BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040501
(228 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 133/235 (56%), Gaps = 13/235 (5%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEE-LGWSR 62
+F E+ +++ HRN+++ GFC LVY Y+ NGS++ L ++ L W +
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ-PDSSNW 121
R + G A L+YLH C P I+HRD+ + N+LLD E+EA V DFG+AK + D
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNE 181
GT G++APE T K + K DV+ +GV+ LE+I G+ D L+ +++ + +L++
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD-LARLANDDDVMLLDW 259
Query: 182 ----MLDPRLPPL-SVDIRG-----KVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + +L L VD++G +V +++VA LC ++P RP M + ++L
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 132/235 (56%), Gaps = 13/235 (5%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEE-LGWSR 62
+F E+ +++ HRN+++ GFC LVY Y+ NGS++ L ++ L W +
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ-PDSSNW 121
R + G A L+YLH C P I+HRD+ + N+LLD E+EA V DFG+AK + D
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNE 181
G G++APE T K + K DV+ +GV+ LE+I G+ D L+ +++ + +L++
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD-LARLANDDDVMLLDW 251
Query: 182 ----MLDPRLPPL-SVDIRG-----KVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + +L L VD++G +V +++VA LC ++P RP M + ++L
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 117/224 (52%), Gaps = 11/224 (4%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EFLRE+ ++ +RH NIV F G T + +V EYL GSL +L+ + E+L RR
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++ +A ++YLH+ PPIVHRD+ S N+L+D +Y V DFG+++
Sbjct: 140 LSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEM- 182
AGT ++APE+ K DVYSFGV+ E+ + P L NP +V +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL------NPAQVVAAVG 252
Query: 183 LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + ++ +V +I+E C N P RP+ TI LL
Sbjct: 253 FKCKRLEIPRNLNPQVAAIIEG---CWTNEPWKRPSFATIMDLL 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 118/224 (52%), Gaps = 11/224 (4%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EFLRE+ ++ +RH NIV F G T + +V EYL GSL +L+ + E+L RR
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++ +A ++YLH+ PPIVHR++ S N+L+D +Y V DFG+++ +
Sbjct: 140 LSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS 198
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEM- 182
AGT ++APE+ K DVYSFGV+ E+ + P L NP +V +
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL------NPAQVVAAVG 252
Query: 183 LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + ++ +V +I+E C N P RP+ TI LL
Sbjct: 253 FKCKRLEIPRNLNPQVAAIIEG---CWTNEPWKRPSFATIMDLL 293
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 121/237 (51%), Gaps = 21/237 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K++F +EI V+ + +H N+V+ GF + LVY Y+ NGSL L+ L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA----KFIQPD 117
R + +G A+ +++LH + +HRDI S N+LLD + A +SDFG+A KF Q
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-- 188
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG-------KHPRDFL-SN 169
+ + GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ L
Sbjct: 189 TVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + + +D ++ V ++ VA CL RP+++ + QLL
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 120/237 (50%), Gaps = 21/237 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K++F +EI V+ + +H N+V+ GF + LVY Y+ NGSL L+ L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA----KFIQPD 117
R + +G A+ +++LH + +HRDI S N+LLD + A +SDFG+A KF Q
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-- 188
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG-------KHPRDFL-SN 169
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ L
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + + +D ++ V ++ VA CL RP+++ + QLL
Sbjct: 248 EEIEDEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 119/237 (50%), Gaps = 21/237 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K++F +EI V+ + +H N+V+ GF + LVY Y+ NGSL L+ L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA----KFIQPD 117
R + +G A+ +++LH + +HRDI S N+LLD + A +SDFG+A KF Q
Sbjct: 128 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-- 182
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG-------KHPRDFL-SN 169
GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ L
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 241
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + + +D ++ V ++ VA CL RP+++ + QLL
Sbjct: 242 EEIEDEEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 19/224 (8%)
Query: 12 LTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSV-ILNNDTSAEELGWSRRINVIKGI 70
L+ RH ++V GFC L+Y+Y+ENG+L + +D + W +R+ + G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 71 AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA-KFIQPDSSNWTEFA-GTY 128
A L YLH I+HRD+ S N+LLD + ++DFGI+ K + D ++ GT
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 129 GYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH------PRDFLSNVS---SSNPNILV 179
GY+ PE ++T K DVYSFGV+ EV+ + PR+ ++ S+ N +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 180 NEMLDPRLPPLSVDIRGKVI-SIMEVAFLCLDNNPESRPNMQTI 222
+++DP L IR + + + A CL + E RP+M +
Sbjct: 266 EQIVDPNLAD---KIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 115/237 (48%), Gaps = 21/237 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K++F +EI V + +H N+V+ GF + LVY Y NGSL L+ L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA----KFIQPD 117
R + +G A+ +++LH + +HRDI S N+LLD + A +SDFG+A KF Q
Sbjct: 125 XRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ-- 179
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG-------KHPRDFL-SN 169
+ GT Y APE A ++T K D+YSFGV+ LE+I G + P+ L
Sbjct: 180 XVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 238
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + + +D + V + VA CL RP+++ + QLL
Sbjct: 239 EEIEDEEKTIEDYIDKKXNDAD---STSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 112/231 (48%), Gaps = 33/231 (14%)
Query: 12 LTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSV-ILNNDTSAEELGWSRRINVIKGI 70
L+ RH ++V GFC L+Y+Y+ENG+L + +D + W +R+ + G
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 71 AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA----- 125
A L YLH I+HRD+ S N+LLD + ++DFGI+K TE
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK-------KGTELGQTHLX 198
Query: 126 ----GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH------PRDFLSNVS---S 172
GT GY+ PE ++T K DVYSFGV+ EV+ + PR+ ++
Sbjct: 199 XVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE 258
Query: 173 SNPNILVNEMLDPRLPPLSVDIRGKVI-SIMEVAFLCLDNNPESRPNMQTI 222
S+ N + +++DP L IR + + + A CL + E RP+M +
Sbjct: 259 SHNNGQLEQIVDPNLAD---KIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 20/223 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF +E + ++ H +VKFYG C+ ++V EY+ NG L L + E S+
Sbjct: 49 EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEP--SQL 106
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD---SSN 120
+ + + +++L +HRD++++N L+D + VSDFG+ +++ D SS
Sbjct: 107 LEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
T+F + APE+ + K ++K DV++FG+L EV GK P D +N S + V
Sbjct: 164 GTKFPVKWS--APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN---SEVVLKV 218
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
++ P L+ D +I ++ + C PE RP Q +
Sbjct: 219 SQGHRLYRPHLASD------TIYQIMYSCWHELPEKRPTFQQL 255
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 118/234 (50%), Gaps = 22/234 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN-NDTSAEELGW 60
++EFL E +++ + H NI++ G T++ ++ E++ENG+L L ND +
Sbjct: 61 RREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI-- 118
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++F++ +SS+
Sbjct: 119 -QLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 121 WTEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSN 174
TE + G + APE K T+ D +S+G++ EV+ G+ P SN
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-----YWDMSN 229
Query: 175 PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+++ D RLPP S+ ++ C + +RP + L K
Sbjct: 230 QDVINAIEQDYRLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 279
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 32/234 (13%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++ FL+E+ V+ + H N++KF G + + EY++ G+L I+ + S + WS
Sbjct: 51 QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWS 108
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFI------- 114
+R++ K IA ++YLH I+HRD++S N L+ V+DFG+A+ +
Sbjct: 109 QRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 115 -------QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDF 166
+PD G ++APE+ K DV+SFG++ E+I + D+
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225
Query: 167 LSNVSSSNPNI--LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218
L N+ ++ P PP S + C D +PE RP+
Sbjct: 226 LPRTMDFGLNVRGFLDRYCPPNCPP----------SFFPITVRCCDLDPEKRPS 269
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 117/235 (49%), Gaps = 22/235 (9%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN-NDTSAEELG 59
++EFL E +++ + H NI++ G T++ ++ E++ENG+L L ND +
Sbjct: 58 QRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI- 116
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++F++ +SS
Sbjct: 117 --QLVGMLRGIASGMRYLAEMSY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 171
Query: 120 NWTEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSS 173
+ T + G + APE K T+ D +S+G++ EV+ G+ P S
Sbjct: 172 DPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP-----YWDMS 226
Query: 174 NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
N +++ D RLPP S+ ++ C + +RP + L K
Sbjct: 227 NQDVINAIEQDYRLPPPP----DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 277
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 25/233 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND------TS 54
++K F+ E+ L+ + H NIVK YG C + LV EY E GSL +L+ T+
Sbjct: 45 ERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTA 102
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
A + W + +G+A YLH ++HRD+ N+LL + DFG A
Sbjct: 103 AHAMSWC--LQCSQGVA----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 156
Query: 114 IQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSS 173
IQ ++ T G+ ++APE+ + KCDV+S+G++ EVI + P D + +
Sbjct: 157 IQ---THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 213
Query: 174 NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
++ + + PPL ++ + S+M C +P RP+M+ I +++
Sbjct: 214 ----IMWAVHNGTRPPLIKNLPKPIESLMT---RCWSKDPSQRPSMEEIVKIM 259
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 32/243 (13%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND--------- 52
+K+F RE +LT ++H +IVKFYG C +V+EY+++G L+ L
Sbjct: 61 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 53 ----TSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDF 108
+ ELG S+ +++ IA + YL VHRD++++N L+ + DF
Sbjct: 121 GQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDF 177
Query: 109 GIAKFIQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
G+++ + S+++ G ++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 178 GMSRDVY--STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
Query: 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
LSN + PR+ P V +V C P+ R N++ I
Sbjct: 236 WFQLSNTEVIECITQGRVLERPRVCPKEV---------YDVMLGCWQREPQQRLNIKEIY 286
Query: 224 QLL 226
++L
Sbjct: 287 KIL 289
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 90.5 bits (223), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 25/233 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND------TS 54
++K F+ E+ L+ + H NIVK YG C + LV EY E GSL +L+ T+
Sbjct: 44 ERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTA 101
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
A + W + +G+A YLH ++HRD+ N+LL + DFG A
Sbjct: 102 AHAMSWC--LQCSQGVA----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155
Query: 114 IQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSS 173
IQ ++ T G+ ++APE+ + KCDV+S+G++ EVI + P D + +
Sbjct: 156 IQ---THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR 212
Query: 174 NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
++ + + PPL ++ + S+M C +P RP+M+ I +++
Sbjct: 213 ----IMWAVHNGTRPPLIKNLPKPIESLMT---RCWSKDPSQRPSMEEIVKIM 258
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+A+ ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 115/233 (49%), Gaps = 20/233 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H N++ G T + ++ E++ENGSL L + +
Sbjct: 78 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVI 135
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++F++ D+S+
Sbjct: 136 QLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNP 175
T + G + APE K T+ DV+S+G++ EV+ G+ P +N
Sbjct: 193 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-----WDMTNQ 247
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+++ D RLPP +D + +M C + RP I L K
Sbjct: 248 DVINAIEQDYRLPP-PMDCPSALHQLM---LDCWQKDRNHRPKFGQIVNTLDK 296
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 33/239 (13%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN---------- 51
+++F RE +LT ++H++IV+F+G CT R +V+EY+ +G L+ L +
Sbjct: 58 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 117
Query: 52 --DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109
D + LG + + V +A + YL VHRD++++N L+ + DFG
Sbjct: 118 GEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFG 174
Query: 110 IAKFIQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPR 164
+++ I S+++ G ++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 175 MSRDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 232
Query: 165 DFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
LSN + + E+ PR PP +V +IM C P+ R +++ +
Sbjct: 233 YQLSNTEAIDCITQGRELERPRACPP-------EVYAIMRG---CWQREPQQRHSIKDV 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 33/239 (13%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN---------- 51
+++F RE +LT ++H++IV+F+G CT R +V+EY+ +G L+ L +
Sbjct: 64 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 123
Query: 52 --DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109
D + LG + + V +A + YL VHRD++++N L+ + DFG
Sbjct: 124 GEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFG 180
Query: 110 IAKFIQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPR 164
+++ I S+++ G ++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 181 MSRDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 238
Query: 165 DFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
LSN + + E+ PR PP +V +IM C P+ R +++ +
Sbjct: 239 YQLSNTEAIDCITQGRELERPRACPP-------EVYAIMRG---CWQREPQQRHSIKDV 287
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 33/239 (13%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN---------- 51
+++F RE +LT ++H++IV+F+G CT R +V+EY+ +G L+ L +
Sbjct: 87 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 146
Query: 52 --DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109
D + LG + + V +A + YL VHRD++++N L+ + DFG
Sbjct: 147 GEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFG 203
Query: 110 IAKFIQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPR 164
+++ I S+++ G ++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 204 MSRDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPW 261
Query: 165 DFLSNVSSSNPNILVNEMLDPRL-PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
LSN + + E+ PR PP +V +IM C P+ R +++ +
Sbjct: 262 YQLSNTEAIDCITQGRELERPRACPP-------EVYAIMRG---CWQREPQQRHSIKDV 310
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 118
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 119 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 229
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 230 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 277
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 145
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 146 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 256
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 257 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 304
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 78 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 135
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 136 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 246
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 247 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 294
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 15/179 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T R + +V EY+ENGSL L T +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFTIM 151
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++G+ + YL VHRD++++NVL+D VSDFG+++ ++ D +
Sbjct: 152 QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP------RDFLSNV 170
+T G + APE ++ DV+SFGV+ EV+ G+ P RD +S+V
Sbjct: 209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 117/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V EY+ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+ + ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 15/179 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T R + +V EY+ENGSL L T +
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR--THDGQFTIM 151
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ--PDSS 119
+ + +++G+ + YL VHRD++++NVL+D VSDFG+++ ++ PD++
Sbjct: 152 QLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 120 NWTEFAGT-YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP------RDFLSNV 170
T + APE ++ DV+SFGV+ EV+ G+ P RD +S+V
Sbjct: 209 XTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 115/233 (49%), Gaps = 21/233 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EF RE+ +++ + H NIVK YG + +V E++ G L L + A + WS
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSV 123
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE-----AHVSDFGIAKFIQPD 117
++ ++ IA + Y+ + PPIVHRD+ S N+ L E A V+DFG++ Q
Sbjct: 124 KLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQS 179
Query: 118 SSNWTEFAGTYGYVAPEL--AYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNP 175
+ + G + ++APE A T K D YSF ++ ++ G+ P D S
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI 239
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
N++ E L P +P D ++ +++E LC +P+ RP+ I + L +
Sbjct: 240 NMIREEGLRPTIPE---DCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSE 286
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 21/233 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EF RE+ +++ + H NIVK YG + +V E++ G L L + A + WS
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSV 123
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE-----AHVSDFGIAKFIQPD 117
++ ++ IA + Y+ + PPIVHRD+ S N+ L E A V+DFG + Q
Sbjct: 124 KLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQS 179
Query: 118 SSNWTEFAGTYGYVAPEL--AYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNP 175
+ + G + ++APE A T K D YSF ++ ++ G+ P D S
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI 239
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
N++ E L P +P D ++ +++E LC +P+ RP+ I + L +
Sbjct: 240 NMIREEGLRPTIPE---DCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSE 286
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 8/163 (4%)
Query: 2 KKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
KKE + EI V+ E ++ NIV + ++V EYL GSL+ ++ +T +E
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE--- 115
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ V + AL +LH + ++HRDI S N+LL ++ ++DFG I P+ S
Sbjct: 116 GQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+E GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 173 RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 26/234 (11%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT---SAEEL 58
+++F+ E V+ ++ H +V+ YG C LV+E++E+G LS L +AE L
Sbjct: 44 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 103
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD- 117
+ + + ++YL C ++HRD++++N L+ VSDFG+ +F+ D
Sbjct: 104 -----LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 155
Query: 118 --SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSSN 174
SS T+F + +PE+ + ++K DV+SFGVL EV +GK P + SN
Sbjct: 156 YTSSTGTKFP--VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 213
Query: 175 PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+ PRL V ++ C PE RP + + L +
Sbjct: 214 DISTGFRLYKPRLASTHV---------YQIMNHCWKERPEDRPAFSRLLRQLAE 258
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 26/234 (11%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT---SAEEL 58
+++F+ E V+ ++ H +V+ YG C LV+E++E+G LS L +AE L
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 105
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD- 117
+ + + ++YL C ++HRD++++N L+ VSDFG+ +F+ D
Sbjct: 106 -----LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 157
Query: 118 --SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSSN 174
SS T+F + +PE+ + ++K DV+SFGVL EV +GK P + SN
Sbjct: 158 YTSSTGTKFP--VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
Query: 175 PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+ PRL V ++ C PE RP + + L +
Sbjct: 216 DISTGFRLYKPRLASTHV---------YQIMNHCWKERPEDRPAFSRLLRQLAE 260
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 114/233 (48%), Gaps = 20/233 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H N++ G T + ++ E++ENGSL L + +
Sbjct: 52 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG--QFTVI 109
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + +++GIA + YL VHR ++++N+L++ VSDFG+++F++ D+S+
Sbjct: 110 QLVGMLRGIAAGMKYLAD---MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNP 175
T + G + APE K T+ DV+S+G++ EV+ G+ P +N
Sbjct: 167 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY-----WDMTNQ 221
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+++ D RLPP +D + +M C + RP I L K
Sbjct: 222 DVINAIEQDYRLPP-PMDCPSALHQLM---LDCWQKDRNHRPKFGQIVNTLDK 270
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 110/234 (47%), Gaps = 26/234 (11%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT---SAEEL 58
+++F+ E V+ ++ H +V+ YG C LV+E++E+G LS L +AE L
Sbjct: 49 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 108
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD- 117
+ + + ++YL C ++HRD++++N L+ VSDFG+ +F+ D
Sbjct: 109 -----LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160
Query: 118 --SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSSN 174
SS T+F + +PE+ + ++K DV+SFGVL EV +GK P + SN
Sbjct: 161 YTSSTGTKFP--VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 218
Query: 175 PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+ PRL V ++ C PE RP + + L +
Sbjct: 219 DISTGFRLYKPRLASTHV---------YQIMNHCWRERPEDRPAFSRLLRQLAE 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT---SAEEL 58
+ +F+ E V+ ++ H +V+ YG C LV+E++E+G LS L +AE L
Sbjct: 66 EDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 125
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD- 117
+ + + ++YL C ++HRD++++N L+ VSDFG+ +F+ D
Sbjct: 126 -----LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 177
Query: 118 --SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSSN 174
SS T+F + +PE+ + ++K DV+SFGVL EV +GK P + SN
Sbjct: 178 YTSSTGTKFP--VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 235
Query: 175 PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+ PRL V ++ C PE RP + + L +
Sbjct: 236 DISTGFRLYKPRLASTHV---------YQIMNHCWKERPEDRPAFSRLLRQLAE 280
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 20/232 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-NNDTSAEELGW 60
+++FL E +++ + H NI+ G T + ++ EY+ENGSL L ND +
Sbjct: 74 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI-- 131
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SS 119
+ + +++GI + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 132 -QLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 187
Query: 120 NWTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPN 176
+T G + APE K T+ DV+S+G++ EV+ G+ P SN +
Sbjct: 188 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQD 242
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
++ RLPP +D I++ ++ C RP I +L K
Sbjct: 243 VIKAIEEGYRLPP-PMDC---PIALHQLMLDCWQKERSDRPKFGQIVNMLDK 290
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 28/224 (12%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EITVL++ + K+YG +++ EYL GS +L E + +
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDE----FQIATM 125
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+K I L YLH + +HRDI + NVLL + + ++DFG+A + F G
Sbjct: 126 LKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVG 182
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK------HPRDFLSNVSSSNPNILVN 180
T ++APE+ +K D++S G+ A+E+ KG+ HP L + +NP LV
Sbjct: 183 TPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVG 242
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ S E CL+ +P RP + + +
Sbjct: 243 DFTK---------------SFKEFIDACLNKDPSFRPTAKELLK 271
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 20/232 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-NNDTSAEELGW 60
+++FL E +++ + H NI+ G T + ++ EY+ENGSL L ND +
Sbjct: 53 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI-- 110
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SS 119
+ + +++GI + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 111 -QLVGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 166
Query: 120 NWTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPN 176
+T G + APE K T+ DV+S+G++ EV+ G+ P SN +
Sbjct: 167 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQD 221
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
++ RLPP +D I++ ++ C RP I +L K
Sbjct: 222 VIKAIEEGYRLPP-PMDC---PIALHQLMLDCWQKERSDRPKFGQIVNMLDK 269
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 20/232 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-NNDTSAEELGW 60
+++FL E +++ + H NI+ G T + ++ EY+ENGSL L ND +
Sbjct: 59 RRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI-- 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SS 119
+ + +++GI + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 117 -QLVGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 172
Query: 120 NWTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPN 176
+T G + APE K T+ DV+S+G++ EV+ G+ P SN +
Sbjct: 173 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP-----YWDMSNQD 227
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
++ RLPP +D I++ ++ C RP I +L K
Sbjct: 228 VIKAIEEGYRLPP-PMDC---PIALHQLMLDCWQKERSDRPKFGQIVNMLDK 275
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 117/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V E +ENGSL L + +
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVI 118
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 119 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 229
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 230 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 277
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL----------SVILNN 51
+K+F RE +LT ++H +IVKFYG C +V+EY+++G L +V++
Sbjct: 59 RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAE 118
Query: 52 DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA 111
EL S+ +++ + IA + YL VHRD++++N L+ + DFG++
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 112 KFIQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDF 166
+ + S+++ G ++ PE K T + DV+S GV+ E+ GK P
Sbjct: 176 RDVY--STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQ 233
Query: 167 LSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LSN + PR P V E+ C P R N++ I LL
Sbjct: 234 LSNNEVIECITQGRVLQRPRTCPQEV---------YELMLGCWQREPHMRKNIKGIHTLL 284
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 117/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V E +ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 117/233 (50%), Gaps = 22/233 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI++ G T ++ +V E +ENGSL L + +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA--QFTVI 147
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + +PE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD------ 258
Query: 178 LVNEMLDP--RLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
V + +D RLPP +D + +M C + +RP + I +L K
Sbjct: 259 -VIKAVDEGYRLPP-PMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILDK 306
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 112/231 (48%), Gaps = 18/231 (7%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H NI+ G T ++ +V EY+ENGSL L + +
Sbjct: 67 RRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG--QFTVI 124
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GI+ + YL VHRD++++N+L++ VSDFG+++ ++ D +
Sbjct: 125 QLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 181
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + APE K T+ DV+S+G++ EV+ G+ P ++N
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD------ 235
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
++ + + P +D + +M C SRP I +L K
Sbjct: 236 VIKAVEEGYRLPSPMDCPAALYQLM---LDCWQKERNSRPKFDEIVNMLDK 283
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 21/233 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EF RE+ +++ + H NIVK YG + +V E++ G L L + A + WS
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLD--KAHPIKWSV 123
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE-----AHVSDFGIAKFIQPD 117
++ ++ IA + Y+ + PPIVHRD+ S N+ L E A V+DF ++ Q
Sbjct: 124 KLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQS 179
Query: 118 SSNWTEFAGTYGYVAPEL--AYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNP 175
+ + G + ++APE A T K D YSF ++ ++ G+ P D S
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI 239
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
N++ E L P +P D ++ +++E LC +P+ RP+ I + L +
Sbjct: 240 NMIREEGLRPTIPE---DCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSE 286
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 109/234 (46%), Gaps = 26/234 (11%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT---SAEEL 58
+++F+ E V+ ++ H +V+ YG C LV E++E+G LS L +AE L
Sbjct: 47 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETL 106
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD- 117
+ + + ++YL C ++HRD++++N L+ VSDFG+ +F+ D
Sbjct: 107 -----LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158
Query: 118 --SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSSN 174
SS T+F + +PE+ + ++K DV+SFGVL EV +GK P + SN
Sbjct: 159 YTSSTGTKFP--VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 216
Query: 175 PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+ PRL V ++ C PE RP + + L +
Sbjct: 217 DISTGFRLYKPRLASTHV---------YQIMNHCWRERPEDRPAFSRLLRQLAE 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS TE
Sbjct: 111 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTE 165
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 221
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 222 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 2 KKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
KKE + EI V+ E ++ NIV + ++V EYL GSL+ ++ +T +E
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE--- 115
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ V + AL +LH + ++HRDI S N+LL ++ ++DFG I P+ S
Sbjct: 116 GQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 173 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 2 KKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
KKE + EI V+ E ++ NIV + ++V EYL GSL+ ++ +T +E
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE--- 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ V + AL +LH + ++HRDI S N+LL ++ ++DFG I P+ S
Sbjct: 117 GQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 174 RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E V+ + H +V+ YG CT R F++ EY+ NG L L +
Sbjct: 50 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQL 107
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD---SSN 120
+ + K + A+ YL +HRD++++N L++ + VSDFG+++++ D SS
Sbjct: 108 LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSR 164
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
++F + PE+ K ++K D+++FGVL E+ GK P + +N ++ +
Sbjct: 165 GSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---I 219
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ L P L+ + KV +IM + C + RP + +
Sbjct: 220 AQGLRLYRPHLASE---KVYTIM---YSCWHEKADERPTFKIL 256
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 2 KKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
KKE + EI V+ E ++ NIV + ++V EYL GSL+ ++ +T +E
Sbjct: 60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE--- 115
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ V + AL +LH + ++HRDI S N+LL ++ ++DFG I P+ S
Sbjct: 116 GQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 18/229 (7%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+FL E ++ + H NI++ G + + ++ EY+ENG+L L E +
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG--EFSVLQL 149
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSNWT 122
+ +++GIA + YL + VHRD++++N+L++ VSDFG+++ ++ D + +T
Sbjct: 150 VGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYT 206
Query: 123 EFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G + APE K T+ DV+SFG++ EV+ G+ P LSN + ++
Sbjct: 207 TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HEVM 260
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+ D P +D + +M C RP I +L K
Sbjct: 261 KAINDGFRLPTPMDCPSAIYQLM---MQCWQQERARRPKFADIVSILDK 306
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 26/226 (11%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E V+ + H +V+ YG CT R F++ EY+ NG L L +
Sbjct: 49 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQL 106
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+ + K + A+ YL +HRD++++N L++ + VSDFG+++++ D E
Sbjct: 107 LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----E 158
Query: 124 FAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPN 176
+ + G + PE+ K ++K D+++FGVL E+ GK P + +N ++
Sbjct: 159 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH- 217
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ + L P L+ + KV +IM + C + RP + +
Sbjct: 218 --IAQGLRLYRPHLASE---KVYTIM---YSCWHEKADERPTFKIL 255
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 26/226 (11%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E V+ + H +V+ YG CT R F++ EY+ NG L L +
Sbjct: 56 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQL 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+ + K + A+ YL +HRD++++N L++ + VSDFG+++++ D E
Sbjct: 114 LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----E 165
Query: 124 FAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPN 176
+ + G + PE+ K ++K D+++FGVL E+ GK P + +N ++
Sbjct: 166 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH- 224
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ + L P L+ + KV +IM + C + RP + +
Sbjct: 225 --IAQGLRLYRPHLASE---KVYTIM---YSCWHEKADERPTFKIL 262
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 26/226 (11%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E V+ + H +V+ YG CT R F++ EY+ NG L L +
Sbjct: 45 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQL 102
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+ + K + A+ YL +HRD++++N L++ + VSDFG+++++ D E
Sbjct: 103 LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----E 154
Query: 124 FAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPN 176
+ + G + PE+ K ++K D+++FGVL E+ GK P + +N ++
Sbjct: 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH- 213
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ + L P L+ + KV +IM + C + RP + +
Sbjct: 214 --IAQGLRLYRPHLASE---KVYTIM---YSCWHEKADERPTFKIL 251
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 26/226 (11%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E V+ + H +V+ YG CT R F++ EY+ NG L L +
Sbjct: 50 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQL 107
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+ + K + A+ YL +HRD++++N L++ + VSDFG+++++ D E
Sbjct: 108 LEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----E 159
Query: 124 FAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPN 176
+ + G + PE+ K ++K D+++FGVL E+ GK P + +N ++
Sbjct: 160 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH- 218
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ + L P L+ + KV +IM + C + RP + +
Sbjct: 219 --IAQGLRLYRPHLASE---KVYTIM---YSCWHEKADERPTFKIL 256
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 108/226 (47%), Gaps = 26/226 (11%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E V+ + H +V+ YG CT R F++ EY+ NG L L +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQL 122
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+ + K + A+ YL +HRD++++N L++ + VSDFG+++++ D E
Sbjct: 123 LEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-----E 174
Query: 124 FAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPN 176
+ + G + PE+ K ++K D+++FGVL E+ GK P + +N ++
Sbjct: 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH- 233
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ + L P L+ + KV +IM + C + RP + +
Sbjct: 234 --IAQGLRLYRPHLASE---KVYTIM---YSCWHEKADERPTFKIL 271
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T+
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTD 165
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 221
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 222 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T+
Sbjct: 111 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTD 165
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 221
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 222 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 111
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T+
Sbjct: 112 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTD 166
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 222
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 223 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 257
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G + L + +E R
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRT 115
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 170
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 226
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 227 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 115
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T+
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTD 170
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 226
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 227 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 26/232 (11%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT---SAEEL 58
+++F+ E V+ ++ H +V+ YG C LV+E++E+G LS L +AE L
Sbjct: 46 EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETL 105
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD- 117
+ + + ++YL ++HRD++++N L+ VSDFG+ +F+ D
Sbjct: 106 -----LGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 157
Query: 118 --SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSSN 174
SS T+F + +PE+ + ++K DV+SFGVL EV +GK P + SN
Sbjct: 158 YTSSTGTKFP--VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
Query: 175 PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ PRL V ++ C PE RP + + L
Sbjct: 216 DISTGFRLYKPRLASTHV---------YQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E V+ + H +V+ YG CT R F++ EY+ NG L L +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQL 122
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD---SSN 120
+ + K + A+ YL +HRD++++N L++ + VSDFG+++++ D SS
Sbjct: 123 LEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSV 179
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
++F + PE+ K ++K D+++FGVL E+ GK P + +N ++ +
Sbjct: 180 GSKFPVRWS--PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---I 234
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ L P L+ + KV +IM + C + RP + +
Sbjct: 235 AQGLRLYRPHLASE---KVYTIM---YSCWHEKADERPTFKIL 271
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 136
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS T
Sbjct: 137 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 191
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+ PE+ K D++S GVL E + GK P
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS T
Sbjct: 111 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTX 165
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 221
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 222 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS T
Sbjct: 110 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 164
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 220
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 221 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 255
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EITVL++ + K+YG +++ EYL GS +L E ++ +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATI 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
++ I L YLH + +HRDI + NVLL E ++DFG+A + F G
Sbjct: 110 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 166
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK------HPRDFLSNVSSSNPNILVN 180
T ++APE+ +K D++S G+ A+E+ +G+ HP L + +NP L
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 226
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
P + E CL+ P RP + + +
Sbjct: 227 NYSKP---------------LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 8/163 (4%)
Query: 2 KKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
KKE + EI V+ E ++ NIV + ++V EYL GSL+ ++ +T +E
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDE--- 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ V + AL +LH + ++HR+I S N+LL ++ ++DFG I P+ S
Sbjct: 117 GQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 173
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT ++APE+ K D++S G++A+E+I+G+ P
Sbjct: 174 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 22/228 (9%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+E + ++H NI+ G C + LV E+ G L+ +L+ ++ +N
Sbjct: 55 QEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI----LVNW 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE--------AHVSDFGIAKFIQPDS 118
IA ++YLH + I PI+HRD+ S N+L+ + E ++DFG+A+ +
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--EWHR 168
Query: 119 SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
+ AG Y ++APE+ + DV+S+GVL E++ G+ P + ++ + +
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY-GVA 227
Query: 179 VNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+N++ P +P + K++ C + +P SRP+ I L
Sbjct: 228 MNKLALP-IPSTCPEPFAKLMED------CWNPDPHSRPSFTNILDQL 268
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EITVL++ + K+YG +++ EYL GS +L E ++ +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATI 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
++ I L YLH + +HRDI + NVLL E ++DFG+A + F G
Sbjct: 110 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 166
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK------HPRDFLSNVSSSNPNILVN 180
T ++APE+ +K D++S G+ A+E+ +G+ HP L + +NP L
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 226
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
P + E CL+ P RP + + +
Sbjct: 227 NYSKP---------------LKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 51 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 107
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS T
Sbjct: 108 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 162
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 218
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 219 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 253
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T
Sbjct: 114 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 168
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 224
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 225 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS T
Sbjct: 114 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 168
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 224
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 225 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EITVL++ + K+YG +++ EYL GS +L E ++ +
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATI 124
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
++ I L YLH + +HRDI + NVLL E ++DFG+A + F G
Sbjct: 125 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 181
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK------HPRDFLSNVSSSNPNILVN 180
T ++APE+ +K D++S G+ A+E+ +G+ HP L + +NP L
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 241
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
P + E CL+ P RP + + +
Sbjct: 242 NYSKP---------------LKEFVEACLNKEPSFRPTAKELLK 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS T
Sbjct: 111 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 165
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+ PE+ K D++S GVL E + GK P
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EITVL++ + K+YG +++ EYL GS +L E ++ +
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATI 129
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
++ I L YLH + +HRDI + NVLL E ++DFG+A + F G
Sbjct: 130 LREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 186
