Query 040499
Match_columns 133
No_of_seqs 117 out of 2200
Neff 11.5
Searched_HMMs 46136
Date Fri Mar 29 09:04:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040499.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040499hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0192 Tyrosine kinase specif 99.9 1.4E-21 3.1E-26 127.8 7.8 106 2-123 202-307 (362)
2 KOG4721 Serine/threonine prote 99.9 6.9E-22 1.5E-26 132.8 5.0 97 3-117 270-366 (904)
3 KOG0201 Serine/threonine prote 99.8 1.6E-21 3.5E-26 126.7 5.7 93 3-114 170-262 (467)
4 KOG0197 Tyrosine kinases [Sign 99.8 3.2E-21 7E-26 127.4 5.8 97 7-122 367-464 (468)
5 KOG1026 Nerve growth factor re 99.8 4.5E-21 9.8E-26 132.6 4.9 97 8-123 669-766 (774)
6 KOG0578 p21-activated serine/t 99.8 1.4E-20 3.1E-25 125.4 6.9 95 2-114 427-522 (550)
7 KOG0581 Mitogen-activated prot 99.8 2.4E-20 5.2E-25 119.0 7.4 99 2-114 235-334 (364)
8 KOG0582 Ste20-like serine/thre 99.8 1.5E-19 3.2E-24 118.1 7.3 104 2-114 188-292 (516)
9 smart00750 KIND kinase non-cat 99.8 6.5E-19 1.4E-23 105.5 7.6 103 5-119 65-169 (176)
10 KOG1095 Protein tyrosine kinas 99.8 1.6E-19 3.6E-24 128.6 5.2 96 8-122 868-964 (1025)
11 KOG4257 Focal adhesion tyrosin 99.8 2.1E-19 4.4E-24 122.1 5.1 96 7-121 555-651 (974)
12 PHA02988 hypothetical protein; 99.8 5.4E-19 1.2E-23 113.1 6.3 101 4-120 180-280 (283)
13 KOG0196 Tyrosine kinase, EPH ( 99.8 3.7E-20 7.9E-25 127.8 0.7 101 8-127 798-899 (996)
14 KOG0591 NIMA (never in mitosis 99.8 4.4E-19 9.6E-24 110.4 3.4 99 2-118 186-284 (375)
15 KOG1187 Serine/threonine prote 99.7 1.5E-17 3.2E-22 109.4 8.4 113 5-122 239-355 (361)
16 cd05048 PTKc_Ror Catalytic Dom 99.7 8.2E-18 1.8E-22 107.4 7.0 96 5-119 187-283 (283)
17 KOG1024 Receptor-like protein 99.7 2.1E-18 4.5E-23 111.8 3.5 96 7-121 461-557 (563)
18 cd05102 PTKc_VEGFR3 Catalytic 99.7 1.4E-17 3E-22 108.9 7.1 99 5-121 237-336 (338)
19 PLN00113 leucine-rich repeat r 99.7 2.2E-17 4.8E-22 120.3 8.4 113 4-123 838-955 (968)
20 KOG0575 Polo-like serine/threo 99.7 7.2E-18 1.6E-22 113.5 5.1 93 2-114 176-268 (592)
21 KOG0200 Fibroblast/platelet-de 99.7 1.1E-17 2.5E-22 116.5 6.2 94 8-119 485-579 (609)
22 KOG4278 Protein tyrosine kinas 99.7 1.6E-17 3.4E-22 113.4 6.1 96 8-122 430-526 (1157)
23 KOG0596 Dual specificity; seri 99.7 1.3E-17 2.9E-22 111.7 5.6 97 4-114 521-626 (677)
24 KOG0198 MEKK and related serin 99.7 5.8E-18 1.3E-22 108.5 3.7 96 3-114 180-275 (313)
25 KOG0193 Serine/threonine prote 99.7 1.5E-17 3.3E-22 112.2 5.5 105 5-122 551-656 (678)
26 cd05094 PTKc_TrkC Catalytic do 99.7 4.9E-17 1.1E-21 104.4 6.3 98 5-121 186-284 (291)
27 cd05049 PTKc_Trk Catalytic dom 99.7 9.6E-17 2.1E-21 102.3 7.4 94 6-118 186-280 (280)
28 cd05116 PTKc_Syk Catalytic dom 99.7 1.1E-16 2.4E-21 101.0 7.1 94 7-119 161-255 (257)
29 cd05064 PTKc_EphR_A10 Catalyti 99.7 9.8E-17 2.1E-21 101.8 6.6 95 6-119 170-265 (266)
30 cd05093 PTKc_TrkB Catalytic do 99.7 7.3E-17 1.6E-21 103.4 6.1 98 6-122 184-282 (288)
31 cd05091 PTKc_Ror2 Catalytic do 99.7 1.6E-16 3.5E-21 101.5 7.3 95 5-118 187-282 (283)
32 KOG0615 Serine/threonine prote 99.7 8.7E-18 1.9E-22 109.0 1.2 98 1-114 335-436 (475)
33 cd05111 PTK_HER3 Pseudokinase 99.7 1.7E-16 3.7E-21 101.4 7.0 98 5-121 172-270 (279)
34 KOG0598 Ribosomal protein S6 k 99.7 5.6E-17 1.2E-21 103.7 4.5 87 2-107 183-269 (357)
35 cd05052 PTKc_Abl Catalytic dom 99.7 1.9E-16 4E-21 100.3 6.9 94 7-119 168-262 (263)
36 cd05106 PTKc_CSF-1R Catalytic 99.7 1.8E-16 3.8E-21 105.2 7.0 97 6-120 276-373 (374)
37 PF07714 Pkinase_Tyr: Protein 99.7 4.3E-17 9.3E-22 103.1 3.8 93 5-116 166-259 (259)
38 cd05054 PTKc_VEGFR Catalytic d 99.7 2.2E-16 4.8E-21 103.4 7.1 99 5-121 236-335 (337)
39 KOG0199 ACK and related non-re 99.7 1.1E-16 2.3E-21 110.2 5.3 87 8-113 279-366 (1039)
40 KOG0577 Serine/threonine prote 99.7 1.3E-16 2.9E-21 108.2 5.6 97 2-114 180-277 (948)
41 PTZ00283 serine/threonine prot 99.7 1.9E-16 4.1E-21 108.3 6.4 93 3-114 204-296 (496)
42 KOG0579 Ste20-like serine/thre 99.7 1.5E-16 3.3E-21 108.9 5.8 95 3-114 189-288 (1187)
43 cd05072 PTKc_Lyn Catalytic dom 99.7 3.6E-16 7.7E-21 98.8 7.2 95 6-119 166-261 (261)
44 cd05060 PTKc_Syk_like Catalyti 99.7 3E-16 6.4E-21 99.0 6.8 95 7-120 161-256 (257)
45 KOG0588 Serine/threonine prote 99.7 2.3E-16 5.1E-21 107.7 6.5 99 2-120 169-270 (786)
46 KOG0589 Serine/threonine prote 99.7 1.4E-16 3E-21 105.1 5.3 95 2-115 164-258 (426)
47 cd05058 PTKc_Met_Ron Catalytic 99.7 3.1E-16 6.7E-21 99.1 6.6 96 6-120 164-260 (262)
48 cd05104 PTKc_Kit Catalytic dom 99.7 4E-16 8.7E-21 103.5 7.2 96 6-119 278-374 (375)
49 cd08228 STKc_Nek6 Catalytic do 99.7 7.7E-16 1.7E-20 97.6 8.1 99 4-119 166-265 (267)
50 cd05090 PTKc_Ror1 Catalytic do 99.7 5.8E-16 1.3E-20 99.0 7.4 95 5-118 187-282 (283)
51 cd05092 PTKc_TrkA Catalytic do 99.6 4.7E-16 1E-20 99.3 6.9 94 6-118 186-280 (280)
52 cd05114 PTKc_Tec_Rlk Catalytic 99.6 6E-16 1.3E-20 97.6 7.2 93 6-117 163-256 (256)
53 cd05053 PTKc_FGFR Catalytic do 99.6 4.2E-16 9.1E-21 100.0 6.6 96 6-120 196-292 (293)
54 cd05089 PTKc_Tie1 Catalytic do 99.6 3.4E-16 7.3E-21 100.8 6.1 99 7-124 181-280 (297)
55 cd05062 PTKc_IGF-1R Catalytic 99.6 4.7E-16 1E-20 99.1 6.4 94 6-118 183-277 (277)
56 PTZ00284 protein kinase; Provi 99.6 6.2E-16 1.3E-20 105.2 7.4 45 3-49 304-348 (467)
57 KOG4279 Serine/threonine prote 99.6 3.8E-17 8.3E-22 112.7 1.4 98 2-114 734-831 (1226)
58 cd05035 PTKc_Axl_like Catalyti 99.6 6.9E-16 1.5E-20 98.0 7.1 95 6-119 177-272 (273)
59 cd05032 PTKc_InsR_like Catalyt 99.6 6.4E-16 1.4E-20 98.4 6.9 95 5-118 182-277 (277)
60 cd05043 PTK_Ryk Pseudokinase d 99.6 4.3E-16 9.4E-21 99.4 5.8 97 6-121 181-278 (280)
61 cd08229 STKc_Nek7 Catalytic do 99.6 1.7E-15 3.6E-20 96.0 8.3 100 4-120 166-266 (267)
62 cd05045 PTKc_RET Catalytic dom 99.6 6.9E-16 1.5E-20 99.0 6.5 97 6-121 191-288 (290)
63 PTZ00267 NIMA-related protein 99.6 5.1E-16 1.1E-20 105.9 6.1 93 3-114 230-322 (478)
64 cd05115 PTKc_Zap-70 Catalytic 99.6 7.5E-16 1.6E-20 97.3 6.5 94 7-119 161-255 (257)
65 cd05070 PTKc_Fyn_Yrk Catalytic 99.6 1.4E-15 2.9E-20 96.2 7.4 94 6-118 165-259 (260)
66 cd05067 PTKc_Lck_Blk Catalytic 99.6 1.5E-15 3.2E-20 96.0 7.4 94 6-118 165-259 (260)
67 cd05036 PTKc_ALK_LTK Catalytic 99.6 1.1E-15 2.5E-20 97.4 6.9 93 7-118 184-277 (277)
68 cd05063 PTKc_EphR_A2 Catalytic 99.6 1.3E-15 2.8E-20 96.6 7.1 93 8-119 174-267 (268)
69 cd05082 PTKc_Csk Catalytic dom 99.6 1.2E-15 2.5E-20 96.3 6.8 95 6-119 161-256 (256)
70 cd05033 PTKc_EphR Catalytic do 99.6 1.4E-15 3E-20 96.4 7.0 95 6-119 170-265 (266)
71 cd05108 PTKc_EGFR Catalytic do 99.6 1E-15 2.2E-20 99.4 6.5 96 7-121 174-270 (316)
72 cd05044 PTKc_c-ros Catalytic d 99.6 1.3E-15 2.7E-20 96.7 6.7 94 6-118 175-269 (269)
73 cd05075 PTKc_Axl Catalytic dom 99.6 1.6E-15 3.5E-20 96.3 7.2 95 6-119 176-271 (272)
74 cd05055 PTKc_PDGFR Catalytic d 99.6 1.6E-15 3.4E-20 98.0 7.3 96 6-119 205-301 (302)
75 cd08529 STKc_FA2-like Catalyti 99.6 1E-15 2.2E-20 96.3 6.3 92 4-114 161-252 (256)
76 KOG0610 Putative serine/threon 99.6 2E-15 4.3E-20 98.3 7.5 92 3-114 294-391 (459)
77 KOG0592 3-phosphoinositide-dep 99.6 8.4E-16 1.8E-20 102.8 5.8 93 2-114 245-337 (604)
78 cd08224 STKc_Nek6_Nek7 Catalyt 99.6 2.8E-15 6.2E-20 94.9 8.0 100 4-120 166-266 (267)
79 cd05068 PTKc_Frk_like Catalyti 99.6 2E-15 4.4E-20 95.4 7.2 93 8-119 168-261 (261)
80 cd05069 PTKc_Yes Catalytic dom 99.6 1.9E-15 4.1E-20 95.6 7.0 94 6-118 165-259 (260)
81 cd05047 PTKc_Tie Catalytic dom 99.6 1.2E-15 2.6E-20 97.0 6.1 95 7-120 174-269 (270)
82 cd05113 PTKc_Btk_Bmx Catalytic 99.6 1.3E-15 2.9E-20 96.1 6.2 93 6-117 163-256 (256)
83 cd05105 PTKc_PDGFR_alpha Catal 99.6 1.6E-15 3.6E-20 101.3 6.9 99 5-121 300-399 (400)
84 cd05148 PTKc_Srm_Brk Catalytic 99.6 2E-15 4.4E-20 95.4 7.0 95 6-119 166-261 (261)
85 cd05109 PTKc_HER2 Catalytic do 99.6 1.3E-15 2.8E-20 97.2 6.0 98 6-122 173-271 (279)
86 cd05101 PTKc_FGFR2 Catalytic d 99.6 1.4E-15 3.1E-20 98.2 6.2 98 6-122 201-299 (304)
87 cd08528 STKc_Nek10 Catalytic d 99.6 2.7E-15 5.8E-20 95.2 7.3 97 3-118 172-269 (269)
88 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.6 3.3E-15 7.1E-20 95.5 7.7 106 6-120 172-282 (283)
89 cd06649 PKc_MEK2 Catalytic dom 99.6 4.9E-15 1.1E-19 96.8 8.6 43 4-48 162-204 (331)
90 KOG0033 Ca2+/calmodulin-depend 99.6 1.5E-15 3.3E-20 93.4 5.7 93 3-114 171-266 (355)
91 cd05071 PTKc_Src Catalytic dom 99.6 2.5E-15 5.5E-20 95.1 6.8 96 6-120 165-261 (262)
92 cd05096 PTKc_DDR1 Catalytic do 99.6 5.1E-16 1.1E-20 100.2 3.7 99 5-118 201-304 (304)
93 cd08219 STKc_Nek3 Catalytic do 99.6 7.9E-16 1.7E-20 96.9 4.5 93 4-115 160-252 (255)
94 KOG2345 Serine/threonine prote 99.6 1.2E-15 2.6E-20 93.6 5.0 100 6-120 200-301 (302)
95 cd05050 PTKc_Musk Catalytic do 99.6 2.8E-15 6E-20 96.1 6.9 94 6-118 194-288 (288)
96 cd05107 PTKc_PDGFR_beta Cataly 99.6 2.1E-15 4.5E-20 100.9 6.5 98 5-120 302-400 (401)
97 KOG0694 Serine/threonine prote 99.6 9.1E-16 2E-20 104.9 4.7 88 2-109 526-613 (694)
98 cd05098 PTKc_FGFR1 Catalytic d 99.6 1.7E-15 3.8E-20 97.9 5.8 97 7-122 205-302 (307)
99 cd07862 STKc_CDK6 Catalytic do 99.6 5E-16 1.1E-20 99.5 3.3 44 4-49 169-212 (290)
100 PHA02882 putative serine/threo 99.6 3.7E-15 7.9E-20 96.0 7.3 102 4-117 193-294 (294)
101 cd06609 STKc_MST3_like Catalyt 99.6 3.4E-15 7.3E-20 95.0 7.0 92 4-114 158-250 (274)
102 cd05059 PTKc_Tec_like Catalyti 99.6 3E-15 6.4E-20 94.5 6.7 91 7-116 164-255 (256)
103 cd05085 PTKc_Fer Catalytic dom 99.6 3.5E-15 7.6E-20 93.7 7.0 92 7-117 157-249 (250)
104 cd05112 PTKc_Itk Catalytic dom 99.6 3.2E-15 6.9E-20 94.2 6.8 93 6-117 163-256 (256)
105 cd05073 PTKc_Hck Catalytic dom 99.6 4.7E-15 1E-19 93.7 7.4 94 6-118 165-259 (260)
106 cd00192 PTKc Catalytic domain 99.6 4E-15 8.7E-20 93.7 7.0 95 4-117 167-262 (262)
107 cd06619 PKc_MKK5 Catalytic dom 99.6 6E-15 1.3E-19 94.2 7.9 100 3-114 152-252 (279)
108 cd05040 PTKc_Ack_like Catalyti 99.6 3.9E-15 8.4E-20 93.9 6.7 96 5-118 161-257 (257)
109 cd05051 PTKc_DDR Catalytic dom 99.6 1.6E-15 3.4E-20 97.5 5.0 99 5-118 193-296 (296)
110 KOG4645 MAPKKK (MAP kinase kin 99.6 1.9E-16 4.2E-21 114.4 0.9 96 3-114 1397-1493(1509)
111 cd05056 PTKc_FAK Catalytic dom 99.6 4.9E-15 1.1E-19 94.1 7.1 96 7-121 171-267 (270)
112 cd07859 STKc_TDY_MAPK_plant Ca 99.6 4.1E-15 8.9E-20 97.2 6.9 46 4-49 166-211 (338)
113 cd05084 PTKc_Fes Catalytic dom 99.6 3.2E-15 6.9E-20 94.1 6.1 92 8-118 160-252 (252)
114 KOG0574 STE20-like serine/thre 99.6 2.7E-16 5.8E-21 99.4 1.2 95 3-114 188-282 (502)
115 cd06642 STKc_STK25-YSK1 Cataly 99.6 5.2E-15 1.1E-19 94.3 7.1 91 5-114 162-252 (277)
116 cd05099 PTKc_FGFR4 Catalytic d 99.6 2.3E-15 5E-20 97.7 5.5 98 7-123 199-297 (314)
117 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.6 4E-15 8.6E-20 94.0 6.4 94 4-117 164-258 (258)
118 cd08220 STKc_Nek8 Catalytic do 99.6 6E-15 1.3E-19 92.9 7.1 92 4-114 161-252 (256)
119 KOG0583 Serine/threonine prote 99.6 5.9E-15 1.3E-19 97.5 7.2 93 2-114 179-274 (370)
120 cd08223 STKc_Nek4 Catalytic do 99.6 4.5E-15 9.8E-20 93.5 6.4 92 4-114 162-253 (257)
121 cd05571 STKc_PKB Catalytic dom 99.6 1.7E-15 3.6E-20 98.7 4.5 91 4-114 155-250 (323)
122 cd06625 STKc_MEKK3_like Cataly 99.6 5.7E-15 1.2E-19 93.3 6.8 93 4-114 167-259 (263)
123 cd05110 PTKc_HER4 Catalytic do 99.6 3.9E-15 8.5E-20 96.1 6.1 96 6-120 173-269 (303)
124 cd05100 PTKc_FGFR3 Catalytic d 99.6 5.5E-15 1.2E-19 96.7 6.7 97 7-122 199-296 (334)
125 cd08217 STKc_Nek2 Catalytic do 99.6 5.8E-15 1.3E-19 93.2 6.7 92 4-114 170-261 (265)
126 cd05039 PTKc_Csk_like Catalyti 99.6 7.7E-15 1.7E-19 92.5 7.2 95 6-119 161-256 (256)
127 cd05631 STKc_GRK4 Catalytic do 99.6 6.1E-15 1.3E-19 94.5 6.8 100 4-119 161-267 (285)
128 cd05041 PTKc_Fes_like Catalyti 99.6 6.3E-15 1.4E-19 92.6 6.7 93 7-118 158-251 (251)
129 cd06628 STKc_MAPKKK_Byr2_like 99.6 6.6E-15 1.4E-19 93.3 6.7 92 4-114 172-263 (267)
130 cd06637 STKc_TNIK Catalytic do 99.6 5.6E-15 1.2E-19 93.8 6.4 95 4-114 171-268 (272)
131 cd06640 STKc_MST4 Catalytic do 99.6 5.1E-15 1.1E-19 94.4 6.2 92 4-114 161-252 (277)
132 cd05077 PTK_Jak1_rpt1 Pseudoki 99.6 7.7E-15 1.7E-19 93.0 7.0 94 4-117 168-262 (262)
133 cd05088 PTKc_Tie2 Catalytic do 99.6 3.4E-15 7.3E-20 96.5 5.4 97 7-122 186-283 (303)
134 cd06616 PKc_MKK4 Catalytic dom 99.6 2.6E-15 5.7E-20 96.2 4.9 99 4-114 167-266 (288)
135 PHA03212 serine/threonine kina 99.6 2.4E-14 5.3E-19 95.5 9.5 43 4-48 243-285 (391)
136 cd05057 PTKc_EGFR_like Catalyt 99.6 5.7E-15 1.2E-19 94.2 6.3 97 7-122 174-271 (279)
137 KOG0660 Mitogen-activated prot 99.6 1.4E-14 3.1E-19 92.7 8.0 124 1-126 184-323 (359)
138 cd05065 PTKc_EphR_B Catalytic 99.6 5.3E-15 1.2E-19 93.9 6.1 93 8-119 175-268 (269)
139 cd05103 PTKc_VEGFR2 Catalytic 99.6 7.2E-15 1.6E-19 96.5 6.8 99 6-122 243-342 (343)
140 cd05066 PTKc_EphR_A Catalytic 99.6 8.6E-15 1.9E-19 92.9 6.9 94 7-119 172-266 (267)
141 PLN00034 mitogen-activated pro 99.6 1.4E-14 3E-19 95.5 8.1 98 3-114 227-327 (353)
142 KOG0983 Mitogen-activated prot 99.6 3.1E-15 6.7E-20 93.4 4.7 95 4-114 251-348 (391)
143 KOG0597 Serine-threonine prote 99.6 7.7E-15 1.7E-19 99.3 6.7 93 2-114 158-250 (808)
144 cd08218 STKc_Nek1 Catalytic do 99.6 6.6E-15 1.4E-19 92.8 6.0 91 5-114 162-252 (256)
145 cd06636 STKc_MAP4K4_6 Catalyti 99.6 8.2E-15 1.8E-19 93.6 6.3 95 4-114 181-278 (282)
146 cd05570 STKc_PKC Catalytic dom 99.6 4E-15 8.6E-20 96.8 4.9 91 4-114 156-251 (318)
147 cd06650 PKc_MEK1 Catalytic dom 99.6 2.9E-14 6.2E-19 93.3 8.7 43 4-48 162-204 (333)
148 cd05095 PTKc_DDR2 Catalytic do 99.6 3.6E-15 7.7E-20 96.0 4.4 97 7-118 195-296 (296)
149 cd06654 STKc_PAK1 Catalytic do 99.6 2E-14 4.4E-19 92.6 7.8 93 4-114 176-269 (296)
150 cd06612 STKc_MST1_2 Catalytic 99.6 1E-14 2.2E-19 91.8 6.4 92 5-114 160-252 (256)
151 cd05593 STKc_PKB_gamma Catalyt 99.6 7.1E-15 1.5E-19 96.0 5.8 92 3-114 154-250 (328)
152 cd05585 STKc_YPK1_like Catalyt 99.6 3.7E-15 8.1E-20 96.7 4.2 91 4-114 153-246 (312)
153 cd05061 PTKc_InsR Catalytic do 99.6 1.2E-14 2.6E-19 93.2 6.5 96 6-120 183-279 (288)
154 cd05600 STKc_Sid2p_Dbf2p Catal 99.6 3E-15 6.6E-20 97.8 3.8 97 3-114 157-256 (333)
155 cd05034 PTKc_Src_like Catalyti 99.6 1.5E-14 3.3E-19 91.4 6.9 94 6-118 166-260 (261)
156 cd05074 PTKc_Tyro3 Catalytic d 99.6 1.1E-14 2.5E-19 92.5 6.3 95 6-119 177-272 (273)
157 cd05618 STKc_aPKC_iota Catalyt 99.6 1E-14 2.2E-19 95.3 6.2 95 4-109 156-250 (329)
158 cd05595 STKc_PKB_beta Catalyti 99.6 8.4E-15 1.8E-19 95.4 5.8 92 3-114 154-250 (323)
159 cd05620 STKc_nPKC_delta Cataly 99.6 5.9E-15 1.3E-19 95.9 5.0 91 3-113 155-246 (316)
160 cd05589 STKc_PKN Catalytic dom 99.6 8.6E-15 1.9E-19 95.4 5.8 92 3-114 160-256 (324)
161 cd08221 STKc_Nek9 Catalytic do 99.6 1.4E-14 3.1E-19 91.3 6.6 93 4-115 161-253 (256)
162 KOG0194 Protein tyrosine kinas 99.6 1.4E-15 3E-20 102.0 2.1 98 8-124 326-425 (474)
163 PTZ00263 protein kinase A cata 99.6 5E-15 1.1E-19 96.7 4.6 91 4-114 175-270 (329)
164 cd06655 STKc_PAK2 Catalytic do 99.6 3E-14 6.4E-19 91.9 8.1 93 4-114 175-268 (296)
165 cd06651 STKc_MEKK3 Catalytic d 99.6 8.8E-15 1.9E-19 92.8 5.6 92 4-114 169-260 (266)
166 cd05626 STKc_LATS2 Catalytic d 99.6 1.7E-14 3.7E-19 95.9 7.1 96 3-114 207-304 (381)
167 cd05588 STKc_aPKC Catalytic do 99.6 1.2E-14 2.6E-19 95.0 6.2 101 3-114 155-261 (329)
168 cd08227 PK_STRAD_alpha Pseudok 99.5 1E-14 2.2E-19 95.1 5.9 45 5-49 169-213 (327)
169 cd05083 PTKc_Chk Catalytic dom 99.5 2E-14 4.4E-19 90.5 7.0 93 7-118 160-253 (254)
170 cd05079 PTKc_Jak1_rpt2 Catalyt 99.5 2.8E-14 6E-19 91.4 7.7 107 4-119 172-283 (284)
171 cd05619 STKc_nPKC_theta Cataly 99.5 6.3E-15 1.4E-19 95.8 4.7 91 4-114 156-247 (316)
172 cd06610 STKc_OSR1_SPAK Catalyt 99.5 1.1E-14 2.4E-19 92.1 5.7 98 4-114 166-263 (267)
173 cd05590 STKc_nPKC_eta Catalyti 99.5 7.4E-15 1.6E-19 95.6 5.0 87 3-109 155-241 (320)
174 cd07875 STKc_JNK1 Catalytic do 99.5 1E-14 2.2E-19 96.4 5.8 45 3-49 184-228 (364)
175 cd06624 STKc_ASK Catalytic dom 99.5 3E-14 6.5E-19 90.4 7.7 96 4-114 169-264 (268)
176 PHA03209 serine/threonine kina 99.5 1.4E-14 3E-19 95.6 6.2 41 4-46 216-256 (357)
177 cd05610 STKc_MASTL Catalytic d 99.5 1.8E-14 4E-19 101.7 7.0 94 3-114 539-633 (669)
178 cd07848 STKc_CDKL5 Catalytic d 99.5 8.9E-15 1.9E-19 93.7 4.9 44 4-49 161-204 (287)
179 cd06631 STKc_YSK4 Catalytic do 99.5 4.2E-14 9E-19 89.6 7.9 93 4-114 168-261 (265)
180 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.5 4.1E-14 9E-19 90.5 8.0 103 8-119 175-283 (284)
181 cd06620 PKc_MAPKK_Byr1_like Ca 99.5 3E-14 6.6E-19 91.2 7.3 103 4-115 162-266 (284)
182 cd05592 STKc_nPKC_theta_delta 99.5 1.3E-14 2.7E-19 94.4 5.6 90 4-113 156-246 (316)
183 KOG0599 Phosphorylase kinase g 99.5 3E-15 6.5E-20 93.5 2.5 98 3-114 181-282 (411)
184 cd07863 STKc_CDK4 Catalytic do 99.5 1.8E-14 3.9E-19 92.3 6.2 44 4-49 167-210 (288)
185 cd05584 STKc_p70S6K Catalytic 99.5 1.5E-14 3.3E-19 94.3 5.9 91 4-114 160-255 (323)
186 cd07849 STKc_ERK1_2_like Catal 99.5 4.7E-14 1E-18 92.4 8.2 118 4-128 169-307 (336)
187 cd05607 STKc_GRK7 Catalytic do 99.5 9.7E-15 2.1E-19 93.2 4.9 95 4-113 154-248 (277)
188 cd05097 PTKc_DDR_like Catalyti 99.5 4.2E-14 9.1E-19 91.0 7.6 98 6-118 193-295 (295)
189 PTZ00266 NIMA-related protein 99.5 1.3E-14 2.8E-19 104.6 5.7 99 4-119 201-301 (1021)
190 cd05612 STKc_PRKX_like Catalyt 99.5 1.3E-14 2.8E-19 93.3 5.1 91 4-114 158-253 (291)
191 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.5 1.5E-14 3.3E-19 91.8 5.3 97 5-117 163-268 (269)
192 cd05591 STKc_nPKC_epsilon Cata 99.5 1.2E-14 2.7E-19 94.6 4.9 92 3-114 155-253 (321)
193 cd08225 STKc_Nek5 Catalytic do 99.5 2.4E-14 5.1E-19 90.2 6.0 91 5-114 163-253 (257)
194 cd06641 STKc_MST3 Catalytic do 99.5 4.4E-14 9.6E-19 90.1 7.2 92 4-114 161-252 (277)
195 cd07876 STKc_JNK2 Catalytic do 99.5 1E-13 2.2E-18 91.6 9.1 44 4-49 182-225 (359)
196 cd05616 STKc_cPKC_beta Catalyt 99.5 1.3E-14 2.9E-19 94.5 4.8 87 3-109 160-246 (323)
197 KOG1025 Epidermal growth facto 99.5 1.3E-14 2.7E-19 101.7 4.9 96 8-122 864-960 (1177)
198 cd06648 STKc_PAK_II Catalytic 99.5 2.5E-14 5.5E-19 91.7 6.0 92 4-114 175-268 (285)
199 cd05608 STKc_GRK1 Catalytic do 99.5 5E-14 1.1E-18 90.1 7.1 95 4-114 157-256 (280)
200 cd07868 STKc_CDK8 Catalytic do 99.5 3.1E-14 6.8E-19 92.4 6.2 46 3-49 174-219 (317)
201 cd06643 STKc_SLK Catalytic dom 99.5 6.4E-14 1.4E-18 89.6 7.5 95 4-114 163-261 (282)
202 KOG0593 Predicted protein kina 99.5 2.9E-14 6.2E-19 90.1 5.7 112 2-114 159-283 (396)
203 cd06917 STKc_NAK1_like Catalyt 99.5 6E-14 1.3E-18 89.4 7.4 94 4-114 161-254 (277)
204 PHA03211 serine/threonine kina 99.5 1E-13 2.2E-18 94.1 8.8 42 4-47 322-363 (461)
205 cd05617 STKc_aPKC_zeta Catalyt 99.5 4.1E-14 8.9E-19 92.4 6.6 94 3-109 155-248 (327)
206 cd05594 STKc_PKB_alpha Catalyt 99.5 4.4E-15 9.6E-20 96.8 2.1 92 3-114 155-251 (325)
207 cd05605 STKc_GRK4_like Catalyt 99.5 1E-13 2.2E-18 88.9 8.3 95 4-114 161-260 (285)
208 smart00219 TyrKc Tyrosine kina 99.5 4.1E-14 9E-19 89.0 6.3 92 6-116 166-258 (258)
209 PTZ00036 glycogen synthase kin 99.5 3.9E-14 8.4E-19 95.9 6.5 110 3-119 229-357 (440)
210 cd07878 STKc_p38beta_MAPK11 Ca 99.5 6.4E-14 1.4E-18 92.0 7.3 46 3-49 174-219 (343)
211 KOG3653 Transforming growth fa 99.5 1.7E-14 3.7E-19 95.3 4.5 119 4-124 378-508 (534)
212 cd05614 STKc_MSK2_N N-terminal 99.5 3.7E-14 8.1E-19 92.7 6.1 96 4-114 166-266 (332)
213 cd05037 PTK_Jak_rpt1 Pseudokin 99.5 6.5E-14 1.4E-18 88.3 7.0 94 5-117 165-259 (259)
214 KOG0661 MAPK related serine/th 99.5 3E-14 6.6E-19 94.3 5.6 106 2-114 167-290 (538)
215 cd08216 PK_STRAD Pseudokinase 99.5 5.2E-14 1.1E-18 91.2 6.6 105 5-114 169-294 (314)
216 cd06638 STKc_myosinIIIA Cataly 99.5 1E-13 2.2E-18 88.8 7.8 95 4-115 184-283 (286)
217 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.5 6.9E-14 1.5E-18 89.2 7.0 93 5-117 181-274 (274)
218 cd05038 PTKc_Jak_rpt2 Catalyti 99.5 5.7E-14 1.2E-18 89.7 6.6 105 6-119 174-283 (284)
219 cd06629 STKc_MAPKKK_Bck1_like 99.5 3.2E-14 6.9E-19 90.4 5.4 99 4-114 170-268 (272)
220 cd06646 STKc_MAP4K5 Catalytic 99.5 3E-14 6.5E-19 90.3 5.3 99 4-115 166-265 (267)
221 cd06607 STKc_TAO Catalytic dom 99.5 4.8E-14 1E-18 91.2 6.1 95 4-114 171-266 (307)
222 cd06658 STKc_PAK5 Catalytic do 99.5 3.7E-14 7.9E-19 91.3 5.5 92 4-114 178-271 (292)
223 cd07874 STKc_JNK3 Catalytic do 99.5 8.3E-14 1.8E-18 91.8 7.2 44 4-49 178-221 (355)
224 PTZ00426 cAMP-dependent protei 99.5 2.5E-14 5.4E-19 93.9 4.7 92 3-114 187-283 (340)
225 cd06622 PKc_MAPKK_PBS2_like Ca 99.5 1.6E-13 3.4E-18 87.9 8.3 97 4-114 161-261 (286)
226 PHA03207 serine/threonine kina 99.5 1.4E-13 3E-18 92.0 8.3 45 4-50 247-291 (392)
227 cd06634 STKc_TAO2 Catalytic do 99.5 7.2E-14 1.6E-18 90.5 6.5 96 4-115 171-267 (308)
228 cd05602 STKc_SGK1 Catalytic do 99.5 1.5E-14 3.3E-19 94.3 3.4 90 3-112 155-244 (325)
229 cd06659 STKc_PAK6 Catalytic do 99.5 1.4E-13 3.1E-18 88.7 7.8 92 4-114 177-270 (297)
230 cd05587 STKc_cPKC Catalytic do 99.5 3.4E-14 7.4E-19 92.6 4.9 86 4-109 161-246 (324)
231 cd05574 STKc_phototropin_like 99.5 5.5E-14 1.2E-18 91.2 5.8 93 4-114 192-288 (316)
232 cd05628 STKc_NDR1 Catalytic do 99.5 9.9E-14 2.2E-18 91.8 7.1 95 4-114 196-292 (363)
233 KOG0616 cAMP-dependent protein 99.5 2.9E-14 6.2E-19 89.6 4.1 84 3-106 200-283 (355)
234 cd08222 STKc_Nek11 Catalytic d 99.5 7.8E-14 1.7E-18 88.1 6.2 92 4-114 165-256 (260)
235 cd06605 PKc_MAPKK Catalytic do 99.5 1.7E-13 3.7E-18 86.7 7.8 98 4-114 159-256 (265)
236 PLN00181 protein SPA1-RELATED; 99.5 3.1E-14 6.7E-19 102.3 4.8 90 4-114 175-264 (793)
237 cd06626 STKc_MEKK4 Catalytic d 99.5 1.5E-13 3.2E-18 86.9 7.4 95 4-114 163-260 (264)
238 cd06635 STKc_TAO1 Catalytic do 99.5 9.9E-14 2.1E-18 90.2 6.7 97 4-116 181-278 (317)
239 KOG0605 NDR and related serine 99.5 3.9E-14 8.5E-19 94.7 4.8 95 3-114 347-444 (550)
240 cd05630 STKc_GRK6 Catalytic do 99.5 8.7E-14 1.9E-18 89.2 6.3 95 4-114 161-260 (285)
241 cd07867 STKc_CDC2L6 Catalytic 99.5 1.5E-13 3.2E-18 89.2 7.4 45 4-49 175-219 (317)
242 cd08530 STKc_CNK2-like Catalyt 99.5 9.1E-14 2E-18 87.5 6.3 91 5-114 162-252 (256)
243 cd06639 STKc_myosinIIIB Cataly 99.5 1.1E-13 2.4E-18 88.8 6.7 94 4-114 188-286 (291)
244 cd08215 STKc_Nek Catalytic dom 99.5 1E-13 2.2E-18 87.2 6.4 92 4-114 163-254 (258)
245 cd06613 STKc_MAP4K3_like Catal 99.5 1.1E-13 2.4E-18 87.4 6.6 96 4-114 161-259 (262)
246 KOG2052 Activin A type IB rece 99.5 6.7E-14 1.4E-18 92.1 5.6 115 3-123 379-507 (513)
247 cd06632 STKc_MEKK1_plant Catal 99.5 8.7E-14 1.9E-18 87.6 6.1 93 4-114 161-254 (258)
248 KOG1989 ARK protein kinase fam 99.5 4.4E-14 9.4E-19 98.7 5.0 96 7-122 218-314 (738)
249 cd08226 PK_STRAD_beta Pseudoki 99.5 1.3E-13 2.8E-18 90.1 6.9 44 6-49 170-213 (328)
250 cd05573 STKc_ROCK_NDR_like Cat 99.5 3.3E-14 7.1E-19 93.4 4.2 92 4-114 190-284 (350)
251 cd06630 STKc_MEKK1 Catalytic d 99.5 2E-13 4.4E-18 86.5 7.6 96 4-114 168-263 (268)
252 cd06614 STKc_PAK Catalytic dom 99.5 1E-13 2.2E-18 88.8 6.3 92 5-114 177-269 (286)
253 cd07831 STKc_MOK Catalytic dom 99.5 1.2E-13 2.6E-18 88.1 6.5 104 4-114 158-278 (282)
254 cd06608 STKc_myosinIII_like Ca 99.5 1.1E-13 2.3E-18 87.9 6.3 96 4-114 173-271 (275)
255 cd07838 STKc_CDK4_6_like Catal 99.5 2.6E-13 5.7E-18 86.7 8.1 102 5-114 167-283 (287)
256 cd06645 STKc_MAP4K3 Catalytic 99.5 1.2E-13 2.7E-18 87.5 6.5 95 4-114 166-264 (267)
257 KOG0580 Serine/threonine prote 99.5 7.5E-14 1.6E-18 85.4 5.2 93 2-114 180-272 (281)
258 cd06656 STKc_PAK3 Catalytic do 99.5 1E-13 2.2E-18 89.4 6.0 93 4-114 175-268 (297)
259 KOG0595 Serine/threonine-prote 99.5 3.3E-14 7.2E-19 92.4 3.7 48 2-51 172-219 (429)
260 KOG1094 Discoidin domain recep 99.5 1.4E-14 3E-19 98.3 2.0 101 7-119 702-804 (807)
261 cd05575 STKc_SGK Catalytic dom 99.5 4.2E-14 9.2E-19 92.1 4.2 87 4-110 156-242 (323)
262 cd06644 STKc_STK10_LOK Catalyt 99.5 3.2E-13 6.8E-18 86.8 8.0 95 4-114 170-268 (292)
263 KOG0603 Ribosomal protein S6 k 99.5 8.5E-14 1.9E-18 94.7 5.4 89 5-114 474-562 (612)
264 cd06652 STKc_MEKK2 Catalytic d 99.5 1.3E-13 2.8E-18 87.4 5.9 92 4-114 169-260 (265)
265 cd05046 PTK_CCK4 Pseudokinase 99.5 2.3E-13 5E-18 86.6 7.1 95 5-118 179-275 (275)
266 cd06633 STKc_TAO3 Catalytic do 99.5 1.8E-13 4E-18 88.8 6.7 96 3-114 176-272 (313)
267 cd05632 STKc_GRK5 Catalytic do 99.5 5.4E-13 1.2E-17 85.5 8.8 95 4-114 161-260 (285)
268 cd05122 PKc_STE Catalytic doma 99.5 1.5E-13 3.2E-18 86.1 6.0 92 4-114 157-250 (253)
269 KOG0690 Serine/threonine prote 99.5 8.1E-14 1.7E-18 89.1 4.7 88 1-108 325-412 (516)
270 cd05586 STKc_Sck1_like Catalyt 99.5 1.8E-14 3.8E-19 94.2 1.8 93 3-114 155-252 (330)
271 cd05118 STKc_CMGC Catalytic do 99.5 3.2E-13 7E-18 86.1 7.5 104 4-114 158-279 (283)
272 cd06621 PKc_MAPKK_Pek1_like Ca 99.5 3.2E-13 7E-18 86.6 7.5 103 4-114 163-265 (287)
273 KOG0195 Integrin-linked kinase 99.5 8.3E-14 1.8E-18 87.3 4.5 98 7-120 349-447 (448)
274 cd06611 STKc_SLK_like Catalyti 99.5 1.4E-13 3E-18 87.9 5.8 94 4-114 163-261 (280)
275 cd06647 STKc_PAK_I Catalytic d 99.5 1.9E-13 4E-18 88.0 6.4 93 4-114 175-268 (293)
276 cd07869 STKc_PFTAIRE1 Catalyti 99.5 7.6E-14 1.6E-18 90.2 4.5 45 4-49 163-207 (303)
277 PHA03390 pk1 serine/threonine- 99.5 3.2E-13 7E-18 85.9 7.2 95 4-114 166-261 (267)
278 cd06615 PKc_MEK Catalytic doma 99.5 2.8E-13 6.1E-18 87.8 7.0 43 4-48 158-200 (308)
279 KOG4717 Serine/threonine prote 99.5 1.4E-13 3.1E-18 92.7 5.7 102 1-122 175-279 (864)
280 cd06623 PKc_MAPKK_plant_like C 99.5 1.9E-13 4.1E-18 86.4 6.0 95 4-114 160-255 (264)
281 KOG0986 G protein-coupled rece 99.5 8.3E-14 1.8E-18 92.1 4.4 92 3-110 345-436 (591)
282 cd07858 STKc_TEY_MAPK_plant Ca 99.5 1.2E-13 2.6E-18 90.5 5.2 119 4-127 168-305 (337)
283 cd07854 STKc_MAPK4_6 Catalytic 99.5 1.6E-13 3.5E-18 90.1 5.9 44 5-49 179-222 (342)
284 cd07852 STKc_MAPK15 Catalytic 99.5 1.4E-13 3.1E-18 90.1 5.6 117 4-122 172-304 (337)
285 cd07833 STKc_CDKL Catalytic do 99.5 2.2E-13 4.8E-18 87.2 6.3 44 4-49 161-205 (288)
286 cd07871 STKc_PCTAIRE3 Catalyti 99.5 2.2E-13 4.9E-18 87.4 6.3 45 4-49 163-207 (288)
287 cd07834 STKc_MAPK Catalytic do 99.4 1E-12 2.2E-17 85.8 9.2 111 4-122 166-298 (330)
288 cd06617 PKc_MKK3_6 Catalytic d 99.4 4.4E-13 9.6E-18 85.6 7.3 95 4-114 163-260 (283)
289 cd07866 STKc_BUR1 Catalytic do 99.4 6.5E-14 1.4E-18 90.5 3.5 110 4-114 186-307 (311)
290 cd07855 STKc_ERK5 Catalytic do 99.4 1.1E-12 2.5E-17 85.8 9.3 120 3-124 170-305 (334)
291 PRK13184 pknD serine/threonine 99.4 3.3E-13 7.1E-18 97.0 7.2 102 4-122 191-293 (932)
292 cd07853 STKc_NLK Catalytic dom 99.4 4.5E-13 9.7E-18 88.9 7.4 46 4-50 164-209 (372)
293 cd05086 PTKc_Aatyk2 Catalytic 99.4 9.8E-13 2.1E-17 83.6 8.6 97 4-117 161-267 (268)
294 cd05582 STKc_RSK_N N-terminal 99.4 3E-14 6.5E-19 92.6 1.8 88 4-111 158-245 (318)
295 cd05596 STKc_ROCK Catalytic do 99.4 2E-13 4.3E-18 90.6 5.6 96 3-114 202-303 (370)
296 KOG0032 Ca2+/calmodulin-depend 99.4 1.8E-13 3.9E-18 90.7 5.2 94 2-114 196-292 (382)
297 KOG0696 Serine/threonine prote 99.4 1.8E-13 4E-18 90.0 5.1 88 2-109 508-595 (683)
298 cd05609 STKc_MAST Catalytic do 99.4 4.9E-13 1.1E-17 86.5 7.2 96 4-117 176-272 (305)
299 cd05603 STKc_SGK2 Catalytic do 99.4 9.3E-14 2E-18 90.5 3.8 87 4-110 156-242 (321)
300 cd05615 STKc_cPKC_alpha Cataly 99.4 2.1E-13 4.6E-18 88.9 5.4 86 4-109 161-246 (323)
301 cd05604 STKc_SGK3 Catalytic do 99.4 4.3E-14 9.2E-19 92.2 2.2 87 4-110 156-242 (325)
302 cd06618 PKc_MKK7 Catalytic dom 99.4 8.4E-13 1.8E-17 85.0 8.1 96 5-114 175-272 (296)
303 cd07839 STKc_CDK5 Catalytic do 99.4 2.2E-13 4.7E-18 87.1 5.2 44 4-48 159-202 (284)
304 cd07861 STKc_CDK1_euk Catalyti 99.4 1.3E-13 2.8E-18 88.2 4.1 44 5-49 162-205 (285)
305 cd05042 PTKc_Aatyk Catalytic d 99.4 2.8E-13 6.2E-18 86.0 5.6 99 6-117 164-268 (269)
306 cd06606 STKc_MAPKKK Catalytic 99.4 9.5E-13 2.1E-17 82.7 7.9 94 4-114 163-256 (260)
307 cd07872 STKc_PCTAIRE2 Catalyti 99.4 6.1E-13 1.3E-17 86.2 7.1 112 4-122 164-295 (309)
308 PHA03210 serine/threonine kina 99.4 5.4E-13 1.2E-17 91.7 7.1 41 4-46 328-368 (501)
309 KOG0695 Serine/threonine prote 99.4 3.3E-13 7.1E-18 86.9 5.5 96 2-109 409-504 (593)
310 cd07835 STKc_CDK1_like Catalyt 99.4 1.9E-13 4.2E-18 87.3 4.5 44 5-49 160-203 (283)
311 cd05611 STKc_Rim15_like Cataly 99.4 6.9E-13 1.5E-17 83.8 6.9 93 4-115 153-248 (260)
312 cd05599 STKc_NDR_like Catalyti 99.4 4.8E-13 1E-17 88.5 6.2 92 4-114 199-295 (364)
313 cd06653 STKc_MEKK3_like_1 Cata 99.4 5.7E-13 1.2E-17 84.4 6.3 92 4-114 169-260 (264)
314 cd05633 STKc_GRK3 Catalytic do 99.4 6.7E-13 1.5E-17 84.9 6.5 95 4-114 155-254 (279)
315 cd07847 STKc_CDKL1_4 Catalytic 99.4 2E-13 4.3E-18 87.3 4.0 108 4-114 160-282 (286)
316 cd07850 STKc_JNK Catalytic dom 99.4 7.5E-13 1.6E-17 87.3 6.8 44 4-49 177-220 (353)
317 cd05625 STKc_LATS1 Catalytic d 99.4 5.5E-13 1.2E-17 88.8 6.2 44 4-49 208-251 (382)
318 cd07840 STKc_CDK9_like Catalyt 99.4 9.5E-13 2.1E-17 84.1 7.1 103 5-114 162-283 (287)
319 PF00069 Pkinase: Protein kina 99.4 3.2E-13 6.9E-18 85.2 4.9 100 3-114 157-256 (260)
320 cd07879 STKc_p38delta_MAPK13 C 99.4 2.6E-13 5.7E-18 89.1 4.6 112 4-122 174-306 (342)
321 cd06657 STKc_PAK4 Catalytic do 99.4 5.6E-13 1.2E-17 85.8 6.0 94 4-114 176-269 (292)
322 cd06627 STKc_Cdc7_like Catalyt 99.4 5.6E-13 1.2E-17 83.7 5.9 92 4-114 159-250 (254)
323 PTZ00024 cyclin-dependent prot 99.4 6.6E-13 1.4E-17 86.9 6.4 103 5-114 194-312 (335)
324 cd05598 STKc_LATS Catalytic do 99.4 2.6E-13 5.5E-18 90.2 4.1 45 3-49 203-247 (376)
325 cd05572 STKc_cGK_PKG Catalytic 99.4 1.7E-12 3.7E-17 82.1 7.6 95 4-114 152-251 (262)
326 cd07851 STKc_p38 Catalytic dom 99.4 1.1E-12 2.4E-17 86.2 6.8 110 3-119 174-304 (343)
327 cd07832 STKc_CCRK Catalytic do 99.4 6.6E-13 1.4E-17 84.9 5.4 104 4-114 160-281 (286)
328 cd07865 STKc_CDK9 Catalytic do 99.4 1.7E-12 3.8E-17 83.8 7.3 44 5-49 184-227 (310)
329 cd07830 STKc_MAK_like Catalyti 99.4 1.1E-12 2.4E-17 83.8 6.3 110 4-114 158-279 (283)
330 cd05606 STKc_beta_ARK Catalyti 99.4 1.7E-12 3.6E-17 83.0 7.0 95 4-114 155-254 (278)
331 cd07846 STKc_CDKL2_3 Catalytic 99.4 5.5E-13 1.2E-17 85.3 4.8 44 4-48 160-203 (286)
332 cd05601 STKc_CRIK Catalytic do 99.4 1.3E-13 2.9E-18 90.0 1.9 94 4-114 163-262 (330)
333 cd05629 STKc_NDR_like_fungal C 99.4 3.7E-13 8E-18 89.5 4.0 44 4-49 208-251 (377)
334 smart00220 S_TKc Serine/Threon 99.4 1.7E-12 3.7E-17 80.8 6.7 93 4-114 146-240 (244)
335 KOG0584 Serine/threonine prote 99.4 9.2E-13 2E-17 89.7 5.5 92 3-114 203-295 (632)
336 cd05623 STKc_MRCK_alpha Cataly 99.4 1.4E-12 3E-17 85.4 6.2 97 4-114 163-265 (332)
337 cd07842 STKc_CDK8_like Catalyt 99.4 3.3E-12 7E-17 82.8 7.6 46 4-50 175-220 (316)
338 cd07873 STKc_PCTAIRE1 Catalyti 99.4 1.1E-12 2.5E-17 84.6 5.5 45 4-49 164-208 (301)
339 cd05583 STKc_MSK_N N-terminal 99.4 2.4E-12 5.1E-17 82.6 6.8 101 4-118 166-266 (288)
340 cd05578 STKc_Yank1 Catalytic d 99.4 1.4E-12 3.1E-17 82.3 5.5 93 4-113 159-253 (258)
341 cd07841 STKc_CDK7 Catalytic do 99.4 4.4E-12 9.5E-17 81.7 7.7 103 5-114 163-281 (298)
342 cd07860 STKc_CDK2_3 Catalytic 99.4 4.7E-12 1E-16 81.0 7.8 44 5-49 161-204 (284)
343 cd05577 STKc_GRK Catalytic dom 99.4 3.9E-12 8.5E-17 81.2 7.4 95 4-114 154-253 (277)
344 KOG0604 MAP kinase-activated p 99.4 1.5E-12 3.3E-17 82.4 5.2 97 2-114 221-321 (400)
345 cd05580 STKc_PKA Catalytic dom 99.4 2.1E-12 4.5E-17 83.0 6.0 91 4-114 158-253 (290)
346 KOG0614 cGMP-dependent protein 99.3 8.4E-13 1.8E-17 88.7 4.0 87 3-108 578-665 (732)
347 cd07877 STKc_p38alpha_MAPK14 C 99.3 9.1E-12 2E-16 82.0 8.8 44 4-48 177-220 (345)
348 cd07829 STKc_CDK_like Catalyti 99.3 3.7E-12 8E-17 81.3 6.7 103 5-114 159-278 (282)
349 cd07843 STKc_CDC2L1 Catalytic 99.3 2.5E-12 5.4E-17 82.7 5.9 44 5-49 167-210 (293)
350 cd05579 STKc_MAST_like Catalyt 99.3 1.9E-12 4.1E-17 81.8 5.3 95 5-117 162-256 (265)
351 cd05597 STKc_DMPK_like Catalyt 99.3 3.3E-12 7.1E-17 83.6 6.5 97 4-114 163-265 (331)
352 cd07845 STKc_CDK10 Catalytic d 99.3 3.5E-12 7.6E-17 82.6 6.5 44 5-49 169-212 (309)
353 cd07837 STKc_CdkB_plant Cataly 99.3 5.5E-12 1.2E-16 81.1 7.4 103 5-114 172-290 (295)
354 cd05123 STKc_AGC Catalytic dom 99.3 2.9E-12 6.3E-17 80.4 5.9 87 4-110 153-239 (250)
355 cd05581 STKc_PDK1 Catalytic do 99.3 2.3E-12 5E-17 82.1 5.4 91 4-114 182-276 (280)
356 cd07857 STKc_MPK1 Catalytic do 99.3 6.3E-12 1.4E-16 82.3 7.5 44 4-48 169-212 (332)
357 KOG1035 eIF-2alpha kinase GCN2 99.3 1.5E-12 3.3E-17 94.3 4.9 97 2-114 773-870 (1351)
358 cd07864 STKc_CDK12 Catalytic d 99.3 3E-12 6.5E-17 82.5 5.7 103 5-114 178-298 (302)
359 KOG1006 Mitogen-activated prot 99.3 9.3E-13 2E-17 82.1 3.1 99 5-114 228-326 (361)
360 cd07836 STKc_Pho85 Catalytic d 99.3 2.5E-12 5.4E-17 82.2 5.1 45 4-49 160-204 (284)
361 KOG0671 LAMMER dual specificit 99.3 2.2E-13 4.8E-18 88.0 0.2 46 3-50 268-313 (415)
362 KOG0587 Traf2- and Nck-interac 99.3 9.3E-13 2E-17 92.7 3.1 97 3-114 182-281 (953)
363 cd05621 STKc_ROCK2 Catalytic d 99.3 2.6E-12 5.7E-17 85.3 5.0 47 3-49 202-250 (370)
364 cd05627 STKc_NDR2 Catalytic do 99.3 9.7E-13 2.1E-17 87.0 2.8 44 4-49 196-239 (360)
365 cd05576 STKc_RPK118_like Catal 99.3 4E-12 8.7E-17 79.5 5.3 82 5-110 143-224 (237)
366 cd05622 STKc_ROCK1 Catalytic d 99.3 7.8E-12 1.7E-16 83.1 6.9 47 3-49 202-250 (371)
367 PLN00009 cyclin-dependent kina 99.3 1.1E-11 2.4E-16 79.7 7.3 44 5-49 164-207 (294)
368 cd07856 STKc_Sty1_Hog1 Catalyt 99.3 1.1E-11 2.4E-16 81.1 7.1 45 4-49 165-209 (328)
369 cd05613 STKc_MSK1_N N-terminal 99.3 1.5E-11 3.2E-16 79.0 7.1 97 4-114 166-267 (290)
370 cd07870 STKc_PFTAIRE2 Catalyti 99.3 1.3E-11 2.8E-16 79.3 6.7 44 5-49 164-207 (291)
371 KOG0600 Cdc2-related protein k 99.3 4.8E-12 1.1E-16 84.6 4.7 106 2-114 277-399 (560)
372 KOG0585 Ca2+/calmodulin-depend 99.3 3.4E-12 7.4E-17 84.9 3.9 94 3-114 274-371 (576)
373 KOG0659 Cdk activating kinase 99.3 1.8E-11 3.8E-16 76.3 6.1 103 5-114 162-280 (318)
374 cd07844 STKc_PCTAIRE_like Cata 99.3 1.4E-11 2.9E-16 79.2 5.5 44 5-49 164-207 (291)
375 KOG0663 Protein kinase PITSLRE 99.2 4.9E-11 1.1E-15 76.6 7.3 48 1-49 234-281 (419)
376 cd05624 STKc_MRCK_beta Catalyt 99.2 1.7E-11 3.6E-16 80.3 5.3 46 4-49 163-211 (331)
377 cd07880 STKc_p38gamma_MAPK12 C 99.2 5.8E-11 1.3E-15 78.1 7.6 45 4-49 175-219 (343)
378 KOG0667 Dual-specificity tyros 99.2 4.1E-11 8.9E-16 82.0 5.7 43 6-50 350-392 (586)
379 KOG0594 Protein kinase PCTAIRE 99.1 7.7E-11 1.7E-15 75.6 4.8 111 2-119 178-308 (323)
380 PLN03225 Serine/threonine-prot 99.1 9.7E-11 2.1E-15 81.6 5.6 110 3-114 316-449 (566)
381 KOG0586 Serine/threonine prote 99.1 5.8E-11 1.3E-15 80.9 3.7 93 2-114 212-305 (596)
382 KOG0658 Glycogen synthase kina 99.1 7.5E-11 1.6E-15 76.1 4.0 46 5-51 186-231 (364)
383 KOG1151 Tousled-like protein k 99.1 5.5E-11 1.2E-15 79.3 3.3 97 3-114 639-740 (775)
384 KOG1023 Natriuretic peptide re 99.1 3.4E-10 7.3E-15 76.7 5.3 106 9-122 116-227 (484)
385 KOG1027 Serine/threonine prote 99.1 4.9E-11 1.1E-15 83.9 1.3 93 2-114 672-766 (903)
386 KOG0611 Predicted serine/threo 99.0 4.2E-10 9.1E-15 74.4 5.0 92 2-114 210-302 (668)
387 KOG1290 Serine/threonine prote 99.0 8.4E-10 1.8E-14 74.1 6.1 42 5-48 412-453 (590)
388 KOG0612 Rho-associated, coiled 99.0 3.3E-10 7.2E-15 82.2 4.2 95 2-114 234-337 (1317)
389 KOG0576 Mitogen-activated prot 99.0 6.7E-10 1.4E-14 77.0 4.2 99 3-114 171-270 (829)
390 KOG0608 Warts/lats-like serine 99.0 1.3E-09 2.8E-14 75.7 5.3 81 3-92 830-910 (1034)
391 KOG0607 MAP kinase-interacting 98.9 3.3E-09 7.1E-14 68.3 4.5 105 2-114 244-360 (463)
392 KOG0669 Cyclin T-dependent kin 98.8 9E-09 2E-13 64.4 5.2 106 5-114 189-314 (376)
393 KOG0666 Cyclin C-dependent kin 98.8 1.8E-08 3.8E-13 64.8 5.3 46 4-50 199-244 (438)
394 KOG0665 Jun-N-terminal kinase 98.7 2.6E-08 5.7E-13 63.9 5.3 45 1-47 174-218 (369)
395 KOG4250 TANK binding protein k 98.7 5.3E-09 1.2E-13 72.8 2.3 51 1-52 180-230 (732)
396 KOG0670 U4/U6-associated splic 98.7 5.1E-09 1.1E-13 71.2 1.9 41 7-49 598-638 (752)
397 KOG1033 eIF-2alpha kinase PEK/ 98.7 1.4E-08 3E-13 68.7 3.6 38 2-41 420-457 (516)
398 cd00180 PKc Catalytic domain o 98.7 3.9E-08 8.4E-13 59.7 4.4 61 4-115 153-214 (215)
399 KOG4236 Serine/threonine prote 98.7 1.7E-09 3.6E-14 73.8 -1.8 93 3-113 725-817 (888)
400 KOG1167 Serine/threonine prote 98.6 1.1E-08 2.4E-13 67.4 1.2 46 4-50 237-282 (418)
401 KOG0590 Checkpoint kinase and 98.5 5.6E-08 1.2E-12 68.4 2.4 110 2-122 482-594 (601)
402 KOG0984 Mitogen-activated prot 98.5 6.8E-08 1.5E-12 58.9 2.2 46 5-50 209-256 (282)
403 KOG0664 Nemo-like MAPK-related 98.4 1.7E-07 3.7E-12 59.5 2.8 48 3-51 216-263 (449)
404 PLN03224 probable serine/threo 98.4 1.2E-06 2.6E-11 60.7 6.7 101 6-114 372-499 (507)
405 KOG0606 Microtubule-associated 98.3 6.4E-07 1.4E-11 65.6 4.0 88 3-108 217-305 (1205)
406 KOG4158 BRPK/PTEN-induced prot 98.3 3E-06 6.6E-11 56.6 5.9 91 6-112 413-507 (598)
407 KOG1240 Protein kinase contain 98.2 1.3E-06 2.8E-11 64.5 2.8 88 7-115 190-291 (1431)
408 KOG0603 Ribosomal protein S6 k 98.1 1.8E-06 3.9E-11 59.9 2.5 40 5-48 154-193 (612)
409 smart00221 STYKc Protein kinas 98.1 3.2E-06 7E-11 52.0 2.9 44 4-48 159-202 (225)
410 KOG0668 Casein kinase II, alph 97.9 1E-05 2.2E-10 50.4 3.1 43 6-49 194-236 (338)
411 KOG1152 Signal transduction se 97.9 2.5E-06 5.3E-11 59.2 -0.4 44 3-48 727-771 (772)
412 KOG0662 Cyclin-dependent kinas 97.8 7.6E-05 1.7E-09 45.0 5.3 42 4-46 161-202 (292)
413 KOG1345 Serine/threonine kinas 97.5 8.7E-05 1.9E-09 47.5 2.2 92 8-112 184-281 (378)
414 KOG0606 Microtubule-associated 97.4 0.0003 6.4E-09 52.4 4.7 88 4-110 995-1084(1205)
415 COG0515 SPS1 Serine/threonine 97.4 0.0012 2.6E-08 42.5 6.9 48 2-49 166-214 (384)
416 PF14531 Kinase-like: Kinase-l 97.2 0.00023 4.9E-09 46.1 2.2 43 7-49 205-253 (288)
417 KOG0590 Checkpoint kinase and 96.3 0.0024 5.1E-08 45.7 1.6 96 4-114 188-285 (601)
418 KOG1164 Casein kinase (serine/ 96.2 0.053 1.1E-06 35.9 7.8 104 4-122 197-300 (322)
419 KOG2137 Protein kinase [Signal 95.3 0.0072 1.6E-07 43.4 1.0 90 8-113 173-263 (700)
420 KOG1266 Protein kinase [Signal 95.1 0.057 1.2E-06 36.1 4.5 36 6-43 244-279 (458)
421 COG4248 Uncharacterized protei 93.8 0.46 1E-05 33.3 6.6 48 4-51 176-227 (637)
422 KOG1165 Casein kinase (serine/ 92.0 0.41 8.9E-06 32.3 4.3 49 3-53 195-243 (449)
423 KOG1093 Predicted protein kina 85.7 0.53 1.1E-05 33.9 1.6 19 25-43 110-128 (725)
424 KOG0601 Cyclin-dependent kinas 82.7 2.4 5.3E-05 30.4 3.8 37 5-44 289-325 (524)
425 KOG0576 Mitogen-activated prot 68.9 2.7 5.8E-05 31.2 1.1 42 2-45 388-429 (829)
426 cd00059 FH Forkhead (FH), also 67.9 5.4 0.00012 20.8 1.8 24 98-121 13-36 (78)
427 KOG1163 Casein kinase (serine/ 62.0 2.6 5.7E-05 27.4 0.0 49 3-53 180-228 (341)
428 smart00339 FH FORKHEAD. FORKHE 57.9 12 0.00027 19.9 2.2 24 98-121 13-36 (89)
429 PF08247 ENOD40: ENOD40 protei 56.5 2.5 5.4E-05 13.4 -0.4 7 96-102 2-8 (12)
430 KOG1166 Mitotic checkpoint ser 51.6 41 0.0009 26.6 4.6 40 3-44 862-901 (974)
431 PF09713 A_thal_3526: Plant pr 47.6 15 0.00033 17.7 1.3 23 93-119 3-25 (54)
432 PF00250 Fork_head: Fork head 47.0 14 0.00031 20.0 1.4 22 98-119 13-34 (96)
433 PF02173 pKID: pKID domain; I 44.5 20 0.00043 16.1 1.3 15 105-119 18-32 (41)
434 smart00707 RPEL Repeat in Dros 40.9 20 0.00044 14.3 1.0 11 104-114 8-18 (26)
435 PF12263 DUF3611: Protein of u 39.1 60 0.0013 20.1 3.3 28 90-117 78-105 (183)
436 PF04301 DUF452: Protein of un 36.3 21 0.00045 22.6 1.0 19 104-122 137-155 (213)
437 PRK10359 lipopolysaccharide co 36.2 5.9 0.00013 25.3 -1.3 18 22-39 198-215 (232)
438 PRK12482 flagellar motor prote 35.4 63 0.0014 21.6 3.1 35 78-121 251-285 (287)
439 PF08926 DUF1908: Domain of un 33.3 51 0.0011 21.8 2.4 58 57-114 134-191 (282)
440 PF13220 DUF4028: Protein of u 33.0 60 0.0013 15.5 2.0 20 105-124 40-59 (65)
441 PF02755 RPEL: RPEL repeat; I 32.7 36 0.00078 13.6 1.1 10 105-114 9-18 (26)
442 cd07614 BAR_Endophilin_A2 The 31.0 75 0.0016 20.4 2.9 40 86-126 21-60 (223)
443 KOG3563 Forkhead/HNF-3-related 29.5 57 0.0012 22.6 2.3 30 90-119 177-206 (454)
444 PF14756 Pdase_C33_assoc: Pept 25.4 1.4E+02 0.0031 17.0 3.5 30 90-119 77-107 (147)
445 PF14769 CLAMP: Flagellar C1a 24.2 67 0.0014 17.5 1.6 25 105-129 34-58 (101)
446 PF08189 Meleagrin: Meleagrin/ 24.2 19 0.00042 15.6 -0.4 10 24-33 16-25 (39)
447 KOG3960 Myogenic helix-loop-he 23.6 1.4E+02 0.0031 19.6 3.1 27 88-114 133-159 (284)
448 TIGR00690 rpoZ DNA-directed RN 23.5 66 0.0014 15.6 1.4 8 106-113 2-9 (59)
449 PF01799 Fer2_2: [2Fe-2S] bind 22.1 1.3E+02 0.0028 15.5 2.3 19 99-119 41-59 (75)
450 TIGR01589 A_thal_3526 uncharac 21.2 76 0.0017 15.5 1.3 23 93-119 6-28 (57)
451 PF04433 SWIRM: SWIRM domain; 20.4 82 0.0018 16.4 1.5 28 90-117 37-64 (86)
452 PF08403 AA_permease_N: Amino 20.3 1.5E+02 0.0032 15.4 2.7 20 103-122 37-56 (74)
453 cd07615 BAR_Endophilin_A3 The 20.0 2E+02 0.0044 18.5 3.3 33 86-119 21-53 (223)
No 1
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.86 E-value=1.4e-21 Score=127.77 Aligned_cols=106 Identities=23% Similarity=0.246 Sum_probs=79.0
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
+...||..|||||++......|+.|+||||||+++||+++++.||....... ...........+..+...+
T Consensus 202 ~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~---------~~~~v~~~~~Rp~~p~~~~ 272 (362)
T KOG0192|consen 202 TSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ---------VASAVVVGGLRPPIPKECP 272 (362)
T ss_pred cCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH---------HHHHHHhcCCCCCCCccCC
Confidence 4578999999999993214689999999999999999999999998654311 1223333444444455444
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCC
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 123 (133)
. .+..++..||+.||+.||++.+|+..|+.+....
