BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040499
(133 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV-GVRNNTASGVTHTSSTEMYFPDW 63
RGT+ +IAPE + G S K+DV+G+G+ +LEL+ G R + + + ++ DW
Sbjct: 204 RGTIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQRAFDLARLA--NDDDVMLLDW 259
Query: 64 FYKLLEPGE-----DLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118
LL+ + D+ G +EE V ++I V L C Q++P +R MS+ V MLEG
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEE---VEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 13/120 (10%)
Query: 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV-GVRNNTASGVTHTSSTEMYFPDW 63
RG + +IAPE + G S K+DV+G+G+ +LEL+ G R + + + ++ DW
Sbjct: 196 RGXIGHIAPEYL--STGKSSEKTDVFGYGVMLLELITGQRAFDLARLA--NDDDVMLLDW 251
Query: 64 FYKLLEPGE-----DLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118
LL+ + D+ G +EE V ++I V L C Q++P +R MS+ V MLEG
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEE---VEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMY-FPDW 63
+GT+ YI PE F + G ++ KSDVY FG+ + E++ R S + + EM +W
Sbjct: 202 KGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCAR----SAIVQSLPREMVNLAEW 255
Query: 64 FYKLLEPG--EDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120
+ G E + L + +RK + C+ + DR SM + LE L
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 9/119 (7%)
Query: 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMY-FPDW 63
+GT+ YI PE F + G ++ KSDVY FG+ + E++ R S + + EM +W
Sbjct: 202 KGTLGYIDPEYFIK--GRLTEKSDVYSFGVVLFEVLCAR----SAIVQSLPREMVNLAEW 255
Query: 64 FYKLLEPG--EDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120
+ G E + L + +RK + C+ + DR SM + LE L
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPD 62
+A+ + ++A E +FG +H+SDV+ +G+TV EL+ +G+ PD
Sbjct: 194 EAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-----VPD 246
Query: 63 WFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTN 102
LLE GE L + + T I M++V+ W I N
Sbjct: 247 ----LLEKGERLAQPQICT-----IDVYMVMVKCWMIDEN 277
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPD 62
+A+ + ++A E +FG +H+SDV+ +G+TV EL+ +G+ PD
Sbjct: 176 EAKTPIKWMALESI--HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-----VPD 228
Query: 63 WFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTN 102
LLE GE L + + T I M++V+ W I N
Sbjct: 229 ----LLEKGERLAQPQICT-----IDVYMVMVKCWMIDEN 259
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ P
Sbjct: 170 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID---------PSQ 218
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 219 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ P
Sbjct: 170 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID---------PSQ 218
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 219 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ P
Sbjct: 170 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGID---------PSQ 218
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 219 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 265
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT +Y+APE G I+ KSD+Y FG+ +LE++
Sbjct: 197 GTTAYMAPEAL---RGEITPKSDIYSFGVVLLEII 228
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT +Y+APE G I+ KSD+Y FG+ +LE++
Sbjct: 197 GTTAYMAPEAL---RGEITPKSDIYSFGVVLLEII 228
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT +Y+APE G I+ KSD+Y FG+ +LE++
Sbjct: 191 GTTAYMAPEAL---RGEITPKSDIYSFGVVLLEII 222
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 225
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 176 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 224
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 225 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 271
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 225
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 225
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 220
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 220
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 17 CRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR 76
C ++ +H+SDV+ +G+T+ EL+ T G + PD LLE GE L +
Sbjct: 190 CIHYRKFTHQSDVWSYGVTIWELM-----TFGGKPYDGIPTREIPD----LLEKGERLPQ 240
Query: 77 HGLVTEEEEVIVRKMIIVRLWCIQTN 102
+ T I M++V+ W I +
Sbjct: 241 PPICT-----IDVYMVMVKCWMIDAD 261
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 173 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 221
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 222 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 268
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 173 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 221
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 222 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 268
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 174 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 222
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 223 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 220
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 14/86 (16%)
Query: 17 CRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR 76
C ++ +H+SDV+ +G+T+ EL+ T G + PD LLE GE L +
Sbjct: 213 CIHYRKFTHQSDVWSYGVTIWELM-----TFGGKPYDGIPTREIPD----LLEKGERLPQ 263
Query: 77 HGLVTEEEEVIVRKMIIVRLWCIQTN 102
+ T I M++V+ W I +
Sbjct: 264 PPICT-----IDVYMVMVKCWMIDAD 284