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK------HPRDFLSNVSSSNPNILVN 180
T ++APE+ +K D++S G+ A+E+ +G+ HP L + +NP L
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG 246
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
P + E CL+ P RP + + +
Sbjct: 247 NYSKP---------------LKEFVEACLNKEPSFRPTAKELLK 275
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 114
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS T
Sbjct: 115 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 169
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 225
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 226 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 115
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 170
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 171 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 226
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 227 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 71 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 127
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + + SS T
Sbjct: 128 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 182
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+ PE+ K D++S GVL E + GK P
Sbjct: 183 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 115
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T
Sbjct: 116 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTT 170
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE K D++S GVL E + GK P F +N + +
Sbjct: 171 LCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 226
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 227 EFTFPDFVTEGARDLISRL------LKHNPSQRPXLREVLE 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 136
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS +
Sbjct: 137 ATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDD 191
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+ PE+ K D++S GVL E + GK P
Sbjct: 192 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 111
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E ++DFG + SS T
Sbjct: 112 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTT 166
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
+GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 167 LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 222
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 223 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 257
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G + L + +E R
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRT 115
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 116 ATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXX 170
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 226
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 227 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 261
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 18/231 (7%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL E +++ + H N+V G T + +V E++ENG+L L +
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG--QFTVI 145
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD-SSN 120
+ + +++GIA + YL VHRD++++N+L++ VSDFG+++ I+ D +
Sbjct: 146 QLVGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 121 WTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+T G + APE K T+ DV+S+G++ EV+ G+ P +SN
Sbjct: 203 YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD------ 256
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
++ + + P +D + +M C RP + I +L K
Sbjct: 257 VIKAIEEGYRLPAPMDCPAGLHQLM---LDCWQKERAERPKFEQIVGILDK 304
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS +
Sbjct: 114 ATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDD 168
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 224
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 225 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 111 ATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAA 165
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 221
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 222 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 114 ATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXX 168
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 224
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 225 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 111 ATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXX 165
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 221
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 222 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H + +HRDI +N+LL E +++FG + + SS T
Sbjct: 114 ATYITELANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT 168
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 224
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 225 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 114 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAA 168
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 224
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 225 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 112
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 113 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXX 167
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 223
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 224 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 258
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 112
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E +++FG + + SS T
Sbjct: 113 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTT 167
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 168 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 223
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 224 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRT 111
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 112 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDT 166
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 167 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQETYKRISR--V 222
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 223 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ + +L+ EY G++ L + +E R
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE---QRT 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 111 ATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAA 165
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++S GVL E + GK P F +N + +
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP--FEANTYQDTYKRISR--V 221
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P + +IS + L +NP RP ++ + +
Sbjct: 222 EFTFPDFVTEGARDLISRL------LKHNPSQRPMLREVLE 256
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L +T + L + +
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGET-GKYLRLPQLV 114
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I + + WT
Sbjct: 115 DMSAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTAR 169
Query: 125 AGT---YGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVN 180
G + APE A + T K DV+SFG+L E+ KG+ P P ++
Sbjct: 170 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNR 219
Query: 181 EMLDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
E+LD R+ PP + S+ ++ C PE RP + + L
Sbjct: 220 EVLDQVERGYRMPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFL 266
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRT 114
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS T
Sbjct: 115 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTT 169
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+ PE+ K D++S GVL E + G P
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 8/163 (4%)
Query: 2 KKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++E L E+ ++ + +H N+V+ Y +++ E+L+ G+L+ I++ EE
Sbjct: 85 RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE--- 141
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ V + + AL+YLH + +HRDI S ++LL L+ +SDFG I D
Sbjct: 142 -QIATVCEAVLQALAYLHAQGV---IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 197
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT ++APE+ + D++S G++ +E++ G+ P
Sbjct: 198 RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHS--FLVYEYLENGSLSVILNNDTSAEE- 57
+K+ + E+ +L E++H NIV++Y ++ ++V EY E G L+ ++ T +
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 58 LGWSRRINVIKGIAHALSYLHH--DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115
L + V+ + AL H D ++HRD+ NV LD + + DFG+A+ +
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
D EF GT Y++PE M K D++S G L E+
Sbjct: 168 HDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHS--FLVYEYLENGSLSVILNNDTSAEE- 57
+K+ + E+ +L E++H NIV++Y ++ ++V EY E G L+ ++ T +
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 58 LGWSRRINVIKGIAHALSYLHH--DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115
L + V+ + AL H D ++HRD+ NV LD + + DFG+A+ +
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
D+S F GT Y++PE M K D++S G L E+
Sbjct: 168 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 17/224 (7%)
Query: 1 DKKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
++E L E+ ++ + H N+V Y ++V E+LE G+L+ I+ + EE
Sbjct: 84 QRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-- 141
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ V + ALSYLH+ + +HRDI S ++LL + +SDFG + +
Sbjct: 142 --QIATVCLSVLRALSYLHNQGV---IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 196
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILV 179
GT ++APE+ + + D++S G++ +E+I G+ P + P +
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP-------YFNEPPLQA 249
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAF-LCLDNNPESRPNMQTI 222
+ LPP D+ KV S++ L L P R Q +
Sbjct: 250 MRRIRDSLPPRVKDLH-KVSSVLRGFLDLMLVREPSQRATAQEL 292
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHS--FLVYEYLENGSLSVILNNDTSAEE- 57
+K+ + E+ +L E++H NIV++Y ++ ++V EY E G L+ ++ T +
Sbjct: 48 EKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 58 LGWSRRINVIKGIAHALSYLHH--DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115
L + V+ + AL H D ++HRD+ NV LD + + DFG+A+ +
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 167
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
D+S F GT Y++PE M K D++S G L E+
Sbjct: 168 HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EITVL++ I +++G + +++ EYL GS +L E + +
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEE----TYIATI 121
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
++ I L YLH + +HRDI + NVLL + + ++DFG+A + F G
Sbjct: 122 LREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVG 178
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK------HPRDFLSNVSSSNPNILVN 180
T ++APE+ K D++S G+ A+E+ KG+ HP L + ++P L
Sbjct: 179 TPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEG 238
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ P E CL+ +P RP + + +
Sbjct: 239 QHSKP---------------FKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 9/165 (5%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVI--LNNDTSAEEL 58
D +E ++EI+++ + ++VK+YG ++V EY GS+S I L N T E+
Sbjct: 67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED- 125
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
+++ L YLH +HRDI + N+LL+ E A ++DFG+A +
Sbjct: 126 ---EIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXM 179
Query: 119 SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT ++APE+ + D++S G+ A+E+ +GK P
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 26/232 (11%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEE-----L 58
E L+EI +++ H NIV +Y +LV + L GS+ I+ + + E L
Sbjct: 54 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 113
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
S +++ + L YLH + +HRD+ + N+LL + ++DFG++ F+
Sbjct: 114 DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 170
Query: 119 -----SNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGKHPRDFLSNVSS 172
F GT ++APE+ ++ K D++SFG+ A+E+ G P +
Sbjct: 171 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV 230
Query: 173 SNPNILVNEMLDPRLPPLSVDIRGKVI------SIMEVAFLCLDNNPESRPN 218
+++ DP P L ++ K + S ++ LCL +PE RP
Sbjct: 231 ----LMLTLQNDP--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVV 117
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 172
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 173 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 222
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 223 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 58 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 116
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 117 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 171
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 172 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 221
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 222 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 117
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 172
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 173 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 222
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 223 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 1 DKKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
++E L E+ ++ + +H N+V+ Y ++V E+LE G+L+ I+ + EE
Sbjct: 59 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-- 116
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ V + ALS LH + +HRDI S ++LL + +SDFG + +
Sbjct: 117 --QIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 171
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILV 179
GT ++APEL + + D++S G++ +E++ G+ P + P +
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------YFNEPPLKA 224
Query: 180 NEMLDPRLPP 189
+M+ LPP
Sbjct: 225 MKMIRDNLPP 234
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 29/240 (12%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEE-----L 58
E L+EI +++ H NIV +Y +LV + L GS+ I+ + + E L
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 118
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
S +++ + L YLH + +HRD+ + N+LL + ++DFG++ F+
Sbjct: 119 DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175
Query: 119 -----SNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGKHPRDFLSNVSS 172
F GT ++APE+ ++ K D++SFG+ A+E+ G P +
Sbjct: 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV 235
Query: 173 SNPNILVNEMLDPRLPPLSVDIRGKVI------SIMEVAFLCLDNNPESRPNMQTICQLL 226
+++ DP P L ++ K + S ++ LCL +PE RP T +LL
Sbjct: 236 ----LMLTLQNDP--PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP---TAAELL 286
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVV 112
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 113 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 167
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 168 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 217
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 218 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 112
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 113 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 167
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 168 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 217
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 218 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 35/231 (15%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 51 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 110
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ + + +N
Sbjct: 111 KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN 164
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVN 180
EF GT Y++PE + + D++S G+ +E+ G++PR P + +
Sbjct: 165 --EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR----------PPMAIF 212
Query: 181 EMLD-------PRLPPLSVDIRGKVISIMEVAFL--CLDNNPESRPNMQTI 222
E+LD P+LP V S+ F+ CL NP R +++ +
Sbjct: 213 ELLDYIVNEPPPKLP-------SAVFSLEFQDFVNKCLIKNPAERADLKQL 256
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 1 DKKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
++E L E+ ++ + +H N+V+ Y ++V E+LE G+L+ I+ + EE
Sbjct: 70 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-- 127
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ V + ALS LH + +HRDI S ++LL + +SDFG + +
Sbjct: 128 --QIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 182
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILV 179
GT ++APEL + + D++S G++ +E++ G+ P + P +
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------YFNEPPLKA 235
Query: 180 NEMLDPRLPP 189
+M+ LPP
Sbjct: 236 MKMIRDNLPP 245
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVV 112
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 113 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 167
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 168 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 217
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 218 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 1 DKKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
++E L E+ ++ + +H N+V+ Y ++V E+LE G+L+ I+ + EE
Sbjct: 68 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-- 125
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ V + ALS LH + +HRDI S ++LL + +SDFG + +
Sbjct: 126 --QIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 180
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILV 179
GT ++APEL + + D++S G++ +E++ G+ P + P +
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------YFNEPPLKA 233
Query: 180 NEMLDPRLPP 189
+M+ LPP
Sbjct: 234 MKMIRDNLPP 243
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVV 117
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 172
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 173 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 222
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 223 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 1 DKKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
++E L E+ ++ + +H N+V+ Y ++V E+LE G+L+ I+ + EE
Sbjct: 63 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-- 120
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ V + ALS LH + +HRDI S ++LL + +SDFG + +
Sbjct: 121 --QIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 175
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILV 179
GT ++APEL + + D++S G++ +E++ G+ P + P +
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------YFNEPPLKA 228
Query: 180 NEMLDPRLPP 189
+M+ LPP
Sbjct: 229 MKMIRDNLPP 238
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVV 112
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 113 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 167
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 168 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 217
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 218 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 112
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 113 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 167
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 168 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 217
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 218 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 114
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 115 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 169
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 170 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 219
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 220 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 114
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 115 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 169
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 170 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 219
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 220 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 54 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVV 112
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 113 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 167
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 168 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 217
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 218 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 117
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 172
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 173 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 222
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 223 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 46/249 (18%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAE--- 56
+K+ + E+ +++ + +H NIV G CTH ++ EY G L L A+
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 143
Query: 57 ----ELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA 111
L ++ +A +++L +CI HRD++++NVLL + A + DFG+A
Sbjct: 144 EDGRPLELRDLLHFSSQVAQGMAFLASKNCI----HRDVAARNVLLTNGHVAKIGDFGLA 199
Query: 112 KFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
+ I DS+ + ++APE + T + DV+S+G+L E+ G +P
Sbjct: 200 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---- 255
Query: 169 NVSSSNPNILVN-----------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP 217
P ILVN +M P P + + SIM+ C P RP
Sbjct: 256 ------PGILVNSKFYKLVKDGYQMAQPAFAPKN------IYSIMQA---CWALEPTHRP 300
Query: 218 NMQTICQLL 226
Q IC L
Sbjct: 301 TFQQICSFL 309
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 1 DKKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
++E L E+ ++ + +H N+V+ Y ++V E+LE G+L+ I+ + EE
Sbjct: 113 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-- 170
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ V + ALS LH + +HRDI S ++LL + +SDFG + +
Sbjct: 171 --QIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILV 179
GT ++APEL + + D++S G++ +E++ G+ P + P +
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP-------YFNEPPLKA 278
Query: 180 NEMLDPRLPP 189
+M+ LPP
Sbjct: 279 MKMIRDNLPP 288
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 125
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 126 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 180
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 181 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 230
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 231 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 277
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 59 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 117
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ T
Sbjct: 118 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--T 172
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 173 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 222
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 223 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ RE+ + + +RH NI++ YG+ A +L+ EY G++ L + +E R
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRT 114
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
I +A+ALSY H ++HRDI +N+LL E ++DFG + + SS
Sbjct: 115 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDT 169
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+ PE+ K D++S GVL E + G P
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 8/164 (4%)
Query: 1 DKKEFL-REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
++E L E+ ++ + +H N+V+ Y ++V E+LE G+L+ I+ + EE
Sbjct: 190 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-- 247
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ V + ALS LH + +HRDI S ++LL + +SDFG + +
Sbjct: 248 --QIAAVCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT ++APEL + + D++S G++ +E++ G+ P
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVV 113
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ T
Sbjct: 114 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--T 168
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 169 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 218
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 219 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 109/249 (43%), Gaps = 46/249 (18%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAE--- 56
+K+ + E+ +++ + +H NIV G CTH ++ EY G L L A+
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 57 ----ELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA 111
L ++ +A +++L +CI HRD++++NVLL + A + DFG+A
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMAFLASKNCI----HRDVAARNVLLTNGHVAKIGDFGLA 207
Query: 112 KFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
+ I DS+ + ++APE + T + DV+S+G+L E+ G +P
Sbjct: 208 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY---- 263
Query: 169 NVSSSNPNILVN-----------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRP 217
P ILVN +M P P + + SIM+ C P RP
Sbjct: 264 ------PGILVNSKFYKLVKDGYQMAQPAFAPKN------IYSIMQA---CWALEPTHRP 308
Query: 218 NMQTICQLL 226
Q IC L
Sbjct: 309 TFQQICSFL 317
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 55 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 113
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 114 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 168
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 169 APAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 218
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 219 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 63 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 120
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 121 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 177
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 178 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 232
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 233 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 56 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 114
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 115 LLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 169
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 170 APAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 219
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 220 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 118
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 119 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 175
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 230
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 231 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 56 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 113
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 114 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 170
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 171 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 225
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 226 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 265
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 21/227 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVV 110
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ T
Sbjct: 111 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--T 165
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
AG + APE LAY K + K DV++FGVL E+ G P + S
Sbjct: 166 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVYE 221
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
L+ + P G + E+ C NP RP+ I Q
Sbjct: 222 LLEKDYRMERP------EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 64 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 121
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 122 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 178
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 179 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 233
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 234 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 112
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 113 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 224
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 225 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 57 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 114
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 115 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 171
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 172 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 226
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 227 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 266
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.6 bits (187), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 16/224 (7%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H +V+ Y + ++V EY+ GSL L D L +
Sbjct: 51 FLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLK-DGEGRALKLPNLV 108
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ +A ++Y+ +HRD+ S N+L+ ++DFG+A+ I+ + +
Sbjct: 109 DMAAQVAAGMAYIERMNY---IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG 165
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E++ KG+ P ++N M
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM 225
Query: 183 LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
P+ P IS+ E+ C +PE RP + + L
Sbjct: 226 PCPQDCP---------ISLHELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 40/236 (16%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L +T + L + +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLV 283
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + E+
Sbjct: 284 DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-----EY 335
Query: 125 AGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNI 177
G + APE A + T K DV+SFG+L E+ KG+ P P +
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGM 385
Query: 178 LVNEMLDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ E+LD R+ PP + S+ ++ C PE RP + + L
Sbjct: 386 VNREVLDQVERGYRMPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L +T + L + +
Sbjct: 53 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLV 110
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 111 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 167
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 168 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 217
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C PE RP + + L
Sbjct: 218 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFL 262
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 60/258 (23%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEY----------------LENG 43
+K+ + E+ +++ + +H NIV G CTH ++ EY LE
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 44 SLSVILNNDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYE 102
I N+ S +L ++ +A +++L +CI HRD++++NVLL +
Sbjct: 152 PAFAIANSTASTRDL-----LHFSSQVAQGMAFLASKNCI----HRDVAARNVLLTNGHV 202
Query: 103 AHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159
A + DFG+A+ I DS+ + ++APE + T + DV+S+G+L E+
Sbjct: 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
Query: 160 GKHPRDFLSNVSSSNPNILVN-----------EMLDPRLPPLSVDIRGKVISIMEVAFLC 208
G +P P ILVN +M P P + + SIM+ C
Sbjct: 263 GLNPY----------PGILVNSKFYKLVKDGYQMAQPAFAPKN------IYSIMQA---C 303
Query: 209 LDNNPESRPNMQTICQLL 226
P RP Q IC L
Sbjct: 304 WALEPTHRPTFQQICSFL 321
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 112
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 113 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREG 169
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 224
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 225 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 21/227 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVV 110
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ T
Sbjct: 111 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--T 165
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
AG + APE LAY K + K DV++FGVL E+ G P + S
Sbjct: 166 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVYE 221
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
L+ + P G + E+ C NP RP+ I Q
Sbjct: 222 LLEKDYRMERP------EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 40/236 (16%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L +T + L + +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLV 283
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + E+
Sbjct: 284 DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-----EY 335
Query: 125 AGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNI 177
G + APE A + T K DV+SFG+L E+ KG+ P P +
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGM 385
Query: 178 LVNEMLDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ E+LD R+ PP + S+ ++ C PE RP + + L
Sbjct: 386 VNREVLDQVERGYRMPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 35/237 (14%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K +FL+E +L + H NIV+ G CT + ++V E ++ G L T L
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVK 213
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ ++ A + YL C +HRD++++N L+ + +SDFG+++
Sbjct: 214 TLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR--------- 261
Query: 122 TEFAGTYG-----------YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSN 169
E G Y + APE + +++ DV+SFG+L E G P LSN
Sbjct: 262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN 321
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ + P L P V +ME C P RP+ TI Q L
Sbjct: 322 QQTREFVEKGGRLPCPELCP------DAVFRLMEQ---CWAYEPGQRPSFSTIYQEL 369
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 40/236 (16%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L +T + L + +
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLV 366
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + E+
Sbjct: 367 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDN-----EY 418
Query: 125 AGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNI 177
G + APE A + T K DV+SFG+L E+ KG+ P P +
Sbjct: 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGM 468
Query: 178 LVNEMLDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ E+LD R+ PP + S+ ++ C PE RP + + L
Sbjct: 469 VNREVLDQVERGYRMPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFL 518
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 25/231 (10%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ + +N
Sbjct: 108 KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 161
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVN 180
F GT Y++PE + + D++S G+ +E+ G++P S P + +
Sbjct: 162 --SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF 219
Query: 181 EMLD-------PRLPPLSVDIRGKVISIMEVAFL--CLDNNPESRPNMQTI 222
E+LD P+LP V S+ F+ CL NP R +++ +
Sbjct: 220 ELLDYIVNEPPPKLP-------SGVFSLEFQDFVNKCLIKNPAERADLKQL 263
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 21/228 (9%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTSAEELGW 60
F RE + H IV Y + ++V EY++ +L I++ + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
R I VI AL++ H + I +HRD+ N+++ V DFGIA+ I ++
Sbjct: 116 KRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 121 WTEFA---GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNI 177
T+ A GT Y++PE A V A+ DVYS G + EV+ G+ P S VS + ++
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225
DP +PP S G + V L NPE+R QT ++
Sbjct: 233 ----REDP-IPP-SARHEGLSADLDAVVLKALAKNPENR--YQTAAEM 272
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 52 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVV 110
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 111 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FT 165
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
AG + APE LAY K + K DV++FGVL E+ G P + S
Sbjct: 166 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP---YPGIDPSQVYE 221
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
L+ + P G + E+ C NP RP+ I Q
Sbjct: 222 LLEKDYRMERP------EGCPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 50 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 107
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 108 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 164
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 165 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 219
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 220 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 259
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 109/236 (46%), Gaps = 40/236 (16%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L +T + L + +
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGET-GKYLRLPQLV 283
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + E+
Sbjct: 284 DMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-----EY 335
Query: 125 AGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNI 177
G + APE A + T K DV+SFG+L E+ KG+ P P +
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGM 385
Query: 178 LVNEMLDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ E+LD R+ PP + S+ ++ C PE RP + + L
Sbjct: 386 VNREVLDQVERGYRMPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 60 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 118 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 175 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 229
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 230 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 269
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 61 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 118
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 119 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 175
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 230
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 231 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 270
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 112
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 113 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 224
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 225 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 65 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 122
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 123 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 179
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 180 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 234
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 235 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 274
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 109/233 (46%), Gaps = 34/233 (14%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L +T + L + +
Sbjct: 57 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGET-GKYLRLPQLV 114
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I + + +T
Sbjct: 115 DMSAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTAR 169
Query: 125 AGT---YGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVN 180
G + APE A + T K DV+SFG+L E+ KG+ P P ++
Sbjct: 170 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNR 219
Query: 181 EMLDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
E+LD R+ PP + S+ ++ C PE RP + + L
Sbjct: 220 EVLDQVERGYRMPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFL 266
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ +IRH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 60 FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLV 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 118 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 224
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 225 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTSAEELGW 60
F RE + H IV Y + ++V EY++ +L I++ + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
R I VI AL++ H + I +HRD+ N+++ V DFGIA+ I ++
Sbjct: 116 KRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 121 WTEFA---GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNI 177
T+ A GT Y++PE A V A+ DVYS G + EV+ G+ P F + S
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP--FTGDSPDSVAYQ 230
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225
V E DP +PP S G + V L NPE+R QT ++
Sbjct: 231 HVRE--DP-IPP-SARHEGLSADLDAVVLKALAKNPENR--YQTAAEM 272
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 55 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 112
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ E
Sbjct: 113 DMAAQIAEGMAFIEERNY---IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREG 169
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 224
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 225 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 264
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 60/258 (23%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEY----------------LENG 43
+K+ + E+ +++ + +H NIV G CTH ++ EY LE
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD 151
Query: 44 SLSVILNNDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYE 102
I N+ S +L ++ +A +++L +CI HRD++++NVLL +
Sbjct: 152 PAFAIANSTLSTRDL-----LHFSSQVAQGMAFLASKNCI----HRDVAARNVLLTNGHV 202
Query: 103 AHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK- 159
A + DFG+A+ I DS+ + ++APE + T + DV+S+G+L E+
Sbjct: 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262
Query: 160 GKHPRDFLSNVSSSNPNILVN-----------EMLDPRLPPLSVDIRGKVISIMEVAFLC 208
G +P P ILVN +M P P + + SIM+ C
Sbjct: 263 GLNPY----------PGILVNSKFYKLVKDGYQMAQPAFAPKN------IYSIMQA---C 303
Query: 209 LDNNPESRPNMQTICQLL 226
P RP Q IC L
Sbjct: 304 WALEPTHRPTFQQICSFL 321
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 21/228 (9%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTSAEELGW 60
F RE + H IV Y + ++V EY++ +L I++ + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
R I VI AL++ H + I +HRD+ N+++ V DFGIA+ I ++
Sbjct: 116 KRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 121 WTEFA---GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNI 177
T+ A GT Y++PE A V A+ DVYS G + EV+ G+ P S VS + ++
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225
DP +PP S G + V L NPE+R QT ++
Sbjct: 233 ----REDP-IPP-SARHEGLSADLDAVVLKALAKNPENR--YQTAAEM 272
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 109/231 (47%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLV 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+++ N+L+ V+DFG+A+ I+ + +
Sbjct: 118 DMAAQIASGMAYVERMNY---VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 224
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 225 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 21/228 (9%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTSAEELGW 60
F RE + H IV Y + ++V EY++ +L I++ + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
R I VI AL++ H + I +HRD+ N+++ V DFGIA+ I ++
Sbjct: 116 KRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 121 WTEFA---GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNI 177
T+ A GT Y++PE A V A+ DVYS G + EV+ G+ P S VS + ++
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225
DP +PP S G + V L NPE+R QT ++
Sbjct: 233 ----REDP-IPP-SARHEGLSADLDAVVLKALAKNPENR--YQTAAEM 272
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + +V EY+ GSL L +T + L + +
Sbjct: 50 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGET-GKYLRLPQLV 107
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 108 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 164
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 165 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 214
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C PE RP + + L
Sbjct: 215 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKEPEERPTFEYLQAFL 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLV 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 118 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 224
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 225 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 52/255 (20%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND------- 52
+K+ + E+ +++ + +H NIV G CTH ++ EY G L L
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 53 ------TSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
E+L ++ +A +++L +CI HRD++++NVLL + A +
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCI----HRDVAARNVLLTNGHVAKI 207
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKH 162
DFG+A+ I DS+ + ++APE + T + DV+S+G+L E+ G +
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 267
Query: 163 PRDFLSNVSSSNPNILVN-----------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDN 211
P P ILVN +M P P + + SIM+ C
Sbjct: 268 PY----------PGILVNSKFYKLVKDGYQMAQPAFAPKN------IYSIMQA---CWAL 308
Query: 212 NPESRPNMQTICQLL 226
P RP Q IC L
Sbjct: 309 EPTHRPTFQQICSFL 323
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 29/231 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 358
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HR+++++N L+ + V+DFG+++ + D+ +T
Sbjct: 359 LLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 413
Query: 123 EFAGTY---GYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
AG + APE LAY K + K DV++FGVL E+ + S P I
Sbjct: 414 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIA---------TYGMSPYPGID 463
Query: 179 VNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 464 LSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 510