T Consensus 273 ~-------~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~ 307 (362)
T KOG0192|consen 273 P-------HLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHI 307 (362)
T ss_pred H-------HHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhh
Confidence 4 5556666699999999999999999998776543
No 2
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.85 E-value=6.9e-22 Score=132.78 Aligned_cols=97 Identities=20% Similarity=0.306 Sum_probs=76.4
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+|+||+.|||||++ ....-+.|+||||||||+|||+++..||.......+ ++....+.....+|...++
T Consensus 270 SFaGTVaWMAPEvI--rnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---------IwGVGsNsL~LpvPstcP~ 338 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVI--RNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---------IWGVGSNSLHLPVPSTCPD 338 (904)
T ss_pred hhhhhHhhhCHHHh--hcCCcccccceehhHHHHHHHHhcCCCccccchhee---------EEeccCCcccccCcccCch
Confidence 47899999999999 556788999999999999999999999987654432 4444455555556665555
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.+..|+.+||+..|..||+|.+|+..|+
T Consensus 339 -------GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 339 -------GFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred -------HHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 4444555699999999999999998776
No 3
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=1.6e-21 Score=126.69 Aligned_cols=93 Identities=23% Similarity=0.314 Sum_probs=71.0
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+++||++|||||++ ....|+.++||||+|++.+||.+|.+|+....+.. ..-.+.+..++...+..+.
T Consensus 170 tfvGTPfwMAPEVI--~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr----------vlflIpk~~PP~L~~~~S~ 237 (467)
T KOG0201|consen 170 TFVGTPFWMAPEVI--KQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR----------VLFLIPKSAPPRLDGDFSP 237 (467)
T ss_pred cccccccccchhhh--ccccccchhhhhhhhHHHHHHhcCCCCCcccCcce----------EEEeccCCCCCccccccCH
Confidence 68999999999999 56789999999999999999999999987655432 3333333444444444455
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+.+++ ..|+++||+.||++.++++
T Consensus 238 ~~kEFV-------~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 238 PFKEFV-------EACLDKNPEFRPSAKELLK 262 (467)
T ss_pred HHHHHH-------HHHhhcCcccCcCHHHHhh
Confidence 444444 4499999999999999975
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.84 E-value=3.2e-21 Score=127.43 Aligned_cols=97 Identities=29% Similarity=0.443 Sum_probs=79.6
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
.+.|.|||.+ ..+.|+.++||||||+++||+++ |+.||....... ....++.+.....|...++
T Consensus 367 PIkWtAPEa~--~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e----------v~~~le~GyRlp~P~~CP~--- 431 (468)
T KOG0197|consen 367 PIKWTAPEAL--NYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE----------VLELLERGYRLPRPEGCPD--- 431 (468)
T ss_pred CceecCHHHH--hhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH----------HHHHHhccCcCCCCCCCCH---
Confidence 3579999999 78899999999999999999998 666766543222 5666778888888887777
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..+|..||+.+|++||||+.+...|+++...
T Consensus 432 ----~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 432 ----EVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ----HHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 566677779999999999999999998887654
No 5
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=4.5e-21 Score=132.57 Aligned_cols=97 Identities=20% Similarity=0.332 Sum_probs=79.9
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
+.||+||.| ..++|+.++|||||||++||+++ |+.||.+..... ....+..+.-...|+..+.
T Consensus 669 IRWMppEsI--ly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E----------VIe~i~~g~lL~~Pe~CP~---- 732 (774)
T KOG1026|consen 669 IRWMPPESI--LYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE----------VIECIRAGQLLSCPENCPT---- 732 (774)
T ss_pred eecCCHHHh--hcCcccchhhhhhhhhhhhhhhccccCcccccchHH----------HHHHHHcCCcccCCCCCCH----
Confidence 689999999 78999999999999999999987 888988765433 4555555655666776666
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 123 (133)
.+..||..||+.+|++||++++|-..|++..+..
T Consensus 733 ---~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 733 ---EVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred ---HHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 6777888899999999999999999999887653
No 6
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=1.4e-20 Score=125.37 Aligned_cols=95 Identities=21% Similarity=0.324 Sum_probs=74.4
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-cccccCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-DLKRHGLV 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (133)
++.+||++|||||++ ....|..++||||+|++++||+.|++||.....-. .++....++. ....++..
T Consensus 427 ~TmVGTPYWMAPEVv--trk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr---------AlyLIa~ng~P~lk~~~kl 495 (550)
T KOG0578|consen 427 STMVGTPYWMAPEVV--TRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---------ALYLIATNGTPKLKNPEKL 495 (550)
T ss_pred ccccCCCCccchhhh--hhcccCccccchhhhhHHHHHhcCCCCccCCChHH---------HHHHHhhcCCCCcCCcccc
Confidence 468999999999999 67899999999999999999999999998644322 1222223332 33346667
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+..+.+++.+ ||+.|+.+|+++.++|.
T Consensus 496 S~~~kdFL~~-------cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 496 SPELKDFLDR-------CLVVDVEQRASAKELLE 522 (550)
T ss_pred CHHHHHHHHH-------HhhcchhcCCCHHHHhc
Confidence 7777777776 99999999999999986
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.83 E-value=2.4e-20 Score=119.01 Aligned_cols=99 Identities=21% Similarity=0.265 Sum_probs=76.2
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC-C
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL-V 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 80 (133)
.+++||..|||||.+ .+..|+.++||||+|++++|+..|+-|+....... ....+ +...+....++..|.. +
T Consensus 235 ~tfvGT~~YMsPERi--~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~----~~~~~-Ll~~Iv~~ppP~lP~~~f 307 (364)
T KOG0581|consen 235 NTFVGTSAYMSPERI--SGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY----LDIFE-LLCAIVDEPPPRLPEGEF 307 (364)
T ss_pred ccccccccccChhhh--cCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC----CCHHH-HHHHHhcCCCCCCCcccC
Confidence 478999999999999 67799999999999999999999999987652211 11122 2333444556666665 7
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
++++..++.. |+++||.+|+++.++++
T Consensus 308 S~ef~~FV~~-------CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 308 SPEFRSFVSC-------CLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CHHHHHHHHH-------HhcCCcccCCCHHHHhc
Confidence 7777776666 99999999999999985
No 8
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.5e-19 Score=118.13 Aligned_cols=104 Identities=23% Similarity=0.345 Sum_probs=75.6
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc-cCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR-HGLV 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 80 (133)
.+++||++|||||++..+...|+.|+||||||++.+|+.+|..||....+.. . +...+....+... ...-
T Consensus 188 ~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--------v-Ll~tLqn~pp~~~t~~~~ 258 (516)
T KOG0582|consen 188 NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--------V-LLLTLQNDPPTLLTSGLD 258 (516)
T ss_pred ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--------H-HHHHhcCCCCCcccccCC
Confidence 4689999999999965566789999999999999999999999998654421 1 2233333222111 1111
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+....+-+.+..++-.|+++||.+|||++++++
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 2333445557778888899999999999999985
No 9
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.79 E-value=6.5e-19 Score=105.47 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=68.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
.||..|+|||++ ....++.++||||+|++++++++|..|+....... .. ........ ....+... ...
T Consensus 65 ~g~~~y~aPE~~--~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~----~~----~~~~~~~~-~~~~~~~~-~~~ 132 (176)
T smart00750 65 RVDPYFMAPEVI--QGQSYTEKADIYSLGITLYEALDYELPYNEERELS----AI----LEILLNGM-PADDPRDR-SNL 132 (176)
T ss_pred CCcccccChHHh--cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc----HH----HHHHHHHh-ccCCcccc-ccH
Confidence 589999999998 56678999999999999999999999986432211 11 11111111 10101100 011
Q ss_pred HHHH--HHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIV--RKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~--~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.... ..+..++..||+.+|.+||++.+++..+...
T Consensus 133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 1122 2477888889999999999999999876544
No 10
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.78 E-value=1.6e-19 Score=128.56 Aligned_cols=96 Identities=26% Similarity=0.347 Sum_probs=74.7
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
+.||+||.+ ..+.|+.|+|||||||++||+++ |..||....... +...+.++.....|...++
T Consensus 868 vkWm~PEsl--~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~----------v~~~~~~ggRL~~P~~CP~---- 931 (1025)
T KOG1095|consen 868 VKWMPPESL--KDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE----------VLLDVLEGGRLDPPSYCPE---- 931 (1025)
T ss_pred eecCCHHHH--hhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH----------HHHHHHhCCccCCCCCCCh----
Confidence 689999998 55899999999999999999998 677887654332 3332223335555666666
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+.++|.+||+.+|++||++..|++.+.++.+.
T Consensus 932 ---~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 932 ---KLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred ---HHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 677888899999999999999999988877654
No 11
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.78 E-value=2.1e-19 Score=122.10 Aligned_cols=96 Identities=22% Similarity=0.325 Sum_probs=81.3
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
.+.|||||.+ ++.+|+..+|||.||+.+||++. |..||.+....+ ....++++..+..|+.+++
T Consensus 555 PIKWmaPESI--NfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------VI~~iEnGeRlP~P~nCPp--- 619 (974)
T KOG4257|consen 555 PIKWMAPESI--NFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------VIGHIENGERLPCPPNCPP--- 619 (974)
T ss_pred ceeecCcccc--chhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------eEEEecCCCCCCCCCCCCh---
Confidence 4689999999 89999999999999999999876 999998876544 5666777877777777666
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..||..||.++|.+||.+.+|...|+++.+
T Consensus 620 ----~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 620 ----ALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred ----HHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 67778888999999999999999988876654
No 12
>PHA02988 hypothetical protein; Provisional
Probab=99.78 E-value=5.4e-19 Score=113.15 Aligned_cols=101 Identities=13% Similarity=0.155 Sum_probs=70.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++.+....++.++||||||+++||+++|..||...... ............+..+...+.
T Consensus 180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~- 249 (283)
T PHA02988 180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK---------EIYDLIINKNNSLKLPLDCPL- 249 (283)
T ss_pred ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhcCCCCCCCCcCcH-
Confidence 4588899999998433367899999999999999999999999754221 111112122222223322333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++.+||+.||++||++++|+..|+...
T Consensus 250 ------~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 250 ------EIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred ------HHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 3455666699999999999999999988654
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.77 E-value=3.7e-20 Score=127.77 Aligned_cols=101 Identities=18% Similarity=0.266 Sum_probs=81.3
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
+.|.|||.+ .+.+|+..+||||||+++||.++ |..||+.....+ .+..++++.....|...+.
T Consensus 798 iRWTAPEAI--a~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd----------VIkaIe~gyRLPpPmDCP~---- 861 (996)
T KOG0196|consen 798 IRWTAPEAI--AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----------VIKAIEQGYRLPPPMDCPA---- 861 (996)
T ss_pred eeecChhHh--hhcccCchhhccccceEEEEecccCCCcccccchHH----------HHHHHHhccCCCCCCCCcH----
Confidence 579999999 78899999999999999999765 999998754322 4444555555555554444
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCCCCCC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEALQVPP 127 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~~ 127 (133)
.+..||+.||++|-+.||.|.+|+..|+++++......
T Consensus 862 ---aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk 899 (996)
T KOG0196|consen 862 ---ALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLK 899 (996)
T ss_pred ---HHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhc
Confidence 88999999999999999999999999999987765443
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=4.4e-19 Score=110.44 Aligned_cols=99 Identities=20% Similarity=0.317 Sum_probs=70.8
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
.+++||+.||+||++ ....|+.++||||+||+++||+.-.+||.+..-.. +...++.+..+..|.
T Consensus 186 ~S~VGTPyYMSPE~i--~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~----------L~~KI~qgd~~~~p~--- 250 (375)
T KOG0591|consen 186 HSLVGTPYYMSPERI--HESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS----------LCKKIEQGDYPPLPD--- 250 (375)
T ss_pred HhhcCCCcccCHHHH--hcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH----------HHHHHHcCCCCCCcH---
Confidence 357999999999999 67899999999999999999999999998752211 445555554443331
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
+.... .+..++..|+..|+..||+...++..+..
T Consensus 251 ~~YS~---~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 251 EHYST---DLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHhhh---HHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 22222 34445556999999999985555544433
No 15
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.5e-17 Score=109.36 Aligned_cols=113 Identities=35% Similarity=0.550 Sum_probs=83.3
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc--cCCC-C
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR--HGLV-T 81 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~ 81 (133)
.||.+|++||++ ..+..+.++||||||++++|+++|+.+.+..... .......|....+.++..... +... .
T Consensus 239 ~gt~gY~~PEy~--~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~---~~~~l~~w~~~~~~~~~~~eiiD~~l~~~ 313 (361)
T KOG1187|consen 239 MGTFGYLAPEYA--STGKLTEKSDVYSFGVVLLELITGRKAVDQSRPR---GELSLVEWAKPLLEEGKLREIVDPRLKEG 313 (361)
T ss_pred CCCCccCChhhh--ccCCcCcccccccchHHHHHHHhCCcccCCCCCc---ccccHHHHHHHHHHCcchhheeCCCccCC
Confidence 799999999998 5678999999999999999999999877654322 223366666555555422221 2211 1
Q ss_pred hhHH-HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 82 EEEE-VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 82 ~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.... ..+.++..++..|++.+|..||+|.+|+..|+.+...
T Consensus 314 ~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 314 EYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred CCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 2121 5778899999999999999999999999999665543
No 16
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.74 E-value=8.2e-18 Score=107.41 Aligned_cols=96 Identities=15% Similarity=0.246 Sum_probs=68.3
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.++..|+|||.+ ....++.++|+||+|++++|+++ |..||.+..... ....+..+.....+...+.
T Consensus 187 ~~~~~y~aPE~~--~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~----------~~~~i~~~~~~~~~~~~~~- 253 (283)
T cd05048 187 LLPVRWMPPEAI--LYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE----------VIEMIRSRQLLPCPEDCPA- 253 (283)
T ss_pred cccccccCHHHh--ccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH----------HHHHHHcCCcCCCcccCCH-
Confidence 356789999987 45678899999999999999997 888886543211 2222323322223333344
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++..||+.||++||++.+|++.|+++
T Consensus 254 ------~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 254 ------RVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred ------HHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 455556669999999999999999999763
No 17
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.73 E-value=2.1e-18 Score=111.79 Aligned_cols=96 Identities=23% Similarity=0.252 Sum_probs=78.6
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
.+.||++|.+ ....|+..+|+||||+.+||+.+ |+.|+....+.. ...-++++.....|...++
T Consensus 461 PvkWMslEal--~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE----------m~~ylkdGyRlaQP~NCPD--- 525 (563)
T KOG1024|consen 461 PVKWMSLEAL--QNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE----------MEHYLKDGYRLAQPFNCPD--- 525 (563)
T ss_pred cccccCHHHH--hhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH----------HHHHHhccceecCCCCCcH---
Confidence 4689999998 66799999999999999999987 888987765543 5555677777777776666
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.++.+|.-||...|++||+++|++.-|.+...
T Consensus 526 ----eLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 526 ----ELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred ----HHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 57777777999999999999999987776543
No 18
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.73 E-value=1.4e-17 Score=108.92 Aligned_cols=99 Identities=24% Similarity=0.349 Sum_probs=69.8
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.++..|+|||++ ....++.++||||||++++++++ |..||....... .....+..+.....+...+.
T Consensus 237 ~~~~~y~aPE~~--~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~---------~~~~~~~~~~~~~~~~~~~~- 304 (338)
T cd05102 237 RLPLKWMAPESI--FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE---------EFCQRLKDGTRMRAPENATP- 304 (338)
T ss_pred CCCccccCcHHh--hcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH---------HHHHHHhcCCCCCCCCCCCH-
Confidence 345789999988 45678999999999999999997 888886532211 02222222322223333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..++..||+.||++||++.+|++.|+++..
T Consensus 305 ------~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 305 ------EIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 35566677999999999999999999998764
No 19
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.72 E-value=2.2e-17 Score=120.33 Aligned_cols=113 Identities=21% Similarity=0.354 Sum_probs=77.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-----cccccC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-----DLKRHG 78 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 78 (133)
..||..|+|||++ ....++.++||||||+++||+++|+.|+...... ......|......... .+....
T Consensus 838 ~~~t~~y~aPE~~--~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (968)
T PLN00113 838 CFISSAYVAPETR--ETKDITEKSDIYGFGLILIELLTGKSPADAEFGV----HGSIVEWARYCYSDCHLDMWIDPSIRG 911 (968)
T ss_pred ccccccccCcccc--cCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC----CCcHHHHHHHhcCccchhheeCccccC
Confidence 3578899999998 5667899999999999999999999998543221 1222233222211110 011111
Q ss_pred CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCC
Q 040499 79 LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 123 (133)
. ..........+.+++.+||+.||++||++.+|++.|+++.+..
T Consensus 912 ~-~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 912 D-VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred C-CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 1 1112234556788999999999999999999999999887654
No 20
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=7.2e-18 Score=113.50 Aligned_cols=93 Identities=26% Similarity=0.457 Sum_probs=72.2
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
.++|||+-|+|||++ ....++.-+||||+||++|.++.|++||+...-.. ....++.. .-..|...+
T Consensus 176 ~TlCGTPNYIAPEVl--~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke----------ty~~Ik~~-~Y~~P~~ls 242 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVL--NKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE----------TYNKIKLN-EYSMPSHLS 242 (592)
T ss_pred ceecCCCcccChhHh--ccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH----------HHHHHHhc-CcccccccC
Confidence 368999999999999 56788999999999999999999999998642211 33333322 223456677
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....+++.+++ +.||.+||++++|+.
T Consensus 243 ~~A~dLI~~lL-------~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 243 AEAKDLIRKLL-------RPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHHHHHHHh-------cCCcccCCCHHHHhc
Confidence 77778887755 999999999999985
No 21
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.72 E-value=1.1e-17 Score=116.47 Aligned_cols=94 Identities=22% Similarity=0.380 Sum_probs=74.1
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
+.|||||.+ ....|+.++||||||+++||+++ |..||.+.... ..+...++.+.....|...+.
T Consensus 485 ~kWmApEsl--~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~---------~~l~~~l~~G~r~~~P~~c~~---- 549 (609)
T KOG0200|consen 485 VKWMAPESL--FDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT---------EELLEFLKEGNRMEQPEHCSD---- 549 (609)
T ss_pred eeecCHHHh--ccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH---------HHHHHHHhcCCCCCCCCCCCH----
Confidence 359999998 55799999999999999999988 77788653211 113446677777777776655
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..+|..||+.+|++||++.++...++..
T Consensus 550 ---eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 550 ---EIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred ---HHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 566777889999999999999999888874
No 22
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.6e-17 Score=113.41 Aligned_cols=96 Identities=25% Similarity=0.343 Sum_probs=80.3
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
+.|.|||.+ .++.|+.|+|||+||+++||+.+ |-.||.+..... ...+++++.....|..+++
T Consensus 430 IKWTAPEsL--AyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq----------VY~LLEkgyRM~~PeGCPp---- 493 (1157)
T KOG4278|consen 430 IKWTAPESL--AYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYGLLEKGYRMDGPEGCPP---- 493 (1157)
T ss_pred ccccCcccc--cccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH----------HHHHHhccccccCCCCCCH----
Confidence 679999998 78899999999999999999987 556776543322 6777888888888888777
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
+++.||.+||+-+|++||++.++-+.++.+...
T Consensus 494 ---kVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 494 ---KVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred ---HHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 677788889999999999999999998877654
No 23
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=1.3e-17 Score=111.68 Aligned_cols=97 Identities=22% Similarity=0.365 Sum_probs=66.4
Q ss_pred CCccccccCcccccccc---------CccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccc
Q 040499 4 ARGTVSYIAPEVFCRNF---------GGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDL 74 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~---------~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (133)
-+||+.||+||.+.... -..+.++||||+||++|+|+.|+.||..... ....+......+...
T Consensus 521 QvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--------~~aKl~aI~~P~~~I 592 (677)
T KOG0596|consen 521 QVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--------QIAKLHAITDPNHEI 592 (677)
T ss_pred ccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH--------HHHHHHhhcCCCccc
Confidence 57999999999873211 1366889999999999999999999975421 111122222222222
Q ss_pred cccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 75 KRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..|...... .++.+|..||+.||++|+++.+|++
T Consensus 593 efp~~~~~~------~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 593 EFPDIPEND------ELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred cccCCCCch------HHHHHHHHHHhcCcccCCCcHHHhc
Confidence 333322221 2778888899999999999999986
No 24
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.71 E-value=5.8e-18 Score=108.47 Aligned_cols=96 Identities=21% Similarity=0.316 Sum_probs=71.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
.+.||+.|||||++.. +......+||||+||++.||++|+.||.... ....+..........+..|...++
T Consensus 180 ~~~Gtp~~maPEvi~~-g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~--------~~~~~~~~ig~~~~~P~ip~~ls~ 250 (313)
T KOG0198|consen 180 SVQGTPNYMAPEVIRN-GEVARRESDIWSLGCTVVEMLTGKPPWSEFF--------EEAEALLLIGREDSLPEIPDSLSD 250 (313)
T ss_pred cccCCccccCchhhcC-CCcCCccchhhhcCCEEEeccCCCCcchhhc--------chHHHHHHHhccCCCCCCCcccCH
Confidence 4679999999999932 2223358999999999999999999987641 112223334444444566777777
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...+++.+ |++.||+.|||+++++.
T Consensus 251 ~a~~Fl~~-------C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 251 EAKDFLRK-------CFKRDPEKRPTAEELLE 275 (313)
T ss_pred HHHHHHHH-------HhhcCcccCcCHHHHhh
Confidence 77777777 88999999999999987
No 25
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.71 E-value=1.5e-17 Score=112.18 Aligned_cols=105 Identities=20% Similarity=0.224 Sum_probs=74.0
Q ss_pred CccccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
-|++.|||||+++. ....|+..+|||+||+|+|||++|..||.....+.+ -|.. -.+.-. ......
T Consensus 551 ~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI-------ifmV---GrG~l~---pd~s~~ 617 (678)
T KOG0193|consen 551 HGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI-------IFMV---GRGYLM---PDLSKI 617 (678)
T ss_pred ccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe-------EEEe---cccccC---ccchhh
Confidence 47889999999843 234789999999999999999999999984443321 1111 111111 111222
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
..++.+.+.+|+..||.+++++||.+.+|+..|+++...
T Consensus 618 ~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 618 RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 234455677777789999999999999999988877764
No 26
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.69 E-value=4.9e-17 Score=104.35 Aligned_cols=98 Identities=17% Similarity=0.301 Sum_probs=69.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.|+..|++||.+ ....++.++|+||+|++++++++ |..|+....... .......+.....+...+.
T Consensus 186 ~~~~~y~aPE~~--~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 252 (291)
T cd05094 186 MLPIRWMPPESI--MYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE----------VIECITQGRVLERPRVCPK- 252 (291)
T ss_pred CcceeecChHHh--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----------HHHHHhCCCCCCCCccCCH-
Confidence 356789999988 45678889999999999999998 888875432211 1122222222222232333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..++.+||+.+|++||++.+|++.|+++..
T Consensus 253 ------~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 253 ------EVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred ------HHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 45566667999999999999999999998865
No 27
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.69 E-value=9.6e-17 Score=102.31 Aligned_cols=94 Identities=18% Similarity=0.323 Sum_probs=65.5
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||++ ....++.++||||+|++++++++ |..||....... ....+..+.....+...+.
T Consensus 186 ~~~~y~aPE~~--~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-- 251 (280)
T cd05049 186 LPIRWMPPESI--MYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE----------VIECITQGRLLQRPRTCPS-- 251 (280)
T ss_pred ccceecChhhh--ccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH----------HHHHHHcCCcCCCCCCCCH--
Confidence 45679999998 55678899999999999999998 888875432211 1122222222222333344
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++..||+.||++||++.+|++.|++
T Consensus 252 -----~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 252 -----EVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred -----HHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 34555666999999999999999998864
No 28
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.69 E-value=1.1e-16 Score=100.98 Aligned_cols=94 Identities=22% Similarity=0.297 Sum_probs=66.6
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|+|||.+ ....++.++|+||+|++++|+++ |..||....... ....+..+..+..+...+..
T Consensus 161 ~~~y~aPE~~--~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~-- 226 (257)
T cd05116 161 PVKWYAPECM--NYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE----------VTQMIESGERMECPQRCPPE-- 226 (257)
T ss_pred CccccCHhHh--ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH----------HHHHHHCCCCCCCCCCCCHH--
Confidence 4689999987 45677889999999999999997 888886532211 22222333333334444443
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
+.+++..||+.||++||++.+|...|++.
T Consensus 227 -----l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 227 -----MYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred -----HHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 44555569999999999999999998764
No 29
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.68 E-value=9.8e-17 Score=101.79 Aligned_cols=95 Identities=22% Similarity=0.281 Sum_probs=66.6
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||.+ ....++.++||||+|++++++++ |..||....... ....+..+.....+...+.
T Consensus 170 ~~~~y~aPE~~--~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-- 235 (266)
T cd05064 170 SPVLWAAPEAI--QYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD----------VIKAVEDGFRLPAPRNCPN-- 235 (266)
T ss_pred CceeecCHHHH--hhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH----------HHHHHHCCCCCCCCCCCCH--
Confidence 45689999988 55678899999999999999775 888886542211 2222222222222333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+.+++..||+.+|++||++.+|...|+++
T Consensus 236 -----~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 236 -----LLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -----HHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 455566669999999999999999988764
No 30
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.68 E-value=7.3e-17 Score=103.43 Aligned_cols=98 Identities=17% Similarity=0.286 Sum_probs=69.1
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||.+ ....++.++|+||+|++++++++ |..|+....... ....+..+.....+...+.
T Consensus 184 ~~~~y~aPE~~--~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~----------~~~~i~~~~~~~~~~~~~~-- 249 (288)
T cd05093 184 LPIRWMPPESI--MYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE----------VIECITQGRVLQRPRTCPK-- 249 (288)
T ss_pred ccccccCHHHh--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH----------HHHHHHcCCcCCCCCCCCH--
Confidence 46679999988 55678899999999999999998 788875432211 1122222222222333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+.+++.+||+.||.+||++.+|+..|+++.+.
T Consensus 250 -----~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 250 -----EVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred -----HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 456666779999999999999999999888754
No 31
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.68 E-value=1.6e-16 Score=101.51 Aligned_cols=95 Identities=17% Similarity=0.262 Sum_probs=65.8
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.++..|+|||.+ ....++.++||||+|++++|+++ |..|+...... . ....+........+...+..
T Consensus 187 ~~~~~y~aPE~~--~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---------~-~~~~i~~~~~~~~~~~~~~~ 254 (283)
T cd05091 187 LLPIRWMSPEAI--MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---------D-VIEMIRNRQVLPCPDDCPAW 254 (283)
T ss_pred cCCccccCHHHH--hcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---------H-HHHHHHcCCcCCCCCCCCHH
Confidence 346789999987 45678889999999999999998 66676543221 1 22222222222223333443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
+..++..||+.+|++||++.+|+..|+.
T Consensus 255 -------~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 255 -------VYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -------HHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 4455666999999999999999999875
No 32
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.68 E-value=8.7e-18 Score=109.02 Aligned_cols=98 Identities=22% Similarity=0.301 Sum_probs=66.4
Q ss_pred CCCCCccccccCccccccccC-ccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc---
Q 040499 1 MLDARGTVSYIAPEVFCRNFG-GISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR--- 76 (133)
Q Consensus 1 ~~~~~gt~~~~ape~~~~~~~-~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 76 (133)
|.++|||+.|.|||++...+. .+..++|+||+||+++-+++|.+||.+...... +.+.+..+.....
T Consensus 335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s---------l~eQI~~G~y~f~p~~ 405 (475)
T KOG0615|consen 335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS---------LKEQILKGRYAFGPLQ 405 (475)
T ss_pred hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc---------HHHHHhcCcccccChh
Confidence 568999999999999843222 334588999999999999999999987644321 2222222222111
Q ss_pred cCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 77 HGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
-..+++. .+.|+..+|..||++||++.++++
T Consensus 406 w~~Isee-------a~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 406 WDRISEE-------ALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hhhhhHH-------HHHHHHHhhEeCcccCcCHHHHhc
Confidence 1223444 444445567999999999999885
No 33
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.67 E-value=1.7e-16 Score=101.36 Aligned_cols=98 Identities=24% Similarity=0.382 Sum_probs=69.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.|+..|++||.+ ....++.++|+||||++++|+++ |..|+.+..... ....+..+.....+...+.
T Consensus 172 ~~~~~y~~pE~~--~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 238 (279)
T cd05111 172 KTPIKWMALESI--LFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE----------VPDLLEKGERLAQPQICTI- 238 (279)
T ss_pred CCcccccCHHHh--ccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH----------HHHHHHCCCcCCCCCCCCH-
Confidence 456789999988 55678999999999999999998 888876542211 2222233322222332222
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..++..||..||++||++.+++..|..+.+
T Consensus 239 ------~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 239 ------DVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ------HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 34556667999999999999999998888664
No 34
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.67 E-value=5.6e-17 Score=103.73 Aligned_cols=87 Identities=21% Similarity=0.355 Sum_probs=69.3
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
+++|||+-|||||++ ....|+..+|+||+|+++++|++|.+||....... ....+.....+..+...+
T Consensus 183 ~tfcGT~eYmAPEil--~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~----------~~~~I~~~k~~~~p~~ls 250 (357)
T KOG0598|consen 183 RTFCGTPEYMAPEIL--LGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK----------MYDKILKGKLPLPPGYLS 250 (357)
T ss_pred ccccCCccccChHHH--hcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH----------HHHHHhcCcCCCCCccCC
Confidence 358999999999999 56799999999999999999999999998764332 333444443344466678
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCC
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRS 107 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rp 107 (133)
....+++++++ +.||.+|.
T Consensus 251 ~~ardll~~LL-------~rdp~~RL 269 (357)
T KOG0598|consen 251 EEARDLLKKLL-------KRDPRQRL 269 (357)
T ss_pred HHHHHHHHHHh-------ccCHHHhc
Confidence 88888988866 99999996
No 35
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.67 E-value=1.9e-16 Score=100.29 Aligned_cols=94 Identities=29% Similarity=0.387 Sum_probs=65.6
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++||||+|++++++++ |..|+....... ....+........+...+.
T Consensus 168 ~~~y~aPE~~--~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 232 (263)
T cd05052 168 PIKWTAPESL--AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------VYELLEKGYRMERPEGCPP--- 232 (263)
T ss_pred ccccCCHHHh--ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH----------HHHHHHCCCCCCCCCCCCH---
Confidence 4579999987 55678889999999999999998 888875432111 1222222222223333344
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++.+||+.||++||++.++++.|+.+
T Consensus 233 ----~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 233 ----KVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ----HHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 344555669999999999999999999865
No 36
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.67 E-value=1.8e-16 Score=105.18 Aligned_cols=97 Identities=20% Similarity=0.403 Sum_probs=67.1
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||++ ....++.++||||+|++++++++ |+.||....... . .......+.....+...+.
T Consensus 276 ~~~~y~aPE~~--~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~-- 342 (374)
T cd05106 276 LPVKWMAPESI--FDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-----K----FYKMVKRGYQMSRPDFAPP-- 342 (374)
T ss_pred CccceeCHHHh--cCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-----H----HHHHHHcccCccCCCCCCH--
Confidence 45679999988 45678999999999999999997 888886542211 0 1111222222222332333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++..||+.||++||++.+|++.|+++.
T Consensus 343 -----~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 343 -----EIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 4555666699999999999999999998764
No 37
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.67 E-value=4.3e-17 Score=103.15 Aligned_cols=93 Identities=25% Similarity=0.403 Sum_probs=61.8
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+...|++||.+ ....++.++||||||+++||+++ +..|+...... . ....+........+...+.
T Consensus 166 ~~~~~~~aPE~~--~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~- 232 (259)
T PF07714_consen 166 QLPLRYLAPEVL--KDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE---------E-IIEKLKQGQRLPIPDNCPK- 232 (259)
T ss_dssp ESGGGGS-HHHH--HHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH---------H-HHHHHHTTEETTSBTTSBH-
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccc---------c-ccccccccccceeccchhH-
Confidence 356789999998 45668999999999999999999 66776543211 1 2222333333333444444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEML 116 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l 116 (133)
.+..++.+||..||++||++.+|++.|
T Consensus 233 ------~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 233 ------DIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ------HHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ------HHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 455566669999999999999999876
No 38
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.67 E-value=2.2e-16 Score=103.38 Aligned_cols=99 Identities=25% Similarity=0.381 Sum_probs=69.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.++..|+|||++ ....++.++||||+|++++++++ |..||....... . ....+........+.....
T Consensus 236 ~~~~~y~aPE~~--~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~- 303 (337)
T cd05054 236 RLPLKWMAPESI--FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-----E----FCRRLKEGTRMRAPEYATP- 303 (337)
T ss_pred CCCccccCcHHh--cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-----H----HHHHHhccCCCCCCccCCH-
Confidence 356689999988 45678899999999999999997 888886532211 1 1122222222222332233
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..++..||+.+|++||++.+|++.|+++.+
T Consensus 304 ------~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 304 ------EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 45566677999999999999999999988764
No 39
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.66 E-value=1.1e-16 Score=110.24 Aligned_cols=87 Identities=26% Similarity=0.402 Sum_probs=70.2
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
+.|.|||.+ .+..|+.++|||+|||++|||++ |+.|+.+..... +...+.++.....|+.+++
T Consensus 279 fAWCaPEsL--rh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q----------IL~~iD~~erLpRPk~cse---- 342 (1039)
T KOG0199|consen 279 FAWCAPESL--RHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ----------ILKNIDAGERLPRPKYCSE---- 342 (1039)
T ss_pred ccccCHhHh--ccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH----------HHHhccccccCCCCCCChH----
Confidence 569999999 78899999999999999999998 677887654432 5555666666666665555
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHH
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAV 113 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~ 113 (133)
.++++|..||..+|.+||+|..|.
T Consensus 343 ---dIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 343 ---DIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred ---HHHHHHHHhccCCccccccHHHHH
Confidence 677778889999999999999996
No 40
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.66 E-value=1.3e-16 Score=108.21 Aligned_cols=97 Identities=20% Similarity=0.245 Sum_probs=69.2
Q ss_pred CCCCccccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 2 LDARGTVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
.+|+||++|||||++.. -.+.|+-++||||+|+++.|+..+++|+...+. .+.+..+..+..+......+
T Consensus 180 nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA---------MSALYHIAQNesPtLqs~eW 250 (948)
T KOG0577|consen 180 NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA---------MSALYHIAQNESPTLQSNEW 250 (948)
T ss_pred hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH---------HHHHHHHHhcCCCCCCCchh
Confidence 36899999999999832 356899999999999999999999999865433 22244444433333333333
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+..+. +++..|+++-|.+|||..+++.
T Consensus 251 S~~F~-------~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 251 SDYFR-------NFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHH-------HHHHHHHhhCcccCCcHHHHhh
Confidence 44333 3444499999999999998875
No 41
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.66 E-value=1.9e-16 Score=108.32 Aligned_cols=93 Identities=20% Similarity=0.284 Sum_probs=65.3
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.+||..|+|||++ ....++.++||||+|++++++++|+.||...... . .......+.....+...+.
T Consensus 204 ~~~Gt~~Y~aPE~~--~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~---------~-~~~~~~~~~~~~~~~~~~~ 271 (496)
T PTZ00283 204 TFCGTPYYVAPEIW--RRKPYSKKADMFSLGVLLYELLTLKRPFDGENME---------E-VMHKTLAGRYDPLPPSISP 271 (496)
T ss_pred cccCCcceeCHHHh--CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---------H-HHHHHhcCCCCCCCCCCCH
Confidence 35689999999998 5567899999999999999999999998643211 1 1111111222222333444
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.||.+||++.+++.
T Consensus 272 -------~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 272 -------EMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred -------HHHHHHHHHcccChhhCcCHHHHHh
Confidence 3445555699999999999999875
No 42
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.66 E-value=1.5e-16 Score=108.91 Aligned_cols=95 Identities=19% Similarity=0.342 Sum_probs=70.4
Q ss_pred CCCccccccCcccc-c--cccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc--ccccc
Q 040499 3 DARGTVSYIAPEVF-C--RNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE--DLKRH 77 (133)
Q Consensus 3 ~~~gt~~~~ape~~-~--~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 77 (133)
+|.||++|||||++ + .....|+.++||||||+.+.||..+.+|-....... ..-.+.... ....|
T Consensus 189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR----------VllKiaKSePPTLlqP 258 (1187)
T KOG0579|consen 189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR----------VLLKIAKSEPPTLLQP 258 (1187)
T ss_pred cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH----------HHHHHhhcCCCcccCc
Confidence 58999999999987 2 233479999999999999999999998876544321 222222222 22336
Q ss_pred CCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 78 GLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..++..+.++++. ||.+||..||++.++++
T Consensus 259 S~Ws~~F~DfLk~-------cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 259 SHWSRSFSDFLKR-------CLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred chhhhHHHHHHHH-------HHhcCCccCCCHHHHhh
Confidence 6677777777776 99999999999999875
No 43
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.66 E-value=3.6e-16 Score=98.82 Aligned_cols=95 Identities=21% Similarity=0.334 Sum_probs=65.3
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+||+|++++++++ |..||...... . ....+............+.
T Consensus 166 ~~~~y~aPE~~--~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 231 (261)
T cd05072 166 FPIKWTAPEAI--NFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS------D----VMSALQRGYRMPRMENCPD-- 231 (261)
T ss_pred cceecCCHHHh--ccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH------H----HHHHHHcCCCCCCCCCCCH--
Confidence 45679999988 55678889999999999999998 88887643221 1 1111111111111222333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++.+||+.+|++||+++++...|+++
T Consensus 232 -----~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 232 -----ELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -----HHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 355666679999999999999999998863
No 44
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.66 E-value=3e-16 Score=99.03 Aligned_cols=95 Identities=26% Similarity=0.414 Sum_probs=66.5
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+||+|++++++++ |..||...... . ....+........+...+.
T Consensus 161 ~~~y~aPE~~--~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~--- 225 (257)
T cd05060 161 PLKWYAPECI--NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA------E----VIAMLESGERLPRPEECPQ--- 225 (257)
T ss_pred cccccCHHHh--cCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH------H----HHHHHHcCCcCCCCCCCCH---
Confidence 4579999988 55678899999999999999997 88888643221 1 1111111212222333333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++.+||+.+|++||++.+|.+.|+++.
T Consensus 226 ----~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 226 ----EIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ----HHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 4556667799999999999999999998764
No 45
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=2.3e-16 Score=107.66 Aligned_cols=99 Identities=19% Similarity=0.325 Sum_probs=79.0
Q ss_pred CCCCccccccCccccccccCccc-cccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGIS-HKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~-~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
.+.||++-|.|||++ .+..|. .++||||.||+++.+++|+.||++.+... +...+..+ ....|..+
T Consensus 169 eTSCGSPHYA~PEIV--~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~----------LLlKV~~G-~f~MPs~I 235 (786)
T KOG0588|consen 169 ETSCGSPHYAAPEIV--SGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV----------LLLKVQRG-VFEMPSNI 235 (786)
T ss_pred cccCCCcccCCchhh--cCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH----------HHHHHHcC-cccCCCcC
Confidence 467999999999999 455555 78999999999999999999998665432 44444544 33667888
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCc
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGL 120 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~ 120 (133)
+..+.+++.+|+ ..||+.|.++.+|++ .|.+..
T Consensus 236 s~eaQdLLr~ml-------~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 236 SSEAQDLLRRML-------DVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred CHHHHHHHHHHh-------ccCccccccHHHHhhCchhhcCC
Confidence 999999999855 999999999999987 555443
No 46
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.66 E-value=1.4e-16 Score=105.13 Aligned_cols=95 Identities=18% Similarity=0.278 Sum_probs=72.3
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
++.+||+.|++||++ ....|+.|+|+||+||+++|+++-+++|....... +...+.+......+...+
T Consensus 164 ~tvvGTp~YmcPEil--~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~----------Li~ki~~~~~~Plp~~ys 231 (426)
T KOG0589|consen 164 STVVGTPYYMCPEIL--SDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE----------LILKINRGLYSPLPSMYS 231 (426)
T ss_pred heecCCCcccCHHHh--CCCCCCccCcchhhcchHHHHHhcccccCccchHH----------HHHHHhhccCCCCCcccc
Confidence 457899999999999 67899999999999999999999999998765543 333333333334455555
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
.....+++. |++.+|..||++.+++..
T Consensus 232 ~el~~lv~~-------~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 232 SELRSLVKS-------MLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHHHH-------HhhcCCccCCCHHHHhhC
Confidence 544444444 779999999999999863
No 47
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.66 E-value=3.1e-16 Score=99.11 Aligned_cols=96 Identities=23% Similarity=0.283 Sum_probs=65.1
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHcc-CCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGV-RNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||.+ ....++.++||||+|+++++++++ .+|+..... .. .......+.....+...+.
T Consensus 164 ~~~~y~aPE~~--~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~-- 229 (262)
T cd05058 164 LPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS------FD----ITVYLLQGRRLLQPEYCPD-- 229 (262)
T ss_pred CCccccChhHh--ccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH------HH----HHHHHhcCCCCCCCCcCCH--
Confidence 45679999987 456788999999999999999995 445543211 11 1111222222222232333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+.+++..||+.+|++||++.+|+..|+++.
T Consensus 230 -----~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 230 -----PLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred -----HHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 4556677799999999999999999998765
No 48
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.65 E-value=4e-16 Score=103.51 Aligned_cols=96 Identities=20% Similarity=0.333 Sum_probs=65.8
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||++ ....++.++||||+|++++++++ |..||...... .. ....+..+.....+...+.
T Consensus 278 ~~~~y~aPE~~--~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~-- 344 (375)
T cd05104 278 LPVKWMAPESI--FNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-----SK----FYKMIKEGYRMLSPECAPS-- 344 (375)
T ss_pred CCcceeChhHh--cCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-----HH----HHHHHHhCccCCCCCCCCH--
Confidence 34579999998 55678899999999999999997 77777543211 01 1222222222222332333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++..||+.||++||++.+|++.|++.
T Consensus 345 -----~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 345 -----EMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----HHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 455666669999999999999999999864
No 49
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.65 E-value=7.7e-16 Score=97.56 Aligned_cols=99 Identities=17% Similarity=0.266 Sum_probs=67.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcccccc-CCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRH-GLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 82 (133)
..|+..|+|||.+ ....++.++|+||+|++++++++|..|+....... .. ....+.....+..+ ...+
T Consensus 166 ~~~~~~~~aPE~~--~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~- 234 (267)
T cd08228 166 LVGTPYYMSPERI--HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-------FS-LCQKIEQCDYPPLPTEHYS- 234 (267)
T ss_pred CCCCccccChhhh--ccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH-------HH-HHHHHhcCCCCCCChhhcC-
Confidence 4578899999988 45567889999999999999999999986432211 11 11222221111111 1122
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
..+.+++.+||+.+|++||++.+|++.++.+
T Consensus 235 ------~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 235 ------EKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred ------HHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 3455666679999999999999999998865
No 50
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.65 E-value=5.8e-16 Score=98.99 Aligned_cols=95 Identities=18% Similarity=0.273 Sum_probs=65.9
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.++..|++||.+ ....++.++|+||+|++++++++ |..|+.+..... .............+...+.
T Consensus 187 ~~~~~y~aPE~~--~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 253 (283)
T cd05090 187 LLPIRWMPPEAI--MYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE----------VIEMVRKRQLLPCSEDCPP- 253 (283)
T ss_pred CccceecChHHh--ccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH----------HHHHHHcCCcCCCCCCCCH-
Confidence 345679999987 45678899999999999999998 877876432211 2222222222222333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++..||+.||++||++.+|.+.|.+
T Consensus 254 ------~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 254 ------RMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ------HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 44556666999999999999999998875
No 51
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.65 E-value=4.7e-16 Score=99.33 Aligned_cols=94 Identities=16% Similarity=0.306 Sum_probs=64.5
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+||+|++++++++ |..|+....... .......+.....+...+.