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 185 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 233
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 234 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 280
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 220
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 225
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 174 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 222
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 223 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT +Y APE G I+ KSD+Y FG+ +LE++
Sbjct: 188 GTTAYXAPEAL---RGEITPKSDIYSFGVVLLEII 219
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 177 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 225
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 272
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 220
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 211 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 260
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 261 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 307
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 252 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 301
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 302 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 348
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 172 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 220
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 174 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 222
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 223 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 269
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 211 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 260
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 261 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 307
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 196 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 245
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 246 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 292
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 211 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 260
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 261 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 307
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 211 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 260
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 261 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 307
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 204 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 253
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 254 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 300
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 200 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 249
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 250 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 296
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 205 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 254
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 255 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 301
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + GV
Sbjct: 203 NGRLPVKWMAPEALFDRIY---THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 252
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 253 --LFKLLKEGHRMDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 299
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 207 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 256
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 257 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 303
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 218 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 267
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 268 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 314
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 210 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 259
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 260 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 306
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
A+ + + APE NFG + KSDV+ FG+ ++E+V
Sbjct: 172 AKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIV 206
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 3 DARGTVSYIAPE-VFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+ R V ++APE +F R + +H+SDV+ FG+ + E+ + + G+
Sbjct: 264 NGRLPVKWMAPEALFDRVY---THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------- 313
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
+KLL+ G + + T E +++R C PS R + + VE L+
Sbjct: 314 --LFKLLKEGHRMDKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLD 360
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 379 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 427
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 428 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 474
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
A+ + + APE NFG + KSDV+ FG+ ++E+V
Sbjct: 329 AKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIV 363
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 376 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 424