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 31/232 (13%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 261 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVV 319
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HR+++++N L+ + V+DFG+++ + D+ +T
Sbjct: 320 LLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 374
Query: 123 EFAGTY---GYVAPE-LAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
AG + APE LAY K + K DV++FGVL E+ G P P I
Sbjct: 375 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPY----------PGI 423
Query: 178 LVNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 424 DLSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 51 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLV 108
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 109 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 165
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 215
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 216 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 260
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN-- 65
E +L+ + H I++ +G A+ F++ +Y+E G L +L S+R
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---------SQRFPNP 106
Query: 66 VIKGIAH----ALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
V K A AL YLH I++RD+ +N+LLD ++DFG AK++ PD +
Sbjct: 107 VAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT-- 160
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNE 181
GT Y+APE+ T D +SFG+L E++ G P + SN + IL E
Sbjct: 161 YXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSNTMKTYEKILNAE 219
Query: 182 MLDPRLPPL 190
+ R PP
Sbjct: 220 L---RFPPF 225
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 23/231 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K +FL+E +L + H NIV+ G CT + ++V E ++ G L T L
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR--TEGARLRVK 213
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ ++ A + YL C +HRD++++N L+ + +SDFG+++ ++
Sbjct: 214 TLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGV 267
Query: 122 TEFAGTY-----GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNP 175
+G + APE + +++ DV+SFG+L E G P LSN +
Sbjct: 268 XAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ P L P V +ME C P RP+ TI Q L
Sbjct: 328 VEKGGRLPCPELCP------DAVFRLMEQ---CWAYEPGQRPSFSTIYQEL 369
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 31/231 (13%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 67 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 126
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ + +N
Sbjct: 127 KVSIAVIKG----LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 180
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVN 180
F GT Y++PE + + D++S G+ +E+ G++P + S + ++ +
Sbjct: 181 --SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP------IGSGSGSMAIF 232
Query: 181 EMLD-------PRLPPLSVDIRGKVISIMEVAFL--CLDNNPESRPNMQTI 222
E+LD P+LP V S+ F+ CL NP R +++ +
Sbjct: 233 ELLDYIVNEPPPKLPS-------GVFSLEFQDFVNKCLIKNPAERADLKQL 276
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 113/232 (48%), Gaps = 31/232 (13%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT +++ E++ G+L L + + +E+
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVV 316
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HR+++++N L+ + V+DFG+++ + D+ +T
Sbjct: 317 LLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YT 371
Query: 123 EFAGTY---GYVAPE-LAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
AG + APE LAY K + K DV++FGVL E+ G P P I
Sbjct: 372 AHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSPY----------PGI 420
Query: 178 LVNEMLDPRLPPLSVDIR-----GKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++++ + L D R G + E+ C NP RP+ I Q
Sbjct: 421 DLSQVYE----LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 468
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 21/228 (9%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTSAEELGW 60
F RE + H IV Y + ++V EY++ +L I++ + +
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 132
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
R I VI AL++ H + I +HRD+ N+++ V DFGIA+ I ++
Sbjct: 133 KRAIEVIADACQALNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
Query: 121 WTEFA---GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNI 177
T+ A GT Y++PE A V A+ DVYS G + EV+ G+ P S VS + ++
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 249
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225
DP +PP S G + V L NPE+R QT ++
Sbjct: 250 ----REDP-IPP-SARHEGLSADLDAVVLKALAKNPENR--YQTAAEM 289
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLV 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 118 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 224
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 225 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLV 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 118 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 224
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 225 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 49 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLV 106
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 107 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 163
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 164 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 213
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 214 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 258
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 108/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEM-GKYLRLPQLV 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 118 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 224
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 225 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 112 NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 169 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 88/159 (55%), Gaps = 11/159 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+EFL+E V+ EI+H N+V+ G CT ++V EY+ G+L L + + EE+
Sbjct: 73 EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVV 131
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + I+ A+ YL +HRD++++N L+ + V+DFG+++ + D+ +T
Sbjct: 132 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YT 186
Query: 123 EFAGT---YGYVAPE-LAYTMKVTAKCDVYSFGVLALEV 157
AG + APE LAY + K DV++FGVL E+
Sbjct: 187 AHAGAKFPIKWTAPESLAYN-TFSIKSDVWAFGVLLWEI 224
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 107/229 (46%), Gaps = 26/229 (11%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E ++ +++H+ +V+ Y T +++ EY+ENGSL L S +L ++ +
Sbjct: 51 FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKT-PSGIKLTINKLL 108
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++++ +HR++ + N+L+ ++DFG+A+ I+ + E
Sbjct: 109 DMAAQIAEGMAFIEERNY---IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 165
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN-- 180
A + APE T K DV+SFG+L E++ G+ P + +NP ++ N
Sbjct: 166 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM-----TNPEVIQNLE 220
Query: 181 ---EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
M+ P P + ++ LC PE RP + +L
Sbjct: 221 RGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRPTFDYLRSVL 260
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTSAEELGW 60
F RE + H IV Y + ++V EY++ +L I++ + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTP 115
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
R I VI AL++ H + I +HRD+ N+L+ V DFGIA+ I ++
Sbjct: 116 KRAIEVIADACQALNFSHQNGI---IHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
Query: 121 WTEFA---GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNI 177
+ A GT Y++PE A V A+ DVYS G + EV+ G+ P S VS + ++
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV 232
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQL 225
DP +PP S G + V L NPE+R QT ++
Sbjct: 233 ----REDP-IPP-SARHEGLSADLDAVVLKALAKNPENR--YQTAAEM 272
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 15/226 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ FL E ++ ++H +V+ Y T +++ EY+ GSL L +D + L +
Sbjct: 53 QAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPK 111
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
I+ IA ++Y+ +HRD+ + NVL+ ++DFG+A+ I+ +
Sbjct: 112 LIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 168
Query: 123 EFAG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN 180
E A + APE T K DV+SFG+L E++ GK P +N +++
Sbjct: 169 EGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYP-----GRTNADVMTA 223
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
R+P + + ++ IM+ +C E RP + +L
Sbjct: 224 LSQGYRMPRVE-NCPDELYDIMK---MCWKEKAEERPTFDYLQSVL 265
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 16/224 (7%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E V+ ++H +VK + T +++ E++ GSL L +D +++ + I
Sbjct: 57 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLI 114
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 115 DFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 171
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEM 182
A + APE T K DV+SFG+L +E++ G+ P + SNP ++
Sbjct: 172 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-----SNPEVIRALE 226
Query: 183 LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
R+ P + ++ +IM C N PE RP + I +L
Sbjct: 227 RGYRM-PRPENCPEELYNIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 117
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 118 NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 175 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 128 NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 185 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 128 NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 185 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 112 NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 169 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 107
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 108 NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 165 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 105
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 106 NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 163 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 125
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 126 NIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 183 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 40/236 (16%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ GSL L + + L + +
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLV 284
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+ + I+ + E+
Sbjct: 285 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLGRLIEDN-----EY 336
Query: 125 AGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNI 177
G + APE A + T K DV+SFG+L E+ KG+ P P +
Sbjct: 337 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGM 386
Query: 178 LVNEMLDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ E+LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 387 VNREVLDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 436
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L AE +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ--AHAERIDH 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 117 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 233
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 234 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ G L L + + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEM-GKYLRLPQLV 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 118 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 224
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 225 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 108/235 (45%), Gaps = 35/235 (14%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
+++E RE+ VL ++H NIV++ R SF ENGSL ++++ +
Sbjct: 66 EREESRREVAVLANMKHPNIVQY-------RESFE-----ENGSLYIVMDYCEGGDLF-- 111
Query: 61 SRRINVIKGIA----HALSYLHHDCIP-------PIVHRDISSKNVLLDLEYEAHVSDFG 109
+RIN KG+ L + C+ I+HRDI S+N+ L + + DFG
Sbjct: 112 -KRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFG 170
Query: 110 IAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
IA+ + GT Y++PE+ K D+++ G + E+ KH +
Sbjct: 171 IARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE---- 226
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ S N LV +++ PP+S+ + S++ F NP RP++ +I +
Sbjct: 227 -AGSMKN-LVLKIISGSFPPVSLHYSYDLRSLVSQLF---KRNPRDRPSVNSILE 276
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 16/224 (7%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E V+ ++H +VK + T +++ E++ GSL L +D +++ + I
Sbjct: 230 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLI 287
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ IA ++++ +HRD+ + N+L+ ++DFG+A+ I+ + E
Sbjct: 288 DFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEM 182
A + APE T K DV+SFG+L +E++ G+ P + SNP ++
Sbjct: 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-----SNPEVIRALE 399
Query: 183 LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
R+ P + ++ +IM C N PE RP + I +L
Sbjct: 400 RGYRM-PRPENCPEELYNIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 469
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 470 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 527 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
K F RE+ +++ H+NIV +LV EY+E +LS + S L
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE---SHGPLSVDT 112
Query: 63 RIN----VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
IN ++ GI HA HD IVHRDI +N+L+D + DFGIAK + S
Sbjct: 113 AINFTNQILDGIKHA-----HDM--RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165
Query: 119 SNWTEFA-GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNI 177
T GT Y +PE A D+YS G++ E++ G+ P + + VS I
Sbjct: 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-----I 220
Query: 178 LVNEMLDPRLPPLSVDIRGKV 198
+ + D +P ++ D+R +
Sbjct: 221 AIKHIQDS-VPNVTTDVRKDI 240
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 30/231 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL+E V+ ++RH +V+ Y + ++V EY+ G L L + + L + +
Sbjct: 60 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEM-GKYLRLPQLV 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ IA ++Y+ VHRD+ + N+L+ V+DFG+A+ I+ + +
Sbjct: 118 DMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 174
Query: 125 AG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEV-IKGKHPRDFLSNVSSSNPNILVNEM 182
A + APE A + T K DV+SFG+L E+ KG+ P P ++ E+
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP----------YPGMVNREV 224
Query: 183 LDP-----RL--PPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
LD R+ PP + S+ ++ C +PE RP + + L
Sbjct: 225 LDQVERGYRMPCPPECPE------SLHDLMCQCWRKDPEERPTFEYLQAFL 269
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ REI + + +RH NI++ Y + + +L+ E+ G L L +E R
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRS 117
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
++ +A AL Y H ++HRDI +N+L+ + E ++DFG + + S
Sbjct: 118 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRX 172
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++ GVL E + G P D S+ + +VN +
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH--RRIVN--V 228
Query: 184 DPRLPPLSVDIRGKVIS 200
D + PP D +IS
Sbjct: 229 DLKFPPFLSDGSKDLIS 245
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K E L E V+ ++ + IV+ G C A LV E E G L+ L + ++
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 470
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ ++ + YL VHRD++++NVLL ++ A +SDFG++K ++ D + +
Sbjct: 471 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 122 TEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
A T+G + APE K ++K DV+SFGVL E G+ P
Sbjct: 528 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTSAEELGWS 61
+ FL E +V+T++RH N+V+ G + ++V EY+ GSL L + + LG
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGD 102
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + A+ YL + VHRD++++NVL+ + A VSDFG+ K ++
Sbjct: 103 CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASS 154
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
T+ G + APE K + K DV+SFG+L E+
Sbjct: 155 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ REI + + +RH NI++ Y + + +L+ E+ G L L +E R
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRS 116
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
++ +A AL Y H ++HRDI +N+L+ + E ++DFG + + S
Sbjct: 117 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRX 171
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++ GVL E + G P D S+ + +VN +
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH--RRIVN--V 227
Query: 184 DPRLPPLSVDIRGKVIS 200
D + PP D +IS
Sbjct: 228 DLKFPPFLSDGSKDLIS 244
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ REI + + +RH NI++ Y + + +L+ E+ G L L +E R
Sbjct: 60 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRS 116
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
++ +A AL Y H ++HRDI +N+L+ + E ++DFG + + S
Sbjct: 117 ATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRX 171
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++ GVL E + G P D S+ + +VN +
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH--RRIVN--V 227
Query: 184 DPRLPPLSVDIRGKVIS 200
D + PP D +IS
Sbjct: 228 DLKFPPFLSDGSKDLIS 244
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 41/239 (17%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++++ EI +L H IVK G H +++ E+ G++ +++L D E
Sbjct: 53 EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE---- 108
Query: 62 RRINVI-KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA----KFIQP 116
+I V+ + + AL++LH I +HRD+ + NVL+ LE + ++DFG++ K +Q
Sbjct: 109 PQIQVVCRQMLEALNFLHSKRI---IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 165
Query: 117 DSSNWTEFAGTYGYVAPELAY--TMKVTA---KCDVYSFGVLALEV--IKGKH----PRD 165
S F GT ++APE+ TMK T K D++S G+ +E+ I+ H P
Sbjct: 166 RDS----FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 221
Query: 166 FLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
L ++ S+P L L P SV+ R + + LD NPE+RP+ + +
Sbjct: 222 VLLKIAKSDPPTL----LTPS--KWSVEFR-------DFLKIALDKNPETRPSAAQLLE 267
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTSAEELGWS 61
+ FL E +V+T++RH N+V+ G + ++V EY+ GSL L + + LG
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGD 117
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + A+ YL + VHRD++++NVL+ + A VSDFG+ K ++
Sbjct: 118 CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASS 169
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
T+ G + APE K + K DV+SFG+L E+
Sbjct: 170 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 19/227 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T A +V ++ E SL L+ + E+ +
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEM--KK 121
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 122 LIDIARQTARGMDYLHAKSI---IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178
Query: 121 WTEFAGTYGYVAPE---LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNP-- 175
+ + +G+ ++APE + + + + DVY+FG++ E++ G+ P SN+++ +
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQII 235
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
++ L P L + + ++ +M CL + RP+ I
Sbjct: 236 EMVGRGSLSPDLSKVRSNCPKRMKRLMAE---CLKKKRDERPSFPRI 279
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 19/227 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 65 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHASETKFEM--KK 121
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 122 LIDIARQTARGMDYLHAKSI---IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178
Query: 121 WTEFAGTYGYVAPE---LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNP-- 175
+ + +G+ ++APE + + + + DVY+FG++ E++ G+ P SN+++ +
Sbjct: 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQII 235
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
++ L P L + + ++ +M CL + RP+ I
Sbjct: 236 EMVGRGSLSPDLSKVRSNCPKRMKRLMAE---CLKKKRDERPSFPRI 279
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 118/239 (49%), Gaps = 41/239 (17%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++++ EI +L H IVK G H +++ E+ G++ +++L D E
Sbjct: 61 EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE---- 116
Query: 62 RRINVI-KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA----KFIQP 116
+I V+ + + AL++LH I +HRD+ + NVL+ LE + ++DFG++ K +Q
Sbjct: 117 PQIQVVCRQMLEALNFLHSKRI---IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173
Query: 117 DSSNWTEFAGTYGYVAPELAY--TMKVTA---KCDVYSFGVLALEV--IKGKH----PRD 165
S F GT ++APE+ TMK T K D++S G+ +E+ I+ H P
Sbjct: 174 RDS----FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 229
Query: 166 FLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
L ++ S+P L L P SV+ R + + LD NPE+RP+ + +
Sbjct: 230 VLLKIAKSDPPTL----LTPS--KWSVEFR-------DFLKIALDKNPETRPSAAQLLE 275
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 19/227 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 53 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHASETKFEM--KK 109
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 110 LIDIARQTARGMDYLHAKSI---IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ 166
Query: 121 WTEFAGTYGYVAPE---LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNP-- 175
+ + +G+ ++APE + + + + DVY+FG++ E++ G+ P SN+++ +
Sbjct: 167 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQII 223
Query: 176 NILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
++ L P L + + ++ +M CL + RP+ I
Sbjct: 224 EMVGRGSLSPDLSKVRSNCPKRMKRLMAE---CLKKKRDERPSFPRI 267
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 12/158 (7%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTSAEELGWS 61
+ FL E +V+T++RH N+V+ G + ++V EY+ GSL L + + LG
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGD 289
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + A+ YL + VHRD++++NVL+ + A VSDFG+ K ++
Sbjct: 290 CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASS 341
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
T+ G + APE K + K DV+SFG+L E+
Sbjct: 342 TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 113
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 114 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF 170
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ + APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 230
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 231 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 59/262 (22%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSA---- 55
+K+ + E+ +++ + +H NIV G CTH ++ EY G L L A
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 56 ----------------EELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLD 98
L ++ +A +++L +CI HRD++++NVLL
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI----HRDVAARNVLLT 192
Query: 99 LEYEAHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALE 156
+ A + DFG+A+ I DS+ + ++APE + T + DV+S+G+L E
Sbjct: 193 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWE 252
Query: 157 VIK-GKHPRDFLSNVSSSNPNILVN-----------EMLDPRLPPLSVDIRGKVISIMEV 204
+ G +P P ILVN +M P P + + SIM+
Sbjct: 253 IFSLGLNPY----------PGILVNSKFYKLVKDGYQMAQPAFAPKN------IYSIMQA 296
Query: 205 AFLCLDNNPESRPNMQTICQLL 226
C P RP Q IC L
Sbjct: 297 ---CWALEPTHRPTFQQICSFL 315
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 55 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 112
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 113 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 169
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 170 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 229
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 230 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 282
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 113
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 114 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 170
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 171 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 230
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 231 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 60 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 117
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 118 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 175 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 234
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 235 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 287
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 131
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 132 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 189 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 248
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 249 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 301
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 62 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 119
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 120 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 176
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 177 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 236
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 237 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 117 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 233
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 234 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 54 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 111
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 112 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 168
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 169 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 228
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 229 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 281
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 74 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 131
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 132 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 189 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 248
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 249 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 301
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 61 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 118
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 119 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 176 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 235
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 236 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 288
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 113
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 114 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 170
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 171 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 230
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 231 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 283
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 63 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 120
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 121 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 177
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 178 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 237
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 238 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 290
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 87 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 144
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 145 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 201
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 202 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 261
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 262 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 314
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 12/158 (7%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTSAEELGWS 61
+ FL E +V+T++RH N+V+ G + ++V EY+ GSL L + + LG
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGD 108
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + A+ YL + VHRD++++NVL+ + A VSDFG+ K ++
Sbjct: 109 CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASS 160
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
T+ G + APE + K DV+SFG+L E+
Sbjct: 161 TQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFY----GFCTHARHSF--LVYEYLENGSLSVILNNDTS 54
+++ + EI ++ ++ H N+V G A + L EY E G L LN +
Sbjct: 56 NRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN 115
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIA 111
L ++ I+ AL YLH + I+HRD+ +N++L + + D G A
Sbjct: 116 CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 172
Query: 112 KFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
K + TEF GT Y+APEL K T D +SFG LA E I G P FL N
Sbjct: 173 KELD-QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP--FLPN 227
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFY----GFCTHARHSF--LVYEYLENGSLSVILNNDTS 54
+++ + EI ++ ++ H N+V G A + L EY E G L LN +
Sbjct: 55 NRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN 114
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIA 111
L ++ I+ AL YLH + I+HRD+ +N++L + + D G A
Sbjct: 115 CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171
Query: 112 KFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
K + TEF GT Y+APEL K T D +SFG LA E I G P FL N
Sbjct: 172 KELD-QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP--FLPN 226
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 107/232 (46%), Gaps = 22/232 (9%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSF--LVYEYLENGSLSVILNNDTSAEELGWSRRI 64
+EI +L + H NIVK+ G CT + L+ E+L +GSL L + + ++ +++
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN--KINLKQQL 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT-- 122
I + YL VHRD++++NVL++ E++ + DFG+ K I+ D T
Sbjct: 118 KYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 174
Query: 123 -EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKHPRD-FLSNVSSSNPN 176
+ + APE K DV+SFGV E++ P FL + ++
Sbjct: 175 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQ 234
Query: 177 I----LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
+ LVN + + + P + +V +M C + P +R + Q + +
Sbjct: 235 MTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRK---CWEFQPSNRTSFQNLIE 283
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ EYL GSL L E +
Sbjct: 57 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK--HKERIDH 114
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HR+++++N+L++ E + DFG+ K + D
Sbjct: 115 IKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEY 171
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ + APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 172 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 231
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 232 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 284
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 15/226 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ FL E ++ ++H +V+ Y T +++ E++ GSL L +D + L +
Sbjct: 52 QAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPK 110
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
I+ IA ++Y+ +HRD+ + NVL+ ++DFG+A+ I+ +
Sbjct: 111 LIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 167
Query: 123 EFAG-TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN 180
E A + APE T K +V+SFG+L E++ GK P +N +++
Sbjct: 168 EGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYP-----GRTNADVMSA 222
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
R+P + + ++ IM+ +C E RP + +L
Sbjct: 223 LSQGYRMPRME-NCPDELYDIMK---MCWKEKAEERPTFDYLQSVL 264
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSF--LVYEYLENGSLSVILNNDTSAEELGWSRRI 64
+EI +L + H NIVK+ G CT + L+ E+L +GSL L + + ++ +++
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN--KINLKQQL 129
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT-- 122
I + YL VHRD++++NVL++ E++ + DFG+ K I+ D T
Sbjct: 130 KYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVK 186
Query: 123 -EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE K DV+SFGV E++
Sbjct: 187 DDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 24/223 (10%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
FL E V+ ++H +VK + T +++ E++ GSL L +D +++ + I
Sbjct: 224 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLI 281
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ IA ++++ +HRD+ + N+L+ ++DFG+A+ WT
Sbjct: 282 DFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT-- 336
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVNEML 183
APE T K DV+SFG+L +E++ G+ P + SNP ++
Sbjct: 337 -------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM-----SNPEVIRALER 384
Query: 184 DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
R+ P + ++ +IM C N PE RP + I +L
Sbjct: 385 GYRM-PRPENCPEELYNIM---MRCWKNRPEERPTFEYIQSVL 423
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
REI L RH +I+K Y + F+V EY+ G L + EE+ R +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---L 116
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I A+ Y H + VHRD+ +NVLLD A ++DFG++ + D + G
Sbjct: 117 FQQILSAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCG 172
Query: 127 TYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDP 185
+ Y APE ++ + + D++S GV+ ++ G P D D
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD------------------DE 214
Query: 186 RLPPLSVDIRGKVISIME 203
+P L IRG V I E
Sbjct: 215 HVPTLFKKIRGGVFYIPE 232
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 30/226 (13%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGS-LSVILNNDTSAEELGWSRRINV 66
EI VL + H NI+K + + ++V E E G L I++ + L +
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAH----VSDFGIAKFIQPDSSNWT 122
+K + +AL+Y H +VH+D+ +N+L + H + DFG+A+ + D + T
Sbjct: 130 MKQMMNALAYFHSQH---VVHKDLKPENILFQ-DTSPHSPIKIIDFGLAELFKSDEHS-T 184
Query: 123 EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVSSSNPN 176
AGT Y+APE+ + VT KCD++S GV+ ++ G P + + PN
Sbjct: 185 NAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPN 243
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
V P L P +VD+ ++++ +PE RP+ +
Sbjct: 244 YAVE--CRP-LTPQAVDLLKQMLT----------KDPERRPSAAQV 276
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 105
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 106 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F REI +L ++H NIVK+ G C A R+ L+ E+L GSL L E +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK--HKERIDH 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ + I + YL +HRD++++N+L++ E + DFG+ K + D
Sbjct: 117 IKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 121 WT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI----KGKH-PRDFLSNVSS 172
+ APE K + DV+SFGV+ E+ K K P +F+ + +
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGN 233
Query: 173 SNPNILVN----EML--DPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
++ E+L + RLP G I + C +NN RP+ + +
Sbjct: 234 DKQGQMIVFHLIELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLA 286
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L EE+
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG 117
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I V++G+A+ L H I+HRD+ N+L++ E + DFG++ + +N
Sbjct: 118 KVSIAVLRGLAY-LREKHQ-----IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 171
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT Y+APE + + D++S G+ +E+ G++P
Sbjct: 172 --SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T A +V ++ E SL L+ + E+ +
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEM--IK 105
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 106 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 110
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 111 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 51 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 107
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 108 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 164
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 165 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 216
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 49 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 105
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 106 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 162
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 214
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 24/235 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E +++++ H+NIV+ G + F++ E + G L L +
Sbjct: 77 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 194 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 247
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
S SN +L R+ P + G V IM C + PE RPN I +
Sbjct: 248 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAIILE 298
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 24/233 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E +++++ H+NIV+ G + F++ E + G L L +
Sbjct: 91 DELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 208 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 261
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
S SN +L R+ P + G V IM C + PE RPN I
Sbjct: 262 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAII 310
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 54 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 110
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 111 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 168 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 219
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 76 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 132
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 133 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 189
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 190 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 241
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 69 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 125
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 126 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 182
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 183 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 234
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 133
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 134 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 190
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + + +V ++ E SL L+ + E+ +
Sbjct: 77 QAFKNEVGVLRKTRHVNILLFMGYSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IK 133
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + + DFG+A K S
Sbjct: 134 LIDIARQTAQGMDYLHAKSI---IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQ 190
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ + +G+ ++APE+ + + DVY+FG++ E++ G+ P ++N
Sbjct: 191 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN 242
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+E EI++L + H NI+K + ++ +LV E+ E G L + N +E +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA- 149
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE---YEAHVSDFGIAKFIQPDSS 119
N++K I + YLH IVHRDI +N+LL+ + + DFG++ F D
Sbjct: 150 --NIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK 204
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT Y+APE+ K KCDV+S GV+ ++ G P
Sbjct: 205 -LRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 68 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 127
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 128 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 184
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 185 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 238
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
S SN +L R+ P + G V IM C + PE RPN I
Sbjct: 239 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAII 287
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 135
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 136 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 193 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 246
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
S SN +L R+ P + G V IM C + PE RPN I
Sbjct: 247 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAII 295
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 76 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 135
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 136 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 192
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 193 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 246
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
S SN +L R+ P + G V IM C + PE RPN I
Sbjct: 247 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAII 295
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 108/247 (43%), Gaps = 43/247 (17%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHS-------------FLVYEYLENGSLSVILNND 52
L E+ +L + H+ +V++Y R+ F+ EY ENG+L +++++
Sbjct: 50 LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE 109
Query: 53 TSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112
++ R+ + I ALSY+H I +HRD+ N+ +D + DFG+AK
Sbjct: 110 NLNQQRDEYWRL--FRQILEALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAK 164
Query: 113 FIQ-------------PDSS-NWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEV 157
+ P SS N T GT YVA E L T K D+YS G++ E+
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 158 IKGKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
I + + NIL + PP D + KV ++ L +D++P R
Sbjct: 225 I-------YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEK--KIIRLLIDHDPNKR 275
Query: 217 PNMQTIC 223
P +T+
Sbjct: 276 PGARTLL 282
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPS 150
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 208 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 261
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
S SN +L R+ P + G V IM C + PE RPN I
Sbjct: 262 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAII 310
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Query: 26 FCTHARHS--FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83
FCT F V EYL G L + + S + SR I L +LH I
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI- 140
Query: 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTA 143
V+RD+ N+LLD + ++DFG+ K + EF GT Y+APE+ K
Sbjct: 141 --VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNH 198
Query: 144 KCDVYSFGVLALEVIKGKHP 163
D +SFGVL E++ G+ P
Sbjct: 199 SVDWWSFGVLLYEMLIGQSP 218
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D +E +RE ++ ++ + IV+ G C A LV E G L L EE+
Sbjct: 53 DTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR--EEIPV 109
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
S ++ ++ + YL VHRD++++NVLL + A +SDFG++K + D S
Sbjct: 110 SNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166
Query: 121 WT-EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
+T AG + + APE K +++ DV+S+GV E + G+ P
Sbjct: 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 91 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 150
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 151 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 207
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 208 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 261
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
S SN +L R+ P + G V IM C + PE RPN I +
Sbjct: 262 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAIILE 312
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 94 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 153
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 154 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 210
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I + + G ++ PE T+K D +SFGVL E+ ++
Sbjct: 211 IY--RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 264
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
S SN +L R+ P + G V IM C + PE RPN I +
Sbjct: 265 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAIILE 315
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 193
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 194 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 247
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
S SN +L R+ P + G V IM C + PE RPN I +
Sbjct: 248 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAIILE 298
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 93 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 152
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 153 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 209
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 210 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 263
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
S SN +L R+ P + G V IM C + PE RPN I
Sbjct: 264 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAII 312
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 83 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 142
