCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCS-SC
T ss_pred cccccc-ccccc---cccccchhhcccccc--ccccccccccceecccccccccccccc---ccccccccccccccc-cc
Confidence 999887 33332 356777777666554 344577889999999999876654422 123455666655544 23
Q ss_pred CccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCC
Q 040495 234 PPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRL 313 (443)
Q Consensus 234 ~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l 313 (443)
..+..++.|+.+++++|... .++. ...++..+.+..+.+.. .+. ....+...++..+.+.+... -.
T Consensus 198 -~~~~~l~~L~~l~l~~n~~~-~~~~----~~~~l~~~~~~~~~~~~-~~~---~~~~l~~~~~~~~~~~~l~~----l~ 263 (353)
T d1jl5a_ 198 -PELQNLPFLTTIYADNNLLK-TLPD----LPPSLEALNVRDNYLTD-LPE---LPQSLTFLDVSENIFSGLSE----LP 263 (353)
T ss_dssp -CCCTTCTTCCEEECCSSCCS-SCCS----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSEESC----CC
T ss_pred -cccccccccccccccccccc-cccc----ccccccccccccccccc-ccc---cccccccccccccccccccc----cc
Confidence 34667899999999998876 4543 35678899999988763 232 24567777777776654211 11
Q ss_pred CCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEeccCCcCeecCchhhhcCC
Q 040495 314 KNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGRNRISGTIPPGIRSHA 393 (443)
Q Consensus 314 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~~~ 393 (443)
......++..+.+.+.. ..+++|++|++++|+++ .+|.. .++|+.|++++|+++ .+|.. ++
T Consensus 264 ~~~~~~~~~~~~~~~~~----------~~~~~L~~L~Ls~N~l~-~lp~~----~~~L~~L~L~~N~L~-~l~~~---~~ 324 (353)
T d1jl5a_ 264 PNLYYLNASSNEIRSLC----------DLPPSLEELNVSNNKLI-ELPAL----PPRLERLIASFNHLA-EVPEL---PQ 324 (353)
T ss_dssp TTCCEEECCSSCCSEEC----------CCCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCS-CCCCC---CT
T ss_pred chhcccccccCcccccc----------ccCCCCCEEECCCCccC-ccccc----cCCCCEEECCCCcCC-ccccc---cC
Confidence 34566777777666543 24678999999999998 77754 368999999999998 67753 46
Q ss_pred CCCeEeCcCCcCcccCchhhcCCCCCCEEEcc
Q 040495 394 NLNWLTMDSNLFTGTIPPVIGELKNLQLLDLG 425 (443)
Q Consensus 394 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~ 425 (443)
+|++|++++|+++ .+|+. ..+|+.|.+.
T Consensus 325 ~L~~L~L~~N~L~-~lp~~---~~~L~~L~~~ 352 (353)
T d1jl5a_ 325 NLKQLHVEYNPLR-EFPDI---PESVEDLRMN 352 (353)
T ss_dssp TCCEEECCSSCCS-SCCCC---CTTCCEEECC
T ss_pred CCCEEECcCCcCC-CCCcc---ccccCeeECc
Confidence 8999999999988 78864 3467777764
No 14
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.78 E-value=1.4e-18 Score=152.17 Aligned_cols=188 Identities=22% Similarity=0.319 Sum_probs=85.7
Q ss_pred CEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeeccCCcccccCCccccCCcCccEeeeecc
Q 040495 101 RYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVGEIPSAIGSLFKLERLFIFHN 180 (443)
Q Consensus 101 ~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n 180 (443)
..+++..+.+++.. .++.+.+|++|++.+|.++ .++ .+..+++|++|++++|.+++.. .+..+++++++++++|
T Consensus 22 ~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~ls~n~i~~~~--~l~~l~~l~~l~~~~n 95 (227)
T d1h6ua2 22 IKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLA--PLKNLTKITELELSGN 95 (227)
T ss_dssp HHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCG--GGTTCCSCCEEECCSC
T ss_pred HHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCC-cch-hHhcCCCCcEeecCCceeeccc--cccccccccccccccc
Confidence 33445555554432 2344556666666666665 232 3555666666666666554322 1455555555555555
Q ss_pred ccCccCCccccCCCCCCEEEccCCcCCcccccccCCCCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChh
Q 040495 181 HITGQLPASIGNLSSLLAFDVRENILWGRIDSLVQLRNLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVD 260 (443)
Q Consensus 181 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 260 (443)
.++. ++ .+..+ ++|+.++++++...+. ..+...+.++.+.++++.+....+
T Consensus 96 ~~~~-i~-~l~~l-----------------------~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~-- 146 (227)
T d1h6ua2 96 PLKN-VS-AIAGL-----------------------QSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNISP-- 146 (227)
T ss_dssp CCSC-CG-GGTTC-----------------------TTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCCGG--
T ss_pred cccc-cc-ccccc-----------------------cccccccccccccccc--chhccccchhhhhchhhhhchhhh--
Confidence 4441 11 23334 4444444444433221 123333444445544444432111
Q ss_pred hhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcc
Q 040495 261 AGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGT 328 (443)
Q Consensus 261 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 328 (443)
+. ..++|++|++++|.+.+.. .+.++++|++|++++|++++. + .++.+++|++|++++|++++
T Consensus 147 ~~-~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~ 209 (227)
T d1h6ua2 147 LA-GLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISD 209 (227)
T ss_dssp GG-GCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred hc-cccccccccccccccccch--hhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCC
Confidence 11 3445555555555444211 244445555555555554432 1 14444555555555554443
No 15
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=6.4e-20 Score=177.92 Aligned_cols=333 Identities=17% Similarity=0.205 Sum_probs=224.9
Q ss_pred CCCCEEeCCCCcCCCC-CchhhcCCCccCeEEccCCCCCC----CCChhhhcCCCCceeeccCCccccc----CCcccc-
Q 040495 98 SFLRYINLANNGFLGE-IPPQIGRLNMLEGLVLSNNSFSG----TIPTNLSRRSNLIELSVDTNYLVGE----IPSAIG- 167 (443)
Q Consensus 98 ~~L~~L~L~~n~~~~~-~~~~l~~l~~L~~L~l~~n~~~~----~~p~~l~~l~~L~~L~l~~n~l~~~----~p~~l~- 167 (443)
++|++||++++++++. +.+.+..++++++|++++|.++. .++..+..+++|++|++++|.++.. +...+.
T Consensus 2 ~~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~ 81 (460)
T d1z7xw1 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 81 (460)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred CCCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhc
Confidence 3689999999999864 24446678999999999999873 2345567899999999999998632 222332
Q ss_pred CCcCccEeeeeccccCcc----CCccccCCCCCCEEEccCCcCCccc-c----c--------------------------
Q 040495 168 SLFKLERLFIFHNHITGQ----LPASIGNLSSLLAFDVRENILWGRI-D----S-------------------------- 212 (443)
Q Consensus 168 ~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~-~----~-------------------------- 212 (443)
...+|++|++++|.+++. ++..+..+++|++|++++|.+.... . .
T Consensus 82 ~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (460)
T d1z7xw1 82 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 161 (460)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCCCCEEECCCCCccccccccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccc
Confidence 235799999999998754 3455678899999999999765321 0 0
Q ss_pred ---ccCCCCCCEEEcccccCCCCC----Cccc-cCCCCCcEEEcccCcCcccCC---hhhhcCCCCCcEEeCCCCcCCc-
Q 040495 213 ---LVQLRNLRLLDIAFNHFSGMI----PPPI-FNISSLEVISLSENRFTGSLP---VDAGVNLPNLRQLSPNGNNFTG- 280 (443)
Q Consensus 213 ---l~~l~~L~~L~l~~n~~~~~~----~~~l-~~l~~L~~L~l~~n~l~~~~~---~~~~~~~~~L~~L~L~~n~l~~- 280 (443)
+.....++.++++++...... ...+ ........+++.++.+...-. .......+.++.+.+.+|.+..