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 425 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 471
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 418 AKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 466
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y+LLE ++R E+ ++R C Q NPSDR S ++ + E
Sbjct: 467 VYELLEKDYRMERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFE 513
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 12/88 (13%)
Query: 3 DARGTVSYIAPEVFCRNFGGI-SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFP 61
+AR V ++APE F GI + KSDV+ +G+ + E+ + N G+ ++
Sbjct: 233 NARLPVKWMAPESL---FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN------ 283
Query: 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVR 89
FYKL++ G + + TEE +I++
Sbjct: 284 --FYKLIQNGFKMDQPFYATEEIYIIMQ 309
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
A+ + + APE NFG + KSDV+ FG+ ++E+V
Sbjct: 345 AKFPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIV 379
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 33.1 bits (74), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 179 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 231
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123
LE G + R EE ++R C + P DR + +LE A
Sbjct: 232 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 280
Query: 124 --QVPPKP 129
Q P+P
Sbjct: 281 EGQFQPQP 288
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 170 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 222
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123
LE G + R EE ++R C + P DR + +LE A
Sbjct: 223 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 271
Query: 124 --QVPPKP 129
Q P+P
Sbjct: 272 EGQYQPQP 279
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 176 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 228
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123
LE G + R EE ++R C + P DR + +LE A
Sbjct: 229 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 277
Query: 124 --QVPPKP 129
Q P+P
Sbjct: 278 EGQYQPQP 285
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 180 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 232
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123
LE G + R EE ++R C + P DR + +LE A
Sbjct: 233 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 281
Query: 124 --QVPPKP 129
Q P+P
Sbjct: 282 EGQYQPQP 289
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 170 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 222
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123
LE G + R EE ++R C + P DR + +LE A
Sbjct: 223 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 271
Query: 124 --QVPPKP 129
Q P+P
Sbjct: 272 EGQYQPQP 279
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 10 YIAPEVFCRNFGGISHKSDVYGFGMTVLELVG 41
+++PEV +N G KSD+Y G+T EL
Sbjct: 185 WLSPEVLQQNLQGYDAKSDIYSVGITACELAN 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 20/128 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 178 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 230
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123
LE G + R EE ++R C + P DR + +LE A
Sbjct: 231 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 279
Query: 124 --QVPPKP 129
Q P+P
Sbjct: 280 EGQYQPQP 287
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 32.7 bits (73), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 10 YIAPEVFCRNFGGISHKSDVYGFGMTVLELVG 41
+++PEV +N G KSD+Y G+T EL
Sbjct: 201 WLSPEVLQQNLQGYDAKSDIYSVGITACELAN 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GTV Y+APEV R G SH +D + +G+ + E++
Sbjct: 192 GTVEYMAPEVVNRQ--GHSHSADWWSYGVLMFEML 224
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 18/120 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ V +IA E + KSDV+ FG+T+ E+ GV + EMY
Sbjct: 209 AKMPVKWIAIESLADRV--YTSKSDVWAFGVTMWEIATRGMTPYPGV---QNHEMY---- 259
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123
D HG ++ E + ++ + C +T+P DR + S LE LE+L
Sbjct: 260 ---------DYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 14/78 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ G+ PD LLE GE L + + T
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYDGIPARE-----IPD----LLEKGERLPQPPICT-- 247
Query: 84 EEVIVRKMIIVRLWCIQT 101
I MI+V+ W I +
Sbjct: 248 ---IDVYMIMVKCWMIDS 262
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 24/133 (18%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYF 60
M + +G+ +++APEVF S K DV+ +G+ + E++ R E+
Sbjct: 161 MTNNKGSAAWMAPEVF--EGSNYSEKCDVFSWGIILWEVITRRK---------PFDEIGG 209
Query: 61 PDWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEML---- 116
P ++++ + R L+ + I + ++ R W +PS R SM + V+++
Sbjct: 210 PA--FRIMWAVHNGTRPPLIKNLPKPI--ESLMTRCW--SKDPSQRPSMEEIVKIMTHLM 263
Query: 117 ---EGGLEALQVP 126
G E LQ P
Sbjct: 264 RYFPGADEPLQYP 276
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 24/133 (18%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYF 60
M + +G+ +++APEVF S K DV+ +G+ + E++ R E+
Sbjct: 160 MTNNKGSAAWMAPEVF--EGSNYSEKCDVFSWGIILWEVITRRK---------PFDEIGG 208
Query: 61 PDWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEML---- 116
P ++++ + R L+ + I + ++ R W +PS R SM + V+++
Sbjct: 209 PA--FRIMWAVHNGTRPPLIKNLPKPI--ESLMTRCW--SKDPSQRPSMEEIVKIMTHLM 262
Query: 117 ---EGGLEALQVP 126
G E LQ P
Sbjct: 263 RYFPGADEPLQYP 275