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 143 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 199
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 200 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 253
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
S SN +L R+ P + G V IM C + PE RPN I +
Sbjct: 254 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAIILE 304
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 100/235 (42%), Gaps = 24/235 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 117 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 176
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 177 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 233
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I + + G ++ PE T+K D +SFGVL E+ ++
Sbjct: 234 IY--RAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 287
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
S SN +L R+ P + G V IM C + PE RPN I +
Sbjct: 288 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAIILE 338
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
REI L RH +I+K Y + F+V EY+ G L + EE+ R +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARR---L 116
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I A+ Y H + VHRD+ +NVLLD A ++DFG++ + D G
Sbjct: 117 FQQILSAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCG 172
Query: 127 TYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDP 185
+ Y APE ++ + + D++S GV+ ++ G P D D
Sbjct: 173 SPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD------------------DE 214
Query: 186 RLPPLSVDIRGKVISIME 203
+P L IRG V I E
Sbjct: 215 HVPTLFKKIRGGVFYIPE 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 77 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 136
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 137 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQD 193
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 194 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 247
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
S SN +L R+ P + G V IM C + PE RPN I +
Sbjct: 248 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAIILE 298
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
+E+ ++ + H +V + F+V + L G L L + +E
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL--- 119
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
I + AL YL + I+HRD+ N+LLD H++DF IA + P + T A
Sbjct: 120 FICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMA 175
Query: 126 GTYGYVAPELAYTMKVTA---KCDVYSFGVLALEVIKGKHPRDFLSNVSSS 173
GT Y+APE+ + K D +S GV A E+++G+ P S+ SS
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNND----TSAE 56
D+ +FL E ++++ H+NIV+ G + F++ E + G L L +
Sbjct: 103 DELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPS 162
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKF 113
L ++V + IA YL + +HRDI+++N LL A + DFG+A+
Sbjct: 163 SLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARD 219
Query: 114 IQPDSSNWTEFAG----TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
I +++ G ++ PE T+K D +SFGVL E+ ++
Sbjct: 220 IY--RASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPY 273
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
S SN +L R+ P + G V IM C + PE RPN I +
Sbjct: 274 PSKSNQEVLEFVTSGGRMDP-PKNCPGPVYRIMTQ---CWQHQPEDRPNFAIILE 324
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 110 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 169
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ + +N
Sbjct: 170 KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 223
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT Y++PE + + D++S G+ +E+ G++P
Sbjct: 224 --SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ + +N
Sbjct: 108 KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 161
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT Y++PE + + D++S G+ +E+ G++P
Sbjct: 162 --SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ + +N
Sbjct: 108 KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 161
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT Y++PE + + D++S G+ +E+ G++P
Sbjct: 162 --SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
DK+ LRE+ +L ++ H NI+K Y F + +LV E G L + + E+
Sbjct: 69 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 128
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+R +I+ + ++Y+H + IVHRD+ +N+LL+ + + + DFG++ +
Sbjct: 129 AR---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA- 181
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S + GT Y+APE+ + KCDV+S GV+ ++ G P
Sbjct: 182 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 136 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 119 S----NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 187 XXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ Q S
Sbjct: 108 KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSM 159
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT Y++PE + + D++S G+ +E+ G++P
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ Q S
Sbjct: 108 KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSM 159
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT Y++PE + + D++S G+ +E+ G++P
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
DK+ LRE+ +L ++ H NI+K Y F + +LV E G L + + E+
Sbjct: 75 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 134
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPD 117
+R +I+ + ++Y+H + IVHRD+ +N+LL+ + + + DFG++ +
Sbjct: 135 AR---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA- 187
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S + GT Y+APE+ + KCDV+S GV+ ++ G P
Sbjct: 188 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 232
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDT--SAEELGWSRRI 64
E +L E+ H IVK Y F T + +L+ ++L G L L+ + + E++ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF---- 130
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ +A AL +LH I ++RD+ +N+LLD E ++DFG++K F
Sbjct: 131 -YLAELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ T D +SFGVL E++ G P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDT--SAEELGWSRRI 64
E +L E+ H IVK Y F T + +L+ ++L G L L+ + + E++ +
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF---- 130
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ +A AL +LH I ++RD+ +N+LLD E ++DFG++K F
Sbjct: 131 -YLAELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ T D +SFGVL E++ G P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
++ ++E+ L ++RH N +++ G ++LV EY GS S +L + + L
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLL--EVHKKPLQEVE 155
Query: 63 RINVIKGIAHALSYLH-HDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
V G L+YLH H+ ++HRD+ + N+LL + DFG A + P +
Sbjct: 156 IAAVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-- 209
Query: 122 TEFAGTYGYVAPELAYTM---KVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
F GT ++APE+ M + K DV+S G+ +E+ + K P F N S+ +I
Sbjct: 210 --FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL-FNMNAMSALYHIA 266
Query: 179 VNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
NE + S R V S CL P+ RP + + +
Sbjct: 267 QNESPALQSGHWSEYFRNFVDS-------CLQKIPQDRPTSEVLLK 305
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDT--SAEELGWSRRI 64
E +L E+ H IVK Y F T + +L+ ++L G L L+ + + E++ +
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF---- 131
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ +A AL +LH I ++RD+ +N+LLD E ++DFG++K F
Sbjct: 132 -YLAELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ T D +SFGVL E++ G P
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 154
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 155 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 205
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 206 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTS-AEELGW 60
+ + +RE+ VL E IV FYG + E+++ GSL +L E++
Sbjct: 75 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 134
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
I VIKG L+YL I+HRD+ N+L++ E + DFG++ + +N
Sbjct: 135 KVSIAVIKG----LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 188
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT Y++PE + + D++S G+ +E+ G++P
Sbjct: 189 --SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 137 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
++ ++E+ L ++RH N +++ G ++LV EY GS S +L + + L
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLL--EVHKKPLQEVE 116
Query: 63 RINVIKGIAHALSYLH-HDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
V G L+YLH H+ ++HRD+ + N+LL + DFG A + P +
Sbjct: 117 IAAVTHGALQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX-- 170
Query: 122 TEFAGTYGYVAPELAYTM---KVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNIL 178
F GT ++APE+ M + K DV+S G+ +E+ + K P F N S+ +I
Sbjct: 171 --FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL-FNMNAMSALYHIA 227
Query: 179 VNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
NE + S R V S CL P+ RP + + +
Sbjct: 228 QNESPALQSGHWSEYFRNFVDS-------CLQKIPQDRPTSEVLLK 266
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 155
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 156 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 206
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 207 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 133
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 134 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 185 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 54 KEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
DK+ LRE+ +L ++ H NI+K Y F + +LV E G L + + E+
Sbjct: 92 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 151
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+R +I+ + ++Y+H + IVHRD+ +N+LL+ + + + DFG++ +
Sbjct: 152 AR---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA- 204
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S + GT Y+APE+ + KCDV+S GV+ ++ G P
Sbjct: 205 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 54 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 168 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 128
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 129 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 179
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 180 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 131
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 132 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSS 173
N T ++A E T K T K DV+SFGVL E++ +G P ++ +
Sbjct: 183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 242
Query: 174 NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ +L P P + EV C E RP+ +
Sbjct: 243 VYLLQGRRLLQPEYCP---------DPLYEVMLKCWHPKAEMRPSFSEL 282
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 52 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 108
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 109 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 165
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 166 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 211
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 137 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 188 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
DK+ LRE+ +L ++ H NI+K Y F + +LV E G L + + E+
Sbjct: 93 DKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 152
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+R +I+ + ++Y+H + IVHRD+ +N+LL+ + + + DFG++ +
Sbjct: 153 AR---IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA- 205
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S + GT Y+APE+ + KCDV+S GV+ ++ G P
Sbjct: 206 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 84/167 (50%), Gaps = 10/167 (5%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D +E +RE ++ ++ + IV+ G C A LV E G L L EE+
Sbjct: 379 DTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKR--EEIPV 435
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
S ++ ++ + YL VHR+++++NVLL + A +SDFG++K + D S
Sbjct: 436 SNVAELLHQVSMGMKYLEEKNF---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492
Query: 121 WT-EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
+T AG + + APE K +++ DV+S+GV E + G+ P
Sbjct: 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 135
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 136 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSS 173
N T ++A E T K T K DV+SFGVL E++ +G P ++ +
Sbjct: 187 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 246
Query: 174 NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ +L P P + EV C E RP+ +
Sbjct: 247 VYLLQGRRLLQPEYCP---------DPLYEVMLKCWHPKAEMRPSFSEL 286
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 XGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
G+ + V KG+ + S VHRD++++N +LD ++ V+DFG+A+ +
Sbjct: 135 GFG--LQVAKGMKYLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
Query: 119 ----SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSSS 173
N T ++A E T K T K DV+SFGVL E++ +G P ++ +
Sbjct: 186 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 245
Query: 174 NPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ +L P P + EV C E RP+ +
Sbjct: 246 VYLLQGRRLLQPEYCP---------DPLYEVMLKCWHPKAEMRPSFSEL 285
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 8/221 (3%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+ + ++EI +L ++ H N++K+Y +V E + G LS ++ + + L
Sbjct: 76 RADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPE 135
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
R V K S L H ++HRDI NV + + D G+ +F ++
Sbjct: 136 R--TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA 193
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNE 181
GT Y++PE + K D++S G L E+ + P F + N L +
Sbjct: 194 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP--FYGD--KMNLYSLCKK 249
Query: 182 MLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ PPL D + + ++ +C++ +PE RP++ +
Sbjct: 250 IEQCDYPPLPSDHYSE--ELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 54 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 111 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 167
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 168 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFI---Q 115
G+ + V KG+ S VHRD++++N +LD ++ V+DFG+A+ + +
Sbjct: 138 GFG--LQVAKGMKFLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKE 188
Query: 116 PDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DS N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 189 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 26 FCTHARHS--FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIP 83
FCT F V EYL G L + + S + SR I L +LH I
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI- 139
Query: 84 PIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTA 143
V+RD+ N+LLD + ++DFG+ K + F GT Y+APE+ K
Sbjct: 140 --VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNH 197
Query: 144 KCDVYSFGVLALEVIKGKHP 163
D +SFGVL E++ G+ P
Sbjct: 198 SVDWWSFGVLLYEMLIGQSP 217
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 9/166 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI + + H N+VKFYG +L EY G L + D E R
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR---F 109
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEF 124
+ + YLH I HRDI +N+LLD +SDFG+A + ++ +
Sbjct: 110 FHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKM 166
Query: 125 AGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHPRDFLSN 169
GT YVAPEL + A+ DV+S G++ ++ G+ P D S+
Sbjct: 167 CGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 212
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 141
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFI---Q 115
G+ + V KG+ S VHRD++++N +LD ++ V+DFG+A+ + +
Sbjct: 142 GFG--LQVAKGMKFLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 192
Query: 116 PDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DS N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 193 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 137
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFI---Q 115
G+ + V KG+ S VHRD++++N +LD ++ V+DFG+A+ + +
Sbjct: 138 GFG--LQVAKGMKFLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 188
Query: 116 PDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DS N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 189 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 24/177 (13%)
Query: 1 DKKEFLREITV--LTEIRHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTS 54
DK+ + E V L ++H NI++F G +L+ + E GSLS L
Sbjct: 59 DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK---- 114
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDC-------IPPIVHRDISSKNVLLDLEYEAHVSD 107
A + W+ ++ + +A L+YLH D P I HRDI SKNVLL A ++D
Sbjct: 115 ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174
Query: 108 FGIA-KFIQPDSSNWTEF-AGTYGYVAPE-----LAYTMKVTAKCDVYSFGVLALEV 157
FG+A KF S+ T GT Y+APE + + + D+Y+ G++ E+
Sbjct: 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 134
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFI---Q 115
G+ + V KG+ S VHRD++++N +LD ++ V+DFG+A+ + +
Sbjct: 135 GFG--LQVAKGMKFLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
Query: 116 PDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DS N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 186 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFI---Q 115
G+ + V KG+ S VHRD++++N +LD ++ V+DFG+A+ + +
Sbjct: 137 GFG--LQVAKGMKFLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 116 PDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DS N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 188 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 8/196 (4%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ REI + + H NI++ Y + R +L+ EY G L L + +E R
Sbjct: 69 QLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE---QRT 125
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++ +A AL Y H ++HRDI +N+LL L+ E ++DFG + + S
Sbjct: 126 ATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKT 180
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEML 183
GT Y+ PE+ K D++ GVL E++ G P + S+ + + V+
Sbjct: 181 MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKF 240
Query: 184 DPRLPPLSVDIRGKVI 199
+P + D+ K++
Sbjct: 241 PASVPTGAQDLISKLL 256
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 136
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFI---Q 115
G+ + V KG+ S VHRD++++N +LD ++ V+DFG+A+ + +
Sbjct: 137 GFG--LQVAKGMKFLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
Query: 116 PDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DS N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 188 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 18/169 (10%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTS----AEEL 58
+FL E ++ + H N++ G C + S +V Y+++G L + N+T + +
Sbjct: 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI 195
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFI---Q 115
G+ + V KG+ S VHRD++++N +LD ++ V+DFG+A+ + +
Sbjct: 196 GFG--LQVAKGMKFLAS-------KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246
Query: 116 PDS-SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DS N T ++A E T K T K DV+SFGVL E++ P
Sbjct: 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDET--CTRFYT 138
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 139 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL + D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ ++ + H NIVK + + +LV EY G + ++ + E+ +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H I VHRD+ ++N+LLD + ++DFG + +
Sbjct: 118 K----FRQIVSAVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKL 169
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
EF G+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 170 DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHS-FLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
RE V++ + H VK Y FC + Y +NG L + S +E R
Sbjct: 86 RERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFY 142
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTE 123
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S +
Sbjct: 143 TAE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 198
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT YV+PEL D+++ G + +++ G P
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+ L E+ VL + H NI+K Y F R+ +LV E + G L + + E+ +
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV- 140
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLD-LEYEA--HVSDFGIAKFIQPDSSN 120
+IK + ++YLH IVHRD+ +N+LL+ E +A + DFG++ + +
Sbjct: 141 --IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKK 194
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
E GT Y+APE+ K KCDV+S GV+ ++ G P
Sbjct: 195 MKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 116
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 117 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEEL-GWSRRI 64
+REI++L E++H NIVK Y + LV+E+L+ ++ + E + S +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ GIA+ HD ++HRD+ +N+L++ E E ++DFG+A+ +T
Sbjct: 108 QLLNGIAYC-----HD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 125 AGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKG 160
T Y AP+ L + K + D++S G + E++ G
Sbjct: 161 VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEEL-GWSRRI 64
+REI++L E++H NIVK Y + LV+E+L+ ++ + E + S +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ GIA+ HD ++HRD+ +N+L++ E E ++DFG+A+ +T
Sbjct: 108 QLLNGIAYC-----HD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 125 AGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKG 160
T Y AP+ L + K + D++S G + E++ G
Sbjct: 161 VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 115
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 116 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 43/247 (17%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHS-------------FLVYEYLENGSLSVILNND 52
L E+ +L + H+ +V++Y R+ F+ EY EN +L +++++
Sbjct: 50 LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSE 109
Query: 53 TSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112
++ R+ + I ALSY+H I +HRD+ N+ +D + DFG+AK
Sbjct: 110 NLNQQRDEYWRL--FRQILEALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAK 164
Query: 113 FIQ-------------PDSS-NWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEV 157
+ P SS N T GT YVA E L T K D+YS G++ E+
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 158 IKGKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
I + + NIL + PP D + KV ++ L +D++P R
Sbjct: 225 I-------YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEK--KIIRLLIDHDPNKR 275
Query: 217 PNMQTIC 223
P +T+
Sbjct: 276 PGARTLL 282
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 139
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 140 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 114
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 115 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 138
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 139 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 138
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 139 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 113
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 114 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
REI L RH +I+K Y + F+V EY+ G L + + +E SRR+
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE-KESRRL-- 121
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I + Y H + VHRD+ +NVLLD A ++DFG++ + D G
Sbjct: 122 FQQILSGVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCG 177
Query: 127 TYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165
+ Y APE ++ + + D++S GV+ ++ G P D
Sbjct: 178 SPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 139
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 140 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 9/157 (5%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEEL-GWSRRI 64
+REI++L E++H NIVK Y + LV+E+L+ ++ + E + S +
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
++ GIA+ HD ++HRD+ +N+L++ E E ++DFG+A+ +T
Sbjct: 108 QLLNGIAYC-----HD--RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE 160
Query: 125 AGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKG 160
T Y AP+ L + K + D++S G + E++ G
Sbjct: 161 IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 136
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 137 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 141
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 142 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 136
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 137 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 138
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 139 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 136
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 137 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 138
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 139 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 136
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 137 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 138
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 139 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 63 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 120
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 121 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 135
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 136 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI++ + H+++V F+GF F+V E SL L + L +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 123
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGT 127
+ I YLH + ++HRD+ N+ L+ + E + DFG+A ++ D GT
Sbjct: 124 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPR- 186
Y+APE+ + + DV+S G + ++ GK P + S + + I NE P+
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKH 239
Query: 187 LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ P++ + K+ L +P +RP TI +LL
Sbjct: 240 INPVAASLIQKM----------LQTDPTARP---TINELL 266
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 21/220 (9%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI++ + H+++V F+GF F+V E SL L + L +
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 123
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGT 127
+ I YLH + ++HRD+ N+ L+ + E + DFG+A ++ D GT
Sbjct: 124 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPR- 186
Y+APE+ + + DV+S G + ++ GK P + S + + I NE P+
Sbjct: 181 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKH 239
Query: 187 LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
+ P++ + K+ L +P +RP TI +LL
Sbjct: 240 INPVAASLIQKM----------LQTDPTARP---TINELL 266
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI++ + H+++V F+GF F+V E SL L + L +
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 121
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGT 127
+ I YLH + ++HRD+ N+ L+ + E + DFG+A ++ D GT
Sbjct: 122 RQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
Query: 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPR- 186
Y+APE+ + + DV+S G + ++ GK P + S + + I NE P+
Sbjct: 179 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKH 237
Query: 187 LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ P++ + K+ L +P +RP + +
Sbjct: 238 INPVAASLIQKM----------LQTDPTARPTINEL 263
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI++ + H+++V F+GF F+V E SL L + L +
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 127
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGT 127
+ I YLH + + +HRD+ N+ L+ + E + DFG+A ++ D GT
Sbjct: 128 RQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 184
Query: 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
Y+APE+ + + DV+S G + ++ GK P
Sbjct: 185 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 220
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
RE V++ + H VK Y + Y +NG L + S +E R
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET--CTRFYT 135
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS--SNWTEF 124
+ I AL YLH I +HRD+ +N+LL+ + ++DFG AK + P+S + F
Sbjct: 136 AE-IVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT YV+PEL D+++ G + +++ G P
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
DK+ LRE+ +L ++ H NI K Y F + +LV E G L + + E+
Sbjct: 69 DKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDA 128
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+R +I+ + ++Y H + IVHRD+ +N+LL+ + + + DFG++ +
Sbjct: 129 AR---IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA- 181
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S + GT Y+APE+ + KCDV+S GV+ ++ G P
Sbjct: 182 SKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 14/167 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
++ RE+ ++ + H NIVK + + +LV EY G + L GW +
Sbjct: 51 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH------GWMK 104
Query: 63 RINV---IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
+ I A+ Y H I VHRD+ ++N+LLD + ++DFG + +
Sbjct: 105 EKEARAKFRQIVSAVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTF-GN 160
Query: 120 NWTEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 161 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI- 64
+REI++L E+ H NIV R LV+E++E V+ N T ++ +
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+++G+AH + I+HRD+ +N+L++ + ++DFG+A+ ++T
Sbjct: 127 QLLRGVAHCHQHR-------ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 125 AGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGK 161
T Y AP+ L + K + D++S G + E+I GK
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI- 64
+REI++L E+ H NIV R LV+E++E V+ N T ++ +
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+++G+AH + I+HRD+ +N+L++ + ++DFG+A+ ++T
Sbjct: 127 QLLRGVAHCHQHR-------ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 125 AGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGK 161
T Y AP+ L + K + D++S G + E+I GK
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI++ + H+++V F+GF F+V E SL L + L +
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 145
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGT 127
+ I YLH + + +HRD+ N+ L+ + E + DFG+A ++ D GT
Sbjct: 146 RQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
Query: 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
Y+APE+ + + DV+S G + ++ GK P
Sbjct: 203 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI++ + H+++V F+GF F+V E SL L + L +
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL---LELHKRRKALTEPEARYYL 147
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGT 127
+ I YLH + + +HRD+ N+ L+ + E + DFG+A ++ D GT
Sbjct: 148 RQIVLGCQYLHRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
Query: 128 YGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
Y+APE+ + + DV+S G + ++ GK P
Sbjct: 205 PNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPP 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ ++ + H NIVK + + +L+ EY G + ++ + E+ S
Sbjct: 56 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H IVHRD+ ++N+LLD + ++DFG +
Sbjct: 116 K----FRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKL 167
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 168 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI VL +I+H NIV H +L+ + + G L + E SR +I
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LI 122
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVL---LDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH IVHRD+ +N+L LD + + +SDFG++K P S T
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA- 178
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT GYVAPE+ + D +S GV+A ++ G P
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 44/246 (17%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVI-LNNDTSAEELGW 60
KK +REI +L ++RH N+V C + +LV+E++++ L + L + ++
Sbjct: 68 KKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ 127
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I GI S+ I+HRDI +N+L+ + DFG A+ +
Sbjct: 128 KYLFQIINGIGFCHSH-------NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180
Query: 121 WTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKG------------------- 160
+ + T Y APE L +K DV++ G L E+ G
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMC 240
Query: 161 ------KHPRDFLSNVSSSN---PNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDN 211
+H F N + P I E L+ R P LS ++++A CL
Sbjct: 241 LGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSE-------VVIDLAKKCLHI 293
Query: 212 NPESRP 217
+P+ RP
Sbjct: 294 DPDKRP 299
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 11/172 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ F E+ VL + RH NI+ F G+ T + +V ++ E SL L+ + ++ +
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKDNLA-IVTQWCEGSSLYKHLHVQETKFQM--FQ 133
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA--KFIQPDSSN 120
I++ + A + YLH I +HRD+ S N+ L + DFG+A K S
Sbjct: 134 LIDIARQTAQGMDYLHAKNI---IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190
Query: 121 WTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ G+ ++APE+ + + DVYS+G++ E++ G+ P ++N
Sbjct: 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ ++ + H NIVK + + +L+ EY G + ++ + E+ S
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H IVHRD+ ++N+LLD + ++DFG +
Sbjct: 119 K----FRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKL 170
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G Y APEL K + DV+S GV+ ++ G P D
Sbjct: 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 24/236 (10%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDT 53
+++E +EI +L + HRNI +YG +LV E+ GS++ ++ N T
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-T 121
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
L + + I LS+LH ++HRDI +NVLL E + DFG++
Sbjct: 122 KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-----TMKVTAKCDVYSFGVLALEVIKGKHPRDFLS 168
+ F GT ++APE+ K D++S G+ A+E+ +G P L
Sbjct: 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP---LC 235
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
++ L+ PRL S K S +E CL N RP + + +
Sbjct: 236 DMHPMRALFLIPRNPAPRLK--SKKWSKKFQSFIES---CLVKNHSQRPATEQLMK 286
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI VL +I+H NIV H +L+ + + G L + E SR +I
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LI 122
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVL---LDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH IVHRD+ +N+L LD + + +SDFG++K P S T
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA- 178
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT GYVAPE+ + D +S GV+A ++ G P
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ ++ + H NIVK + + +LV EY G + ++ + E+ +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H I VHRD+ ++N+LLD + ++DFG + +
Sbjct: 118 K----FRQIVSAVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKL 169
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ ++ + H NIVK + + +LV EY G + ++ + E+ +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H I VHRD+ ++N+LLD + ++DFG + +
Sbjct: 118 K----FRQIVSAVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKL 169
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI VL +I+H NIV H +L+ + + G L + E SR +I
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LI 122
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVL---LDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH IVHRD+ +N+L LD + + +SDFG++K P S T
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA- 178
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT GYVAPE+ + D +S GV+A ++ G P
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 77/159 (48%), Gaps = 10/159 (6%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI VL +I+H NIV H +L+ + + G L + E SR +I
Sbjct: 66 EIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LI 122
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVL---LDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH IVHRD+ +N+L LD + + +SDFG++K P S T
Sbjct: 123 FQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA- 178
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT GYVAPE+ + D +S GV+A ++ G P
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ ++ + H NIVK + + +LV EY G + ++ + E+ +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H I VHRD+ ++N+LLD + ++DFG + +
Sbjct: 118 K----FRQIVSAVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKL 169
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 170 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 105/247 (42%), Gaps = 43/247 (17%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHS-------------FLVYEYLENGSLSVILNND 52
L E+ +L + H+ +V++Y R+ F+ EY EN +L +++++
Sbjct: 50 LSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSE 109
Query: 53 TSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112
++ R+ + I ALSY+H I +HR++ N+ +D + DFG+AK
Sbjct: 110 NLNQQRDEYWRL--FRQILEALSYIHSQGI---IHRNLKPXNIFIDESRNVKIGDFGLAK 164
Query: 113 FIQ-------------PDSS-NWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEV 157
+ P SS N T GT YVA E L T K D YS G++ E
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEX 224
Query: 158 IKGKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
I + + NIL + PP D + KV ++ L +D++P R
Sbjct: 225 I-------YPFSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEK--KIIRLLIDHDPNKR 275
Query: 217 PNMQTIC 223
P +T+
Sbjct: 276 PGARTLL 282
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + ++H NIV+ + + +LV++ + G L D A E +
Sbjct: 46 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVARE--Y 99
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ I L ++H + IVHRD+ +N+LL + + ++DFG+A +Q D
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
W FAGT GY++PE+ D+++ GV+ ++ G P
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 9/166 (5%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + ++H NIV+ + + +LV++ + G L + + E
Sbjct: 46 DHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSE 102
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ + I+ I A+ + H +VHRD+ +N+LL + + ++DFG+A +Q D
Sbjct: 103 ADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD 159
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
W FAGT GY++PE+ D+++ GV+ ++ G P
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ ++ + H NIVK + + +LV EY G + ++ + E+ +
Sbjct: 58 QKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H I VHRD+ ++N+LLD + ++DFG + +
Sbjct: 118 K----FRQIVSAVQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKL 169
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G Y APEL K + DV+S GV+ ++ G P D
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + ++H NIV+ + + +LV++ + G L D A E +
Sbjct: 46 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF----EDIVARE--Y 99
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ I L ++H + IVHRD+ +N+LL + + ++DFG+A +Q D
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
W FAGT GY++PE+ D+++ GV+ ++ G P
Sbjct: 160 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ ++ + H NIVK + + +LV EY G + ++ + E+ +
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 118
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H I VHRD+ ++N+LLD + ++DFG + +
Sbjct: 119 K----FRQIVSAVQYCHQKYI---VHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKL 170
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 171 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 10/161 (6%)
Query: 7 REITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
+EIT L H NIVK + H+FLV E L G L + E S
Sbjct: 54 KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY--- 110
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE---YEAHVSDFGIAKFIQPDSSNWT 122
+++ + A+S++H +VHRD+ +N+L E E + DFG A+ PD+
Sbjct: 111 IMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 123 EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y APEL CD++S GV+ ++ G+ P
Sbjct: 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL--SVILNNDTSAEELGWSR 62
L E+ VL ++ H NI+K Y F R+ +LV E G L +IL S +
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA--- 124
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSS 119
++K + +YLH IVHRD+ +N+LL+ + + DFG++ +
Sbjct: 125 --VIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GG 178
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
E GT Y+APE+ K KCDV+S GV+ ++ G P
Sbjct: 179 KMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 7/159 (4%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
E+ + +++H +I++ Y + + + +LV E NG ++ L N +R + +
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFM 118
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ-PDSSNWTEFAG 126
I + YLH I+HRD++ N+LL ++DFG+A ++ P ++T G
Sbjct: 119 HQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCG 174
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165
T Y++PE+A + DV+S G + ++ G+ P D
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 18/223 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E ++ + H ++V+ G C LV + + +G L ++ + +G
Sbjct: 86 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLL 142
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+N IA + YL + VHRD++++NVL+ ++DFG+A+ ++ D +
Sbjct: 143 LNWCVQIAKGMMYLEERRL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 199
Query: 124 FAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN 180
G ++A E + K T + DV+S+GV E++ G P D + + P++L
Sbjct: 200 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLEK 257
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
P+ P ++D + V C + +SRP + +
Sbjct: 258 GERLPQPPICTID-------VYMVMVKCWMIDADSRPKFKELA 293
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 18/223 (8%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
EF+ E ++ + H ++V+ G C LV + + +G L ++ + +G
Sbjct: 63 EFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHE--HKDNIGSQLL 119
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+N IA + YL +VHRD++++NVL+ ++DFG+A+ ++ D +
Sbjct: 120 LNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA 176
Query: 124 FAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILVN 180
G ++A E + K T + DV+S+GV E++ G P D + + P++L
Sbjct: 177 DGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLEK 234
Query: 181 EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTIC 223
P+ P ++D+ ++ C + +SRP + +
Sbjct: 235 GERLPQPPICTIDVYMVMVK-------CWMIDADSRPKFKELA 270
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL--SVILNNDTSAEELGWSR 62
L E+ VL ++ H NI+K Y F R+ +LV E G L +IL S +
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA--- 107
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPDSS 119
++K + +YLH IVHRD+ +N+LL+ + + DFG++ +
Sbjct: 108 --VIMKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GG 161
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153
E GT Y+APE+ K KCDV+S GV+
Sbjct: 162 KMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVI 194
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
REI+ L +RH +I+K Y +V EY N I+ D +E+ +RR
Sbjct: 57 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF-- 112
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I A+ Y H IVHRD+ +N+LLD ++DFG++ I D + G
Sbjct: 113 FQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSCG 168
Query: 127 TYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165
+ Y APE ++ + + DV+S GV+ ++ + P D
Sbjct: 169 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
REI+ L +RH +I+K Y +V EY N I+ D +E+ +RR
Sbjct: 53 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF-- 108
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I A+ Y H IVHRD+ +N+LLD ++DFG++ I D + G
Sbjct: 109 FQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSCG 164
Query: 127 TYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165
+ Y APE ++ + + DV+S GV+ ++ + P D
Sbjct: 165 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
REI+ L +RH +I+K Y +V EY N I+ D +E+ +RR
Sbjct: 63 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF-- 118
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I A+ Y H IVHRD+ +N+LLD ++DFG++ I D + G
Sbjct: 119 FQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSCG 174
Query: 127 TYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165
+ Y APE ++ + + DV+S GV+ ++ + P D
Sbjct: 175 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
REI+ L +RH +I+K Y +V EY N I+ D +E+ +RR
Sbjct: 62 REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ--EARRF-- 117
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I A+ Y H IVHRD+ +N+LLD ++DFG++ I D + G
Sbjct: 118 FQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSN-IMTDGNFLKTSCG 173
Query: 127 TYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRD 165
+ Y APE ++ + + DV+S GV+ ++ + P D
Sbjct: 174 SPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 11/167 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + ++H NIV+ + + +LV++ + G L + + E
Sbjct: 73 DHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSE 129
Query: 61 SRRINVIKGIAHALSYLH-HDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQP 116
+ + I I +++++H HD IVHRD+ +N+LL + + ++DFG+A +Q
Sbjct: 130 ADASHCIHQILESVNHIHQHD----IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ W FAGT GY++PE+ D+++ GV+ ++ G P
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 14/164 (8%)
Query: 7 REITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
RE +L ++ H +I+ + FLV++ + G L L + E +
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE---KETRS 204
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