T Consensus 162 ~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~ 241 (460)
T d1z7xw1 162 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 241 (460)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhcccccc
Confidence 011234555555544332110 0001 112345567776665542110 1112246788999999887643
Q ss_pred ----cCCccCcCCCCCCEEecccCcCcccc----chhhhCCCCCCEEEccCCCCcccCCCchhhHhh-hcCCCCCCEEEc
Q 040495 281 ----SIPVSLSNASRLEMIEFSRNQFSGRV----SVDFSRLKNLSFLNMGINNLGTRTANELDFINL-LANCSKLERLYF 351 (443)
Q Consensus 281 ----~~~~~l~~~~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~-~~~~~~L~~L~l 351 (443)
...........++.+++++|.+.... ...+...+.++.+++++|.+++.....+. .. ......|+.+++
T Consensus 242 ~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~--~~l~~~~~~L~~l~l 319 (460)
T d1z7xw1 242 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLC--ETLLEPGCQLESLWV 319 (460)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHH--HHHTSTTCCCCEEEC
T ss_pred ccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhh--ccccccccccccccc
Confidence 22334456778999999999887542 23356788999999999988754332111 12 234568999999
Q ss_pred cCCcCcccCChhHhhh---ccCCCEEeccCCcCeec----Cchhhh-cCCCCCeEeCcCCcCccc----CchhhcCCCCC
Q 040495 352 NRNRFQGVLPQSMANF---SSTIKQIAMGRNRISGT----IPPGIR-SHANLNWLTMDSNLFTGT----IPPVIGELKNL 419 (443)
Q Consensus 352 ~~n~l~~~~p~~~~~~---~~~L~~L~L~~n~l~~~----~p~~l~-~~~~L~~L~L~~n~~~~~----~p~~~~~l~~L 419 (443)
++|.++......+... .++|+.|+|++|++++. ++..+. ..+.|++|+|++|.++.. +++.+..+++|
T Consensus 320 ~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L 399 (460)
T d1z7xw1 320 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 399 (460)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred cccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCC
Confidence 9999886544444332 36899999999999864 334443 467799999999999843 55667778999
Q ss_pred CEEEccCCcCccc
Q 040495 420 QLLDLGGNFLQGS 432 (443)
Q Consensus 420 ~~L~l~~n~l~~~ 432 (443)
++|||++|+++.+
T Consensus 400 ~~L~Ls~N~i~~~ 412 (460)
T d1z7xw1 400 RELDLSNNCLGDA 412 (460)
T ss_dssp CEEECCSSSCCHH
T ss_pred CEEECCCCcCCHH
Confidence 9999999999854
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1.9e-17 Score=144.89 Aligned_cols=186 Identities=20% Similarity=0.353 Sum_probs=103.6
Q ss_pred CCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEe
Q 040495 217 RNLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIE 296 (443)
Q Consensus 217 ~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~ 296 (443)
.+|+.|++.+|.++. + +.+..+++|++|++++|.+++..| + ..+++++.+++++|.++ .++ .+..+++|+.++
T Consensus 41 ~~L~~L~l~~~~i~~-l-~~l~~l~~L~~L~ls~n~i~~~~~--l-~~l~~l~~l~~~~n~~~-~i~-~l~~l~~L~~l~ 113 (227)
T d1h6ua2 41 DGITTLSAFGTGVTT-I-EGVQYLNNLIGLELKDNQITDLAP--L-KNLTKITELELSGNPLK-NVS-AIAGLQSIKTLD 113 (227)
T ss_dssp HTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--G-TTCCSCCEEECCSCCCS-CCG-GGTTCTTCCEEE
T ss_pred CCcCEEECCCCCCCc-c-hhHhcCCCCcEeecCCceeecccc--c-ccccccccccccccccc-ccc-cccccccccccc
Confidence 344444444444432 1 224444555555555554442211 1 14555555555555554 222 345556666666
Q ss_pred cccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEec
Q 040495 297 FSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAM 376 (443)
Q Consensus 297 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L 376 (443)
++++...+.. .+...+.++.+.++.+.+....+ +..+++|++|++++|.+.+..+ +.. +++|+.|++
T Consensus 114 l~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~L~~L~l~~n~~~~~~~--l~~-l~~L~~L~L 180 (227)
T d1h6ua2 114 LTSTQITDVT--PLAGLSNLQVLYLDLNQITNISP--------LAGLTNLQYLSIGNAQVSDLTP--LAN-LSKLTTLKA 180 (227)
T ss_dssp CTTSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG--------GGGCTTCCEEECCSSCCCCCGG--GTT-CTTCCEEEC
T ss_pred cccccccccc--hhccccchhhhhchhhhhchhhh--------hccccccccccccccccccchh--hcc-cccceeccc
Confidence 6665554322 24455666666666665554322 5556677777777776653222 444 367777777
Q ss_pred cCCcCeecCchhhhcCCCCCeEeCcCCcCcccCchhhcCCCCCCEEEccC
Q 040495 377 GRNRISGTIPPGIRSHANLNWLTMDSNLFTGTIPPVIGELKNLQLLDLGG 426 (443)
Q Consensus 377 ~~n~l~~~~p~~l~~~~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l~~ 426 (443)
++|++++ ++ .++.+++|++|++++|+++ .++. +.++++|++|++++
T Consensus 181 s~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt-~i~~-l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 181 DDNKISD-IS-PLASLPNLIEVHLKNNQIS-DVSP-LANTSNLFIVTLTN 226 (227)
T ss_dssp CSSCCCC-CG-GGGGCTTCCEEECTTSCCC-BCGG-GTTCTTCCEEEEEE
T ss_pred CCCccCC-Ch-hhcCCCCCCEEECcCCcCC-CCcc-cccCCCCCEEEeeC
Confidence 7777764 33 3677777888888888777 4442 67778888887763
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=6.8e-18 Score=149.38 Aligned_cols=102 Identities=17% Similarity=0.142 Sum_probs=63.5
Q ss_pred EEcCCCCCcccccccccCCCCCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCC-ChhhhcCCCCceeeccC-C
Q 040495 79 LDLRNQSIGGPLSPYVGNLSFLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTI-PTNLSRRSNLIELSVDT-N 156 (443)
Q Consensus 79 L~l~~~~~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~-p~~l~~l~~L~~L~l~~-n 156 (443)
++.++.+++ .+|+.+ .+++++|++++|.++...+.+|.++++|++|++++|.+...+ +..|.++++++++.+.. +
T Consensus 13 i~c~~~~l~-~iP~~l--~~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n 89 (242)
T d1xwdc1 13 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89 (242)
T ss_dssp EEEESCSCS-SCCSCS--CSCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCT
T ss_pred EEEeCCCCC-CcCCCC--CCCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccc
Confidence 333344444 344433 246788888888777444456777778888888777776443 34566677777776543 4
Q ss_pred cccccCCccccCCcCccEeeeeccccC
Q 040495 157 YLVGEIPSAIGSLFKLERLFIFHNHIT 183 (443)
Q Consensus 157 ~l~~~~p~~l~~l~~L~~L~l~~n~l~ 183 (443)
.+....+..+.++++|+++++++|.+.
T Consensus 90 ~l~~~~~~~~~~l~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 90 NLLYINPEAFQNLPNLQYLLISNTGIK 116 (242)
T ss_dssp TCCEECTTSEECCTTCCEEEEESCCCC
T ss_pred cccccccccccccccccccccchhhhc
Confidence 555555556666777777777776665
No 18
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.72 E-value=1.7e-17 Score=141.14 Aligned_cols=129 Identities=21% Similarity=0.233 Sum_probs=80.7
Q ss_pred CEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEeccc
Q 040495 220 RLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSR 299 (443)
Q Consensus 220 ~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~ 299 (443)
+.++.++++++ .+|..+. +++++|++++|.+++.++...+..+++|++|++++|++....+..+..+++|++|++++
T Consensus 11 ~~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~ 87 (192)
T d1w8aa_ 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecc
Confidence 34556666555 3454432 45666666666666445555544566666666666666666666666666666666666
Q ss_pred CcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCc
Q 040495 300 NQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQ 357 (443)
Q Consensus 300 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 357 (443)
|++++..+..|.++++|++|+|++|.+++..+ ..|..+++|++|++++|.+.