T Consensus 186 ~~~~y~aPE~~--~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-- 251 (280)
T cd05092 186 LPIRWMPPESI--LYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE----------AIECITQGRELERPRTCPP-- 251 (280)
T ss_pred ccccccCHHHh--ccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH----------HHHHHHcCccCCCCCCCCH--
Confidence 45679999987 55678899999999999999998 777875432211 1111122222222333344
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||+.||.+||++.+|...|++
T Consensus 252 -----~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 252 -----EVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred -----HHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 34455566999999999999999998864
No 52
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.65 E-value=6e-16 Score=97.60 Aligned_cols=93 Identities=25% Similarity=0.384 Sum_probs=64.1
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||++ ....++.++|+||+|++++++++ |+.|+....... ....+........+...+.
T Consensus 163 ~~~~y~aPE~~--~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~----------~~~~i~~~~~~~~~~~~~~-- 228 (256)
T cd05114 163 FPVKWSPPEVF--NFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE----------VVEMISRGFRLYRPKLASM-- 228 (256)
T ss_pred CchhhCChhhc--ccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH----------HHHHHHCCCCCCCCCCCCH--
Confidence 45579999998 45678889999999999999998 788876432211 1112222222222332232
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.+..++..||+.+|++||++.++++.|.
T Consensus 229 -----~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 229 -----TVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred -----HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 4566677799999999999999998763
No 53
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.65 E-value=4.2e-16 Score=100.05 Aligned_cols=96 Identities=25% Similarity=0.355 Sum_probs=66.4
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++||||||++++++++ |..|+....... .............+...+.
T Consensus 196 ~~~~y~aPE~~--~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-- 261 (293)
T cd05053 196 LPVKWMAPEAL--FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE----------LFKLLKEGYRMEKPQNCTQ-- 261 (293)
T ss_pred CCccccCHHHh--ccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH----------HHHHHHcCCcCCCCCCCCH--
Confidence 34679999987 45678899999999999999987 777775432211 1222222222222222233
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++..||+.||++||++.+|++.|+++.
T Consensus 262 -----~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 262 -----ELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred -----HHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 4556667799999999999999999998765
No 54
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.65 E-value=3.4e-16 Score=100.80 Aligned_cols=99 Identities=22% Similarity=0.345 Sum_probs=68.3
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||++ ....++.++||||+|++++++++ |..||....... .......+.....+...+.
T Consensus 181 ~~~y~aPE~~--~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 245 (297)
T cd05089 181 PVRWMAIESL--NYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE----------LYEKLPQGYRMEKPRNCDD--- 245 (297)
T ss_pred CccccCchhh--ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH----------HHHHHhcCCCCCCCCCCCH---
Confidence 3469999987 45678899999999999999997 888886432211 1111222222222333333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCCC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEALQ 124 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~~ 124 (133)
.+.+++.+||+.+|.+||++.+|++.|+++.....
T Consensus 246 ----~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 246 ----EVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred ----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 34556666999999999999999999888776543
No 55
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.64 E-value=4.7e-16 Score=99.13 Aligned_cols=94 Identities=19% Similarity=0.314 Sum_probs=64.4
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||.+ ....++.++|+||+|++++++++ +..|+...... . .............+...+.
T Consensus 183 ~~~~y~aPE~~--~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 248 (277)
T cd05062 183 LPVRWMSPESL--KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE------Q----VLRFVMEGGLLDKPDNCPD-- 248 (277)
T ss_pred cCHhhcChhHh--hcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------H----HHHHHHcCCcCCCCCCCCH--
Confidence 46679999998 45678899999999999999998 67777543221 1 1111112222222333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||+.||++||++.+++..|++
T Consensus 249 -----~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 249 -----MLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred -----HHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 45556667999999999999999998864
No 56
>PTZ00284 protein kinase; Provisional
Probab=99.64 E-value=6.2e-16 Score=105.23 Aligned_cols=45 Identities=22% Similarity=0.197 Sum_probs=40.0
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..+||..|+|||++ .+..++.++||||+||+++|+++|+.||...
T Consensus 304 ~~~gt~~Y~APE~~--~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 304 AIVSTRHYRSPEVV--LGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred cccCCccccCcHHh--hcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 45799999999998 5567899999999999999999999999754
No 57
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.64 E-value=3.8e-17 Score=112.65 Aligned_cols=98 Identities=21% Similarity=0.336 Sum_probs=72.8
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
.++.||.-|||||++...-..|...+|||||||...||.+|++||........ .+....--...+.+|+..+
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA--------AMFkVGmyKvHP~iPeels 805 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA--------AMFKVGMYKVHPPIPEELS 805 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--------hhhhhcceecCCCCcHHHH
Confidence 36889999999999965556899999999999999999999999987654321 1222222233445555555
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....+++.+ |...||.+||+++++++
T Consensus 806 aeak~Filr-------cFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 806 AEAKNFILR-------CFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHH-------HcCCCcccCccHHHhcc
Confidence 555555554 99999999999999986
No 58
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.64 E-value=6.9e-16 Score=97.97 Aligned_cols=95 Identities=27% Similarity=0.375 Sum_probs=66.4
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||++ ....++.++||||+|++++|+++ |..|+...... . .......+.....+...+.
T Consensus 177 ~~~~~~~pe~~--~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 242 (273)
T cd05035 177 MPVKWIAIESL--ADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH------E----IYDYLRHGNRLKQPEDCLD-- 242 (273)
T ss_pred CCccccCHhhc--ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH------H----HHHHHHcCCCCCCCcCCCH--
Confidence 35679999987 55678899999999999999998 77777543221 1 1222222222223333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++..||+.||++||++.+|+..|+++
T Consensus 243 -----~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 243 -----ELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -----HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 455666669999999999999999998875
No 59
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.64 E-value=6.4e-16 Score=98.39 Aligned_cols=95 Identities=24% Similarity=0.341 Sum_probs=66.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.++..|+|||.+ ....++.++|+||+|++++++++ +..||...... . .............+...+.
T Consensus 182 ~~~~~y~aPE~~--~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~- 248 (277)
T cd05032 182 LLPVRWMAPESL--KDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE------E----VLKFVIDGGHLDLPENCPD- 248 (277)
T ss_pred CccccccCHHHH--hcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH------H----HHHHHhcCCCCCCCCCCCH-
Confidence 356789999987 45678889999999999999998 88887543211 1 1112222222233333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++..||+.+|++||++.+|+..|++
T Consensus 249 ------~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 249 ------KLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ------HHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 45566677999999999999999998864
No 60
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.64 E-value=4.3e-16 Score=99.40 Aligned_cols=97 Identities=23% Similarity=0.260 Sum_probs=67.9
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||++ ....++.++||||+|++++++++ |+.|+...... . .............+...++
T Consensus 181 ~~~~y~apE~~--~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 246 (280)
T cd05043 181 RPVKWMALESL--VNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF------E----MAAYLKDGYRLAQPINCPD-- 246 (280)
T ss_pred cchhccCHHHH--hcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH------H----HHHHHHcCCCCCCCCcCCH--
Confidence 46679999987 45678899999999999999998 88888653221 1 1112222222112222233
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+.+++.+||+.||++||++.+|+..|+++.+
T Consensus 247 -----~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 247 -----ELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -----HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 45667777999999999999999999988764
No 61
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.64 E-value=1.7e-15 Score=96.01 Aligned_cols=100 Identities=18% Similarity=0.288 Sum_probs=67.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc-cCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR-HGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 82 (133)
..|+..|+|||.+ ....++.++|+||+|++++++++|..|+....... .. ..........+.. ....+.
T Consensus 166 ~~~~~~~~ape~~--~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08229 166 LVGTPYYMSPERI--HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-------YS-LCKKIEQCDYPPLPSDHYSE 235 (267)
T ss_pred ccCCcCccCHHHh--cCCCccchhhHHHHHHHHHHHHhCCCCcccccchH-------HH-HhhhhhcCCCCCCCcccccH
Confidence 4678899999988 45677889999999999999999999986432210 01 1111111111111 111222
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++.+||+.||++||++.+|++.++++.
T Consensus 236 -------~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 236 -------ELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -------HHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 4555556699999999999999999888764
No 62
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.63 E-value=6.9e-16 Score=98.98 Aligned_cols=97 Identities=24% Similarity=0.326 Sum_probs=68.5
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++||||+|++++++++ |..|+....... .............+...+.
T Consensus 191 ~~~~y~apE~~--~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-- 256 (290)
T cd05045 191 IPVKWMAIESL--FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER----------LFNLLKTGYRMERPENCSE-- 256 (290)
T ss_pred CCccccCHHHH--ccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH----------HHHHHhCCCCCCCCCCCCH--
Confidence 45689999987 45678899999999999999998 888875432211 2222222222222333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..++..||+.+|++||++.+++..|+++..
T Consensus 257 -----~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 257 -----EMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -----HHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 45566667999999999999999999988754
No 63
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.63 E-value=5.1e-16 Score=105.90 Aligned_cols=93 Identities=19% Similarity=0.242 Sum_probs=64.1
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.+||..|+|||++ ....++.++||||+|++++++++|..||...... . ....+..+.....+...+.
T Consensus 230 ~~~gt~~y~aPE~~--~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~---------~-~~~~~~~~~~~~~~~~~s~ 297 (478)
T PTZ00267 230 SFCGTPYYLAPELW--ERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR---------E-IMQQVLYGKYDPFPCPVSS 297 (478)
T ss_pred ccCCCccccCHhHh--CCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH---------H-HHHHHHhCCCCCCCccCCH
Confidence 35699999999998 5567899999999999999999999998643211 1 1111111212122333333
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.||++||++.+++.
T Consensus 298 -------~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 298 -------GMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -------HHHHHHHHHhccChhhCcCHHHHHh
Confidence 3455556699999999999998864
No 64
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.63 E-value=7.5e-16 Score=97.34 Aligned_cols=94 Identities=22% Similarity=0.306 Sum_probs=65.9
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+||+|++++++++ |..||....... ....+..+.....+...+.
T Consensus 161 ~~~y~aPE~~--~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 225 (257)
T cd05115 161 PLKWYAPECI--NFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE----------VMSFIEQGKRLDCPAECPP--- 225 (257)
T ss_pred CcccCCHHHH--ccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH----------HHHHHHCCCCCCCCCCCCH---
Confidence 4679999987 45678889999999999999986 888886542211 2222222222222333333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++.+||+.||++||++.+|.+.|+..
T Consensus 226 ----~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 226 ----EMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ----HHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 455566779999999999999999998764
No 65
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.63 E-value=1.4e-15 Score=96.18 Aligned_cols=94 Identities=23% Similarity=0.319 Sum_probs=64.5
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||.. ....++.++|+||+|++++++++ |..|+...... . ....+........+...+.
T Consensus 165 ~~~~y~aPE~~--~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 230 (260)
T cd05070 165 FPIKWTAPEAA--LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR------E----VLEQVERGYRMPCPQDCPI-- 230 (260)
T ss_pred CCccccChHHH--hcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH------H----HHHHHHcCCCCCCCCcCCH--
Confidence 45579999987 45678889999999999999998 77887543211 1 1111222212222222333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+.+++.+||+.+|++||++.++...|++
T Consensus 231 -----~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 231 -----SLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -----HHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 45566666999999999999999998875
No 66
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.63 E-value=1.5e-15 Score=96.02 Aligned_cols=94 Identities=26% Similarity=0.402 Sum_probs=65.7
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||++ ....++.++|+||+|++++++++ |..||....... ....+........+...+.
T Consensus 165 ~~~~y~~pe~~--~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-- 230 (260)
T cd05067 165 FPIKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE----------VIQNLERGYRMPRPDNCPE-- 230 (260)
T ss_pred ccccccCHHHh--ccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH----------HHHHHHcCCCCCCCCCCCH--
Confidence 45679999988 55677889999999999999998 888886432211 1112222222222333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||+.+|++||+++++...|++
T Consensus 231 -----~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 231 -----ELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----HHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 35556666999999999999999998875
No 67
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.63 E-value=1.1e-15 Score=97.41 Aligned_cols=93 Identities=19% Similarity=0.327 Sum_probs=63.5
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||++ ....++.++||||+|++++++++ |..||....... .............+...+.
T Consensus 184 ~~~y~aPE~~--~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 248 (277)
T cd05036 184 PIKWMPPEAF--LDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE----------VMEFVTGGGRLDPPKGCPG--- 248 (277)
T ss_pred cHhhCCHHHH--hcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH----------HHHHHHcCCcCCCCCCCCH---
Confidence 3569999998 45678999999999999999986 888876432211 1111111111122232333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++..||+.+|++||++.+|++.|++
T Consensus 249 ----~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 249 ----PVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred ----HHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 45566667999999999999999998763
No 68
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.63 E-value=1.3e-15 Score=96.64 Aligned_cols=93 Identities=20% Similarity=0.307 Sum_probs=64.6
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
..|++||++ ....++.++|+||+|++++++++ |..|+...... . ....+........+...+
T Consensus 174 ~~y~~PE~~--~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~------~----~~~~i~~~~~~~~~~~~~----- 236 (268)
T cd05063 174 IRWTAPEAI--AYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH------E----VMKAINDGFRLPAPMDCP----- 236 (268)
T ss_pred ceecCHHHh--hcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH------H----HHHHHhcCCCCCCCCCCC-----
Confidence 469999988 45678899999999999999987 88888643221 1 111122211111122222
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
..+..++.+||+.+|++||++.+|++.|+++
T Consensus 237 --~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 237 --SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 3456777779999999999999999999875
No 69
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.63 E-value=1.2e-15 Score=96.28 Aligned_cols=95 Identities=24% Similarity=0.235 Sum_probs=64.9
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||++ ....++.++|+||+|++++++++ |+.|+...... . ....+........+...+.
T Consensus 161 ~~~~y~aPE~~--~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~-- 226 (256)
T cd05082 161 LPVKWTAPEAL--REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---------D-VVPRVEKGYKMDAPDGCPP-- 226 (256)
T ss_pred cceeecCHHHH--ccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---------H-HHHHHhcCCCCCCCCCCCH--
Confidence 45679999988 45678889999999999999997 87777533211 0 1111222222222233333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++.+||+.+|++||++.++++.|+++
T Consensus 227 -----~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 227 -----VVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -----HHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 445556669999999999999999998764
No 70
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.62 E-value=1.4e-15 Score=96.44 Aligned_cols=95 Identities=21% Similarity=0.291 Sum_probs=65.7
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+||+|++++++++ |..|+...... . ....+........+...+.
T Consensus 170 ~~~~y~~Pe~~--~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 235 (266)
T cd05033 170 IPIRWTAPEAI--AYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ------D----VIKAVEDGYRLPPPMDCPS-- 235 (266)
T ss_pred CCccccChhhh--ccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH------H----HHHHHHcCCCCCCCCCCCH--
Confidence 34679999988 55678899999999999999987 88887543211 1 1222222211122222333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+.+++..||+.+|++||++++|++.|+++
T Consensus 236 -----~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 236 -----ALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----HHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 455667779999999999999999999875
No 71
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.62 E-value=1e-15 Score=99.38 Aligned_cols=96 Identities=20% Similarity=0.293 Sum_probs=66.7
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++||||||+++|++++ |..|+....... .............+...+.
T Consensus 174 ~~~y~apE~~--~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 238 (316)
T cd05108 174 PIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----------ISSILEKGERLPQPPICTI--- 238 (316)
T ss_pred ceeecChHHh--ccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH----------HHHHHhCCCCCCCCCCCCH---
Confidence 5679999988 55678899999999999999987 888876432111 1222222222222332333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..++..||+.+|++||++.+|+..+.++..
T Consensus 239 ----~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 239 ----DVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred ----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 34566667999999999999999998876654
No 72
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.62 E-value=1.3e-15 Score=96.68 Aligned_cols=94 Identities=21% Similarity=0.375 Sum_probs=64.5
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++||||+|++++++++ |..|+...... . ....+........+...+.
T Consensus 175 ~~~~y~aPE~~--~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 240 (269)
T cd05044 175 LPVRWMAPESL--LDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ------E----VLQHVTAGGRLQKPENCPD-- 240 (269)
T ss_pred CCccccCHHHH--ccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH------H----HHHHHhcCCccCCcccchH--
Confidence 45679999988 45678899999999999999997 88887543211 1 1111111222222222233
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||..+|++||++.+|+..|++
T Consensus 241 -----~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 241 -----KIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred -----HHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 45566677999999999999999998864
No 73
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.62 E-value=1.6e-15 Score=96.33 Aligned_cols=95 Identities=26% Similarity=0.296 Sum_probs=65.3
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.. ....++.++|+||+|++++++++ +..|+...... . ....+..+.....+...+.
T Consensus 176 ~~~~~~~pe~~--~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 241 (272)
T cd05075 176 MPVKWIAIESL--ADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS------E----IYDYLRQGNRLKQPPDCLD-- 241 (272)
T ss_pred CCcccCCHHHc--cCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH------H----HHHHHHcCCCCCCCCCCCH--
Confidence 45679999987 45678899999999999999998 67777543211 1 2222222222222222233
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++..||+.||++||++.+|++.|+++
T Consensus 242 -----~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 242 -----GLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -----HHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 355666679999999999999999998864
No 74
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.62 E-value=1.6e-15 Score=97.97 Aligned_cols=96 Identities=20% Similarity=0.344 Sum_probs=66.0
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||.+ ....++.++||||+|++++++++ |..|+....... . .......+.....+...+.
T Consensus 205 ~~~~y~aPE~~--~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~-- 271 (302)
T cd05055 205 LPVKWMAPESI--FNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-----K----FYKLIKEGYRMAQPEHAPA-- 271 (302)
T ss_pred cccccCCHhhh--ccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-----H----HHHHHHcCCcCCCCCCCCH--
Confidence 45679999987 45678889999999999999998 888876433211 0 1112222212222222333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+.+++.+||+.+|++||++.+|+..|++.
T Consensus 272 -----~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 272 -----EIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----HHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 455566669999999999999999998864
No 75
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.62 E-value=1e-15 Score=96.33 Aligned_cols=92 Identities=15% Similarity=0.195 Sum_probs=63.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||+. ....++.++|+||+|++++++++|..|+...... . .............+...+.
T Consensus 161 ~~~~~~y~aPE~~--~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~- 227 (256)
T cd08529 161 IVGTPYYLSPELC--EDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG------A----LILKIIRGVFPPVSQMYSQ- 227 (256)
T ss_pred cccCccccCHHHh--cCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH------H----HHHHHHcCCCCCCccccCH-
Confidence 3578889999998 4566788999999999999999999998644311 0 1111222222222222333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++.+||+.+|++||++.+++.
T Consensus 228 ------~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 228 ------QLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ------HHHHHHHHHccCCcccCcCHHHHhh
Confidence 4555666699999999999999876
No 76
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.62 E-value=2e-15 Score=98.25 Aligned_cols=92 Identities=22% Similarity=0.323 Sum_probs=69.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC--CC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG--LV 80 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 80 (133)
+++||.-|+|||++ .+......+|+|+||+++|||+.|..||.+...... +...+.. ++..|+ ..
T Consensus 294 SFVGThEYlAPEvI--~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T---------l~NIv~~--~l~Fp~~~~v 360 (459)
T KOG0610|consen 294 SFVGTHEYLAPEVI--RGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET---------LRNIVGQ--PLKFPEEPEV 360 (459)
T ss_pred ccccccccccceee--ecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh---------HHHHhcC--CCcCCCCCcc
Confidence 58999999999999 567789999999999999999999999998765431 2222222 222222 34
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCC----HHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSS----MSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps----~~~v~~ 114 (133)
+....+++++++ .+||.+|.. +.+|.+
T Consensus 361 s~~akDLIr~LL-------vKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 361 SSAAKDLIRKLL-------VKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred hhHHHHHHHHHh-------ccChhhhhccccchHHhhc
Confidence 566777888765 999999998 777765
No 77
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.62 E-value=8.4e-16 Score=102.82 Aligned_cols=93 Identities=17% Similarity=0.316 Sum_probs=74.1
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
++++||-.|.+||++ ..+..+..+|+|+|||+++.|+.|.+||.+.+... +.+.+.. .....|...+
T Consensus 245 ~SFVGTAeYVSPElL--~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl----------iFqkI~~-l~y~fp~~fp 311 (604)
T KOG0592|consen 245 SSFVGTAEYVSPELL--NDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL----------IFQKIQA-LDYEFPEGFP 311 (604)
T ss_pred cceeeeecccCHHHh--cCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH----------HHHHHHH-hcccCCCCCC
Confidence 469999999999999 67788899999999999999999999998654421 1121111 1234577788
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+...+++++++ ..||++|+++.+|.+
T Consensus 312 ~~a~dLv~KLL-------v~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 312 EDARDLIKKLL-------VRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHHHHHHHH-------ccCccccccHHHHhh
Confidence 88889999876 899999999999976
No 78
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.62 E-value=2.8e-15 Score=94.86 Aligned_cols=100 Identities=19% Similarity=0.299 Sum_probs=67.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC-CCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG-LVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 82 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|+.|+...... ... .......+.....+. ..+.
T Consensus 166 ~~~~~~y~apE~~--~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08224 166 LVGTPYYMSPERI--HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-------LYS-LCKKIEKCDYPPLPADHYSE 235 (267)
T ss_pred ecCCccccCHHHh--ccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-------HHH-HHhhhhcCCCCCCChhhcCH
Confidence 4578889999988 4567888999999999999999999988543221 000 111111111111121 2222
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++..||+.+|++||++.+|+..|+++.
T Consensus 236 -------~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 236 -------ELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -------HHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 3445566699999999999999999998764
No 79
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.62 E-value=2e-15 Score=95.41 Aligned_cols=93 Identities=23% Similarity=0.311 Sum_probs=64.4
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
..|++||++ ....++.++|+||+|++++++++ |..|+....... .............+...+.
T Consensus 168 ~~y~aPE~~--~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~---- 231 (261)
T cd05068 168 IKWTAPEAA--LYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE----------VLQQVDQGYRMPCPPGCPK---- 231 (261)
T ss_pred eeccCcccc--ccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH----------HHHHHHcCCCCCCCCcCCH----
Confidence 469999987 45678899999999999999998 888876432211 1111111111112222333
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++.+||+.+|++||++.+|...|++.
T Consensus 232 ---~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 232 ---ELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ---HHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 455666779999999999999999999863
No 80
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.62 E-value=1.9e-15 Score=95.55 Aligned_cols=94 Identities=24% Similarity=0.348 Sum_probs=64.6
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.. ....++.++|+||+|++++++++ |..|+...... . .............+...+.
T Consensus 165 ~~~~y~~Pe~~--~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 230 (260)
T cd05069 165 FPIKWTAPEAA--LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR------E----VLEQVERGYRMPCPQGCPE-- 230 (260)
T ss_pred cchhhCCHHHh--ccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H----HHHHHHcCCCCCCCcccCH--
Confidence 45679999987 55678899999999999999998 78887643221 1 1111121211122222233
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||+.||++||++.+|.+.|++
T Consensus 231 -----~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 231 -----SLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -----HHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 45556666999999999999999999875
No 81
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.62 E-value=1.2e-15 Score=96.97 Aligned_cols=95 Identities=21% Similarity=0.333 Sum_probs=65.4
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||++ ....++.++|+||||++++++++ |..||....... .............+...+.
T Consensus 174 ~~~y~apE~~--~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 238 (270)
T cd05047 174 PVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----------LYEKLPQGYRLEKPLNCDD--- 238 (270)
T ss_pred ccccCChHHH--ccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH----------HHHHHhCCCCCCCCCcCCH---
Confidence 4569999987 45678889999999999999997 888875432110 1111111111112222222
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++.+||+.+|.+||++.+++..|+++.
T Consensus 239 ----~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 239 ----EVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ----HHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 4556777799999999999999999998765
No 82
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.62 E-value=1.3e-15 Score=96.15 Aligned_cols=93 Identities=22% Similarity=0.313 Sum_probs=63.6
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.. ....++.++|+||+|++++++++ |..|+...... . ....+........+...+
T Consensus 163 ~~~~y~~pe~~--~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~--- 227 (256)
T cd05113 163 FPVRWSPPEVL--LYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS------E----TVEKVSQGLRLYRPHLAS--- 227 (256)
T ss_pred cChhhCCHHHH--hcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH------H----HHHHHhcCCCCCCCCCCC---
Confidence 45679999988 45578889999999999999998 88887543221 1 111222222222222223
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
..+..++..||+.+|.+||++.+|+..|+
T Consensus 228 ----~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 228 ----EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 34566666799999999999999998764
No 83
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.61 E-value=1.6e-15 Score=101.32 Aligned_cols=99 Identities=19% Similarity=0.315 Sum_probs=68.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.|+..|+|||.+ ....++.++||||+|++++++++ |..|+....... ........+.....+...+.
T Consensus 300 ~~~~~y~aPE~~--~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~- 367 (400)
T cd05105 300 FLPVKWMAPESI--FDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS---------TFYNKIKSGYRMAKPDHATQ- 367 (400)
T ss_pred CCCcceEChhhh--cCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH---------HHHHHHhcCCCCCCCccCCH-
Confidence 356789999988 45678899999999999999986 778876432211 01222222222222232333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..++..||+.||++||++.+|.+.|+++..
T Consensus 368 ------~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 368 ------EVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred ------HHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 45566677999999999999999999987654
No 84
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.61 E-value=2e-15 Score=95.37 Aligned_cols=95 Identities=24% Similarity=0.346 Sum_probs=65.4
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+|++|++++++++ |..|+...... . .............+...+.
T Consensus 166 ~~~~~~~PE~~--~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 231 (261)
T cd05148 166 IPYKWTAPEAA--SHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH------E----VYDQITAGYRMPCPAKCPQ-- 231 (261)
T ss_pred CceEecCHHHH--ccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH------H----HHHHHHhCCcCCCCCCCCH--
Confidence 45679999987 45678889999999999999998 78888543211 1 1111111212222222333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+.+++.+||+.||.+||++.++.+.|+++
T Consensus 232 -----~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 232 -----EIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -----HHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 455666779999999999999999999863
No 85
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.61 E-value=1.3e-15 Score=97.21 Aligned_cols=98 Identities=21% Similarity=0.292 Sum_probs=67.2
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++||||+|++++|+++ +..|+...... . ....+........+...+.
T Consensus 173 ~~~~y~~PE~~--~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 238 (279)
T cd05109 173 VPIKWMALESI--LHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR------E----IPDLLEKGERLPQPPICTI-- 238 (279)
T ss_pred cchhhCCHHHh--ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH------H----HHHHHHCCCcCCCCccCCH--
Confidence 35679999988 55678899999999999999988 77887543221 1 1112222222222222233
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..++..||+.||+.||++.+++..|+++.+.
T Consensus 239 -----~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 239 -----DVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred -----HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 355666679999999999999999988877544
No 86
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.61 E-value=1.4e-15 Score=98.17 Aligned_cols=98 Identities=24% Similarity=0.350 Sum_probs=66.9
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||++ ....++.++||||+|++++++++ +..|+...... .....+........+...+.
T Consensus 201 ~~~~y~aPE~~--~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-- 266 (304)
T cd05101 201 LPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----------ELFKLLKEGHRMDKPANCTN-- 266 (304)
T ss_pred CCceeeCchhh--ccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH----------HHHHHHHcCCcCCCCCCCCH--
Confidence 45679999988 45678899999999999999998 66666433211 12222222222222222333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..++.+||+.+|++||++.+|++.|+++.+.
T Consensus 267 -----~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 267 -----ELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred -----HHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 455566669999999999999999999887643
No 87
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.61 E-value=2.7e-15 Score=95.22 Aligned_cols=97 Identities=18% Similarity=0.277 Sum_probs=66.1
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcccccc-CCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRH-GLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 81 (133)
...|+..|++||.+ ....++.++|+||+|+++|++++|..|+....... .............+ ...+
T Consensus 172 ~~~~~~~~~~Pe~~--~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd08528 172 SVVGTILYSCPEIV--KNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS----------LATKIVEAVYEPLPEGMYS 239 (269)
T ss_pred cccCcccCcChhhh--cCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH----------HHHHHhhccCCcCCcccCC
Confidence 34578899999998 45678899999999999999999999886432111 11111111111111 1223
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
. .+..++.+||+.||++||++.+|...+++
T Consensus 240 ~-------~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 240 E-------DVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred H-------HHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 3 34556666999999999999999988763
No 88
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.61 E-value=3.3e-15 Score=95.54 Aligned_cols=106 Identities=22% Similarity=0.232 Sum_probs=66.4
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCC-----CcchhhhHHHHhhhcCCccccccCCC
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTS-----STEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
++..|++||.+ ....++.++||||+|++++++++|..|+........ ......................+...
T Consensus 172 ~~~~~~~PE~~--~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (283)
T cd05080 172 SPVFWYAVECL--KENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNC 249 (283)
T ss_pred CCceeeCHhHh--cccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCC
Confidence 45569999987 456788999999999999999999988754321100 00000000011111111111112222
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
+ ..+..++..||+.+|++||++++|+..|+++.
T Consensus 250 ~-------~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 250 P-------QEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred C-------HHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2 35666677799999999999999999998764
No 89
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.61 E-value=4.9e-15 Score=96.82 Aligned_cols=43 Identities=30% Similarity=0.424 Sum_probs=38.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
..||..|+|||++ ....++.++|+||+|++++++++|+.||..
T Consensus 162 ~~g~~~y~aPE~~--~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 162 FVGTRSYMSPERL--QGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred CCCCcCcCCHhHh--cCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 4689999999998 456788999999999999999999999864
No 90
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.61 E-value=1.5e-15 Score=93.41 Aligned_cols=93 Identities=24% Similarity=0.389 Sum_probs=70.2
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc---cccccCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE---DLKRHGL 79 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 79 (133)
+++||+.||+||++ ....|+..+|||+.|++++-++.|.+||.+..... +.+.+..+. +...-..
T Consensus 171 G~~GtP~fmaPEvv--rkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r----------lye~I~~g~yd~~~~~w~~ 238 (355)
T KOG0033|consen 171 GFAGTPGYLSPEVL--KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR----------LYEQIKAGAYDYPSPEWDT 238 (355)
T ss_pred cccCCCcccCHHHh--hcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH----------HHHHHhccccCCCCcccCc
Confidence 46899999999999 67799999999999999999999999998743322 222222221 1112234
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+++...+++++|+ ..||++|.|+.|.++
T Consensus 239 is~~Ak~LvrrML-------~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 239 VTPEAKSLIRRML-------TVNPKKRITADEALK 266 (355)
T ss_pred CCHHHHHHHHHHh-------ccChhhhccHHHHhC
Confidence 6777888888854 899999999998764
No 91
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.61 E-value=2.5e-15 Score=95.14 Aligned_cols=96 Identities=22% Similarity=0.294 Sum_probs=65.9
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.. ....++.++|+||+|++++++++ +..||....... .............+..
T Consensus 165 ~~~~y~~PE~~--~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~----- 227 (262)
T cd05071 165 FPIKWTAPEAA--LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE----------VLDQVERGYRMPCPPE----- 227 (262)
T ss_pred ccceecCHhHh--ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH----------HHHHHhcCCCCCCccc-----
Confidence 45679999987 55678999999999999999999 777775432110 1111111111111111
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
....+..++..||+.||++||++.++++.|++..
T Consensus 228 --~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 228 --CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred --cCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 2235667777799999999999999999998753
No 92
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.61 E-value=5.1e-16 Score=100.23 Aligned_cols=99 Identities=18% Similarity=0.195 Sum_probs=63.0
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc--cCCCCCCCCCCCCCcchhhhHHHHhhhcCC---ccccccCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG--VRNNTASGVTHTSSTEMYFPDWFYKLLEPG---EDLKRHGL 79 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 79 (133)
.++..|+|||++ ....++.++||||+|++++++++ +..|+...... ............. .....+..
T Consensus 201 ~~~~~y~aPE~~--~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 272 (304)
T cd05096 201 VLPIRWMAWECI--LMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE------QVIENAGEFFRDQGRQVYLFRPPP 272 (304)
T ss_pred CCCccccCHHHH--hcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH------HHHHHHHHHhhhccccccccCCCC
Confidence 346789999988 45678999999999999999986 44555543211 1111111111111 01111222
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+. .+.+++.+||+.||++||++.+|.+.|++
T Consensus 273 ~~~-------~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 273 CPQ-------GLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCH-------HHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 222 45667777999999999999999988763
No 93
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.61 E-value=7.9e-16 Score=96.94 Aligned_cols=93 Identities=17% Similarity=0.228 Sum_probs=63.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|+|||++ ....++.++|+||+|++++++++|..||....... ....+..+.....+...+.
T Consensus 160 ~~~~~~~~aPE~~--~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 226 (255)
T cd08219 160 YVGTPYYVPPEIW--ENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN----------LILKVCQGSYKPLPSHYSY- 226 (255)
T ss_pred ccCCccccCHHHH--ccCCcCchhhhhhhchhheehhhccCCCCCCCHHH----------HHHHHhcCCCCCCCcccCH-
Confidence 4578889999988 45568889999999999999999999986432110 1111112222222333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
.+..++..||+.||++||++.+|+..
T Consensus 227 ------~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 227 ------ELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ------HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 34455566999999999999999864
No 94
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.60 E-value=1.2e-15 Score=93.62 Aligned_cols=100 Identities=15% Similarity=0.276 Sum_probs=67.2
Q ss_pred ccccccCccccc-cccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-cccccCCCChh
Q 040499 6 GTVSYIAPEVFC-RNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-DLKRHGLVTEE 83 (133)
Q Consensus 6 gt~~~~ape~~~-~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 83 (133)
-|..|.|||.+. ..+...+.++||||+||++|+++.+..||....... .. +.--+..+. ..+.....++
T Consensus 200 Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G--gS------laLAv~n~q~s~P~~~~yse- 270 (302)
T KOG2345|consen 200 CTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG--GS------LALAVQNAQISIPNSSRYSE- 270 (302)
T ss_pred CCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC--Ce------EEEeeeccccccCCCCCccH-
Confidence 477899999871 133467899999999999999999999997543311 11 110011110 1111112334
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+++++..|++.||.+||++.+++..++++.
T Consensus 271 ------~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 271 ------ALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ------HHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 5666666799999999999999999998765
No 95
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.60 E-value=2.8e-15 Score=96.07 Aligned_cols=94 Identities=17% Similarity=0.283 Sum_probs=63.9
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|+|||.+ ....++.++|+||+|++++++++ +..|+.+.... . ....+..+.....+...+
T Consensus 194 ~~~~y~aPE~~--~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~---------~-~~~~~~~~~~~~~~~~~~--- 258 (288)
T cd05050 194 IPIRWMPPESI--FYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE---------E-VIYYVRDGNVLSCPDNCP--- 258 (288)
T ss_pred cChhhcCHHHH--hcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---------H-HHHHHhcCCCCCCCCCCC---
Confidence 34569999987 55678899999999999999987 66676543211 1 111222222222222223
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
..+..++..||+.||++||++.+|++.|++
T Consensus 259 ----~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 259 ----LELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 345667777999999999999999998874
No 96
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.60 E-value=2.1e-15 Score=100.86 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=67.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.|+..|++||.+ ....++.++|+||+|++++|+++ +..|+....... .....+..+..+..+...+.
T Consensus 302 ~~~~~y~aPE~~--~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~---------~~~~~~~~~~~~~~p~~~~~- 369 (401)
T cd05107 302 FLPLKWMAPESI--FNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE---------QFYNAIKRGYRMAKPAHASD- 369 (401)
T ss_pred CCCCceeChHHh--cCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH---------HHHHHHHcCCCCCCCCCCCH-
Confidence 456789999988 45667889999999999999998 777775432111 01122222222222333334
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++..||+.+|..||++++|+..|+++.
T Consensus 370 ------~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 370 ------EIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred ------HHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 3455555699999999999999999998764
No 97
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=9.1e-16 Score=104.86 Aligned_cols=88 Identities=18% Similarity=0.366 Sum_probs=69.2
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
+++|||+-|||||++ .+..|+..+|+|+|||++|||+.|+.||.+..... +...+.. ..+..|...+
T Consensus 526 sTfCGTpey~aPEil--~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee----------~FdsI~~-d~~~yP~~ls 592 (694)
T KOG0694|consen 526 STFCGTPEFLAPEVL--TEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE----------VFDSIVN-DEVRYPRFLS 592 (694)
T ss_pred ccccCChhhcChhhh--ccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH----------HHHHHhc-CCCCCCCccc
Confidence 579999999999999 67899999999999999999999999998765433 2222221 1334466677
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
.+..+.+++++ .++|.+|..+
T Consensus 593 ~ea~~il~~ll-------~k~p~kRLG~ 613 (694)
T KOG0694|consen 593 KEAIAIMRRLL-------RKNPEKRLGS 613 (694)
T ss_pred HHHHHHHHHHh-------ccCcccccCC
Confidence 77777777755 9999999876
No 98
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.60 E-value=1.7e-15 Score=97.92 Aligned_cols=97 Identities=25% Similarity=0.373 Sum_probs=66.7
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|+|||.+ ....++.++|+||+|++++++++ |..|+...... .....+........+...+.
T Consensus 205 ~~~y~aPE~~--~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~----------~~~~~~~~~~~~~~~~~~~~--- 269 (307)
T cd05098 205 PVKWMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE----------ELFKLLKEGHRMDKPSNCTN--- 269 (307)
T ss_pred ccceeChHHh--ccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH----------HHHHHHHcCCCCCCCCcCCH---
Confidence 4579999987 45678899999999999999998 77777533211 02222222222222333333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..++..||+.+|++||++.+|+..|+++.+.
T Consensus 270 ----~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 270 ----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred ----HHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 444556669999999999999999999887654
No 99
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.60 E-value=5e-16 Score=99.55 Aligned_cols=44 Identities=20% Similarity=0.224 Sum_probs=38.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..||..|+|||.+ ....++.++||||+|++++++++|..||...
T Consensus 169 ~~~~~~y~aPE~~--~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 212 (290)
T cd07862 169 VVVTLWYRAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGS 212 (290)
T ss_pred ccccccccChHHH--hCCCCCCccchHHHHHHHHHHHcCCCCcCCC
Confidence 4588999999998 4567888999999999999999999998754
No 100
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.60 E-value=3.7e-15 Score=95.96 Aligned_cols=102 Identities=13% Similarity=0.162 Sum_probs=67.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||+. ....++.++||||+|++++++++|+.||...............+. ...+..+.. .....+
T Consensus 193 ~~gt~~y~ape~~--~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~-- 265 (294)
T PHA02882 193 HRGTLYYAGLDAH--NGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDF-IKRLHEGKI--KIKNAN-- 265 (294)
T ss_pred cCCCccccCHHHh--CCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHH-HHHhhhhhh--ccCCCC--
Confidence 4699999999988 566789999999999999999999999976533210000000111 111111110 111122
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
..+..++..||..+|++||++.+|++.++
T Consensus 266 -----~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 266 -----KFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred -----HHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 34555666699999999999999998763
No 101
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.60 E-value=3.4e-15 Score=95.04 Aligned_cols=92 Identities=21% Similarity=0.331 Sum_probs=62.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC-CCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL-VTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 82 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..|+....... ....+.....+..+.. .+.
T Consensus 158 ~~~~~~y~~PE~~--~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 225 (274)
T cd06609 158 FVGTPFWMAPEVI--KQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR----------VLFLIPKNNPPSLEGNKFSK 225 (274)
T ss_pred ccCCccccChhhh--ccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH----------HHHHhhhcCCCCCcccccCH
Confidence 4578889999998 44568899999999999999999999986533211 1111111112222221 233
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||..+|++||++++++.
T Consensus 226 -------~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 226 -------PFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred -------HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3445556699999999999999976
No 102
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.60 E-value=3e-15 Score=94.47 Aligned_cols=91 Identities=25% Similarity=0.428 Sum_probs=62.9
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+||+|++++++++ +..|+....... .............+...+.
T Consensus 164 ~~~y~~Pe~~--~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 228 (256)
T cd05059 164 PVKWAPPEVF--DYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE----------VVESVSAGYRLYRPKLAPT--- 228 (256)
T ss_pred CccccCHHHh--ccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH----------HHHHHHcCCcCCCCCCCCH---
Confidence 3469999988 45678889999999999999998 777876432211 1122222222222333333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHH
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEML 116 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l 116 (133)
.+..++..||+.+|++||++.+|++.|
T Consensus 229 ----~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 229 ----EVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ----HHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 455666679999999999999999876
No 103
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.60 E-value=3.5e-15 Score=93.73 Aligned_cols=92 Identities=21% Similarity=0.332 Sum_probs=63.3
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||++ ....++.++|+||+|++++++++ |..||....... ....+........+...+.
T Consensus 157 ~~~y~aPE~~--~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 221 (250)
T cd05085 157 PIKWTAPEAL--NYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ----------AREQVEKGYRMSCPQKCPD--- 221 (250)
T ss_pred cccccCHHHh--ccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH----------HHHHHHcCCCCCCCCCCCH---
Confidence 4569999988 55678889999999999999998 887875432111 1111222222222222333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.+.+++..||+.+|++||++.++++.|.
T Consensus 222 ----~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 222 ----DVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ----HHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 4555666699999999999999998875
No 104
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.60 E-value=3.2e-15 Score=94.20 Aligned_cols=93 Identities=26% Similarity=0.403 Sum_probs=63.7
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+||+|++++++++ |..|+...... . ....+..+.....+...+
T Consensus 163 ~~~~~~aPe~~--~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~--- 227 (256)
T cd05112 163 FPVKWSSPEVF--SFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS------E----VVETINAGFRLYKPRLAS--- 227 (256)
T ss_pred cchhhcCHhHh--ccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH------H----HHHHHhCCCCCCCCCCCC---
Confidence 34679999987 45678889999999999999998 77787543211 1 111122221212223223
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
..+.+++..||+.+|++||++.++++.|.
T Consensus 228 ----~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 228 ----QSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ----HHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 34666777799999999999999998774
No 105
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.60 E-value=4.7e-15 Score=93.75 Aligned_cols=94 Identities=26% Similarity=0.442 Sum_probs=64.6
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||++ ....++.++|+||+|++++++++ |..|+...... . ....+..+.....+...+.
T Consensus 165 ~~~~y~~PE~~--~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 230 (260)
T cd05073 165 FPIKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP------E----VIRALERGYRMPRPENCPE-- 230 (260)
T ss_pred ccccccCHhHh--ccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH------H----HHHHHhCCCCCCCcccCCH--
Confidence 44669999988 45678889999999999999998 88887643221 1 1122222222222222333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||+.+|++||++.+++..|+.
T Consensus 231 -----~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 231 -----ELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -----HHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 35555666999999999999999999875
No 106
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.60 E-value=4e-15 Score=93.73 Aligned_cols=95 Identities=26% Similarity=0.416 Sum_probs=66.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..++..|+|||.+ ....++.++|+||+|++++++++ |..|+....... ....+........+...+.
T Consensus 167 ~~~~~~y~aPE~~--~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 234 (262)
T cd00192 167 GKLPIRWMAPESL--KDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE----------VLEYLRKGYRLPKPEYCPD 234 (262)
T ss_pred CCcCccccCHHHh--ccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH----------HHHHHHcCCCCCCCccCCh
Confidence 3467889999987 44578899999999999999998 578876542211 2222222222233333333
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.+..++..||+.+|++||++.+++..|+
T Consensus 235 -------~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 235 -------ELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------HHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 4555666699999999999999998874
No 107
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.60 E-value=6e-15 Score=94.21 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=64.3
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc-cCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR-HGLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 81 (133)
..+||..|++||++ ....++.++|+||+|++++++++|..||........ .............. ..... ....+
T Consensus 152 ~~~~~~~y~aPE~~--~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~ 226 (279)
T cd06619 152 TYVGTNAYMAPERI--SGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQG--SLMPLQLLQCIVDE-DPPVLPVGQFS 226 (279)
T ss_pred CCCCChhhcCceee--cCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccc--ccchHHHHHHHhcc-CCCCCCCCcCC
Confidence 35688999999998 456788999999999999999999999875432211 00001111111111 11111 11123
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. .+..++..||+.+|++||++++++.
T Consensus 227 ~-------~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 227 E-------KFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred H-------HHHHHHHHHhhCChhhCCCHHHHhc
Confidence 3 3445556699999999999999875
No 108
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.59 E-value=3.9e-15 Score=93.88 Aligned_cols=96 Identities=28% Similarity=0.386 Sum_probs=65.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.++..|++||++ ....++.++|+||+|++++++++ |..|+...... .. .............+...+.
T Consensus 161 ~~~~~y~~pE~~--~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~- 228 (257)
T cd05040 161 KVPFAWCAPESL--RTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS------QI---LKKIDKEGERLERPEACPQ- 228 (257)
T ss_pred CCCceecCHHHh--cccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH------HH---HHHHHhcCCcCCCCccCCH-
Confidence 466789999987 55678889999999999999998 88887543211 11 1111111111122222233
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++..||+.+|++||++.+|+..|.+
T Consensus 229 ------~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 229 ------DIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred ------HHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 45556667999999999999999998753
No 109
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.59 E-value=1.6e-15 Score=97.51 Aligned_cols=99 Identities=18% Similarity=0.237 Sum_probs=62.7
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc--cCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc---ccccCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG--VRNNTASGVTHTSSTEMYFPDWFYKLLEPGED---LKRHGL 79 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 79 (133)
.++..|++||.+ ....++.++||||+|++++++++ +..|+..... ................ ...+..
T Consensus 193 ~~~~~y~aPE~~--~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (296)
T cd05051 193 PLPIRWMAWESV--LLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD------QQVIENAGHFFRDDGRQIYLPRPPN 264 (296)
T ss_pred CCCceecCHHHh--hcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh------HHHHHHHHhccccccccccCCCccC
Confidence 356689999987 45578899999999999999987 4556543221 1111111111111110 011111
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+ ..+.+++..||+.||++||++.+|++.|++
T Consensus 265 ~~-------~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 265 CP-------KDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred CC-------HHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 12 246667777999999999999999998863
No 110
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.59 E-value=1.9e-16 Score=114.36 Aligned_cols=96 Identities=22% Similarity=0.323 Sum_probs=74.0
Q ss_pred CCCccccccCcccccccc-CccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 3 DARGTVSYIAPEVFCRNF-GGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~-~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
+.+||+.|||||++.+.. .....+.||||+|||+.||.+|+.|+........ ++..+..+..+..|...+
T Consensus 1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a---------IMy~V~~gh~Pq~P~~ls 1467 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA---------IMYHVAAGHKPQIPERLS 1467 (1509)
T ss_pred hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH---------HHhHHhccCCCCCchhhh
Confidence 467999999999995422 3455689999999999999999999976543321 455566677777777766
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....+++.. |+..||.+|.++.|+++
T Consensus 1468 ~~g~dFle~-------Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1468 SEGRDFLEH-------CLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HhHHHHHHH-------HHhcCchhhhHHHHHHH
Confidence 665555555 99999999999988876
No 111
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.59 E-value=4.9e-15 Score=94.12 Aligned_cols=96 Identities=22% Similarity=0.308 Sum_probs=66.7
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+||+|++++++++ |..||....... ....+........+...+.
T Consensus 171 ~~~y~aPE~~--~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 235 (270)
T cd05056 171 PIKWMAPESI--NFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND----------VIGRIENGERLPMPPNCPP--- 235 (270)
T ss_pred cccccChhhh--ccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH----------HHHHHHcCCcCCCCCCCCH---
Confidence 3579999987 45678899999999999999886 888886442211 1112222222223333333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+..++.+||..+|++||++.+++..|+++..
T Consensus 236 ----~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 236 ----TLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred ----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 34455566999999999999999999987654
No 112
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.59 E-value=4.1e-15 Score=97.20 Aligned_cols=46 Identities=20% Similarity=0.207 Sum_probs=38.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.+||..|+|||++......++.++||||+|++++++++|+.||...
T Consensus 166 ~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~ 211 (338)
T cd07859 166 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 211 (338)
T ss_pred CCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 4689999999987332357888999999999999999999998654
No 113
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.59 E-value=3.2e-15 Score=94.06 Aligned_cols=92 Identities=26% Similarity=0.380 Sum_probs=62.4
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
..|+|||.+ ....++.++|+||+|++++++++ +..|+...... . .............+...+.
T Consensus 160 ~~y~aPE~~--~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~---- 223 (252)
T cd05084 160 VKWTAPEAL--NYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ------Q----TREAIEQGVRLPCPELCPD---- 223 (252)
T ss_pred eeecCchhh--cCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH------H----HHHHHHcCCCCCCcccCCH----
Confidence 459999988 55678889999999999999997 77777543211 0 1111111212222333333
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||+.+|++||++.+|++.|+.
T Consensus 224 ---~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 224 ---AVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ---HHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 45556666999999999999999998763
No 114
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.59 E-value=2.7e-16 Score=99.39 Aligned_cols=95 Identities=23% Similarity=0.366 Sum_probs=73.0
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+..||+.|||||++ ..-.|+.++||||+|+...|+..|++||....+... ...-..+.......|+.++.
T Consensus 188 TVIGTPFWMAPEVI--~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRA--------IFMIPT~PPPTF~KPE~WS~ 257 (502)
T KOG0574|consen 188 TVIGTPFWMAPEVI--EEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRA--------IFMIPTKPPPTFKKPEEWSS 257 (502)
T ss_pred ccccCcccccHHHH--HHhccchhhhHhhhcchhhhhhcCCCCcccccccce--------eEeccCCCCCCCCChHhhhh
Confidence 56799999999999 566899999999999999999999999986544220 01112223333345777777
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+.++++. |+-++|++|.++.++++
T Consensus 258 ~F~DFi~~-------CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 258 EFNDFIRS-------CLIKKPEERKTALRLCE 282 (502)
T ss_pred HHHHHHHH-------HhcCCHHHHHHHHHHhh
Confidence 77777777 99999999999998865
No 115
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.59 E-value=5.2e-15 Score=94.33 Aligned_cols=91 Identities=19% Similarity=0.285 Sum_probs=62.5
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
.|+..|++||.+ ....++.++|+||+|++++++++|..|+....... ....+.....+......+.
T Consensus 162 ~~~~~y~aPE~~--~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-- 227 (277)
T cd06642 162 VGTPFWMAPEVI--KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR----------VLFLIPKNSPPTLEGQYSK-- 227 (277)
T ss_pred cCcccccCHHHh--CcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh----------HHhhhhcCCCCCCCcccCH--
Confidence 477889999998 45578889999999999999999999876432211 1111111112122222222
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+|+.
T Consensus 228 -----~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 228 -----PFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -----HHHHHHHHHccCCcccCcCHHHHHH
Confidence 3455666699999999999999986
No 116
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.59 E-value=2.3e-15 Score=97.66 Aligned_cols=98 Identities=24% Similarity=0.412 Sum_probs=66.9
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+||+|++++++++ |..|+....... .............+...+.
T Consensus 199 ~~~y~aPE~~--~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 263 (314)
T cd05099 199 PVKWMAPEAL--FDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE----------LFKLLREGHRMDKPSNCTH--- 263 (314)
T ss_pred CccccCHHHH--ccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH----------HHHHHHcCCCCCCCCCCCH---
Confidence 3569999988 45678899999999999999998 777775432111 1222222222222332333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 123 (133)
.+..++.+||+.+|++||++.++++.|+++....
T Consensus 264 ----~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 264 ----ELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred ----HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 3445666699999999999999999998876543
No 117
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.59 E-value=4e-15 Score=94.02 Aligned_cols=94 Identities=15% Similarity=0.189 Sum_probs=61.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccC-CCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVR-NNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..|+..|++||++.. ...++.++|+||+|++++++++|. .|+...... . ....... ....+.....
T Consensus 164 ~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~------~----~~~~~~~--~~~~~~~~~~ 230 (258)
T cd05078 164 LLERIPWVPPECIEN-PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ------K----KLQFYED--RHQLPAPKWT 230 (258)
T ss_pred ccccCCccCchhccC-CCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH------H----HHHHHHc--cccCCCCCcH
Confidence 457889999998832 235788999999999999999985 444322110 0 1111111 1112222222
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.+..++..||+.||++||++++|++.|+
T Consensus 231 -------~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 231 -------ELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -------HHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 3556666699999999999999998874
No 118
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.59 E-value=6e-15 Score=92.87 Aligned_cols=92 Identities=20% Similarity=0.288 Sum_probs=62.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+||+|+++++++++..|+....... .............+...+.
T Consensus 161 ~~~~~~y~aPE~~--~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 227 (256)
T cd08220 161 VVGTPCYISPELC--EGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA----------LVLKIMSGTFAPISDRYSP- 227 (256)
T ss_pred cccCCcccCchhc--cCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH----------HHHHHHhcCCCCCCCCcCH-
Confidence 3577889999998 45567889999999999999999998876432211 1111111112222333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+++.
T Consensus 228 ------~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 228 ------DLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ------HHHHHHHHHccCChhhCCCHHHHhh
Confidence 3445556699999999999999875
No 119
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.59 E-value=5.9e-15 Score=97.47 Aligned_cols=93 Identities=24% Similarity=0.406 Sum_probs=68.8
Q ss_pred CCCCccccccCccccccccCc-cc-cccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGG-IS-HKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL 79 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~-~~-~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (133)
.+.+||+.|+|||++ .... |. .++||||+|++++.|+.|..||....... +...+..+ ....|..
T Consensus 179 ~t~cGsp~Y~aPEvl--~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~----------l~~ki~~~-~~~~p~~ 245 (370)
T KOG0583|consen 179 KTFCGSPAYAAPEVL--SGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN----------LYRKIRKG-EFKIPSY 245 (370)
T ss_pred cCCCCCcccCCHHHh--CCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH----------HHHHHhcC-CccCCCC
Confidence 578999999999999 4434 65 78999999999999999999998743221 22222222 3344555
Q ss_pred C-ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 V-TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. +..+..++.+ |+..||..|+++.+|+.
T Consensus 246 ~~S~~~~~Li~~-------mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 246 LLSPEARSLIEK-------MLVPDPSTRITLLEILE 274 (370)
T ss_pred cCCHHHHHHHHH-------HcCCCcccCCCHHHHhh
Confidence 5 6666666666 77999999999999984
No 120
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.58 E-value=4.5e-15 Score=93.53 Aligned_cols=92 Identities=20% Similarity=0.279 Sum_probs=62.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|+|||.. ....++.++|+||+|+++++++++..|+...... ..... +..+..+..+...+.
T Consensus 162 ~~~~~~y~aPE~~--~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~- 228 (257)
T cd08223 162 LIGTPYYMSPELF--SNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN---------SLVYR-IIEGKLPPMPKDYSP- 228 (257)
T ss_pred ccCCcCccChhHh--cCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---------HHHHH-HHhcCCCCCccccCH-
Confidence 4578899999988 4567788999999999999999999887643211 11111 111111122222333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.++++
T Consensus 229 ------~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 229 ------ELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ------HHHHHHHHHhccCcccCCCHHHHhc
Confidence 4556666699999999999999875
No 121
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.58 E-value=1.7e-15 Score=98.73 Aligned_cols=91 Identities=19% Similarity=0.305 Sum_probs=63.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+... ....+...+..