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
A+ + + APE NFG + KSDV+ FG+ + E+V
Sbjct: 171 AKFPIKWTAPEAI--NFGCFTIKSDVWSFGILLYEIV 205
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 249
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 250 ---IDVYMIMVKCWMIDAD 265
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 222 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 270
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 271 ---IDVYMIMVKCWMIDAD 286
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 246
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 247 ---IDVYMIMVKCWMIDAD 262
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 245
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 246 ---IDVYMIMVKCWMIDAD 261
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 249
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 250 ---IDVYMIMVKCWMIDAD 265
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 247
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 248 ---IDVYMIMVKCWMIDAD 263
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 248
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 249 ---IDVYMIMVKCWMIDAD 264
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 245
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 246 ---IDVYMIMVKCWMIDAD 261
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 246
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 247 ---IDVYMIMVKCWMIDAD 262
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 245
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 246 ---IDVYMIMVKCWMIDAD 261
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 247
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 248 ---IDVYMIMVKCWMIDAD 263
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 245
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 246 ---IDVYMIMVKCWMIDAD 261
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 252
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 253 ---IDVYMIMVKCWMIDAD 268
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 248
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 249 ---IDVYMIMVKCWMIDAD 264
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------SILEKGERLPQPPICT-- 242
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 243 ---IDVYMIMVKCWMIDAD 258
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 248
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 249 ---IDVYMIMVKCWMIDAD 264
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 247
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 248 ---IDVYMIMVKCWMIDAD 263
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 245
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 246 ---IDVYMIMVKCWMIDAD 261
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 252
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 253 ---IDVYMIMVKCWMIDAD 268
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 203 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 251
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 252 ---IDVYMIMVKCWMIDAD 267
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 191 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 239
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 240 ---IDVYMIMVKCWMIDAD 255
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 252
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 253 ---IDVYMIMVKCWMIDAD 268
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 231 THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS---------SILEKGERLPQPPICT-- 279
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 280 ---IDVYMIMVKCWMIDAD 295
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 14/79 (17%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICT-- 252
Query: 84 EEVIVRKMIIVRLWCIQTN 102
I MI+V+ W I +
Sbjct: 253 ---IDVYMIMVKCWMIDAD 268
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 18/121 (14%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 175 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 227
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123
LE G + R EE ++R C + P DR + +LE A
Sbjct: 228 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTAT 276
Query: 124 Q 124
+
Sbjct: 277 E 277
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 172 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 224
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122
LE G + R EE ++R C + P DR + +LE A
Sbjct: 225 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT+ Y+APE+ + G +D++ G T++E+
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMA 219
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 176 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 228
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122
LE G + R EE ++R C + P DR + +LE A
Sbjct: 229 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 170 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 222
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122
LE G + R EE ++R C + P DR + +LE A
Sbjct: 223 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 171 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 223
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122
LE G + R EE ++R C + P DR + +LE A
Sbjct: 224 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 170 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 222