T Consensus 88 N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~------~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMP------GSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECT------TSSTTCTTCCEEECTTCCBC
T ss_pred ccccccCHHHHhCCCcccccccCCccccccCH------HHhcCCcccccccccccccc
Confidence 66666666666666666666666666666655 44566666666666666665
No 19
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=3.5e-17 Score=144.71 Aligned_cols=103 Identities=22% Similarity=0.245 Sum_probs=58.6
Q ss_pred CeEEccCCCCCCCCChhhhcCCCCceeeccCCcccccCCccccCCcCccEeeeeccccCccC-CccccCCCCCCEEEccC
Q 040495 125 EGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVGEIPSAIGSLFKLERLFIFHNHITGQL-PASIGNLSSLLAFDVRE 203 (443)
Q Consensus 125 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~-~~~l~~l~~L~~L~l~~ 203 (443)
++++.++..++ .+|..+. +++++|++++|.++...+..|.++++|++|++++|.+...+ +..+..++.++++.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 56667666666 5565442 46777777777776333345666777777777777665433 23455566666665543
Q ss_pred -CcCCccc-ccccCCCCCCEEEcccccCC
Q 040495 204 -NILWGRI-DSLVQLRNLRLLDIAFNHFS 230 (443)
Q Consensus 204 -n~l~~~~-~~l~~l~~L~~L~l~~n~~~ 230 (443)
+.+.... ..+..+++|+++++++|.+.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~ 116 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIK 116 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCC
T ss_pred cccccccccccccccccccccccchhhhc
Confidence 3333333 34455555555555555544
No 20
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=1.4e-16 Score=136.24 Aligned_cols=160 Identities=23% Similarity=0.351 Sum_probs=71.0
Q ss_pred CCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEE
Q 040495 240 ISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFL 319 (443)
Q Consensus 240 l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 319 (443)
+.++++|+++++.++ .++ .+. .+++|++|++++|++++..| ++++++|++|++++|.+.... .+..+++|+.+
T Consensus 39 l~~l~~L~l~~~~i~-~l~-~l~-~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~--~l~~l~~L~~L 111 (199)
T d2omxa2 39 LDQVTTLQADRLGIK-SID-GVE-YLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT--PLANLTNLTGL 111 (199)
T ss_dssp HTTCCEEECTTSCCC-CCT-TGG-GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG--GGTTCTTCSEE
T ss_pred hcCCCEEECCCCCCC-Ccc-ccc-cCCCcCcCccccccccCccc--ccCCccccccccccccccccc--ccccccccccc
Confidence 445555555555554 332 122 34555555555555543221 445555555555555444221 24445555555
Q ss_pred EccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEeccCCcCeecCchhhhcCCCCCeEe
Q 040495 320 NMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGRNRISGTIPPGIRSHANLNWLT 399 (443)
Q Consensus 320 ~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~ 399 (443)
+++++......+ +..+++|+.|++++|++. .++ .+.. .++++.|++++|++++ ++ .++.+++|++|+
T Consensus 112 ~l~~~~~~~~~~--------~~~l~~L~~L~l~~n~l~-~~~-~l~~-~~~L~~L~l~~n~l~~-l~-~l~~l~~L~~L~ 178 (199)
T d2omxa2 112 TLFNNQITDIDP--------LKNLTNLNRLELSSNTIS-DIS-ALSG-LTSLQQLNFSSNQVTD-LK-PLANLTTLERLD 178 (199)
T ss_dssp ECCSSCCCCCGG--------GTTCTTCSEEECCSSCCC-CCG-GGTT-CTTCSEEECCSSCCCC-CG-GGTTCTTCCEEE
T ss_pred cccccccccccc--------cchhhhhHHhhhhhhhhc-ccc-cccc-cccccccccccccccC-Cc-cccCCCCCCEEE
Confidence 555444433221 344445555555555444 222 1222 2444445554444442 21 244444444444
Q ss_pred CcCCcCcccCchhhcCCCCCCE
Q 040495 400 MDSNLFTGTIPPVIGELKNLQL 421 (443)
Q Consensus 400 L~~n~~~~~~p~~~~~l~~L~~ 421 (443)
+++|+++ .++ .++++++|++
T Consensus 179 ls~N~i~-~i~-~l~~L~~L~~ 198 (199)
T d2omxa2 179 ISSNKVS-DIS-VLAKLTNLES 198 (199)
T ss_dssp CCSSCCC-CCG-GGGGCTTCSE
T ss_pred CCCCCCC-CCc-cccCCCCCCc
Confidence 4444444 222 2344444443
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.71 E-value=2.3e-16 Score=135.99 Aligned_cols=164 Identities=25% Similarity=0.385 Sum_probs=97.9
Q ss_pred CCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEE
Q 040495 241 SSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLN 320 (443)
Q Consensus 241 ~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 320 (443)
.+|++|++++|.++ .++ .+. .+++|++|++++|++++. + .++.+++|++|++++|++++. + .+..+++|+.|+
T Consensus 46 ~~L~~L~l~~~~i~-~l~-~l~-~l~~L~~L~L~~n~i~~l-~-~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 46 NSIDQIIANNSDIK-SVQ-GIQ-YLPNVTKLFLNGNKLTDI-K-PLANLKNLGWLFLDENKVKDL-S-SLKDLKKLKSLS 118 (210)
T ss_dssp HTCCEEECTTSCCC-CCT-TGG-GCTTCCEEECCSSCCCCC-G-GGTTCTTCCEEECCSSCCCCG-G-GGTTCTTCCEEE
T ss_pred cCccEEECcCCCCC-Cch-hHh-hCCCCCEEeCCCccccCc-c-ccccCcccccccccccccccc-c-cccccccccccc
Confidence 34455555555444 222 122 455566666666655532 2 245556666666666666532 2 355666666666
Q ss_pred ccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEeccCCcCeecCchhhhcCCCCCeEeC
Q 040495 321 MGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGRNRISGTIPPGIRSHANLNWLTM 400 (443)
Q Consensus 321 l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~L 400 (443)
+++|.+... ..+..+++++.+++++|.+++. ..+.. .++|+.+++++|++++ ++ .+..+++|++|++
T Consensus 119 l~~~~~~~~--------~~l~~l~~l~~l~~~~n~l~~~--~~~~~-l~~L~~l~l~~n~l~~-i~-~l~~l~~L~~L~L 185 (210)
T d1h6ta2 119 LEHNGISDI--------NGLVHLPQLESLYLGNNKITDI--TVLSR-LTKLDTLSLEDNQISD-IV-PLAGLTKLQNLYL 185 (210)
T ss_dssp CTTSCCCCC--------GGGGGCTTCCEEECCSSCCCCC--GGGGG-CTTCSEEECCSSCCCC-CG-GGTTCTTCCEEEC
T ss_pred ccccccccc--------cccccccccccccccccccccc--ccccc-cccccccccccccccc-cc-cccCCCCCCEEEC
Confidence 666655432 2356667777777777776632 22333 3677778888777774 33 3677788888888
Q ss_pred cCCcCcccCchhhcCCCCCCEEEccC
Q 040495 401 DSNLFTGTIPPVIGELKNLQLLDLGG 426 (443)
Q Consensus 401 ~~n~~~~~~p~~~~~l~~L~~L~l~~ 426 (443)
++|+++ .+| .+.++++|++|+|++
T Consensus 186 s~N~i~-~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 186 SKNHIS-DLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CSSCCC-BCG-GGTTCTTCSEEEEEE
T ss_pred CCCCCC-CCh-hhcCCCCCCEEEccC
Confidence 888876 455 477788888888764
No 22
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.69 E-value=2.3e-17 Score=140.28 Aligned_cols=172 Identities=16% Similarity=0.224 Sum_probs=140.2
Q ss_pred CcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccC-CccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEc
Q 040495 243 LEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSI-PVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNM 321 (443)
Q Consensus 243 L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~-~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 321 (443)
.++++.++++++ .+|..+. +++++|+|++|++++.+ +..|..+++|+.|++++|.+.+..+..+..+++|++|++
T Consensus 10 ~~~v~Cs~~~L~-~iP~~lp---~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 10 GTTVDCTGRGLK-EIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCEEEEeCCCcC-ccCCCCC---CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeee
Confidence 457899999998 8997653 68999999999998644 566789999999999999999999999999999999999
Q ss_pred cCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEeccCCcCeecCch-hhhcCCCCCeEeC
Q 040495 322 GINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGRNRISGTIPP-GIRSHANLNWLTM 400 (443)
Q Consensus 322 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~-~l~~~~~L~~L~L 400 (443)
++|+++...+ ..|.++++|++|+|++|++++..|..+.. .++|++++|++|.+...... ++. ..++.+.+
T Consensus 86 s~N~l~~l~~------~~F~~l~~L~~L~L~~N~l~~i~~~~f~~-l~~L~~l~L~~N~~~~~~~~~~~~--~~l~~~~l 156 (192)
T d1w8aa_ 86 GENKIKEISN------KMFLGLHQLKTLNLYDNQISCVMPGSFEH-LNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSL 156 (192)
T ss_dssp CSCCCCEECS------SSSTTCTTCCEEECCSSCCCEECTTSSTT-CTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCC
T ss_pred ccccccccCH------HHHhCCCcccccccCCccccccCHHHhcC-CcccccccccccccccccchHHHh--hhhhhhcc
Confidence 9999999887 67899999999999999999544555555 48999999999998854322 222 23556677
Q ss_pred cCCcCcccCchhhcCCCCCCEEEccCCcCc
Q 040495 401 DSNLFTGTIPPVIGELKNLQLLDLGGNFLQ 430 (443)
Q Consensus 401 ~~n~~~~~~p~~~~~l~~L~~L~l~~n~l~ 430 (443)
..+.+....|.. +..++.++++.|.+.