T Consensus 155 ~~gt~~y~aPE~~--~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~----------~~~~~~~~-~~~~p~~~~~~ 221 (323)
T cd05571 155 FCGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK----------LFELILME-EIRFPRTLSPE 221 (323)
T ss_pred eecCccccChhhh--cCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH----------HHHHHHcC-CCCCCCCCCHH
Confidence 5699999999998 55678999999999999999999999986532110 11111111 12233444554
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
..+ ++..||+.||++|| ++.++++
T Consensus 222 ~~~-------li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 222 AKS-------LLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHH-------HHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 444 44458999999999 7888874
No 122
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.58 E-value=5.7e-15 Score=93.35 Aligned_cols=93 Identities=20% Similarity=0.247 Sum_probs=62.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|+|||.+ ....++.++|+||+|++++++++|+.||...... ...............+...+..
T Consensus 167 ~~~~~~y~aPE~~--~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 235 (263)
T cd06625 167 VTGTPYWMSPEVI--SGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM---------AAIFKIATQPTNPQLPSHVSPD 235 (263)
T ss_pred CCcCccccCccee--ccCCCCchhhhHHHHHHHHHHHhCCCCccccchH---------HHHHHHhccCCCCCCCccCCHH
Confidence 4577889999998 4556889999999999999999999998643211 0011111111222233334443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. ..++..||..+|++||++.+++.
T Consensus 236 ~-------~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 236 A-------RNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred H-------HHHHHHHhhcCcccCCCHHHHhh
Confidence 3 44455599999999999999876
No 123
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.58 E-value=3.9e-15 Score=96.14 Aligned_cols=96 Identities=22% Similarity=0.333 Sum_probs=65.8
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++||||+|++++++++ +..|+...... . ....+........+...+.
T Consensus 173 ~~~~y~~PE~~--~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 238 (303)
T cd05110 173 MPIKWMALECI--HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR------E----IPDLLEKGERLPQPPICTI-- 238 (303)
T ss_pred cccccCCHHHh--ccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H----HHHHHHCCCCCCCCCCCCH--
Confidence 45689999988 55678899999999999999987 77887543211 1 1122222222222222222
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++..||..+|++||++.+|+..|+++.
T Consensus 239 -----~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 239 -----DVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred -----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3556667799999999999999999888764
No 124
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.58 E-value=5.5e-15 Score=96.67 Aligned_cols=97 Identities=25% Similarity=0.402 Sum_probs=66.8
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||++ ....++.++|+||+|++++++++ +..|+....... ....+........+...+.
T Consensus 199 ~~~y~aPE~~--~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 263 (334)
T cd05100 199 PVKWMAPEAL--FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE----------LFKLLKEGHRMDKPANCTH--- 263 (334)
T ss_pred CceEcCHHHh--ccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH----------HHHHHHcCCCCCCCCCCCH---
Confidence 4569999988 55678889999999999999998 777775432111 2222222222222222333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..++..||+.+|++||++.+|+..|+++...
T Consensus 264 ----~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 264 ----ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred ----HHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 455666669999999999999999999987744
No 125
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.58 E-value=5.8e-15 Score=93.21 Aligned_cols=92 Identities=18% Similarity=0.244 Sum_probs=64.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||++ ....++.++|+|++|++++++++|..|+...... . .......+.....+...+.
T Consensus 170 ~~~~~~~~~pE~~--~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~- 236 (265)
T cd08217 170 YVGTPYYMSPEQL--NHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL------Q----LASKIKEGKFRRIPYRYSS- 236 (265)
T ss_pred cccCCCccChhhh--cCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH------H----HHHHHhcCCCCCCccccCH-
Confidence 4678899999998 4556788999999999999999999998653211 1 2222222222223333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+|++
T Consensus 237 ------~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 237 ------ELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred ------HHHHHHHHHccCCcccCCCHHHHhh
Confidence 4556666699999999999999986
No 126
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.58 E-value=7.7e-15 Score=92.52 Aligned_cols=95 Identities=22% Similarity=0.235 Sum_probs=64.9
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+||+|++++++++ |..|+....... .............+...++
T Consensus 161 ~~~~~~ape~~--~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~-- 226 (256)
T cd05039 161 LPVKWTAPEAL--REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----------VVPHVEKGYRMEAPEGCPP-- 226 (256)
T ss_pred CcccccCchhh--cCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH----------HHHHHhcCCCCCCccCCCH--
Confidence 35679999987 45678889999999999999987 888875432111 2222222212222232333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++.+||+.+|++||++++++..|+++
T Consensus 227 -----~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 227 -----EVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -----HHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 445566669999999999999999998753
No 127
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.58 E-value=6.1e-15 Score=94.51 Aligned_cols=100 Identities=17% Similarity=0.254 Sum_probs=65.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++||||+|++++++++|..||........ .......+... ....+...+..
T Consensus 161 ~~g~~~y~aPE~~--~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~------~~~~~~~~~~~-~~~~~~~~s~~ 231 (285)
T cd05631 161 RVGTVGYMAPEVI--NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK------REEVDRRVKED-QEEYSEKFSED 231 (285)
T ss_pred CCCCCCccCHhhh--cCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh------HHHHHHHhhcc-cccCCccCCHH
Confidence 4689999999998 556789999999999999999999999976433210 00011111111 11122333443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC-----HHHHHH--HHccC
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS-----MSKAVE--MLEGG 119 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~v~~--~l~~~ 119 (133)
+..++..||+.||.+|++ ++++++ .++++
T Consensus 232 -------~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 232 -------AKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred -------HHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 344455599999999997 788876 34443
No 128
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.58 E-value=6.3e-15 Score=92.61 Aligned_cols=93 Identities=23% Similarity=0.386 Sum_probs=63.0
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+||+|++++++++ +..|+....... ....+........+...+.
T Consensus 158 ~~~y~~PE~~--~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 222 (251)
T cd05041 158 PIKWTAPEAL--NYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ----------TRERIESGYRMPAPQLCPE--- 222 (251)
T ss_pred eeccCChHhh--ccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH----------HHHHHhcCCCCCCCccCCH---
Confidence 4569999987 45678899999999999999998 677775432211 1111111111122222333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+.+++.+||+.+|++||++.+|++.|++
T Consensus 223 ----~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 223 ----EIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred ----HHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 45556666999999999999999998863
No 129
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.58 E-value=6.6e-15 Score=93.29 Aligned_cols=92 Identities=16% Similarity=0.276 Sum_probs=62.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..||....... .... ......+..+...+..
T Consensus 172 ~~~~~~y~~pe~~--~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~ 239 (267)
T cd06628 172 LQGSVFWMAPEVV--KQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ---------AIFK-IGENASPEIPSNISSE 239 (267)
T ss_pred cCCCcCccChhHh--ccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH---------HHHH-HhccCCCcCCcccCHH
Confidence 3578889999988 45677889999999999999999999986532110 0111 1112222233334443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+..++..||+.||.+||++.+|++
T Consensus 240 -------~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 240 -------AIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -------HHHHHHHHccCCchhCcCHHHHhh
Confidence 444555599999999999999875
No 130
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.58 E-value=5.6e-15 Score=93.85 Aligned_cols=95 Identities=18% Similarity=0.227 Sum_probs=61.5
Q ss_pred CCccccccCccccccc---cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 4 ARGTVSYIAPEVFCRN---FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~---~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
..|+..|++||++... ...++.++|+||+|++++++++|..|+....... . .................
T Consensus 171 ~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~--------~-~~~~~~~~~~~~~~~~~ 241 (272)
T cd06637 171 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--------A-LFLIPRNPAPRLKSKKW 241 (272)
T ss_pred ccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH--------H-HHHHhcCCCCCCCCCCc
Confidence 4688899999987321 3357889999999999999999999885432110 0 00000111111111222
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+. .+..++.+||+.+|.+||++.+|+.
T Consensus 242 ~~-------~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 242 SK-------KFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CH-------HHHHHHHHHcCCChhhCCCHHHHhh
Confidence 23 3556666799999999999999875
No 131
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.58 E-value=5.1e-15 Score=94.42 Aligned_cols=92 Identities=20% Similarity=0.282 Sum_probs=63.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..|+....... ..........+..+.
T Consensus 161 ~~~~~~y~apE~~--~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~----------~~~~~~~~~~~~~~~----- 223 (277)
T cd06640 161 FVGTPFWMAPEVI--QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR----------VLFLIPKNNPPTLTG----- 223 (277)
T ss_pred ccCcccccCHhHh--ccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh----------HhhhhhcCCCCCCch-----
Confidence 3577889999987 45567889999999999999999999886533211 111111111111111
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.....+..++..||+.+|++||++.+++.
T Consensus 224 --~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 224 --EFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred --hhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 22334556777799999999999999975
No 132
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.58 E-value=7.7e-15 Score=93.01 Aligned_cols=94 Identities=15% Similarity=0.203 Sum_probs=60.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHH-ccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV-GVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..|+..|+|||.+. ....++.++||||+|+++|+++ .+..|+....... .......... .....
T Consensus 168 ~~~~~~y~aPE~~~-~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~----------~~~~~~~~~~--~~~~~-- 232 (262)
T cd05077 168 CVERIPWIAPECVE-DSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE----------KERFYEGQCM--LVTPS-- 232 (262)
T ss_pred ccccccccChhhhc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH----------HHHHHhcCcc--CCCCC--
Confidence 35788899999873 2356788999999999999997 4666664322110 1111111100 01101
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
...+..++..||+.||.+||++.+|+..++
T Consensus 233 -----~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 233 -----CKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred -----hHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 123556677799999999999999998764
No 133
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.58 E-value=3.4e-15 Score=96.48 Aligned_cols=97 Identities=22% Similarity=0.338 Sum_probs=65.4
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++||||+|++++++++ |..|+....... .............+...+.
T Consensus 186 ~~~y~aPE~~--~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 250 (303)
T cd05088 186 PVRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----------LYEKLPQGYRLEKPLNCDD--- 250 (303)
T ss_pred cccccCHHHH--hccCCcccccchhhhhHHHHHHhcCCCCcccCChHH----------HHHHHhcCCcCCCCCCCCH---
Confidence 4569999987 45567889999999999999998 888875432211 1111111111111222223
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..++..||+.+|++||++.+++..|+.+...
T Consensus 251 ----~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 251 ----EVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred ----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 345666679999999999999999988766543
No 134
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.58 E-value=2.6e-15 Score=96.16 Aligned_cols=99 Identities=18% Similarity=0.251 Sum_probs=62.6
Q ss_pred CCccccccCcccccccc-CccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNF-GGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~-~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..|+..|++||.+.... ..++.++|+||+|++++++++|+.||..... ......... ....+..+....
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~- 236 (288)
T cd06616 167 DAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--------VFDQLTQVV-KGDPPILSNSEE- 236 (288)
T ss_pred ccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--------HHHHHhhhc-CCCCCcCCCcCC-
Confidence 35788999999883211 2578899999999999999999999864321 000111111 111111111110
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
......+..++..||+.+|++||++.+|+.
T Consensus 237 --~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 237 --REFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred --CccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112234566667799999999999999986
No 135
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.58 E-value=2.4e-14 Score=95.54 Aligned_cols=43 Identities=19% Similarity=0.332 Sum_probs=37.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
.+||+.|+|||++ ....++.++||||+|++++++++|..|+..
T Consensus 243 ~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 243 WAGTIATNAPELL--ARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred ccCccCCCChhhh--cCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 5799999999998 556789999999999999999999877643
No 136
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.58 E-value=5.7e-15 Score=94.24 Aligned_cols=97 Identities=23% Similarity=0.306 Sum_probs=68.2
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+||+|++++++++ |..|+....... ....+..+.....+...+.
T Consensus 174 ~~~y~~PE~~--~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 238 (279)
T cd05057 174 PIKWMALESI--LHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE----------IPDLLEKGERLPQPPICTI--- 238 (279)
T ss_pred cccccCHHHh--hcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH----------HHHHHhCCCCCCCCCCCCH---
Confidence 4579999987 45678889999999999999998 888886542211 2222222222223333333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..++.+||..+|++||++.+++..|+++.+.
T Consensus 239 ----~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 239 ----DVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ----HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 345566679999999999999999999887543
No 137
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=1.4e-14 Score=92.68 Aligned_cols=124 Identities=13% Similarity=0.001 Sum_probs=76.4
Q ss_pred CCCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCC-------Cc--chhhhHHH----Hhh
Q 040499 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTS-------ST--EMYFPDWF----YKL 67 (133)
Q Consensus 1 ~~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~-------~~--~~~~~~~~----~~~ 67 (133)
||..+-|.+|.|||.+. ....|+...||||.||++.|+++|++-|.+...... .+ ..+....+ ...
T Consensus 184 mTeYVaTRWYRAPElll-~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~ 262 (359)
T KOG0660|consen 184 MTEYVATRWYRAPELLL-NSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARP 262 (359)
T ss_pred hhcceeeeeecCHHHHh-ccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHH
Confidence 57788899999999873 567999999999999999999999998876533210 00 00000000 000
Q ss_pred hcCCccccccC-CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccCCCCC
Q 040499 68 LEPGEDLKRHG-LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEALQVP 126 (133)
Q Consensus 68 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~~~~~ 126 (133)
+... .+..+. .....+...-...++|...+|..||.+|+|+++.++ +|+......++|
T Consensus 263 yi~s-lp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 263 YIKS-LPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHh-CCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 0000 000111 011111112223445555577999999999999986 888888777776
No 138
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.57 E-value=5.3e-15 Score=93.89 Aligned_cols=93 Identities=17% Similarity=0.252 Sum_probs=63.6
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
..|++||.+ ....++.++||||+|++++|+++ |..|+...... . ....+........+...+.
T Consensus 175 ~~y~~PE~~--~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~------~----~~~~i~~~~~~~~~~~~~~---- 238 (269)
T cd05065 175 IRWTAPEAI--AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ------D----VINAIEQDYRLPPPMDCPT---- 238 (269)
T ss_pred eeecCHhHh--ccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH------H----HHHHHHcCCcCCCcccCCH----
Confidence 469999988 55678889999999999999886 88887643221 1 1111111111111222232
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++..||+.+|++||++.+|+..|+++
T Consensus 239 ---~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 239 ---ALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ---HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 345666679999999999999999998865
No 139
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.57 E-value=7.2e-15 Score=96.48 Aligned_cols=99 Identities=25% Similarity=0.335 Sum_probs=68.4
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+|++|++++++++ |..|+....... . ....+..+.....+...+.
T Consensus 243 ~~~~y~aPE~~--~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~-- 309 (343)
T cd05103 243 LPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-----E----FCRRLKEGTRMRAPDYTTP-- 309 (343)
T ss_pred CCcceECcHHh--cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-----H----HHHHHhccCCCCCCCCCCH--
Confidence 45679999987 45678899999999999999986 777875432110 0 1122222222222332222
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+.+++..||+.||++||++.+|++.|+.+.+.
T Consensus 310 -----~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 310 -----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred -----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 456677779999999999999999999887653
No 140
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.57 E-value=8.6e-15 Score=92.90 Aligned_cols=94 Identities=19% Similarity=0.308 Sum_probs=64.7
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+|++|++++++++ |..|+....... ....+........+...+.
T Consensus 172 ~~~y~~pe~~--~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 236 (267)
T cd05066 172 PIRWTAPEAI--AYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD----------VIKAIEEGYRLPAPMDCPA--- 236 (267)
T ss_pred ceeecCHhHh--ccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH----------HHHHHhCCCcCCCCCCCCH---
Confidence 4579999988 55678899999999999999886 888876542211 1112222212122222233
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+..++..||+.+|.+||++.++++.|+++
T Consensus 237 ----~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 237 ----ALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ----HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 345566669999999999999999998875
No 141
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.57 E-value=1.4e-14 Score=95.48 Aligned_cols=98 Identities=16% Similarity=0.250 Sum_probs=62.0
Q ss_pred CCCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC
Q 040499 3 DARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL 79 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (133)
..+||..|+|||++.. .....+.++||||||++++++++|+.||....... ... .............+..
T Consensus 227 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~------~~~-~~~~~~~~~~~~~~~~ 299 (353)
T PLN00034 227 SSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD------WAS-LMCAICMSQPPEAPAT 299 (353)
T ss_pred ccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc------HHH-HHHHHhccCCCCCCCc
Confidence 3568999999998721 11223458999999999999999999987322111 011 1111111112222233
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+. .+..++..||+.||++||++.+|++
T Consensus 300 ~~~-------~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 300 ASR-------EFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred cCH-------HHHHHHHHHccCChhhCcCHHHHhc
Confidence 333 3455556699999999999999987
No 142
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.57 E-value=3.1e-15 Score=93.35 Aligned_cols=95 Identities=20% Similarity=0.284 Sum_probs=67.8
Q ss_pred CCccccccCccccccc-cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC--C
Q 040499 4 ARGTVSYIAPEVFCRN-FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL--V 80 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~-~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 80 (133)
-.|...|||||.+... ...|+..+||||+|+.++|+.+|.-||.+....- . ....+.+..++..+.. +
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF-------e--~ltkvln~ePP~L~~~~gF 321 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDF-------E--VLTKVLNEEPPLLPGHMGF 321 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccH-------H--HHHHHHhcCCCCCCcccCc
Confidence 4578899999998543 4589999999999999999999999998755431 1 2222322333444332 4
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
++.+.+++.. ||++|+.+||...++++
T Consensus 322 Sp~F~~fv~~-------CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 322 SPDFQSFVKD-------CLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CHHHHHHHHH-------HhhcCcccCcchHHHhc
Confidence 5544444444 99999999999998875
No 143
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.57 E-value=7.7e-15 Score=99.25 Aligned_cols=93 Identities=17% Similarity=0.247 Sum_probs=71.4
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
+++.||+.|||||.+ .+..|+..+|.||+||++||+..|++||..... ......+..+.. .-|...+
T Consensus 158 tsikGtPlYmAPElv--~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si---------~~Lv~~I~~d~v--~~p~~~S 224 (808)
T KOG0597|consen 158 TSIKGTPLYMAPELV--EEQPYDHTSDLWSLGCILYELYVGQPPFYARSI---------TQLVKSILKDPV--KPPSTAS 224 (808)
T ss_pred eeccCcccccCHHHH--cCCCccchhhHHHHHHHHHHHhcCCCCchHHHH---------HHHHHHHhcCCC--CCccccc
Confidence 456799999999999 678999999999999999999999999974321 111222333322 2244667
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+.+++..++ .+||..|.+..+++.
T Consensus 225 ~~f~nfl~gLL-------~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 225 SSFVNFLQGLL-------IKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHHHh-------hcChhhcccHHHHhc
Confidence 77888888866 999999999999875
No 144
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.57 E-value=6.6e-15 Score=92.78 Aligned_cols=91 Identities=21% Similarity=0.329 Sum_probs=62.7
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
.|+..|++||+. ....++.++|+||+|++++++++|..|+...... ...... ..+..+..+...+.
T Consensus 162 ~~~~~~~~pe~~--~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~-- 227 (256)
T cd08218 162 IGTPYYLSPEIC--ENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK---------NLVLKI-IRGSYPPVSSHYSY-- 227 (256)
T ss_pred cCCccccCHHHh--CCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH---------HHHHHH-hcCCCCCCcccCCH--
Confidence 477889999987 4567788999999999999999999987643211 111111 11222222333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+|+.
T Consensus 228 -----~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 228 -----DLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -----HHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3455556699999999999999986
No 145
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.56 E-value=8.2e-15 Score=93.63 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=61.5
Q ss_pred CCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 4 ARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 4 ~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
..|+..|+|||.+.. ....++.++|+||+|++++++++|..|+....... . .................
T Consensus 181 ~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~---~------~~~~~~~~~~~~~~~~~ 251 (282)
T cd06636 181 FIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR---A------LFLIPRNPPPKLKSKKW 251 (282)
T ss_pred ccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh---h------hhhHhhCCCCCCccccc
Confidence 457889999998731 13457789999999999999999999986432211 0 10000111111111222
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+. .+..++..||+.||.+||++.+|++
T Consensus 252 ~~-------~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 252 SK-------KFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CH-------HHHHHHHHHhCCChhhCcCHHHHhc
Confidence 33 4556666799999999999999874
No 146
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.56 E-value=4e-15 Score=96.78 Aligned_cols=91 Identities=15% Similarity=0.279 Sum_probs=63.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+... ....+...+..
T Consensus 156 ~~g~~~y~aPE~~--~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~----------~~~~i~~~-~~~~~~~~~~~ 222 (318)
T cd05570 156 FCGTPDYIAPEIL--SYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE----------LFQSILED-EVRYPRWLSKE 222 (318)
T ss_pred eecCccccCHHHh--cCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH----------HHHHHHcC-CCCCCCcCCHH
Confidence 4689999999998 56678899999999999999999999986432211 11111111 11223334443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCH-----HHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSM-----SKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~v~~ 114 (133)
+..++..||+.||++||++ .+++.
T Consensus 223 -------~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 223 -------AKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred -------HHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 4445555999999999999 87764
No 147
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.56 E-value=2.9e-14 Score=93.34 Aligned_cols=43 Identities=28% Similarity=0.415 Sum_probs=37.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
..||..|+|||.+ ....++.++|+||+|++++++++|+.||..
T Consensus 162 ~~~~~~y~aPE~~--~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 162 FVGTRSYMSPERL--QGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred CCCCccccCHHHh--cCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 4688999999998 456788899999999999999999999864
No 148
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.56 E-value=3.6e-15 Score=95.99 Aligned_cols=97 Identities=18% Similarity=0.257 Sum_probs=62.1
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc--cCCCCCCCCCCCCCcchhhhHHHHhhhcC---CccccccCCCC
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG--VRNNTASGVTHTSSTEMYFPDWFYKLLEP---GEDLKRHGLVT 81 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 81 (133)
+..|++||+. ..+.++.++|+||+|++++++++ +..|+....... ........... ......+...+
T Consensus 195 ~~~~~~pe~~--~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (296)
T cd05095 195 PIRWMSWESI--LLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ------VIENTGEFFRDQGRQVYLPKPALCP 266 (296)
T ss_pred ccccCCHHHH--hcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH------HHHHHHHHHhhccccccCCCCCCCC
Confidence 5679999987 45678899999999999999997 556665432211 00001110000 00111112222
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
..+.+++.+||+.||++||++.+|.+.|++
T Consensus 267 -------~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 267 -------DSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -------HHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 356677777999999999999999998864
No 149
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.56 E-value=2e-14 Score=92.59 Aligned_cols=93 Identities=17% Similarity=0.281 Sum_probs=63.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-cccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-DLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 82 (133)
..|+..|++||.+ ....++.++|+|+||++++++++|+.||....... .......... ....+...+.
T Consensus 176 ~~~~~~y~aPE~~--~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T cd06654 176 MVGTPYWMAPEVV--TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR---------ALYLIATNGTPELQNPEKLSA 244 (296)
T ss_pred ccCCccccCHHHH--cCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH---------hHHHHhcCCCCCCCCccccCH
Confidence 4678899999988 45567889999999999999999999986543211 0111111111 1111222222
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++.+||..||++||++.+|+.
T Consensus 245 -------~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 245 -------IFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred -------HHHHHHHHHCcCCcccCcCHHHHhh
Confidence 3455666799999999999999986
No 150
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.56 E-value=1e-14 Score=91.79 Aligned_cols=92 Identities=20% Similarity=0.317 Sum_probs=61.4
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhc-CCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLE-PGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 83 (133)
.|+..|++||++ ....++.++|+|++|++++++++|..|+....... . ...... .......+...+
T Consensus 160 ~~~~~y~~PE~~--~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~-- 226 (256)
T cd06612 160 IGTPFWMAPEVI--QEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR--------A-IFMIPNKPPPTLSDPEKWS-- 226 (256)
T ss_pred cCCccccCHHHH--hcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh--------h-hhhhccCCCCCCCchhhcC--
Confidence 477889999988 45678889999999999999999999986543211 0 000000 000111111122
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+..++..||+.||++||++++|+.
T Consensus 227 -----~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 227 -----PEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred -----HHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 23555666699999999999999875
No 151
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.56 E-value=7.1e-15 Score=96.00 Aligned_cols=92 Identities=20% Similarity=0.303 Sum_probs=63.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..+||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+.. .....+...+.
T Consensus 154 ~~~gt~~y~aPE~~--~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~----------~~~~~~~-~~~~~p~~~~~ 220 (328)
T cd05593 154 TFCGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK----------LFELILM-EDIKFPRTLSA 220 (328)
T ss_pred cccCCcCccChhhh--cCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH----------HHHHhcc-CCccCCCCCCH
Confidence 35689999999998 55678899999999999999999999986532211 1111111 12223444455
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
...++ +..||+.||++|+ ++.++++
T Consensus 221 ~~~~l-------i~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 221 DAKSL-------LSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHH-------HHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 44444 4458899999997 7888875
No 152
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.56 E-value=3.7e-15 Score=96.66 Aligned_cols=91 Identities=16% Similarity=0.227 Sum_probs=62.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++||||+|++++++++|..||...... ......... ....+...+..
T Consensus 153 ~~gt~~y~aPE~~--~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~---------~~~~~~~~~--~~~~~~~~~~~ 219 (312)
T cd05585 153 FCGTPEYLAPELL--LGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN---------EMYRKILQE--PLRFPDGFDRD 219 (312)
T ss_pred ccCCcccCCHHHH--cCCCCCCccceechhHHHHHHHhCCCCcCCCCHH---------HHHHHHHcC--CCCCCCcCCHH
Confidence 5689999999998 5567889999999999999999999998653211 111111111 22233334443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC---HHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS---MSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps---~~~v~~ 114 (133)
. ..++..||+.||.+|++ +.+++.
T Consensus 220 ~-------~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 220 A-------KDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred H-------HHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 3 44455599999999985 566654
No 153
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.56 E-value=1.2e-14 Score=93.19 Aligned_cols=96 Identities=23% Similarity=0.356 Sum_probs=65.2
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+||+|++++++++ +..|+...... . .......+.....+...+.
T Consensus 183 ~~~~y~~pE~~--~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 248 (288)
T cd05061 183 LPVRWMAPESL--KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE------Q----VLKFVMDGGYLDQPDNCPE-- 248 (288)
T ss_pred ccccccCHHHh--ccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH------H----HHHHHHcCCCCCCCCCCCH--
Confidence 45679999987 45678889999999999999998 67777542211 1 1111111212222222233
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
.+..++..||+.||++||++.++++.|++..
T Consensus 249 -----~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 249 -----RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred -----HHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 4556666699999999999999999988764
No 154
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.56 E-value=3e-15 Score=97.84 Aligned_cols=97 Identities=13% Similarity=0.078 Sum_probs=63.0
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcccccc---CC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRH---GL 79 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 79 (133)
..+||..|+|||++ ....++.++||||+|++++++++|..||....... ....+.........+... ..
T Consensus 157 ~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~ 228 (333)
T cd05600 157 SVVGSPDYMAPEVL--RGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE------TWENLKYWKETLQRPVYDDPRFN 228 (333)
T ss_pred CcccCccccChhHh--cCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH------HHHHHHhccccccCCCCCccccc
Confidence 45799999999998 45688899999999999999999999986542211 000011000000000000 01
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+. .+..++..||+.+|.+||++.+++.
T Consensus 229 ~s~-------~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 229 LSD-------EAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred cCH-------HHHHHHHHHhhChhhhcCCHHHHHh
Confidence 233 3445555688999999999999986
No 155
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.56 E-value=1.5e-14 Score=91.37 Aligned_cols=94 Identities=26% Similarity=0.398 Sum_probs=64.1
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+||+|++++++++ |..||...... . ....+........+...+.
T Consensus 166 ~~~~y~~PE~~--~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 231 (261)
T cd05034 166 FPIKWTAPEAA--NYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR------E----VLEQVERGYRMPRPPNCPE-- 231 (261)
T ss_pred CCccccCHHHh--ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH------H----HHHHHHcCCCCCCCCCCCH--
Confidence 34579999987 45678889999999999999998 88887543211 1 1111221212222222333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+.+++.+||+.+|++||+++++...|+.
T Consensus 232 -----~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 232 -----ELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -----HHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 45566666999999999999999998875
No 156
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.55 E-value=1.1e-14 Score=92.48 Aligned_cols=95 Identities=23% Similarity=0.251 Sum_probs=64.4
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++||||+|++++++++ +..|+...... . .............+...+
T Consensus 177 ~~~~~~~pe~~--~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~--- 241 (273)
T cd05074 177 LPVKWLALESL--ADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS------E----IYNYLIKGNRLKQPPDCL--- 241 (273)
T ss_pred CchhhcCHhHH--hcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH------H----HHHHHHcCCcCCCCCCCC---
Confidence 34678999987 45677889999999999999998 77777543221 1 111111111111112122
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
..+.+++.+||+.+|++||++.+|+..|+++
T Consensus 242 ----~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 242 ----EDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ----HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3566677779999999999999999999865
No 157
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.55 E-value=1e-14 Score=95.29 Aligned_cols=95 Identities=16% Similarity=0.271 Sum_probs=61.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++|+||+|++++++++|..||........ .......+........ ....|...+..
T Consensus 156 ~~gt~~y~aPE~~--~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-~~~~~~~~~~~~i~~~-~~~~p~~~~~~ 231 (329)
T cd05618 156 FCGTPNYIAPEIL--RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDN-PDQNTEDYLFQVILEK-QIRIPRSLSVK 231 (329)
T ss_pred ccCCccccCHHHH--cCCCCCCccceecccHHHHHHhhCCCCCccCCCcCC-cccccHHHHHHHHhcC-CCCCCCCCCHH
Confidence 5689999999998 556788899999999999999999999864322211 1111112222222111 22234444444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
.. .++..||+.||++|+++
T Consensus 232 ~~-------~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 232 AA-------SVLKSFLNKDPKERLGC 250 (329)
T ss_pred HH-------HHHHHHhcCCHHHcCCC
Confidence 33 44455999999999984
No 158
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.55 E-value=8.4e-15 Score=95.45 Aligned_cols=92 Identities=20% Similarity=0.305 Sum_probs=63.3
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
...||..|+|||++ ....++.++|+||+|++++++++|..||....... . ....... ....+...+.
T Consensus 154 ~~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~------~---~~~~~~~--~~~~p~~~~~ 220 (323)
T cd05595 154 TFCGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER------L---FELILME--EIRFPRTLSP 220 (323)
T ss_pred cccCCcCcCCcccc--cCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH------H---HHHHhcC--CCCCCCCCCH
Confidence 35689999999998 55678899999999999999999999986542211 0 1111111 1123444455
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
...++ +..||+.||.+|+ ++.+++.
T Consensus 221 ~~~~l-------i~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 221 EAKSL-------LAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHH-------HHHHccCCHHHhCCCCCCCHHHHHc
Confidence 44444 4449999999998 7888764
No 159
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.55 E-value=5.9e-15 Score=95.93 Aligned_cols=91 Identities=16% Similarity=0.222 Sum_probs=62.3
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..+||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+... .+..+...+.
T Consensus 155 ~~~gt~~y~aPE~~--~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~----------~~~~~~~~-~~~~~~~~~~ 221 (316)
T cd05620 155 TFCGTPDYIAPEIL--QGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE----------LFESIRVD-TPHYPRWITK 221 (316)
T ss_pred ccCCCcCccCHHHH--cCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----------HHHHHHhC-CCCCCCCCCH
Confidence 35689999999998 55678899999999999999999999986532211 11111111 1222333444
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHH-HHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMS-KAV 113 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~v~ 113 (133)
... .++..||+.||++|+++. +++
T Consensus 222 ~~~-------~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 222 ESK-------DILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHH-------HHHHHHccCCHHHcCCChHHHH
Confidence 444 444559999999999974 565
No 160
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.55 E-value=8.6e-15 Score=95.42 Aligned_cols=92 Identities=16% Similarity=0.296 Sum_probs=62.4
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..+||..|+|||.+ ....++.++|+||+|++++++++|..||....... ....+... ....+...+.
T Consensus 160 ~~~g~~~y~aPE~~--~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~----------~~~~i~~~-~~~~p~~~~~ 226 (324)
T cd05589 160 TFCGTPEFLAPEVL--TETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE----------VFDSIVND-EVRYPRFLSR 226 (324)
T ss_pred ccccCccccCHhHh--cCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH----------HHHHHHhC-CCCCCCCCCH
Confidence 35689999999998 55678899999999999999999999986542211 11111111 1122333444
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
.. ..++..||+.||++|| ++.+++.
T Consensus 227 ~~-------~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 227 EA-------ISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HH-------HHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 43 3445558999999999 5666654
No 161
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.55 E-value=1.4e-14 Score=91.27 Aligned_cols=93 Identities=17% Similarity=0.291 Sum_probs=63.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..|+...... . ....+..+.....+...+.
T Consensus 161 ~~~~~~y~ape~~--~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~- 227 (256)
T cd08221 161 VVGTPYYMSPELC--QGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL---------N-LVVKIVQGNYTPVVSVYSS- 227 (256)
T ss_pred cCCCccccCHhhc--CCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH---------H-HHHHHHcCCCCCCccccCH-
Confidence 4688999999987 4456788999999999999999999888643211 0 1111111212112222333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
.+..++..||+.+|++||+++++++.
T Consensus 228 ------~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 228 ------ELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ------HHHHHHHHHcccCcccCCCHHHHhhC
Confidence 34455556999999999999999864
No 162
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.55 E-value=1.4e-15 Score=101.98 Aligned_cols=98 Identities=22% Similarity=0.323 Sum_probs=71.5
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhh-cCCccccccCCCChhHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLL-EPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 85 (133)
+.|+|||.+ ....|+.++|||||||++||+.+ |..||.+..... ....+ ..+.....+...+.
T Consensus 326 irWLAPEtl--~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~----------v~~kI~~~~~r~~~~~~~p~--- 390 (474)
T KOG0194|consen 326 IRWLAPETL--NTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE----------VKAKIVKNGYRMPIPSKTPK--- 390 (474)
T ss_pred ceecChhhh--ccCccccccchhheeeeEEeeeccCCCCCCCCCHHH----------HHHHHHhcCccCCCCCCCHH---
Confidence 679999999 66799999999999999999988 677887653321 22222 44444444443333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCCC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEALQ 124 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~~ 124 (133)
.+..++.+||..+|++||+|.++.+.++.+.....
T Consensus 391 ----~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 391 ----ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ----HHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 34444556999999999999999998887766543
No 163
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.55 E-value=5e-15 Score=96.73 Aligned_cols=91 Identities=20% Similarity=0.256 Sum_probs=62.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++||||+|++++++++|..||....... ....+..+ ....+...+..
T Consensus 175 ~~gt~~y~aPE~~--~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----------~~~~i~~~-~~~~p~~~~~~ 241 (329)
T PTZ00263 175 LCGTPEYLAPEVI--QSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR----------IYEKILAG-RLKFPNWFDGR 241 (329)
T ss_pred ecCChhhcCHHHH--cCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH----------HHHHHhcC-CcCCCCCCCHH
Confidence 4689999999998 45677899999999999999999999986432211 11222222 12234444444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC-----HHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS-----MSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~v~~ 114 (133)
.. .++..||+.||.+|++ +.+++.
T Consensus 242 ~~-------~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 242 AR-------DLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred HH-------HHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 44 4445589999999986 677764
No 164
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.55 E-value=3e-14 Score=91.85 Aligned_cols=93 Identities=18% Similarity=0.287 Sum_probs=62.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCC-ccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPG-EDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 82 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..||....... . ........ .....+...+.
T Consensus 175 ~~~~~~y~aPE~~--~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~ 243 (296)
T cd06655 175 MVGTPYWMAPEVV--TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-----A----LYLIATNGTPELQNPEKLSP 243 (296)
T ss_pred cCCCccccCcchh--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----H----HHHHHhcCCcccCCcccCCH
Confidence 3578899999988 45677889999999999999999999986532210 0 11111111 11112222333
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++.+||..||.+||++.+|+.
T Consensus 244 -------~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 244 -------IFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -------HHHHHHHHHhhcChhhCCCHHHHhh
Confidence 3444556699999999999999985
No 165
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.55 E-value=8.8e-15 Score=92.80 Aligned_cols=92 Identities=22% Similarity=0.331 Sum_probs=59.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|+|||.+ ....++.++|+||+|++++++++|+.||...... ............+..+......
T Consensus 169 ~~~~~~y~aPE~~--~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 237 (266)
T cd06651 169 VTGTPYWMSPEVI--SGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM---------AAIFKIATQPTNPQLPSHISEH 237 (266)
T ss_pred CCccccccCHHHh--CCCCCCchhhhHHHHHHHHHHHHCCCCccccchH---------HHHHHHhcCCCCCCCchhcCHH
Confidence 3477889999988 4567888999999999999999999998643211 0011111111122222222332
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...++ .||..+|++||++++|+.
T Consensus 238 ~~~li--------~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 238 ARDFL--------GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHHH--------HHhcCChhhCcCHHHHhc
Confidence 22222 488899999999999975
No 166
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.55 E-value=1.7e-14 Score=95.93 Aligned_cols=96 Identities=19% Similarity=0.242 Sum_probs=66.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC--CC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG--LV 80 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 80 (133)
+.+||..|+|||++ ....++.++||||+|++++++++|..||....... ..............+. ..
T Consensus 207 ~~~gt~~Y~aPE~~--~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~---------~~~~i~~~~~~~~~~~~~~~ 275 (381)
T cd05626 207 SLVGTPNYIAPEVL--LRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE---------TQLKVINWENTLHIPPQVKL 275 (381)
T ss_pred cccCCccccCHHHH--cCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH---------HHHHHHccccccCCCCCCCC
Confidence 35799999999998 45678899999999999999999999997543211 0111111111111222 34
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+....+++.+++ |+..++..|+++.+|+.
T Consensus 276 s~~~~dli~~ll-----~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 276 SPEAVDLITKLC-----CSAEERLGRNGADDIKA 304 (381)
T ss_pred CHHHHHHHHHHc-----cCcccccCCCCHHHHhc
Confidence 566667777655 77888888999999986
No 167
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.55 E-value=1.2e-14 Score=94.99 Aligned_cols=101 Identities=14% Similarity=0.250 Sum_probs=65.3
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.+||..|+|||++ ....++.++|+||+|++++++++|+.||........ .......+....+... ....|...+.
T Consensus 155 ~~~gt~~y~aPE~~--~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~p~~~~~ 230 (329)
T cd05588 155 TFCGTPNYIAPEIL--RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN-PDQNTEDYLFQVILEK-QIRIPRSLSV 230 (329)
T ss_pred cccCCccccCHHHH--cCCCCCCccceechHHHHHHHHHCCCCccccccccc-ccccchHHHHHHHHcC-CCCCCCCCCH
Confidence 35689999999998 556788999999999999999999999964332210 1111112222222222 2223444455
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCC------HHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSS------MSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps------~~~v~~ 114 (133)
...++ +..||+.||.+|++ +.+++.
T Consensus 231 ~~~~l-------i~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 231 KASSV-------LKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHH-------HHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 44444 44488999999997 567753
No 168
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.55 E-value=1e-14 Score=95.14 Aligned_cols=45 Identities=29% Similarity=0.457 Sum_probs=36.8
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.++..|+|||++......++.++||||+|++++++++|..||...
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 169 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred cceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 456779999998432246889999999999999999999998643
No 169
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.55 E-value=2e-14 Score=90.53 Aligned_cols=93 Identities=25% Similarity=0.353 Sum_probs=63.7
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
+..|++||.+ ....++.++|+||+|++++++++ |..|+....... .......+.....+...+.
T Consensus 160 ~~~y~~pe~~--~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--- 224 (254)
T cd05083 160 PVKWTAPEAL--KHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE----------VKECVEKGYRMEPPEGCPA--- 224 (254)
T ss_pred CceecCHHHh--ccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH----------HHHHHhCCCCCCCCCcCCH---
Confidence 4569999987 55678889999999999999997 787875432211 1112222222222222333
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||+.+|+.||++.+|+..|++
T Consensus 225 ----~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 225 ----DVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----HHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 34556666999999999999999998875
No 170
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.55 E-value=2.8e-14 Score=91.36 Aligned_cols=107 Identities=24% Similarity=0.319 Sum_probs=65.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCC-----CCcchhhhHHHHhhhcCCccccccC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHT-----SSTEMYFPDWFYKLLEPGEDLKRHG 78 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (133)
..|+..|+|||++ ....++.++|+||+|++++++++++.+........ .......................+.
T Consensus 172 ~~~~~~y~apE~~--~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (284)
T cd05079 172 LDSPVFWYAPECL--IQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPP 249 (284)
T ss_pred CCCCccccCHHHh--ccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCC
Confidence 3456679999987 45678889999999999999998765432211000 0000001111111122222222222
Q ss_pred CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 79 LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
..+. .+..++.+||+.+|++||++.+|+..++++
T Consensus 250 ~~~~-------~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 250 NCPE-------EVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCCH-------HHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 2333 466667779999999999999999998875
No 171
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.55 E-value=6.3e-15 Score=95.80 Aligned_cols=91 Identities=18% Similarity=0.210 Sum_probs=61.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+... .+..+...+..
T Consensus 156 ~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~----------~~~~i~~~-~~~~~~~~~~~ 222 (316)
T cd05619 156 FCGTPDYIAPEIL--LGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE----------LFQSIRMD-NPCYPRWLTRE 222 (316)
T ss_pred ecCCccccCHHHH--cCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH----------HHHHHHhC-CCCCCccCCHH
Confidence 4689999999998 55678899999999999999999999986532211 11111111 11223334444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHH-HHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMS-KAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~-~v~~ 114 (133)
..++ +..||+.||++|+++. +++.
T Consensus 223 ~~~l-------i~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 223 AKDI-------LVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHH-------HHHHhccCHhhcCCChHHHHc
Confidence 4444 4448899999999996 5643
No 172
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.55 E-value=1.1e-14 Score=92.15 Aligned_cols=98 Identities=20% Similarity=0.303 Sum_probs=62.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||++.. ...++.++|+||+|++++++++|+.|+....... . ........ ........ .
T Consensus 166 ~~~~~~y~~Pe~~~~-~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-----~----~~~~~~~~-~~~~~~~~--~ 232 (267)
T cd06610 166 FVGTPCWMAPEVMEQ-VHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-----V----LMLTLQND-PPSLETGA--D 232 (267)
T ss_pred ccCChhhcChHHHcc-ccCcCcccchHhHhHHHHHHHhCCCCccccChhh-----h----HHHHhcCC-CCCcCCcc--c
Confidence 357889999998732 2267889999999999999999999986543221 0 11111111 11111100 0
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.......+..++..||+.||++||++.+|+.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 233 YKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1122234556666799999999999999875
No 173
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.55 E-value=7.4e-15 Score=95.61 Aligned_cols=87 Identities=15% Similarity=0.197 Sum_probs=59.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
...||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+... ....+...+.
T Consensus 155 ~~~gt~~y~aPE~~--~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~----------~~~~i~~~-~~~~~~~~~~ 221 (320)
T cd05590 155 TFCGTPDYIAPEIL--QEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD----------LFEAILND-EVVYPTWLSQ 221 (320)
T ss_pred ccccCccccCHHHH--cCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH----------HHHHHhcC-CCCCCCCCCH
Confidence 35689999999998 55678889999999999999999999987543211 11111111 1122333444
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
... .++..||+.||.+|+++
T Consensus 222 ~~~-------~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 222 DAV-------DILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHH-------HHHHHHcccCHHHCCCC
Confidence 444 44445889999999998
No 174
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.55 E-value=1e-14 Score=96.42 Aligned_cols=45 Identities=22% Similarity=0.145 Sum_probs=39.2
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
...||..|+|||++ ....++.++||||+|++++++++|+.||...
T Consensus 184 ~~~~t~~y~aPE~~--~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 184 PYVVTRYYRAPEVI--LGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCcccCCcCCHHHH--hCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 35689999999998 5567889999999999999999999998654
No 175
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.55 E-value=3e-14 Score=90.43 Aligned_cols=96 Identities=18% Similarity=0.235 Sum_probs=62.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+......++.++|+||+|++++++++|..|+....... ...+... .....+..+.....
T Consensus 169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~- 239 (268)
T cd06624 169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ------AAMFKVG--MFKIHPEIPESLSA- 239 (268)
T ss_pred CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh------hhHhhhh--hhccCCCCCcccCH-
Confidence 34788999999874323347889999999999999999999986432211 0000110 01111222333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++.+||+.+|++||++.+|+.
T Consensus 240 ------~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 240 ------EAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ------HHHHHHHHHcCCCchhCCCHHHHHh
Confidence 3445556699999999999999875
No 176
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.54 E-value=1.4e-14 Score=95.62 Aligned_cols=41 Identities=27% Similarity=0.451 Sum_probs=34.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNT 46 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~ 46 (133)
..||..|+|||++ ....++.++|+||+|+++++++++..++
T Consensus 216 ~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 216 LAGTVETNAPEVL--ARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccccCCeec--CCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 4689999999998 5567899999999999999999865544
No 177
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.54 E-value=1.8e-14 Score=101.72 Aligned_cols=94 Identities=14% Similarity=0.162 Sum_probs=63.6
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-cccccCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-DLKRHGLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 81 (133)
.++||..|+|||++ ....++.++||||+||++||+++|..||...... ......+.... .+.......
T Consensus 539 ~~vGT~~Y~APE~l--~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~---------~~~~~il~~~~~~p~~~~~~~ 607 (669)
T cd05610 539 RILGTPDYLAPELL--LGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQ---------QVFQNILNRDIPWPEGEEKLS 607 (669)
T ss_pred ceeeCccccCHHHc--CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhcCCCCCcccccCC
Confidence 35789999999998 4567889999999999999999999998643211 11111111111 111111112
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+..++..||..||.+||++.+++.
T Consensus 608 -------~~~~~~l~~lL~~dP~~R~ta~e~l~ 633 (669)
T cd05610 608 -------VNAQNAIEILLTMDPTKRAGLKELKQ 633 (669)
T ss_pred -------HHHHHHHHHHcccChhHCcCHHHHHh
Confidence 23445555699999999999999986
No 178
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.54 E-value=8.9e-15 Score=93.66 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=38.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..||..|+|||++ ....++.++|+||+|++++++++|+.||...
T Consensus 161 ~~~~~~y~aPE~~--~~~~~~~~~DiwslGvil~el~~g~~pf~~~ 204 (287)
T cd07848 161 YVATRWYRSPELL--LGAPYGKAVDMWSVGCILGELSDGQPLFPGE 204 (287)
T ss_pred cccccccCCcHHH--cCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence 4688999999998 4567889999999999999999999998754
No 179
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.54 E-value=4.2e-14 Score=89.60 Aligned_cols=93 Identities=24% Similarity=0.310 Sum_probs=62.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhh-cCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLL-EPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..||....... . ..... .....+..+...+.
T Consensus 168 ~~~~~~~~~pe~~--~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~ 236 (265)
T cd06631 168 MHGTPYWMAPEVI--NESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA--------A-MFYIGAHRGLMPRLPDSFSA 236 (265)
T ss_pred cCCCccccChhhh--cCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH--------H-HHHhhhccCCCCCCCCCCCH
Confidence 4578899999998 45667889999999999999999999986432110 0 11111 11112222333344
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. +..++..||+.+|++||++.+++.
T Consensus 237 ~-------~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 237 A-------AIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred H-------HHHHHHHHhcCCcccCCCHHHHhc
Confidence 3 344555599999999999998874
No 180
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.54 E-value=4.1e-14 Score=90.47 Aligned_cols=103 Identities=21% Similarity=0.283 Sum_probs=63.4
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCC---Ccc---hhhhHHHHhhhcCCccccccCCCC
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTS---STE---MYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
..|++||++ ....++.++|+||+|+++++++++..+......... ... ..........+........+...+
T Consensus 175 ~~y~aPE~~--~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (284)
T cd05081 175 IFWYAPESL--TESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCP 252 (284)
T ss_pred eEeeCHHHh--ccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCC
Confidence 459999987 456788899999999999999987655432211000 000 001111112222222222222233
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
. .+..++..||+.+|++|||+.+|++.|+++
T Consensus 253 ~-------~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 253 A-------EIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred H-------HHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 3 455666669999999999999999999865
No 181
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.54 E-value=3e-14 Score=91.17 Aligned_cols=103 Identities=19% Similarity=0.269 Sum_probs=65.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCC--cchhhhHHHHhhhcCCccccccCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSS--TEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
..|+..|++||++ ....++.++|+||+|++++++++|..||......... ............... ..+..+..
T Consensus 162 ~~~~~~~~aPE~~--~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-- 236 (284)
T cd06620 162 FVGTSTYMSPERI--QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-PPPRLPSS-- 236 (284)
T ss_pred cccCcccCCHHHH--ccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-cCCCCCch--
Confidence 4688999999988 4567888999999999999999999998765432100 001111111111111 11111111
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
.....+..++..||+.||++||++.+|++.
T Consensus 237 ----~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 237 ----DFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred ----hcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 122345566667999999999999999874
No 182
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.54 E-value=1.3e-14 Score=94.39 Aligned_cols=90 Identities=16% Similarity=0.224 Sum_probs=61.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+.. ..+..+...+..
T Consensus 156 ~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~----------~~~~i~~-~~~~~~~~~~~~ 222 (316)
T cd05592 156 FCGTPDYIAPEIL--KGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE----------LFDSILN-DRPHFPRWISKE 222 (316)
T ss_pred ccCCccccCHHHH--cCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH----------HHHHHHc-CCCCCCCCCCHH
Confidence 4689999999998 55678899999999999999999999987543211 1111111 122233434444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHH-HHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMS-KAV 113 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~-~v~ 113 (133)
..+ ++..||+.||++|+++. +++
T Consensus 223 ~~~-------ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 223 AKD-------CLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHH-------HHHHHccCCHHHcCCChHHHH
Confidence 444 44459999999999875 554
No 183
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.54 E-value=3e-15 Score=93.49 Aligned_cols=98 Identities=19% Similarity=0.233 Sum_probs=66.3
Q ss_pred CCCccccccCccccc----cccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC
Q 040499 3 DARGTVSYIAPEVFC----RNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG 78 (133)
Q Consensus 3 ~~~gt~~~~ape~~~----~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (133)
..|||++|+|||.+. .....|+.-+|.|+.|++++.++.|++||++... +. +.+.+.++....
T Consensus 181 elCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--------ml--MLR~ImeGkyqF--- 247 (411)
T KOG0599|consen 181 ELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--------ML--MLRMIMEGKYQF--- 247 (411)
T ss_pred HhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--------HH--HHHHHHhccccc---
Confidence 468999999999872 2445788899999999999999999999986421 11 222222232211
Q ss_pred CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 79 LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.++...+.-...-+|+.+|++.||.+|.|+++.++
T Consensus 248 -~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 248 -RSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred -CCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 12223333333344444588999999999999875
No 184
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.54 E-value=1.8e-14 Score=92.26 Aligned_cols=44 Identities=20% Similarity=0.219 Sum_probs=37.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..||..|+|||++ ....++.++|+||+|++++++++|..+|...
T Consensus 167 ~~~~~~y~aPE~~--~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~ 210 (288)
T cd07863 167 VVVTLWYRAPEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 210 (288)
T ss_pred ccccccccCchHh--hCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence 4578899999998 4567889999999999999999998888643
No 185
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.54 E-value=1.5e-14 Score=94.26 Aligned_cols=91 Identities=19% Similarity=0.252 Sum_probs=62.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++||||+|++++++++|..||....... ....+... ....+...+..
T Consensus 160 ~~gt~~y~aPE~~--~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~----------~~~~~~~~-~~~~~~~~~~~ 226 (323)
T cd05584 160 FCGTIEYMAPEIL--MRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK----------TIDKILKG-KLNLPPYLTPE 226 (323)
T ss_pred cCCCccccChhhc--cCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH----------HHHHHHcC-CCCCCCCCCHH
Confidence 4689999999998 45567889999999999999999999986532211 11111111 12233444444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
.. .++..||+.||++|+ ++.+++.
T Consensus 227 ~~-------~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 227 AR-------DLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HH-------HHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 44 444559999999999 7887765
No 186
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.54 E-value=4.7e-14 Score=92.38 Aligned_cols=118 Identities=17% Similarity=0.105 Sum_probs=69.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc----------
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED---------- 73 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 73 (133)
..||..|+|||.+. ....++.++|+||+|++++++++|+.||...... .........+.....
T Consensus 169 ~~~~~~y~aPE~~~-~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (336)
T cd07849 169 YVATRWYRAPEIML-NSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL------HQLNLILGVLGTPSQEDLNCIISLR 241 (336)
T ss_pred cCcCCCccChHHhh-CCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHcCCCCHHHHHHhhchh
Confidence 46788999999862 2346788999999999999999999988543210 000000000000000
Q ss_pred ----c-cccCCCC----hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccCCCCCCC
Q 040499 74 ----L-KRHGLVT----EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEALQVPPK 128 (133)
Q Consensus 74 ----~-~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~~~~~~~ 128 (133)
. ..+.... .........+..++.+||+.||++||++.+++. .++.......++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~ 307 (336)
T cd07849 242 ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVA 307 (336)
T ss_pred hhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcccC
Confidence 0 0000000 000111234667777899999999999999987 47666655444443
No 187
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.54 E-value=9.7e-15 Score=93.23 Aligned_cols=95 Identities=22% Similarity=0.218 Sum_probs=60.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++|+||+|++++++++|..|+....... ............. ........+..
T Consensus 154 ~~~~~~y~aPE~~--~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~ 225 (277)
T cd05607 154 RAGTNGYMAPEIL--KEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-----AKEELKRRTLEDE-VKFEHQNFTEE 225 (277)
T ss_pred cCCCCCccCHHHH--ccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-----hHHHHHHHhhccc-cccccccCCHH
Confidence 4588999999998 45568899999999999999999999986543211 0001111111111 11111123333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAV 113 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~ 113 (133)
+..++..||+.||.+||++.+++
T Consensus 226 -------~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 226 -------SKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred -------HHHHHHHHhccCHhhCCCCccch
Confidence 44555559999999999996544
No 188
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.53 E-value=4.2e-14 Score=91.01 Aligned_cols=98 Identities=17% Similarity=0.231 Sum_probs=62.0
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc--cCCCCCCCCCCCCCcchhhhHHHHhhhc---CCccccccCCC
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG--VRNNTASGVTHTSSTEMYFPDWFYKLLE---PGEDLKRHGLV 80 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 80 (133)
++..|+|||++ ....++.++|+||+|++++++++ +..|+...... ........... .......+...
T Consensus 193 ~~~~y~aPE~~--~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (295)
T cd05097 193 LPIRWMAWESI--LLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE------QVIENTGEFFRNQGRQIYLSQTPLC 264 (295)
T ss_pred CceeecChhhh--ccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH------HHHHHHHHhhhhccccccCCCCCCC
Confidence 45689999987 45678999999999999999987 44455432211 11111111111 00011112222
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
+. .+.+++..||+.||++||++.+|++.|+.
T Consensus 265 ~~-------~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 265 PS-------PVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred CH-------HHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 33 46666677999999999999999998863
No 189
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.53 E-value=1.3e-14 Score=104.61 Aligned_cols=99 Identities=18% Similarity=0.268 Sum_probs=65.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||+.|+|||++......++.++|||||||++|++++|..||...... .. +...+....... ....+.
T Consensus 201 ~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~--------~q-li~~lk~~p~lp-i~~~S~- 269 (1021)
T PTZ00266 201 CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNF--------SQ-LISELKRGPDLP-IKGKSK- 269 (1021)
T ss_pred cCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcH--------HH-HHHHHhcCCCCC-cCCCCH-
Confidence 4689999999988433345788999999999999999999998643211 11 111222211111 111233
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccC
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGG 119 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~ 119 (133)
.+..|+..||+.+|.+||++.+++. .+...