+++ + A+S+LH + I VHRD+ +N+LLD + +SDFG + ++P E
Sbjct: 205 IMRSLLEAVSFLHANNI---VHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELC 260
Query: 126 GTYGYVAPE-LAYTMKVT-----AKCDVYSFGVLALEVIKGKHP 163
GT GY+APE L +M T + D+++ GV+ ++ G P
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTS 54
D+K + RE + + RH NI+ F +RHS +L+ Y E GSL L T
Sbjct: 72 DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT- 130
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
L + ++ IA L++LH + P I HRD+ SKN+L+ + ++D G
Sbjct: 131 ---LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 187
Query: 110 IAKFIQPDSSNWTEFA-----GTYGYVAPE-LAYTMKVTA-----KCDVYSFGVLALEVI 158
+A + S+N + GT Y+APE L T++V + D+++FG++ EV
Sbjct: 188 LA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
Query: 159 K 159
+
Sbjct: 247 R 247
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTS 54
D+K + RE + + RH NI+ F +RHS +L+ Y E GSL L T
Sbjct: 43 DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT- 101
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
L + ++ IA L++LH + P I HRD+ SKN+L+ + ++D G
Sbjct: 102 ---LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158
Query: 110 IAKFIQPDSSNWTEFA-----GTYGYVAPE-LAYTMKVTA-----KCDVYSFGVLALEVI 158
+A + S+N + GT Y+APE L T++V + D+++FG++ EV
Sbjct: 159 LA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
Query: 159 K 159
+
Sbjct: 218 R 218
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTS 54
D+K + RE + + RH NI+ F +RHS +L+ Y E GSL L T
Sbjct: 43 DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTT- 101
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
L + ++ IA L++LH + P I HRD+ SKN+L+ + ++D G
Sbjct: 102 ---LDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158
Query: 110 IAKFIQPDSSNWTEFA-----GTYGYVAPE-LAYTMKVTA-----KCDVYSFGVLALEVI 158
+A + S+N + GT Y+APE L T++V + D+++FG++ EV
Sbjct: 159 LA-VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
Query: 159 K 159
+
Sbjct: 218 R 218
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN----------- 51
++ L E VL ++ H +++K YG C+ L+ EY + GSL L
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 52 ------------DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDL 99
D A +G I+ I+ + YL +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAE 185
Query: 100 EYEAHVSDFGIAKFIQPDSSNWTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+ +SDFG+++ + + S G ++A E + T + DV+SFGVL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 158 I 158
+
Sbjct: 246 V 246
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHS------FLVYEYLENGSLSVILNNDTSAEELGW 60
REI ++H N+++F R S +L+ + + GSL+ L + + W
Sbjct: 58 REIFSTPGMKHENLLQF--IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITW 111
Query: 61 SRRINVIKGIAHALSYLHHDC--------IPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112
+ +V + ++ LSYLH D P I HRD SKNVLL + A ++DFG+A
Sbjct: 112 NELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAV 171
Query: 113 FIQPDS--SNWTEFAGTYGYVAPE-----LAYTMKVTAKCDVYSFGVLALEVI 158
+P + GT Y+APE + + + D+Y+ G++ E++
Sbjct: 172 RFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 198
Query: 106 SDFGIAKFIQPDS--SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ I N T ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 26 FCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85
F T +R F V EY+ G L + E I+ AL+YLH I
Sbjct: 79 FQTESR-LFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNYLHERGI--- 131
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ NVLLD E ++D+G+ K + F GT Y+APE+
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 191
Query: 146 DVYSFGVLALEVIKGKHPRDFLSNVSSSNPN 176
D ++ GVL E++ G+ P D + SS NP+
Sbjct: 192 DWWALGVLMFEMMAGRSPFDIVG--SSDNPD 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 26 FCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85
F T +R F V EY+ G L + E R + I+ AL+YLH I
Sbjct: 122 FQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEE--HARFYSAE-ISLALNYLHERGI--- 174
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAK-FIQPDSSNWTEFAGTYGYVAPELAYTMKVTAK 144
++RD+ NVLLD E ++D+G+ K ++P + T F GT Y+APE+
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAPEILRGEDYGFS 233
Query: 145 CDVYSFGVLALEVIKGKHPRDFLSNVSSSNPN 176
D ++ GVL E++ G+ P D + SS NP+
Sbjct: 234 VDWWALGVLMFEMMAGRSPFDIVG--SSDNPD 263
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDT--SAEELGWSRRI 64
E +L ++ H +VK Y F T + +L+ ++L G L L+ + + E++ +
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF---- 134
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ +A L +LH I ++RD+ +N+LLD E ++DFG++K F
Sbjct: 135 -YLAELALGLDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ + D +S+GVL E++ G P
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN----------- 51
++ L E VL ++ H +++K YG C+ L+ EY + GSL L
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 52 ------------DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDL 99
D A +G I+ I+ + YL +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAE 185
Query: 100 EYEAHVSDFGIAKFIQPDSSNWTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+ +SDFG+++ + + S G ++A E + T + DV+SFGVL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 158 I 158
+
Sbjct: 246 V 246
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 26 FCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85
F T +R F V EY+ G L + E I+ AL+YLH I
Sbjct: 75 FQTESR-LFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNYLHERGI--- 127
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ NVLLD E ++D+G+ K + F GT Y+APE+
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 187
Query: 146 DVYSFGVLALEVIKGKHPRDFLSNVSSSNPN 176
D ++ GVL E++ G+ P D + SS NP+
Sbjct: 188 DWWALGVLMFEMMAGRSPFDIVG--SSDNPD 216
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 129 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 188
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 189 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 244
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 245 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWS 61
++ RE+ + + H NIVK + + +LV EY G + ++ + E+ +
Sbjct: 58 QKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA 117
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+ + I A+ Y H I VHRD+ ++N+LLD + ++DFG + +
Sbjct: 118 K----FRQIVSAVQYCHQKFI---VHRDLKAENLLLDADXNIKIADFGFSNEFTF-GNKL 169
Query: 122 TEFAGTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHPRD 165
F G Y APEL K + DV+S GV+ ++ G P D
Sbjct: 170 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 26 FCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPI 85
F T +R F V EY+ G L + E I+ AL+YLH I
Sbjct: 90 FQTESR-LFFVIEYVNGGDLMFHMQRQRKLPE---EHARFYSAEISLALNYLHERGI--- 142
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ NVLLD E ++D+G+ K + F GT Y+APE+
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSV 202
Query: 146 DVYSFGVLALEVIKGKHPRDFLSNVSSSNPN 176
D ++ GVL E++ G+ P D + SS NP+
Sbjct: 203 DWWALGVLMFEMMAGRSPFDIVG--SSDNPD 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 102/232 (43%), Gaps = 22/232 (9%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 56 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 115
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 116 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 172
Query: 114 IQPDSSNWTEFAG--TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNV 170
I G +++PE T DV+SFGV+ E+ + P LSN
Sbjct: 173 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 171 SSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
++ +LD P D+ ++E+ +C NP+ RP+ I
Sbjct: 233 QVLR-FVMEGGLLDK--PDNCPDM------LLELMRMCWQYNPKMRPSFLEI 275
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFL--VYEYLENGSLSVILNNDTSAEELGWSRRI 64
+EI +L + H +I+K+ G C A + L V EY+ GSL L + +G ++ +
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGLAQLL 137
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--- 121
+ I ++YLH +HRD++++NVLLD + + DFG+AK + +
Sbjct: 138 LFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVR 194
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE K DV+SFGV E++
Sbjct: 195 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI + ++H+NIV++ G + + E + GSLS +L + +
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA--HVSDFGIAKFIQPDSSNWTEFA 125
K I L YLH + IVHRDI NVL++ Y +SDFG +K + + F
Sbjct: 129 KQILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT 184
Query: 126 GTYGYVAPEL--AYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ D++S G +E+ GK P
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 224
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + ++H NIV+ + + H +L+++ + G L + + E
Sbjct: 64 DHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSE 120
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ + I+ I A+ + H +VHRD+ +N+LL + + ++DFG+A ++ +
Sbjct: 121 ADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE 177
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
W FAGT GY++PE+ D+++ GV+ ++ G P
Sbjct: 178 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 70 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 129
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 130 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLTARNVLVTENNVMKI 185
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 186 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 240
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR--IN 65
EI VL +I+H NIV H +LV + + G L D E+ ++ +
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELF-----DRIVEKGFYTEKDAST 124
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLL---DLEYEAHVSDFGIAKFIQPDSSNWT 122
+I+ + A+ YLH IVHRD+ +N+L D E + +SDFG++K ++ +
Sbjct: 125 LIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMS 180
Query: 123 EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT GYVAPE+ + D +S GV+A ++ G P
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 9 ITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIK 68
+ + + H +IV+ G C + LV +YL GSL + A LG +N
Sbjct: 84 MLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGV 140
Query: 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAG 126
IA + YL + VHR+++++NVLL + V+DFG+A + PD ++E
Sbjct: 141 QIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
++A E + K T + DV+S+GV E++
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 6 LREITVLTEIRHRNIVKFYGFC--THARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+RE VL ++ H+NIVK + T RH L+ E+ GSL +L ++A L S
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL----DLEYEAHVSDFGIAKFIQPDSS 119
+ V++ + +++L + IVHR+I N++ D + ++DFG A+ ++ D
Sbjct: 115 LIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDE 170
Query: 120 NWTEFAGTYGYVAPEL--------AYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT Y+ P++ + K A D++S GV G P
Sbjct: 171 QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEX 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 198
Query: 106 SDFGIAKFIQ--PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I T ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMRI 198
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 6 LREITVLTEIRHRNIVKFYGFC--THARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+RE VL ++ H+NIVK + T RH L+ E+ GSL +L ++A L S
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL----DLEYEAHVSDFGIAKFIQPDSS 119
+ V++ + +++L + IVHR+I N++ D + ++DFG A+ ++ D
Sbjct: 115 LIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDE 170
Query: 120 NWTEFAGTYGYVAPEL--------AYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT Y+ P++ + K A D++S GV G P
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 30/181 (16%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNN----------- 51
++ L E VL ++ H +++K YG C+ L+ EY + GSL L
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 52 ------------DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDL 99
D A +G I+ I+ + YL +VHRD++++N+L+
Sbjct: 131 GGSRNSSSLDHPDERALTMG--DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAE 185
Query: 100 EYEAHVSDFGIAKFIQPDSSNWTEFAGT--YGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+ +SDFG+++ + + S G ++A E + T + DV+SFGVL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 158 I 158
+
Sbjct: 246 V 246
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE---ERARFY 115
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
I AL YLH +V+RDI +N++LD + ++DFG+ K D + F G
Sbjct: 116 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 172
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
REI+ L +RH +I+K Y T +V EY I+ E+ G RR
Sbjct: 58 REISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG--RRF-- 113
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I A+ Y H IVHRD+ +N+LLD ++DFG++ I D + G
Sbjct: 114 FQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSN-IMTDGNFLKTSCG 169
Query: 127 TYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHPRD--FLSNV 170
+ Y APE + + + DV+S G++ ++ G+ P D F+ N+
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL 216
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 75 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 134
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 135 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 190
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 191 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 245
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 198
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
EI + ++H+NIV++ G + + E + GSLS +L + +
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA--HVSDFGIAKFIQPDSSNWTEF 124
K I L YLH + IVHRDI NVL++ Y +SDFG +K + + F
Sbjct: 114 TKQILEGLKYLHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETF 169
Query: 125 AGTYGYVAPEL--AYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ D++S G +E+ GK P
Sbjct: 170 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPP 210
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE---ERARFY 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
I AL YLH +V+RDI +N++LD + ++DFG+ K D + F G
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE---ERARFY 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
I AL YLH +V+RDI +N++LD + ++DFG+ K D + F G
Sbjct: 111 GAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 103/219 (47%), Gaps = 22/219 (10%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWSRRINV 66
EI L +RH++I + Y A F+V EY G L I++ D +EE R+ V
Sbjct: 58 EIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE---ETRV-V 113
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGI-AKFIQPDSSNWTEFA 125
+ I A++Y+H HRD+ +N+L D ++ + DFG+ AK +
Sbjct: 114 FRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC 170
Query: 126 GTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLD 184
G+ Y APEL + ++ DV+S G+L ++ G P D NV + I+ +
Sbjct: 171 GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD-DNVMALYKKIMRGKYDV 229
Query: 185 PR-LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ L P S+ + +++ + +P+ R +M+ +
Sbjct: 230 PKWLSPSSILLLQQMLQV----------DPKKRISMKNL 258
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 72 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 131
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 132 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 187
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 188 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 242
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 198
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE---ERARFY 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
I AL YLH +V+RDI +N++LD + ++DFG+ K D + F G
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 198
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE---ERARFY 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
I AL YLH +V+RDI +N++LD + ++DFG+ K D + F G
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCG 167
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 8/152 (5%)
Query: 9 ITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIK 68
+ + + H +IV+ G C + LV +YL GSL + A LG +N
Sbjct: 66 MLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGA--LGPQLLLNWGV 122
Query: 69 GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN--WTEFAG 126
IA + YL + VHR+++++NVLL + V+DFG+A + PD ++E
Sbjct: 123 QIAKGMYYLEEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
++A E + K T + DV+S+GV E++
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE---ERARFY 110
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
I AL YLH +V+RDI +N++LD + ++DFG+ K D + F G
Sbjct: 111 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 167
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 70/157 (44%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE---ERARFY 113
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
I AL YLH +V+RDI +N++LD + ++DFG+ K D + F G
Sbjct: 114 GAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG 170
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 22/220 (10%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCT--HARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ +EI +L ++ H N+VK + H ++V+E + G + + +E+
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
++IKGI YLH+ I+HRDI N+L+ + ++DFG++ + +
Sbjct: 141 FYFQDLIKGI----EYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 121 WTEFAGTYGYVAPE-LAYTMKVTA--KCDVYSFGVLALEVIKGKHPRDFLSN-VSSSNPN 176
+ GT ++APE L+ T K+ + DV++ GV + G+ P F+ + +
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP--FMDERIMCLHSK 251
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
I + P P ++ D++ + + LD NPESR
Sbjct: 252 IKSQALEFPDQPDIAEDLKDLITRM-------LDKNPESR 284
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 198
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 6 LREITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
L E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE---DRAR 111
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
I AL YLH + +V+RD+ +N++LD + ++DFG+ K D + F
Sbjct: 112 FYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 169
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ D + GV+ E++ G+ P
Sbjct: 170 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 6 LREITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
L E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE---DRAR 113
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
I AL YLH + +V+RD+ +N++LD + ++DFG+ K D + F
Sbjct: 114 FYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 171
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ D + GV+ E++ G+ P
Sbjct: 172 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 22/232 (9%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 114 IQPDSSNWTEFAG--TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNV 170
I G +++PE T DV+SFGV+ E+ + P LSN
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 171 SSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 242 QVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 284
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 6 LREITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
L E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE---DRAR 251
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
I AL YLH + +V+RD+ +N++LD + ++DFG+ K D + F
Sbjct: 252 FYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 309
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ D + GV+ E++ G+ P
Sbjct: 310 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 6 LREITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
L E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE---DRAR 112
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
I AL YLH + +V+RD+ +N++LD + ++DFG+ K D + F
Sbjct: 113 FYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXF 170
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 6 LREITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
L E VL RH + Y F TH R F V EY G L L+ + E R
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCF-VMEYANGGELFFHLSRERVFSE---DRAR 254
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
I AL YLH + +V+RD+ +N++LD + ++DFG+ K D + F
Sbjct: 255 FYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF 312
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ D + GV+ E++ G+ P
Sbjct: 313 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLVYEYLENGSL------SVILNND- 52
D ++F E+ VL ++ H NI+ G C H + +L EY +G+L S +L D
Sbjct: 68 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 53 ------TSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVS 106
++A L + ++ +A + YL +HRD++++N+L+ Y A ++
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIA 184
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
DFG+++ + L Y++ T DV+S+GVL E++
Sbjct: 185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIV 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLVYEYLENGSL------SVILNND- 52
D ++F E+ VL ++ H NI+ G C H + +L EY +G+L S +L D
Sbjct: 58 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 117
Query: 53 ------TSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVS 106
++A L + ++ +A + YL +HRD++++N+L+ Y A ++
Sbjct: 118 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIA 174
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
DFG+++ + L Y++ T DV+S+GVL E++
Sbjct: 175 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIV 225
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + +++H NIV+ + +LV++ + G L + + E
Sbjct: 48 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSE 104
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ + I+ I +++Y H + IVHR++ +N+LL + + ++DFG+A + D
Sbjct: 105 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-D 160
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S W FAGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + +++H NIV+ + +LV++ + G L + + E
Sbjct: 47 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSE 103
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ + I+ I +++Y H + IVHR++ +N+LL + + ++DFG+A + D
Sbjct: 104 ADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-D 159
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S W FAGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 160 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + +++H NIV+ + +LV++ + G L + + E
Sbjct: 48 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSE 104
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ + I+ I +++Y H + I VHR++ +N+LL + + ++DFG+A + D
Sbjct: 105 ADASHCIQQILESIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-D 160
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S W FAGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + +++H NIV+ + +LV++ + G L + + E
Sbjct: 71 DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSE 127
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ + I+ I +++Y H + I VHR++ +N+LL + + ++DFG+A + D
Sbjct: 128 ADASHCIQQILESIAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-D 183
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
S W FAGT GY++PE+ + D+++ GV+ ++ G P
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR-- 63
+REI+++ E++H NIV+ Y LV+E+++N L + +G + R
Sbjct: 51 IREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGL 105
Query: 64 -INVIK----GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
+N++K + L++ H + I+HRD+ +N+L++ + + DFG+A+
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162
Query: 119 SNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGK 161
+ ++ T Y AP+ L + + D++S G + E+I GK
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E +L E++H IV Y F T + +L+ EYL G L + L + E
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFY 126
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I+ AL +LH I ++RD+ +N++L+ + ++DFG+ K D + F G
Sbjct: 127 LAEISMALGHLHQKGI---IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCG 183
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D +S G L +++ G P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENG-------SLSVILNNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G SL + N+
Sbjct: 61 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 177
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 178 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 235
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 236 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 280
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
E +L E++H IV Y F T + +L+ EYL G L + L + E
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFME---DTACFY 126
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ I+ AL +LH I ++RD+ +N++L+ + ++DFG+ K D + F G
Sbjct: 127 LAEISMALGHLHQKGI---IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG 183
Query: 127 TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T Y+APE+ D +S G L +++ G P
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 105/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENG-------SLSVILNNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G SL + N+
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 188 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 246 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 290
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFC-THARHSF-LVYEYLENGSLSVILNNDTSAEELG 59
+++F REI +L + IVK+ G R S LV EYL +G L L + L
Sbjct: 55 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLD 112
Query: 60 WSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
SR + I + YL C VHRD++++N+L++ E ++DFG+AK + D
Sbjct: 113 ASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDK 168
Query: 119 SNWT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE + + DV+SFGV+ E+
Sbjct: 169 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFC-THARHSF-LVYEYLENGSLSVILNNDTSAEELG 59
+++F REI +L + IVK+ G R S LV EYL +G L L + L
Sbjct: 56 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLD 113
Query: 60 WSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
SR + I + YL C VHRD++++N+L++ E ++DFG+AK + D
Sbjct: 114 ASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDK 169
Query: 119 SNWT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE + + DV+SFGV+ E+
Sbjct: 170 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFC-THARHSF-LVYEYLENGSLSVILNNDTSAEELG 59
+++F REI +L + IVK+ G R S LV EYL +G L L + L
Sbjct: 68 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLD 125
Query: 60 WSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
SR + I + YL C VHRD++++N+L++ E ++DFG+AK + D
Sbjct: 126 ASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181
Query: 119 SNWT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE + + DV+SFGV+ E+
Sbjct: 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+ V EY+ G L + +E + + I+ L +LH I ++RD+
Sbjct: 96 YFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGLFFLHKRGI---IYRDLKLD 149
Query: 94 NVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153
NV+LD E ++DFG+ K D EF GT Y+APE+ D +++GVL
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 154 ALEVIKGKHPRD 165
E++ G+ P D
Sbjct: 210 LYEMLAGQPPFD 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 62 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 121
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 122 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 178
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 179 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 236
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 237 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 181 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 239 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 283
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 65 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 181
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 182 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 240 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 284
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 64 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 124 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 180
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 181 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 239 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 283
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWSRRINV 66
EI VL +I+H NIV H +LV + + G L IL E+ V
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK----DASLV 111
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLL---DLEYEAHVSDFGIAKFIQPDSSNWTE 123
I+ + A+ YLH + IVHRD+ +N+L + + ++DFG++K Q + +
Sbjct: 112 IQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ--NGIMST 166
Query: 124 FAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT GYVAPE+ + D +S GV+ ++ G P
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ REI +L + H +IVK+ G C + LV EY+ GSL L +G ++
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQ 112
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW- 121
+ + I ++YLH +HR ++++NVLLD + + DFG+AK + P+ +
Sbjct: 113 LLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYY 168
Query: 122 ---TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE K DV+SFGV E++
Sbjct: 169 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H + +HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 129 -----FLYQILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDH 180
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 14/160 (8%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHA--RHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ REI +L + H +IVK+ G C + LV EY+ GSL L +G ++
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC----VGLAQ 113
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW- 121
+ + I ++YLH +HR ++++NVLLD + + DFG+AK + P+ +
Sbjct: 114 LLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYY 169
Query: 122 ---TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE K DV+SFGV E++
Sbjct: 170 RVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 129 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEF 135
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 136 SFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 191
Query: 106 SDFGIAKFIQ--PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I T ++APE + T + DV+SFGVL E+
Sbjct: 192 ADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 71 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 188 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 246 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 174
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 175 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 233 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 277
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 31/188 (16%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL------------ 49
+ +F RE ++ E + NIVK G C + L++EY+ G L+ L
Sbjct: 94 QADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLS 153
Query: 50 NNDTSAEE---------LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE 100
++D S L + ++ + + +A ++YL VHRD++++N L+
Sbjct: 154 HSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGEN 210
Query: 101 YEAHVSDFGIAKFIQPDSSNWTEFAGTYG----YVAPELAYTMKVTAKCDVYSFGVLALE 156
++DFG+++ I S+++ + G ++ PE + + T + DV+++GV+ E
Sbjct: 211 MVVKIADFGLSRNIY--SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWE 268
Query: 157 VIK-GKHP 163
+ G P
Sbjct: 269 IFSYGLQP 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 9/166 (5%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D ++ RE + ++H NIV+ + + H +L+++ + G L + + E
Sbjct: 53 DHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSE 109
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA---HVSDFGIAKFIQPD 117
+ + I+ I A+ + H +VHR++ +N+LL + + ++DFG+A ++ +
Sbjct: 110 ADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
W FAGT GY++PE+ D+++ GV+ ++ G P
Sbjct: 167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 107/236 (45%), Gaps = 29/236 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
++++ EI +L H NIVK + + +++ E+ G++ ++ E
Sbjct: 52 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM---LELERPLTES 108
Query: 63 RINVI-KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGI-AKFIQPDSSN 120
+I V+ K AL+YLH + I+HRD+ + N+L L+ + ++DFG+ AK +
Sbjct: 109 QIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQR 165
Query: 121 WTEFAGTYGYVAPEL-----AYTMKVTAKCDVYSFGVLALEV--IKGKH----PRDFLSN 169
F GT ++APE+ + K DV+S G+ +E+ I+ H P L
Sbjct: 166 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK 225
Query: 170 VSSSNPNILVN---------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
++ S P L + L L +VD R +++ F+ +D+N R
Sbjct: 226 IAKSEPPTLAQPSRWSSNFKDFLKKCLEK-NVDARWTTSQLLQHPFVTVDSNKPIR 280
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 133 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 93 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N ++ ++ + DFG+ +
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 210 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 267
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ + E+ +C NP+ RP+ I
Sbjct: 268 NEQVLR-FVMEGGLLDK--PDNCPDM------LFELMRMCWQYNPKMRPSFLEI 312
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H + +HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 129 -----FLYQILRGLKYIHSANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 180
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 104/234 (44%), Gaps = 26/234 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVIL-------NNDT 53
++ EFL E +V+ E ++V+ G + + + ++ E + G L L N+
Sbjct: 58 ERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 54 SAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
S+ I + IA ++YL+ + VHRD++++N + ++ + DFG+ +
Sbjct: 118 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRD 174
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G +++PE T DV+SFGV+ E+ + P LS
Sbjct: 175 IY--ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
N ++ +LD P D+ ++E+ +C NP+ RP+ I
Sbjct: 233 NEQVLR-FVMEGGLLDK--PDNCPDM------LLELMRMCWQYNPKMRPSFLEI 277
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 133 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 184
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 129 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 7 REITVLTEIRHRNIVKFYGFCT-HARHSF-LVYEYLENGSLSVILNNDTSAEELGWSRRI 64
+EI +L + H +I+K+ G C S LV EY+ GSL L + +G ++ +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLL 120
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--- 121
+ I ++YLH +HR+++++NVLLD + + DFG+AK + P+ +
Sbjct: 121 LFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRV 176
Query: 122 -TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE K DV+SFGV E++
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ Y G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEY 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 198
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 77 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 136
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 137 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 188
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 69 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 128
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 129 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 180
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 33/186 (17%)
Query: 1 DKKEFLREITVLTEIR-HRNIVKFYGF--CTHARHSFLVYEYLENGSLSVILNNDTSAEE 57
D + REI +LTE+ H NIV + R +LV++Y+E +VI A
Sbjct: 51 DAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI-----RANI 105
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK----- 112
L + V+ + + YLH + +HRD+ N+LL+ E V+DFG+++
Sbjct: 106 LEPVHKQYVVYQLIKVIKYLHSGGL---LHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162
Query: 113 ---------FIQPDSSNW-------TEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLAL 155
I ++ N+ T++ T Y APE L + K T D++S G +
Sbjct: 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILG 222
Query: 156 EVIKGK 161
E++ GK
Sbjct: 223 EILCGK 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 133 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 126
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 127 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 67 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 126
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 127 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 178
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 133
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 134 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 71 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 130
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 131 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 7 REITVLTEIRHRNIVKFYGFCT-HARHSF-LVYEYLENGSLSVILNNDTSAEELGWSRRI 64
+EI +L + H +I+K+ G C S LV EY+ GSL L + +G ++ +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLL 120
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW--- 121
+ I ++YLH +HR+++++NVLLD + + DFG+AK + P+ +
Sbjct: 121 LFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAV-PEGHEYYRV 176
Query: 122 -TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ + APE K DV+SFGV E++
Sbjct: 177 REDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 75 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 134
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 135 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 186
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 66 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 125
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 126 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 177
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 133 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D LRE+ +L ++ H NI+K + + ++V E G L + E
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA 123
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY---EAHVSDFGIAKFIQPD 117
+R +IK + ++Y+H IVHRD+ +N+LL+ + + + DFG++ Q +
Sbjct: 124 AR---IIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + GT Y+APE+ KCDV+S GV+ ++ G P
Sbjct: 178 -TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+ +L EIRH NI+ + + L+ E + G L L E L
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTED 129
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + YLH I H D+ +N+ LLD + DFGIA I+
Sbjct: 130 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 185
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ + GT +VAPE+ + + D++S GV+ ++ G P ++ L+N+S
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 245
Query: 172 SSN 174
+ N
Sbjct: 246 AVN 248
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+ +L EIRH NI+ + + L+ E + G L L E L
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTED 115
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + YLH I H D+ +N+ LLD + DFGIA I+
Sbjct: 116 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 171
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ + GT +VAPE+ + + D++S GV+ ++ G P ++ L+N+S
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 231
Query: 172 SSN 174
+ N
Sbjct: 232 AVN 234
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 17/183 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+ +L EIRH NI+ + + L+ E + G L L E L
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL---AEKESLTED 108
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + YLH I H D+ +N+ LLD + DFGIA I+
Sbjct: 109 EATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 164
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ + GT +VAPE+ + + D++S GV+ ++ G P ++ L+N+S
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 224
Query: 172 SSN 174
+ N
Sbjct: 225 AVN 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 89 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 148
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 149 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 200
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 71 LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 130
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 131 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDH 182
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 29/179 (16%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ Y G+L L
Sbjct: 83 DLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEY 142
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
N E++ + ++ +A + YL CI HRD++++NVL+ +
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKI 198
Query: 106 SDFGIAKFIQPDSSNWTEFAGTYG------YVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ D +N + T ++APE + T + DV+SFGVL E+
Sbjct: 199 ADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K++ EI + + + ++V F+GF ++V E SL + + E
Sbjct: 70 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---P 126
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
++ + YLH++ ++HRD+ N+ L+ + + + DFG+A I+ D
Sbjct: 127 EARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 183
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT Y+APE+ + + D++S G + ++ GK P
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 225
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL---------SVILN 50
+++ + E+ VL+ + H NIV G CT + ++ EY G L S I +
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 51 NDTSA----------EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE 100
+ A E S V KG+A S +CI HRD++++N+LL
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCI----HRDLAARNILLTHG 204
Query: 101 YEAHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ DFG+A+ I+ DS+ + ++APE + T + DV+S+G+ E+
Sbjct: 205 RITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 159 K-GKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
G P + S I ML P P ++ IM+ C D +P R
Sbjct: 265 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP------AEMYDIMKT---CWDADPLKR 315
Query: 217 PNMQTICQLLCK 228
P + I QL+ K
Sbjct: 316 PTFKQIVQLIEK 327
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D LRE+ +L ++ H NI+K + + ++V E G L + E
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA 123
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL---DLEYEAHVSDFGIAKFIQPD 117
+R +IK + ++Y+H IVHRD+ +N+LL + + + + DFG++ Q +
Sbjct: 124 AR---IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + GT Y+APE+ KCDV+S GV+ ++ G P
Sbjct: 178 -TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLVYEYLENGSL------SVILNND- 52
D ++F E+ VL ++ H NI+ G C H + +L EY +G+L S +L D
Sbjct: 65 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 124
Query: 53 ------TSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVS 106
++A L + ++ +A + YL +HR+++++N+L+ Y A ++
Sbjct: 125 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIA 181
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
DFG+++ + L Y++ T DV+S+GVL E++
Sbjct: 182 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIV 232
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D LRE+ +L ++ H NI+K + + ++V E G L + E
Sbjct: 64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDA 123
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL---DLEYEAHVSDFGIAKFIQPD 117
+R +IK + ++Y+H IVHRD+ +N+LL + + + + DFG++ Q +
Sbjct: 124 AR---IIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + GT Y+APE+ KCDV+S GV+ ++ G P
Sbjct: 178 -TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPP 221
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 71 LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 130
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 131 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 182
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K++ EI + + + ++V F+GF ++V E SL + + E
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---P 142
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
++ + YLH++ + +HRD+ N+ L+ + + + DFG+A I+ D
Sbjct: 143 EARYFMRQTIQGVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ GT Y+APE+ + + D++S G + ++ GK P
Sbjct: 200 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 74/175 (42%), Gaps = 13/175 (7%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
LREI +L RH NI+ + YL + L + L
Sbjct: 89 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY 148
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN---WT 122
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD + T
Sbjct: 149 FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 123 EFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
E+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 61 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 120
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 121 CYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 176
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 177 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 230
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY 132
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 133 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE+ T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
LREI +L E+ H NI+ H + LV++++E L VI+ +++ L S
Sbjct: 60 LREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLV--LTPSHIKA 116
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
+ L YLH I +HRD+ N+LLD ++DFG+AK + +
Sbjct: 117 YMLMTLQGLEYLHQHWI---LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQV 173
Query: 126 GTYGYVAPELAYTMKVTA-KCDVYSFGVLALEVI 158
T Y APEL + ++ D+++ G + E++
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 135