T Consensus 157 ~~~~~~c~~p~~---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 157 NGGAARCGAPSK---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp SGGGCBBCSSTT---TTTSBGGGSCTTTCC
T ss_pred cCCCeEeCCChh---hcCCEeeecCHhhCc
Confidence 778887777755 455678899999886
No 23
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=3.1e-16 Score=135.24 Aligned_cols=164 Identities=21% Similarity=0.314 Sum_probs=103.5
Q ss_pred CCCCEEEcccccCCCCCCccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEe
Q 040495 217 RNLRLLDIAFNHFSGMIPPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIE 296 (443)
Q Consensus 217 ~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~ 296 (443)
.++++|++++|.+... ..+..+++|++|++++|.++ .++. +. .+++|+.|++++|++++ ++ .+..+++|+.|+
T Consensus 46 ~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~L~~n~i~-~l~~-~~-~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~ 118 (210)
T d1h6ta2 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT-DIKP-LA-NLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (210)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCC-CCGG-GT-TCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCccEEECcCCCCCCc--hhHhhCCCCCEEeCCCcccc-Cccc-cc-cCccccccccccccccc-cc-cccccccccccc
Confidence 3455555555555432 12455666666666666665 3332 22 56667777777766663 33 356667777777
Q ss_pred cccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhhccCCCEEec
Q 040495 297 FSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAM 376 (443)
Q Consensus 297 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L 376 (443)
+++|.+.. ...+..+++++.+++++|.+++.. .+..+++|+++++++|++++ ++. +.. .++|+.|++
T Consensus 119 l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~~~--------~~~~l~~L~~l~l~~n~l~~-i~~-l~~-l~~L~~L~L 185 (210)
T d1h6ta2 119 LEHNGISD--INGLVHLPQLESLYLGNNKITDIT--------VLSRLTKLDTLSLEDNQISD-IVP-LAG-LTKLQNLYL 185 (210)
T ss_dssp CTTSCCCC--CGGGGGCTTCCEEECCSSCCCCCG--------GGGGCTTCSEEECCSSCCCC-CGG-GTT-CTTCCEEEC
T ss_pred cccccccc--cccccccccccccccccccccccc--------cccccccccccccccccccc-ccc-ccC-CCCCCEEEC
Confidence 77776653 234667777777777777766532 25567778888888888773 332 444 377888888
Q ss_pred cCCcCeecCchhhhcCCCCCeEeCcC
Q 040495 377 GRNRISGTIPPGIRSHANLNWLTMDS 402 (443)
Q Consensus 377 ~~n~l~~~~p~~l~~~~~L~~L~L~~ 402 (443)
++|+++ .+| .+..+++|++|+|++
T Consensus 186 s~N~i~-~l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 186 SKNHIS-DLR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CSSCCC-BCG-GGTTCTTCSEEEEEE
T ss_pred CCCCCC-CCh-hhcCCCCCCEEEccC
Confidence 888887 455 477888888888764
No 24
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.69 E-value=5.5e-16 Score=132.45 Aligned_cols=147 Identities=24% Similarity=0.347 Sum_probs=83.8
Q ss_pred CCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCC
Q 040495 265 LPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCS 344 (443)
Q Consensus 265 ~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~ 344 (443)
++++++|++++|+++. + ..+..+++|++|++++|++++..+ ++++++|++|++++|.+.... .+.+++
T Consensus 39 l~~l~~L~l~~~~i~~-l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~~~~--------~l~~l~ 106 (199)
T d2omxa2 39 LDQVTTLQADRLGIKS-I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT--------PLANLT 106 (199)
T ss_dssp HTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG--------GGTTCT
T ss_pred hcCCCEEECCCCCCCC-c-cccccCCCcCcCccccccccCccc--ccCCccccccccccccccccc--------cccccc
Confidence 4566666666666652 2 235556666666666666664332 556666666666666554432 255666
Q ss_pred CCCEEEccCCcCcccCChhHhhhccCCCEEeccCCcCeecCchhhhcCCCCCeEeCcCCcCcccCchhhcCCCCCCEEEc
Q 040495 345 KLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGRNRISGTIPPGIRSHANLNWLTMDSNLFTGTIPPVIGELKNLQLLDL 424 (443)
Q Consensus 345 ~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~l 424 (443)
+|+.|++++|.+.. ++ .+.. +++|+.+++++|++. .++ .+..+++|++|++++|.+++ ++ .+.++++|++|++
T Consensus 107 ~L~~L~l~~~~~~~-~~-~~~~-l~~L~~L~l~~n~l~-~~~-~l~~~~~L~~L~l~~n~l~~-l~-~l~~l~~L~~L~l 179 (199)
T d2omxa2 107 NLTGLTLFNNQITD-ID-PLKN-LTNLNRLELSSNTIS-DIS-ALSGLTSLQQLNFSSNQVTD-LK-PLANLTTLERLDI 179 (199)
T ss_dssp TCSEEECCSSCCCC-CG-GGTT-CTTCSEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCCEEEC
T ss_pred cccccccccccccc-cc-ccch-hhhhHHhhhhhhhhc-ccc-cccccccccccccccccccC-Cc-cccCCCCCCEEEC
Confidence 66666666666552 21 2333 256666666666665 232 35566666666666666653 32 2556666666666
Q ss_pred cCCcCc
Q 040495 425 GGNFLQ 430 (443)
Q Consensus 425 ~~n~l~ 430 (443)
++|+++
T Consensus 180 s~N~i~ 185 (199)
T d2omxa2 180 SSNKVS 185 (199)
T ss_dssp CSSCCC
T ss_pred CCCCCC
Confidence 666665
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67 E-value=8.5e-17 Score=145.55 Aligned_cols=256 Identities=17% Similarity=0.233 Sum_probs=160.9
Q ss_pred cEeeeeccccCccCCccccCCCCCCEEEccCCcCCcccccccCCCCCCEEEcccccCCCC-CCccccCCCCCcEEEcccC
Q 040495 173 ERLFIFHNHITGQLPASIGNLSSLLAFDVRENILWGRIDSLVQLRNLRLLDIAFNHFSGM-IPPPIFNISSLEVISLSEN 251 (443)
Q Consensus 173 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~l~~l~~L~~L~l~~n~~~~~-~~~~l~~l~~L~~L~l~~n 251 (443)
+.++++++.+.......+.. .....+.+................+|++|+++++.++.. +...+.++++|++|+++++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~ 81 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL 81 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTC
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeeccccccccchhhhccCCCCCEEECCCCccCHHHHHHHHHhCCCccccccccc
Confidence 36777777654222222211 234556665554444333344556888888888877643 2344567888888888888
Q ss_pred cCcccCChhhhcCCCCCcEEeCCCC-cCCcc-CCccCcCCCCCCEEecccC-cCccc-cchhhh-CCCCCCEEEccCC--
Q 040495 252 RFTGSLPVDAGVNLPNLRQLSPNGN-NFTGS-IPVSLSNASRLEMIEFSRN-QFSGR-VSVDFS-RLKNLSFLNMGIN-- 324 (443)
Q Consensus 252 ~l~~~~~~~~~~~~~~L~~L~L~~n-~l~~~-~~~~l~~~~~L~~L~l~~n-~l~~~-~~~~~~-~l~~L~~L~l~~n-- 324 (443)
.+++..+..+. .+++|++|+++++ .+++. +......+++|++|+++++ .+++. ....+. ..++|+.|++++.