T Consensus 270 ------eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 270 ------ELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred ------HHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 3455666699999999999999984 44433
No 190
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.53 E-value=1.3e-14 Score=93.28 Aligned_cols=91 Identities=16% Similarity=0.189 Sum_probs=62.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++||||+|++++++++|..||....... ....+... ....+...+..
T Consensus 158 ~~gt~~y~aPE~~--~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~----------~~~~i~~~-~~~~~~~~~~~ 224 (291)
T cd05612 158 LCGTPEYLAPEVI--QSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG----------IYEKILAG-KLEFPRHLDLY 224 (291)
T ss_pred ccCChhhcCHHHH--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----------HHHHHHhC-CcCCCccCCHH
Confidence 4689999999998 45678899999999999999999999986542211 11111111 11223334444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC-----HHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS-----MSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~v~~ 114 (133)
..+ ++..||+.||.+|++ +++++.
T Consensus 225 ~~~-------li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 225 AKD-------LIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHH-------HHHHHcCCCHHHccCCccCCHHHHhc
Confidence 444 444588999999995 888875
No 191
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.53 E-value=1.5e-14 Score=91.83 Aligned_cols=97 Identities=19% Similarity=0.245 Sum_probs=59.2
Q ss_pred CccccccCcccccccc-----CccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC
Q 040499 5 RGTVSYIAPEVFCRNF-----GGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG 78 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~-----~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (133)
.|+..|+|||++.... ..++.++|+||+|++++++++ |..||....... ...... .........+.
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~------~~~~~~--~~~~~~~~~~~ 234 (269)
T cd05087 163 WVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ------VLTYTV--REQQLKLPKPR 234 (269)
T ss_pred CCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH------HHHHHh--hcccCCCCCCc
Confidence 4667899999873211 135779999999999999986 888886432211 000000 01111111111
Q ss_pred ---CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 79 ---LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 79 ---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
..+. .+..++..|| .+|++||++++|+..|+
T Consensus 235 ~~~~~~~-------~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 235 LKLPLSD-------RWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCCh-------HHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1122 3445566698 58999999999998875
No 192
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.53 E-value=1.2e-14 Score=94.56 Aligned_cols=92 Identities=16% Similarity=0.235 Sum_probs=62.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..+||..|+|||++ ....++.++|+||+|++++++++|+.||....... ....+... ....+...+.
T Consensus 155 ~~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~----------~~~~i~~~-~~~~p~~~~~ 221 (321)
T cd05591 155 TFCGTPDYIAPEIL--QELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD----------LFESILHD-DVLYPVWLSK 221 (321)
T ss_pred ccccCccccCHHHH--cCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH----------HHHHHHcC-CCCCCCCCCH
Confidence 35689999999998 45678899999999999999999999997543211 11111111 1122333344
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCC-------CHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRS-------SMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rp-------s~~~v~~ 114 (133)
.. ..++..||+.||++|+ ++.+++.
T Consensus 222 ~~-------~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 222 EA-------VSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HH-------HHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 33 3444558899999999 7777764
No 193
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.53 E-value=2.4e-14 Score=90.22 Aligned_cols=91 Identities=18% Similarity=0.275 Sum_probs=61.9
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
.|+..|+|||.. ....++.++|+||+|++++++++|..|+...... .......... ........+.
T Consensus 163 ~~~~~~~ape~~--~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~-- 228 (257)
T cd08225 163 VGTPYYLSPEIC--QNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH---------QLVLKICQGY-FAPISPNFSR-- 228 (257)
T ss_pred CCCccccCHHHH--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH---------HHHHHHhccc-CCCCCCCCCH--
Confidence 478889999987 4557888999999999999999999988643211 1122222111 1111222233
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++.+||+.+|++||++.+|++
T Consensus 229 -----~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 229 -----DLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -----HHHHHHHHHhccChhhCcCHHHHhh
Confidence 3555566699999999999999975
No 194
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.53 E-value=4.4e-14 Score=90.12 Aligned_cols=92 Identities=20% Similarity=0.276 Sum_probs=62.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..|+....... ..........+..+...+.
T Consensus 161 ~~~~~~y~~PE~~--~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 227 (277)
T cd06641 161 FVGTPFWMAPEVI--KQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK----------VLFLIPKNNPPTLEGNYSK- 227 (277)
T ss_pred ccCCccccChhhh--ccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH----------HHHHHhcCCCCCCCcccCH-
Confidence 3578889999987 45567889999999999999999999886432211 1111111222222222333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+++.
T Consensus 228 ------~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 228 ------PLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ------HHHHHHHHHccCChhhCcCHHHHHh
Confidence 3445556699999999999999987
No 195
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.53 E-value=1e-13 Score=91.59 Aligned_cols=44 Identities=27% Similarity=0.169 Sum_probs=38.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..||..|+|||++ ....++.++||||+|++++++++|..||...
T Consensus 182 ~~~t~~y~aPE~~--~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 182 YVVTRYYRAPEVI--LGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CcccCCCCCchhc--cCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 4688999999998 5567889999999999999999999998754
No 196
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.52 E-value=1.3e-14 Score=94.49 Aligned_cols=87 Identities=16% Similarity=0.300 Sum_probs=59.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..+||+.|+|||++ ....++.++|+||+|++++++++|..||....... ....+... ....+...+.
T Consensus 160 ~~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~----------~~~~i~~~-~~~~p~~~s~ 226 (323)
T cd05616 160 TFCGTPDYIAPEII--AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE----------LFQSIMEH-NVAYPKSMSK 226 (323)
T ss_pred cCCCChhhcCHHHh--cCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH----------HHHHHHhC-CCCCCCcCCH
Confidence 35689999999998 55678999999999999999999999987542211 11111111 1122334444
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
.. ..++..|++.||++|++.
T Consensus 227 ~~-------~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 227 EA-------VAICKGLMTKHPGKRLGC 246 (323)
T ss_pred HH-------HHHHHHHcccCHHhcCCC
Confidence 44 444455889999999984
No 197
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.52 E-value=1.3e-14 Score=101.73 Aligned_cols=96 Identities=23% Similarity=0.348 Sum_probs=75.7
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
+.|||-|.+ ....|+.++|||+|||++||+++ |..|+.+..... +...++.+.....|...+-
T Consensus 864 ikwmale~i--~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e----------I~dlle~geRLsqPpiCti---- 927 (1177)
T KOG1025|consen 864 IKWMALESI--RIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE----------IPDLLEKGERLSQPPICTI---- 927 (1177)
T ss_pred cHHHHHHHh--hccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH----------hhHHHhccccCCCCCCccH----
Confidence 578999988 67799999999999999999988 888988765543 5556666666666665554
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..+|..||..|++.||.++++...+.++.+.
T Consensus 928 ---DVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 928 ---DVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ---HHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 456666779999999999999999877766544
No 198
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.52 E-value=2.5e-14 Score=91.67 Aligned_cols=92 Identities=17% Similarity=0.205 Sum_probs=62.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc--cCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR--HGLVT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 81 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..|+....... ............. +...+
T Consensus 175 ~~~~~~y~aPE~~--~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 242 (285)
T cd06648 175 LVGTPYWMAPEVI--SRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ----------AMKRIRDNLPPKLKNLHKVS 242 (285)
T ss_pred ccCCccccCHHHh--cCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH----------HHHHHHhcCCCCCcccccCC
Confidence 3578899999987 45568889999999999999999999986432110 1111111111111 11122
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. .+..++.+||+.+|++||++.+++.
T Consensus 243 ~-------~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 243 P-------RLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred H-------HHHHHHHHHcccChhhCcCHHHHcc
Confidence 2 4566666799999999999999985
No 199
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.52 E-value=5e-14 Score=90.08 Aligned_cols=95 Identities=14% Similarity=0.185 Sum_probs=62.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++|+||+|++++++++|..||....... ............ ....+...+..
T Consensus 157 ~~g~~~y~aPE~~--~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~ 227 (280)
T cd05608 157 YAGTPGFMAPELL--QGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-----ENKELKQRILND--SVTYPDKFSPA 227 (280)
T ss_pred cCCCcCccCHHHh--cCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-----hHHHHHHhhccc--CCCCcccCCHH
Confidence 4688999999998 55678899999999999999999999986543211 000111111111 11223333443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
. ..++..||+.||++|+ +++++++
T Consensus 228 ~-------~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 228 S-------KSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred H-------HHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 3 4444558999999999 6777775
No 200
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.52 E-value=3.1e-14 Score=92.39 Aligned_cols=46 Identities=20% Similarity=0.188 Sum_probs=38.1
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
...||..|+|||++.+ ...++.++|+||+|++++++++|..||...
T Consensus 174 ~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 174 PVVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CccccccccCCHHHcC-CCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 3568899999998732 245788999999999999999999998654
No 201
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.52 E-value=6.4e-14 Score=89.56 Aligned_cols=95 Identities=18% Similarity=0.240 Sum_probs=61.4
Q ss_pred CCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhc-CCccccccCC
Q 040499 4 ARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLE-PGEDLKRHGL 79 (133)
Q Consensus 4 ~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 79 (133)
..|+..|++||++.. ....++.++|+||+|++++++++|..|+....... . ...... .......+..
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~------~---~~~~~~~~~~~~~~~~~ 233 (282)
T cd06643 163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR------V---LLKIAKSEPPTLAQPSR 233 (282)
T ss_pred ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH------H---HHHHhhcCCCCCCCccc
Confidence 457889999998721 22356779999999999999999999886532211 0 111111 1111112222
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+. .+..++..||+.||++||++.++++
T Consensus 234 ~~~-------~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 234 WSS-------EFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred cCH-------HHHHHHHHHccCChhhCcCHHHHhc
Confidence 333 3445556699999999999999875
No 202
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.52 E-value=2.9e-14 Score=90.07 Aligned_cols=112 Identities=14% Similarity=0.130 Sum_probs=68.2
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCc-----chhhhHHHHhhhcCCc----
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSST-----EMYFPDWFYKLLEPGE---- 72 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---- 72 (133)
|.++.|.||.|||.+-+ .-+|...+|||++||++.|+++|.+-|.+...-+... -..+............
T Consensus 159 TDYVATRWYRaPELLvG-DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~G 237 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVG-DTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHG 237 (396)
T ss_pred hhhhhhhhccChhhhcc-cCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceee
Confidence 45678999999998722 2589999999999999999999988665432211000 0000000111111110
Q ss_pred ----cccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 73 ----DLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 73 ----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++............++.++..|++.||++|+++++++.
T Consensus 238 v~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 238 VRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 001111112223333446788899999999999999999874
No 203
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.52 E-value=6e-14 Score=89.38 Aligned_cols=94 Identities=17% Similarity=0.221 Sum_probs=61.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|+|||.+. ....++.++|+||+|++++++++|..|+....... ..........+..+..
T Consensus 161 ~~~~~~y~aPE~~~-~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~---- 225 (277)
T cd06917 161 FVGTPYWMAPEVIT-EGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR----------AMMLIPKSKPPRLEDN---- 225 (277)
T ss_pred ccCCcceeCHHHhc-cCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh----------hhhccccCCCCCCCcc----
Confidence 45788899999873 13356889999999999999999999986542211 1111111111111111
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.....+..++..||+.||++||++.+++.
T Consensus 226 --~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 226 --GYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred --cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 01224556666799999999999999976
No 204
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.52 E-value=1e-13 Score=94.13 Aligned_cols=42 Identities=24% Similarity=0.289 Sum_probs=36.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTA 47 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~ 47 (133)
..||..|++||++ ....++.++||||+|+++||++.+..++.
T Consensus 322 ~~GT~~Y~APE~~--~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 322 IAGTVDTNAPEVL--AGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred cCCCcCCcCHHHH--cCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 4699999999998 55678899999999999999998776543
No 205
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.52 E-value=4.1e-14 Score=92.38 Aligned_cols=94 Identities=16% Similarity=0.333 Sum_probs=61.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.+||..|+|||++ ....++.++|+||+|++++++++|..||........ .............. ....+...+.
T Consensus 155 ~~~gt~~y~aPE~~--~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~~~-~~~~p~~~~~ 228 (327)
T cd05617 155 TFCGTPNYIAPEIL--RGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD---MNTEDYLFQVILEK-PIRIPRFLSV 228 (327)
T ss_pred cccCCcccCCHHHH--CCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc---cccHHHHHHHHHhC-CCCCCCCCCH
Confidence 35689999999998 556788999999999999999999999965332211 11111222222111 2233444555
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
...+++.+ ||+.||++|+++
T Consensus 229 ~~~~li~~-------~L~~dP~~R~~~ 248 (327)
T cd05617 229 KASHVLKG-------FLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHH-------HhccCHHHcCCC
Confidence 44444444 889999999984
No 206
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.52 E-value=4.4e-15 Score=96.80 Aligned_cols=92 Identities=18% Similarity=0.303 Sum_probs=63.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
...||..|+|||++ ....++.++|+||+|++++++++|..||....... ...... ......+...+.
T Consensus 155 ~~~gt~~y~aPE~~--~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~----------~~~~i~-~~~~~~p~~~~~ 221 (325)
T cd05594 155 TFCGTPEYLAPEVL--EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK----------LFELIL-MEEIRFPRTLSP 221 (325)
T ss_pred cccCCcccCCHHHH--ccCCCCCccccccccceeeeeccCCCCCCCCCHHH----------HHHHHh-cCCCCCCCCCCH
Confidence 35689999999998 55678899999999999999999999986532211 111111 112223444455
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
...+ ++..||+.||++|+ ++.+++.
T Consensus 222 ~~~~-------li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 222 EAKS-------LLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHH-------HHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 4444 44458899999997 8888874
No 207
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.52 E-value=1e-13 Score=88.88 Aligned_cols=95 Identities=16% Similarity=0.193 Sum_probs=63.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+|+..|++||.+ ....++.++|+||+|++++++++|..||....... ........+... ....+...+.
T Consensus 161 ~~~~~~y~aPE~~--~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~- 230 (285)
T cd05605 161 RVGTVGYMAPEVV--KNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV------KREEVERRVKED-QEEYSEKFSE- 230 (285)
T ss_pred ccCCCCccCcHHh--cCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh------HHHHHHHHhhhc-ccccCcccCH-
Confidence 4688999999998 45678889999999999999999999987543211 000111111111 1112222333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
.+..++..||+.||++|| ++++++.
T Consensus 231 ------~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 231 ------AARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred ------HHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 344555669999999999 8888864
No 208
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.51 E-value=4.1e-14 Score=89.05 Aligned_cols=92 Identities=25% Similarity=0.409 Sum_probs=62.7
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
++..|++||.+ ....++.++|+|++|++++++++ +..|+...... . .............+...+.
T Consensus 166 ~~~~y~~Pe~~--~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~-- 231 (258)
T smart00219 166 LPIRWMAPESL--KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE------E----VLEYLKKGYRLPKPENCPP-- 231 (258)
T ss_pred CcccccChHHh--ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH------H----HHHHHhcCCCCCCCCcCCH--
Confidence 56789999987 55678899999999999999998 66776542111 1 1222222222222333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHH
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEML 116 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l 116 (133)
.+..++.+||..||++||++.+++..|
T Consensus 232 -----~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 232 -----EIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----HHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 455566679999999999999998764
No 209
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.51 E-value=3.9e-14 Score=95.87 Aligned_cols=110 Identities=13% Similarity=0.092 Sum_probs=65.4
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCC-----------
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPG----------- 71 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 71 (133)
+..||..|+|||++.+ ...++.++||||+|++++++++|..||.+..... ....+...+...
T Consensus 229 ~~~~t~~y~aPE~~~~-~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~------~~~~i~~~~~~p~~~~~~~~~~~ 301 (440)
T PTZ00036 229 SYICSRFYRAPELMLG-ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD------QLVRIIQVLGTPTEDQLKEMNPN 301 (440)
T ss_pred cCCCCcCccCHHHhcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHHHhCCCCHHHHHHhchh
Confidence 3568899999998732 2468899999999999999999999987543211 000011000000
Q ss_pred -ccccccCCCChhHHH-----HHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccC
Q 040499 72 -EDLKRHGLVTEEEEV-----IVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGG 119 (133)
Q Consensus 72 -~~~~~~~~~~~~~~~-----~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~ 119 (133)
.....+......... ....+..|+..||++||.+|+++.+++. .++.+
T Consensus 302 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 302 YADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred hhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 000001100011100 1124556667799999999999999984 44443
No 210
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.51 E-value=6.4e-14 Score=91.96 Aligned_cols=46 Identities=20% Similarity=0.266 Sum_probs=38.3
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
+.+||..|+|||++.. ...++.++||||+|++++++++|..||...
T Consensus 174 ~~~~t~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~ 219 (343)
T cd07878 174 GYVATRWYRAPEIMLN-WMHYNQTVDIWSVGCIMAELLKGKALFPGN 219 (343)
T ss_pred CccccccccCchHhcC-CccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence 4578999999998732 246788999999999999999999988643
No 211
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.51 E-value=1.7e-14 Score=95.33 Aligned_cols=119 Identities=13% Similarity=0.133 Sum_probs=80.7
Q ss_pred CCccccccCcccccccc----CccccccchhhhhHHHHHHHccCCCCCC-C-------CCCCCCcchhhhHHHHhhhcCC
Q 040499 4 ARGTVSYIAPEVFCRNF----GGISHKSDVYGFGMTVLELVGVRNNTAS-G-------VTHTSSTEMYFPDWFYKLLEPG 71 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~----~~~~~~~dv~s~g~~~~~l~~~~~p~~~-~-------~~~~~~~~~~~~~~~~~~~~~~ 71 (133)
-+||..|||||++.+.- ...-...||||+|.++||++++..-... . +....+....+.+.....+.++
T Consensus 378 qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK 457 (534)
T KOG3653|consen 378 QVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKK 457 (534)
T ss_pred hhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhc
Confidence 57999999999983210 1122468999999999999987654431 1 1111223333334334444555
Q ss_pred ccccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCCC
Q 040499 72 EDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEALQ 124 (133)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~~ 124 (133)
..+..+..+..+ ..+..+...++.||..|++.|.|+..+.+++.++.....
T Consensus 458 ~RP~~p~~W~~h--~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 458 QRPKIPDAWRKH--AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred cCCCChhhhhcC--ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 566666655544 456678899999999999999999999998887766543
No 212
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.51 E-value=3.7e-14 Score=92.67 Aligned_cols=96 Identities=20% Similarity=0.248 Sum_probs=62.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++.. ...++.++||||+|++++++++|..||....... . .......+.. ..+..+...+..
T Consensus 166 ~~gt~~y~aPE~~~~-~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~----~~~~~~~~~~-~~~~~~~~~~~~ 237 (332)
T cd05614 166 FCGTIEYMAPEIIRG-KGGHGKAVDWWSLGILIFELLTGASPFTLEGERN--T----QSEVSRRILK-CDPPFPSFIGPE 237 (332)
T ss_pred ccCCccccCHHHhcC-CCCCCCccccccchhhhhhhhcCCCCCCCCCCCC--C----HHHHHHHHhc-CCCCCCCCCCHH
Confidence 468999999999832 2346788999999999999999999986543221 0 0111111111 112233344454
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
..+ ++..||+.||++|+ ++.++++
T Consensus 238 ~~~-------li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 238 AQD-------LLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred HHH-------HHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 444 44459999999999 6777764
No 213
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.51 E-value=6.5e-14 Score=88.31 Aligned_cols=94 Identities=17% Similarity=0.253 Sum_probs=61.4
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHcc-CCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGV-RNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.++..|++||++......++.++|+||+|+++++++++ ..|+....... ........... +....
T Consensus 165 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~----------~~~~~~~~~~~--~~~~~-- 230 (259)
T cd05037 165 VERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE----------KERFYQDQHRL--PMPDC-- 230 (259)
T ss_pred ccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh----------HHHHHhcCCCC--CCCCc--
Confidence 46778999999832223678899999999999999984 55554432110 11111111111 11111
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
..+..++..||+.+|.+||++.+|++.|+
T Consensus 231 -----~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 231 -----AELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -----hHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 35667777799999999999999998774
No 214
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=3e-14 Score=94.27 Aligned_cols=106 Identities=18% Similarity=0.155 Sum_probs=70.8
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc---------
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE--------- 72 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 72 (133)
|.++.|.||.|||++.+ .+-|+.+.|+|++||++.|+.+-++-|.+..+ .+..-.+...+-...
T Consensus 167 TeYVSTRWYRAPEvLLr-s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE------~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 167 TEYVSTRWYRAPEVLLR-SGYYSSPVDMWAVGCIMAELYSLRPLFPGASE------IDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred chhhhcccccchHHhhh-ccccCCchHHHHHHHHHHHHHHhcccCCCCcH------HHHHHHHHHHhCCCccccchhHHH
Confidence 45788999999999853 57899999999999999999887776655432 111222222221110
Q ss_pred ---------cccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 73 ---------DLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 73 ---------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+...+........++...+.+|+.+|+.-||++||++.+.++
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 111122222333345556778888899999999999999886
No 215
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.51 E-value=5.2e-14 Score=91.24 Aligned_cols=105 Identities=19% Similarity=0.287 Sum_probs=62.5
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhh----hcCCc--------
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKL----LEPGE-------- 72 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------- 72 (133)
.++..|+|||++......++.++|+||+|++++++++|..||........ ........ +....
T Consensus 169 ~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (314)
T cd08216 169 VKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-----LLEKVRGTVPCLLDKSTYPLYEDSM 243 (314)
T ss_pred cccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHHHhccCccccccCchhhhcCCc
Confidence 46778999998743234578899999999999999999999875322110 00000000 00000
Q ss_pred --------cccccC-CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 73 --------DLKRHG-LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 73 --------~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...... ............+..++..||+.||++||+++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 244 SQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred CcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000000 000011122235667788899999999999999986
No 216
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.51 E-value=1e-13 Score=88.76 Aligned_cols=95 Identities=20% Similarity=0.264 Sum_probs=62.0
Q ss_pred CCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc--ccccC
Q 040499 4 ARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED--LKRHG 78 (133)
Q Consensus 4 ~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 78 (133)
..|+..|+|||++.. ....++.++|+||+|++++++++|+.|+....... . ... ...... ...+.
T Consensus 184 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~--------~-~~~-~~~~~~~~~~~~~ 253 (286)
T cd06638 184 SVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR--------A-LFK-IPRNPPPTLHQPE 253 (286)
T ss_pred ccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH--------H-Hhh-ccccCCCcccCCC
Confidence 358889999998731 12357789999999999999999999986542211 0 111 111111 11122
Q ss_pred CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 79 LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
..+. .+..++..||+.||++||++.+|++.
T Consensus 254 ~~~~-------~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 254 LWSN-------EFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CcCH-------HHHHHHHHHccCCcccCCCHHHHhhc
Confidence 2222 35556667999999999999999864
No 217
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.51 E-value=6.9e-14 Score=89.22 Aligned_cols=93 Identities=18% Similarity=0.260 Sum_probs=61.7
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHH-ccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELV-GVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.|+..|++||.+.. ...++.++|+||||+++++++ .+..|+....... ........ ...+.....
T Consensus 181 ~~~~~~~aPe~~~~-~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~----------~~~~~~~~--~~~~~~~~~- 246 (274)
T cd05076 181 VERIPWIAPECVPG-GNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE----------KERFYEKK--HRLPEPSCK- 246 (274)
T ss_pred ccCCcccCchhhcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH----------HHHHHHhc--cCCCCCCCh-
Confidence 46788999998732 246789999999999999984 6777776432211 11111111 111111122
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.+..++..||+.+|++||++.+|++.|.
T Consensus 247 ------~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 247 ------ELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred ------HHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 3556667799999999999999998763
No 218
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.51 E-value=5.7e-14 Score=89.67 Aligned_cols=105 Identities=23% Similarity=0.348 Sum_probs=66.6
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCC-----cchhhhHHHHhhhcCCccccccCCC
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSS-----TEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
++..|++||.+ ....++.++|+||+|++++++++|..|+......... ............+........+...
T Consensus 174 ~~~~~~~Pe~~--~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (284)
T cd05038 174 SPIFWYAPECL--RTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSC 251 (284)
T ss_pred CcccccCcHHH--ccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccC
Confidence 34569999987 4557888999999999999999998886543221100 0000111111222222111112222
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
+ ..+..++.+||+.+|++||++.+|+..|+++
T Consensus 252 ~-------~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 252 P-------DEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred C-------HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 2 3466677779999999999999999999875
No 219
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.51 E-value=3.2e-14 Score=90.45 Aligned_cols=99 Identities=22% Similarity=0.296 Sum_probs=61.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+......++.++|+||+|++++++++|..|+...... .. .............+....
T Consensus 170 ~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~-- 238 (272)
T cd06629 170 MQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI--------AA-MFKLGNKRSAPPIPPDVS-- 238 (272)
T ss_pred ccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH--------HH-HHHhhccccCCcCCcccc--
Confidence 3578889999987322224788999999999999999999988532111 00 111111111111111110
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
......+..++..||+.+|++||++.+|+.
T Consensus 239 -~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 239 -MNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred -ccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 112234455556699999999999999875
No 220
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.51 E-value=3e-14 Score=90.33 Aligned_cols=99 Identities=16% Similarity=0.220 Sum_probs=61.0
Q ss_pred CCccccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..|+..|++||.+.. ....++.++|+||+|++++++++|..|+........ ................
T Consensus 166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~---------~~~~~~~~~~~~~~~~--- 233 (267)
T cd06646 166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA---------LFLMSKSNFQPPKLKD--- 233 (267)
T ss_pred cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh---------heeeecCCCCCCCCcc---
Confidence 457889999998732 133467889999999999999999998754322110 0000000000000000
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
.......+.+++..||+.+|++||++++|++.
T Consensus 234 -~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 234 -KTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred -ccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00112345566667999999999999998864
No 221
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.50 E-value=4.8e-14 Score=91.22 Aligned_cols=95 Identities=22% Similarity=0.263 Sum_probs=62.1
Q ss_pred CCccccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..|+..|+|||++.. ....++.++|||+||+++|++++|..|+....... ..............+..
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~--- 238 (307)
T cd06607 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---------ALYHIAQNDSPTLSSND--- 238 (307)
T ss_pred ccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH---------HHHHHhcCCCCCCCchh---
Confidence 457889999998731 23467889999999999999999999886432110 01111111111111111
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....+..++..||+.+|++||++.+|+.
T Consensus 239 ----~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 239 ----WSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ----hCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 2234566667799999999999999976
No 222
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.50 E-value=3.7e-14 Score=91.26 Aligned_cols=92 Identities=15% Similarity=0.186 Sum_probs=61.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc--cCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR--HGLVT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 81 (133)
..|+..|+|||.+ ....++.++|+||+|++++++++|..|+....... ............. ....+
T Consensus 178 ~~~~~~y~aPE~~--~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 245 (292)
T cd06658 178 LVGTPYWMAPEVI--SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ----------AMRRIRDNLPPRVKDSHKVS 245 (292)
T ss_pred eecCccccCHHHH--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----------HHHHHHhcCCCccccccccC
Confidence 3578899999988 55678889999999999999999999986432110 1111111111111 11123
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.. +..++..||+.||++||++.++++
T Consensus 246 ~~-------~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 246 SV-------LRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred HH-------HHHHHHHHccCChhHCcCHHHHhh
Confidence 32 334445599999999999999986
No 223
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.50 E-value=8.3e-14 Score=91.83 Aligned_cols=44 Identities=25% Similarity=0.190 Sum_probs=38.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..||..|+|||++ ....++.++|+||+|++++++++|+.||.+.
T Consensus 178 ~~~t~~y~aPE~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 178 YVVTRYYRAPEVI--LGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred ccccCCccCHHHH--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 4689999999998 4567889999999999999999999998654
No 224
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.50 E-value=2.5e-14 Score=93.92 Aligned_cols=92 Identities=17% Similarity=0.236 Sum_probs=63.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.+||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+..+ ....+...+.
T Consensus 187 ~~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~----------~~~~i~~~-~~~~p~~~~~ 253 (340)
T PTZ00426 187 TLCGTPEYIAPEIL--LNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL----------IYQKILEG-IIYFPKFLDN 253 (340)
T ss_pred eecCChhhcCHHHH--hCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH----------HHHHHhcC-CCCCCCCCCH
Confidence 35689999999998 45667889999999999999999999987532210 11112211 1123444455
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
...+++++ |++.||.+|+ +++++++
T Consensus 254 ~~~~li~~-------~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 254 NCKHLMKK-------LLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred HHHHHHHH-------HcccCHHHcCCCCCCCHHHHHc
Confidence 44444444 8899999995 8888875
No 225
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.50 E-value=1.6e-13 Score=87.89 Aligned_cols=97 Identities=19% Similarity=0.256 Sum_probs=62.2
Q ss_pred CCccccccCccccccc----cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC
Q 040499 4 ARGTVSYIAPEVFCRN----FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL 79 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~----~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (133)
..|+..|++||.+... ...++.++|+||+|++++++++|..||....... ... .............+..
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~------~~~-~~~~~~~~~~~~~~~~ 233 (286)
T cd06622 161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN------IFA-QLSAIVDGDPPTLPSG 233 (286)
T ss_pred CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh------HHH-HHHHHhhcCCCCCCcc
Confidence 3577889999987321 1235788999999999999999999986532211 000 1111112222233333
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+.... .++..||+.+|++||++.+++.
T Consensus 234 ~~~~~~-------~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 234 YSDDAQ-------DFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred cCHHHH-------HHHHHHcccCcccCCCHHHHhc
Confidence 444443 4445599999999999999986
No 226
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.50 E-value=1.4e-13 Score=91.97 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=39.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGV 50 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~ 50 (133)
.+||..|+|||++ ....++.++||||+|++++++++|+.|+.+..
T Consensus 247 ~~gt~~y~aPE~~--~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 247 WSGTLETNSPELL--ALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred cccccCccCHhHh--cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 4689999999998 55678899999999999999999999987643
No 227
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.50 E-value=7.2e-14 Score=90.50 Aligned_cols=96 Identities=23% Similarity=0.295 Sum_probs=62.3
Q ss_pred CCccccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..|+..|++||.+.. ....++.++||||+|++++++++|..|+....... ..................+.
T Consensus 171 ~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 241 (308)
T cd06634 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---------ALYHIAQNESPALQSGHWSE 241 (308)
T ss_pred ccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH---------HHHHHhhcCCCCcCcccccH
Confidence 467889999998631 23457789999999999999999998876432110 01111111111111112222
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
.+..++.+||+.+|++||++.+|+..
T Consensus 242 -------~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 242 -------YFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred -------HHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 34556666999999999999999864
No 228
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.50 E-value=1.5e-14 Score=94.27 Aligned_cols=90 Identities=19% Similarity=0.202 Sum_probs=60.8
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..+||..|+|||++ ....++.++||||+|++++++++|..||....... ....+... ....+...+.
T Consensus 155 ~~~gt~~y~aPE~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----------~~~~i~~~-~~~~~~~~~~ 221 (325)
T cd05602 155 TFCGTPEYLAPEVL--HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----------MYDNILNK-PLQLKPNITN 221 (325)
T ss_pred cccCCccccCHHHH--cCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH----------HHHHHHhC-CcCCCCCCCH
Confidence 35689999999998 55678899999999999999999999986532211 11111111 1112223444
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKA 112 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v 112 (133)
...+++. .||+.||.+|+++.+.
T Consensus 222 ~~~~li~-------~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 222 SARHLLE-------GLLQKDRTKRLGAKDD 244 (325)
T ss_pred HHHHHHH-------HHcccCHHHCCCCCCC
Confidence 4444444 4889999999987643
No 229
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.49 E-value=1.4e-13 Score=88.70 Aligned_cols=92 Identities=20% Similarity=0.263 Sum_probs=61.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc--ccccCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED--LKRHGLVT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 81 (133)
..|+..|++||++ ....++.++|+||+|++++++++|+.|+....... ....+..... .......+
T Consensus 177 ~~~~~~y~aPE~~--~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 244 (297)
T cd06659 177 LVGTPYWMAPEVI--SRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQ----------AMKRLRDSPPPKLKNAHKIS 244 (297)
T ss_pred eecCccccCHHHH--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----------HHHHHhccCCCCccccCCCC
Confidence 4578899999998 45577889999999999999999999986432110 1111111111 11112223
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.. +..++..||+.+|++||++++|++
T Consensus 245 ~~-------l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 245 PV-------LRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred HH-------HHHHHHHHhcCCcccCcCHHHHhh
Confidence 33 444555699999999999999987
No 230
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.49 E-value=3.4e-14 Score=92.60 Aligned_cols=86 Identities=16% Similarity=0.303 Sum_probs=59.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++|+||+|++++++++|+.||....... ....+... ....+...+..
T Consensus 161 ~~gt~~y~aPE~~--~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~----------~~~~i~~~-~~~~~~~~~~~ 227 (324)
T cd05587 161 FCGTPDYIAPEII--AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE----------LFQSIMEH-NVSYPKSLSKE 227 (324)
T ss_pred ecCCccccChhhh--cCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----------HHHHHHcC-CCCCCCCCCHH
Confidence 4689999999998 55678899999999999999999999986542211 11111111 11223334443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
. ..++..||+.||.+|++.
T Consensus 228 ~-------~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 228 A-------VSICKGLLTKHPAKRLGC 246 (324)
T ss_pred H-------HHHHHHHhhcCHHHcCCC
Confidence 3 444455899999999976
No 231
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.49 E-value=5.5e-14 Score=91.23 Aligned_cols=93 Identities=19% Similarity=0.210 Sum_probs=62.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
+.||..|++||++ ....++.++|+||+|++++++++|..||....... . .................+.
T Consensus 192 ~~g~~~y~aPE~~--~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~- 259 (316)
T cd05574 192 FVGTEEYIAPEVI--SGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE-----T----FSNILKKEVTFPGSPPVSS- 259 (316)
T ss_pred CcCccCCcCHHHH--cCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH-----H----HHHHhcCCccCCCccccCH-
Confidence 4688899999998 45677889999999999999999999986433211 0 1111111111111111233
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC----HHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS----MSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps----~~~v~~ 114 (133)
.+..++..||+.||++||+ +.+++.
T Consensus 260 ------~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 260 ------SARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ------HHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 4555666699999999999 888876
No 232
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.49 E-value=9.9e-14 Score=91.76 Aligned_cols=95 Identities=20% Similarity=0.274 Sum_probs=62.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC--CCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG--LVT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 81 (133)
.+||..|+|||++ ....++.++|+||+|++++++++|..||....... . .............+. ..+
T Consensus 196 ~~Gt~~Y~aPE~~--~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~------~---~~~i~~~~~~~~~p~~~~~s 264 (363)
T cd05628 196 TVGTPDYIAPEVF--MQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQE------T---YKKVMNWKETLIFPPEVPIS 264 (363)
T ss_pred ccCCccccCHHHH--cCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHH------H---HHHHHcCcCcccCCCcCCCC
Confidence 5799999999998 55678899999999999999999999997543211 0 111111111111222 235
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....+++.+++ |...++..||++++|++
T Consensus 265 ~~~~~li~~l~-----~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 265 EKAKDLILRFC-----CEWEHRIGAPGVEEIKT 292 (363)
T ss_pred HHHHHHHHHHc-----CChhhcCCCCCHHHHhC
Confidence 55556655543 55556667899999986
No 233
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.49 E-value=2.9e-14 Score=89.63 Aligned_cols=84 Identities=19% Similarity=0.364 Sum_probs=66.2
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.|||+-|+|||++ ....|+..+|.|++|++.+||+.|.+||....+.. +...+.++ ....|...+.
T Consensus 200 TlCGTPeYLAPEii--~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~----------iY~KI~~~-~v~fP~~fs~ 266 (355)
T KOG0616|consen 200 TLCGTPEYLAPEII--QSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ----------IYEKILEG-KVKFPSYFSS 266 (355)
T ss_pred EecCCccccChHHh--hcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH----------HHHHHHhC-cccCCcccCH
Confidence 47899999999999 67899999999999999999999999998654421 44444333 3345777888
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCC
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDR 106 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~R 106 (133)
...++++.++ +.|-.+|
T Consensus 267 ~~kdLl~~LL-------~vD~t~R 283 (355)
T KOG0616|consen 267 DAKDLLKKLL-------QVDLTKR 283 (355)
T ss_pred HHHHHHHHHH-------hhhhHhh
Confidence 8888888876 7776666
No 234
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.49 E-value=7.8e-14 Score=88.14 Aligned_cols=92 Identities=17% Similarity=0.254 Sum_probs=62.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.. ....++.++|+|++|+++++++++..|+...... . .......+..+..+...+.
T Consensus 165 ~~~~~~~~~pe~~--~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~- 231 (260)
T cd08222 165 FTGTPYYMSPEAL--KHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL---------S-VVLRIVEGPTPSLPETYSR- 231 (260)
T ss_pred CCCCcCccCHHHH--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH---------H-HHHHHHcCCCCCCcchhcH-
Confidence 4577889999987 4456788999999999999999999887532110 1 1111111222222332333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+++.
T Consensus 232 ------~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 232 ------QLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ------HHHHHHHHHhcCChhhCcCHHHHhh
Confidence 4455666699999999999999875
No 235
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.49 E-value=1.7e-13 Score=86.73 Aligned_cols=98 Identities=20% Similarity=0.225 Sum_probs=63.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..|+....... .......... .....+..+..
T Consensus 159 ~~~~~~y~~PE~~--~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~---- 227 (265)
T cd06605 159 FVGTSSYMAPERI--QGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP----DGIFELLQYI-VNEPPPRLPSG---- 227 (265)
T ss_pred ccCChhccCHHHH--cCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc----ccHHHHHHHH-hcCCCCCCChh----
Confidence 3577889999988 45678899999999999999999999986542211 0011111111 11111112211
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.....+..++..||..||++||++.+++.
T Consensus 228 --~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 228 --KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred --hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 02223556666699999999999999875
No 236
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.49 E-value=3.1e-14 Score=102.32 Aligned_cols=90 Identities=23% Similarity=0.247 Sum_probs=59.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||.+|+|||++ ....++.++|||||||+++|++++..++..... .+....... . +....
T Consensus 175 ~~gt~~Y~APE~~--~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-------~~~~~~~~~-----~---~~~~~-- 235 (793)
T PLN00181 175 AMEMSWYTSPEED--NGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-------TMSSLRHRV-----L---PPQIL-- 235 (793)
T ss_pred cCCCcceEChhhh--ccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-------HHHHHHHhh-----c---Chhhh--
Confidence 4688999999998 566789999999999999999987666432110 000111000 0 11000
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
........++..||+.+|.+||++.+|++
T Consensus 236 --~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 236 --LNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred --hcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 01122345566799999999999999975
No 237
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.49 E-value=1.5e-13 Score=86.92 Aligned_cols=95 Identities=19% Similarity=0.326 Sum_probs=60.9
Q ss_pred CCccccccCcccccccc-CccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC--
Q 040499 4 ARGTVSYIAPEVFCRNF-GGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV-- 80 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~-~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 80 (133)
..|+..|++||++.... ..++.++|+|++|++++++++|..||...... ... ... ......+..+...
T Consensus 163 ~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~------~~~--~~~-~~~~~~~~~~~~~~~ 233 (264)
T cd06626 163 LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE------FQI--MFH-VGAGHKPPIPDSLQL 233 (264)
T ss_pred CcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch------HHH--HHH-HhcCCCCCCCccccc
Confidence 45778999999983221 23788999999999999999999998643211 000 111 1112122222211
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+. .+..++..||+.+|.+||++.+++.
T Consensus 234 ~~-------~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 234 SP-------EGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CH-------HHHHHHHHHccCCcccCCCHHHHhc
Confidence 33 3345555699999999999999874
No 238
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.49 E-value=9.9e-14 Score=90.19 Aligned_cols=97 Identities=21% Similarity=0.284 Sum_probs=63.5
Q ss_pred CCccccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..|+..|++||.+.. ....++.++|+||+|++++++++|..|+....... ..................+.
T Consensus 181 ~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 251 (317)
T cd06635 181 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---------ALYHIAQNESPTLQSNEWSD 251 (317)
T ss_pred ccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH---------HHHHHHhccCCCCCCccccH
Confidence 457889999998621 23467889999999999999999999876432110 01111111111111122222
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEML 116 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l 116 (133)
.+..++..||+.+|.+||++.+|+..+
T Consensus 252 -------~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 252 -------YFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -------HHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 355566679999999999999998744
No 239
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.49 E-value=3.9e-14 Score=94.72 Aligned_cols=95 Identities=20% Similarity=0.293 Sum_probs=63.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.+||+-|+|||++ .+..|+..+|+||+||+++|++.|-+||.+..... .-..+..|...+. .......+.
T Consensus 347 StVGTPDYiAPEVl--l~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~--T~rkI~nwr~~l~-----fP~~~~~s~ 417 (550)
T KOG0605|consen 347 STVGTPDYIAPEVL--LGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQE--TYRKIVNWRETLK-----FPEEVDLSD 417 (550)
T ss_pred cccCCccccchHHH--hcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhhhcc-----CCCcCcccH
Confidence 36899999999999 56779999999999999999999999998765532 1112222222111 111122345
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCC---HHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSS---MSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps---~~~v~~ 114 (133)
+..+++.+ |+. ||++|.. +.||.+
T Consensus 418 eA~DLI~r-------ll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 418 EAKDLITR-------LLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHHH-------Hhc-CHHHhcCcccHHHHhc
Confidence 55555555 445 8999975 666654
No 240
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.49 E-value=8.7e-14 Score=89.23 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=62.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++|+||+|++++++++|..||....... .. ......... .....+...+..
T Consensus 161 ~~g~~~y~aPE~~--~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~----~~~~~~~~~-~~~~~~~~~~~~ 231 (285)
T cd05630 161 RVGTVGYMAPEVV--KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KR----EEVERLVKE-VQEEYSEKFSPD 231 (285)
T ss_pred CCCCccccChHHH--cCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hH----HHHHhhhhh-hhhhcCccCCHH
Confidence 4688999999998 55678899999999999999999999997542211 00 001111111 011112223333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC-----HHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS-----MSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~v~~ 114 (133)
+..++..||+.||.+|++ +.+++.
T Consensus 232 -------~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 232 -------ARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -------HHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 445555599999999999 788876
No 241
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.49 E-value=1.5e-13 Score=89.21 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=37.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..||..|+|||++.+ ...++.++||||+|++++++++|..||...
T Consensus 175 ~~~t~~y~aPE~~~~-~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 175 VVVTFWYRAPELLLG-ARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceecccccCcHHhcC-CCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 467889999998732 245788999999999999999999998643
No 242
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.49 E-value=9.1e-14 Score=87.46 Aligned_cols=91 Identities=20% Similarity=0.238 Sum_probs=63.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
.|+..|++||.+ ....++.++|+|++|++++++++|..|+....... .............+...+
T Consensus 162 ~~~~~~~~Pe~~--~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~--- 226 (256)
T cd08530 162 IGTPHYMAPEVW--KGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD----------LRYKVQRGKYPPIPPIYS--- 226 (256)
T ss_pred cCCccccCHHHH--CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----------HHHHHhcCCCCCCchhhC---
Confidence 477899999998 45677889999999999999999999986542211 111112222222222222
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+..++..||+.+|++||++.++++
T Consensus 227 ----~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 227 ----QDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ----HHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 34566666799999999999999875
No 243
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.49 E-value=1.1e-13 Score=88.85 Aligned_cols=94 Identities=19% Similarity=0.207 Sum_probs=60.8
Q ss_pred CCccccccCccccccc---cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcccc--ccC
Q 040499 4 ARGTVSYIAPEVFCRN---FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLK--RHG 78 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~---~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 78 (133)
..|+..|++||++... ...++.++|+||+|++++++++|..|+....... .... ........ .+.
T Consensus 188 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~---------~~~~-~~~~~~~~~~~~~ 257 (291)
T cd06639 188 SVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK---------TLFK-IPRNPPPTLLHPE 257 (291)
T ss_pred ccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH---------HHHH-HhcCCCCCCCccc
Confidence 3577889999987321 1136789999999999999999999986532211 0111 11111111 111
Q ss_pred CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 79 LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
... ..+..++..||+.+|++||++.++++
T Consensus 258 ~~~-------~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 258 KWC-------RSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred ccC-------HHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 112 24566677799999999999999875
No 244
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.48 E-value=1e-13 Score=87.17 Aligned_cols=92 Identities=17% Similarity=0.253 Sum_probs=63.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.. ....++.++|+|++|++++++++|..|+....... .............+...+.
T Consensus 163 ~~~~~~y~~pe~~--~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~- 229 (258)
T cd08215 163 VVGTPYYLSPELC--QNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE----------LALKILKGQYPPIPSQYSS- 229 (258)
T ss_pred eeeeecccChhHh--ccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH----------HHHHHhcCCCCCCCCCCCH-
Confidence 3577889999987 45668889999999999999999998886442211 1111122222223333344
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++.+||+.+|++||++.+++.
T Consensus 230 ------~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 230 ------ELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ------HHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3445555699999999999999875
No 245
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.48 E-value=1.1e-13 Score=87.39 Aligned_cols=96 Identities=19% Similarity=0.293 Sum_probs=61.9
Q ss_pred CCccccccCccccccccC---ccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 4 ARGTVSYIAPEVFCRNFG---GISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~---~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
..|+..|++||.+ ... .++.++|+||+|++++++++|+.|+....... . ............ . .
T Consensus 161 ~~~~~~y~~Pe~~--~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~--------~-~~~~~~~~~~~~--~-~ 226 (262)
T cd06613 161 FIGTPYWMAPEVA--AVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR--------A-LFLISKSNFPPP--K-L 226 (262)
T ss_pred ccCCccccCchhh--cccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--------H-HHHHHhccCCCc--c-c
Confidence 4577889999987 333 67889999999999999999999986532110 0 111111100000 0 0
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.........+..++.+||+.+|.+||++++|+.
T Consensus 227 -~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 -KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 011112234667777899999999999999874
No 246
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=6.7e-14 Score=92.07 Aligned_cols=115 Identities=18% Similarity=0.193 Sum_probs=80.1
Q ss_pred CCCccccccCccccccc--cCccc--cccchhhhhHHHHHHHcc----------CCCCCCCCCCCCCcchhhhHHHHhhh
Q 040499 3 DARGTVSYIAPEVFCRN--FGGIS--HKSDVYGFGMTVLELVGV----------RNNTASGVTHTSSTEMYFPDWFYKLL 68 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~--~~~~~--~~~dv~s~g~~~~~l~~~----------~~p~~~~~~~~~~~~~~~~~~~~~~~ 68 (133)
.-+||-.|||||++... ...|. ..+||||||.++||+..+ +.||....+.+ ..+.+......
T Consensus 379 ~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D----Ps~eeMrkVVC 454 (513)
T KOG2052|consen 379 PRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD----PSFEEMRKVVC 454 (513)
T ss_pred CccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC----CCHHHHhccee
Confidence 35799999999998321 11222 468999999999998743 35666655433 33333333333
Q ss_pred cCCccccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCC
Q 040499 69 EPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEAL 123 (133)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~ 123 (133)
.+...+..|..+... ..++.+.++|..||..+|+.|.++-.|.+.|.++.+..
T Consensus 455 v~~~RP~ipnrW~s~--~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ 507 (513)
T KOG2052|consen 455 VQKLRPNIPNRWKSD--PALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD 507 (513)
T ss_pred ecccCCCCCcccccC--HHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence 444455555555433 56778999999999999999999999999998887643
No 247
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.48 E-value=8.7e-14 Score=87.64 Aligned_cols=93 Identities=24% Similarity=0.304 Sum_probs=61.8
Q ss_pred CCccccccCccccccccCc-cccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGG-ISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~-~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..|+..|++||.+ .... ++.++|+|++|++++++++|..|+...... ...............+...+.
T Consensus 161 ~~~~~~y~~pe~~--~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 229 (258)
T cd06632 161 FKGSPYWMAPEVI--AQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV---------AAVFKIGRSKELPPIPDHLSD 229 (258)
T ss_pred cCCCcceeCHHHh--cCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH---------HHHHHHHhcccCCCcCCCcCH
Confidence 4578889999987 3334 788999999999999999999998654311 011111111112222333344
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. +..++..||+.+|++||++.+++.
T Consensus 230 ~-------~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 230 E-------AKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred H-------HHHHHHHHhhcCcccCcCHHHHhc
Confidence 3 344555599999999999999874
No 248
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.48 E-value=4.4e-14 Score=98.65 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=66.9
Q ss_pred cccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
|+.|.+||++.. .+...+.|+|||++||++|.|+....||+..+...+ +...+ ........+.
T Consensus 218 Tp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI---------lng~Y----~~P~~p~ys~--- 281 (738)
T KOG1989|consen 218 TPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI---------LNGNY----SFPPFPNYSD--- 281 (738)
T ss_pred CccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE---------Eeccc----cCCCCccHHH---
Confidence 678999999843 234678999999999999999999999987644321 11111 1111112233
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
.+..|+..||+.||++||++-+|+..+.++...
T Consensus 282 ----~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 282 ----RLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ----HHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 344445558899999999999999888776544
No 249
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.48 E-value=1.3e-13 Score=90.06 Aligned_cols=44 Identities=27% Similarity=0.464 Sum_probs=35.7
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
++..|++||++......++.++|+||+|++++++++|..||...
T Consensus 170 ~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 170 SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred CccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 45569999998432245788999999999999999999998654
No 250
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.48 E-value=3.3e-14 Score=93.43 Aligned_cols=92 Identities=23% Similarity=0.241 Sum_probs=61.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC--CC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL--VT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 81 (133)
..||..|+|||++ ....++.++||||+|++++++++|..||....... ..............+.. .+
T Consensus 190 ~~gt~~y~aPE~~--~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~---------~~~~i~~~~~~~~~p~~~~~~ 258 (350)
T cd05573 190 TVGTPDYIAPEVL--RGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE---------TYNKIINWKESLRFPPDPPVS 258 (350)
T ss_pred cccCccccCHHHH--cCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH---------HHHHHhccCCcccCCCCCCCC
Confidence 4689999999998 55688999999999999999999999987543211 01111110111111211 24
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCC-HHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSS-MSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~~v~~ 114 (133)
.. +..++..|+. ||.+|++ +++++.
T Consensus 259 ~~-------~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 259 PE-------AIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred HH-------HHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 43 3344445887 9999999 999986
No 251
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.48 E-value=2e-13 Score=86.49 Aligned_cols=96 Identities=18% Similarity=0.323 Sum_probs=62.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..|+....... .................+...+.
T Consensus 168 ~~~~~~~~~PE~~--~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~- 238 (268)
T cd06630 168 LLGTIAFMAPEVL--RGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN------HLALIFKIASATTAPSIPEHLSP- 238 (268)
T ss_pred cccccceeCHhHh--ccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc------hHHHHHHHhccCCCCCCchhhCH-
Confidence 3577889999987 45677889999999999999999999885432211 00111111111111122222223
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.++++
T Consensus 239 ------~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 239 ------GLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ------HHHHHHHHHcCCCcccCcCHHHHhc
Confidence 4455666699999999999999874
No 252
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.48 E-value=1e-13 Score=88.80 Aligned_cols=92 Identities=17% Similarity=0.243 Sum_probs=61.4
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccc-cccCCCChh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDL-KRHGLVTEE 83 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 83 (133)
.|+..|++||.+ ....++.++|+|++|++++++++|..|+....... ............ ..+...+
T Consensus 177 ~~~~~y~~PE~~--~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-- 243 (286)
T cd06614 177 VGTPYWMAPEVI--KRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR---------ALFLITTKGIPPLKNPEKWS-- 243 (286)
T ss_pred cCCcccCCHhHh--cCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHHHhcCCCCCcchhhCC--
Confidence 467889999987 45567899999999999999999999986432210 011111111110 0111122
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+..++..||+.+|.+||++.+|+.
T Consensus 244 -----~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 244 -----PEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -----HHHHHHHHHHhccChhhCcCHHHHhh
Confidence 24556667799999999999999985
No 253
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.48 E-value=1.2e-13 Score=88.15 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=62.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhh-----------hcCC-
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKL-----------LEPG- 71 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~- 71 (133)
..|+..|++||.+. ....++.++|+||+|+++++++++..||....... ........ ....
T Consensus 158 ~~~~~~y~aPE~~~-~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 158 YISTRWYRAPECLL-TDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD------QIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred CCCCcccCChhHhh-cCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH------HHHHHHHHcCCCCHHHHHhhcccc
Confidence 35788899999762 23456789999999999999999998886532210 00111100 0000
Q ss_pred -ccccccCCCChh----HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 72 -EDLKRHGLVTEE----EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 72 -~~~~~~~~~~~~----~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.....+...... .......+..++..||+.+|++||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000011111100 1122345777778899999999999999875
No 254
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.48 E-value=1.1e-13 Score=87.93 Aligned_cols=96 Identities=22% Similarity=0.257 Sum_probs=61.4
Q ss_pred CCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 4 ARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 4 ~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
..|+..|+|||.+.. ....++.++|+|++|++++++++|..|+....... . .... .........
T Consensus 173 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-----~----~~~~-~~~~~~~~~--- 239 (275)
T cd06608 173 FIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-----A----LFKI-PRNPPPTLK--- 239 (275)
T ss_pred ccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-----H----HHHh-hccCCCCCC---
Confidence 357888999998732 12356788999999999999999999986432211 0 1111 111111110
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. .......+..++.+||..||++||++.+|+.
T Consensus 240 ~--~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 240 S--PENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred c--hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 0112234556677799999999999999875
No 255
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.48 E-value=2.6e-13 Score=86.73 Aligned_cols=102 Identities=18% Similarity=0.103 Sum_probs=63.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-----------c
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-----------D 73 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 73 (133)
.++..|++||++ ....++.++|+||+|+++++++++..++....... ............. .
T Consensus 167 ~~~~~~~~PE~~--~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 167 VVTLWYRAPEVL--LQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD------QLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred cccccccChHHh--ccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH------HHHHHHHHcCCCChHhcCCCcccch
Confidence 467789999998 45677889999999999999999988876432211 0000111000000 0
Q ss_pred ccccC----CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 74 LKRHG----LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 74 ~~~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...+. ............+.+++..||+.||++||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000 011112223345667888899999999999999874
No 256
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.48 E-value=1.2e-13 Score=87.54 Aligned_cols=95 Identities=19% Similarity=0.257 Sum_probs=60.3
Q ss_pred CCccccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc-cccc--CC
Q 040499 4 ARGTVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED-LKRH--GL 79 (133)
Q Consensus 4 ~~gt~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~ 79 (133)
..|+..|+|||++.. ....++.++|+||+|+++++++++..|+....... . .......... .... ..
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~ 236 (267)
T cd06645 166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----A-----LFLMTKSNFQPPKLKDKMK 236 (267)
T ss_pred ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh----h-----HHhhhccCCCCCcccccCC
Confidence 468899999998621 13457889999999999999999998875432211 0 1100011100 0000 11
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+. .+..++..||+.+|++||++++|++
T Consensus 237 ~~~-------~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 237 WSN-------SFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred CCH-------HHHHHHHHHccCCchhCcCHHHHhc
Confidence 222 3445566699999999999999875
No 257
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.48 E-value=7.5e-14 Score=85.40 Aligned_cols=93 Identities=19% Similarity=0.317 Sum_probs=73.6
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
++.|||.-|.+||++ ....++..+|+|++|+..+|++-|.+||....... ....+.. .....|..++
T Consensus 180 ~tlcgt~dyl~pEmv--~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e----------tYkrI~k-~~~~~p~~is 246 (281)
T KOG0580|consen 180 KTLCGTLDYLPPEMV--EGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE----------TYKRIRK-VDLKFPSTIS 246 (281)
T ss_pred eeeecccccCCHhhc--CCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH----------HHHHHHH-ccccCCcccC
Confidence 468999999999999 67788999999999999999999999998654221 3332222 2334467778
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...++++.+ |+.++|.+|.+..+++.