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 136 CYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 191
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
++++ EI +L H NIVK + + +++ E+ G++ ++ E
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM---LELERPLTES 135
Query: 63 RINVI-KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA----KFIQPD 117
+I V+ K AL+YLH + I+HRD+ + N+L L+ + ++DFG++ + IQ
Sbjct: 136 QIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRR 192
Query: 118 SSNWTEFAGTYGYVAPEL-----AYTMKVTAKCDVYSFGVLALEV--IKGKH----PRDF 166
S F GT ++APE+ + K DV+S G+ +E+ I+ H P
Sbjct: 193 DS----FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 167 LSNVSSSNPNILVN---------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
L ++ S P L + L L +VD R +++ F+ +D+N R
Sbjct: 249 LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEK-NVDARWTTSQLLQHPFVTVDSNKPIR 306
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSV-ILNNDTSAEELGWSRRIN 65
E +L ++ R IV Y F T LV + G + I N D R I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
I L +LH I ++RD+ +NVLLD + +SD G+A ++ + +A
Sbjct: 294 YTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 126 GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT G++APEL + D ++ GV E+I + P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
DKK EI VL + H NI+K LV E + G L D E+ +
Sbjct: 91 DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF-----DRIVEKGYY 145
Query: 61 SRR--INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDL---EYEAHVSDFGIAKFIQ 115
S R + +K I A++YLH + I VHRD+ +N+L + ++DFG++K ++
Sbjct: 146 SERDAADAVKQILEAVAYLHENGI---VHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T GT GY APE+ + D++S G++ ++ G P
Sbjct: 203 HQVLMKT-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSV-ILNNDTSAEELGWSRRIN 65
E +L ++ R IV Y F T LV + G + I N D R I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
I L +LH I ++RD+ +NVLLD + +SD G+A ++ + +A
Sbjct: 294 YTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 126 GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT G++APEL + D ++ GV E+I + P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSV-ILNNDTSAEELGWSRRIN 65
E +L ++ R IV Y F T LV + G + I N D R I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
I L +LH I ++RD+ +NVLLD + +SD G+A ++ + +A
Sbjct: 294 YTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 126 GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT G++APEL + D ++ GV E+I + P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 135
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 136 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 191
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 65 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 124
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 125 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 180
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 181 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTS 54
D++ + RE + + RH NI+ F +R+S +L+ Y E+GSL L T
Sbjct: 43 DEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTL 102
Query: 55 AEELGWSRRINVIKGIAHA-LSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
L ++ G+AH + P I HRD S+NVL+ + ++D G+A
Sbjct: 103 EPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-V 161
Query: 114 IQPDSSNWTEFA-----GTYGYVAPELAYTMKVTAKC-------DVYSFGVLALEVIK 159
+ S++ + GT Y+APE+ ++ C D+++FG++ E+ +
Sbjct: 162 MHSQGSDYLDIGNNPRVGTKRYMAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIAR 218
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 8 EITVLTEIRHRNIVKF-YGFCTHARHSFLVYEYLENGSLSV-ILNNDTSAEELGWSRRIN 65
E +L ++ R IV Y F T LV + G + I N D R I
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLC-LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF 293
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
I L +LH I ++RD+ +NVLLD + +SD G+A ++ + +A
Sbjct: 294 YTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 126 GTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT G++APEL + D ++ GV E+I + P
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 76 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEY 135
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 136 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 191
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 69 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 128
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 129 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 184
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 185 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 21/174 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 68 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 127
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 128 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 183
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 184 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 36/239 (15%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
++++ EI +L H NIVK + + +++ E+ G++ ++ E
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM---LELERPLTES 135
Query: 63 RINVI-KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA----KFIQPD 117
+I V+ K AL+YLH + I+HRD+ + N+L L+ + ++DFG++ + IQ
Sbjct: 136 QIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR 192
Query: 118 SSNWTEFAGTYGYVAPEL-----AYTMKVTAKCDVYSFGVLALEV--IKGKH----PRDF 166
S F GT ++APE+ + K DV+S G+ +E+ I+ H P
Sbjct: 193 DS----FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV 248
Query: 167 LSNVSSSNPNILVN---------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
L ++ S P L + L L +VD R +++ F+ +D+N R
Sbjct: 249 LLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEK-NVDARWTTSQLLQHPFVTVDSNKPIR 306
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL---------SVILN 50
+++ + E+ VL+ + H NIV G CT + ++ EY G L S I +
Sbjct: 92 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 151
Query: 51 NDTSA----------EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE 100
+ A E S V KG+A S +CI HRD++++N+LL
Sbjct: 152 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCI----HRDLAARNILLTHG 204
Query: 101 YEAHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ DFG+A+ I+ DS+ + ++APE + T + DV+S+G+ E+
Sbjct: 205 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 159 K-GKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
G P + S I ML P P ++ IM+ C D +P R
Sbjct: 265 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP------AEMYDIMKT---CWDADPLKR 315
Query: 217 PNMQTICQLLCK 228
P + I QL+ K
Sbjct: 316 PTFKQIVQLIEK 327
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 28/235 (11%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
++++ EI +L H NIVK + + +++ E+ G++ ++ E
Sbjct: 79 EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVM---LELERPLTES 135
Query: 63 RINVI-KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
+I V+ K AL+YLH + I+HRD+ + N+L L+ + ++DFG++
Sbjct: 136 QIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRR 192
Query: 122 TEFAGTYGYVAPEL-----AYTMKVTAKCDVYSFGVLALEV--IKGKH----PRDFLSNV 170
F GT ++APE+ + K DV+S G+ +E+ I+ H P L +
Sbjct: 193 DXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKI 252
Query: 171 SSSNPNILVN---------EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
+ S P L + L L +VD R +++ F+ +D+N R
Sbjct: 253 AKSEPPTLAQPSRWSSNFKDFLKKCLEK-NVDARWTTSQLLQHPFVTVDSNKPIR 306
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--------- 50
D + + E+ ++ I +H+NI+ G CT +++ EY G+L L
Sbjct: 117 DLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEY 176
Query: 51 ----NDTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
+ E+L ++ +A + YL CI HRD++++NVL+ + +
Sbjct: 177 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKI 232
Query: 106 SDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+DFG+A+ I G ++APE + T + DV+SFGVL E+
Sbjct: 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL---------SVILN 50
+++ + E+ VL+ + H NIV G CT + ++ EY G L S I +
Sbjct: 69 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 128
Query: 51 NDTSA----------EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE 100
+ A E S V KG+A S +CI HRD++++N+LL
Sbjct: 129 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCI----HRDLAARNILLTHG 181
Query: 101 YEAHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ DFG+A+ I+ DS+ + ++APE + T + DV+S+G+ E+
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
Query: 159 K-GKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
G P + S I ML P P ++ IM+ C D +P R
Sbjct: 242 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP------AEMYDIMKT---CWDADPLKR 292
Query: 217 PNMQTICQLLCK 228
P + I QL+ K
Sbjct: 293 PTFKQIVQLIEK 304
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL---------SVILN 50
+++ + E+ VL+ + H NIV G CT + ++ EY G L S I +
Sbjct: 87 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 146
Query: 51 NDTSA----------EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE 100
+ A E S V KG+A S +CI HRD++++N+LL
Sbjct: 147 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCI----HRDLAARNILLTHG 199
Query: 101 YEAHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ DFG+A+ I+ DS+ + ++APE + T + DV+S+G+ E+
Sbjct: 200 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
Query: 159 K-GKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
G P + S I ML P P ++ IM+ C D +P R
Sbjct: 260 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP------AEMYDIMKT---CWDADPLKR 310
Query: 217 PNMQTICQLLCK 228
P + I QL+ K
Sbjct: 311 PTFKQIVQLIEK 322
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL---------SVILN 50
+++ + E+ VL+ + H NIV G CT + ++ EY G L S I +
Sbjct: 85 EREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS 144
Query: 51 NDTSA----------EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE 100
+ A E S V KG+A S +CI HRD++++N+LL
Sbjct: 145 KTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCI----HRDLAARNILLTHG 197
Query: 101 YEAHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ DFG+A+ I+ DS+ + ++APE + T + DV+S+G+ E+
Sbjct: 198 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
Query: 159 K-GKHPRDFLSNVSSSNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
G P + S I ML P P ++ IM+ C D +P R
Sbjct: 258 SLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP------AEMYDIMKT---CWDADPLKR 308
Query: 217 PNMQTICQLLCK 228
P + I QL+ K
Sbjct: 309 PTFKQIVQLIEK 320
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ EFL E +V+ ++V+ G + + + +V E + +G L L + E
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 61 SR-------RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
R I + IA ++YL+ VHRD++++N ++ ++ + DFG+ +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 114 IQPDSSNWTEFAG--TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNV 170
I G ++APE T D++SFGV+ E+ + P LSN
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 171 SSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
++ ++D + +V +M +C NP+ RP I LL
Sbjct: 240 Q------VLKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 286
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-------SVILNNDTSAE 56
+F E+ ++T+I++ + G T+ +++YEY+EN S+ V+ N T
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + I IK + ++ SY+H++ I HRD+ N+L+D +SDFG ++++
Sbjct: 149 PIQVIKCI--IKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD 204
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKV--TAKCDVYSFGV 152
+ GTY ++ PE AK D++S G+
Sbjct: 205 KKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGI 240
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYG--FCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
+++F REI +L + IVK+ G + LV EYL +G L L + L
Sbjct: 52 QRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLD 109
Query: 60 WSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
SR + I + YL C VHRD++++N+L++ E ++DFG+AK + D
Sbjct: 110 ASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
Query: 119 SNWT---EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
+ APE + + DV+SFGV+ E+
Sbjct: 166 DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K++ EI + + + ++V F+GF ++V E SL + + E
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---P 142
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
++ + YLH++ + +HRD+ N+ L+ + + + DFG+A I+ D
Sbjct: 143 EARYFMRQTIQGVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ + + D++S G + ++ GK P
Sbjct: 200 KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ EFL E +V+ ++V+ G + + + +V E + +G L L + E
Sbjct: 60 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 61 SR-------RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
R I + IA ++YL+ VHRD++++N ++ ++ + DFG+ +
Sbjct: 120 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 176
Query: 114 IQPDSSNWTEFAG--TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNV 170
I G ++APE T D++SFGV+ E+ + P LSN
Sbjct: 177 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
Query: 171 SSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
++ ++D + +V +M +C NP+ RP I LL
Sbjct: 237 Q------VLKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 283
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
K++ EI + + + ++V F+GF ++V E SL + + E
Sbjct: 86 KEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---P 142
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
++ + YLH++ + +HRD+ N+ L+ + + + DFG+A I+ D
Sbjct: 143 EARYFMRQTIQGVQYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK 199
Query: 122 TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ + + D++S G + ++ GK P
Sbjct: 200 KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPP 241
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 29/242 (11%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 52 --DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109
D + L I +A + +L +HRD++++N+LL + + DFG
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFG 189
Query: 110 IAK--FIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFL 167
+A+ + PD + ++APE + T + DV+SFGVL E+
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI---------F 240
Query: 168 SNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLD---NNPESRPNMQTICQ 224
S +S P + ++E RL +R + E+ LD P RP + +
Sbjct: 241 SLGASPYPGVKIDEEFXRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 299
Query: 225 LL 226
L
Sbjct: 300 HL 301
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 17/165 (10%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
KK LREI +L +++H N+V R LV+EY ++ L + E
Sbjct: 46 KKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE---- 101
Query: 62 RRINVIKGIA----HALSYLH-HDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+++K I A+++ H H+CI HRD+ +N+L+ + DFG A+ +
Sbjct: 102 ---HLVKSITWQTLQAVNFCHKHNCI----HRDVKPENILITKHSVIKLCDFGFARLLTG 154
Query: 117 DSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKG 160
S + + T Y +PE L + DV++ G + E++ G
Sbjct: 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 22/236 (9%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ EFL E +V+ ++V+ G + + + +V E + +G L L + E
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 61 SR-------RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
R I + IA ++YL+ VHRD++++N ++ ++ + DFG+ +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 114 IQPDSSNWTEFAG--TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNV 170
I G ++APE T D++SFGV+ E+ + P LSN
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 171 SSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
++ ++D + +V +M +C NP RP I LL
Sbjct: 240 Q------VLKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 286
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
F V E++ G L + +E +R I AL +LH I ++RD+
Sbjct: 100 FFVMEFVNGGDLMFHIQKSRRFDE---ARARFYAAEIISALMFLHDKGI---IYRDLKLD 153
Query: 94 NVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153
NVLLD E ++DFG+ K + F GT Y+APE+ M D ++ GVL
Sbjct: 154 NVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVL 213
Query: 154 ALEVIKGKHP 163
E++ G P
Sbjct: 214 LYEMLCGHAP 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELG 59
DK+E EI+V+ ++ H N+++ Y LV EY++ G L I++ + EL
Sbjct: 129 DKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD 188
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL---DLEYEAHVSDFGIAKFIQP 116
I +K I + ++H I+H D+ +N+L D + + + DFG+A+ +P
Sbjct: 189 ---TILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKP 241
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
F GT ++APE+ V+ D++S GV+A ++ G P
Sbjct: 242 REKLKVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 26/238 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ EFL E +V+ ++V+ G + + + +V E + +G L L + E
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 61 SR-------RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
R I + IA ++YL+ VHRD++++N ++ ++ + DFG+ +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G ++APE T D++SFGV+ E+ + P LS
Sbjct: 180 IY--ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
N ++ ++D + +V +M +C NP+ RP I LL
Sbjct: 238 NEQ------VLKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 286
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 22/236 (9%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ EFL E +V+ ++V+ G + + + +V E + +G L L + E
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 61 SR-------RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
R I + IA ++YL+ VHRD++++N ++ ++ + DFG+ +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 114 IQPDSSNWTEFAG--TYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNV 170
I + G ++APE T D++SFGV+ E+ + P LSN
Sbjct: 180 IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 171 SSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
++ ++D + +V +M +C NP+ RP I LL
Sbjct: 240 Q------VLKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 286
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 28/183 (15%)
Query: 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR- 63
L EI +LTE H N++++Y T R ++ E ++ + + S E L +
Sbjct: 74 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 64 --INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL--------DLEYEAH-----VSDF 108
I++++ IA +++LH I+HRD+ +N+L+ D + A +SDF
Sbjct: 134 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 109 GIAKFIQPDS----SNWTEFAGTYGYVAPEL---AYTMKVTAKCDVYSFGVLALEVI-KG 160
G+ K + N +GT G+ APEL + ++T D++S G + ++ KG
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 161 KHP 163
KHP
Sbjct: 251 KHP 253
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 28/183 (15%)
Query: 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR- 63
L EI +LTE H N++++Y T R ++ E ++ + + S E L +
Sbjct: 74 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 64 --INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL--------DLEYEAH-----VSDF 108
I++++ IA +++LH I+HRD+ +N+L+ D + A +SDF
Sbjct: 134 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 109 GIAKFIQPDS----SNWTEFAGTYGYVAPEL---AYTMKVTAKCDVYSFGVLALEVI-KG 160
G+ K + N +GT G+ APEL + ++T D++S G + ++ KG
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 161 KHP 163
KHP
Sbjct: 251 KHP 253
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 67/162 (41%), Gaps = 12/162 (7%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
E+ + IV YG + E LE GSL ++ E R + +
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYL 191
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAG 126
L YLH I+H D+ + NVLL + A + DFG A +QPD + G
Sbjct: 192 GQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 127 TY-----GYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
Y ++APE+ AK DV+S + L ++ G HP
Sbjct: 249 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 102/238 (42%), Gaps = 26/238 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ EFL E +V+ ++V+ G + + + +V E + +G L L + E
Sbjct: 62 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 121
Query: 61 SR-------RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
R I + IA ++YL+ VHRD++++N ++ ++ + DFG+ +
Sbjct: 122 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRD 178
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G ++APE T D++SFGV+ E+ + P LS
Sbjct: 179 IY--ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 236
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
N ++ ++D + +V +M +C NP+ RP I LL
Sbjct: 237 NEQ------VLKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 285
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+++L ++ H N++ + + L+ E + G L L E L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEE 115
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEYE-AHVS--DFGIAKFIQPD 117
+ IK I ++YLH I H D+ +N+ LLD H+ DFG+A I+ D
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ GT +VAPE+ + + D++S GV+ ++ G P ++ L+N++
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 172 S 172
S
Sbjct: 232 S 232
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 32/187 (17%)
Query: 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR- 63
L EI +LTE H N++++Y T R ++ E ++ + + S E L +
Sbjct: 56 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 64 --INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL--------DLEYEAH-----VSDF 108
I++++ IA +++LH I+HRD+ +N+L+ D + A +SDF
Sbjct: 116 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 109 GIAKFIQPDSS----NWTEFAGTYGYVAPE-------LAYTMKVTAKCDVYSFGVLALEV 157
G+ K + S N +GT G+ APE L ++T D++S G + +
Sbjct: 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 158 I-KGKHP 163
+ KGKHP
Sbjct: 233 LSKGKHP 239
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 99/246 (40%), Gaps = 34/246 (13%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 74 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 133
Query: 52 -----DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAHV 105
D + L I +A + +L CI HRD++++N+LL + +
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKI 189
Query: 106 SDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DFG+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI------ 243
Query: 164 RDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNMQ 220
S +S P + ++E RL +R + + C P RP
Sbjct: 244 ---FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFS 299
Query: 221 TICQLL 226
+ + L
Sbjct: 300 ELVEHL 305
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 99/242 (40%), Gaps = 31/242 (12%)
Query: 3 KEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN--------- 51
+ + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 77 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
Query: 52 --DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109
D + L I +A + +L +HRD++++N+LL + + DFG
Sbjct: 137 PEDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFG 193
Query: 110 IAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFL 167
+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 194 LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI---------F 244
Query: 168 SNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLD---NNPESRPNMQTICQ 224
S +S P + ++E RL +R + E+ LD P RP + +
Sbjct: 245 SLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 303
Query: 225 LL 226
L
Sbjct: 304 HL 305
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHA-----RHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH N++ + R ++V + +E ++ + S + + +
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY 148
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H + +HRD+ N+L++ + + DFG+A+ P+ +
Sbjct: 149 -----FLYQILRGLKYIHSANV---LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDH 200
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
TE T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 201 TGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+++L ++ H N++ + + L+ E + G L L E L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEE 115
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEYE-AHVS--DFGIAKFIQPD 117
+ IK I ++YLH I H D+ +N+ LLD H+ DFG+A I+ D
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ GT +VAPE+ + + D++S GV+ ++ G P ++ L+N++
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 172 S 172
S
Sbjct: 232 S 232
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 101/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 188
Query: 105 VSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 189 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 243
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLD---NNPESRPNM 219
S +S P + ++E RL +R + E+ LD P RP
Sbjct: 244 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 298
Query: 220 QTICQLL 226
+ + L
Sbjct: 299 SELVEHL 305
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+++L ++ H N++ + + L+ E + G L L E L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEE 115
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEYE-AHVS--DFGIAKFIQPD 117
+ IK I ++YLH I H D+ +N+ LLD H+ DFG+A I+ D
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ GT +VAPE+ + + D++S GV+ ++ G P ++ L+N++
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 172 S 172
S
Sbjct: 232 S 232
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 188
Query: 105 VSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 189 ICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 243
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNM 219
S +S P + ++E RL +R + + C P RP
Sbjct: 244 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 298
Query: 220 QTICQLL 226
+ + L
Sbjct: 299 SELVEHL 305
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 179
Query: 105 VSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 180 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 234
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNM 219
S +S P + ++E RL +R + + C P RP
Sbjct: 235 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 289
Query: 220 QTICQLL 226
+ + L
Sbjct: 290 SELVEHL 296
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
+ E+ + IV YG + E LE GSL ++ E R +
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALY 154
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEF 124
+ L YLH I+H D+ + NVLL + A + DFG A +QPD +
Sbjct: 155 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211
Query: 125 AGTY-----GYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
G Y ++APE+ AK D++S + L ++ G HP
Sbjct: 212 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLVY-EYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 179
Query: 105 VSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 180 ICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 234
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNM 219
S +S P + ++E RL +R + + C P RP
Sbjct: 235 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 289
Query: 220 QTICQLL 226
+ + L
Sbjct: 290 SELVEHL 296
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 29/242 (11%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 52 --DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109
D + L I +A + +L +HRD++++N+LL + + DFG
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFG 189
Query: 110 IAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFL 167
+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI---------F 240
Query: 168 SNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLD---NNPESRPNMQTICQ 224
S +S P + ++E RL +R + E+ LD P RP + +
Sbjct: 241 SLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 299
Query: 225 LL 226
L
Sbjct: 300 HL 301
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + + G C + LV + + G L + + LG
Sbjct: 64 KEILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRG--RLGSQD 120
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA +SYL +VHRD++++NVL+ ++DFG+A+ + D + +
Sbjct: 121 LLNWCMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E + T + DV+S+GV E++ G P D + + P++L
Sbjct: 178 ADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--AREIPDLLE 235
Query: 180 NEMLDPRLPPLSVDI 194
P+ P ++D+
Sbjct: 236 KGERLPQPPICTIDV 250
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
+ E+ + IV YG + E LE GSL ++ E R +
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALY 168
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEF 124
+ L YLH I+H D+ + NVLL + A + DFG A +QPD +
Sbjct: 169 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 225
Query: 125 AGTY-----GYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
G Y ++APE+ AK D++S + L ++ G HP
Sbjct: 226 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 66/162 (40%), Gaps = 12/162 (7%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
E+ + IV YG + E LE GSL ++ E R + +
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYL 172
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEFAG 126
L YLH I+H D+ + NVLL + A + DFG A +QPD G
Sbjct: 173 GQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 127 TY-----GYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
Y ++APE+ AK DV+S + L ++ G HP
Sbjct: 230 DYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 73 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 132
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 133 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
E T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFC-----THARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L RH NI+ + ++V + +E ++ S + + +
Sbjct: 74 LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY 133
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+ I L Y+H ++HRD+ N+LL+ + + DFG+A+ PD +
Sbjct: 134 -----FLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 185
Query: 121 ---WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIK------GKHPRDFLSNV 170
E T Y APE+ K T D++S G + E++ GKH D L+++
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 188
Query: 105 VSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 189 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 243
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNM 219
S +S P + ++E RL +R + + C P RP
Sbjct: 244 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 298
Query: 220 QTICQLL 226
+ + L
Sbjct: 299 SELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 225
Query: 105 VSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 226 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 280
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNM 219
S +S P + ++E RL +R + + C P RP
Sbjct: 281 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 335
Query: 220 QTICQLL 226
+ + L
Sbjct: 336 SELVEHL 342
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
+ E+ + IV YG + E LE GSL ++ E R +
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALY 170
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE-YEAHVSDFGIAKFIQPDSSNWTEF 124
+ L YLH I+H D+ + NVLL + A + DFG A +QPD +
Sbjct: 171 YLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 227
Query: 125 AGTY-----GYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
G Y ++APE+ AK D++S + L ++ G HP
Sbjct: 228 TGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLVY-EYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 179
Query: 105 VSDFGIAK--FIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ + PD + ++APE + T + DV+SFGVL E+
Sbjct: 180 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 234
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNM 219
S +S P + ++E RL +R + + C P RP
Sbjct: 235 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 289
Query: 220 QTICQLL 226
+ + L
Sbjct: 290 SELVEHL 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLV-YEYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 190
Query: 105 VSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ I PD + ++APE + T + DV+SFGVL E+
Sbjct: 191 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 245
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNM 219
S +S P + ++E RL +R + + C P RP
Sbjct: 246 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 300
Query: 220 QTICQLL 226
+ + L
Sbjct: 301 SELVEHL 307
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+++L ++ H N++ + + L+ E + G L L E L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEE 115
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEYE-AHVS--DFGIAKFIQPD 117
+ IK I ++YLH I H D+ +N+ LLD H+ DFG+A I+ D
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ GT +VAPE+ + + D++S GV+ ++ G P ++ L+N++
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 172 S 172
+
Sbjct: 232 A 232
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 DKKEFLREITVLTEIRHR-NIVKFYGFCTHARHSFLVY-EYLENGSLSVILNN------- 51
+ + + E+ +L I H N+V G CT +V E+ + G+LS L +
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 52 ------DTSAEELGWSRRINVIKGIAHALSYL-HHDCIPPIVHRDISSKNVLLDLEYEAH 104
D + L I +A + +L CI HRD++++N+LL +
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVK 179
Query: 105 VSDFGIAK--FIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKH 162
+ DFG+A+ + PD + ++APE + T + DV+SFGVL E+
Sbjct: 180 ICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI----- 234
Query: 163 PRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVISIMEVAFLCLDNNPESRPNM 219
S +S P + ++E RL +R + + C P RP
Sbjct: 235 ----FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTF 289
Query: 220 QTICQLL 226
+ + L
Sbjct: 290 SELVEHL 296
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+++L ++ H N++ + + L+ E + G L L E L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEE 115
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEYE-AHVS--DFGIAKFIQPD 117
+ IK I ++YLH I H D+ +N+ LLD H+ DFG+A I+ D
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ GT +VAPE+ + + D++S GV+ ++ G P ++ L+N++
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 172 S 172
+
Sbjct: 232 A 232
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 1 DKKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDT---SAE 56
+++ + E+ ++T++ H NIV G CT + +L++EY G L L + S +
Sbjct: 91 EREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSED 150
Query: 57 ELGWSRR--------INVIK---------GIAHALSYLHHDCIPPIVHRDISSKNVLLDL 99
E+ + + +NV+ +A + +L VHRD++++NVL+
Sbjct: 151 EIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTH 207
Query: 100 EYEAHVSDFGIAKFIQPDSSNWTEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+ DFG+A+ I DS+ ++APE + T K DV+S+G+L E+
Sbjct: 208 GKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
Query: 158 I 158
Sbjct: 268 F 268
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++E RE+++L ++ H NI+ + + L+ E + G L L E L
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL---AQKESLSEE 115
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEYE-AHVS--DFGIAKFIQPD 117
+ IK I ++YLH I H D+ +N+ LLD H+ DFG+A I+ D
Sbjct: 116 EATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVS 171
+ GT +VAPE+ + + D++S GV+ ++ G P ++ L+N++
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 172 S 172
+
Sbjct: 232 A 232
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--A 111
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 112 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYY 167
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+ + +
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 181
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
F T Y APE+ M D++S G + E++ G+
Sbjct: 182 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKXQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+ + +
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 181
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
F T Y APE+ M D++S G + E++ G+
Sbjct: 182 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--A 111
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 112 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 167
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 129
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 130 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDE 183
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 129
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 130 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDE 183
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 131
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+ +
Sbjct: 132 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADE 185
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+ + +
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG 177
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
F T Y APE+ M D++S G + E++ G+
Sbjct: 178 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 131
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+ +
Sbjct: 132 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADE 185
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 19/184 (10%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSN-WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNV 170
N + GT +VAPE+ + + D++S GV+ ++ G P ++ L+NV
Sbjct: 170 FGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANV 229
Query: 171 SSSN 174
S+ N
Sbjct: 230 SAVN 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+ V EY+ G L + +E + IA L +L I ++RD+
Sbjct: 97 YFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGLFFLQSKGI---IYRDLKLD 150
Query: 94 NVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153
NV+LD E ++DFG+ K D F GT Y+APE+ D ++FGVL
Sbjct: 151 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 210
Query: 154 ALEVIKGKHP 163
E++ G+ P
Sbjct: 211 LYEMLAGQAP 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--A 111
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 112 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 167
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 7/164 (4%)
Query: 1 DKKEFLREITVLTE-IRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG 59
++K + E VL + ++H +V + A + V +Y+ G L L + E
Sbjct: 81 EEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE-- 138
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
R IA AL YLH I V+RD+ +N+LLD + ++DFG+ K +S
Sbjct: 139 -PRARFYAAEIASALGYLHSLNI---VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ F GT Y+APE+ + D + G + E++ G P
Sbjct: 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 32/187 (17%)
Query: 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR- 63
L EI +LTE H N++++Y T R ++ E ++ + + S E L +
Sbjct: 56 LMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 64 --INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL--------DLEYEAH-----VSDF 108
I++++ IA +++LH I+HRD+ +N+L+ D + A +SDF
Sbjct: 116 NPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172
Query: 109 GIAKFIQPDS----SNWTEFAGTYGYVAPE-------LAYTMKVTAKCDVYSFGVLALEV 157
G+ K + N +GT G+ APE L ++T D++S G + +
Sbjct: 173 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYI 232
Query: 158 I-KGKHP 163
+ KGKHP
Sbjct: 233 LSKGKHP 239
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 135
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 136 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDE 189
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 190 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 25/230 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFY----GFCTHARHSFLVYEYLENGSLSVILNNDTSAE 56
+++ F E L ++H NIV+FY + LV E +G+L L +
Sbjct: 68 ERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXK 127
Query: 57 ---ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAK 112
W R+I +KG L +LH PPI+HRD+ N+ + + + D G+A
Sbjct: 128 IKVLRSWCRQI--LKG----LQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180
Query: 113 FIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSS 172
+ +S GT + APE Y K DVY+FG LE ++P N +
Sbjct: 181 LKR--ASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQ 237
Query: 173 SNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
+ + + P S D + + + E+ C+ N + R +++ +
Sbjct: 238 ------IYRRVTSGVKPASFD-KVAIPEVKEIIEGCIRQNKDERYSIKDL 280
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 38/242 (15%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++EF E + ++H N+V G T + +++ Y +G L L + ++G +
Sbjct: 73 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 132
Query: 62 RR-------------INVIKGIAHALSYL--HHDCIPPIVHRDISSKNVLLDLEYEAHVS 106
++++ IA + YL HH +VH+D++++NVL+ + +S
Sbjct: 133 DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKIS 187
Query: 107 DFGIAKFIQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GK 161
D G+ F + ++++ + G ++APE K + D++S+GV+ EV G
Sbjct: 188 DLGL--FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
Query: 162 HPRDFLSNVSSSNPNILVNEMLDPR-LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220
P SN V EM+ R + P D V ++M C + P RP +
Sbjct: 246 QPYCGYSNQD-------VVEMIRNRQVLPCPDDCPAWVYALM---IECWNEFPSRRPRFK 295
Query: 221 TI 222
I
Sbjct: 296 DI 297
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 52 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--A 108
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 109 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 164
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 131
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+ +
Sbjct: 132 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---ADE 185
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 83 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--A 139
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 140 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 195
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 196 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 106/242 (43%), Gaps = 38/242 (15%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
++EF E + ++H N+V G T + +++ Y +G L L + ++G +
Sbjct: 56 REEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 115
Query: 62 RR-------------INVIKGIAHALSYL--HHDCIPPIVHRDISSKNVLLDLEYEAHVS 106
++++ IA + YL HH +VH+D++++NVL+ + +S
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKIS 170
Query: 107 DFGIAKFIQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GK 161
D G+ F + ++++ + G ++APE K + D++S+GV+ EV G
Sbjct: 171 DLGL--FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
Query: 162 HPRDFLSNVSSSNPNILVNEMLDPR-LPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQ 220
P SN V EM+ R + P D V ++M C + P RP +
Sbjct: 229 QPYCGYSNQD-------VVEMIRNRQVLPCPDDCPAWVYALM---IECWNEFPSRRPRFK 278
Query: 221 TI 222
I
Sbjct: 279 DI 280
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYE-YLENGSLSVILNNDTSAEELGWSRRIN 65
RE+ +L ++H N++ T A E YL + LNN ++ L
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF 135
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
++ + L Y+H I +HRD+ NV ++ + E + DFG+A+ Q D T +
Sbjct: 136 LVYQLLRGLKYIHSAGI---IHRDLKPSNVAVNEDSELRILDFGLAR--QAD-EEMTGYV 189
Query: 126 GTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T Y APE+ M D++S G + E+++GK
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 60 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--A 116
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 117 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 172
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 131 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDE 184
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 117 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 169
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 126
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 127 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDE 180
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 57 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--A 113
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 114 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 169
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 170 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 42/239 (17%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHS------FLVYEYLENGSLSVILNNDTS 54
D +EFLRE + E H ++ K G +R ++ ++++G L L
Sbjct: 68 DIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRI 127
Query: 55 AEE---LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA 111
E L + + IA + YL +HRD++++N +L + V+DFG++
Sbjct: 128 GENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLS 184
Query: 112 KFIQPDSSNWTEFAGTY-----------GYVAPELAYTMKVTAKCDVYSFGVLALEVI-K 159
+ I ++G Y ++A E T DV++FGV E++ +
Sbjct: 185 RKI---------YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
Query: 160 GKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218
G+ P + N N I N + + PP ++ + ++ + C +P+ RP+
Sbjct: 236 GQTPYAGIENAEIYNYLIGGNRL---KQPPECME------EVYDLMYQCWSADPKQRPS 285
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 129
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 130 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 183
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+ V EY+ G L + +E + IA L +L I ++RD+
Sbjct: 418 YFVMEYVNGGDLMYHIQQVGRFKE---PHAVFYAAEIAIGLFFLQSKGI---IYRDLKLD 471
Query: 94 NVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153
NV+LD E ++DFG+ K D F GT Y+APE+ D ++FGVL
Sbjct: 472 NVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL 531
Query: 154 ALEVIKGKHP 163
E++ G+ P
Sbjct: 532 LYEMLAGQAP 541
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+R + I L LH + IV+RD+ +N+LLD +SD G+A + P+
Sbjct: 286 ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQT 341
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT GY+APE+ + T D ++ G L E+I G+ P
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 58 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDL--A 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 115 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 170
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 171 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 129