T Consensus 82 ~l~~~~~~~l~-~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 160 (284)
T d2astb2 82 RLSDPIVNTLA-KNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 160 (284)
T ss_dssp BCCHHHHHHHT-TCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred CCCcHHHHHHh-cCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence 88766666665 6788888888885 55532 2233456788888888886 34432 222233 3567888888764
Q ss_pred CCcccCCCchhhHhhhcCCCCCCEEEccCC-cCcccCChhHhhhccCCCEEeccCC-cCeecCchhhhcCCCCCeEeCcC
Q 040495 325 NLGTRTANELDFINLLANCSKLERLYFNRN-RFQGVLPQSMANFSSTIKQIAMGRN-RISGTIPPGIRSHANLNWLTMDS 402 (443)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n-~l~~~~p~~~~~~~~~L~~L~L~~n-~l~~~~p~~l~~~~~L~~L~L~~ 402 (443)
.++.. .+.....++++|++|++++| .+++.....+..+ ++|++|++++| .+++.....++.+++|+.|++++
T Consensus 161 ~i~~~-----~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~-~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~ 234 (284)
T d2astb2 161 NLQKS-----DLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL-NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFG 234 (284)
T ss_dssp GSCHH-----HHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC-TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred ccccc-----cccccccccccccccccccccCCCchhhhhhccc-CcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeC
Confidence 23322 12234567888888888876 4676666667664 78888888885 57766666788888888888888
Q ss_pred CcCcccCchhhcCCCCCCEEEccCCcCcccCCccccC
Q 040495 403 NLFTGTIPPVIGELKNLQLLDLGGNFLQGSIPSSLGN 439 (443)
Q Consensus 403 n~~~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~ 439 (443)
+--.+.++.....+++|+ +..+++++..+..+++
T Consensus 235 ~~~d~~l~~l~~~lp~L~---i~~~~ls~~~~~~~~~ 268 (284)
T d2astb2 235 IVPDGTLQLLKEALPHLQ---INCSHFTTIARPTIGN 268 (284)
T ss_dssp SSCTTCHHHHHHHSTTSE---ESCCCSCCTTCSSCSS
T ss_pred CCCHHHHHHHHHhCcccc---ccCccCCCCCCCccCc
Confidence 733333333334455544 5667777655555443
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=7.9e-17 Score=145.76 Aligned_cols=254 Identities=16% Similarity=0.128 Sum_probs=166.2
Q ss_pred ceeeccCCcccccCCccccCCcCccEeeeeccccCccCCccccCCCCCCEEEccCCcCCccc--ccccCCCCCCEEEccc
Q 040495 149 IELSVDTNYLVGEIPSAIGSLFKLERLFIFHNHITGQLPASIGNLSSLLAFDVRENILWGRI--DSLVQLRNLRLLDIAF 226 (443)
Q Consensus 149 ~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~--~~l~~l~~L~~L~l~~ 226 (443)
+++|++++.+.......+.. .....+.++........ .......+|++|+++++.+.... ..+..+++|++|++++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~-~~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPL-AEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCC-CSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeeccccccccch-hhhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 46888887764322222111 23445555555544222 23345568999999988776544 5567889999999999
Q ss_pred ccCCCCCCccccCCCCCcEEEcccC-cCcccCChhhhcCCCCCcEEeCCCC-cCCcc-CCccCc-CCCCCCEEecccC--
Q 040495 227 NHFSGMIPPPIFNISSLEVISLSEN-RFTGSLPVDAGVNLPNLRQLSPNGN-NFTGS-IPVSLS-NASRLEMIEFSRN-- 300 (443)
Q Consensus 227 n~~~~~~~~~l~~l~~L~~L~l~~n-~l~~~~~~~~~~~~~~L~~L~L~~n-~l~~~-~~~~l~-~~~~L~~L~l~~n-- 300 (443)
+.+++..+..++.+++|++|+++++ .++..--..+...+++|++|+++++ .+++. +...+. .++.|+.|+++++
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~ 160 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK 160 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccc
Confidence 9887777777888899999999986 4553222233446889999999986 44432 222232 3578999999875
Q ss_pred cCccc-cchhhhCCCCCCEEEccCC-CCcccCCCchhhHhhhcCCCCCCEEEccCC-cCcccCChhHhhhccCCCEEecc
Q 040495 301 QFSGR-VSVDFSRLKNLSFLNMGIN-NLGTRTANELDFINLLANCSKLERLYFNRN-RFQGVLPQSMANFSSTIKQIAMG 377 (443)
Q Consensus 301 ~l~~~-~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n-~l~~~~p~~~~~~~~~L~~L~L~ 377 (443)
.++.. +......+++|++|+++++ .+++... ..+..+++|++|++++| .+++.....+.+ +++|+.|+++
T Consensus 161 ~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~------~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~-~~~L~~L~l~ 233 (284)
T d2astb2 161 NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCF------QEFFQLNYLQHLSLSRCYDIIPETLLELGE-IPTLKTLQVF 233 (284)
T ss_dssp GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGG------GGGGGCTTCCEEECTTCTTCCGGGGGGGGG-CTTCCEEECT
T ss_pred ccccccccccccccccccccccccccCCCchhh------hhhcccCcCCEEECCCCCCCChHHHHHHhc-CCCCCEEeee
Confidence 34433 2233467899999999886 4665544 55778899999999985 677666666666 4789999999
Q ss_pred CCcCeec-CchhhhcCCCCCeEeCcCCcCcccCchhhcC
Q 040495 378 RNRISGT-IPPGIRSHANLNWLTMDSNLFTGTIPPVIGE 415 (443)
Q Consensus 378 ~n~l~~~-~p~~l~~~~~L~~L~L~~n~~~~~~p~~~~~ 415 (443)
++ +++. ++.....+++|+ +..+.+++..+..+++
T Consensus 234 ~~-~~d~~l~~l~~~lp~L~---i~~~~ls~~~~~~~~~ 268 (284)
T d2astb2 234 GI-VPDGTLQLLKEALPHLQ---INCSHFTTIARPTIGN 268 (284)
T ss_dssp TS-SCTTCHHHHHHHSTTSE---ESCCCSCCTTCSSCSS
T ss_pred CC-CCHHHHHHHHHhCcccc---ccCccCCCCCCCccCc
Confidence 88 4433 333334566554 4666777555555544
No 27
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.58 E-value=4.2e-16 Score=145.19 Aligned_cols=45 Identities=18% Similarity=0.087 Sum_probs=25.8
Q ss_pred CChhhhcCCCCceeeccCCccccc----CCccccCCcCccEeeeecccc
Q 040495 138 IPTNLSRRSNLIELSVDTNYLVGE----IPSAIGSLFKLERLFIFHNHI 182 (443)
Q Consensus 138 ~p~~l~~l~~L~~L~l~~n~l~~~----~p~~l~~l~~L~~L~l~~n~l 182 (443)
+...+....+|++|++++|.+... +...+...++|+.++++++..