T Consensus 247 ~~a~dlI~~-------ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 247 GGAADLISR-------LLVKNPIERLALTEVMD 272 (281)
T ss_pred hhHHHHHHH-------HhccCccccccHHHHhh
Confidence 888888777 77999999999999986
No 258
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.48 E-value=1e-13 Score=89.40 Aligned_cols=93 Identities=18% Similarity=0.301 Sum_probs=62.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-cccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-DLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 82 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..||........ .......+. ....+...+.
T Consensus 175 ~~~~~~y~aPE~~--~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 243 (297)
T cd06656 175 MVGTPYWMAPEVV--TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---------LYLIATNGTPELQNPERLSA 243 (297)
T ss_pred ccCCccccCHHHH--cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh---------eeeeccCCCCCCCCccccCH
Confidence 3578899999988 456678899999999999999999999865432110 000011111 1111222233
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+|+.
T Consensus 244 -------~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 244 -------VFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred -------HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3445556699999999999999987
No 259
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.48 E-value=3.3e-14 Score=92.40 Aligned_cols=48 Identities=19% Similarity=0.267 Sum_probs=43.1
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVT 51 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~ 51 (133)
.+.||++.|||||++ ...+|+-|+|+||+|+++|++++|+.||.....
T Consensus 172 ~tlcGSplYMAPEV~--~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 172 ETLCGSPLYMAPEVI--MSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred HHhhCCccccCHHHH--HhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 367999999999999 678999999999999999999999999986543
No 260
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.47 E-value=1.4e-14 Score=98.29 Aligned_cols=101 Identities=16% Similarity=0.214 Sum_probs=67.7
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHc--cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG--VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
.+.|||+|.+ .-++++.++|+|+||+++||+++ ...||....... ..+......... .... .....
T Consensus 702 piRwmawEsi--llgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~------vven~~~~~~~~-~~~~---~l~~P 769 (807)
T KOG1094|consen 702 PIRWMAWESI--LLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ------VVENAGEFFRDQ-GRQV---VLSRP 769 (807)
T ss_pred eeeehhHHHH--HhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH------HHHhhhhhcCCC-Ccce---eccCC
Confidence 4789999998 66899999999999999999865 567876542211 111111111111 1111 11112
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
..+...++++|+.||..+..+||++++|...|++.
T Consensus 770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 23445778899999999999999999998877653
No 261
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.47 E-value=4.2e-14 Score=92.15 Aligned_cols=87 Identities=18% Similarity=0.161 Sum_probs=59.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++||||+|++++++++|..||....... ....+... ....+...+..
T Consensus 156 ~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~----------~~~~i~~~-~~~~~~~~~~~ 222 (323)
T cd05575 156 FCGTPEYLAPEVL--RKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE----------MYDNILNK-PLRLKPNISVS 222 (323)
T ss_pred ccCChhhcChhhh--cCCCCCccccccccchhhhhhhcCCCCCCCCCHHH----------HHHHHHcC-CCCCCCCCCHH
Confidence 4689999999998 55678899999999999999999999986532211 11111111 11222333444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMS 110 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ 110 (133)
..+ ++..||+.||.+||++.
T Consensus 223 ~~~-------li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 223 ARH-------LLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHH-------HHHHHhhcCHHhCCCCC
Confidence 444 44448899999999874
No 262
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.47 E-value=3.2e-13 Score=86.81 Aligned_cols=95 Identities=18% Similarity=0.231 Sum_probs=60.4
Q ss_pred CCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-cccccCC
Q 040499 4 ARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-DLKRHGL 79 (133)
Q Consensus 4 ~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (133)
..|+..|++||.+.. ....++.++|+||+|+++|++++|..|+....... .......... ....+..
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 240 (292)
T cd06644 170 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR---------VLLKIAKSEPPTLSQPSK 240 (292)
T ss_pred ecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH---------HHHHHhcCCCccCCCCcc
Confidence 347788999998732 12346778999999999999999999876432210 0111111110 1111222
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+. .+..++..||+.+|++||++.+|++
T Consensus 241 ~~~-------~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 241 WSM-------EFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred cCH-------HHHHHHHHHhcCCcccCcCHHHHhc
Confidence 233 3445556699999999999999976
No 263
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.47 E-value=8.5e-14 Score=94.68 Aligned_cols=89 Identities=19% Similarity=0.254 Sum_probs=67.3
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
+=|..|.|||+. ....|+..+|+||+|+++++|++|..|+....... -+...+..+ .....++...
T Consensus 474 ~~t~~y~APEvl--~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~---------ei~~~i~~~---~~s~~vS~~A 539 (612)
T KOG0603|consen 474 ALTLQYVAPEVL--AIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI---------EIHTRIQMP---KFSECVSDEA 539 (612)
T ss_pred chhhcccChhhh--ccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH---------HHHHhhcCC---ccccccCHHH
Confidence 447789999998 56789999999999999999999999987654321 023222222 2235667777
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
++++.. ||+.||.+|+++.++..
T Consensus 540 KdLl~~-------LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 540 KDLLQQ-------LLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHHHH-------hccCChhhCcChhhhcc
Confidence 777777 66999999999999875
No 264
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.47 E-value=1.3e-13 Score=87.39 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=58.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|+|||.+ ....++.++|+||+|++++++++|+.|+...... . ...........+..+...+..
T Consensus 169 ~~~~~~y~aPE~~--~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~ 237 (265)
T cd06652 169 VTGTPYWMSPEVI--SGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-----A----AIFKIATQPTNPVLPPHVSDH 237 (265)
T ss_pred CCCCccccChhhh--cCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-----H----HHHHHhcCCCCCCCchhhCHH
Confidence 4578899999988 4456788999999999999999999998643111 0 011111111122222222333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+++ ..||. +|+.||++++|+.
T Consensus 238 ~~~~i-------~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 238 CRDFL-------KRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHHHH-------HHHhc-ChhhCCCHHHHhc
Confidence 33333 44664 8999999999875
No 265
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.47 E-value=2.3e-13 Score=86.64 Aligned_cols=95 Identities=24% Similarity=0.306 Sum_probs=62.5
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-cccccCCCCh
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGE-DLKRHGLVTE 82 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 82 (133)
.++..|++||.+ ....++.++|+||+|++++++++ +..|+...... . ......... ....+...+.
T Consensus 179 ~~~~~y~~PE~~--~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~------~----~~~~~~~~~~~~~~~~~~~~ 246 (275)
T cd05046 179 LIPLRWLAPEAV--QEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE------E----VLNRLQAGKLELPVPEGCPS 246 (275)
T ss_pred eeEEeecChhhh--ccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH------H----HHHHHHcCCcCCCCCCCCCH
Confidence 345679999987 44567789999999999999998 66677532211 0 111111111 1111222333
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
.+..++.+||+.+|.+||++.+++..|.+
T Consensus 247 -------~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 247 -------RLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred -------HHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 45556666999999999999999998864
No 266
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.47 E-value=1.8e-13 Score=88.83 Aligned_cols=96 Identities=21% Similarity=0.309 Sum_probs=62.2
Q ss_pred CCCccccccCcccccc-ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 3 DARGTVSYIAPEVFCR-NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~-~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
...|+..|++||.+.. ....++.++|+||+|++++++++|..|+....... ..................+
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 246 (313)
T cd06633 176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS---------ALYHIAQNDSPTLQSNEWT 246 (313)
T ss_pred CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH---------HHHHHHhcCCCCCCccccC
Confidence 3468889999998731 13457889999999999999999999886542211 0111111111111111222
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. .+..++..||+.+|.+||++.+++.
T Consensus 247 ~-------~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 247 D-------SFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred H-------HHHHHHHHHccCChhhCcCHHHHhc
Confidence 2 3445666699999999999999885
No 267
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.47 E-value=5.4e-13 Score=85.55 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=61.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|+|||++ ....++.++|+||+|++++++++|..||....... ............ ....+...+.
T Consensus 161 ~~g~~~~~aPE~~--~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~- 230 (285)
T cd05632 161 RVGTVGYMAPEVL--NNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV------KREEVDRRVLET-EEVYSAKFSE- 230 (285)
T ss_pred CCCCcCccChHHh--cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHhhhcc-ccccCccCCH-
Confidence 4588999999998 45678889999999999999999999986532211 001111111111 1111222333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC-----HHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS-----MSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~v~~ 114 (133)
.+..++..||+.||++||+ +.+++.
T Consensus 231 ------~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 231 ------EAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ------HHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 2345555699999999999 667664
No 268
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.46 E-value=1.5e-13 Score=86.08 Aligned_cols=92 Identities=21% Similarity=0.297 Sum_probs=61.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC--CC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL--VT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 81 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..|+....... .... .........+.. .+
T Consensus 157 ~~~~~~~~~PE~~--~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~ 224 (253)
T cd05122 157 MVGTPYWMAPEVI--NGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK---------ALFK-IATNGPPGLRNPEKWS 224 (253)
T ss_pred eecCCcccCHHHH--cCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH---------HHHH-HHhcCCCCcCcccccC
Confidence 4577889999988 44567889999999999999999999886432211 0111 111111111111 12
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. .+..++.+||+.||++||++.+++.
T Consensus 225 ~-------~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 225 D-------EFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred H-------HHHHHHHHHccCChhhCCCHHHHhc
Confidence 3 3555566699999999999999875
No 269
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=8.1e-14 Score=89.15 Aligned_cols=88 Identities=23% Similarity=0.357 Sum_probs=70.0
Q ss_pred CCCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 1 ~~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
++++|||+-|+|||++ ....|...+|+|.+|+++||+..|+.||....... +...+. ......|...
T Consensus 325 ~kTFCGTPEYLAPEVl--eDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k----------LFeLIl-~ed~kFPr~l 391 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVL--EDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK----------LFELIL-MEDLKFPRTL 391 (516)
T ss_pred eccccCChhhcCchhh--ccccccceeehhhhhHHHHHHHhccCcccccchhH----------HHHHHH-hhhccCCccC
Confidence 4689999999999999 56789999999999999999999999998765443 222111 2244567778
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCC
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSS 108 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps 108 (133)
+++...++..++ .+||.+|..
T Consensus 392 s~eAktLLsGLL-------~kdP~kRLG 412 (516)
T KOG0690|consen 392 SPEAKTLLSGLL-------KKDPKKRLG 412 (516)
T ss_pred CHHHHHHHHHHh-------hcChHhhcC
Confidence 888888888866 999999963
No 270
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.46 E-value=1.8e-14 Score=94.16 Aligned_cols=93 Identities=22% Similarity=0.308 Sum_probs=59.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcccccc-CCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRH-GLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 81 (133)
..+||..|+|||++.. ...++.++||||+|++++++++|..||....... ....+..+.. ..+ ...+
T Consensus 155 ~~~gt~~y~aPE~~~~-~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~----------~~~~i~~~~~-~~~~~~~~ 222 (330)
T cd05586 155 TFCGTTEYLAPEVLLD-EKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ----------MYRNIAFGKV-RFPKNVLS 222 (330)
T ss_pred CccCCccccCHHHHcC-CCCCCCccceeccccEEEEeccCCCCCCCCCHHH----------HHHHHHcCCC-CCCCccCC
Confidence 3568999999998732 2347889999999999999999999986532211 1111111111 112 2234
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCC----CHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRS----SMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rp----s~~~v~~ 114 (133)
....+ ++..||+.||.+|| ++.+++.
T Consensus 223 ~~~~~-------li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 223 DEGRQ-------FVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHH-------HHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 44444 44458899999998 5666654
No 271
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.46 E-value=3.2e-13 Score=86.15 Aligned_cols=104 Identities=15% Similarity=0.099 Sum_probs=63.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc-----------
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE----------- 72 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 72 (133)
..++..|++||.+.. ...++.++|+|++|++++++++|+.+|....... ........+....
T Consensus 158 ~~~~~~~~~PE~~~~-~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 158 YVVTRWYRAPELLLG-DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID------QLFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred ccCcccccCcHHHhc-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHHcCCCchHhcccchhhh
Confidence 346778999998732 2367889999999999999999998875432110 0000000000000
Q ss_pred ---cccccCC----CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 73 ---DLKRHGL----VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 73 ---~~~~~~~----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....+.. ...........+.+++..||+.||.+||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000000 01111223456778888899999999999999875
No 272
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.46 E-value=3.2e-13 Score=86.60 Aligned_cols=103 Identities=18% Similarity=0.178 Sum_probs=65.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..++..|++||.+ ....++.++|+|++|++++++++|+.|+........ .......+.. ....+..+.... .
T Consensus 163 ~~~~~~y~~pE~~--~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~-~ 234 (287)
T cd06621 163 FTGTSFYMAPERI--QGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPL-GPIELLSYIV----NMPNPELKDEPG-N 234 (287)
T ss_pred ccCCccccCHHHh--cCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCC-ChHHHHHHHh----cCCchhhccCCC-C
Confidence 3467889999988 456788899999999999999999999875532110 1111112211 111111111111 0
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.......+..++..||+.+|++||++.+|+.
T Consensus 235 ~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 235 GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0012234667778899999999999999987
No 273
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.46 E-value=8.3e-14 Score=87.26 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=71.7
Q ss_pred cccccCccccccccCc-cccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHH
Q 040499 7 TVSYIAPEVFCRNFGG-ISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEE 85 (133)
Q Consensus 7 t~~~~ape~~~~~~~~-~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (133)
.+.||+||.++..-.. .-..+|+|||++++||+.++.-||........ ......++....+|..++..
T Consensus 349 ~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec---------gmkialeglrv~ippgis~h-- 417 (448)
T KOG0195|consen 349 SPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC---------GMKIALEGLRVHIPPGISRH-- 417 (448)
T ss_pred CcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh---------hhhhhhccccccCCCCccHH--
Confidence 5789999998432222 23579999999999999999999976544221 23344556666667666653
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCc
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGL 120 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~ 120 (133)
+.+||.-|++.||.+||.+..|+-.|+++.
T Consensus 418 -----m~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 418 -----MNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -----HHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 444555599999999999999999998864
No 274
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.46 E-value=1.4e-13 Score=87.87 Aligned_cols=94 Identities=18% Similarity=0.244 Sum_probs=61.2
Q ss_pred CCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccc--cccC
Q 040499 4 ARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDL--KRHG 78 (133)
Q Consensus 4 ~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 78 (133)
..|+..|++||.+.. ....++.++|+||+|++++++++|..|+....... ..........+ ..+.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~ 232 (280)
T cd06611 163 FIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR----------VLLKILKSEPPTLDQPS 232 (280)
T ss_pred eecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH----------HHHHHhcCCCCCcCCcc
Confidence 357889999998731 12346778999999999999999999986532211 11111111111 1122
Q ss_pred CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 79 LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+.. +..++..||+.+|++||++.+|++
T Consensus 233 ~~~~~-------~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 233 KWSSS-------FNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred cCCHH-------HHHHHHHHhccChhhCcCHHHHhc
Confidence 23333 444555699999999999999976
No 275
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.46 E-value=1.9e-13 Score=88.02 Aligned_cols=93 Identities=18% Similarity=0.289 Sum_probs=61.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc-ccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED-LKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 82 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..||........ .......+.. ...+...+.
T Consensus 175 ~~~~~~y~~PE~~--~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 243 (293)
T cd06647 175 MVGTPYWMAPEVV--TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---------LYLIATNGTPELQNPEKLSA 243 (293)
T ss_pred ccCChhhcCchhh--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh---------eeehhcCCCCCCCCccccCH
Confidence 3577889999988 455678899999999999999999999865432110 0000001100 001111222
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+++.
T Consensus 244 -------~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 244 -------IFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred -------HHHHHHHHHccCChhhCcCHHHHhc
Confidence 3445666799999999999999986
No 276
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.46 E-value=7.6e-14 Score=90.16 Aligned_cols=45 Identities=20% Similarity=0.208 Sum_probs=37.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..||..|+|||++.+ ...++.++|+||+|++++++++|..||...
T Consensus 163 ~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 163 EVVTLWYRPPDVLLG-STEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred CcccCCCCChHHHcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 457889999998732 245788999999999999999999998754
No 277
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.46 E-value=3.2e-13 Score=85.87 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=61.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|+|||++ ....++.++|+||+|++++++++|..|+....... .....+... . ......+...+..
T Consensus 166 ~~~~~~y~aPE~~--~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~-~--~~~~~~~~~~~~~ 236 (267)
T PHA03390 166 YDGTLDYFSPEKI--KGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE----LDLESLLKR-Q--QKKLPFIKNVSKN 236 (267)
T ss_pred CCCCCcccChhhh--cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch----hhHHHHHHh-h--cccCCcccccCHH
Confidence 4578899999998 45678889999999999999999999987432211 111111111 1 1111122234444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC-HHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS-MSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps-~~~v~~ 114 (133)
.. .++..||+.+|.+|++ ++++++
T Consensus 237 ~~-------~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 237 AN-------DFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HH-------HHHHHHhccChhhCCchHHHHhc
Confidence 44 4444588999999996 688873
No 278
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.46 E-value=2.8e-13 Score=87.77 Aligned_cols=43 Identities=26% Similarity=0.413 Sum_probs=37.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
..|+..|++||.+ .+..++.++|+||+|++++++++|..|+..
T Consensus 158 ~~~~~~~~aPE~~--~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 158 FVGTRSYMSPERL--QGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred CCCCcCccChhHh--cCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 4678899999987 455688899999999999999999998754
No 279
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=1.4e-13 Score=92.65 Aligned_cols=102 Identities=17% Similarity=0.281 Sum_probs=75.5
Q ss_pred CCCCCccccccCccccccccCccc-cccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC
Q 040499 1 MLDARGTVSYIAPEVFCRNFGGIS-HKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL 79 (133)
Q Consensus 1 ~~~~~gt~~~~ape~~~~~~~~~~-~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (133)
+++.||+..|-|||++ .+..|+ ..+||||+|+++|.++.|+.||+..+... ....+- .+...+|..
T Consensus 175 L~TsCGSLAYSAPEIL--LGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE----------TLTmIm-DCKYtvPsh 241 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEIL--LGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE----------TLTMIM-DCKYTVPSH 241 (864)
T ss_pred hhcccchhhccCchhh--hcCccCCcchhhhHHHHHHHHHHhCCCccccccchh----------hhhhhh-cccccCchh
Confidence 3678999999999998 455665 67999999999999999999998765432 111111 223345666
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccC
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEA 122 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~ 122 (133)
.+.++.+++.. ++..||.+|.+.++|.. +|+..-..
T Consensus 242 vS~eCrdLI~s-------MLvRdPkkRAslEeI~s~~Wlq~~D~~ 279 (864)
T KOG4717|consen 242 VSKECRDLIQS-------MLVRDPKKRASLEEIVSTSWLQAGDRG 279 (864)
T ss_pred hhHHHHHHHHH-------HHhcCchhhccHHHHhccccccCCCCC
Confidence 67777777777 55999999999999975 66655444
No 280
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.45 E-value=1.9e-13 Score=86.39 Aligned_cols=95 Identities=19% Similarity=0.234 Sum_probs=63.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC-CCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL-VTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 82 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..|+...... .... .............+.. .+.
T Consensus 160 ~~~~~~y~~pE~~--~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~---~~~~----~~~~~~~~~~~~~~~~~~~~ 230 (264)
T cd06623 160 FVGTVTYMSPERI--QGESYSYAADIWSLGLTLLECALGKFPFLPPGQP---SFFE----LMQAICDGPPPSLPAEEFSP 230 (264)
T ss_pred eeecccccCHhhh--CCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc---CHHH----HHHHHhcCCCCCCCcccCCH
Confidence 3577889999988 4557788999999999999999999998655321 0111 1111112222222222 344
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++..||+.+|++||++.+++.
T Consensus 231 -------~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 231 -------EFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred -------HHHHHHHHHccCChhhCCCHHHHHh
Confidence 3444555599999999999999986
No 281
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.45 E-value=8.3e-14 Score=92.09 Aligned_cols=92 Identities=17% Similarity=0.269 Sum_probs=63.4
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+-+||++|||||++ ..+.|+...|+|++||++|||+.|..||.......-.++ +.+.+.+ .....++..++
T Consensus 345 ~rvGT~GYMAPEvl--~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE------vdrr~~~-~~~ey~~kFS~ 415 (591)
T KOG0986|consen 345 GRVGTVGYMAPEVL--QNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE------VDRRTLE-DPEEYSDKFSE 415 (591)
T ss_pred cccCcccccCHHHH--cCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH------HHHHHhc-chhhcccccCH
Confidence 45899999999999 566799999999999999999999999975443221011 1111111 12223455566
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMS 110 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~ 110 (133)
...++.+.++ ++||++|..+.
T Consensus 416 eakslc~~LL-------~Kdp~~RLGcr 436 (591)
T KOG0986|consen 416 EAKSLCEGLL-------TKDPEKRLGCR 436 (591)
T ss_pred HHHHHHHHHH-------ccCHHHhccCC
Confidence 6666655544 99999998765
No 282
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.45 E-value=1.2e-13 Score=90.54 Aligned_cols=119 Identities=15% Similarity=0.069 Sum_probs=67.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhH----------H-------HHh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPD----------W-------FYK 66 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~----------~-------~~~ 66 (133)
..|+..|++||.+.. ...++.++|+||+|++++++++|..||....... ...... + ...
T Consensus 168 ~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
T cd07858 168 YVVTRWYRAPELLLN-CSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH---QLKLITELLGSPSEEDLGFIRNEKARR 243 (337)
T ss_pred cccccCccChHHHhc-CCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH---HHHHHHHHhCCCChHHhhhcCchhhhH
Confidence 457888999998732 2357889999999999999999999886432100 000000 0 000
Q ss_pred hhcCCccccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccCCCCCC
Q 040499 67 LLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEALQVPP 127 (133)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~~~~~~ 127 (133)
......... ..............+..++..||+.+|++||++++++. .++........+.
T Consensus 244 ~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~ 305 (337)
T cd07858 244 YIRSLPYTP-RQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPV 305 (337)
T ss_pred HHHhcCccc-ccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCcc
Confidence 000000000 00000001112334567777799999999999999986 3665544443333
No 283
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.45 E-value=1.6e-13 Score=90.09 Aligned_cols=44 Identities=16% Similarity=0.170 Sum_probs=36.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.|+..|+|||.+. ....++.++|+||+|++++++++|..||...
T Consensus 179 ~~~~~y~aPE~~~-~~~~~~~~~DiwSlGvil~el~~g~~pf~~~ 222 (342)
T cd07854 179 LVTKWYRSPRLLL-SPNNYTKAIDMWAAGCIFAEMLTGKPLFAGA 222 (342)
T ss_pred cccccccCHHHHh-CccccCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 4678899999863 2345778999999999999999999998644
No 284
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.45 E-value=1.4e-13 Score=90.08 Aligned_cols=117 Identities=14% Similarity=0.056 Sum_probs=66.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCc----------chhhhH----HHHhhhc
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSST----------EMYFPD----WFYKLLE 69 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~----------~~~~~~----~~~~~~~ 69 (133)
+.||..|++||.+.. ...++.++|+||+|++++++++|..|+.......... ...... .....+.
T Consensus 172 ~~~~~~y~aPE~~~~-~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (337)
T cd07852 172 YVATRWYRAPEILLG-STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLD 250 (337)
T ss_pred ccccccccCceeeec-cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhh
Confidence 457889999998732 3456789999999999999999999885432110000 000000 0000000
Q ss_pred CCccccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccC
Q 040499 70 PGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEA 122 (133)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~ 122 (133)
...... ..............+..++..||+.||++||++.+++. .+++..+.
T Consensus 251 ~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~ 304 (337)
T cd07852 251 SLPSRP-RKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304 (337)
T ss_pred hccccc-ccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence 000000 00000001112234666777799999999999999986 45555444
No 285
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.45 E-value=2.2e-13 Score=87.15 Aligned_cols=44 Identities=23% Similarity=0.218 Sum_probs=37.1
Q ss_pred CCccccccCccccccccC-ccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFG-GISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~-~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..|+..|++||++ ... .++.++|+||+|++++++++|..++...
T Consensus 161 ~~~~~~~~~PE~~--~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 205 (288)
T cd07833 161 YVATRWYRAPELL--VGDTNYGKPVDVWAIGCIMAELLDGEPLFPGD 205 (288)
T ss_pred cccccCCcCCchh--cCCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 4577889999998 344 6788999999999999999999888643
No 286
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.45 E-value=2.2e-13 Score=87.42 Aligned_cols=45 Identities=22% Similarity=0.263 Sum_probs=37.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..||..|+|||.+.+ ...++.++|+||+|++++++++|..||...
T Consensus 163 ~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~~l~~l~~g~~pf~~~ 207 (288)
T cd07871 163 EVVTLWYRPPDVLLG-STEYSTPIDMWGVGCILYEMATGRPMFPGS 207 (288)
T ss_pred ceecccccChHHhcC-CcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 457889999998732 246788999999999999999999998654
No 287
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.45 E-value=1e-12 Score=85.82 Aligned_cols=111 Identities=14% Similarity=0.062 Sum_probs=66.6
Q ss_pred CCccccccCccccccccC-ccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc----------
Q 040499 4 ARGTVSYIAPEVFCRNFG-GISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE---------- 72 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~-~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 72 (133)
..|+..|++||.+. .. .++.++|+||+|++++++++|..||....... ....+........
T Consensus 166 ~~~~~~y~aPE~~~--~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~ 237 (330)
T cd07834 166 YVVTRWYRAPELLL--SSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID------QLNLIVEVLGTPSEEDLKFITSE 237 (330)
T ss_pred cccccCcCCceeee--cccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH------HHHHHHHhcCCCChhHhhhcccc
Confidence 45788899999983 34 67889999999999999999999986543210 0000000000000
Q ss_pred ---------cccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccC
Q 040499 73 ---------DLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEA 122 (133)
Q Consensus 73 ---------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~ 122 (133)
..................+..++.+||+.+|++||++.+++. .+++....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 000000000000112234566777799999999999999987 46555443
No 288
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.45 E-value=4.4e-13 Score=85.61 Aligned_cols=95 Identities=23% Similarity=0.282 Sum_probs=61.3
Q ss_pred CCccccccCcccccc--ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcccccc-CCC
Q 040499 4 ARGTVSYIAPEVFCR--NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRH-GLV 80 (133)
Q Consensus 4 ~~gt~~~~ape~~~~--~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 80 (133)
..|+..|++||.+.. ....++.++|+|++|++++++++|..|+....... ........ ...+..+ ...
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~ 233 (283)
T cd06617 163 DAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF--------QQLKQVVE-EPSPQLPAEKF 233 (283)
T ss_pred ccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH--------HHHHHHHh-cCCCCCCcccc
Confidence 457888999998732 11356789999999999999999999985422110 00111111 1111111 122
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+. .+..++..||..+|++||++.+|+.
T Consensus 234 ~~-------~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 234 SP-------EFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CH-------HHHHHHHHHccCChhhCcCHHHHhc
Confidence 33 3555666699999999999999986
No 289
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.45 E-value=6.5e-14 Score=90.49 Aligned_cols=110 Identities=16% Similarity=0.095 Sum_probs=62.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCc----------chhhhHHHHhhhcC--C
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSST----------EMYFPDWFYKLLEP--G 71 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~----------~~~~~~~~~~~~~~--~ 71 (133)
..|+..|+|||.+.+ ...++.++|+||+|++++++++|+.|+.......... ...+..+....... .
T Consensus 186 ~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (311)
T cd07866 186 LVVTRWYRPPELLLG-ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVH 264 (311)
T ss_pred ceeccCcCChHHhhC-CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccc
Confidence 356788999998732 3357889999999999999999998886433211000 00000000000000 0
Q ss_pred ccccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 72 EDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.....+.............+.+++..||+.||.+||++.+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 265 SFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred cCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000000111122245677788899999999999998874
No 290
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.44 E-value=1.1e-12 Score=85.82 Aligned_cols=120 Identities=15% Similarity=0.113 Sum_probs=67.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCC---------cchhhh-----HHHHhhh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSS---------TEMYFP-----DWFYKLL 68 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~---------~~~~~~-----~~~~~~~ 68 (133)
...|+..|++||.+.. ...++.++|+||+|++++++++|..||......... ...... .......
T Consensus 170 ~~~~~~~y~~PE~~~~-~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 248 (334)
T cd07855 170 EYVATRWYRAPELLLS-LPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYI 248 (334)
T ss_pred cccccccccChHHhcC-CcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHH
Confidence 3468889999998732 245788999999999999999999998654321000 000000 0000000
Q ss_pred cCCccccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccCCC
Q 040499 69 EPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEALQ 124 (133)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~~~ 124 (133)
. ......+.............+..++..||+.+|.+||++++++. .+++......
T Consensus 249 ~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 249 Q-NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred h-hcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcc
Confidence 0 00000000000001112334566667799999999999999886 5555554433
No 291
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.44 E-value=3.3e-13 Score=97.03 Aligned_cols=102 Identities=16% Similarity=0.232 Sum_probs=66.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||+.|+|||.+ .+..++.++||||+|++++++++|..||........ . .................+.
T Consensus 191 ~vGT~~YmAPE~l--~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki----~----~~~~i~~P~~~~p~~~iP~- 259 (932)
T PRK13184 191 IVGTPDYMAPERL--LGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI----S----YRDVILSPIEVAPYREIPP- 259 (932)
T ss_pred CCCCCCCCCHHHh--cCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh----h----hhhhccChhhccccccCCH-
Confidence 4699999999998 556788999999999999999999999865322110 0 0011111000000111222
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-CHHHHHHHHccCccC
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-SMSKAVEMLEGGLEA 122 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~v~~~l~~~~~~ 122 (133)
.+..++..||+.||++|+ +++++...|+...+.
T Consensus 260 ------~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 260 ------FLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred ------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 344566669999999996 566777777766554
No 292
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.44 E-value=4.5e-13 Score=88.93 Aligned_cols=46 Identities=24% Similarity=0.262 Sum_probs=37.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGV 50 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~ 50 (133)
..||..|+|||.+.+ ...++.++||||+|++++++++|+.||....
T Consensus 164 ~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 209 (372)
T cd07853 164 EVVTQYYRAPEILMG-SRHYTSAVDIWSVGCIFAELLGRRILFQAQS 209 (372)
T ss_pred CCcCCCcCCHHHHcC-CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence 457889999998732 2357889999999999999999999987543
No 293
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.44 E-value=9.8e-13 Score=83.62 Aligned_cols=97 Identities=15% Similarity=0.241 Sum_probs=57.9
Q ss_pred CCccccccCccccccc-----cCccccccchhhhhHHHHHHHcc-CCCCCCCCCCCCCcchhhhHHHHhhhcCCc----c
Q 040499 4 ARGTVSYIAPEVFCRN-----FGGISHKSDVYGFGMTVLELVGV-RNNTASGVTHTSSTEMYFPDWFYKLLEPGE----D 73 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~-----~~~~~~~~dv~s~g~~~~~l~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 73 (133)
..|+..|++||++... ...++.++|+||+|+++++++++ ..|+...... ........... .
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---------~~~~~~~~~~~~~~~~ 231 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR---------EVLNHVIKDQQVKLFK 231 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH---------HHHHHHHhhcccccCC
Confidence 3577889999987321 12456789999999999999874 5566432211 01111111111 1
Q ss_pred ccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 74 LKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
+......++ .+..++..|| .+|++||++++|++.|.
T Consensus 232 ~~~~~~~~~-------~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 232 PQLELPYSE-------RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CccCCCCcH-------HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111111222 3344555699 57999999999998774
No 294
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.44 E-value=3e-14 Score=92.63 Aligned_cols=88 Identities=23% Similarity=0.315 Sum_probs=59.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|++||.+ ....++.++|+||+|++++++++|+.||...... .. ....... ....+...+..
T Consensus 158 ~~g~~~y~aPE~~--~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~------~~---~~~i~~~--~~~~p~~~~~~ 224 (318)
T cd05582 158 FCGTVEYMAPEVV--NRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK------ET---MTMILKA--KLGMPQFLSPE 224 (318)
T ss_pred ccCChhhcCHHHH--cCCCCCCccceeccceEeeeeccCCCCCCCCCHH------HH---HHHHHcC--CCCCCCCCCHH
Confidence 4689999999998 4567788999999999999999999998653211 11 1111111 11223334444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSK 111 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~ 111 (133)
.. .++..||+.||.+||++.+
T Consensus 225 ~~-------~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 225 AQ-------SLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HH-------HHHHHHhhcCHhHcCCCCC
Confidence 33 4445599999999999433
No 295
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.44 E-value=2e-13 Score=90.59 Aligned_cols=96 Identities=16% Similarity=0.220 Sum_probs=62.2
Q ss_pred CCCccccccCccccccc--cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC--
Q 040499 3 DARGTVSYIAPEVFCRN--FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG-- 78 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~--~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (133)
..+||+.|+|||++... ...++.++|+||+|++++++++|..||....... ..............+.
T Consensus 202 ~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~---------~~~~i~~~~~~~~~~~~~ 272 (370)
T cd05596 202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG---------TYSKIMDHKNSLTFPDDI 272 (370)
T ss_pred CCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH---------HHHHHHcCCCcCCCCCcC
Confidence 35699999999987321 2247889999999999999999999987543211 0111111111122222
Q ss_pred CCChhHHHHHHHHHHhhhhhccCCCCC--CCCHHHHHH
Q 040499 79 LVTEEEEVIVRKMIIVRLWCIQTNPSD--RSSMSKAVE 114 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~cl~~~p~~--Rps~~~v~~ 114 (133)
..+....+++. .|++.+|.+ |+++.++++
T Consensus 273 ~~s~~~~~li~-------~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 273 EISKQAKDLIC-------AFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCHHHHHHHH-------HHccChhhccCCCCHHHHhc
Confidence 23444444444 477888887 999999975
No 296
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.44 E-value=1.8e-13 Score=90.70 Aligned_cols=94 Identities=19% Similarity=0.297 Sum_probs=68.8
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc-cc--ccC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED-LK--RHG 78 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~ 78 (133)
.+.+||+.|+|||++ ....|+..+|+||.|++++-|+.|..||.+..... ....+..+.. .. .-.
T Consensus 196 ~~~~Gtp~y~APEvl--~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~----------~~~~i~~~~~~f~~~~w~ 263 (382)
T KOG0032|consen 196 HTIVGTPEYVAPEVL--GGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE----------IFLAILRGDFDFTSEPWD 263 (382)
T ss_pred eeecCCccccCchhh--cCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH----------HHHHHHcCCCCCCCCCcc
Confidence 467899999999998 55789999999999999999999999998764322 1111111111 11 112
Q ss_pred CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 79 LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+....++++. ++..||..|+++.++++
T Consensus 264 ~is~~akd~i~~-------ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 264 DISESAKDFIRK-------LLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ccCHHHHHHHHH-------hcccCcccCCCHHHHhc
Confidence 345666666666 66999999999999998
No 297
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=1.8e-13 Score=90.00 Aligned_cols=88 Identities=17% Similarity=0.334 Sum_probs=64.7
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
.+++||+-|+|||++ ....|...+|+|++|++++|++.|++||++..... +.+.+.+- ....|...+
T Consensus 508 kTFCGTPdYiAPEIi--~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e----------lF~aI~eh-nvsyPKslS 574 (683)
T KOG0696|consen 508 KTFCGTPDYIAPEII--AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE----------LFQAIMEH-NVSYPKSLS 574 (683)
T ss_pred eeecCCCcccccceE--EecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH----------HHHHHHHc-cCcCccccc
Confidence 368999999999999 78899999999999999999999999998765432 22211111 112355566
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
.+..+..+.++ .+.|.+|..+
T Consensus 575 kEAv~ickg~l-------tK~P~kRLGc 595 (683)
T KOG0696|consen 575 KEAVAICKGLL-------TKHPGKRLGC 595 (683)
T ss_pred HHHHHHHHHHh-------hcCCccccCC
Confidence 66666666654 8889998754
No 298
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.44 E-value=4.9e-13 Score=86.46 Aligned_cols=96 Identities=20% Similarity=0.225 Sum_probs=60.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCC-ccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPG-EDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 82 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..||.+..... ......... ..+......+.
T Consensus 176 ~~~~~~y~aPE~~--~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 244 (305)
T cd05609 176 VCGTPEYIAPEVI--LRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---------LFGQVISDDIEWPEGDEALPA 244 (305)
T ss_pred CccCccccCchhc--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---------HHHHHHhcccCCCCccccCCH
Confidence 3567889999987 45678899999999999999999999986432110 111111111 11111112233
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
. +..++..||+.||++||++..+.+.|+
T Consensus 245 ~-------~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 245 D-------AQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred H-------HHHHHHHHhccChhhccCccCHHHHHh
Confidence 3 445555599999999999655544444
No 299
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.44 E-value=9.3e-14 Score=90.45 Aligned_cols=87 Identities=18% Similarity=0.143 Sum_probs=59.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+... ....+...+..
T Consensus 156 ~~gt~~y~aPE~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----------~~~~i~~~-~~~~~~~~~~~ 222 (321)
T cd05603 156 FCGTPEYLAPEVL--RKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ----------MYDNILHK-PLQLPGGKTVA 222 (321)
T ss_pred ccCCcccCCHHHh--cCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH----------HHHHHhcC-CCCCCCCCCHH
Confidence 5689999999998 45678889999999999999999999986542111 11111111 12223333443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMS 110 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ 110 (133)
+..++..||+.||.+|++..
T Consensus 223 -------~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 223 -------ACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -------HHHHHHHHccCCHhhcCCCC
Confidence 34445558899999999753
No 300
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.44 E-value=2.1e-13 Score=88.93 Aligned_cols=86 Identities=16% Similarity=0.296 Sum_probs=58.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|+|||++ ....++.++|+||+|++++++++|..||....... ....+... ....+...+..
T Consensus 161 ~~gt~~y~aPE~~--~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~----------~~~~i~~~-~~~~p~~~~~~ 227 (323)
T cd05615 161 FCGTPDYIAPEII--AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE----------LFQSIMEH-NVSYPKSLSKE 227 (323)
T ss_pred ccCCccccCHHHH--cCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH----------HHHHHHhC-CCCCCccCCHH
Confidence 4589999999998 45678899999999999999999999987542211 11111111 11223333443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
+..++..||+.+|.+|++.
T Consensus 228 -------~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 228 -------AVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -------HHHHHHHHcccCHhhCCCC
Confidence 3445555899999999974
No 301
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.44 E-value=4.3e-14 Score=92.20 Aligned_cols=87 Identities=15% Similarity=0.078 Sum_probs=58.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
.+||..|+|||++ ....++.++||||+|++++++++|..||....... ....+.... ...+...+..
T Consensus 156 ~~gt~~y~aPE~~--~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~----------~~~~~~~~~-~~~~~~~~~~ 222 (325)
T cd05604 156 FCGTPEYLAPEVI--RKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE----------MYDNILHKP-LVLRPGASLT 222 (325)
T ss_pred ccCChhhCCHHHH--cCCCCCCcCccccccceehhhhcCCCCCCCCCHHH----------HHHHHHcCC-ccCCCCCCHH
Confidence 5689999999998 55678899999999999999999999986532211 111111111 1112223443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMS 110 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ 110 (133)
.. .++..|++.+|.+||++.
T Consensus 223 ~~-------~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 223 AW-------SILEELLEKDRQRRLGAK 242 (325)
T ss_pred HH-------HHHHHHhccCHHhcCCCC
Confidence 33 444458899999999875
No 302
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.44 E-value=8.4e-13 Score=85.03 Aligned_cols=96 Identities=16% Similarity=0.204 Sum_probs=60.5
Q ss_pred CccccccCcccccccc--CccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 5 RGTVSYIAPEVFCRNF--GGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~--~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
.|+..|+|||.+.... ..++.++|+||+|++++++++|+.|+...... . .......... ....+...
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~---~~~~~~~~~~-~~~~~~~~-- 243 (296)
T cd06618 175 AGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-----F---EVLTKILQEE-PPSLPPNE-- 243 (296)
T ss_pred CCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-----H---HHHHHHhcCC-CCCCCCCC--
Confidence 3667899999883221 34778999999999999999999998642111 0 0011111111 11111110
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.....+..++..||+.||++||++.+++.
T Consensus 244 ---~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 244 ---GFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred ---CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11224556666799999999999999975
No 303
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.43 E-value=2.2e-13 Score=87.14 Aligned_cols=44 Identities=20% Similarity=0.175 Sum_probs=35.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
..++..|+|||++.+ ...++.++|+||+|++++++++|..|+..
T Consensus 159 ~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~~l~tg~~p~~~ 202 (284)
T cd07839 159 EVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPLFP 202 (284)
T ss_pred CccccCCcChHHHhC-CcccCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 356788999998732 23468899999999999999998888643
No 304
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.43 E-value=1.3e-13 Score=88.17 Aligned_cols=44 Identities=23% Similarity=0.224 Sum_probs=36.0
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.|+..|+|||++.+ ...++.++|+||+|++++++++|+.|+...
T Consensus 162 ~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 162 VVTLWYRAPEVLLG-SPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred cccccccChHHhcC-CCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 46788999998732 235678999999999999999999988653
No 305
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.43 E-value=2.8e-13 Score=86.00 Aligned_cols=99 Identities=15% Similarity=0.219 Sum_probs=57.4
Q ss_pred ccccccCcccccc-----ccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC
Q 040499 6 GTVSYIAPEVFCR-----NFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL 79 (133)
Q Consensus 6 gt~~~~ape~~~~-----~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (133)
++..|+|||++.. ....++.++|+||+|++++++++ +..||...... .. ................
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~------~~---~~~~~~~~~~~~~~~~ 234 (269)
T cd05042 164 VPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE------QV---LKQVVREQDIKLPKPQ 234 (269)
T ss_pred CcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH------HH---HHHHhhccCccCCCCc
Confidence 4567999998732 12356789999999999999998 66676543211 00 1111111111000011
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.... ....+..++..|| .||++||++++|+..|.
T Consensus 235 ~~~~---~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 235 LDLK---YSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred cccc---CCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111 1123334555588 49999999999998763
No 306
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.43 E-value=9.5e-13 Score=82.73 Aligned_cols=94 Identities=21% Similarity=0.314 Sum_probs=63.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..++..|++||.. .....+.++|+|++|++++++++|..|+...... ................+...+.
T Consensus 163 ~~~~~~y~~pE~~--~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~- 231 (260)
T cd06606 163 VRGTPYWMAPEVI--RGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP--------MAALYKIGSSGEPPEIPEHLSE- 231 (260)
T ss_pred CCCCccccCHhhh--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--------HHHHHhccccCCCcCCCcccCH-
Confidence 3577889999988 4456889999999999999999999998754311 0111111111122222333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++.+|++.||++||++.+++.
T Consensus 232 ------~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 232 ------EAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ------HHHHHHHHhCcCChhhCCCHHHHhh
Confidence 4555556699999999999999875
No 307
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.43 E-value=6.1e-13 Score=86.16 Aligned_cols=112 Identities=15% Similarity=0.153 Sum_probs=65.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCC------------
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPG------------ 71 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 71 (133)
..||..|+|||.+.+ ...++.++|+||+|++++++++|+.||........ ...........
T Consensus 164 ~~~~~~y~aPE~~~~-~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 164 EVVTLWYRPPDVLLG-SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE------LHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred ccccccccCCHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH------HHHHHHHhCCCCHHHHhhhcchh
Confidence 357889999998732 34578899999999999999999999865432110 00000000000
Q ss_pred --ccccccCCCC----hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccC
Q 040499 72 --EDLKRHGLVT----EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEA 122 (133)
Q Consensus 72 --~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~ 122 (133)
.....+.... .........+.+++..|++.||.+|+++.+++. .++.....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~ 295 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTR 295 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcccc
Confidence 0000000000 000011123445666699999999999999986 66665544
No 308
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.43 E-value=5.4e-13 Score=91.68 Aligned_cols=41 Identities=22% Similarity=0.390 Sum_probs=35.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNT 46 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~ 46 (133)
.+||..|++||++ .+..++.++||||+|++++|++++..++
T Consensus 328 ~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 328 WVGTVATNSPEIL--AGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred ccCCcCCCCchhh--cCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 5799999999998 5567899999999999999999876543
No 309
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=3.3e-13 Score=86.85 Aligned_cols=96 Identities=16% Similarity=0.315 Sum_probs=72.7
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
++++||+.|.|||++ .+..|...+|+|++|++++|+..|+.||+-..... .+....+++.+.+.+. ...+|...+
T Consensus 409 stfcgtpnyiapeil--rgeeygfsvdwwalgvlmfemmagrspfdivgm~n--~d~ntedylfqvilek-qiriprsls 483 (593)
T KOG0695|consen 409 STFCGTPNYIAPEIL--RGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN--PDMNTEDYLFQVILEK-QIRIPRSLS 483 (593)
T ss_pred ccccCCCcccchhhh--cccccCceehHHHHHHHHHHHHcCCCCcceecCCC--cccchhHHHHHHHhhh-cccccceee
Confidence 579999999999999 66799999999999999999999999998765443 2333444454444333 334567677
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSM 109 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~ 109 (133)
-.....++.++ ++||.+|..+
T Consensus 484 vkas~vlkgfl-------nkdp~erlgc 504 (593)
T KOG0695|consen 484 VKASHVLKGFL-------NKDPKERLGC 504 (593)
T ss_pred hhhHHHHHHhh-------cCCcHHhcCC
Confidence 77777777765 9999999754
No 310
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.42 E-value=1.9e-13 Score=87.30 Aligned_cols=44 Identities=25% Similarity=0.282 Sum_probs=35.6
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.++..|+|||++.+ ...++.++|+||+|++++++++|+.||...
T Consensus 160 ~~~~~~~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 160 VVTLWYRAPEILLG-SRQYSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred ccccCCCCCceeec-CcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 45778999998732 235688999999999999999999988643
No 311
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.42 E-value=6.9e-13 Score=83.82 Aligned_cols=93 Identities=15% Similarity=0.163 Sum_probs=60.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc---cccccCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE---DLKRHGLV 80 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 80 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..|+....... ......... ........
T Consensus 153 ~~~~~~y~~pe~~--~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 220 (260)
T cd05611 153 FVGTPDYLAPETI--LGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA----------VFDNILSRRINWPEEVKEFC 220 (260)
T ss_pred CCCCcCccChhhh--cCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH----------HHHHHHhcccCCCCcccccC
Confidence 4578899999987 44557889999999999999999999986432210 111111111 11111223
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
+. .+..++..||+.+|++||++.++.+.
T Consensus 221 ~~-------~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 221 SP-------EAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred CH-------HHHHHHHHHccCCHHHccCCCcHHHH
Confidence 33 34555566999999999977544443
No 312
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.42 E-value=4.8e-13 Score=88.47 Aligned_cols=92 Identities=21% Similarity=0.304 Sum_probs=60.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC--CCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG--LVT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 81 (133)
.+||+.|+|||++ ....++.++|+||+||+++++++|..||....... . .............+. ..+
T Consensus 199 ~~gt~~y~aPE~~--~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~------~---~~~i~~~~~~~~~~~~~~~s 267 (364)
T cd05599 199 TVGTPDYIAPEVF--LQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQE------T---YRKIINWKETLQFPDEVPLS 267 (364)
T ss_pred cccCccccCHHHH--cCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHH------H---HHHHHcCCCccCCCCCCCCC
Confidence 4699999999998 45678899999999999999999999987543211 0 111111111111122 234
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCC---HHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSS---MSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~~v~~ 114 (133)
....+++.+ |+. +|.+|++ +.+++.
T Consensus 268 ~~~~~li~~-------ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 268 PEAKDLIKR-------LCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HHHHHHHHH-------Hcc-CHhhcCCCCCHHHHhc
Confidence 444444443 555 8999997 888875
No 313
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.42 E-value=5.7e-13 Score=84.43 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=62.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..||...... ............+..+...++.
T Consensus 169 ~~~~~~y~aPE~~--~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---------~~~~~~~~~~~~~~~p~~~~~~ 237 (264)
T cd06653 169 VTGTPYWMSPEVI--SGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---------AAIFKIATQPTKPMLPDGVSDA 237 (264)
T ss_pred cCCcccccCHhhh--cCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---------HHHHHHHcCCCCCCCCcccCHH
Confidence 4578899999988 4456788999999999999999999998643211 1122222222223334445555
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+++.+ ||+ ++..||++.+++.
T Consensus 238 ~~~~i~~-------~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 238 CRDFLKQ-------IFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHH-------Hhc-CcccCccHHHHhc
Confidence 5555554 888 4799999998764
No 314
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.41 E-value=6.7e-13 Score=84.90 Aligned_cols=95 Identities=17% Similarity=0.175 Sum_probs=61.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..||..|++||.+. ....++.++|+||+|++++++++|..||....... .. . ... .........+...+..
T Consensus 155 ~~~~~~y~aPE~~~-~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~--~-~~~-~~~~~~~~~~~~~~~~ 225 (279)
T cd05633 155 SVGTHGYMAPEVLQ-KGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD----KH--E-IDR-MTLTVNVELPDSFSPE 225 (279)
T ss_pred cCCCcCccCHHHhc-CCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC----HH--H-HHH-HhhcCCcCCccccCHH
Confidence 35889999999872 13457889999999999999999999987543221 00 0 111 0111122223334443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
. ..++..||+.||++|+ +++++++
T Consensus 226 ~-------~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 226 L-------KSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred H-------HHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 3 3444558999999999 5988876
No 315
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.41 E-value=2e-13 Score=87.30 Aligned_cols=108 Identities=16% Similarity=0.131 Sum_probs=62.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHh-------hhcCC-----
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYK-------LLEPG----- 71 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~----- 71 (133)
..|+..|++||++.+ ...++.++|+||+|++++++++|..||....... ........... .....
T Consensus 160 ~~~~~~~~aPE~~~~-~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd07847 160 YVATRWYRAPELLVG-DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD--QLYLIRKTLGDLIPRHQQIFSTNQFFKG 236 (286)
T ss_pred cccccccCCHHHHhC-CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCChHHhhhccccccccc
Confidence 346788999998732 2457889999999999999999999987543211 00000000000 00000
Q ss_pred ccccccCCCC---hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 72 EDLKRHGLVT---EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 72 ~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.....+.... .........+.+++..||+.+|++||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 237 LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000000 001112235667777799999999999998874
No 316
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.41 E-value=7.5e-13 Score=87.29 Aligned_cols=44 Identities=23% Similarity=0.160 Sum_probs=37.9
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..|+..|+|||.+ ....++.++|+||+|++++++++|+.||...
T Consensus 177 ~~~~~~y~aPE~~--~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 177 YVVTRYYRAPEVI--LGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred CcccccccCHHHH--hCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 4578889999998 5567889999999999999999999888643
No 317
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.41 E-value=5.5e-13 Score=88.78 Aligned_cols=44 Identities=27% Similarity=0.374 Sum_probs=39.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.+||+.|+|||++ ....++.++||||+||+++++++|..||...
T Consensus 208 ~~gt~~Y~aPE~~--~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 208 LVGTPNYIAPEVL--LRTGYTQLCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred cccCcccCCHHHh--cCCCCCCeeeEEechHHHHHHHhCCCCCCCC
Confidence 5799999999998 5567889999999999999999999999754
No 318
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.41 E-value=9.5e-13 Score=84.11 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=62.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc-----------
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED----------- 73 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 73 (133)
.++..|++||.+.+ ...++.++|+|++|++++++++|+.|+....... ..............
T Consensus 162 ~~~~~y~~PE~~~~-~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 162 VITLWYRPPELLLG-ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE------QLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccCCceeeEc-cccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHHHhCCCchhhccccccchh
Confidence 45778999997632 2357889999999999999999999986543211 00001000000000
Q ss_pred -------ccccCCCChhHHH-HHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 74 -------LKRHGLVTEEEEV-IVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 74 -------~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...+......... ....+..++..||+.+|.+||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000011111 1345777888899999999999999875
No 319
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.41 E-value=3.2e-13 Score=85.16 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=64.1
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
...||..|+|||++. ....++.++|+||+|+++++++++..|+...... .......................
T Consensus 157 ~~~~~~~y~aPE~~~-~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~- 228 (260)
T PF00069_consen 157 PFVGTPEYMAPEVLQ-QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD------DQLEIIEKILKRPLPSSSQQSRE- 228 (260)
T ss_dssp SSSSSGGGSCHHHHT-TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH------HHHHHHHHHHHTHHHHHTTSHTT-
T ss_pred ccccccccccccccc-ccccccccccccccccccccccccccccccccch------hhhhhhhhcccccccccccccch-
Confidence 356888999999982 1568889999999999999999999988754110 11111111111000000000000
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....+.+++..||+.||++||++.++++
T Consensus 229 ----~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 229 ----KSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp ----SHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ----hHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0146667777799999999999999875
No 320
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.41 E-value=2.6e-13 Score=89.11 Aligned_cols=112 Identities=14% Similarity=0.090 Sum_probs=65.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhh-----------hcCCc
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKL-----------LEPGE 72 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~ 72 (133)
..|+..|+|||++.. ...++.++|+||+|++++++++|+.||....... ........ +....
T Consensus 174 ~~~~~~y~aPE~~~~-~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 174 YVVTRWYRAPEVILN-WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD------QLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred ceeeecccChhhhcC-ccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHHhcCCCCHHHHHHhcccc
Confidence 457788999998732 2457889999999999999999999987532110 00000000 00000
Q ss_pred ---cc-cccCCCChh----HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccC
Q 040499 73 ---DL-KRHGLVTEE----EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEA 122 (133)
Q Consensus 73 ---~~-~~~~~~~~~----~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~ 122 (133)
.. ..+...... .......+..++.+||+.||++||++.+++. .+++....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence 00 000000000 0011224567777799999999999999984 46655443
No 321
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.41 E-value=5.6e-13 Score=85.83 Aligned_cols=94 Identities=17% Similarity=0.187 Sum_probs=61.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+||+|++++++++|..|+...... ........... .........+.
T Consensus 176 ~~~~~~y~~pE~~--~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~------~~~~~~~~~~~--~~~~~~~~~~~- 244 (292)
T cd06657 176 LVGTPYWMAPELI--SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL------KAMKMIRDNLP--PKLKNLHKVSP- 244 (292)
T ss_pred cccCccccCHHHh--cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhhCC--cccCCcccCCH-
Confidence 3578889999987 4566788999999999999999999998643211 00111111110 00001111223
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+..++.+||+.+|.+||++.+|+.
T Consensus 245 ------~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 245 ------SLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ------HHHHHHHHHHhCCcccCcCHHHHhc
Confidence 3445566699999999999999986
No 322
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.41 E-value=5.6e-13 Score=83.74 Aligned_cols=92 Identities=22% Similarity=0.355 Sum_probs=61.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.. ....++.++|+|++|++++++++|..|+...... .. .... ........+...+..
T Consensus 159 ~~~~~~y~~pe~~--~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~--------~~-~~~~-~~~~~~~~~~~~~~~ 226 (254)
T cd06627 159 VVGTPYWMAPEVI--EMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM--------AA-LFRI-VQDDHPPLPEGISPE 226 (254)
T ss_pred cccchhhcCHhhh--cCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH--------HH-HHHH-hccCCCCCCCCCCHH
Confidence 4578889999987 3445788999999999999999999888643211 00 1111 111222223333443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+..++.+||+.+|++||++.+++.