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 130 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 183
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 123
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 124 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 177
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 178 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 114 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 166
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 26/238 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ EFL E +V+ ++V+ G + + + +V E + +G L L + E
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 61 SR-------RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
R I + IA ++YL+ VHR+++++N ++ ++ + DFG+ +
Sbjct: 123 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G ++APE T D++SFGV+ E+ + P LS
Sbjct: 180 IY--ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
N ++ ++D + +V +M +C NP RP I LL
Sbjct: 238 NEQ------VLKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 286
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 126
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 127 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 180
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 26/238 (10%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++ EFL E +V+ ++V+ G + + + +V E + +G L L + E
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 61 SR-------RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKF 113
R I + IA ++YL+ VHR+++++N ++ ++ + DFG+ +
Sbjct: 124 GRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 114 IQPDSSNWTEFAGT----YGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLS 168
I +++ G ++APE T D++SFGV+ E+ + P LS
Sbjct: 181 IY--ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 238
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
N ++ ++D + +V +M +C NP RP I LL
Sbjct: 239 NEQ------VLKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPNMRPTFLEIVNLL 287
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 147
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 148 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 201
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 202 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 131
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 132 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 185
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 136
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 137 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 190
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 117 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 169
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 170 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 205
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 136
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 137 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 190
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 121
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 122 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 175
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 176 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 145 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 198
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 199 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 135
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 136 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 189
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 190 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKXQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 145 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 198
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 199 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 136
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 137 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 190
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 174
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 143
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 144 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 197
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 198 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 76 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 134
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 135 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 188
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 189 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 143
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 144 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 197
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 198 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 113
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 114 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 168
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 169 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 226
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 227 NVSAVN 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+R + I L LH + IV+RD+ +N+LLD +SD G+A + P+
Sbjct: 286 ARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQT 341
Query: 121 WTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT GY+APE+ + T D ++ G L E+I G+ P
Sbjct: 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 121
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 122 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 175
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 176 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 113
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 114 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 168
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 169 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 226
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 227 NVSAVN 232
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 131 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 184
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 131 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 184
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 126
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 127 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 180
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 126
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 127 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 180
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 130
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 131 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 184
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 46/256 (17%)
Query: 15 IRHRNIVKFY----GFCTHARHSFL-VYEYLENGSLSVILNNDTSAEELGWSRRINVIKG 69
+ H NI +F R +L V EY NGSL L+ TS W +
Sbjct: 64 MEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHS 119
Query: 70 IAHALSYLHHDC------IPPIVHRDISSKNVLLDLEYEAHVSDFGIA------KFIQPD 117
+ L+YLH + P I HRD++S+NVL+ + +SDFG++ + ++P
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179
Query: 118 SSNWTEFA--GTYGYVAPE-------LAYTMKVTAKCDVYSFGVLALEVIKG-------- 160
+ + GT Y+APE L + D+Y+ G++ E+
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
Query: 161 ---KHPRDFLSNVSS----SNPNILVN-EMLDPRLPPLSVDIRGKVISIMEVAFLCLDNN 212
++ F + V + + +LV+ E P+ P + V S+ E C D +
Sbjct: 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQD 299
Query: 213 PESRPNMQTICQLLCK 228
E+R Q + + +
Sbjct: 300 AEARLTAQXAEERMAE 315
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 109 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 109 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 122
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 123 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 176
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 177 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 111 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 163
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 109 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 174
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYE-YLENGSLSVILNNDTSAEELGWSRRIN 65
RE+ +L ++H N++ T A E YL + LNN + L
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF 135
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
++ + L Y+H I +HRD+ NV ++ + E + DFG+A+ Q D T +
Sbjct: 136 LVYQLLRGLKYIHSAGI---IHRDLKPSNVAVNEDSELRILDFGLAR--QAD-EEMTGYV 189
Query: 126 GTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T Y APE+ M D++S G + E+++GK
Sbjct: 190 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 22/232 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTH--ARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
++F E L H N++ G C A H L+ ++ GSL +L+ T+ +
Sbjct: 52 RDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV-VDQ 110
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRD-ISSKNVLLDLEYEAHVSDFGIAKFIQPDSS 119
S+ + +A +++LH + P++ R ++S++V++D + A +S + Q
Sbjct: 111 SQAVKFALDMARGMAFLH--TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR 168
Query: 120 NWTEFAGTYGYVAPE-LAYTMKVTAK--CDVYSFGVLALEVIKGKHPRDFLSNVSSSNPN 176
+ +VAPE L + T + D++SF VL E++ + P LSN+
Sbjct: 169 MYAP-----AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV 223
Query: 177 ILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
L E L P +PP I V +M++ C++ +P RP I +L K
Sbjct: 224 AL--EGLRPTIPP---GISPHVSKLMKI---CMNEDPAKRPKFDMIVPILEK 267
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 18/188 (9%)
Query: 2 KKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL--SVILNNDTSAEEL 58
K++ EI +L +H NI+ +H +LV E + G L ++ S E
Sbjct: 64 KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE----AHVSDFGIAKFI 114
+ V+ I + YLH + VHRD+ N+L E + DFG AK +
Sbjct: 124 SF-----VLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
Query: 115 QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSN 174
+ ++ T +VAPE+ CD++S G+L ++ G P +N S
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP---FANGPSDT 232
Query: 175 PNILVNEM 182
P ++ +
Sbjct: 233 PEEILTRI 240
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCT--HARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
K RE+ +L +RH N++ T F + YL + L E+LG
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF-YLVMPFMGTDLGKLMKHEKLGE 127
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
R ++ + L Y+H I+HRD+ N+ ++ + E + DFG+A+ Q DS
Sbjct: 128 DRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADS-- 180
Query: 121 WTEFAG---TYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
E G T Y APE+ M+ T D++S G + E+I GK
Sbjct: 181 --EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 6/154 (3%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
+REI++L E+ H NIVK +LV+E+L + + + L + +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--S 107
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
+ + LS+ H + +HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 108 YLFQLLQGLSFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 126 GTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 55 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--A 111
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+
Sbjct: 112 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXX 167
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--A 491
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 492 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYY 547
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 28/240 (11%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
K F RE+ + RH N+V F G C H ++ + +L ++ + ++ +R
Sbjct: 74 KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTR 133
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+I + I + YLH I+H+D+ SKNV D + ++DFG+ +
Sbjct: 134 QI--AQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR 187
Query: 123 EFA-----GTYGYVAPELAYTMK---------VTAKCDVYSFGVLALEVIKGKHPRDFLS 168
E G ++APE+ + + DV++ G + E+ H R++
Sbjct: 188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL----HAREW-- 241
Query: 169 NVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLLCK 228
+ ++ +M P LS GK IS ++ C E RP + +L K
Sbjct: 242 PFKTQPAEAIIWQMGTGMKPNLSQIGMGKEIS--DILLFCWAFEQEERPTFTKLMDMLEK 299
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYE-YLENGSLSVILNNDTSAEELGWSRRIN 65
RE+ +L ++H N++ T A E YL + LNN + L
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF 127
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
++ + L Y+H I +HRD+ NV ++ + E + DFG+A+ Q D T +
Sbjct: 128 LVYQLLRGLKYIHSAGI---IHRDLKPSNVAVNEDCELRILDFGLAR--QAD-EEMTGYV 181
Query: 126 GTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T Y APE+ M D++S G + E+++GK
Sbjct: 182 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++ RE+++L EI+H N++ + + L+ E + G L L E L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL---AEKESLTEE 114
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNV-LLDLEY---EAHVSDFGIAKFIQPD 117
+K I + + YLH I H D+ +N+ LLD + DFG+A I D
Sbjct: 115 EATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--D 169
Query: 118 SSNWTEFAGTYG---YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLS 168
N EF +G +VAPE+ + + D++S GV+ ++ G P ++ L+
Sbjct: 170 FGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA 227
Query: 169 NVSSSN 174
NVS+ N
Sbjct: 228 NVSAVN 233
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN +++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKSQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+ +
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 18/188 (9%)
Query: 2 KKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL--SVILNNDTSAEEL 58
K++ EI +L +H NI+ +H +LV E + G L ++ S E
Sbjct: 64 KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE----AHVSDFGIAKFI 114
+ V+ I + YLH + VHRD+ N+L E + DFG AK +
Sbjct: 124 SF-----VLHTIGKTVEYLHSQGV---VHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
Query: 115 QPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSN 174
+ ++ T +VAPE+ CD++S G+L ++ G P +N S
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP---FANGPSDT 232
Query: 175 PNILVNEM 182
P ++ +
Sbjct: 233 PEEILTRI 240
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 9/159 (5%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWS 61
+++FL+E + + H +IVK G T +++ E G L L + +L +
Sbjct: 435 REKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDL--A 491
Query: 62 RRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNW 121
I ++ AL+YL VHRDI+++NVL+ + DFG++++++ DS+ +
Sbjct: 492 SLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYY 547
Query: 122 TEFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVI 158
G ++APE + T+ DV+ FGV E++
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + D+G+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
L+E+ +L ++ H NI++ FLV++ ++ G L L + E + +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 117
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ + AL L+ IVHRD+ +N+LLD + ++DFG + + P E
Sbjct: 118 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 170
Query: 125 AGTYGYVAPEL----------AYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ Y +V D++S GV+ ++ G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 147
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+ +
Sbjct: 148 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG 204
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
+ T Y APE+ M D++S G + E++ G+
Sbjct: 205 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN +L
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCAKLTD 120
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 121 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 174
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 18/227 (7%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+F+RE+ + + HRN+++ YG +V E GSL L LG R
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT- 122
V +A + YL +HRD++++N+LL + DFG+ + + + ++
Sbjct: 116 YAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 123 --EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
+ + APE T + D + FGV E+ G+ P L+ +
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 230
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
E L PR DI ++ C + PE RP + L
Sbjct: 231 GERL-PRPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFL 269
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 24/167 (14%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWSRRIN 65
REI +RH NIV+F H +V EY G L I N +E+
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ 123
Query: 66 VIKGI--AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAH--VSDFGIAK----FIQPD 117
+I G+ AHA+ + HRD+ +N LLD ++DFG +K QP
Sbjct: 124 LISGVSYAHAMQ---------VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPK 174
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHP 163
S+ GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 175 SA-----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHSF----LVYEYLENGSLSVILNNDTS 54
+++ + RE + + RH NI+ F ++ LV +Y E+GSL LN T
Sbjct: 64 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 123
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
E I + A L++LH + + P I HRD+ SKN+L+ ++D G
Sbjct: 124 TVE----GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 179
Query: 110 IAKFIQPDSSNWT------EFAGTYGYVAPEL---AYTMK---VTAKCDVYSFGVLALEV 157
+A ++ DS+ T GT Y+APE+ + MK + D+Y+ G++ E+
Sbjct: 180 LA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
Query: 158 IK 159
+
Sbjct: 238 AR 239
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHSF----LVYEYLENGSLSVILNNDTS 54
+++ + RE + + RH NI+ F ++ LV +Y E+GSL LN T
Sbjct: 77 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 136
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
E I + A L++LH + + P I HRD+ SKN+L+ ++D G
Sbjct: 137 TVE----GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 192
Query: 110 IAKFIQPDSSNWT------EFAGTYGYVAPEL---AYTMK---VTAKCDVYSFGVLALEV 157
+A ++ DS+ T GT Y+APE+ + MK + D+Y+ G++ E+
Sbjct: 193 LA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
Query: 158 IK 159
+
Sbjct: 251 AR 252
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 18/227 (7%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+F+RE+ + + HRN+++ YG +V E GSL L LG R
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT- 122
V +A + YL +HRD++++N+LL + DFG+ + + + ++
Sbjct: 116 YAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 170
Query: 123 --EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
+ + APE T + D + FGV E+ G+ P L+ +
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 230
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
E L PR DI ++ C + PE RP + L
Sbjct: 231 GERL-PRPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFL 269
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEE-----LGW 60
+REI++L E+ H NIVK +LV+E+L S+ + D SA L
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIK 109
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
S +++G+A S+ ++HRD+ +N+L++ E ++DFG+A+
Sbjct: 110 SYLFQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 121 WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
+ T Y APE+ K + D++S G + E++
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHSF----LVYEYLENGSLSVILNNDTS 54
+++ + RE + + RH NI+ F ++ LV +Y E+GSL LN T
Sbjct: 44 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 103
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
E I + A L++LH + + P I HRD+ SKN+L+ ++D G
Sbjct: 104 TVE----GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 159
Query: 110 IAKFIQPDSSNWT------EFAGTYGYVAPEL---AYTMK---VTAKCDVYSFGVLALEV 157
+A ++ DS+ T GT Y+APE+ + MK + D+Y+ G++ E+
Sbjct: 160 LA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
Query: 158 IK 159
+
Sbjct: 218 AR 219
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + + L S
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL 112
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 113 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E++ + + + + L S
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL 108
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +T
Sbjct: 109 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 27/181 (14%)
Query: 2 KKEFLREITVLTEIRHRNIVKFYGFCTHAR-------HSFLVYEYLE-----NGSLSVIL 49
+++ +RE+ L ++ H IV+++ S VY Y++ +L +
Sbjct: 47 REKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106
Query: 50 NNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109
N + EE S +++ IA A+ +LH + +HRD+ N+ ++ V DFG
Sbjct: 107 NGRCTIEERERSVCLHIFLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFG 163
Query: 110 IAKFIQPDSSNWTEFA------------GTYGYVAPELAYTMKVTAKCDVYSFGVLALEV 157
+ + D T GT Y++PE + + K D++S G++ E+
Sbjct: 164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
Query: 158 I 158
+
Sbjct: 224 L 224
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHSF----LVYEYLENGSLSVILNNDTS 54
+++ + RE + + RH NI+ F ++ LV +Y E+GSL LN T
Sbjct: 38 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 97
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
E I + A L++LH + + P I HRD+ SKN+L+ ++D G
Sbjct: 98 TVE----GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153
Query: 110 IAKFIQPDSSNWT------EFAGTYGYVAPEL---AYTMK---VTAKCDVYSFGVLALEV 157
+A ++ DS+ T GT Y+APE+ + MK + D+Y+ G++ E+
Sbjct: 154 LA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
Query: 158 IK 159
+
Sbjct: 212 AR 213
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEE-----LGW 60
+REI++L E+ H NIVK +LV+E+L S+ + D SA L
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK 109
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
S +++G+A S+ ++HRD+ +N+L++ E ++DFG+A+
Sbjct: 110 SYLFQLLQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 121 WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
+ T Y APE+ K + D++S G + E++
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 18/227 (7%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+F+RE+ + + HRN+++ YG +V E GSL L LG R
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT- 122
V +A + YL +HRD++++N+LL + DFG+ + + + ++
Sbjct: 120 YAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 123 --EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
+ + APE T + D + FGV E+ G+ P L+ +
Sbjct: 175 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 234
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
E L PR D I V C + PE RP + L
Sbjct: 235 GERL-PRPEDCPQD-------IYNVMVQCWAHKPEDRPTFVALRDFL 273
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHSF----LVYEYLENGSLSVILNNDTS 54
+++ + RE + + RH NI+ F ++ LV +Y E+GSL LN T
Sbjct: 39 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 98
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
E I + A L++LH + + P I HRD+ SKN+L+ ++D G
Sbjct: 99 TVE----GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 154
Query: 110 IAKFIQPDSSNWT------EFAGTYGYVAPEL---AYTMK---VTAKCDVYSFGVLALEV 157
+A ++ DS+ T GT Y+APE+ + MK + D+Y+ G++ E+
Sbjct: 155 LA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
Query: 158 IK 159
+
Sbjct: 213 AR 214
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 29/182 (15%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHSF----LVYEYLENGSLSVILNNDTS 54
+++ + RE + + RH NI+ F ++ LV +Y E+GSL LN T
Sbjct: 41 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 100
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
E I + A L++LH + + P I HRD+ SKN+L+ ++D G
Sbjct: 101 TVE----GMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 156
Query: 110 IAKFIQPDSSNWT------EFAGTYGYVAPEL---AYTMK---VTAKCDVYSFGVLALEV 157
+A ++ DS+ T GT Y+APE+ + MK + D+Y+ G++ E+
Sbjct: 157 LA--VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
Query: 158 IK 159
+
Sbjct: 215 AR 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 18/227 (7%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+F+RE+ + + HRN+++ YG +V E GSL L LG R
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT- 122
V +A + YL +HRD++++N+LL + DFG+ + + + ++
Sbjct: 126 YAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 180
Query: 123 --EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
+ + APE T + D + FGV E+ G+ P L+ +
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 240
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
E L PR DI ++ C + PE RP + L
Sbjct: 241 GERL-PRPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFL 279
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINV 66
+EI++L RHRNI+ + +++E++ L + +TSA EL ++
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIFEFI--SGLDIFERINTSAFELNEREIVSY 107
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVS--DFGIAKFIQPDSSNWTEF 124
+ + AL +LH I H DI +N++ + + +FG A+ ++P N+
Sbjct: 108 VHQVCEALQFLHSHNIG---HFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-GDNFRLL 163
Query: 125 AGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEM 182
Y APE+ V+ D++S G L ++ G +P FL+ +N I+ N M
Sbjct: 164 FTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINP--FLAE---TNQQIIENIM 216
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 10/164 (6%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+F+RE+ + + HRN+++ YG +V E GSL L LG R
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT- 122
V +A + YL +HRD++++N+LL + DFG+ + + + ++
Sbjct: 120 YAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM 174
Query: 123 --EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
+ + APE T + D + FGV E+ G+ P
Sbjct: 175 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEE-----LGW 60
+REI++L E+ H NIVK +LV+E+L S+ + D SA L
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK 107
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
S +++G+A S+ ++HRD+ +N+L++ E ++DFG+A+
Sbjct: 108 SYLFQLLQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 160
Query: 121 WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
+ T Y APE+ K + D++S G + E++
Sbjct: 161 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
L+E+ +L ++ H NI++ FLV++ ++ G L L + E + +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ + AL L+ IVHRD+ +N+LLD + ++DFG + + P E
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREV 183
Query: 125 AGTYGYVAPEL----------AYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ Y +V D++S GV+ ++ G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVI--LNNDTSAEELGWSRR 63
LREI +L E++H+NIV+ + + LV+E+ + N D E + S
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-SFL 107
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
++KG+ S ++HRD+ +N+L++ E ++DFG+A+ ++
Sbjct: 108 FQLLKGLGFCHSR-------NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA 160
Query: 124 FAGTYGYVAPELAYTMKV-TAKCDVYSFGVLALEVIKGKHP 163
T Y P++ + K+ + D++S G + E+ P
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEE-----LGW 60
+REI++L E+ H NIVK +LV+E+L S+ + D SA L
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIK 108
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
S +++G+A S+ ++HRD+ +N+L++ E ++DFG+A+
Sbjct: 109 SYLFQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 121 WTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
+ T Y APE+ K + D++S G + E++
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 118
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 119 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 233
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 234 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 269
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 59 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 115
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 116 LLNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 173 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 230
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 231 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 266
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 113 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 109 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 161
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 113 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 112 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 119
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 120 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 177 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 234
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 235 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 270
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 112 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 114 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 166
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 167 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 109 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 161
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 162 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
F ++++++ H+++V YG C + LV E+++ GSL L + + + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA--------HVSDFGIAKFIQP 116
V K +A A+ +L + ++H ++ +KN+LL E + +SD GI+ + P
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 117 DSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKG 160
+V PE K + D +SFG E+ G
Sbjct: 174 KDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 118
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 119 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 233
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D V IM ++ + +SRP + +
Sbjct: 234 KGERLPQPPICTID----VYMIMRKCWMI---DADSRPKFREL 269
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 56 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 112
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 113 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 170 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 227
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 228 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 263
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
DK+ +EI ++ +RH +V + ++YE++ G L + ++ + ++
Sbjct: 197 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN--KMSE 254
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY--EAHVSDFGIAKFIQPDS 118
+ ++ + L ++H + VH D+ +N++ + E + DFG+ + P
Sbjct: 255 DEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311
Query: 119 SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP------RDFLSNVSS 172
S GT + APE+A V D++S GVL+ ++ G P + L NV S
Sbjct: 312 SVKVT-TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 370
Query: 173 SNPNI 177
+ N+
Sbjct: 371 CDWNM 375
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 120
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 121 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 235
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 236 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 271
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 32 HSFLVYEYLENGSLSVILNN--DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRD 89
H +LV +Y G L +L+ D E++ ++ I ++ LH+ VHRD
Sbjct: 148 HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DSIHQLHY------VHRD 200
Query: 90 ISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA-GTYGYVAPELAYTM-----KVTA 143
I NVLLD+ ++DFG + D + + A GT Y++PE+ M K
Sbjct: 201 IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 260
Query: 144 KCDVYSFGVLALEVIKGKHP 163
+CD +S GV E++ G+ P
Sbjct: 261 ECDWWSLGVCMYEMLYGETP 280
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 2 KKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELG 59
K++ EI +L +H NI+ ++ ++V E ++ G L IL +E
Sbjct: 59 KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREA 118
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY----EAHVSDFGIAKFIQ 115
+ V+ I + YLH + VHRD+ N+L E + DFG AK ++
Sbjct: 119 SA----VLFTITKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
++ T +VAPE+ A CD++S GVL ++ G P
Sbjct: 172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 111 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 121
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 122 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 236
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 237 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 272
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 125
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 126 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 240
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 241 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 276
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 111 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 63 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVRE--HKDNIGSQY 119
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 120 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 177 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 234
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 235 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 118
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 119 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 233
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 234 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 269
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 122
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 123 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 179
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 180 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 237
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 238 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 273
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 112 FQLLQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 165 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 68 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 124
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 125 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 181
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 182 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 239
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 240 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 275
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 14/185 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
DK+ +EI ++ +RH +V + ++YE++ G L + ++ + ++
Sbjct: 91 DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN--KMSE 148
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY--EAHVSDFGIAKFIQPDS 118
+ ++ + L ++H + VH D+ +N++ + E + DFG+ + P
Sbjct: 149 DEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 205
Query: 119 SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLA------LEVIKGKHPRDFLSNVSS 172
S GT + APE+A V D++S GVL+ L G++ + L NV S
Sbjct: 206 SVKVT-TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 264
Query: 173 SNPNI 177
+ N+
Sbjct: 265 CDWNM 269
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 72 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 128
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 129 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 185
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 186 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 243
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D V IM ++ + +SRP + +
Sbjct: 244 KGERLPQPPICTID----VYMIMRKCWMI---DADSRPKFREL 279
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 118
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 119 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 233
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 234 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 269
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 125
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 126 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 240
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 241 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 276
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 125
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 126 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 240
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 241 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 276
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 121
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 122 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 236
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 237 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 272
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 100/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 121
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 122 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 236
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D V IM ++ + +SRP + +
Sbjct: 237 KGERLPQPPICTID----VYMIMRKCWMI---DADSRPKFREL 272
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 65 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 121
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 122 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 179 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 236
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 237 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 272
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 32 HSFLVYEYLENGSLSVILNN--DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRD 89
H +LV +Y G L +L+ D E++ ++ I ++ LH+ VHRD
Sbjct: 164 HLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-DSIHQLHY------VHRD 216
Query: 90 ISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA-GTYGYVAPELAYTM-----KVTA 143
I NVLLD+ ++DFG + D + + A GT Y++PE+ M K
Sbjct: 217 IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP 276
Query: 144 KCDVYSFGVLALEVIKGKHP 163
+CD +S GV E++ G+ P
Sbjct: 277 ECDWWSLGVCMYEMLYGETP 296
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVRE--HKDNIGSQY 118
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 119 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 233
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 234 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 269
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL 109
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 110 FQLLQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 163 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 120
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 121 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 235
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 236 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 271
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 34 FLVYEYLENGSLSVILNN--DTSAEELGWSRRINVIKGI--AHALSYLHHDCIPPIVHRD 89
+LV +Y G L +L+ D EE+ ++ I H L Y VHRD
Sbjct: 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---------VHRD 200
Query: 90 ISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA-GTYGYVAPELAYTM-----KVTA 143
I N+L+D+ ++DFG + D + + A GT Y++PE+ M +
Sbjct: 201 IKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGP 260
Query: 144 KCDVYSFGVLALEVIKGKHP 163
+CD +S GV E++ G+ P
Sbjct: 261 ECDWWSLGVCMYEMLYGETP 280
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+L + + + L S
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 111 FQLLQGLAFCHSHR-------VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
+K++F+ E ++ + H +IVK G ++++ E G L L + ++ L
Sbjct: 52 NKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS--LKV 108
Query: 61 SRRINVIKGIAHALSYLHH-DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ-PDS 118
+ I A++YL +C VHRDI+ +N+L+ + DFG++++I+ D
Sbjct: 109 LTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
Query: 119 SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+ +++PE + T DV+ F V E++ GK P +L N I
Sbjct: 165 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV----I 220
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM-QTICQL 225
V E D RLP D+ V+ + C D +P RP + +C L
Sbjct: 221 GVLEKGD-RLP--KPDLCPPVLYTLMTR--CWDYDPSDRPRFTELVCSL 264
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 96 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 152
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 153 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 209
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 210 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 267
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 268 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 303
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
+K++F+ E ++ + H +IVK G ++++ E G L L + ++ L
Sbjct: 56 NKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS--LKV 112
Query: 61 SRRINVIKGIAHALSYLHH-DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ-PDS 118
+ I A++YL +C VHRDI+ +N+L+ + DFG++++I+ D
Sbjct: 113 LTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168
Query: 119 SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+ +++PE + T DV+ F V E++ GK P +L N I
Sbjct: 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV----I 224
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM-QTICQL 225
V E D RLP D+ V+ + C D +P RP + +C L
Sbjct: 225 GVLEKGD-RLP--KPDLCPPVLYTLMTR--CWDYDPSDRPRFTELVCSL 268
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E L + +LS ++ + E
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQMELDHE 126
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + ++ GI H LH I +HRD+ N+++ + + DFG+A+
Sbjct: 127 RMSY-LLYQMLVGIKH----LHSAGI---IHRDLKPSNIVVKSDATLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S GV+ E+IKG
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 20/229 (8%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
+K++F+ E ++ + H +IVK G ++++ E G L L + ++ L
Sbjct: 68 NKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS--LKV 124
Query: 61 SRRINVIKGIAHALSYLHH-DCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ-PDS 118
+ I A++YL +C VHRDI+ +N+L+ + DFG++++I+ D
Sbjct: 125 LTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
Query: 119 SNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNI 177
+ +++PE + T DV+ F V E++ GK P +L N I
Sbjct: 181 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV----I 236
Query: 178 LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM-QTICQL 225
V E D RLP D+ V+ + C D +P RP + +C L
Sbjct: 237 GVLEKGD-RLP--KPDLCPPVLYTLMTR--CWDYDPSDRPRFTELVCSL 280
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 87 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 143
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG+AK + + +
Sbjct: 144 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 200
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 201 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 258
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 259 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 294
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + FG+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
RE+ L + + ++NI++ F +LV+E L+ GS+ + E SR
Sbjct: 58 FREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR-- 115
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSS-- 119
V++ +A AL +LH I HRD+ +N+L + + + DF + ++ ++S
Sbjct: 116 -VVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCT 171
Query: 120 -----NWTEFAGTYGYVAPEL--AYTMKVT---AKCDVYSFGVLALEVIKGKHP 163
T G+ Y+APE+ +T + T +CD++S GV+ ++ G P
Sbjct: 172 PITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 8 EITVLTEIRHRN--IVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
E VL IR + Y F T + L+ +Y+ G L L S E +
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETK-LHLILDYINGGELFTHL----SQRERFTEHEVQ 162
Query: 66 VIKG-IAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK-FIQPDSSNWTE 123
+ G I AL +LH I++RDI +N+LLD ++DFG++K F+ ++ +
Sbjct: 163 IYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Query: 124 FAGTYGYVAPELAYTMKVT--AKCDVYSFGVLALEVIKGKHP 163
F GT Y+AP++ D +S GVL E++ G P
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E L + +LS ++ + E
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQMELDHE 126
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + ++ GI H LH I +HRD+ N+++ + + DFG+A+
Sbjct: 127 RMSY-LLYQMLVGIKH----LHSAGI---IHRDLKPSNIVVKSDATLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S GV+ E+IKG
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
F ++++++ H+++V YG C + LV E+++ GSL L + + + W ++
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KL 116
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA--------HVSDFGIAKFIQP 116
V K +A A+ +L + ++H ++ +KN+LL E + +SD GI+ + P
Sbjct: 117 EVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 117 DSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKG 160
+V PE K + D +SFG E+ G
Sbjct: 174 KDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + D G+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+ +
Sbjct: 145 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG 201
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T Y APE+ M D++S G + E++ G+
Sbjct: 202 ---XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+F+RE+ + + HRN+++ YG +V E GSL L LG R
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT- 122
V +A + YL +HRD++++N+LL + DFG+ + + + +