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~ 71 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFT 71 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCT
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcc
Confidence 344556667777777777766432 223344556666666665543
No 28
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.58 E-value=1.1e-15 Score=142.24 Aligned_cols=255 Identities=16% Similarity=0.187 Sum_probs=118.0
Q ss_pred CCccccCCcCccEeeeeccccCccC----CccccCCCCCCEEEccCCcCCccc-----------ccccCCCCCCEEEccc
Q 040495 162 IPSAIGSLFKLERLFIFHNHITGQL----PASIGNLSSLLAFDVRENILWGRI-----------DSLVQLRNLRLLDIAF 226 (443)
Q Consensus 162 ~p~~l~~l~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~l~~n~l~~~~-----------~~l~~l~~L~~L~l~~ 226 (443)
+...+.....+++|++++|.++... ...+...++|+.+++.++...... ..+...++|++|++++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 3344555677777777777665322 223445566667766655332111 2223345555555555
Q ss_pred ccCCCCC----CccccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcC
Q 040495 227 NHFSGMI----PPPIFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQF 302 (443)
Q Consensus 227 n~~~~~~----~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l 302 (443)
|.+.... ...+...++|++|++++|.+...-...+...+ .. -.........+.|+.+++++|.+
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l---~~---------~~~~~~~~~~~~L~~l~l~~n~i 170 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARAL---QE---------LAVNKKAKNAPPLRSIICGRNRL 170 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHH---HH---------HHHHHHHHTCCCCCEEECCSSCC
T ss_pred cccccccccchhhhhcccccchheecccccccccccccccccc---cc---------cccccccccCcccceeecccccc
Confidence 5544321 11222334455555554443211000000000 00 00000012334555555555555
Q ss_pred ccc----cchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCC----hhHhhhccCCCEE
Q 040495 303 SGR----VSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLP----QSMANFSSTIKQI 374 (443)
Q Consensus 303 ~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p----~~~~~~~~~L~~L 374 (443)
+.. +...+...+.|+.|++++|.++...... .....+..+++|+.|++++|.++.... ..+.. .++|++|
T Consensus 171 ~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~-~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~-~~~L~~L 248 (344)
T d2ca6a1 171 ENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH-LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS-WPNLREL 248 (344)
T ss_dssp TGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHH-HHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG-CTTCCEE
T ss_pred cccccccccchhhhhhhhccccccccccccccccc-chhhhhcchhhhcccccccccccccccccccccccc-cccchhh
Confidence 422 1222344556666666666554321100 011234556666666666666543221 12222 3566666
Q ss_pred eccCCcCeecCch----hhhc--CCCCCeEeCcCCcCccc----Cchhhc-CCCCCCEEEccCCcCc
Q 040495 375 AMGRNRISGTIPP----GIRS--HANLNWLTMDSNLFTGT----IPPVIG-ELKNLQLLDLGGNFLQ 430 (443)
Q Consensus 375 ~L~~n~l~~~~p~----~l~~--~~~L~~L~L~~n~~~~~----~p~~~~-~l~~L~~L~l~~n~l~ 430 (443)
++++|.+++.... .+.. .+.|++|++++|.++.. +.+.+. +.++|++|++++|++.
T Consensus 249 ~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~ 315 (344)
T d2ca6a1 249 GLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFS 315 (344)
T ss_dssp ECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSC
T ss_pred hhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCC
Confidence 6666666654222 2222 34577777777776532 233332 4566777777777765
No 29
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=9.5e-15 Score=119.82 Aligned_cols=125 Identities=16% Similarity=0.207 Sum_probs=74.8
Q ss_pred cCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhh
Q 040495 287 SNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMAN 366 (443)
Q Consensus 287 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~ 366 (443)
.++.++++|++++|+++.. +..+..+++|+.|++++|.++.... +..+++|++|++++|+++ .+|..++.
T Consensus 15 ~n~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l~~--------~~~l~~L~~L~ls~N~i~-~l~~~~~~ 84 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDG--------FPLLRRLKTLLVNNNRIC-RIGEGLDQ 84 (162)
T ss_dssp ECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEECC--------CCCCSSCCEEECCSSCCC-EECSCHHH
T ss_pred cCcCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCccCC--------cccCcchhhhhccccccc-CCCccccc
Confidence 3445555666666665533 3334455666666666666654422 556666777777777766 34443333
Q ss_pred hccCCCEEeccCCcCeecCc--hhhhcCCCCCeEeCcCCcCcccCc----hhhcCCCCCCEEE
Q 040495 367 FSSTIKQIAMGRNRISGTIP--PGIRSHANLNWLTMDSNLFTGTIP----PVIGELKNLQLLD 423 (443)
Q Consensus 367 ~~~~L~~L~L~~n~l~~~~p--~~l~~~~~L~~L~L~~n~~~~~~p----~~~~~l~~L~~L~ 423 (443)
.+++|+.|++++|+++. ++ ..+..+++|+++++++|+++ ..| ..+..+++|++||
T Consensus 85 ~l~~L~~L~L~~N~i~~-~~~l~~l~~l~~L~~L~l~~N~i~-~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 85 ALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp HCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred cccccccceeccccccc-cccccccccccccchhhcCCCccc-cccchHHHHHHHCCCcCeeC
Confidence 24677777777777663 22 35667777777777777776 333 2466677777776
No 30
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.52 E-value=3.8e-14 Score=110.56 Aligned_cols=100 Identities=20% Similarity=0.326 Sum_probs=45.7
Q ss_pred EEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeeccCCcccccCCccccCCcCccEeeeeccc
Q 040495 102 YINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVGEIPSAIGSLFKLERLFIFHNH 181 (443)
Q Consensus 102 ~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~l~~n~ 181 (443)
+|++++|+++ .++ .+.++++|++|++++|.++ .+|..+..+++|++|++++|.++ .+| .++.+++|+++++++|+
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCc
Confidence 4455555544 222 2444555555555555554 34444455555555555555544 222 24445555555555555
Q ss_pred cCccC-CccccCCCCCCEEEccCCcC
Q 040495 182 ITGQL-PASIGNLSSLLAFDVRENIL 206 (443)
Q Consensus 182 l~~~~-~~~l~~l~~L~~L~l~~n~l 206 (443)
++... ...+..+++|+++++++|.+
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcC
Confidence 44221 12334444444444444433
No 31
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48 E-value=1.3e-13 Score=112.99 Aligned_cols=112 Identities=17% Similarity=0.141 Sum_probs=68.3
Q ss_pred ccCCCCCcEEEcccCcCcccCChhhhcCCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCC
Q 040495 237 IFNISSLEVISLSENRFTGSLPVDAGVNLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNL 316 (443)
Q Consensus 237 l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 316 (443)
+.+..++++|++++|+++ .++. .+..+++|++|++++|+++ .++ .+..+++|++|++++|+++...+..+..+++|
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~-~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L 89 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 89 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred ccCcCcCcEEECCCCCCC-ccCc-cccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence 345556667777777666 4543 3335667777777777766 332 35666777777777777765555555566677
Q ss_pred CEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCc
Q 040495 317 SFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQ 357 (443)
Q Consensus 317 ~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 357 (443)
+.|++++|.+..... ...+..+++|++|++++|+++
T Consensus 90 ~~L~L~~N~i~~~~~-----l~~l~~l~~L~~L~l~~N~i~ 125 (162)
T d1a9na_ 90 TELILTNNSLVELGD-----LDPLASLKSLTYLCILRNPVT 125 (162)
T ss_dssp CEEECCSCCCCCGGG-----GGGGGGCTTCCEEECCSSGGG
T ss_pred ccceecccccccccc-----ccccccccccchhhcCCCccc
Confidence 777777766654321 123556666666666666665
No 32
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.48 E-value=3e-13 Score=105.34 Aligned_cols=86 Identities=23% Similarity=0.300 Sum_probs=38.2
Q ss_pred CCCCCcEEeCCCCcCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCC
Q 040495 264 NLPNLRQLSPNGNNFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANC 343 (443)
Q Consensus 264 ~~~~L~~L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~ 343 (443)
.+++|++|++++|.++ .+|..+..+++|++|++++|++++. + .+..+++|+.+++++|.++..... ..+..+
T Consensus 18 ~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~-----~~l~~~ 89 (124)
T d1dcea3 18 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAI-----QPLVSC 89 (124)
T ss_dssp GGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTT-----GGGGGC
T ss_pred cCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-C-ccccccccCeEECCCCccCCCCCc-----hhhcCC
Confidence 3444444444444444 3333444444444444444444432 2 244444455555544444433210 224444
Q ss_pred CCCCEEEccCCcCc
Q 040495 344 SKLERLYFNRNRFQ 357 (443)
Q Consensus 344 ~~L~~L~l~~n~l~ 357 (443)
++|++|++++|+++
T Consensus 90 ~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 90 PRLVLLNLQGNSLC 103 (124)
T ss_dssp TTCCEEECTTSGGG
T ss_pred CCCCEEECCCCcCC
Confidence 55555555555444
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.32 E-value=1.1e-13 Score=117.40 Aligned_cols=146 Identities=21% Similarity=0.294 Sum_probs=107.8
Q ss_pred CCCCcEEeCCCC--cCCccCCccCcCCCCCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcC
Q 040495 265 LPNLRQLSPNGN--NFTGSIPVSLSNASRLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLAN 342 (443)
Q Consensus 265 ~~~L~~L~L~~n--~l~~~~~~~l~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~ 342 (443)
....+.+++.+. .+. .+|..+..+++|++|++++|+++.. + .+..+++|+.|++++|.++.... ....