T Consensus 227 -------~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 227 -------LKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -------HHHHHHHHHhCChhhCcCHHHHhc
Confidence 344555599999999999999874
No 323
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.41 E-value=6.6e-13 Score=86.89 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=61.6
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccc----------
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDL---------- 74 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 74 (133)
.++..|++||.+.+ ...++.++|+||+|++++++++|..|+...... .....+..........
T Consensus 194 ~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~~~ 266 (335)
T PTZ00024 194 VVTLWYRAPELLMG-AEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI------DQLGRIFELLGTPNEDNWPQAKKLPL 266 (335)
T ss_pred ccccCCCCChhccc-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHHHhCCCchhhCcchhhccc
Confidence 45778999998732 234688999999999999999999888654321 1111111111000000
Q ss_pred ------cccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 75 ------KRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 75 ------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+.............+.+++..||+.+|++||++.+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 267 YTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred ccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 0000000001111234566777799999999999999986
No 324
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.40 E-value=2.6e-13 Score=90.17 Aligned_cols=45 Identities=27% Similarity=0.378 Sum_probs=39.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
+.+||..|+|||++ ....++.++||||+||+++++++|..||...
T Consensus 203 ~~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 203 SLVGTPNYIAPEVL--LRTGYTQLCDWWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred ccCCCccccCHHHH--cCCCCCcceeeeeccceeeehhhCCCCCCCC
Confidence 35799999999998 5567889999999999999999999999754
No 325
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.40 E-value=1.7e-12 Score=82.12 Aligned_cols=95 Identities=18% Similarity=0.274 Sum_probs=62.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..|+....... ................+...+.
T Consensus 152 ~~~~~~~~~PE~~--~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~- 221 (262)
T cd05572 152 FCGTPEYVAPEII--LNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP-------MEIYNDILKGNGKLEFPNYIDK- 221 (262)
T ss_pred ccCCcCccChhHh--cCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH-------HHHHHHHhccCCCCCCCcccCH-
Confidence 4578899999987 45567889999999999999999999987553210 0111111111112222322233
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCC-----HHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSS-----MSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~v~~ 114 (133)
.+..++..||+.+|++|++ +.++++
T Consensus 222 ------~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 222 ------AAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ------HHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 4556666699999999999 777765
No 326
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.40 E-value=1.1e-12 Score=86.18 Aligned_cols=110 Identities=15% Similarity=0.102 Sum_probs=64.6
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccc--------
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDL-------- 74 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 74 (133)
...++..|++||.+.. ...++.++||||+|++++++++|+.||....... ....+..........
T Consensus 174 ~~~~~~~y~aPE~~~~-~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07851 174 GYVATRWYRAPEIMLN-WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID------QLKRIMNLVGTPDEELLQKISSE 246 (343)
T ss_pred CCcccccccCHHHHhC-CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHHhcCCCCHHHHhhccch
Confidence 3467888999998732 2357789999999999999999999886432210 000000000000000
Q ss_pred -------cccCC----CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccC
Q 040499 75 -------KRHGL----VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGG 119 (133)
Q Consensus 75 -------~~~~~----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~ 119 (133)
..+.. ...........+..++..||+.||++||++.+|+. .+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~ 304 (343)
T cd07851 247 SARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY 304 (343)
T ss_pred hHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence 00000 00000111335667777799999999999999976 44443
No 327
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.39 E-value=6.6e-13 Score=84.89 Aligned_cols=104 Identities=15% Similarity=0.071 Sum_probs=61.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc----------
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED---------- 73 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 73 (133)
..|+..|++||.+.. ...++.++|||++|++++++++|..++...... .........+.....
T Consensus 160 ~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 160 QVATRWYRAPELLYG-ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI------EQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred ccCcccccCceeeec-cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH------HHHHHHHHHcCCCChHHHhhccCcc
Confidence 457889999998732 235688999999999999999997766543211 000001110000000
Q ss_pred ----ccccCCCC----hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 74 ----LKRHGLVT----EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 74 ----~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...+.... .........+..++..||+.+|.+||++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000000 000112245667777799999999999999875
No 328
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.39 E-value=1.7e-12 Score=83.84 Aligned_cols=44 Identities=18% Similarity=0.171 Sum_probs=35.3
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.++..|+|||.+.. ...++.++|+||+|++++++++|..++...
T Consensus 184 ~~~~~y~aPE~~~~-~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 184 VVTLWYRPPELLLG-ERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred ccCccccCcHHhcC-CcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 46778999998732 234678999999999999999998887654
No 329
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.39 E-value=1.1e-12 Score=83.76 Aligned_cols=110 Identities=18% Similarity=0.160 Sum_probs=62.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCC-------CcchhhhHHHHh-hhcCCcccc
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTS-------STEMYFPDWFYK-LLEPGEDLK 75 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~ 75 (133)
..|+..|++||++.. ...++.++|+||||++++++++|+.++........ ........|... .........
T Consensus 158 ~~~~~~~~aPE~~~~-~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd07830 158 YVSTRWYRAPEILLR-STSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR 236 (283)
T ss_pred CCCcccccCceeeec-CcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence 457888999998732 34578899999999999999999888754322100 000000000000 000000000
Q ss_pred ccCCCChhHH----HHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 76 RHGLVTEEEE----VIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 76 ~~~~~~~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+........ .....+..++..||+.+|++||++++++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0111100000 11235667778899999999999999875
No 330
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.39 E-value=1.7e-12 Score=83.02 Aligned_cols=95 Identities=16% Similarity=0.195 Sum_probs=62.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+.. ...++.++|+||+|++++++++|..||........ .. .... ........+...+..
T Consensus 155 ~~~~~~y~aPE~~~~-~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~------~~-~~~~-~~~~~~~~~~~~s~~ 225 (278)
T cd05606 155 SVGTHGYMAPEVLQK-GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------HE-IDRM-TLTMAVELPDSFSPE 225 (278)
T ss_pred cCCCcCCcCcHHhcC-CCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch------HH-HHHH-hhccCCCCCCcCCHH
Confidence 458899999999731 23578899999999999999999999875422110 00 1111 111122233334444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
..+++ ..|+..+|.+|+ ++.++++
T Consensus 226 ~~~li-------~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 226 LRSLL-------EGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHH-------HHHhhcCHHhccCCCCCCHHHHHh
Confidence 44444 448899999999 8999885
No 331
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.39 E-value=5.5e-13 Score=85.32 Aligned_cols=44 Identities=20% Similarity=0.193 Sum_probs=35.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
..|+..|++||++.. ...++.++||||+|++++++++|..++..
T Consensus 160 ~~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 160 YVATRWYRAPELLVG-DTKYGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred ccceeeccCcHHhcc-ccccCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 457888999998732 23567889999999999999999888754
No 332
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.38 E-value=1.3e-13 Score=90.04 Aligned_cols=94 Identities=19% Similarity=0.193 Sum_probs=59.9
Q ss_pred CCccccccCccccccc----cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC-
Q 040499 4 ARGTVSYIAPEVFCRN----FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG- 78 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~----~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 78 (133)
..||..|+|||++... ...++.++||||+|++++++++|..||....... ..............+.
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---------~~~~i~~~~~~~~~~~~ 233 (330)
T cd05601 163 PVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK---------TYNNIMNFQRFLKFPED 233 (330)
T ss_pred ccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH---------HHHHHHcCCCccCCCCC
Confidence 3689999999987321 3457789999999999999999999986542211 0111111111111121
Q ss_pred -CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 79 -LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+....+ ++..|++ +|++|+++.+++.
T Consensus 234 ~~~~~~~~~-------li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 234 PKVSSDFLD-------LIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCHHHHH-------HHHHHcc-ChhhCCCHHHHhC
Confidence 23443333 3444777 9999999999885
No 333
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.38 E-value=3.7e-13 Score=89.47 Aligned_cols=44 Identities=30% Similarity=0.410 Sum_probs=39.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.+||..|+|||++ ....++.++|+||+||+++++++|..||...
T Consensus 208 ~~gt~~y~aPE~~--~~~~~~~~~DiwSlGvil~elltG~~Pf~~~ 251 (377)
T cd05629 208 TVGTPDYIAPEIF--LQQGYGQECDWWSLGAIMFECLIGWPPFCSE 251 (377)
T ss_pred cCCCccccCHHHH--ccCCCCCceeeEecchhhhhhhcCCCCCCCC
Confidence 4699999999998 5567889999999999999999999998653
No 334
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.38 E-value=1.7e-12 Score=80.75 Aligned_cols=93 Identities=18% Similarity=0.219 Sum_probs=62.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC--CC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL--VT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 81 (133)
..|+..|++||.. ....++.++|+|++|+++++++++..|+...... . ................. .+
T Consensus 146 ~~~~~~~~~pE~~--~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~ 214 (244)
T smart00220 146 FVGTPEYMAPEVL--LGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-----L----ELFKKIGKPKPPFPPPEWKIS 214 (244)
T ss_pred ccCCcCCCCHHHH--ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-----H----HHHHHHhccCCCCccccccCC
Confidence 4577889999987 4567788999999999999999999888652111 0 12222222211111111 22
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+..++..||..+|++||++.++++
T Consensus 215 -------~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 215 -------PEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred -------HHHHHHHHHHccCCchhccCHHHHhh
Confidence 24556666799999999999999986
No 335
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.38 E-value=9.2e-13 Score=89.70 Aligned_cols=92 Identities=26% Similarity=0.411 Sum_probs=68.0
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc-cCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR-HGLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 81 (133)
+.+||+-+||||++ ...|+..+||||||..++||+++.-||...... .-++..+..+..|.. .....
T Consensus 203 svIGTPEFMAPEmY---EE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~---------AQIYKKV~SGiKP~sl~kV~d 270 (632)
T KOG0584|consen 203 SVIGTPEFMAPEMY---EENYNELVDVYAFGMCMLEMVTSEYPYSECTNP---------AQIYKKVTSGIKPAALSKVKD 270 (632)
T ss_pred eeccCccccChHHH---hhhcchhhhhhhhhHHHHHHHhccCChhhhCCH---------HHHHHHHHcCCCHHHhhccCC
Confidence 35799999999998 479999999999999999999999999765332 114444444444332 23334
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+..++++.+ |+.. .++|+|+.++++
T Consensus 271 Pevr~fIek-------Cl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 271 PEVREFIEK-------CLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHHHHHH-------HhcC-chhccCHHHHhh
Confidence 444455554 9898 999999999986
No 336
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.37 E-value=1.4e-12 Score=85.40 Aligned_cols=97 Identities=19% Similarity=0.311 Sum_probs=61.1
Q ss_pred CCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc---cccc
Q 040499 4 ARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED---LKRH 77 (133)
Q Consensus 4 ~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 77 (133)
.+||..|+|||++.. ....++.++|+||+|++++++++|+.||....... ........... +...
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~---------~~~~i~~~~~~~~~p~~~ 233 (332)
T cd05623 163 AVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE---------TYGKIMNHKERFQFPAQV 233 (332)
T ss_pred cccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH---------HHHHHhCCCccccCCCcc
Confidence 468999999998732 12457889999999999999999999986532111 11111111111 1112
Q ss_pred CCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 78 GLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...+....+++.+++ |...++..|+++.++++
T Consensus 234 ~~~s~~~~~li~~ll-----~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 234 TDVSEDAKDLIRRLI-----CSREHRLGQNGIEDFKQ 265 (332)
T ss_pred ccCCHHHHHHHHHHc-----cChhhhcCCCCHHHHhC
Confidence 234555666666544 44555556789998875
No 337
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.37 E-value=3.3e-12 Score=82.82 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=37.2
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGV 50 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~ 50 (133)
..||..|+|||++. ....++.++|+||+|+++++++++..|+....
T Consensus 175 ~~~~~~y~aPE~~~-~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 175 VVVTIWYRAPELLL-GARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ccccccccCHHHHh-CCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 35678899999873 22457889999999999999999999987543
No 338
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.37 E-value=1.1e-12 Score=84.60 Aligned_cols=45 Identities=20% Similarity=0.256 Sum_probs=36.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..++..|++||.+.+ ...++.++||||+|++++++++|+.||...
T Consensus 164 ~~~~~~y~~PE~~~~-~~~~~~~~Dv~slG~~l~el~tg~~~f~~~ 208 (301)
T cd07873 164 EVVTLWYRPPDILLG-STDYSTQIDMWGVGCIFYEMSTGRPLFPGS 208 (301)
T ss_pred cceeecccCcHHHhC-CCCCccHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 346788999998732 235778999999999999999999998654
No 339
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.37 E-value=2.4e-12 Score=82.58 Aligned_cols=101 Identities=19% Similarity=0.225 Sum_probs=62.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+.......+.++|+|++|++++++++|..|+....... . .......... . ....+...+..
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~---~~~~~~~~~~-~-~~~~~~~~~~~ 238 (288)
T cd05583 166 FCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--S---QSEISRRILK-S-KPPFPKTMSAE 238 (288)
T ss_pred ccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--h---HHHHHHHHHc-c-CCCCCcccCHH
Confidence 35788999999873222236789999999999999999999985432211 0 0111111111 1 11223333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHcc
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEG 118 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~ 118 (133)
+..++..||+.||++||++.++...|+.
T Consensus 239 -------l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 239 -------ARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -------HHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 3445555999999999998877665554
No 340
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.36 E-value=1.4e-12 Score=82.29 Aligned_cols=93 Identities=20% Similarity=0.195 Sum_probs=62.1
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ ....++.++|+|++|++++++++|..|+....... .......... .....+...+.
T Consensus 159 ~~~~~~y~~PE~~--~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~- 227 (258)
T cd05578 159 TSGTPGYMAPEVL--CRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI-------RDQIRAKQET-ADVLYPATWST- 227 (258)
T ss_pred cCCChhhcCHHHH--cccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH-------HHHHHHHhcc-ccccCcccCcH-
Confidence 4577889999988 44567889999999999999999999987543211 1112211111 12222333333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCH--HHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSM--SKAV 113 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~--~~v~ 113 (133)
.+..++..||+.||.+||++ ++++
T Consensus 228 ------~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 228 ------EAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ------HHHHHHHHHccCChhHcCCccHHHHh
Confidence 45555566999999999999 6654
No 341
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.36 E-value=4.4e-12 Score=81.67 Aligned_cols=103 Identities=16% Similarity=0.109 Sum_probs=61.0
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCC------------c
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPG------------E 72 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 72 (133)
.++..|+|||.+. ....++.++|+||+|++++++++|.+++....... ........+... .
T Consensus 163 ~~~~~y~aPE~~~-~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (298)
T cd07841 163 VVTRWYRAPELLF-GARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID------QLGKIFEALGTPTEENWPGVTSLPD 235 (298)
T ss_pred ccceeeeCHHHHh-CCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH------HHHHHHHHcCCCchhhhhhcccccc
Confidence 4567899999873 22456889999999999999999977665432110 000000000000 0
Q ss_pred --cccc-cC-CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 73 --DLKR-HG-LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 73 --~~~~-~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.... +. ............+.+++..||+.||++||++.+|+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0000 00 000111122345677888899999999999999997
No 342
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.36 E-value=4.7e-12 Score=80.99 Aligned_cols=44 Identities=25% Similarity=0.276 Sum_probs=35.3
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.++..|++||.+.+ ...++.++|+||+|++++++++|+.||...
T Consensus 161 ~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 161 VVTLWYRAPEILLG-CKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred cccccccCCeEEec-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 46778999998732 234578899999999999999999988643
No 343
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.36 E-value=3.9e-12 Score=81.18 Aligned_cols=95 Identities=19% Similarity=0.228 Sum_probs=61.0
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||++ ....++.++|+|++|++++++++|+.||........ . .. +..... ......+...++.
T Consensus 154 ~~~~~~y~~PE~~--~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~---~~-~~~~~~-~~~~~~~~~~~~~ 224 (277)
T cd05577 154 RAGTPGYMAPEVL--QGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE--K---EE-LKRRTL-EMAVEYPDKFSPE 224 (277)
T ss_pred ccCCCCcCCHHHh--cCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc--H---HH-HHhccc-cccccCCccCCHH
Confidence 3467789999997 445688899999999999999999999865433110 0 00 111111 1122223334444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
.. .++..||+.||++|| ++.+++.
T Consensus 225 ~~-------~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 225 AK-------DLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HH-------HHHHHHccCChhHccCCCcccHHHHHh
Confidence 44 444559999999999 6666764
No 344
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.35 E-value=1.5e-12 Score=82.35 Aligned_cols=97 Identities=20% Similarity=0.290 Sum_probs=68.7
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC---
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG--- 78 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 78 (133)
.+.+-|++|.|||++ ...+|+..+|+||+||++|-++.|.+||.......+..+ ....+..+.. .+|.
T Consensus 221 ~TPc~TPyYvaPevl--g~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispg------Mk~rI~~gqy-~FP~pEW 291 (400)
T KOG0604|consen 221 MTPCFTPYYVAPEVL--GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG------MKRRIRTGQY-EFPEPEW 291 (400)
T ss_pred cCCcccccccCHHHh--CchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChh------HHhHhhccCc-cCCChhH
Confidence 456789999999998 456899999999999999999999999987655432122 3333333322 1121
Q ss_pred -CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 79 -LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+++...+.++. .|..+|.+|.++.++++
T Consensus 292 s~VSe~aKdlIR~-------LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 292 SCVSEAAKDLIRK-------LLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHHHHHHHHHHHH-------HhcCCchhheeHHHhhc
Confidence 234445555555 44999999999999986
No 345
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.35 E-value=2.1e-12 Score=82.98 Aligned_cols=91 Identities=15% Similarity=0.245 Sum_probs=60.8
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+ .....+.++|+||+|++++++++|..|+....... .......+ ....+...+..
T Consensus 158 ~~~~~~y~aPE~~--~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----------~~~~~~~~-~~~~~~~~~~~ 224 (290)
T cd05580 158 LCGTPEYLAPEII--LSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ----------IYEKILEG-KVRFPSFFSPD 224 (290)
T ss_pred CCCCccccChhhh--cCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH----------HHHHHhcC-CccCCccCCHH
Confidence 4588899999987 44567889999999999999999999986433110 11111111 12233334444
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
.. .++..||+.||.+|+ ++.++++
T Consensus 225 l~-------~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 225 AK-------DLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HH-------HHHHHHccCCHHHccCcccCCHHHHHc
Confidence 33 444559999999999 7777763
No 346
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=8.4e-13 Score=88.68 Aligned_cols=87 Identities=21% Similarity=0.346 Sum_probs=67.3
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHh-hhcCCccccccCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYK-LLEPGEDLKRHGLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 81 (133)
++|||+-|.|||++ .....+..+|.|++|+.++|+++|.+||.+..+.. ... .++.......|..++
T Consensus 578 TFcGTpEYVAPEII--LnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk----------tYn~ILkGid~i~~Pr~I~ 645 (732)
T KOG0614|consen 578 TFCGTPEYVAPEII--LNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK----------TYNLILKGIDKIEFPRRIT 645 (732)
T ss_pred eecCCcccccchhh--hccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH----------HHHHHHhhhhhhhcccccc
Confidence 58999999999999 55677899999999999999999999998765432 222 223333445577778
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCC
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSS 108 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps 108 (133)
....+++++++ ..+|.+|..
T Consensus 646 k~a~~Lik~LC-------r~~P~ERLG 665 (732)
T KOG0614|consen 646 KTATDLIKKLC-------RDNPTERLG 665 (732)
T ss_pred hhHHHHHHHHH-------hcCcHhhhc
Confidence 88888888865 778999976
No 347
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.35 E-value=9.1e-12 Score=81.99 Aligned_cols=44 Identities=25% Similarity=0.322 Sum_probs=36.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
..|+..|+|||.+. ....++.++|+||+|++++++++|+.|+..
T Consensus 177 ~~~~~~y~aPE~~~-~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 177 YVATRWYRAPEIML-NWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred cccCCCccCHHHHh-CccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 45788999999873 224578899999999999999999998854
No 348
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.34 E-value=3.7e-12 Score=81.25 Aligned_cols=103 Identities=17% Similarity=0.089 Sum_probs=61.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhh-----------c----
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLL-----------E---- 69 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----------~---- 69 (133)
.++..|+|||.+.. ...++.++|+|++|+++++++++..|+....... ....+.... .
T Consensus 159 ~~~~~~~aPE~~~~-~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 159 VVTLWYRAPEILLG-SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID------QLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred ccCcCcCChHHhcC-CcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH------HHHHHHHHhCCCcHHHHHhhccccc
Confidence 34677999998732 2367889999999999999999988886532110 000000000 0
Q ss_pred -CCccccc-cCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 70 -PGEDLKR-HGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 70 -~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....+.. ..............+..++..||+.||++||++.+|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000 00000111112345777778899999999999999875
No 349
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.34 E-value=2.5e-12 Score=82.68 Aligned_cols=44 Identities=23% Similarity=0.218 Sum_probs=35.7
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.++..|++||.+.. ...++.++|+||+|++++++++|..|+...
T Consensus 167 ~~~~~~~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 167 VVTLWYRAPELLLG-AKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred cccccccCchhhcC-CccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 46778999998732 234678999999999999999999888643
No 350
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.34 E-value=1.9e-12 Score=81.76 Aligned_cols=95 Identities=20% Similarity=0.209 Sum_probs=60.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
.++..|++||.. .....+.++|+|++|++++++++|..||...... . .......... ..+...
T Consensus 162 ~~~~~~~~Pe~~--~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---------~-~~~~~~~~~~-~~~~~~---- 224 (265)
T cd05579 162 VGTPDYIAPEVI--LGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE---------E-IFQNILNGKI-EWPEDV---- 224 (265)
T ss_pred ccCccccCHHHh--cCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---------H-HHHHHhcCCc-CCCccc----
Confidence 467789999987 4455788999999999999999999998643211 1 1111111111 111111
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.....+..++..||+.+|++||++..+.+.|+
T Consensus 225 -~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 225 -EVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -cCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 01224455566699999999999955554443
No 351
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.34 E-value=3.3e-12 Score=83.62 Aligned_cols=97 Identities=21% Similarity=0.320 Sum_probs=61.4
Q ss_pred CCccccccCccccccc---cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc---c
Q 040499 4 ARGTVSYIAPEVFCRN---FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR---H 77 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~---~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 77 (133)
.+||..|+|||++... ...++.++||||+|++++++++|..||....... .............. .
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~---------~~~~i~~~~~~~~~~~~~ 233 (331)
T cd05597 163 AVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE---------TYGKIMNHKEHFQFPPDV 233 (331)
T ss_pred eeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH---------HHHHHHcCCCcccCCCcc
Confidence 3589999999998321 2356789999999999999999999986532110 01111111111111 1
Q ss_pred CCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 78 GLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...+....+++.+++ |...++..|+++.+++.
T Consensus 234 ~~~~~~~~~li~~ll-----~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 234 TDVSEEAKDLIRRLI-----CSPETRLGRNGLQDFKD 265 (331)
T ss_pred CCCCHHHHHHHHHHc-----cCcccccCCCCHHHHhc
Confidence 224555666666644 55666666899998876
No 352
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.34 E-value=3.5e-12 Score=82.61 Aligned_cols=44 Identities=20% Similarity=0.252 Sum_probs=35.6
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.++..|+|||.+.+ ...++.++|+||+|++++++++|..|+...
T Consensus 169 ~~~~~y~aPE~~~~-~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 169 VVTLWYRAPELLLG-CTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred cccccccChhhhcC-CCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 35677999998732 245788999999999999999999988643
No 353
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.34 E-value=5.5e-12 Score=81.06 Aligned_cols=103 Identities=17% Similarity=0.105 Sum_probs=60.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc-----------
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED----------- 73 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 73 (133)
.++..|+|||++.+ ...++.++|+||+|++++++++|..|+....... ....+...+.....
T Consensus 172 ~~~~~~~aPE~~~~-~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T cd07837 172 IVTLWYRAPEVLLG-STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ------QLLHIFKLLGTPTEQVWPGVSKLRD 244 (295)
T ss_pred ccccCCCChHHhhC-CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH------HHHHHHHHhCCCChhhCcchhhccc
Confidence 35678999998732 2457889999999999999999998886432110 00000000000000
Q ss_pred -ccccCCCC----hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 74 -LKRHGLVT----EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 74 -~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...+.... .........+..++..||+.||.+||++.+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 245 WHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000 000112234566777799999999999999875
No 354
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.34 E-value=2.9e-12 Score=80.43 Aligned_cols=87 Identities=20% Similarity=0.251 Sum_probs=58.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.. .....+.++|+|++|++++++++|..||...... . ....+.. .....+...+..
T Consensus 153 ~~~~~~~~~Pe~~--~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~------~----~~~~~~~-~~~~~~~~~~~~ 219 (250)
T cd05123 153 FCGTPEYLAPEVL--LGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK------E----IYEKILK-DPLRFPEFLSPE 219 (250)
T ss_pred CcCCccccChHHh--CCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------H----HHHHHhc-CCCCCCCCCCHH
Confidence 4578899999987 4456788999999999999999999998643211 0 1111111 122233434443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMS 110 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~ 110 (133)
+..++..||..||++||++.
T Consensus 220 -------l~~~i~~~l~~~p~~R~~~~ 239 (250)
T cd05123 220 -------ARDLISGLLQKDPTKRLGSG 239 (250)
T ss_pred -------HHHHHHHHhcCCHhhCCCcc
Confidence 34455559999999999994
No 355
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.34 E-value=2.3e-12 Score=82.06 Aligned_cols=91 Identities=13% Similarity=0.172 Sum_probs=60.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.. ....++.++|+|++|++++++++|..|+....... ....... .....+...+..
T Consensus 182 ~~~~~~~~~Pe~~--~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~ 248 (280)
T cd05581 182 FVGTAEYVSPELL--NEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----------TFQKILK-LEYSFPPNFPPD 248 (280)
T ss_pred ccCCccccCHHHh--CCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH----------HHHHHHh-cCCCCCCccCHH
Confidence 3577889999987 44567889999999999999999999987543110 1111111 111223333443
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCH----HHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSM----SKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~----~~v~~ 114 (133)
+..++..||+.+|++||++ +++++
T Consensus 249 -------~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 249 -------AKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -------HHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 4445555899999999999 77654
No 356
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.34 E-value=6.3e-12 Score=82.27 Aligned_cols=44 Identities=27% Similarity=0.395 Sum_probs=36.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
..||..|+|||.+. ....++.++|+||+|++++++++|..|+..
T Consensus 169 ~~g~~~y~aPE~~~-~~~~~~~~~Di~slGv~l~~l~~g~~pf~~ 212 (332)
T cd07857 169 YVATRWYRAPEIML-SFQSYTKAIDVWSVGCILAELLGRKPVFKG 212 (332)
T ss_pred cccCccccCcHHHh-CCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence 46888999999863 224578899999999999999999988764
No 357
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.33 E-value=1.5e-12 Score=94.28 Aligned_cols=97 Identities=19% Similarity=0.317 Sum_probs=60.7
Q ss_pred CCCCccccccCcccccccc-CccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 2 LDARGTVSYIAPEVFCRNF-GGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~-~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
|+.+||.-|+|||.+.... ..|+.|+|+||+|++++||+. ||...- +- ......++.+..+......
T Consensus 773 Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--------ER-a~iL~~LR~g~iP~~~~f~ 840 (1351)
T KOG1035|consen 773 TSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--------ER-ASILTNLRKGSIPEPADFF 840 (1351)
T ss_pred ccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchH--------HH-HHHHHhcccCCCCCCcccc
Confidence 6789999999999984322 279999999999999999986 343211 10 0123333433333221112
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+. ...-.+++...++.||++|||+.++++
T Consensus 841 ~~~----~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 841 DPE----HPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ccc----chHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 211 112223333466999999999999986
No 358
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.33 E-value=3e-12 Score=82.55 Aligned_cols=103 Identities=17% Similarity=0.089 Sum_probs=60.2
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcccccc-------
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRH------- 77 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 77 (133)
.++..|++||.+.. ...++.++|||++|++++++++|+.|+...... .....+............+
T Consensus 178 ~~~~~y~~PE~~~~-~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (302)
T cd07864 178 VITLWYRPPELLLG-EERYGPAIDVWSCGCILGELFTKKPIFQANQEL------AQLELISRLCGSPCPAVWPDVIKLPY 250 (302)
T ss_pred eeccCccChHHhcC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH------HHHHHHHHHhCCCChhhccccccccc
Confidence 34667999998732 235678999999999999999999888643211 0000011110000000000
Q ss_pred -----------CCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 78 -----------GLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 78 -----------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.............+..++..||+.||++||++.+|+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 251 FNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000011112235667777799999999999999875
No 359
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.33 E-value=9.3e-13 Score=82.11 Aligned_cols=99 Identities=19% Similarity=0.202 Sum_probs=67.7
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
+|...|||||.+......|+.++||||+|++++|+.+|+-||..-.. .-+.+.... .+.++... .+...
T Consensus 228 aGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--------vfeql~~Vv-~gdpp~l~--~~~~~ 296 (361)
T KOG1006|consen 228 AGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--------VFEQLCQVV-IGDPPILL--FDKEC 296 (361)
T ss_pred cCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--------HHHHHHHHH-cCCCCeec--Ccccc
Confidence 57788999999965555699999999999999999999999875322 111122222 22222221 12222
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
...-..+..++..|+.+|-++||...+++.
T Consensus 297 ~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 297 VHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 233345667777799999999999998864
No 360
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.33 E-value=2.5e-12 Score=82.22 Aligned_cols=45 Identities=22% Similarity=0.242 Sum_probs=36.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..++..|++||++.+ ...++.++|+|++|++++++++|..|+...
T Consensus 160 ~~~~~~y~~PE~~~~-~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 204 (284)
T cd07836 160 EVVTLWYRAPDVLLG-SRTYSTSIDIWSVGCIMAEMITGRPLFPGT 204 (284)
T ss_pred ccccccccChHHhcC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 346788999998732 235678999999999999999999988654
No 361
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.32 E-value=2.2e-13 Score=88.05 Aligned_cols=46 Identities=28% Similarity=0.252 Sum_probs=39.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGV 50 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~ 50 (133)
+.+.|.-|.|||++ .+-.++..+||||+||++.|+.+|..-|+.-.
T Consensus 268 ~iVsTRHYRAPEVi--LgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 268 TIVSTRHYRAPEVI--LGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred eeeeccccCCchhe--eccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 45778899999999 56688999999999999999999998877644
No 362
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.32 E-value=9.3e-13 Score=92.66 Aligned_cols=97 Identities=19% Similarity=0.210 Sum_probs=65.1
Q ss_pred CCCccccccCccccc---cccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC
Q 040499 3 DARGTVSYIAPEVFC---RNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL 79 (133)
Q Consensus 3 ~~~gt~~~~ape~~~---~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (133)
+.+||++|||||++. .....|+..+|+||+|++..|+..|.+|+...-+.. .+ ....+.++ |.+
T Consensus 182 T~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr----------aL-F~IpRNPP--PkL 248 (953)
T KOG0587|consen 182 TFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR----------AL-FLIPRNPP--PKL 248 (953)
T ss_pred CcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh----------hh-ccCCCCCC--ccc
Confidence 578999999999982 123368889999999999999999999986543321 11 11111111 111
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
. ......+++..++..|+.+|..+||++.+++.
T Consensus 249 k--rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 249 K--RPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred c--chhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 11233345555566699999999999998875
No 363
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.32 E-value=2.6e-12 Score=85.30 Aligned_cols=47 Identities=26% Similarity=0.346 Sum_probs=38.5
Q ss_pred CCCccccccCcccccccc--CccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNF--GGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~--~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
+.+||..|+|||++.... ..++.++|+||+|++++++++|..||...
T Consensus 202 ~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred cCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 456999999999983221 23778999999999999999999999754
No 364
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.31 E-value=9.7e-13 Score=86.98 Aligned_cols=44 Identities=32% Similarity=0.425 Sum_probs=39.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.+||..|+|||++ ....++.++|+||+|++++++++|..||...
T Consensus 196 ~~gt~~Y~APE~~--~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~ 239 (360)
T cd05627 196 TVGTPDYIAPEVF--MQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (360)
T ss_pred cCCCccccCHHHH--cCCCCCCcceeccccceeeecccCCCCCCCC
Confidence 5799999999998 5567889999999999999999999998754
No 365
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.31 E-value=4e-12 Score=79.52 Aligned_cols=82 Identities=21% Similarity=0.220 Sum_probs=53.9
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhH
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEE 84 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (133)
.++..|++||.+ ....++.++|+||+|++++++++|..++...... . ........+...+..
T Consensus 143 ~~~~~y~aPE~~--~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~- 204 (237)
T cd05576 143 AVENMYCAPEVG--GISEETEACDWWSLGAILFELLTGKTLVECHPSG-----------I----NTHTTLNIPEWVSEE- 204 (237)
T ss_pred CcCccccCCccc--CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----------c----ccccccCCcccCCHH-
Confidence 356679999987 4566788999999999999999998765432110 0 000011122333333
Q ss_pred HHHHHHHHHhhhhhccCCCCCCCCHH
Q 040499 85 EVIVRKMIIVRLWCIQTNPSDRSSMS 110 (133)
Q Consensus 85 ~~~~~~~~~l~~~cl~~~p~~Rps~~ 110 (133)
+..++..||+.||++|+++.
T Consensus 205 ------~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 205 ------ARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred ------HHHHHHHHccCCHHHhcCCC
Confidence 34455559999999999963
No 366
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.31 E-value=7.8e-12 Score=83.11 Aligned_cols=47 Identities=26% Similarity=0.332 Sum_probs=38.5
Q ss_pred CCCccccccCcccccccc--CccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNF--GGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~--~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
+.+||+.|+|||++.... ..++.++|+||+|++++++++|..||...
T Consensus 202 ~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~ 250 (371)
T cd05622 202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (371)
T ss_pred CcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC
Confidence 356999999999983221 23788999999999999999999999753
No 367
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.31 E-value=1.1e-11 Score=79.74 Aligned_cols=44 Identities=23% Similarity=0.261 Sum_probs=36.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.|+..|++||++.+ ...++.++|+||+|++++++++|..|+...
T Consensus 164 ~~~~~y~~PE~~~~-~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 164 VVTLWYRAPEILLG-SRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred ceeecccCHHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 46788999998732 245788999999999999999999988643
No 368
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.30 E-value=1.1e-11 Score=81.05 Aligned_cols=45 Identities=18% Similarity=0.234 Sum_probs=36.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..|+..|++||.+. ....++.++|+|++|++++++++|..|+...
T Consensus 165 ~~~~~~y~aPE~~~-~~~~~~~~~Dv~slG~il~el~tg~~~f~~~ 209 (328)
T cd07856 165 YVSTRYYRAPEIML-TWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK 209 (328)
T ss_pred CcccccccCceeee-ccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 45778899999862 2246788999999999999999999888543
No 369
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.29 E-value=1.5e-11 Score=78.99 Aligned_cols=97 Identities=13% Similarity=0.186 Sum_probs=60.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
..|+..|++||.+......++.++|+|++|++++++++|..|+....... . ... ....+... ....+...+.
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~---~~~-~~~~~~~~-~~~~~~~~~~- 237 (290)
T cd05613 166 FCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--S---QAE-ISRRILKS-EPPYPQEMSA- 237 (290)
T ss_pred ccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--c---HHH-HHHHhhcc-CCCCCccCCH-
Confidence 45788999999874322356788999999999999999999986432211 0 011 11111111 1112232333
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCC-----CHHHHHH
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRS-----SMSKAVE 114 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~v~~ 114 (133)
.+..++..||+.||++|+ ++.+++.
T Consensus 238 ------~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 238 ------LAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ------HHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 344555569999999997 6777765
No 370
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.29 E-value=1.3e-11 Score=79.32 Aligned_cols=44 Identities=20% Similarity=0.257 Sum_probs=35.9
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.++..|++||.+.+ ...++.++|+||+|++++++++|..||...
T Consensus 164 ~~~~~y~aPE~~~~-~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 164 VVTLWYRPPDVLLG-ATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred cccccccCCceeec-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 46788999998732 234678899999999999999999998643
No 371
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=4.8e-12 Score=84.58 Aligned_cols=106 Identities=14% Similarity=0.096 Sum_probs=70.9
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhc---CCc------
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLE---PGE------ 72 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~------ 72 (133)
|+.+-|.||.+||.+.+ ...|+..+|+||.||++.||+.|++.+.+.... ++...+...+- +..
T Consensus 277 T~rVvTLWYRpPELLLG-~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv------eQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 277 TSRVVTLWYRPPELLLG-ATSYGTAVDLWSVGCILAELFLGKPILQGRTEV------EQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred ccceEEeeccChHHhcC-CcccccceeehhhhHHHHHHHcCCCCcCCccHH------HHHHHHHHHhCCCChhccccccC
Confidence 55667999999999854 358999999999999999999999998875432 11111111110 000
Q ss_pred ------cccc--cCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 73 ------DLKR--HGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 73 ------~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
.+.. .....+.+..+....+.|....|..||++|.|+.+.+.
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0000 11223344455556777777788999999999998875
No 372
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.28 E-value=3.4e-12 Score=84.94 Aligned_cols=94 Identities=16% Similarity=0.279 Sum_probs=64.5
Q ss_pred CCCccccccCcccccc-c-cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCC-
Q 040499 3 DARGTVSYIAPEVFCR-N-FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGL- 79 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~-~-~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (133)
..+||+.++|||.+.. . ....+.+.|||++||++|.++.|+.||.+..... +...+.+. +...|..
T Consensus 274 ~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~----------l~~KIvn~-pL~fP~~p 342 (576)
T KOG0585|consen 274 RTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE----------LFDKIVND-PLEFPENP 342 (576)
T ss_pred hcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH----------HHHHHhcC-cccCCCcc
Confidence 3579999999998832 1 1123468999999999999999999997654322 33333221 2222332
Q ss_pred -CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 -VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 -~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+...+++++ .|.+||..|.++.+|..
T Consensus 343 e~~e~~kDli~~-------lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 343 EINEDLKDLIKR-------LLEKDPEQRITLPDIKL 371 (576)
T ss_pred cccHHHHHHHHH-------HhhcChhheeehhhhee
Confidence 45666666666 44999999999998865
No 373
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.26 E-value=1.8e-11 Score=76.30 Aligned_cols=103 Identities=15% Similarity=0.062 Sum_probs=64.8
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCcc---c-------
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGED---L------- 74 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------- 74 (133)
+-|.+|.|||.+.+ ...|...+|+||.||++.|++.+.+-+.+... .++...+...+-.... +
T Consensus 162 V~TRWYRAPELLfG-sr~Yg~~VDmWavGCI~AELllr~P~fpG~sD------idQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 162 VVTRWYRAPELLFG-SRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD------IDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred eeeeeccChHHhcc-chhcCCcchhhhHHHHHHHHHccCCCCCCCch------HHHHHHHHHHcCCCCcccCcccccccc
Confidence 56889999998754 46899999999999999999998776654422 2222222221111100 0
Q ss_pred -----cccCC-CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 75 -----KRHGL-VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 75 -----~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..|.. ....+.......++|+..++.+||.+|.+++|.+.
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 00100 01122233344577777788999999999999875
No 374
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.25 E-value=1.4e-11 Score=79.17 Aligned_cols=44 Identities=23% Similarity=0.253 Sum_probs=35.6
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.++..|+|||++.+ ...++.++|+||+|++++++++|..||...
T Consensus 164 ~~~~~~~aPE~~~~-~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 164 VVTLWYRPPDVLLG-STEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred ccccccCCcHHhhc-CcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 35778999998732 235788999999999999999999988643
No 375
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.24 E-value=4.9e-11 Score=76.58 Aligned_cols=48 Identities=21% Similarity=0.181 Sum_probs=40.8
Q ss_pred CCCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 1 ~~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
+|..+-|.+|.|||.+.+ ...|+...|+||+||++.|++.+++-|.+.
T Consensus 234 ~T~lVVTLWYRaPELLLG-~~tyst~iDMWSvGCI~aE~l~~kPlf~G~ 281 (419)
T KOG0663|consen 234 YTPLVVTLWYRAPELLLG-AKTYSTAVDMWSVGCIFAELLTQKPLFPGK 281 (419)
T ss_pred CcceEEEeeecCHHHhcC-CcccCcchhhhhHHHHHHHHHhcCCCCCCC
Confidence 456677999999998854 468999999999999999999998877654
No 376
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.23 E-value=1.7e-11 Score=80.31 Aligned_cols=46 Identities=24% Similarity=0.392 Sum_probs=37.7
Q ss_pred CCccccccCccccccc---cCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRN---FGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~---~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.+||..|+|||++... ...++.++|+||+|++++++++|+.||...
T Consensus 163 ~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 163 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 4689999999987321 145778999999999999999999998643
No 377
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.23 E-value=5.8e-11 Score=78.13 Aligned_cols=45 Identities=20% Similarity=0.214 Sum_probs=36.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
..|+..|++||.+.. ...++.++|+||+|++++++++|..||...
T Consensus 175 ~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 175 YVVTRWYRAPEVILN-WMHYTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred cccCCcccCHHHHhC-CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 457888999998731 235788999999999999999999998643
No 378
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.19 E-value=4.1e-11 Score=82.00 Aligned_cols=43 Identities=21% Similarity=0.133 Sum_probs=36.9
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCC
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGV 50 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~ 50 (133)
=+.+|.|||++ .+..|+.+.||||+||++.||++|.+-|.+..
T Consensus 350 QSRfYRAPEVI--LGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n 392 (586)
T KOG0667|consen 350 QSRFYRAPEVI--LGLPYDTAIDMWSLGCILAELFTGEPLFPGDN 392 (586)
T ss_pred eccccccchhh--ccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence 35789999999 67899999999999999999999976665443
No 379
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.14 E-value=7.7e-11 Score=75.62 Aligned_cols=111 Identities=17% Similarity=0.094 Sum_probs=67.0
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCc---------
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGE--------- 72 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 72 (133)
++.++|.+|.|||++.+ ...|+...|+||+||++.|++++++-|.+... .+....+...+....
T Consensus 178 t~evvTlWYRaPEvLlG-s~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se------~~ql~~If~~lGtP~e~~Wp~v~~ 250 (323)
T KOG0594|consen 178 TPEVVTLWYRAPEVLLG-STSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE------IDQLFRIFRLLGTPNEKDWPGVSS 250 (323)
T ss_pred cccEEEeeccCHHHhcC-CCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH------HHHHHHHHHHcCCCCccCCCCccc
Confidence 45678999999999854 33699999999999999999998877765432 111111221111110
Q ss_pred ----cccccC-----CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccC
Q 040499 73 ----DLKRHG-----LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGG 119 (133)
Q Consensus 73 ----~~~~~~-----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~ 119 (133)
....+. ...............+...|++++|.+|.|++..+. ++...
T Consensus 251 ~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 251 LPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred cccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 000000 001100111123455555688999999999998886 35544
No 380
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.14 E-value=9.7e-11 Score=81.64 Aligned_cols=110 Identities=15% Similarity=0.117 Sum_probs=55.5
Q ss_pred CCCccccccCcccccccc--------------------CccccccchhhhhHHHHHHHccCCCCCCCCCCC----CCcch
Q 040499 3 DARGTVSYIAPEVFCRNF--------------------GGISHKSDVYGFGMTVLELVGVRNNTASGVTHT----SSTEM 58 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~--------------------~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~----~~~~~ 58 (133)
.+.||+.|+|||.+.... ..+..++||||+||+++|++++..+........ .....
T Consensus 316 ~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~ 395 (566)
T PLN03225 316 EFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDY 395 (566)
T ss_pred ccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCC
Confidence 356889999999652111 123456799999999999997554432110000 00000
Q ss_pred hhhHHHHhhhcCCccccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 59 YFPDWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....|.... ............ +..........+|+..|++.||.+|||+.++++
T Consensus 396 ~~~~~~~~~-~~~~~~~~~~~~-~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 396 DLVAWRKLV-EPRASPDLRRGF-EVLDLDGGAGWELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred cHHHHHHhh-ccccchhhhhhh-hhccccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence 111111110 000000000000 000000112335677799999999999999986
No 381
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=5.8e-11 Score=80.90 Aligned_cols=93 Identities=18% Similarity=0.229 Sum_probs=71.3
Q ss_pred CCCCccccccCccccccccCcc-ccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGI-SHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~-~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
.+++|++.|.|||++. +..| ...+|+|++|++++.++.|..||++..... +..... .....++..+
T Consensus 212 qt~cgsppyAaPEl~~--g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~----------Lr~rvl-~gk~rIp~~m 278 (596)
T KOG0586|consen 212 QTFCGSPPYAAPELFN--GKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE----------LRPRVL-RGKYRIPFYM 278 (596)
T ss_pred cccCCCCCccChHhhc--CcccCCcceehhhhhhhheeeeecccccCCccccc----------ccchhe-eeeeccccee
Confidence 4689999999999983 3334 478999999999999999999999765433 111111 1233557778
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+.++.+++++++ -.+|.+|+++++++.
T Consensus 279 s~dce~lLrk~l-------vl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 279 SCDCEDLLRKFL-------VLNPSKRGPCDQIMK 305 (596)
T ss_pred echhHHHHHHhh-------ccCccccCCHHHhhh
Confidence 888888888865 889999999999975
No 382
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.12 E-value=7.5e-11 Score=76.09 Aligned_cols=46 Identities=17% Similarity=0.187 Sum_probs=38.7
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVT 51 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~ 51 (133)
.-|.+|.|||.+.+ ...|+.+.||||.|||+.||+.|++-|.+...
T Consensus 186 icSRyYRaPELifg-a~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~ 231 (364)
T KOG0658|consen 186 ICSRYYRAPELIFG-ATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS 231 (364)
T ss_pred EEeccccCHHHHcC-ccccCceeEEhhhhHHHHHHhcCCcccCCCCH
Confidence 34778999998853 45899999999999999999999998877533
No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.11 E-value=5.5e-11 Score=79.28 Aligned_cols=97 Identities=21% Similarity=0.355 Sum_probs=65.1
Q ss_pred CCCccccccCccccccc--cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHh-hhcCCccccc--c
Q 040499 3 DARGTVSYIAPEVFCRN--FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYK-LLEPGEDLKR--H 77 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~--~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~ 77 (133)
...||.||++||.+-.. -...++++||||+||+++..+.|+.||...-... +.+.. -+.......+ -
T Consensus 639 QgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ--------dILqeNTIlkAtEVqFP~K 710 (775)
T KOG1151|consen 639 QGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ--------DILQENTILKATEVQFPPK 710 (775)
T ss_pred ccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH--------HHHhhhchhcceeccCCCC
Confidence 36799999999976211 2367899999999999999999999998653321 11111 1111112222 2
Q ss_pred CCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 78 GLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..++....+++++ ||++.-.+|...-++..
T Consensus 711 PvVsseAkaFIRR-------CLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 711 PVVSSEAKAFIRR-------CLAYRKEDRIDVQQLAC 740 (775)
T ss_pred CccCHHHHHHHHH-------HHHhhhhhhhhHHHHcc
Confidence 3356667777777 88999999988777653
No 384
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.06 E-value=3.4e-10 Score=76.74 Aligned_cols=106 Identities=15% Similarity=0.239 Sum_probs=70.0
Q ss_pred cccCccccccc--cC---ccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcC-CccccccCCCCh
Q 040499 9 SYIAPEVFCRN--FG---GISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEP-GEDLKRHGLVTE 82 (133)
Q Consensus 9 ~~~ape~~~~~--~~---~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 82 (133)
-|.|||.++.. .. ..+.+.|+||||++++|++.+..||.......... . +...++. +..+..|.....
T Consensus 116 lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~-----e-ii~~~~~~~~~~~rP~i~~~ 189 (484)
T KOG1023|consen 116 LWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPD-----E-IILRVKKGGSNPFRPSIELL 189 (484)
T ss_pred hccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChH-----H-HHHHHHhcCCCCcCcchhhh
Confidence 48899988431 11 24677999999999999999999998654432111 1 2222222 222222332222
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
. .....++.++.+||..+|..||++++|-..++.+...
T Consensus 190 ~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 190 N--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred h--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 1 3333688888999999999999999998888877654
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.05 E-value=4.9e-11 Score=83.88 Aligned_cols=93 Identities=15% Similarity=0.229 Sum_probs=59.6
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHcc-CCCCCCCCCCCCCcchhhhHHHHhhhcCCccccc-cCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGV-RNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKR-HGL 79 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 79 (133)
++..||-+|+|||.+ ....-...+|++|+||+++..++| ..||....... ...+........ ...
T Consensus 672 s~~sGt~GW~APE~L--~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-----------~NIl~~~~~L~~L~~~ 738 (903)
T KOG1027|consen 672 SGGSGTSGWQAPEQL--REDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-----------ANILTGNYTLVHLEPL 738 (903)
T ss_pred cCCCCcccccCHHHH--hccccCcccchhhcCceEEEEecCCccCCCchHHhh-----------hhhhcCccceeeeccC
Confidence 356799999999998 445556689999999999998885 77887543321 011111111111 111
Q ss_pred CChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 80 VTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
......+++ .++++.+|..||++.+|+.
T Consensus 739 ~d~eA~dLI-------~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 739 PDCEAKDLI-------SRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred chHHHHHHH-------HHhcCCCcccCCCHHHHhC
Confidence 111334444 4466999999999999974
No 386
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.04 E-value=4.2e-10 Score=74.41 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=64.1
Q ss_pred CCCCccccccCccccccccCccc-cccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGIS-HKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~-~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
++|||++-|.+||++ ++..|. .-+|.||+|+++|.++.|..||++..... +..-+..+... -|. .
T Consensus 210 qTFCGSPLYASPEIv--NG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~----------lvrQIs~GaYr-EP~-~ 275 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIV--NGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR----------LVRQISRGAYR-EPE-T 275 (668)
T ss_pred HHhcCCcccCCcccc--CCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH----------HHHHhhccccc-CCC-C
Confidence 579999999999999 666665 56999999999999999999998764321 22223333221 122 2
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+....-+++- ++..||++|.++.+|..
T Consensus 276 PSdA~gLIRw-------mLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 276 PSDASGLIRW-------MLMVNPERRATIEDIAS 302 (668)
T ss_pred CchHHHHHHH-------HHhcCcccchhHHHHhh
Confidence 2233333333 55889999999999875
No 387
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=8.4e-10 Score=74.06 Aligned_cols=42 Identities=26% Similarity=0.247 Sum_probs=36.3
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
+-|.-|.|||++ .+..|+..+||||++|+++||.||---|..
T Consensus 412 IQTRQYRapEVl--lGsgY~~~ADiWS~AC~~FELaTGDyLFeP 453 (590)
T KOG1290|consen 412 IQTRQYRAPEVL--LGSGYSTSADIWSTACMAFELATGDYLFEP 453 (590)
T ss_pred hhhhhccCccee--ecCCCCCchhHHHHHHHHHHhhcCceeecC
Confidence 347789999999 678999999999999999999998765544
No 388
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.01 E-value=3.3e-10 Score=82.23 Aligned_cols=95 Identities=21% Similarity=0.311 Sum_probs=66.0
Q ss_pred CCCCccccccCcccccc--cc-CccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHh-hhcCCcccccc
Q 040499 2 LDARGTVSYIAPEVFCR--NF-GGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYK-LLEPGEDLKRH 77 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~--~~-~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 77 (133)
+..+||+-|++||+++. .+ +.|..-+|+||+||++|||+.|..||+...-.. .+. +..-.....+|
T Consensus 234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslve----------TY~KIm~hk~~l~FP 303 (1317)
T KOG0612|consen 234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVE----------TYGKIMNHKESLSFP 303 (1317)
T ss_pred ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHH----------HHHHHhchhhhcCCC
Confidence 35789999999999842 22 578999999999999999999999998543211 111 11112222333
Q ss_pred --CCCChhHHHHHHHHHHhhhhhccCCCCCCCC---HHHHHH
Q 040499 78 --GLVTEEEEVIVRKMIIVRLWCIQTNPSDRSS---MSKAVE 114 (133)
Q Consensus 78 --~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~~v~~ 114 (133)
..+++...+++.+++ | +|+.|.. ++++..
T Consensus 304 ~~~~VSeeakdLI~~ll-----~---~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 304 DETDVSEEAKDLIEALL-----C---DREVRLGRNGIEDIKN 337 (1317)
T ss_pred cccccCHHHHHHHHHHh-----c---ChhhhcccccHHHHHh
Confidence 447888889998876 4 4556665 888865
No 389
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.97 E-value=6.7e-10 Score=77.00 Aligned_cols=99 Identities=23% Similarity=0.278 Sum_probs=64.0
Q ss_pred CCCccccccCccccc-cccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 3 DARGTVSYIAPEVFC-RNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~-~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
++.||++|||||+-. +..+.|+.++|+|+.|+...|+...++|....-... ..+ ......-.......+..++
T Consensus 171 sfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr----~l~--LmTkS~~qpp~lkDk~kws 244 (829)
T KOG0576|consen 171 SFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR----ALF--LMTKSGFQPPTLKDKTKWS 244 (829)
T ss_pred cccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH----HHH--HhhccCCCCCcccCCccch
Confidence 578999999999862 234578999999999999999988777754322211 000 0001111111112234456
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+.+.++++. |+.++|++||+++.++.
T Consensus 245 ~~fh~fvK~-------altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 245 EFFHNFVKG-------ALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHHHH-------HhcCCCccCCChhhhee
Confidence 666666665 88999999999988764
No 390
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.96 E-value=1.3e-09 Score=75.70 Aligned_cols=81 Identities=22% Similarity=0.348 Sum_probs=55.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.+||..|+|||++ ....|+..+|+|+.||+++||+-|+.||....... .......|...+ ....-...+.
T Consensus 830 slvgt~nyiapevl--~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~--tq~kv~nw~~~l-----~~~~~~~ls~ 900 (1034)
T KOG0608|consen 830 SLVGTPNYIAPEVL--ARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGE--TQYKVINWRNFL-----HIPYQGNLSK 900 (1034)
T ss_pred hhcCCCcccChHHh--cccCccccchhhHhhHHHHHHhhCCCCccCCCCCc--ceeeeeehhhcc-----ccccccccCH
Confidence 46899999999999 56688999999999999999999999998765543 222233332211 1111223456
Q ss_pred hHHHHHHHHH
Q 040499 83 EEEVIVRKMI 92 (133)
Q Consensus 83 ~~~~~~~~~~ 92 (133)
++.+++.+++
T Consensus 901 e~~~li~kLc 910 (1034)
T KOG0608|consen 901 EALDLIQKLC 910 (1034)
T ss_pred HHHHHHHHHh
Confidence 6666666654
No 391
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.88 E-value=3.3e-09 Score=68.27 Aligned_cols=105 Identities=11% Similarity=0.228 Sum_probs=67.1
Q ss_pred CCCCccccccCcccccc---ccCccccccchhhhhHHHHHHHccCCCCCCCCCC-C---CCcc-hhhhHHHHhhhcCCcc
Q 040499 2 LDARGTVSYIAPEVFCR---NFGGISHKSDVYGFGMTVLELVGVRNNTASGVTH-T---SSTE-MYFPDWFYKLLEPGED 73 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~---~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~-~---~~~~-~~~~~~~~~~~~~~~~ 73 (133)
.+.+|+.-|||||++.. ..--|+.++|.||+|+++|-|++|.+||.+.-.. . ..+. ..=...+...+.++..