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122
LE G + R EE ++R C + P DR + +LE A
Sbjct: 223 ----LERGYRMVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT+ Y+APE+ + G +D++ G T++E+
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMA 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPD 62
D V + APE C + SDV+ FG+T+ EL+ ++ S HT TE+
Sbjct: 173 DGDSPVFWYAPE--CLKECKFYYASDVWSFGVTLYELLTYCDSNQS--PHTKFTELIGHT 228
Query: 63 W-------FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115
+LLE GE L R E +++ C +T S R + V +
Sbjct: 229 QGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKN-------CWETEASFRPTFQNLVPI 281
Query: 116 LEGGLEALQ 124
L+ E Q
Sbjct: 282 LQTAQEKYQ 290
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT ++APEV G K+D++ FG+T +EL
Sbjct: 188 GTPCWMAPEVM-EQVRGYDFKADIWSFGITAIELA 221
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPD 62
D V + APE C + SDV+ FG+T+ EL+ ++ S HT TE+
Sbjct: 174 DGDSPVFWYAPE--CLKECKFYYASDVWSFGVTLYELLTYCDSNQS--PHTKFTELIGHT 229
Query: 63 W-------FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115
+LLE GE L R E +++ C +T S R + V +
Sbjct: 230 QGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKN-------CWETEASFRPTFQNLVPI 282
Query: 116 LEGGLEALQ 124
L+ E Q
Sbjct: 283 LQTAQEKYQ 291
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
A+ + + APE N+G + KSDV+ FG+ + E+V
Sbjct: 165 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIV 199
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT ++APEV G K+D++ FG+T +EL
Sbjct: 183 GTPCWMAPEVM-EQVRGYDFKADIWSFGITAIELA 216
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 18/119 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N+G + KSDV+ FG+ + E+V G+T+ +
Sbjct: 166 AKFPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN----- 218
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122
LE G + R EE ++R C + P DR + +LE A
Sbjct: 219 ----LERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T +
Sbjct: 207 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICTID 257
Query: 84 EEVIVRKMIIV 94
+I+RK ++
Sbjct: 258 VYMIMRKCWMI 268
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T +
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICTID 250
Query: 84 EEVIVRKMIIV 94
+I+RK ++
Sbjct: 251 VYMIMRKCWMI 261
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICTID 249
Query: 84 EEVIVRKMIIV 94
+I+RK ++
Sbjct: 250 VYMIMRKCWMI 260
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T +
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICTID 249
Query: 84 EEVIVRKMIIV 94
+I+RK ++
Sbjct: 250 VYMIMRKCWMI 260
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 24 SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83
+H+SDV+ +G+TV EL+ + G+ + + +LE GE L + + T +
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS---------ILEKGERLPQPPICTID 247
Query: 84 EEVIVRKMIIV 94
+I+RK ++
Sbjct: 248 VYMIMRKCWMI 258
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDW 63
A+ + + APE N S KSDV+ FG+ + E+ + G+ +
Sbjct: 191 AKFPIKWTAPESLAYN--TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--------- 239
Query: 64 FYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117
Y LLE G + E+ E K+ + C + +P+DR S ++ + E
Sbjct: 240 VYDLLEKGYRM-------EQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFE 286
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 26 KSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85
+SDV+ FG+ + E+V + N G+ P+ + LL+ G ++R +EE
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIP---------PERLFNLLKTGHRMERPDNCSEE-- 280
Query: 86 VIVRKMIIVRLWCIQTNPSDR---SSMSKAVEML 116
M + L C + P R + +SK +E +
Sbjct: 281 -----MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 26 KSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85
+SDV+ FG+ + E+V + N G+ P+ + LL+ G ++R +EE
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIP---------PERLFNLLKTGHRMERPDNCSEE-- 280
Query: 86 VIVRKMIIVRLWCIQTNPSDR---SSMSKAVEML 116
M + L C + P R + +SK +E +
Sbjct: 281 -----MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.0 bits (66), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 19/94 (20%)
Query: 26 KSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85
+SDV+ FG+ + E+V + N G+ P+ + LL+ G ++R +EE
Sbjct: 232 QSDVWSFGVLLWEIVTLGGNPYPGIP---------PERLFNLLKTGHRMERPDNCSEE-- 280
Query: 86 VIVRKMIIVRLWCIQTNPSDR---SSMSKAVEML 116
M + L C + P R + +SK +E +
Sbjct: 281 -----MYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 194 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 194 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 242
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
D GT +YIAPEV C+ G S + D++ G + L+
Sbjct: 185 DLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLL 220
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 184 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 232
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
D GT +YIAPEV C+ G S + D++ G + L+
Sbjct: 201 DLCGTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLL 236
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 192 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 240
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 178 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 29.6 bits (65), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GTV Y+APEV R G + +D + FG+ + E++