T Consensus 22 ~~~~~~~~l~~~~~~i~-~l~~sl~~L~~L~~L~Ls~n~I~~i-~-~l~~l~~L~~L~Ls~N~i~~i~~-------~~~~ 91 (198)
T d1m9la_ 22 ATEAEKVELHGMIPPIE-KMDATLSTLKACKHLALSTNNIEKI-S-SLSGMENLRILSLGRNLIKKIEN-------LDAV 91 (198)
T ss_dssp CTTCSCEECCBCCTTCC-CCHHHHHHTTTCCEEECSEEEESCC-C-CHHHHTTCCEEECCEEEECSCSS-------HHHH
T ss_pred ccccceeeeecccCchh-hhhhHHhcccccceeECcccCCCCc-c-cccCCccccChhhcccccccccc-------cccc
Confidence 344566666654 233 5567788899999999999998854 3 48889999999999998876432 2334
Q ss_pred CCCCCEEEccCCcCcccCChhHhhhccCCCEEeccCCcCeecCc-hhhhcCCCCCeEeCcCCcCcccCch----------
Q 040495 343 CSKLERLYFNRNRFQGVLPQSMANFSSTIKQIAMGRNRISGTIP-PGIRSHANLNWLTMDSNLFTGTIPP---------- 411 (443)
Q Consensus 343 ~~~L~~L~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l~~~~p-~~l~~~~~L~~L~L~~n~~~~~~p~---------- 411 (443)
+++|++|++++|+++ .++ .+..+ ++|+.|++++|++++.-. ..+..+++|++|++++|++....+.
T Consensus 92 ~~~L~~L~l~~N~i~-~l~-~~~~l-~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~ 168 (198)
T d1m9la_ 92 ADTLEELWISYNQIA-SLS-GIEKL-VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHCCEEECSEEECC-CHH-HHHHH-HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHH
T ss_pred ccccccccccccccc-ccc-ccccc-ccccccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHH
Confidence 467999999999998 343 35553 789999999999984321 4678899999999999988744332
Q ss_pred hhcCCCCCCEEE
Q 040495 412 VIGELKNLQLLD 423 (443)
Q Consensus 412 ~~~~l~~L~~L~ 423 (443)
.+..+++|+.||
T Consensus 169 vi~~lp~L~~LD 180 (198)
T d1m9la_ 169 VVKRLPNLKKLD 180 (198)
T ss_dssp HHHHCSSCCEES
T ss_pred HHHHCCCcCEeC
Confidence 256788999987
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.29 E-value=5.2e-14 Score=119.50 Aligned_cols=87 Identities=24% Similarity=0.303 Sum_probs=40.0
Q ss_pred ccccCCCCCCEEeCCCCcCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeeccCCcccccCCccccCCcC
Q 040495 92 PYVGNLSFLRYINLANNGFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVGEIPSAIGSLFK 171 (443)
Q Consensus 92 ~~~~~l~~L~~L~L~~n~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 171 (443)
..+..+++|++|++++|.++ .++ .+.++++|++|++++|.++ .+|.....+++|++|++++|+++. + +.+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l-~~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-L-SGIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-H-HHHHHHHH
T ss_pred hHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-c-cccccccc
Confidence 34445555555555555554 222 2445555555555555544 333333333445555555554442 1 12334444
Q ss_pred ccEeeeeccccC
Q 040495 172 LERLFIFHNHIT 183 (443)
Q Consensus 172 L~~L~l~~n~l~ 183 (443)
|++|++++|.++
T Consensus 117 L~~L~L~~N~i~ 128 (198)
T d1m9la_ 117 LRVLYMSNNKIT 128 (198)
T ss_dssp SSEEEESEEECC
T ss_pred ccccccccchhc
Confidence 444444444444
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=2.1e-11 Score=98.80 Aligned_cols=102 Identities=15% Similarity=0.144 Sum_probs=46.5
Q ss_pred EeCCCCcCCccCCccCcCCCCCCEEecccC-cCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEE
Q 040495 271 LSPNGNNFTGSIPVSLSNASRLEMIEFSRN-QFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERL 349 (443)
Q Consensus 271 L~L~~n~l~~~~~~~l~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L 349 (443)
++..++++. ..|..+..+++|++|++++| .++...+..|..+++|+.|++++|+++...+ .+|..+++|++|
T Consensus 13 l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~------~~f~~l~~L~~L 85 (156)
T d2ifga3 13 LRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAP------DAFHFTPRLSRL 85 (156)
T ss_dssp EECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECT------TGGGSCSCCCEE
T ss_pred EEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccc------ccccccccccce
Confidence 444444433 23334444444555555433 2444334444445555555555555544444 344445555555
Q ss_pred EccCCcCcccCChhHhhhccCCCEEeccCCcC
Q 040495 350 YFNRNRFQGVLPQSMANFSSTIKQIAMGRNRI 381 (443)
Q Consensus 350 ~l~~n~l~~~~p~~~~~~~~~L~~L~L~~n~l 381 (443)
+|++|+++ .+|...+.. ..++.|+|++|++
T Consensus 86 ~Ls~N~l~-~l~~~~~~~-~~l~~L~L~~Np~ 115 (156)
T d2ifga3 86 NLSFNALE-SLSWKTVQG-LSLQELVLSGNPL 115 (156)
T ss_dssp ECCSSCCS-CCCSTTTCS-CCCCEEECCSSCC
T ss_pred eccCCCCc-ccChhhhcc-ccccccccCCCcc
Confidence 55555554 344333332 2355555555544
No 36
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.22 E-value=2.3e-11 Score=98.59 Aligned_cols=93 Identities=14% Similarity=0.094 Sum_probs=59.6
Q ss_pred ccccccCCCCCCEEeCCCC-cCCCCCchhhcCCCccCeEEccCCCCCCCCChhhhcCCCCceeeccCCcccccCCccccC
Q 040495 90 LSPYVGNLSFLRYINLANN-GFLGEIPPQIGRLNMLEGLVLSNNSFSGTIPTNLSRRSNLIELSVDTNYLVGEIPSAIGS 168 (443)
Q Consensus 90 ~~~~~~~l~~L~~L~L~~n-~~~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~l~~n~l~~~~p~~l~~ 168 (443)
.|..+..+++|++|++++| .++...+.+|.++++|+.|++++|.++...|..|..+++|++|++++|+++ .+|.....
T Consensus 23 ~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~ 101 (156)
T d2ifga3 23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQ 101 (156)
T ss_dssp TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTC
T ss_pred CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhc
Confidence 3455666777777777655 365444556777777777777777777555666777777777777777776 44443333
Q ss_pred CcCccEeeeeccccC
Q 040495 169 LFKLERLFIFHNHIT 183 (443)
Q Consensus 169 l~~L~~L~l~~n~l~ 183 (443)
..+|+.|++++|.+.
T Consensus 102 ~~~l~~L~L~~Np~~ 116 (156)
T d2ifga3 102 GLSLQELVLSGNPLH 116 (156)
T ss_dssp SCCCCEEECCSSCCC
T ss_pred cccccccccCCCccc
Confidence 345666666666553
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.34 E-value=5.1e-08 Score=78.86 Aligned_cols=81 Identities=19% Similarity=0.221 Sum_probs=36.0
Q ss_pred CCCCCCEEEccCCcCcccC--ChhHhhhccCCCEEeccCCcCeecCchhhhcCCCCCeEeCcCCcCcccCc-------hh
Q 040495 342 NCSKLERLYFNRNRFQGVL--PQSMANFSSTIKQIAMGRNRISGTIPPGIRSHANLNWLTMDSNLFTGTIP-------PV 412 (443)
Q Consensus 342 ~~~~L~~L~l~~n~l~~~~--p~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~L~~n~~~~~~p-------~~ 412 (443)
.+++|++|++++|+++..- +..+.. +++|+.|++++|.++..-+.......+|+.+++++|++..... ..
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~-l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i 141 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQK-APNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAI 141 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHH-STTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHH
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhh-CCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHH
Confidence 3444444555555444211 111222 3455555555555553222122233345556666665553322 22
Q ss_pred hcCCCCCCEEE
Q 040495 413 IGELKNLQLLD 423 (443)
Q Consensus 413 ~~~l~~L~~L~ 423 (443)
+..+|+|+.||
T Consensus 142 ~~~~P~L~~LD 152 (162)
T d1koha1 142 RERFPKLLRLD 152 (162)
T ss_dssp HTTSTTCCEET
T ss_pred HHHCCCCCEEC
Confidence 44566666664
No 38
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.26 E-value=5.4e-07 Score=73.03 Aligned_cols=91 Identities=9% Similarity=0.091 Sum_probs=48.5
Q ss_pred hhhcCCCCCCEEEccCCcCcccCChhHhh---hccCCCEEeccCCcCeec----CchhhhcCCCCCeEeCcCCcCcc---
Q 040495 338 NLLANCSKLERLYFNRNRFQGVLPQSMAN---FSSTIKQIAMGRNRISGT----IPPGIRSHANLNWLTMDSNLFTG--- 407 (443)
Q Consensus 338 ~~~~~~~~L~~L~l~~n~l~~~~p~~~~~---~~~~L~~L~L~~n~l~~~----~p~~l~~~~~L~~L~L~~n~~~~--- 407 (443)
..+...++|++|++++|.++......+.. ..+.|+.|++++|.+++. +-..+...++|++|++++|.+..