T Consensus 244 ~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkY 323 (463)
T KOG0607|consen 244 LTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKY 323 (463)
T ss_pred cCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCC
Confidence 46789999999998732 2235888999999999999999999999765321 1 1111 1111223333344332
Q ss_pred ccccC----CCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 74 LKRHG----LVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 74 ~~~~~----~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..|+ -++....+++..++ ..|+.+|.++.++++
T Consensus 324 -eFPdkdWahIS~eakdlisnLl-------vrda~~rlsa~~vln 360 (463)
T KOG0607|consen 324 -EFPDKDWAHISSEAKDLISNLL-------VRDAKQRLSAAQVLN 360 (463)
T ss_pred -cCChhhhHHhhHHHHHHHHHHH-------hccHHhhhhhhhccC
Confidence 1222 13444555555544 799999999999886
No 392
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.83 E-value=9e-09 Score=64.37 Aligned_cols=106 Identities=10% Similarity=0.062 Sum_probs=64.5
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccc----------
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDL---------- 74 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 74 (133)
+-|.+|..||.+.+ ...|..+.|+|..||++.|+.++.+.+++..... ....+..+...+.....+
T Consensus 189 vvTLwYrppEllLG-~r~yg~~iDiWgAgCimaeMwtrspimqgnteqq---ql~~Is~LcGs~tkevWP~~d~lpL~~s 264 (376)
T KOG0669|consen 189 VVTLWYRPPELLLG-DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQ---QLHLISQLCGSITKEVWPNVDNLPLYQS 264 (376)
T ss_pred eeeeecCCHHHhhc-ccccCCcchhHhHHHHHHHHHccCccccCChHHH---HHHHHHHHhccCCcccCCCcccchHHHh
Confidence 44899999998853 5688999999999999999999988877543321 111111111111111110
Q ss_pred ----cccCCCChhHHHHHH------HHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 75 ----KRHGLVTEEEEVIVR------KMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 75 ----~~~~~~~~~~~~~~~------~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+...-....+..+ ..+.|+...+..||.+|+.++++++
T Consensus 265 ie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 265 IELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred ccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 011111111122222 4556666677999999999999875
No 393
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.78 E-value=1.8e-08 Score=64.75 Aligned_cols=46 Identities=22% Similarity=0.227 Sum_probs=38.5
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGV 50 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~ 50 (133)
.+-|++|.|||.+.+ ...|+...|+|++||++.|+++.++-|.+..
T Consensus 199 VVVTiWYRAPELLLG-a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E 244 (438)
T KOG0666|consen 199 VVVTIWYRAPELLLG-ARHYTKAIDVWAIGCIFAELLTLEPLFKGRE 244 (438)
T ss_pred eEEEEEecChHHhcc-cccccchhhhHHHHHHHHHHHccCccccchh
Confidence 456899999998853 4589999999999999999999888776543
No 394
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.74 E-value=2.6e-08 Score=63.90 Aligned_cols=45 Identities=27% Similarity=0.205 Sum_probs=38.1
Q ss_pred CCCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCC
Q 040499 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTA 47 (133)
Q Consensus 1 ~~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~ 47 (133)
||.++.|..|.|||++.+ -.|...+||||.||++-||+.|.--|.
T Consensus 174 mtpyVvtRyyrapevil~--~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 174 MTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred cCchhheeeccCchheec--cCCcccchhhhhhhHHHHHhhceEEec
Confidence 567788999999999943 458999999999999999998876554
No 395
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=98.74 E-value=5.3e-09 Score=72.83 Aligned_cols=51 Identities=22% Similarity=0.266 Sum_probs=44.0
Q ss_pred CCCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCC
Q 040499 1 MLDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTH 52 (133)
Q Consensus 1 ~~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~ 52 (133)
+++++||.-|++||.+.+ .+.|+..+|.|||||++|+..+|..||......
T Consensus 180 ~~S~vGT~~YLhPel~E~-q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 180 FTSLVGTEEYLHPELYER-QKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred eeeecCchhhcChHHHhh-ccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 467899999999999821 478999999999999999999999999876544
No 396
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.73 E-value=5.1e-09 Score=71.18 Aligned_cols=41 Identities=22% Similarity=0.137 Sum_probs=35.6
Q ss_pred cccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 7 TVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 7 t~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
+.+|.|||++ .+..|+...|+||+||.+||+.+|+.-|.+.
T Consensus 598 SRFYRaPEIi--LG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 598 SRFYRAPEII--LGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred HHhccCccee--ecCcccCCccceeeceeeEEeeccceecCCC
Confidence 4579999999 6779999999999999999999998776543
No 397
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=98.71 E-value=1.4e-08 Score=68.70 Aligned_cols=38 Identities=32% Similarity=0.509 Sum_probs=34.6
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHc
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG 41 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~ 41 (133)
+.-+||..||+||-+ .+..|+.++|||++|++++|++.
T Consensus 420 t~~~gt~~YmsPEQi--~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 420 TQQVGTLLYMSPEQI--RGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhcccccccCCHHHH--hhhhhhhhcchhhHHHHHHHHHH
Confidence 456799999999998 67899999999999999999986
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.67 E-value=3.9e-08 Score=59.70 Aligned_cols=61 Identities=31% Similarity=0.425 Sum_probs=48.8
Q ss_pred CCccccccCccccccccC-ccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 4 ARGTVSYIAPEVFCRNFG-GISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~-~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
..+...|++||.. ... ..+.+.|+|++|++++++
T Consensus 153 ~~~~~~~~~pe~~--~~~~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVL--LGKGYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHh--cccCCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 3466789999987 333 677889999999999988
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
..+..++..|++.+|++||++.++++.
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 245556666999999999999998864
No 399
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=98.66 E-value=1.7e-09 Score=73.78 Aligned_cols=93 Identities=17% Similarity=0.199 Sum_probs=60.7
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCCh
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTE 82 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (133)
+.+||+.|+|||++ ....|+...|+||+|+++|-.++|.-||.....- -+ ..+...-..++..=..++.
T Consensus 725 sVVGTPAYLaPEVL--rnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI--------nd-QIQNAaFMyPp~PW~eis~ 793 (888)
T KOG4236|consen 725 SVVGTPAYLAPEVL--RNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI--------ND-QIQNAAFMYPPNPWSEISP 793 (888)
T ss_pred hhcCCccccCHHHH--hhccccccccceeeeEEEEEEecccccCCCccch--------hH-HhhccccccCCCchhhcCH
Confidence 56899999999999 5678999999999999999999999998654221 00 1111111111111122345
Q ss_pred hHHHHHHHHHHhhhhhccCCCCCCCCHHHHH
Q 040499 83 EEEVIVRKMIIVRLWCIQTNPSDRSSMSKAV 113 (133)
Q Consensus 83 ~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~ 113 (133)
...+++..++ +..-.+|.+.++-+
T Consensus 794 ~AidlIn~LL-------qVkm~kRysvdk~l 817 (888)
T KOG4236|consen 794 EAIDLINNLL-------QVKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHHHHHH-------HHHHHHhcchHhhc
Confidence 5555555544 66677888877654
No 400
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=98.63 E-value=1.1e-08 Score=67.37 Aligned_cols=46 Identities=26% Similarity=0.366 Sum_probs=37.4
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGV 50 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~ 50 (133)
..||++|.|||++.. ...=+.++||||.|++++.++++..||....
T Consensus 237 rAGT~GfRaPEvL~k-~~~QttaiDiws~GVI~Lslls~~~PFf~a~ 282 (418)
T KOG1167|consen 237 RAGTPGFRAPEVLFR-CPRQTTAIDIWSAGVILLSLLSRRYPFFKAK 282 (418)
T ss_pred cCCCCCCCchHHHhh-ccCcCCccceeeccceeehhhccccccccCc
Confidence 469999999999853 2344678999999999999999998875443
No 401
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.52 E-value=5.6e-08 Score=68.39 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=68.7
Q ss_pred CCCCccccccCccccccccCccc-cccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGIS-HKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLV 80 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~-~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (133)
..++|+-.|+|||++ ....|. ...||||.|+++..|..++.||........ . + ... ............
T Consensus 482 ~g~~gS~pY~apE~~--~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~--~--~----~~~-~~~~~~~~~~~~ 550 (601)
T KOG0590|consen 482 SGIVGSDPYLAPEVL--TGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDN--S--F----KTN-NYSDQRNIFEGP 550 (601)
T ss_pred cCcccCCcCcCcccc--cccccCcchhhhhhccceEEEEecCCCcccccccccc--c--h----hhh-ccccccccccCh
Confidence 357899999999998 345555 568999999999999999888865433211 0 0 000 000000111111
Q ss_pred ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH--HHccCccC
Q 040499 81 TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE--MLEGGLEA 122 (133)
Q Consensus 81 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~--~l~~~~~~ 122 (133)
......+......++.+.++.||.+|.++++|++ +++.+...
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c 594 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECC 594 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceE
Confidence 2223344445556666678999999999999986 66655443
No 402
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.50 E-value=6.8e-08 Score=58.85 Aligned_cols=46 Identities=37% Similarity=0.456 Sum_probs=37.4
Q ss_pred CccccccCccccc--cccCccccccchhhhhHHHHHHHccCCCCCCCC
Q 040499 5 RGTVSYIAPEVFC--RNFGGISHKSDVYGFGMTVLELVGVRNNTASGV 50 (133)
Q Consensus 5 ~gt~~~~ape~~~--~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~ 50 (133)
.|.-.|||||.+. .+...|+.++||||+|+.+.|+.++.-||..-.
T Consensus 209 aGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 209 AGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred cCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 3556799999882 233479999999999999999999999987543
No 403
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.43 E-value=1.7e-07 Score=59.52 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=39.1
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVT 51 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~ 51 (133)
..+-|-+|.|||.+.+ ...|+...||||+||++-|++.++.-|+...+
T Consensus 216 qEVVTQYYRAPEiLMG-aRhYs~AvDiWSVGCIFaELLgRrILFQAq~P 263 (449)
T KOG0664|consen 216 HEVVTQYYRAPELLMG-ARRYTGAVDIWSVGCIFAELLQRKILFQAAGP 263 (449)
T ss_pred HHHHHHHhccHHHhhc-chhhcCccceehhhHHHHHHHhhhhhhhccCh
Confidence 3445778999999854 46899999999999999999988877776544
No 404
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=98.41 E-value=1.2e-06 Score=60.70 Aligned_cols=101 Identities=16% Similarity=0.112 Sum_probs=52.6
Q ss_pred ccccccCccccccccC--------------------ccccccchhhhhHHHHHHHccCC-CCCCCCCCC---CCcchhhh
Q 040499 6 GTVSYIAPEVFCRNFG--------------------GISHKSDVYGFGMTVLELVGVRN-NTASGVTHT---SSTEMYFP 61 (133)
Q Consensus 6 gt~~~~ape~~~~~~~--------------------~~~~~~dv~s~g~~~~~l~~~~~-p~~~~~~~~---~~~~~~~~ 61 (133)
+|+.|++||.+..... ....+.|+||+|+++++++.+.. |+....... ........
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~ 451 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN 451 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH
Confidence 3678999998732110 11134799999999999998765 554321110 00011111
Q ss_pred HHHHhhhcCCccccccCCCChhHHHHHHHHHHhhhhhccCCC---CCCCCHHHHHH
Q 040499 62 DWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNP---SDRSSMSKAVE 114 (133)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p---~~Rps~~~v~~ 114 (133)
.|.... ............++...+++.++ +..++ .+|+|+++++.
T Consensus 452 ~~r~~~-~~~~~~~~~d~~s~~~~dLi~~L-------L~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 452 RWRMYK-GQKYDFSLLDRNKEAGWDLACKL-------ITKRDQANRGRLSVGQALS 499 (507)
T ss_pred HHHhhc-ccCCCcccccccChHHHHHHHHH-------hccCCCCcccCCCHHHHhC
Confidence 221110 00111111223455555566654 45544 78999999875
No 405
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.33 E-value=6.4e-07 Score=65.56 Aligned_cols=88 Identities=20% Similarity=0.269 Sum_probs=59.5
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcC-CccccccCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEP-GEDLKRHGLVT 81 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (133)
..+||+.|.|||++ ....|...+|+|++|++++|.+-|+-||.+...... +...+.. ...+....-.+
T Consensus 217 qvcgTPeyiaPeVi--lrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel---------fg~visd~i~wpE~dea~p 285 (1205)
T KOG0606|consen 217 QVCGTPEYIAPEVI--LRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL---------FGQVISDDIEWPEEDEALP 285 (1205)
T ss_pred cccCCccccChhhh--hhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH---------HhhhhhhhccccccCcCCC
Confidence 35899999999999 556799999999999999999999999877633221 1111111 11111223345
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCC
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSS 108 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps 108 (133)
.+.++++..|+ +.+|..|..
T Consensus 286 ~Ea~dli~~LL-------~qnp~~Rlg 305 (1205)
T KOG0606|consen 286 PEAQDLIEQLL-------RQNPLCRLG 305 (1205)
T ss_pred HHHHHHHHHHH-------HhChHhhcc
Confidence 66667777755 778888853
No 406
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=98.28 E-value=3e-06 Score=56.59 Aligned_cols=91 Identities=19% Similarity=0.158 Sum_probs=63.7
Q ss_pred ccccccCcccccc---ccCc-cccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 6 GTVSYIAPEVFCR---NFGG-ISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 6 gt~~~~ape~~~~---~~~~-~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
|.-..||||+... .... .-.++|.|+.|.+.||++....||+..+.... -...+.+..-+..|+.++
T Consensus 413 GNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L---------~~r~Yqe~qLPalp~~vp 483 (598)
T KOG4158|consen 413 GNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL---------DTRTYQESQLPALPSRVP 483 (598)
T ss_pred CcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee---------chhhhhhhhCCCCcccCC
Confidence 6677899998621 1111 22589999999999999999999987544321 111244455666677788
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKA 112 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v 112 (133)
....+++..++ +.||++|++..-.
T Consensus 484 p~~rqlV~~lL-------~r~pskRvsp~iA 507 (598)
T KOG4158|consen 484 PVARQLVFDLL-------KRDPSKRVSPNIA 507 (598)
T ss_pred hHHHHHHHHHh-------cCCccccCCccHH
Confidence 87777777755 9999999986543
No 407
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=98.17 E-value=1.3e-06 Score=64.48 Aligned_cols=88 Identities=23% Similarity=0.246 Sum_probs=51.8
Q ss_pred cccccCcccccccc---------CccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCc--cc
Q 040499 7 TVSYIAPEVFCRNF---------GGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGE--DL 74 (133)
Q Consensus 7 t~~~~ape~~~~~~---------~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 74 (133)
-.+|+|||.+-... ..+..+=||+|.||++.|++. |.++|.-. ..-.++.+. .+
T Consensus 190 RtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--------------QL~aYr~~~~~~~ 255 (1431)
T KOG1240|consen 190 RTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--------------QLLAYRSGNADDP 255 (1431)
T ss_pred eeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH--------------HHHhHhccCccCH
Confidence 35799999872100 125667899999999999976 56666411 000011110 00
Q ss_pred -cccCCC-ChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHH
Q 040499 75 -KRHGLV-TEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEM 115 (133)
Q Consensus 75 -~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~ 115 (133)
..-+.+ .. .+.+|++.+++.||++|.++++.++.
T Consensus 256 e~~Le~Ied~-------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 256 EQLLEKIEDV-------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHhCcCc-------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 000111 12 34445555779999999999999876
No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.12 E-value=1.8e-06 Score=59.95 Aligned_cols=40 Identities=33% Similarity=0.483 Sum_probs=36.1
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
|||.-|||||++ + .....+|.|++|++.+++++|..||..
T Consensus 154 cgt~eymApEI~--~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 154 CGTYEYRAPEII--N--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ccchhhhhhHhh--h--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 789999999998 3 457789999999999999999999876
No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.08 E-value=3.2e-06 Score=52.03 Aligned_cols=44 Identities=27% Similarity=0.448 Sum_probs=36.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
..++..|++||.+. ....++.++|+|++|++++++++|+.||..
T Consensus 159 ~~~~~~~~~pe~~~-~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 159 VKGTPFYLAPEVLL-GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eeccCCcCCHhHhc-CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 45677899999863 345667799999999999999999999965
No 410
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.94 E-value=1e-05 Score=50.43 Aligned_cols=43 Identities=12% Similarity=0.288 Sum_probs=34.0
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
.+..|-.||.+- ....|+.+.|+|||||++.+++..+.||...
T Consensus 194 ASRyfKGPELLV-dy~~YDYSLD~WS~GcmlA~miFrkepFFhG 236 (338)
T KOG0668|consen 194 ASRYFKGPELLV-DYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 236 (338)
T ss_pred ehhhcCCchhee-echhccccHHHHHHHHHHHHHHhccCcccCC
Confidence 455677888652 3457889999999999999999988887654
No 411
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=97.87 E-value=2.5e-06 Score=59.22 Aligned_cols=44 Identities=27% Similarity=0.339 Sum_probs=36.5
Q ss_pred CCCccccccCccccccccCccc-cccchhhhhHHHHHHHccCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGIS-HKSDVYGFGMTVLELVGVRNNTAS 48 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~-~~~dv~s~g~~~~~l~~~~~p~~~ 48 (133)
.++||..|.|||++. +..|- ...|||++|+++|.++....||..
T Consensus 727 ~f~gtv~~aapevl~--g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 727 VFVGTVDYAAPEVLG--GEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eeeeeccccchhhhC--CCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 578999999999983 44444 568999999999999998888863
No 412
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.82 E-value=7.6e-05 Score=44.99 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=33.7
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNT 46 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~ 46 (133)
.+-|.+|.+|.++.+ -.-|+...|+||.||++.|+.....|.
T Consensus 161 evvtlwyrppdvlfg-akly~tsidmwsagcifaelanagrpl 202 (292)
T KOG0662|consen 161 EVVTLWYRPPDVLFG-AKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_pred eeeeeeccCcceeee-eehhccchHhhhcchHHHHHhhcCCCC
Confidence 456889999998843 357889999999999999998755554
No 413
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.46 E-value=8.7e-05 Score=47.49 Aligned_cols=92 Identities=14% Similarity=0.179 Sum_probs=51.5
Q ss_pred ccccCccccccc---cCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccC---CCC
Q 040499 8 VSYIAPEVFCRN---FGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHG---LVT 81 (133)
Q Consensus 8 ~~~~ape~~~~~---~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 81 (133)
..|-+||.+... .-......|+|.||++++.+++|+.|++.....+ .....+..|. .+..+..|. ..+
T Consensus 184 ~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d-~~Y~~~~~w~-----~rk~~~~P~~F~~fs 257 (378)
T KOG1345|consen 184 NNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD-KPYWEWEQWL-----KRKNPALPKKFNPFS 257 (378)
T ss_pred cccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC-chHHHHHHHh-----cccCccCchhhcccC
Confidence 346778765211 1134567999999999999999999998432221 0112222332 222223333 334
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKA 112 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v 112 (133)
+....+.++ -+..++++|=-..++
T Consensus 258 ~~a~r~Fkk-------~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 258 EKALRLFKK-------SLTPRFKDRCKIWTA 281 (378)
T ss_pred HHHHHHHHH-------hcCCcccccchhHHH
Confidence 444444444 558888888444443
No 414
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=97.42 E-value=0.0003 Score=52.40 Aligned_cols=88 Identities=14% Similarity=0.217 Sum_probs=59.6
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccc--cccCCCC
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDL--KRHGLVT 81 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 81 (133)
.+||..|.+||.. .+......+|+|++|+++++.++|..|+....... ..+.+..+..+ ..+....
T Consensus 995 ~~~t~~~laPe~~--lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~----------~f~ni~~~~~~~p~g~~~~s 1062 (1205)
T KOG0606|consen 995 VVGTPDYLAPEIL--LGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ----------IFENILNRDIPWPEGPEEGS 1062 (1205)
T ss_pred ccCCCcccCCccc--ccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh----------hhhccccCCCCCCCCccccC
Confidence 5699999999988 55677888999999999999999999987655433 22222222222 2244445
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMS 110 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~ 110 (133)
....+....++ ..++.+|..+.
T Consensus 1063 ~~aq~~~~~ll-------~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1063 YEAQDLINRLL-------TEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhhhhhh-------ccCchhccCcc
Confidence 55555555533 77777887654
No 415
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.38 E-value=0.0012 Score=42.53 Aligned_cols=48 Identities=29% Similarity=0.361 Sum_probs=38.1
Q ss_pred CCCCccccccCcccccccc-CccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 2 LDARGTVSYIAPEVFCRNF-GGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~-~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
....||..|++||.+.... ..+....|+|++|+++++++.+..|+...
T Consensus 166 ~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~ 214 (384)
T COG0515 166 STSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGE 214 (384)
T ss_pred cccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 3467999999999883211 57788999999999999999998885443
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.22 E-value=0.00023 Score=46.10 Aligned_cols=43 Identities=21% Similarity=0.271 Sum_probs=29.8
Q ss_pred cccccCcccccc------ccCccccccchhhhhHHHHHHHccCCCCCCC
Q 040499 7 TVSYIAPEVFCR------NFGGISHKSDVYGFGMTVLELVGVRNNTASG 49 (133)
Q Consensus 7 t~~~~ape~~~~------~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~ 49 (133)
+..|.+||.... ..-.++.+.|.|++|++++.+..+..|+...
T Consensus 205 ~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~ 253 (288)
T PF14531_consen 205 PVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLS 253 (288)
T ss_dssp -TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred CcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence 355778886521 1125778899999999999999999998754
No 417
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.25 E-value=0.0024 Score=45.74 Aligned_cols=96 Identities=15% Similarity=0.150 Sum_probs=57.3
Q ss_pred CCc-cccccCcccccccc-CccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCC
Q 040499 4 ARG-TVSYIAPEVFCRNF-GGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVT 81 (133)
Q Consensus 4 ~~g-t~~~~ape~~~~~~-~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (133)
.+| ++.|+|||.. .+ .......|+||.|+++..++++..|+....... .....|.... .......-..+.
T Consensus 188 ~~g~s~~y~a~E~~--~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~ 259 (601)
T KOG0590|consen 188 RCGSSPPYGAPEHL--SGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD----GRYSSWKSNK--GRFTQLPWNSIS 259 (601)
T ss_pred ccCCCCCCCCcccc--cchhhcCCCcccccccccccccccCCCCcccccccc----ccceeecccc--cccccCccccCC
Confidence 467 8999999987 33 244577899999999999999999876543322 1111111110 000011112233
Q ss_pred hhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 82 EEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 82 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
....... ..++..+++.|.+.+++..
T Consensus 260 ~~~~~~l-------~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 260 DQAHDLL-------HKILKENPSNRLSIEELKL 285 (601)
T ss_pred hhhhhcc-------cccccCCchhccccccccc
Confidence 3333333 3366789999999888753
No 418
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=96.25 E-value=0.053 Score=35.90 Aligned_cols=104 Identities=20% Similarity=0.118 Sum_probs=62.3
Q ss_pred CCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChh
Q 040499 4 ARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEE 83 (133)
Q Consensus 4 ~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (133)
+.||..|.++.+. .+...+.+-|+||++.++.++..+..|+....... ....+.......... ......+..
T Consensus 197 ~rGT~ry~S~~~H--~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~ 268 (322)
T KOG1164|consen 197 FRGTLRYASINVH--LGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD--LKSKFEKDPRKLLTD----RFGDLKPEE 268 (322)
T ss_pred CCCccccccHHHh--CCCccCCchhhhhHHHHHHHHhcCCCCCccccccc--hHHHHHHHhhhhccc----cccCCChHH
Confidence 5699999999876 55677889999999999999999999986554322 111111111111000 011112222
Q ss_pred HHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccC
Q 040499 84 EEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 84 ~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~ 122 (133)
....... +-..+...+|....+...+.+....
T Consensus 269 ~~~~~~~-------~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 269 FAKILEY-------IDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHHHHHH-------hhccCCcCCCCHHHHHHHHHHHHHh
Confidence 2222222 3357788999999888877655443
No 419
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=95.34 E-value=0.0072 Score=43.42 Aligned_cols=90 Identities=14% Similarity=0.193 Sum_probs=53.2
Q ss_pred ccccCccccccccCccccccchhhhhHHHHHHHc-cCCCCCCCCCCCCCcchhhhHHHHhhhcCCccccccCCCChhHHH
Q 040499 8 VSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVG-VRNNTASGVTHTSSTEMYFPDWFYKLLEPGEDLKRHGLVTEEEEV 86 (133)
Q Consensus 8 ~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (133)
.-|.|||++ .+...+..+|++|+|+..+-+.. |+.-+...+... .........+..........+.+..+
T Consensus 173 ~~f~apE~~--~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-------~~~~~~~~~~~~~~~~s~~~p~el~~ 243 (700)
T KOG2137|consen 173 LNFLAPEYL--LGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-------SYSFSRNLLNAGAFGYSNNLPSELRE 243 (700)
T ss_pred cccccchhh--ccccccccccceeeeeEEEEEecCCcchhhccCCcc-------hhhhhhcccccccccccccCcHHHHH
Confidence 468999998 45566788999999998887774 433333322111 00011111111111223445666777
Q ss_pred HHHHHHHhhhhhccCCCCCCCCHHHHH
Q 040499 87 IVRKMIIVRLWCIQTNPSDRSSMSKAV 113 (133)
Q Consensus 87 ~~~~~~~l~~~cl~~~p~~Rps~~~v~ 113 (133)
.+++++ ..+...||++..+.
T Consensus 244 ~l~k~l-------~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 244 SLKKLL-------NGDSAVRPTLDLLL 263 (700)
T ss_pred HHHHHh-------cCCcccCcchhhhh
Confidence 777754 88999999776654
No 420
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=95.13 E-value=0.057 Score=36.14 Aligned_cols=36 Identities=31% Similarity=0.441 Sum_probs=25.3
Q ss_pred ccccccCccccccccCccccccchhhhhHHHHHHHccC
Q 040499 6 GTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVR 43 (133)
Q Consensus 6 gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~ 43 (133)
|-++|-+|+.- ..-..+-.+|||+||...+++..+.
T Consensus 244 ~~~g~~a~~sg--~~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 244 SLPGFSAPESG--TTTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred cCCccccCCcC--cccccccchhhhhhhHHHHHHHHhe
Confidence 45677777753 3335566899999998888876543
No 421
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=93.82 E-value=0.46 Score=33.27 Aligned_cols=48 Identities=15% Similarity=0.142 Sum_probs=33.8
Q ss_pred CCccccccCccccc-c--ccCccccccchhhhhHHHHHHHcc-CCCCCCCCC
Q 040499 4 ARGTVSYIAPEVFC-R--NFGGISHKSDVYGFGMTVLELVGV-RNNTASGVT 51 (133)
Q Consensus 4 ~~gt~~~~ape~~~-~--~~~~~~~~~dv~s~g~~~~~l~~~-~~p~~~~~~ 51 (133)
.+|..-|..||.-. . .+-.-+...|.+.+++++++++.| ..||.+...
T Consensus 176 pVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~ 227 (637)
T COG4248 176 PVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPL 227 (637)
T ss_pred ccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccc
Confidence 46777899999641 0 112334678999999999998765 788877543
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=92.00 E-value=0.41 Score=32.30 Aligned_cols=49 Identities=14% Similarity=0.091 Sum_probs=38.9
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHT 53 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~ 53 (133)
+..||..||+-... .+..-+..-|.=++|-++...+.|..||++.....
T Consensus 195 SLsGTARYMSINTH--lGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~t 243 (449)
T KOG1165|consen 195 SLSGTARYMSINTH--LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADT 243 (449)
T ss_pred ccccceeeeEeecc--ccchhhhhhhHHHhhhhhhhhccCCCccccccCcc
Confidence 46789999986644 34444667788899999999999999999987765
No 423
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=85.72 E-value=0.53 Score=33.86 Aligned_cols=19 Identities=42% Similarity=0.527 Sum_probs=15.8
Q ss_pred cccchhhhhHHHHHHHccC
Q 040499 25 HKSDVYGFGMTVLELVGVR 43 (133)
Q Consensus 25 ~~~dv~s~g~~~~~l~~~~ 43 (133)
.|+|||++|.++.++.-|.
T Consensus 110 pKsdVwsl~~i~~el~L~~ 128 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGI 128 (725)
T ss_pred cchhhhhHHHHHHHHHHhh
Confidence 5899999999998876543
No 424
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=82.71 E-value=2.4 Score=30.38 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=29.3
Q ss_pred CccccccCccccccccCccccccchhhhhHHHHHHHccCC
Q 040499 5 RGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRN 44 (133)
Q Consensus 5 ~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~ 44 (133)
-|...|++||.. .+.+....|++++|.+..+...+..
T Consensus 289 ~~~~~Y~~ke~~---~~l~~~~~di~sl~ev~l~~~l~~~ 325 (524)
T KOG0601|consen 289 EGDCIYAAKELL---NGLATFASDIFSLGEVILEAILGSH 325 (524)
T ss_pred CCCceEeChhhh---ccccchHhhhcchhhhhHhhHhhcc
Confidence 356679999986 4577889999999999888766544
No 425
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=68.89 E-value=2.7 Score=31.21 Aligned_cols=42 Identities=21% Similarity=0.193 Sum_probs=33.1
Q ss_pred CCCCccccccCccccccccCccccccchhhhhHHHHHHHccCCC
Q 040499 2 LDARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNN 45 (133)
Q Consensus 2 ~~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p 45 (133)
+++.+|.-|++||+. ..+.+..+.|+|+.++-..++..+.+|
T Consensus 388 ~t~~~~~~~~~pev~--~~~~~~~~p~~~~~~~~~~~~ap~~pP 429 (829)
T KOG0576|consen 388 RTAIGTPEPLAPEVI--QENTIDGCPDSGSLAVSAIQMAPGLPP 429 (829)
T ss_pred ccCCCCCCCCCchhh--cccccccCCCccCCCcchhhcCCCCCC
Confidence 356789999999988 567889999999999876666555444
No 426
>cd00059 FH Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as monomers, are also found in the Hepatocyte nuclear factor (HNF) proteins, which provide tissue-specific gene regulation. The structure contains 2 flexible loops or "wings" in the C-terminal region, hence the term winged helix.
Probab=67.87 E-value=5.4 Score=20.75 Aligned_cols=24 Identities=21% Similarity=0.439 Sum_probs=19.3
Q ss_pred hccCCCCCCCCHHHHHHHHccCcc
Q 040499 98 CIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 98 cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+...|+++.|+.||.+.+++...
T Consensus 13 Ai~~sp~~~lTL~eIy~~I~~~~p 36 (78)
T cd00059 13 AIQSSPEKRLTLSEIYKWISDNFP 36 (78)
T ss_pred HHHhCCCCCeeHHHHHHHHHHhCC
Confidence 456689999999999998876543
No 427
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=61.99 E-value=2.6 Score=27.39 Aligned_cols=49 Identities=14% Similarity=0.026 Sum_probs=34.6
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCCCCCCCCCCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRNNTASGVTHT 53 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~p~~~~~~~~ 53 (133)
...||..|.+-... .+..-+..-|+=|+|.++..+-.|..|+++..+..
T Consensus 180 ~ltGTaRYASinAh--~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t 228 (341)
T KOG1163|consen 180 NLTGTARYASINAH--LGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT 228 (341)
T ss_pred ccceeeeehhhhhh--hhhhhhhhhhhhhhcceeeeeecCCCcccccchhh
Confidence 35688888665433 22233556678899999988888999999876643
No 428
>smart00339 FH FORKHEAD. FORKHEAD, also known as a "winged helix"
Probab=57.94 E-value=12 Score=19.94 Aligned_cols=24 Identities=21% Similarity=0.430 Sum_probs=18.9
Q ss_pred hccCCCCCCCCHHHHHHHHccCcc
Q 040499 98 CIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 98 cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
.+...|+++.++.+|.+.+++...
T Consensus 13 ai~~sp~~~ltl~~Iy~~I~~~~p 36 (89)
T smart00339 13 AILSSPDKRLTLSEIYKWIEDNFP 36 (89)
T ss_pred HHHhCCCCCeeHHHHHHHHHHhCc
Confidence 446679999999999998876543
No 429
>PF08247 ENOD40: ENOD40 protein; InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []. The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].
Probab=56.47 E-value=2.5 Score=13.42 Aligned_cols=7 Identities=29% Similarity=0.473 Sum_probs=4.2
Q ss_pred hhhccCC
Q 040499 96 LWCIQTN 102 (133)
Q Consensus 96 ~~cl~~~ 102 (133)
..||++.
T Consensus 2 ~l~wqks 8 (12)
T PF08247_consen 2 ELCWQKS 8 (12)
T ss_pred ceeEeee
Confidence 3488753
No 430
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=51.58 E-value=41 Score=26.62 Aligned_cols=40 Identities=15% Similarity=0.022 Sum_probs=32.5
Q ss_pred CCCccccccCccccccccCccccccchhhhhHHHHHHHccCC
Q 040499 3 DARGTVSYIAPEVFCRNFGGISHKSDVYGFGMTVLELVGVRN 44 (133)
Q Consensus 3 ~~~gt~~~~ape~~~~~~~~~~~~~dv~s~g~~~~~l~~~~~ 44 (133)
..++|-.+-++|+. .+...+...|.|.++.+++-|+.|+-
T Consensus 862 ~~~~td~f~C~EM~--~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 862 AVWHTDLFDCIEMR--EGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eeeccccchhHHHh--cCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 45567788888987 66788899999999999999887754
No 431
>PF09713 A_thal_3526: Plant protein 1589 of unknown function (A_thal_3526); InterPro: IPR006476 This plant-specific family of proteins are defined by an uncharacterised region 57 residues in length. It is found toward the N terminus of most proteins that contain it. Examples include at least several proteins from Arabidopsis thaliana (Mouse-ear cress) and Oryza sativa (Rice). The function of the proteins are unknown.
Probab=47.61 E-value=15 Score=17.67 Aligned_cols=23 Identities=22% Similarity=0.206 Sum_probs=14.7
Q ss_pred HhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 93 IVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 93 ~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.++++|++. ..|-++++..|.+-
T Consensus 3 ~lIErCl~~----yMsk~E~v~~L~~~ 25 (54)
T PF09713_consen 3 NLIERCLQL----YMSKEECVRALQKQ 25 (54)
T ss_pred hHHHHHHHH----cCCHHHHHHHHHHH
Confidence 345567773 56777777777543
No 432
>PF00250 Fork_head: Fork head domain; InterPro: IPR001766 The fork head protein of Drosophila melanogaster, a transcription factor that promotes terminal rather than segmental development, contains neither homeodomains nor zinc-fingers characteristic of other transcription factors []. Instead, it contains a distinct type of DNA-binding region, containing around 100 amino acids, which has since been identified in a number of transcription factors (including D. melanogaster FD1-5, mammalian HNF-3, human HTLF, Saccharomyces cerevisiae HCM1, etc.). This is referred to as the fork head domain but is also known as a 'winged helix' [, , ]. The fork head domain binds B-DNA as a monomer [], but shows no similarity to previously identified DNA-binding motifs. Although the domain is found in several different transcription factors, a common function is their involvement in early developmental decisions of cell fates during embryogenesis [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2UZK_A 2K86_A 1JXS_A 2C6Y_A 2A3S_A 2D2W_A 2KIU_A 1VTN_C 2A07_J 2AS5_F ....
Probab=47.00 E-value=14 Score=19.99 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=17.8
Q ss_pred hccCCCCCCCCHHHHHHHHccC
Q 040499 98 CIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 98 cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.+.-.|..+.++.||.+.++..
T Consensus 13 Ai~~sp~~~Ltl~eIy~~i~~~ 34 (96)
T PF00250_consen 13 AILSSPDKRLTLSEIYEWIEEN 34 (96)
T ss_dssp HHHTSTTSEBEHHHHHHHHHHH
T ss_pred HHHhCCCCCccHHHHHHHHHHh
Confidence 4466899999999999988654
No 433
>PF02173 pKID: pKID domain; InterPro: IPR003102 The nuclear factor CREB activates transcription of target genes in part through direct interactions with the KIX domain of the coactivator CBP in a phosphorylation-dependent manner. CBP and P300 bind to the pKID (phosphorylated kinase-inducible-domain) domain of CREB [].; GO: 0005515 protein binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1KDX_B.
Probab=44.46 E-value=20 Score=16.13 Aligned_cols=15 Identities=27% Similarity=0.279 Sum_probs=12.4
Q ss_pred CCCCHHHHHHHHccC
Q 040499 105 DRSSMSKAVEMLEGG 119 (133)
Q Consensus 105 ~Rps~~~v~~~l~~~ 119 (133)
+||+-..|++.|..-
T Consensus 18 RRPSYRKIlndLs~~ 32 (41)
T PF02173_consen 18 RRPSYRKILNDLSSE 32 (41)
T ss_dssp TSTHHHHHHHHHHHH
T ss_pred hCchHHHHHHHhccc
Confidence 899999999988543
No 434
>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2.
Probab=40.85 E-value=20 Score=14.34 Aligned_cols=11 Identities=27% Similarity=0.302 Sum_probs=8.8
Q ss_pred CCCCCHHHHHH
Q 040499 104 SDRSSMSKAVE 114 (133)
Q Consensus 104 ~~Rps~~~v~~ 114 (133)
+.||+.+++++
T Consensus 8 ~~RP~~eeLv~ 18 (26)
T smart00707 8 SQRPTREELEE 18 (26)
T ss_pred HcCCCHHHHHH
Confidence 47999888875
No 435
>PF12263 DUF3611: Protein of unknown function (DUF3611); InterPro: IPR022051 This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 180 and 205 amino acids in length. There are two completely conserved residues (W and G) that may be functionally important.
Probab=39.15 E-value=60 Score=20.10 Aligned_cols=28 Identities=21% Similarity=0.298 Sum_probs=20.5
Q ss_pred HHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 90 KMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 90 ~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
+..+++.+.-..+|+.||+-.|+.+.|+
T Consensus 78 ry~Rlar~L~~~~~~~~P~k~~~~~~l~ 105 (183)
T PF12263_consen 78 RYTRLARRLRSPNPAKRPSKADVVRLLR 105 (183)
T ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 3445555555669999999999988765
No 436
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=36.29 E-value=21 Score=22.64 Aligned_cols=19 Identities=26% Similarity=0.169 Sum_probs=14.5
Q ss_pred CCCCCHHHHHHHHccCccC
Q 040499 104 SDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 104 ~~Rps~~~v~~~l~~~~~~ 122 (133)
..|++++++.+.|..+.+.
T Consensus 137 ~~r~~~~elk~EL~~l~~~ 155 (213)
T PF04301_consen 137 PPRRSFEELKEELAALYEF 155 (213)
T ss_pred CcCCCHHHHHHHHHHHHHH
Confidence 4688899998888877544
No 437
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=36.23 E-value=5.9 Score=25.33 Aligned_cols=18 Identities=17% Similarity=0.253 Sum_probs=14.1
Q ss_pred ccccccchhhhhHHHHHH
Q 040499 22 GISHKSDVYGFGMTVLEL 39 (133)
Q Consensus 22 ~~~~~~dv~s~g~~~~~l 39 (133)
.|..++|+|++|+.+.-.
T Consensus 198 ~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 198 HYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred HhcccccccceeEeehHH
Confidence 466789999999876543
No 438
>PRK12482 flagellar motor protein MotA; Provisional
Probab=35.39 E-value=63 Score=21.61 Aligned_cols=35 Identities=11% Similarity=0.013 Sum_probs=25.3
Q ss_pred CCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCcc
Q 040499 78 GLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLE 121 (133)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~ 121 (133)
+..+.-+.+..++ ......||++.++-+.++++.+
T Consensus 251 G~~P~~~ve~~r~---------~i~~~~~p~f~e~e~~~~~~~~ 285 (287)
T PRK12482 251 GKPTLLAVDAGRK---------LLPLDNKPTFATLDSWINAMIT 285 (287)
T ss_pred CCCcHHHHHHHhc---------cCCCccCCCHHHHHHHHHHhhc
Confidence 3345555666666 5567899999999998887654
No 439
>PF08926 DUF1908: Domain of unknown function (DUF1908); InterPro: IPR015022 This domain is found in microtubule-associated serine/threonine-protein kinases. ; GO: 0000287 magnesium ion binding, 0004674 protein serine/threonine kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 1V9V_A.
Probab=33.28 E-value=51 Score=21.84 Aligned_cols=58 Identities=9% Similarity=0.060 Sum_probs=30.0
Q ss_pred chhhhHHHHhhhcCCccccccCCCChhHHHHHHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 57 EMYFPDWFYKLLEPGEDLKRHGLVTEEEEVIVRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
..+|.+.+...+.+...............-.-.+++.++..||++.-++-.|.....+
T Consensus 134 t~QMEErL~~fI~e~sp~~~~~~aDgv~~FihHQivElARDCL~KS~~~lITs~YF~E 191 (282)
T PF08926_consen 134 TAQMEERLQDFIDENSPDNVLPLADGVLRFIHHQIVELARDCLQKSREGLITSRYFYE 191 (282)
T ss_dssp THHHHHHHHHHHHHS-BTTTB--S-HHHHHHHHHHHHHHHHHHHHHHTT---HHHHHH
T ss_pred hHHHHHHHHHHHHHcCccccccccHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHH
Confidence 3445555555544433222222233444455668999999999998777788554443
No 440
>PF13220 DUF4028: Protein of unknown function (DUF4028)
Probab=32.98 E-value=60 Score=15.51 Aligned_cols=20 Identities=10% Similarity=0.162 Sum_probs=14.5
Q ss_pred CCCCHHHHHHHHccCccCCC
Q 040499 105 DRSSMSKAVEMLEGGLEALQ 124 (133)
Q Consensus 105 ~Rps~~~v~~~l~~~~~~~~ 124 (133)
.||++++|-....+..++..
T Consensus 40 grptfkevekdwkenresf~ 59 (65)
T PF13220_consen 40 GRPTFKEVEKDWKENRESFM 59 (65)
T ss_pred CCCcHHHHHHHHHHhhhhhc
Confidence 78999999877766555543
No 441
>PF02755 RPEL: RPEL repeat; InterPro: IPR004018 The RPEL repeat is named after four conserved amino acids it contains. The function of the RPEL repeat is unknown however it might be a DNA binding repeat based on the observation that Q9VZY2 from SWISSPROT contains a SAP domain that is also implicated in DNA binding.; PDB: 2YJE_M 2V52_M 2YJF_M 2V51_E.
Probab=32.67 E-value=36 Score=13.56 Aligned_cols=10 Identities=30% Similarity=0.435 Sum_probs=5.5
Q ss_pred CCCCHHHHHH
Q 040499 105 DRSSMSKAVE 114 (133)
Q Consensus 105 ~Rps~~~v~~ 114 (133)
.||+..++++
T Consensus 9 ~RP~~~eLv~ 18 (26)
T PF02755_consen 9 QRPTREELVE 18 (26)
T ss_dssp T---HHHHHH
T ss_pred cCCCHHHHHH
Confidence 7899888875
No 442
>cd07614 BAR_Endophilin_A2 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A2. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins are accessory proteins, localized at synapses, which interact with the endocytic proteins, dynamin and synaptojanin. They are essential for synaptic vesicle formation from the plasma membrane. They interact with voltage-gated calcium channels, thus linking vesicle endocytosis to calcium regulation. They also play roles in virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Endophilin-A proteins are enriched in the brain and play multiple roles in receptor-mediated
Probab=30.96 E-value=75 Score=20.38 Aligned_cols=40 Identities=15% Similarity=0.280 Sum_probs=23.3
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccCccCCCCC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGGLEALQVP 126 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~~~~~~~~ 126 (133)
.....++.-...|++.||..|.-.. ++..++++......+
T Consensus 21 ~~~~~l~~~t~~~LqPNp~~R~~~~-~~~~~~k~rg~~k~~ 60 (223)
T cd07614 21 KAVTEVLARTIEYLQPNPASRAKLT-MLNTVSKIRGQVKNP 60 (223)
T ss_pred HHHHHHHHHHHHHhCCCchHhHHHH-HHHHHHHHhccccCC
Confidence 4445555566668999998886543 344555444333333
No 443
>KOG3563 consensus Forkhead/HNF-3-related transcription factor [Transcription]
Probab=29.45 E-value=57 Score=22.59 Aligned_cols=30 Identities=20% Similarity=0.175 Sum_probs=24.4
Q ss_pred HHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 90 KMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 90 ~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
..+.|+.+.+|..|.+-.+++||.+++=++
T Consensus 177 SYISLITMAIQ~~pskmLTLSEIYqwIMDL 206 (454)
T KOG3563|consen 177 SYISLITMAIQQAPSKMLTLSEIYQWIMDL 206 (454)
T ss_pred hHHHHHHHHHHhCCccceeHHHHHHHHHHh
Confidence 456666667899999999999999877654
No 444
>PF14756 Pdase_C33_assoc: Peptidase_C33-associated domain
Probab=25.39 E-value=1.4e+02 Score=17.00 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=20.4
Q ss_pred HHHHhhhhh-ccCCCCCCCCHHHHHHHHccC
Q 040499 90 KMIIVRLWC-IQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 90 ~~~~l~~~c-l~~~p~~Rps~~~v~~~l~~~ 119 (133)
.++.+++.| ...|-.+|.+-++|...++..
T Consensus 77 slcqvie~ccc~qnktnr~tpeeva~kidqY 107 (147)
T PF14756_consen 77 SLCQVIEECCCSQNKTNRATPEEVAAKIDQY 107 (147)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 345555544 678888999999887655533
No 445
>PF14769 CLAMP: Flagellar C1a complex subunit C1a-32
Probab=24.21 E-value=67 Score=17.47 Aligned_cols=25 Identities=16% Similarity=0.165 Sum_probs=16.5
Q ss_pred CCCCHHHHHHHHccCccCCCCCCCC
Q 040499 105 DRSSMSKAVEMLEGGLEALQVPPKP 129 (133)
Q Consensus 105 ~Rps~~~v~~~l~~~~~~~~~~~~~ 129 (133)
.+.+..+..+.++++........+|
T Consensus 34 ~~~~~~~~~~~fk~~l~~~sv~rpp 58 (101)
T PF14769_consen 34 KGMSLEDSFKYFKELLLRHSVQRPP 58 (101)
T ss_pred ccCCHHHHHHHHHHHHHHhccCCCC
Confidence 6677888888777776555444333
No 446
>PF08189 Meleagrin: Meleagrin/Cygnin family; InterPro: IPR012573 This family consists of meleagrin and cygnin basic peptides that are isolated from turkey and black swan respectively. Both peptides are low in molecular weight and contain three disulphide bonds with high concentrations of aromatic residues. These peptides show similarity to transferrins and probably play some vital role in avian eggs but the exact function is still unknown [].
Probab=24.16 E-value=19 Score=15.65 Aligned_cols=10 Identities=40% Similarity=0.823 Sum_probs=7.2
Q ss_pred ccccchhhhh
Q 040499 24 SHKSDVYGFG 33 (133)
Q Consensus 24 ~~~~dv~s~g 33 (133)
-.+.|+|++.
T Consensus 16 CsKt~vWa~s 25 (39)
T PF08189_consen 16 CSKTDVWAFS 25 (39)
T ss_pred ccccceeeec
Confidence 3578999764
No 447
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription]
Probab=23.64 E-value=1.4e+02 Score=19.65 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=21.4
Q ss_pred HHHHHHhhhhhccCCCCCCCCHHHHHH
Q 040499 88 VRKMIIVRLWCIQTNPSDRSSMSKAVE 114 (133)
Q Consensus 88 ~~~~~~l~~~cl~~~p~~Rps~~~v~~ 114 (133)
+...+....+|...||++|..--||+.
T Consensus 133 VNEAFE~LKRrT~~NPNQRLPKVEILR 159 (284)
T KOG3960|consen 133 VNEAFETLKRRTSSNPNQRLPKVEILR 159 (284)
T ss_pred HHHHHHHHHhhcCCCccccccHHHHHH
Confidence 334667778899999999998888864
No 448
>TIGR00690 rpoZ DNA-directed RNA polymerase, omega subunit. The trusted cutoff excludes archaeal homologs but captures some organellar sequences.
Probab=23.45 E-value=66 Score=15.64 Aligned_cols=8 Identities=25% Similarity=0.576 Sum_probs=3.2
Q ss_pred CCCHHHHH
Q 040499 106 RSSMSKAV 113 (133)
Q Consensus 106 Rps~~~v~ 113 (133)
||++++++
T Consensus 2 ~psid~ll 9 (59)
T TIGR00690 2 RPTIEDAM 9 (59)
T ss_pred CCCHHHHH
Confidence 34444433
No 449
>PF01799 Fer2_2: [2Fe-2S] binding domain; InterPro: IPR002888 The [2Fe-2S] binding domain is found in a range of enzymes including dehydrogenases, oxidases and oxidoreductases. The aldehyde oxido-reductase (Mop) from the sulphate reducing anaerobic Gram-negative bacterium Desulfovibrio gigas is a homodimer of 907 amino acid residues subunits and is a member of the xanthine oxidase family. The protein contains a molybdopterin cofactor (Mo-co) and two different [2Fe-2S] centres. It is folded into four domains of which the first two bind the iron sulphur centres and the last two are involved in Mo-co binding. Mo-co is a molybdenum molybdopterin cytosine dinucleotide. Molybdopterin forms a tricyclic system with the pterin bicycle annealed to a pyran ring. The molybdopterin dinucleotide is deeply buried in the protein. The cis-dithiolene group of the pyran ring binds the molybdenum, which is coordinated by three more (oxygen) ligands [].; GO: 0016491 oxidoreductase activity, 0046872 metal ion binding, 0055114 oxidation-reduction process; PDB: 2E3T_A 1WYG_A 3AN1_B 2E1Q_C 2CKJ_A 3B9J_I 3NVY_J 1FO4_B 3NRZ_J 3AM9_A ....
Probab=22.14 E-value=1.3e+02 Score=15.54 Aligned_cols=19 Identities=26% Similarity=0.489 Sum_probs=13.1
Q ss_pred ccCCCCCCCCHHHHHHHHccC
Q 040499 99 IQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 99 l~~~p~~Rps~~~v~~~l~~~ 119 (133)
+..+| +|+-++|...|...
T Consensus 41 l~~~~--~p~~~ei~~al~gn 59 (75)
T PF01799_consen 41 LRRNP--DPTEEEIREALSGN 59 (75)
T ss_dssp HHHSS--S-CHHHHHHHTTTS
T ss_pred hhccc--chhhHHHHHHHHcC
Confidence 35554 88999998888764
No 450
>TIGR01589 A_thal_3526 uncharacterized plant-specific domain TIGR01589. This model represents an uncharacterized plant-specific domain 57 residues in length. It is found toward the N-terminus of most proteins that contain it. Examples include at least 10 proteins from Arabidopsis thaliana and at least one from Oryza sativa.
Probab=21.23 E-value=76 Score=15.50 Aligned_cols=23 Identities=26% Similarity=0.120 Sum_probs=13.1
Q ss_pred HhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 93 IVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 93 ~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.++.+|++. -.+-++++..|.+-
T Consensus 6 ~lIE~Cl~~----yMsk~E~v~~L~~~ 28 (57)
T TIGR01589 6 NRIETCIQG----YMSKEETVSFLFEN 28 (57)
T ss_pred HHHHHHHHH----HCCHHHHHHHHHHH
Confidence 445556663 34666666666543
No 451
>PF04433 SWIRM: SWIRM domain; InterPro: IPR007526 The SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in eukaryotic chromosomal proteins. It is named after the proteins SWI3, RSC8 and MOIRA in which it was first recognised. This domain is predicted to mediate protein-protein interactions in the assembly of chromatin-protein complexes. The SWIRM domain can be linked to different domains, such as the ZZ-type zinc finger (IPR000433 from INTERPRO), the Myb DNA-binding domain (IPR001005 from INTERPRO), the HORMA domain (IPR003511 from INTERPRO), the amino-oxidase domain, the chromo domain (IPR000953 from INTERPRO), and the JAB1/PAD1 domain.; GO: 0005515 protein binding; PDB: 2Z3Y_A 2UXN_A 2Y48_A 2HKO_A 2XAF_A 2X0L_A 2XAJ_A 2UXX_A 2V1D_A 2L3D_A ....
Probab=20.39 E-value=82 Score=16.41 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=20.1
Q ss_pred HHHHhhhhhccCCCCCCCCHHHHHHHHc
Q 040499 90 KMIIVRLWCIQTNPSDRSSMSKAVEMLE 117 (133)
Q Consensus 90 ~~~~l~~~cl~~~p~~Rps~~~v~~~l~ 117 (133)
.+.+.+...|..+|....+.+++.+.+.
T Consensus 37 ~iRn~il~~w~~n~~~~lt~~~~~~~i~ 64 (86)
T PF04433_consen 37 KIRNTILAEWRKNPNKYLTKTDARKLIK 64 (86)
T ss_dssp HHHHHHHHHHHHHTTS---HHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCcccHHHHHHHcc
Confidence 4666677788999999999999988776
No 452
>PF08403 AA_permease_N: Amino acid permease N-terminal; InterPro: IPR013612 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [, , ]. These proteins appear to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found to the N terminus of the amino acid permease domain (IPR004841 from INTERPRO) in metazoan Na-K-Cl cotransporters.
Probab=20.28 E-value=1.5e+02 Score=15.38 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=15.4
Q ss_pred CCCCCCHHHHHHHHccCccC
Q 040499 103 PSDRSSMSKAVEMLEGGLEA 122 (133)
Q Consensus 103 p~~Rps~~~v~~~l~~~~~~ 122 (133)
-..|||+.+|-..+++....
T Consensus 37 k~~RPSL~~Lh~~~~~~~~~ 56 (74)
T PF08403_consen 37 KKSRPSLDELHSQLEKDESH 56 (74)
T ss_pred ccCCCCHHHHHHHhhcCCCC
Confidence 45899999998888876544
No 453
>cd07615 BAR_Endophilin_A3 The Bin/Amphiphysin/Rvs (BAR) domain of Endophilin-A3. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Endophilins are accessory proteins localized at synapses that interacts with the endocytic proteins, dynamin and synaptojanin. They are essential for synaptic vesicle formation from the plasma membrane. They interact with voltage-gated calcium channels, thus linking vesicle endocytosis to calcium regulation. They also play roles in virus budding, mitochondrial morphology maintenance, receptor-mediated endocytosis inhibition, and endosomal sorting. Endophilins contain an N-terminal N-BAR domain (BAR domain with an additional N-terminal amphipathic helix), followed by a variable region containing proline clusters, and a C-terminal SH3 domain. They are classified into two types, A and B. Endophilin-A proteins are enriched in the brain and play multiple roles in receptor-mediated e
Probab=20.02 E-value=2e+02 Score=18.54 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=20.9
Q ss_pred HHHHHHHHhhhhhccCCCCCCCCHHHHHHHHccC
Q 040499 86 VIVRKMIIVRLWCIQTNPSDRSSMSKAVEMLEGG 119 (133)
Q Consensus 86 ~~~~~~~~l~~~cl~~~p~~Rps~~~v~~~l~~~ 119 (133)
.....++.=+..|++.||..|.-.. ++..++++
T Consensus 21 ~~~~~l~~~t~~~LqpNP~~r~~~~-~~~~~~k~ 53 (223)
T cd07615 21 KVVAELLSKTTEYLQPNPAYRAKLG-MLNTVSKI 53 (223)
T ss_pred HHHHHHHHHHHHHhCCCchhhHHHH-HHHHHHHH
Confidence 4455666666778999999886433 34444443
Done!