Sbjct: 188 GTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEML 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 178 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 226
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 174 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 222
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 172 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GTV Y+APEV R G + +D + FG+ + E++
Sbjct: 189 GTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEML 221
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GTV Y+APEV R G + +D + FG+ + E++
Sbjct: 188 GTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEML 220
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 207
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 29.6 bits (65), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
A+ + + APE NFG + KS+V+ FG+ + E+V
Sbjct: 170 AKFPIKWTAPEAI--NFGCFTIKSNVWSFGILLYEIV 204
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 223
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM 219
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 230
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 29.3 bits (64), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 29.3 bits (64), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G++ ++APEV ++ S +SDVY FG+ + EL+
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT +YIAPEV C+ G S + D++ G + L+
Sbjct: 204 GTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLL 236
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT +YIAPEV C+ G S + D++ G + L+
Sbjct: 204 GTPNYIAPEVLCKK--GHSFEVDIWSLGCILYTLL 236
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVR 43
A GT ++APEV + KSDVY FG+ + EL ++
Sbjct: 199 AAGTPEWMAPEVLRDEPS--NEKSDVYSFGVILWELATLQ 236
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVR 43
A GT ++APEV + KSDVY FG+ + EL ++
Sbjct: 199 AAGTPEWMAPEVLRDEPS--NEKSDVYSFGVILWELATLQ 236
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 536 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 584
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 29.3 bits (64), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM 58
V + APE C N+ S KSDV+ FG+ + E G+ + T M
Sbjct: 537 VKWYAPE--CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM 585
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 28.9 bits (63), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 2 LDARGTVSYIAPEVFCR--NFGGISHKSDVYGFGMTVLELVGVR 43
+DA G Y+APE N G S KSD++ G+T++EL +R
Sbjct: 212 IDA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 6 GTVSYIAPEVF-CRNFGGISHKSDVYGFGMTVLELV 40
G+V ++APEV ++ S +SDVY +G+ + EL+
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLE 38
+ + APE C NF S +SDV+ +G+T+ E
Sbjct: 177 LKWYAPE--CINFRKFSSRSDVWSYGVTMWE 205
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
+A GT Y+APEVF R+ ++ K D++ G+ + L+
Sbjct: 185 NAAGTALYMAPEVFKRD---VTFKCDIWSAGVVMYFLL 219
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 2 LDARGTVSYIAPEVFC--RNFGGISHKSDVYGFGMTVLELVGVR 43
+DA G Y+APE N G S KSD++ G+T++EL +R
Sbjct: 168 IDA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 210
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGV-THTSSTEMYFPDWF 64
GT Y++PE N SHK D++ G+ + EL+ + V T T + FP F
Sbjct: 192 GTKLYMSPEQIHGN--SYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLF 249
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 13/73 (17%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM--------- 58
V + APE N+G S +SDV+ FG+ + E + + +++ + E
Sbjct: 279 VKWTAPEAL--NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC 336
Query: 59 --YFPDWFYKLLE 69
PD ++L+E
Sbjct: 337 PELCPDAVFRLME 349
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
+ + APE C NF S +SDV+ +G+T+ E +
Sbjct: 503 LKWYAPE--CINFRKFSSRSDVWSYGVTMWEAL 533
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLEL-----VGVRNNTASGVTHTSST 56
V + +PEVF +F S KSDV+ FG+ + E+ + N + S V ST
Sbjct: 169 VKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 220
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 13/73 (17%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEM--------- 58
V + APE N+G S +SDV+ FG+ + E + + +++ + E
Sbjct: 279 VKWTAPEAL--NYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC 336
Query: 59 --YFPDWFYKLLE 69
PD ++L+E
Sbjct: 337 PELCPDAVFRLME 349
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLEL-----VGVRNNTASGVTHTSST 56
V + +PEVF +F S KSDV+ FG+ + E+ + N + S V ST
Sbjct: 166 VKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 217
>pdb|1A12|A Chain A, Regulator Of Chromosome Condensation (Rcc1) Of Human
pdb|1A12|B Chain B, Regulator Of Chromosome Condensation (Rcc1) Of Human
pdb|1A12|C Chain C, Regulator Of Chromosome Condensation (Rcc1) Of Human
Length = 413
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 1 MLDARGTVSYIA-PEVFCRNFG--GISHKSDVYGFGMTVLELVG 41
ML +RG+ ++ + FC + ISH+ VYGFG++ +G
Sbjct: 222 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 265
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLEL-----VGVRNNTASGVTHTSST 56
V + +PEVF +F S KSDV+ FG+ + E+ + N + S V ST
Sbjct: 171 VKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 222
>pdb|1I2M|B Chain B, Ran-Rcc1-So4 Complex
pdb|1I2M|D Chain D, Ran-Rcc1-So4 Complex
Length = 402
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 1 MLDARGTVSYIA-PEVFCRNFG--GISHKSDVYGFGMTVLELVG 41
ML +RG+ ++ + FC + ISH+ VYGFG++ +G
Sbjct: 211 MLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLG 254