T Consensus 38 ~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~ 117 (167)
T d1pgva_ 38 EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGN 117 (167)
T ss_dssp HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCH
T ss_pred HHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccH
Confidence 34555555666666666555322221211 135566666666666543 22344556667777777664331
Q ss_pred ----cCchhhcCCCCCCEEEccCCc
Q 040495 408 ----TIPPVIGELKNLQLLDLGGNF 428 (443)
Q Consensus 408 ----~~p~~~~~l~~L~~L~l~~n~ 428 (443)
.+.+.+...++|+.|+++.+.
T Consensus 118 ~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 118 QVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHHHHHhCCCccEeeCcCCC
Confidence 134445556777777776654
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.15 E-value=1.7e-06 Score=70.05 Aligned_cols=90 Identities=12% Similarity=0.142 Sum_probs=37.8
Q ss_pred CCCCCcEEeCCCC-cCCcc----CCccCcCCCCCCEEecccCcCccccch----hhhCCCCCCEEEccCCCCcccCCCch
Q 040495 264 NLPNLRQLSPNGN-NFTGS----IPVSLSNASRLEMIEFSRNQFSGRVSV----DFSRLKNLSFLNMGINNLGTRTANEL 334 (443)
Q Consensus 264 ~~~~L~~L~L~~n-~l~~~----~~~~l~~~~~L~~L~l~~n~l~~~~~~----~~~~l~~L~~L~l~~n~l~~~~~~~~ 334 (443)
+.+.|++|+++++ .++.. +-..+...+.|++|++++|.+...... .+...+.|+.|++++|.++.....
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~-- 90 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA-- 90 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH--
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHH--
Confidence 3455666666543 34321 122334445555555555555432111 223334444444444444432211
Q ss_pred hhHhhhcCCCCCCEEEccCCc
Q 040495 335 DFINLLANCSKLERLYFNRNR 355 (443)
Q Consensus 335 ~~~~~~~~~~~L~~L~l~~n~ 355 (443)
.+..++...++|++|++++|.
T Consensus 91 ~l~~aL~~n~sL~~L~l~~n~ 111 (167)
T d1pgva_ 91 RLLRSTLVTQSIVEFKADNQR 111 (167)
T ss_dssp HHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHhCCcCCEEECCCCc
Confidence 111334444444444444443
No 40
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.14 E-value=8.5e-07 Score=71.44 Aligned_cols=106 Identities=12% Similarity=0.099 Sum_probs=71.4
Q ss_pred CCCEEecccCcCccccchhhhCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCCh-hHhhhcc
Q 040495 291 RLEMIEFSRNQFSGRVSVDFSRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQ-SMANFSS 369 (443)
Q Consensus 291 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~-~~~~~~~ 369 (443)
.+..++...+.. ..++..+..++.|++|++++|+++...+. ...+..+++|+.|++++|.++ .+++ .... ..
T Consensus 43 ~~~~l~~~~~~~-~~l~~~~~~~~~L~~L~Ls~N~i~~l~~~----~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~-~~ 115 (162)
T d1koha1 43 IDVVLNRRSSMA-ATLRIIEENIPELLSLNLSNNRLYRLDDM----SSIVQKAPNLKILNLSGNELK-SERELDKIK-GL 115 (162)
T ss_dssp CCCCTTSHHHHH-HHHHHHHHHCTTCCCCCCCSSCCCCCSGG----GTHHHHSTTCCCCCCTTSCCC-CGGGHHHHT-TC
T ss_pred chhhcchhhhHh-hhhHHHHHhCCCCCEeeCCCccccCCchh----HHHHhhCCcccccccccCccc-cchhhhhhh-cc
Confidence 333444433322 23344456789999999999999876431 144677899999999999998 4444 3333 35
Q ss_pred CCCEEeccCCcCeecCc-------hhhhcCCCCCeEeCcCCcC
Q 040495 370 TIKQIAMGRNRISGTIP-------PGIRSHANLNWLTMDSNLF 405 (443)
Q Consensus 370 ~L~~L~L~~n~l~~~~p-------~~l~~~~~L~~L~L~~n~~ 405 (443)
.++.+++++|++++... ..+..+++|+.|| |..+
T Consensus 116 ~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD--g~~v 156 (162)
T d1koha1 116 KLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD--GHEL 156 (162)
T ss_dssp CCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET--TEEC
T ss_pred ccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC--cCCC
Confidence 68999999999986543 2356789999875 4444
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.93 E-value=3.4e-06 Score=68.11 Aligned_cols=92 Identities=16% Similarity=0.204 Sum_probs=44.9
Q ss_pred hhhcCCCCCCEEEccCCcCcccCChhHhh---hccCCCEEeccCCcCeec----CchhhhcCCCCCeEeC--cCCcCcc-
Q 040495 338 NLLANCSKLERLYFNRNRFQGVLPQSMAN---FSSTIKQIAMGRNRISGT----IPPGIRSHANLNWLTM--DSNLFTG- 407 (443)
Q Consensus 338 ~~~~~~~~L~~L~l~~n~l~~~~p~~~~~---~~~~L~~L~L~~n~l~~~----~p~~l~~~~~L~~L~L--~~n~~~~- 407 (443)
..+..+++|++|++++|.++...-..+.. ..+.++.+++++|.+.+. +...+...++|+.++| ++|.+..
T Consensus 40 ~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~ 119 (166)
T d1io0a_ 40 EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNN 119 (166)
T ss_dssp HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHH
Confidence 33445555555555555554322222211 124555666665555433 2234455566665444 3445542
Q ss_pred ---cCchhhcCCCCCCEEEccCCcC
Q 040495 408 ---TIPPVIGELKNLQLLDLGGNFL 429 (443)
Q Consensus 408 ---~~p~~~~~l~~L~~L~l~~n~l 429 (443)
.+.+.+...+.|+.|+++.+..
T Consensus 120 ~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 120 VEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 2334445566677777665543
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=97.72 E-value=1.5e-05 Score=64.09 Aligned_cols=94 Identities=9% Similarity=0.055 Sum_probs=48.4
Q ss_pred hCCCCCCEEEccCCCCcccCCCchhhHhhhcCCCCCCEEEccCCcCcccCChhHhhh---ccCCCEEec--cCCcCeec-
Q 040495 311 SRLKNLSFLNMGINNLGTRTANELDFINLLANCSKLERLYFNRNRFQGVLPQSMANF---SSTIKQIAM--GRNRISGT- 384 (443)
Q Consensus 311 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~---~~~L~~L~L--~~n~l~~~- 384 (443)
...++|+.|++++|.++...... +...+...++++.+++++|.+.+..-..+... .++++.++| ++|.+...
T Consensus 43 ~~n~~L~~L~Ls~n~l~~~~~~~--L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~ 120 (166)
T d1io0a_ 43 KTNTYVKKFSIVGTRSNDPVAFA--LAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 120 (166)
T ss_dssp TTCCSCCEEECTTSCCCHHHHHH--HHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred hcCCccCeeeccCCcccHHHHHH--HHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHH
Confidence 34555555555555554432211 11344555666666666666653322222211 245555443 44555442
Q ss_pred ---CchhhhcCCCCCeEeCcCCcCc
Q 040495 385 ---IPPGIRSHANLNWLTMDSNLFT 406 (443)
Q Consensus 385 ---~p~~l~~~~~L~~L~L~~n~~~ 406 (443)
+...+...++|+.|+++.+...
T Consensus 121 ~~~La~~L~~n~~L~~L~l~~~~~~ 145 (166)
T d1io0a_ 121 EMEIANMLEKNTTLLKFGYHFTQQG 145 (166)
T ss_dssp HHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCcCEEeCcCCCCc
Confidence 3345567778888888776543
Done!