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT Y++PE N SHK D++ G+ + EL+
Sbjct: 238 GTKLYMSPEQIHGN--NYSHKVDIFSLGLILFELL 270
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLEL-----VGVRNNTASGVTHTSST 56
V + +PEVF +F S KSDV+ FG+ + E+ + N + S V ST
Sbjct: 168 VKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 219
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
A+ + + APE +G + KSDV+ FG+ + ELV
Sbjct: 166 AKFPIKWTAPEAAL--YGRFTIKSDVWSFGILLTELV 200
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLEL-----VGVRNNTASGVTHTSST 56
V + +PEVF +F S KSDV+ FG+ + E+ + N + S V ST
Sbjct: 168 VKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 219
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLEL-----VGVRNNTASGVTHTSST 56
V + +PEVF +F S KSDV+ FG+ + E+ + N + S V ST
Sbjct: 188 VKWASPEVF--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST 239
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGV 42
V + APEVF ++ S KSDV+ FG+ + E+ +
Sbjct: 169 VKWSAPEVF--HYFKYSSKSDVWAFGILMWEVFSL 201
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 6 GTVSYIAPEV-FCRNFGG--ISHKSDVYGFGMTVLE----------------LVGVRNNT 46
GT ++APEV C +K+DV+ G+T++E L+ + +
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 230
Query: 47 ASGVTHTSSTEMYFPDWFYKLLEPGED-------LKRHGLVTEEEEVIVRKMI 92
+ S F D+ K LE D L +H VT + +R++I
Sbjct: 231 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELI 283
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 2 LDARGTVSYIAPEVFCR--NFGGISHKSDVYGFGMTVLELVGVR 43
+DA G Y APE N G S KSD++ G+T +EL +R
Sbjct: 195 IDA-GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILR 237
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWF 64
G Y+APE+ ++G +DV+ G+T+LE+ G + Y P F
Sbjct: 218 GDPRYMAPELLQGSYG---TAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEF 273
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 26/130 (20%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS---------GVTHT 53
D V + APE ++ I+ SDV+ FG+T+ EL+ ++ +S G TH
Sbjct: 176 DRDSPVFWYAPECLMQSKFYIA--SDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 233
Query: 54 SSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAV 113
T + L+ G+ L +E ++RK C + PS+R+S +
Sbjct: 234 QMTVTRLVN----TLKEGKRLPCPPNCPDEVYQLMRK-------CWEFQPSNRTSFQNLI 282
Query: 114 EMLEGGLEAL 123
E G EAL
Sbjct: 283 E----GFEAL 288
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 6 GTVSYIAPEV-FCRNFGG--ISHKSDVYGFGMTVLE----------------LVGVRNNT 46
GT ++APEV C +K+DV+ G+T++E L+ + +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 47 ASGVTHTSSTEMYFPDWFYKLLEPGED-------LKRHGLVTEEEEVIVRKMI 92
+ S F D+ K LE D L +H VT + +R++I
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELI 309
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 6 GTVSYIAPEV-FCRNFGG--ISHKSDVYGFGMTVLE----------------LVGVRNNT 46
GT ++APEV C +K+DV+ G+T++E L+ + +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 47 ASGVTHTSSTEMYFPDWFYKLLEPGED-------LKRHGLVTEEEEVIVRKMI 92
+ S F D+ K LE D L +H VT + +R++I
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELI 309
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 26/130 (20%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS---------GVTHT 53
D V + APE ++ I+ SDV+ FG+T+ EL+ ++ +S G TH
Sbjct: 188 DRDSPVFWYAPECLMQSKFYIA--SDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHG 245
Query: 54 SSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAV 113
T + L+ G+ L +E ++RK C + PS+R+S +
Sbjct: 246 QMTVTRLVN----TLKEGKRLPCPPNCPDEVYQLMRK-------CWEFQPSNRTSFQNLI 294
Query: 114 EMLEGGLEAL 123
E G EAL
Sbjct: 295 E----GFEAL 300
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 26/113 (23%)
Query: 6 GTVSYIAPEV-FCRNFGG--ISHKSDVYGFGMTVLE----------------LVGVRNNT 46
GT ++APEV C +K+DV+ G+T++E L+ + +
Sbjct: 197 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE 256
Query: 47 ASGVTHTSSTEMYFPDWFYKLLEPGED-------LKRHGLVTEEEEVIVRKMI 92
+ S F D+ K LE D L +H VT + +R++I
Sbjct: 257 PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKPIRELI 309
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 67 LLEPGEDLKRH-GLVTEEEEVIVRKMI----IVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121
L+E E++K++ L TEEE ++ + I I++ ++P +S A+E ++G L
Sbjct: 82 LVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKS----AIEHVQGHLV 137
Query: 122 ALQVPPKPF 130
QVPP F
Sbjct: 138 KKQVPPDLF 146
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 67 LLEPGEDLKRH-GLVTEEEEVIVRKMI----IVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121
L+E E++K++ L TEEE ++ + I I++ ++P +S A+E ++G L
Sbjct: 82 LVEFYEEIKKYEKLETEEERLVCSREIFDTYIMKELLACSHPFSKS----AIEHVQGHLV 137
Query: 122 ALQVPPKPF 130
QVPP F
Sbjct: 138 KKQVPPDLF 146
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG 41
M + GT YIAPEV + + K DV+ G+ + L+
Sbjct: 195 MKERLGTAYYIAPEVLRKKY---DEKCDVWSIGVILFILLA 232
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
M D GT YIAPEV G K DV+ G+ + L+
Sbjct: 191 MKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILL 227
>pdb|3V5N|A Chain A, The Crystal Structure Of Oxidoreductase From Sinorhizobium
Meliloti
pdb|3V5N|B Chain B, The Crystal Structure Of Oxidoreductase From Sinorhizobium
Meliloti
pdb|3V5N|C Chain C, The Crystal Structure Of Oxidoreductase From Sinorhizobium
Meliloti
pdb|3V5N|D Chain D, The Crystal Structure Of Oxidoreductase From Sinorhizobium
Meliloti
Length = 417
Score = 26.2 bits (56), Expect = 5.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 96 LWCIQTNPSDRSSMSKAVEMLEGGLEALQVPP 127
LWC Q P + + V +GGLE Q P
Sbjct: 287 LWCSQVAPGHENGLXVRVYGTKGGLEWTQKDP 318
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYF 60
M D GT YIAPEV G K DV+ G+ + L+ S T ++
Sbjct: 180 MKDRIGTAYYIAPEVL---RGTYDEKCDVWSAGVILYILL-------------SGTPPFY 223
Query: 61 PDWFYKLLEPGE------DLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114
Y +L+ E DL + ++++ + ++RKM+ +PS R + ++ +E
Sbjct: 224 GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTF-------HPSLRITATQCLE 276
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 26.2 bits (56), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 29/120 (24%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYF 60
M D GT YIAPEV G K DV+ G+ + L+ S T ++
Sbjct: 180 MKDRIGTAYYIAPEVL---RGTYDEKCDVWSAGVILYILL-------------SGTPPFY 223
Query: 61 PDWFYKLLEPGE------DLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114
Y +L+ E DL + ++++ + ++RKM+ +PS R + ++ +E
Sbjct: 224 GKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTF-------HPSLRITATQCLE 276
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 26.2 bits (56), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
M D GT YIAPEV G K DV+ G+ + L+
Sbjct: 185 MKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILL 221
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 26.2 bits (56), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS---------GVTHT 53
D V + APE C + SDV+ FG+T+ EL+ +++ S G+
Sbjct: 196 DGDSPVFWYAPE--CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQG 253
Query: 54 SSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAV 113
T + + LLE GE L R E +++ C +T S R + +
Sbjct: 254 QMTVLRLTE----LLERGERLPRPDKCPAEVYHLMKN-------CWETEASFRPTFENLI 302
Query: 114 EMLEGGLEALQ 124
+L+ E Q
Sbjct: 303 PILKTVHEKYQ 313
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
M D GT YIAPEV G K DV+ G+ + L+
Sbjct: 208 MKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILL 244
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 25.8 bits (55), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
M D GT YIAPEV G K DV+ G+ + L+
Sbjct: 209 MKDKIGTAYYIAPEVL---HGTYDEKCDVWSTGVILYILL 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRN 44
G ++APE+ N K DV+ FG+ + E++G N
Sbjct: 184 GNPYWMAPEMI--NGRSYDEKVDVFSFGIVLCEIIGRVN 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG 41
M D GT YIAPEV G K DV+ G+ + L+
Sbjct: 180 MKDRIGTAYYIAPEVLR---GTYDEKCDVWSAGVILYILLS 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 25.8 bits (55), Expect = 7.8, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
D GT YIAPEV + + + K DV+ G+ + L+
Sbjct: 207 DRLGTAYYIAPEVLKKKY---NEKCDVWSCGVIMYILL 241
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFG 33
GT +YI+PE+ R+ G+ +SDV+ G
Sbjct: 174 GTPNYISPEIATRSAHGL--ESDVWSLG 199
>pdb|3GGG|D Chain D, The Crystal Structure Of A. Aeolicus Prephenate
Dehydrogenase In Complex With Tyrosine And Nad+
pdb|3GGG|A Chain A, The Crystal Structure Of A. Aeolicus Prephenate
Dehydrogenase In Complex With Tyrosine And Nad+
pdb|3GGO|A Chain A, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus With Hpp And Nadh
pdb|3GGO|B Chain B, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus With Hpp And Nadh
pdb|3GGO|C Chain C, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus With Hpp And Nadh
pdb|3GGO|D Chain D, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus With Hpp And Nadh
pdb|3GGP|A Chain A, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus In Complex With Hydroxyphenyl Propionate And
Nad+
pdb|3GGP|B Chain B, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus In Complex With Hydroxyphenyl Propionate And
Nad+
pdb|3GGP|C Chain C, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus In Complex With Hydroxyphenyl Propionate And
Nad+
pdb|3GGP|D Chain D, Crystal Structure Of Prephenate Dehydrogenase From A.
Aeolicus In Complex With Hydroxyphenyl Propionate And
Nad+
pdb|3GGG|B Chain B, The Crystal Structure Of A. Aeolicus Prephenate
Dehydrogenase In Complex With Tyrosine And Nad+
pdb|3GGG|C Chain C, The Crystal Structure Of A. Aeolicus Prephenate
Dehydrogenase In Complex With Tyrosine And Nad+
Length = 314
Score = 25.4 bits (54), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMT 35
D G V Y++PE+ FG +SH F +
Sbjct: 195 DVGGVVEYMSPELHDYVFGVVSHLPHAVAFALV 227
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT +YIAPEV + G S + DV+ G + L+
Sbjct: 183 GTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLL 215
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 25.4 bits (54), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV 40
GT +YIAPEV + G S + DV+ G + L+
Sbjct: 201 GTPNYIAPEVLSKK--GHSFEVDVWSIGCIMYTLL 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,979,976
Number of Sequences: 62578
Number of extensions: 145661
Number of successful extensions: 734
Number of sequences better than 100.0: 208
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 138
Number of HSP's that attempted gapping in prelim test: 634
Number of HSP's gapped (non-prelim): 208
length of query: 133
length of database: 14,973,337
effective HSP length: 88
effective length of query: 45
effective length of database: 9,466,473
effective search space: 425991285
effective search space used: 425991285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)