Sbjct: 116 YAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 170
Query: 123 --EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
+ + APE T + D + FGV E+ G+ P
Sbjct: 171 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + D G+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 22/212 (10%)
Query: 21 VKFYGFCTHARHSFLVYEYLENG----SLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76
V FYG ++ E ++ VI T E++ ++++K + H S
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELA 136
L ++HRD+ NVL++ + + DFGI+ ++ DS T AG Y+APE
Sbjct: 173 LS------VIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERI 225
Query: 137 ----YTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSV 192
+ K D++S G+ +E+ + P D S P + ++++ P L
Sbjct: 226 NPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----SWGTPFQQLKQVVEEPSPQLPA 280
Query: 193 DIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
D ++ CL N + RP + Q
Sbjct: 281 DKFS--AEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW--SRR 63
+REI++L E+ H NIVK +LV+E+++ + + + L S
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL 112
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
+++G+A S+ ++HRD+ +N+L++ E ++DFG+A+ +
Sbjct: 113 FQLLQGLAFCHSHR-------VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 124 FAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVI 158
T Y APE+ K + D++S G + E++
Sbjct: 166 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 183
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ + WT GT Y+APE+ +
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAPEIILSKGYNKAV 240
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 241 DWWALGVLIYEMAAGYPP 258
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + D G+A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 10/164 (6%)
Query: 4 EFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRR 63
+F+RE+ + + HRN+++ YG +V E GSL L LG R
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT- 122
V +A + YL +HRD++++N+LL + DFG+ + + + +
Sbjct: 126 YAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVM 180
Query: 123 --EFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHP 163
+ + APE T + D + FGV E+ G+ P
Sbjct: 181 QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T A S + YL + LNN ++L
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFTPAT-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 153
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DFG+A+
Sbjct: 154 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDE 207
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 208 MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 43/245 (17%)
Query: 1 DKKEFLREITVLTEIRHRN---IVKFYGFCTHARHSFLVYEYLENG-------SLSVILN 50
++K+ L ++ V+ +R + IV+FYG ++ E + SV+
Sbjct: 63 EQKQLLMDLDVV--MRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVL-- 118
Query: 51 NDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGI 110
+D EE+ + +K + H L I+HRDI N+LLD + DFGI
Sbjct: 119 DDVIPEEILGKITLATVKALNHLKENLK------IIHRDIKPSNILLDRSGNIKLCDFGI 172
Query: 111 AKFIQPDSSNWTEFAGTYGYVAPEL----AYTMKVTAKCDVYSFGVLALEVIKGKHPR-- 164
+ + DS T AG Y+APE A + DV+S G+ E+ G+ P
Sbjct: 173 SGQLV-DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231
Query: 165 -----DFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNM 219
D L+ V +P L N + R S + LCL + RP
Sbjct: 232 WNSVFDQLTQVVKGDPPQLSNS-----------EEREFSPSFINFVNLCLTKDESKRPKY 280
Query: 220 QTICQ 224
+ + +
Sbjct: 281 KELLK 285
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWSRRIN 65
REI +RH NIV+F H +V EY G L I N +E+
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ 123
Query: 66 VIKGIA--HALSYLHHDCIPPIVHRDISSKNVLLDLEYEAH--VSDFGIAK----FIQPD 117
+I G++ HA+ + HRD+ +N LLD + DFG +K QP
Sbjct: 124 LISGVSYCHAMQ---------VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 174
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHP 163
S+ GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 175 ST-----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYE--YLENGSLSVILNNDTSAEELGW 60
K RE+ +L ++H N++ T AR S + YL + LNN ++L
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPAR-SLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
+I I L Y+H I+HRD+ N+ ++ + E + DF +A+
Sbjct: 125 DHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDE 178
Query: 121 WTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
T + T Y APE+ M D++S G + E++ G+
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 88/212 (41%), Gaps = 22/212 (10%)
Query: 21 VKFYGFCTHARHSFLVYEYLENG----SLSVILNNDTSAEELGWSRRINVIKGIAHALSY 76
V FYG ++ E ++ VI T E++ ++++K + H S
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 77 LHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELA 136
L ++HRD+ NVL++ + + DFGI+ ++ D + + AG Y+APE
Sbjct: 129 LS------VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPERI 181
Query: 137 ----YTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSV 192
+ K D++S G+ +E+ + P D S P + ++++ P L
Sbjct: 182 NPELNQKGYSVKSDIWSLGITMIELAILRFPYD-----SWGTPFQQLKQVVEEPSPQLPA 236
Query: 193 DIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
D ++ CL N + RP + Q
Sbjct: 237 DKFSA--EFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL--DLEYEAHVSDFGIAK-FIQPDSSNW 121
N+++ I AL YLH+ I HRDI +N L + +E + DFG++K F + ++ +
Sbjct: 172 NIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 122 ---TEFAGTYGYVAPELAYTMKVT--AKCDVYSFGVLALEVIKGKHP 163
T AGT +VAPE+ T + KCD +S GVL ++ G P
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWSRRIN 65
REI +RH NIV+F H +V EY G L I N +E+
Sbjct: 63 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ 122
Query: 66 VIKGIA--HALSYLHHDCIPPIVHRDISSKNVLLDLEYEAH--VSDFGIAK----FIQPD 117
+I G++ HA+ + HRD+ +N LLD + DFG +K QP
Sbjct: 123 LISGVSYCHAMQ---------VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 173
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHP 163
S+ GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 174 ST-----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWSRRIN 65
REI +RH NIV+F H ++ EY G L I N +E+
Sbjct: 65 REIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQ 124
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAH--VSDFGIAK----FIQPDSS 119
++ G+++ S I HRD+ +N LLD + DFG +K QP S+
Sbjct: 125 LLSGVSYCHSM-------QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177
Query: 120 NWTEFAGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHP 163
GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 178 -----VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 66 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 122
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG AK + + +
Sbjct: 123 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 179
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 180 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 237
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 238 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 273
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W AGT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVI--LNNDTSAEELGWSRR 63
LREI +L E++H+NIV+ + + LV+E+ + N D E + S
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-SFL 107
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTE 123
++KG+ S ++HRD+ +N+L++ E +++FG+A+ ++
Sbjct: 108 FQLLKGLGFCHSR-------NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160
Query: 124 FAGTYGYVAPELAYTMKV-TAKCDVYSFGVLALEVIKGKHP 163
T Y P++ + K+ + D++S G + E+ P
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 6 LREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
L+E+ +L ++ H NI++ FLV++ ++ G L L + E + +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 65 NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEF 124
+ + AL L+ IVHRD+ +N+LLD + ++DFG + + P
Sbjct: 131 RALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSV 183
Query: 125 AGTYGYVAPEL----------AYTMKVTAKCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ Y +V D++S GV+ ++ G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 120
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG AK + + +
Sbjct: 121 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 235
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D V IM ++ + +SRP + +
Sbjct: 236 KGERLPQPPICTID----VYMIMRKCWMI---DADSRPKFREL 271
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVRE--HKDNIGSQY 120
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG AK + + +
Sbjct: 121 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 235
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 236 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 271
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 148
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ WT GT Y+APE+ +
Sbjct: 149 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKAV 205
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 206 DWWALGVLIYEMAAGYPP 223
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 118
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG AK + + +
Sbjct: 119 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 175
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 233
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 234 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 269
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 26/231 (11%)
Query: 2 KKEFLREITVLTEIRH-RNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
+ E L EI VL + ++ + + L+ EY G + + + AE +
Sbjct: 72 RAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSE 130
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY---EAHVSDFGIAKFIQPD 117
+ I +IK I + YLH + IVH D+ +N+LL Y + + DFG+++ I
Sbjct: 131 NDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI-GH 186
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNI 177
+ E GT Y+APE+ +T D+++ G++A ++ P V N
Sbjct: 187 ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF-----VGEDNQET 241
Query: 178 LVNEMLDPRLPPLSVDIRGKV---ISIMEVAFL--CLDNNPESRPNMQTIC 223
+N + ++VD + +S + F+ L NPE RP + IC
Sbjct: 242 YLN------ISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAE-IC 285
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 32 HSFLVYEYLENGSLSVILNNDTS----AEELGWSRRINVIKGIAHALSYLH-HDCIPPIV 86
SF + E+ SLS + + S E + I+ +A + +L CI
Sbjct: 166 ESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCI---- 221
Query: 87 HRDISSKNVLLDLEYEAHVSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTAK 144
HRD++++N+LL + DFG+A+ I PD + ++APE + + K
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTK 281
Query: 145 CDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEV 204
DV+S+GVL E+ S S P + ++E RL + +R S E+
Sbjct: 282 SDVWSYGVLLWEI---------FSLGGSPYPGVQMDEDFCSRLRE-GMRMRAPEYSTPEI 331
Query: 205 AFLCLD---NNPESRPNMQTICQLL 226
+ LD +P+ RP + + L
Sbjct: 332 YQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 39/187 (20%)
Query: 1 DKKEFLREITVLTEI--RHRNIVKFYGFCTHARHS----FLVYEYLENGSLSVILNNDTS 54
++ + RE + + RH NI+ F S +L+ +Y ENGSL L + T
Sbjct: 72 EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTL 131
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCI-----PPIVHRDISSKNVLLDLEYEAHVSDFG 109
+ + + G+ H LH + P I HRD+ SKN+L+ ++D G
Sbjct: 132 DAKSMLKLAYSSVSGLCH----LHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 187
Query: 110 IA-KFIQPDSSNWTEF-----AGTYGYVAPEL-----------AYTMKVTAKCDVYSFGV 152
+A KFI +N + GT Y+ PE+ +Y M D+YSFG+
Sbjct: 188 LAVKFI--SDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIM-----ADMYSFGL 240
Query: 153 LALEVIK 159
+ EV +
Sbjct: 241 ILWEVAR 247
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 10/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELG 59
DK EI+++ ++ H ++ + L+ E+L G L I D E
Sbjct: 91 DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE-- 148
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVS--DFGIAKFIQPD 117
+ IN ++ L ++H I VH DI +N++ + + + V DFG+A + PD
Sbjct: 149 -AEVINYMRQACEGLKHMHEHSI---VHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
A T + APE+ V D+++ GVL ++ G P
Sbjct: 205 EIVKVTTA-TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 64 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 120
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG AK + + +
Sbjct: 121 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 235
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D V IM ++ + +SRP + +
Sbjct: 236 KGERLPQPPICTID----VYMIMRKCWMI---DADSRPKFREL 271
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 97/258 (37%), Gaps = 77/258 (29%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR-------------------HSFLVYEYLENG 43
+EFL E + + H N+++ G C H++L+Y LE G
Sbjct: 81 EEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETG 140
Query: 44 SLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA 103
+ L + + IA + YL + +HRD++++N +L +
Sbjct: 141 PKHIPLQT-----------LLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186
Query: 104 HVSDFGIAKFIQPDSSNWTEFAGTY-----------GYVAPELAYTMKVTAKCDVYSFGV 152
V+DFG++K I ++G Y ++A E T+K DV++FGV
Sbjct: 187 CVADFGLSKKI---------YSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGV 237
Query: 153 LALEV-IKGKHPRDFLSNVSSSNPNILVNEMLDPRL-------PPLSVDIRGKVISIMEV 204
E+ +G P P + +EM D L P +D + E+
Sbjct: 238 TMWEIATRGMTP----------YPGVQNHEMYDYLLHGHRLKQPEDCLD------ELYEI 281
Query: 205 AFLCLDNNPESRPNMQTI 222
+ C +P RP +
Sbjct: 282 MYSCWRTDPLDRPTFSVL 299
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 18/223 (8%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
KE L E V+ + + ++ + G C + L+ + + G L + + +G
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQY 125
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+N IA ++YL +VHRD++++NVL+ ++DFG AK + + +
Sbjct: 126 LLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 182
Query: 123 EFAGTY--GYVAPELAYTMKVTAKCDVYSFGVLALEVIK-GKHPRDFLSNVSSSNPNILV 179
G ++A E T + DV+S+GV E++ G P D + +S +IL
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE 240
Query: 180 NEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
P+ P ++D+ ++ C + +SRP + +
Sbjct: 241 KGERLPQPPICTIDVYMIMVK-------CWMIDADSRPKFREL 276
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 13/168 (7%)
Query: 2 KKEFLREITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELG 59
K++ EI +L +H NI+ ++ ++V E + G L IL +E
Sbjct: 59 KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREA 118
Query: 60 WSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY----EAHVSDFGIAKFIQ 115
+ V+ I + YLH + VHRD+ N+L E + DFG AK ++
Sbjct: 119 SA----VLFTITKTVEYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
++ T +VAPE+ A CD++S GVL + G P
Sbjct: 172 AENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ WT GT Y+APE+ +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 98/241 (40%), Gaps = 43/241 (17%)
Query: 7 REITVLTEIRHRNIVKFYGFC---------THARHS--------FLVYEYLENGSLSVIL 49
RE+ L ++ H NIV + G C T +++S F+ E+ + G+L +
Sbjct: 53 REVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI 111
Query: 50 NNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFG 109
E+L + + + I + Y+H +++RD+ N+ L + + DFG
Sbjct: 112 EK-RRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFG 167
Query: 110 IAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSN 169
+ ++ D GT Y++PE + + D+Y+ G++ E++ H D
Sbjct: 168 LVTSLKNDGKR-XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFE 223
Query: 170 VSSSNPNI---LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTICQLL 226
S ++ +++++ D + L + L PE RPN I + L
Sbjct: 224 TSKFFTDLRDGIISDIFDKKEKTLLQKL--------------LSKKPEDRPNTSEILRTL 269
Query: 227 C 227
Sbjct: 270 T 270
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 24/168 (14%)
Query: 6 LREITVLTEIRHRNIVKFYGF-----CTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L +H NI+ + + +++ E ++ VI S + + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-- 118
I A+ LH + +HRD+ N+L++ + V DFG+A+ I +
Sbjct: 117 -----FIYQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 119 --------SNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEV 157
S TE+ T Y APE+ T K + DV+S G + E+
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 25/196 (12%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
F+ E+ + G+L + E+L + + + I + Y+H ++HRD+
Sbjct: 110 FIQMEFCDKGTLEQWIEK-RRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPS 165
Query: 94 NVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVL 153
N+ L + + DFG+ ++ D T GT Y++PE + + D+Y+ G++
Sbjct: 166 NIFLVDTKQVKIGDFGLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 154 ALEVIKGKHPRDFLSNVSSSNPNI---LVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLD 210
E++ H D S ++ +++++ D + L + L
Sbjct: 225 LAELL---HVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKL--------------LS 267
Query: 211 NNPESRPNMQTICQLL 226
PE RPN I + L
Sbjct: 268 KKPEDRPNTSEILRTL 283
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 99/230 (43%), Gaps = 28/230 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH-SFLVYEYLENGSLSVILNN---DTSAEEL 58
+ FLRE ++ + H N++ G ++ Y+ +G L + + + + ++L
Sbjct: 67 EAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL 126
Query: 59 GWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
I+ +A + YL VHRD++++N +LD + V+DFG+A+ I D
Sbjct: 127 -----ISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL-DR 177
Query: 119 SNWTEFAGTYG-----YVAPELAYTMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVSS 172
++ + + A E T + T K DV+SFGVL E++ +G P +
Sbjct: 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL 237
Query: 173 SNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
++ + P P S+ +V C + +P RP + +
Sbjct: 238 THFLAQGRRLPQPEYCP---------DSLYQVMQQCWEADPAVRPTFRVL 278
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ +L ++H N++ T A +LV +++ L I+ + S E
Sbjct: 86 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEE 144
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
++ + ++ + L Y+H + VHRD+ N+ ++ + E + DFG+A+
Sbjct: 145 KIQY-----LVYQMLKGLKYIHSAGV---VHRDLKPGNLAVNEDCELKILDFGLARHA-- 194
Query: 117 DSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK---HPRDFLSNVSS 172
+ T + T Y APE+ + M D++S G + E++ GK +D+L ++
Sbjct: 195 -DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ 253
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 23 FYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82
FY F R+ ++V EY+ G L +++N E+ W+R + AL +H
Sbjct: 135 FYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAIHS--- 186
Query: 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA-GTYGYVAPELAYTMKV 141
+HRD+ N+LLD ++DFG + + + A GT Y++PE+ +
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 246
Query: 142 TA----KCDVYSFGVLALEVIKGKHP 163
+CD +S GV E++ G P
Sbjct: 247 DGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 23 FYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82
FY F R+ ++V EY+ G L +++N E+ W+R + AL +H
Sbjct: 140 FYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAIHS--- 191
Query: 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA-GTYGYVAPELAYTMKV 141
+HRD+ N+LLD ++DFG + + + A GT Y++PE+ +
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 142 TA----KCDVYSFGVLALEVIKGKHP 163
+CD +S GV E++ G P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 23 FYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCI 82
FY F R+ ++V EY+ G L +++N E+ W+R + AL +H
Sbjct: 140 FYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK--WARFYTA--EVVLALDAIHS--- 191
Query: 83 PPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA-GTYGYVAPELAYTMKV 141
+HRD+ N+LLD ++DFG + + + A GT Y++PE+ +
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 251
Query: 142 TA----KCDVYSFGVLALEVIKGKHP 163
+CD +S GV E++ G P
Sbjct: 252 DGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTA 143
+HRD++++N+LL + + DFG+A+ I PD + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 144 KCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVIS 200
+ DV+SFGVL E+ S +S P + ++E RL +R
Sbjct: 273 QSDVWSFGVLLWEI---------FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPE 322
Query: 201 IMEVAFLCLDNNPESRPNMQTICQLL 226
+ + C P RP + + L
Sbjct: 323 MYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 6 LREITVLTEIRHRNIVKFYGF-----CTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L +H NI+ + + +++ E ++ VI S + + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-- 118
I A+ LH + +HRD+ N+L++ + V DFG+A+ I +
Sbjct: 117 -----FIYQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 119 --------SNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEV 157
S EF T Y APE+ T K + DV+S G + E+
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E L + +LS ++ + E
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQMELDHE 126
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + ++ GI H LH I +HRD+ N+++ + + DFG+A+
Sbjct: 127 RMSY-LLYQMLVGIKH----LHSAGI---IHRDLKPSNIVVKSDATLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S G + E+IKG
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 6 LREITVLTEIR---HRNIVKFYGFCTHARHS-----FLVYEYLENGSLSVILNNDTSAEE 57
+RE+ +L + H N+V+ C +R LV+E+++ L L+
Sbjct: 59 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK-APPPG 116
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD 117
L ++++ L +LH +CI VHRD+ +N+L+ ++DFG+A+ I
Sbjct: 117 LPAETIKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLAR-IYSY 172
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
T T Y APE+ D++S G + E+ + K
Sbjct: 173 QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 3 KEFLREITVLTEIRHRNIVKFY--------------GFCTHARHSFLVYEYLENGSLSVI 48
K LREI ++ + H NIVK + G T ++V EY+E L+ +
Sbjct: 53 KHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANV 111
Query: 49 LNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLE-YEAHVSD 107
L EE +++G L Y+H ++HRD+ N+ ++ E + D
Sbjct: 112 LEQGPLLEEHARLFMYQLLRG----LKYIHS---ANVLHRDLKPANLFINTEDLVLKIGD 164
Query: 108 FGIAKFIQPDSS---NWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK 161
FG+A+ + P S + +E T Y +P L + T D+++ G + E++ GK
Sbjct: 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 22/178 (12%)
Query: 2 KKEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
+ RE+ +L + + HRN+++ F +LV+E + GS+ ++ EL
Sbjct: 54 RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQ-- 115
S V++ +A AL +LH+ I HRD+ +N+L + + + DFG+ I+
Sbjct: 114 SV---VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLN 167
Query: 116 ----PDSS-NWTEFAGTYGYVAPELAYTMKVTA-----KCDVYSFGVLALEVIKGKHP 163
P S+ G+ Y+APE+ A +CD++S GV+ ++ G P
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAK--FIQPDSSNWTEFAGTYGYVAPELAYTMKVTA 143
+HRD++++N+LL + + DFG+A+ + PD + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 144 KCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRG---KVIS 200
+ DV+SFGVL E+ S +S P + ++E RL +R
Sbjct: 275 QSDVWSFGVLLWEI---------FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPE 324
Query: 201 IMEVAFLCLDNNPESRPNMQTICQLL 226
+ + C P RP + + L
Sbjct: 325 MYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTA 143
+HRD++++N+LL + + DFG+A+ I PD + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 144 KCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIME 203
+ DV+SFGVL E+ S +S P + ++E RL +R + E
Sbjct: 282 QSDVWSFGVLLWEI---------FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPE 331
Query: 204 VAFLCLD---NNPESRPNMQTICQLL 226
+ LD P RP + + L
Sbjct: 332 MYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L Y + +N +L +++ E RRI I YLH +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L Y + +N +L +++ E RRI I YLH +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFI--QPDSSNWTEFAGTYGYVAPELAYTMKVTA 143
+HRD++++N+LL + + DFG+A+ I PD + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 144 KCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIME 203
+ DV+SFGVL E+ S +S P + ++E RL +R + E
Sbjct: 280 QSDVWSFGVLLWEI---------FSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPE 329
Query: 204 VAFLCLD---NNPESRPNMQTICQLL 226
+ LD P RP + + L
Sbjct: 330 MYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 37/241 (15%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHAR----HSFLVYEYLENGSLSVIL------N 50
D++E RE + H NI++ +C R ++L+ + + G+L +
Sbjct: 69 DREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG 128
Query: 51 NDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGI 110
N + +++ W ++ GI L +H HRD+ N+LL E + + D G
Sbjct: 129 NFLTEDQILW-----LLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGS 180
Query: 111 --AKFIQPDSS-------NWTEFAGTYGYVAPELAYTMK---VTAKCDVYSFGVLALEVI 158
I + S +W T Y APEL + + DV+S G + ++
Sbjct: 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
Query: 159 KGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPN 218
G+ P D + S + N++ P+ P S + + S+M V +P RP+
Sbjct: 241 FGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTV-------DPHQRPH 293
Query: 219 M 219
+
Sbjct: 294 I 294
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L Y + +N +L +++ E RRI I YLH +
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 24/213 (11%)
Query: 21 VKFYGFCTHARHSFLVYEYLENGSL-----SVILNNDTSAEELGWSRRINVIKGIAHALS 75
V FYG ++ E L + SL VI T E++ ++++K + H S
Sbjct: 96 VTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 154
Query: 76 YLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPEL 135
L ++HRD+ NVL++ + DFGI+ ++ D + + AG Y APE
Sbjct: 155 KLS------VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID-AGCKPYXAPER 207
Query: 136 A----YTMKVTAKCDVYSFGVLALEVIKGKHPRDFLSNVSSSNPNILVNEMLDPRLPPLS 191
+ K D++S G+ +E+ + P D S P + ++++ P L
Sbjct: 208 INPELNQKGYSVKSDIWSLGITXIELAILRFPYD-----SWGTPFQQLKQVVEEPSPQLP 262
Query: 192 VDIRGKVISIMEVAFLCLDNNPESRPNMQTICQ 224
D ++ CL N + RP + Q
Sbjct: 263 ADKFSA--EFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E L + +LS ++ + E
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQMELDHE 126
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + ++ GI H LH I +HRD+ N+++ + + DFG+A+
Sbjct: 127 RMSY-LLYQMLCGIKH----LHSAGI---IHRDLKPSNIVVKSDATLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S G + E+IKG
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 23/169 (13%)
Query: 7 REITVLTEIRHRNIVKFYG--FCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
+EI +L +RH+N+++ + + ++V EY G ++ D+ E +R
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML---DSVPE-----KRF 106
Query: 65 NVIKGIAH------ALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS 118
V + + L YLH I VH+DI N+LL +S G+A+ + P +
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQGI---VHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 119 SNWT--EFAGTYGYVAPELAYTMKVTA--KCDVYSFGVLALEVIKGKHP 163
++ T G+ + PE+A + + K D++S GV + G +P
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI +L ++ H I+K F A ++V E +E G L + + L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---FDKVVGNKRLKEATCKLYF 120
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH + I+HRD+ +NVLL + E ++DFG +K + ++S
Sbjct: 121 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTL 176
Query: 125 AGTYGYVAPELAYTMKVTA---KCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI +L ++ H I+K F A ++V E +E G L + + L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---FDKVVGNKRLKEATCKLYF 120
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH + I+HRD+ +NVLL + E ++DFG +K + ++S
Sbjct: 121 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTL 176
Query: 125 AGTYGYVAPELAYTMKVTA---KCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI +L ++ H I+K F A ++V E +E G L + + L +
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---FDKVVGNKRLKEATCKLYF 119
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH + I+HRD+ +NVLL + E ++DFG +K + ++S
Sbjct: 120 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTL 175
Query: 125 AGTYGYVAPELAYTMKVTA---KCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L ++L E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI +L ++ H I+K F A ++V E +E G L + + L +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---FDKVVGNKRLKEATCKLYF 120
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH + I+HRD+ +NVLL + E ++DFG +K + ++S
Sbjct: 121 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTL 176
Query: 125 AGTYGYVAPELAYTMKVTA---KCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 157
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 214
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 215 DWWALGVLIYEMAAGYPP 232
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI +L ++ H I+K F A ++V E +E G L + + L +
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---FDKVVGNKRLKEATCKLYF 126
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH + I+HRD+ +NVLL + E ++DFG +K + ++S
Sbjct: 127 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTL 182
Query: 125 AGTYGYVAPELAYTMKVTA---KCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ +L + H+NI+ T + +LV E L + +L +++ + E
Sbjct: 68 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHMELDHE 126
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + ++ GI H LH I+HRD+ N+++ + + DFG+A+
Sbjct: 127 RMSY-LLYQMLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---T 175
Query: 117 DSSNW--TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
+N+ T + T Y APE+ M A D++S G + E++KG
Sbjct: 176 ACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E L + +LS ++ + E
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQMELDHE 126
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + ++ GI H LH I +HRD+ N+++ + + DFG+A+
Sbjct: 127 RMSY-LLYQMLCGIKH----LHSAGI---IHRDLKPSNIVVKSDATLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S G + E+IKG
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG+AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 149
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 206
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 207 DWWALGVLIYEMAAGYPP 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 6 LREITVLTEIRHRNIVKFYGF-----CTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
LREI +L +H NI+ + + +++ E ++ VI S + + +
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY 116
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDS-- 118
I A+ LH + +HRD+ N+L++ + V DFG+A+ I +
Sbjct: 117 -----FIYQTLRAVKVLHGSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 119 --------SNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEV 157
S TE T Y APE+ T K + DV+S G + E+
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI +L ++ H I+K F A ++V E +E G L + + L +
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---FDKVVGNKRLKEATCKLYF 245
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH + I+HRD+ +NVLL + E ++DFG +K I ++S
Sbjct: 246 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTL 301
Query: 125 AGTYGYVAPELAYTMKVTA---KCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 155
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 212
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 213 DWWALGVLIYEMAAGYPP 230
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 155
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 156 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 212
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 213 DWWALGVLIYEMAAGYPP 230
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 183
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 240
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 241 DWWALGVLIYEMAAGYPP 258
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRINVI 67
EI +L ++ H I+K F A ++V E +E G L + + L +
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL---FDKVVGNKRLKEATCKLYF 259
Query: 68 KGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQPDSSNWTEF 124
+ A+ YLH + I+HRD+ +NVLL + E ++DFG +K I ++S
Sbjct: 260 YQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-ILGETSLMRTL 315
Query: 125 AGTYGYVAPELAYTMKVTA---KCDVYSFGVLALEVIKGKHP 163
GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E L + +LS ++ + E
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVME-LMDANLSQVIQMELDHE 126
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + ++ GI H LH I +HRD+ N+++ + + DFG+A+
Sbjct: 127 RMSY-LLYQMLCGIKH----LHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S G + E+IKG
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 82/180 (45%), Gaps = 22/180 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ +L ++H N++ T A +LV +++ L I+ S E
Sbjct: 68 KRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEE 126
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
++ + ++ + L Y+H + VHRD+ N+ ++ + E + DFG+A+
Sbjct: 127 KIQY-----LVYQMLKGLKYIHSAGV---VHRDLKPGNLAVNEDCELKILDFGLARHA-- 176
Query: 117 DSSNWTEFAGTYGYVAPELAYT-MKVTAKCDVYSFGVLALEVIKGK---HPRDFLSNVSS 172
+ T + T Y APE+ + M D++S G + E++ GK +D+L ++
Sbjct: 177 -DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQ 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG+AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 89 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 144
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S TE T YVAPE+ K CD++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 204 GVIMYILLCGYPP--FYSN 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 71/167 (42%), Gaps = 24/167 (14%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWSRRIN 65
REI +RH NIV+F H +V EY G L I N +E+
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ 123
Query: 66 VIKGIA--HALSYLHHDCIPPIVHRDISSKNVLLDLEYEAH--VSDFGIAK----FIQPD 117
+I G++ HA+ + HRD+ +N LLD + FG +K QP
Sbjct: 124 LISGVSYCHAMQ---------VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK 174
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHP 163
S+ GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 175 ST-----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 183
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 240
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 241 DWWALGVLIYEMAAGYPP 258
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ +L + H+NI+ T + +LV E L + +L +++ + E
Sbjct: 66 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME-LMDANLCQVIHMELDHE 124
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
+ + ++ GI H LH I+HRD+ N+++ + + DFG+A+
Sbjct: 125 RMSY-LLYQMLCGIKH----LHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---T 173
Query: 117 DSSNW--TEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S+N+ T + T Y APE+ M D++S G + E++KG
Sbjct: 174 ASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF---------YGFCTHARHSFLVYEYLENGSLSVILNN 51
+ K LRE+ +L +H NI+ YG + ++V + +E+ +I
Sbjct: 97 NAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLMESDLHQII--- 150
Query: 52 DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA 111
S++ L + + L Y+H + +HRD+ N+L++ E + DFG+A
Sbjct: 151 -HSSQPLTLEHVRYFLYQLLRGLKYMHSAQV---IHRDLKPSNLLVNENCELKIGDFGMA 206
Query: 112 KFI--QPDSSNW--TEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGKH 162
+ + P + TE+ T Y APEL ++ + T D++S G + E++ +
Sbjct: 207 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%), Gaps = 7/157 (4%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
+RE+++L +++H NIV + + LV+EYL+ + D +
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYL---DDCGNIINMHNVKL 104
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFA 125
+ + L+Y H ++HRD+ +N+L++ E ++DFG+A+ + +
Sbjct: 105 FLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161
Query: 126 GTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGK 161
T Y P+ L + + + D++ G + E+ G+
Sbjct: 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 12/168 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D F E ++ +V+ + ++ ++V EY+ G L +++N E+ W
Sbjct: 118 DSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK--W 175
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA-KFIQPDSS 119
++ + AL +H ++HRD+ N+LLD ++DFG K +
Sbjct: 176 AKFYTA--EVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 120 NWTEFAGTYGYVAPELAYTMKVTA----KCDVYSFGVLALEVIKGKHP 163
+ GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 231 HCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSRRIN 65
+RE+++L E++HRNI++ H L++EY EN + N + + S
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQ 140
Query: 66 VIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAH-----VSDFGIAKFIQPDSSN 120
+I G+ S C+ HRD+ +N+LL + + + DFG+A+
Sbjct: 141 LINGVNFCHS---RRCL----HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 121 WTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVI 158
+T T Y PE L + + D++S + E++
Sbjct: 194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 6 LREITVLTEIR---HRNIVKFYGFCTHARHS-----FLVYEYLENGSLSVILNNDTSAEE 57
+RE+ +L + H N+V+ C +R LV+E+++ L L+
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK-APPPG 108
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD 117
L ++++ L +LH +CI VHRD+ +N+L+ ++DFG+A+ I
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLAR-IYSY 164
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
T Y APE+ D++S G + E+ + K
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 21/171 (12%)
Query: 5 FLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILN--NDTSAEELGWSR 62
F E VL R I + + + +LV EY G L +L+ + E+
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY 167
Query: 63 RINVIKGI--AHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSN 120
++ I H L Y VHRDI N+LLD ++DFG ++ D +
Sbjct: 168 LAEIVMAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Query: 121 WTEFA-GTYGYVAPELAYTMKVTA-------KCDVYSFGVLALEVIKGKHP 163
+ A GT Y++PE+ + +CD ++ GV A E+ G+ P
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL ++ G P
Sbjct: 220 DWWALGVLIYQMAAGYPP 237
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 70 IAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYG 129
I AL YL ++HRD+ N+LLD + + DFGI+ + D + AG
Sbjct: 133 IVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCAA 189
Query: 130 YVAPELAYTMKVTA-----KCDVYSFGVLALEVIKGKHP-----RDF--LSNVSSSNPNI 177
Y+APE T + DV+S G+ +E+ G+ P DF L+ V P +
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL 249
Query: 178 LVNEM 182
L M
Sbjct: 250 LPGHM 254
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E ++ VI
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I+HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S G + E+IKG
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + +VY +Y+ V + +
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRA 115
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 173 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 163
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 164 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 220
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 221 DWWALGVLIYEMAAGYPP 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 24/176 (13%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF---------YGFCTHARHSFLVYEYLENGSLSVILNN 51
+ K LRE+ +L +H NI+ YG + ++V + +E+ +I
Sbjct: 96 NAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG---EFKSVYVVLDLMESDLHQII--- 149
Query: 52 DTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIA 111
S++ L + + L Y+H + +HRD+ N+L++ E + DFG+A
Sbjct: 150 -HSSQPLTLEHVRYFLYQLLRGLKYMHSAQV---IHRDLKPSNLLVNENCELKIGDFGMA 205
Query: 112 KFI--QPDSSNW--TEFAGTYGYVAPELAYTM-KVTAKCDVYSFGVLALEVIKGKH 162
+ + P + TE+ T Y APEL ++ + T D++S G + E++ +
Sbjct: 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+++D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIIISKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 95 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 150
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 209
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 210 GVIMYILLCGYPP--FYSN 226
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E ++ VI
Sbjct: 69 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QM 122
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I+HRD+ N+++ + + DFG+A+
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 178
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S G + E+IKG
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 96 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 151
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 210
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 211 GVIMYILLCGYPP--FYSN 227
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I+HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 97 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 152
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 211
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 212 GVIMYILLCGYPP--FYSN 228
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QM 114
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 115 ELDHERMSYLLYQMLXGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLAR-TAG 170
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 6 LREITVLTEIR---HRNIVKFYGFCTHARHS-----FLVYEYLENGSLSVILNNDTSAEE 57
+RE+ +L + H N+V+ C +R LV+E+++ L L+
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK-APPPG 108
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD 117
L ++++ L +LH +CI VHRD+ +N+L+ ++DFG+A+
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQ 165
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
+ + T Y APE+ D++S G + E+ + K
Sbjct: 166 MALFPVVV-TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 135 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 190
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 249
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 250 GVIMYILLCGYPP--FYSN 266
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 89 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 144
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 203
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 204 GVIMYILLCGYPP--FYSN 220
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 14/164 (8%)
Query: 6 LREITVLTEIR---HRNIVKFYGFCTHARHS-----FLVYEYLENGSLSVILNNDTSAEE 57
+RE+ +L + H N+V+ C +R LV+E+++ L L+
Sbjct: 51 VREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDK-APPPG 108
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPD 117
L ++++ L +LH +CI VHRD+ +N+L+ ++DFG+A+ I
Sbjct: 109 LPAETIKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLAR-IYSY 164
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
T Y APE+ D++S G + E+ + K
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E ++ VI
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S T + T Y APE+ M D++S G + E+IKG
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 6 LREITVLTEIR---HRNIVKFYGFCTHARHS-----FLVYEYLENGSLSVILNNDTSAEE 57
+RE+ VL + H N+V+ + CT +R LV+E+++ L+ L+ E
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDK---VPE 114
Query: 58 LGWSRRI--NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115
G +++ + L +LH +VHRD+ +N+L+ + ++DFG+A+ I
Sbjct: 115 PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IY 170
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
T T Y APE+ D++S G + E+ + K
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 91 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 146
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 205
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 206 GVIMYILLCGYPP--FYSN 222
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 90 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 145
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 204
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 205 GVIMYILLCGYPP--FYSN 221
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 105 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 160
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 219
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 220 GVIMYILLCGYPP--FYSN 236
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 91 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 146
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 205
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 206 GVIMYILLCGYPP--FYSN 222
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + ++K I A+ YLH I HRD+ +
Sbjct: 141 LIVMECLDGGELFSRIQ-DRGDQAFTEREASEIMKSIGEAIQYLHSINI---AHRDVKPE 196
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 255
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 256 GVIMYILLCGYPP--FYSN 272
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E ++ VI
Sbjct: 70 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QM 123
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 124 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 179
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
S F T Y APE+ M D++S G + E+IKG
Sbjct: 180 TSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 6 LREITVLTEIR---HRNIVKFYGFCTHARHS-----FLVYEYLENGSLSVILNNDTSAEE 57
+RE+ VL + H N+V+ + CT +R LV+E+++ L+ L+ E
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDK---VPE 114
Query: 58 LGWSRRI--NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115
G +++ + L +LH +VHRD+ +N+L+ + ++DFG+A+ I
Sbjct: 115 PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IY 170
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
T T Y APE+ D++S G + E+ + K
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Query: 6 LREITVLTEIR---HRNIVKFYGFCTHARHS-----FLVYEYLENGSLSVILNNDTSAEE 57
+RE+ VL + H N+V+ + CT +R LV+E+++ L+ L+ E
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDK---VPE 114
Query: 58 LGWSRRI--NVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQ 115
G +++ + L +LH +VHRD+ +N+L+ + ++DFG+A+ I
Sbjct: 115 PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IY 170
Query: 116 PDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
T T Y APE+ D++S G + E+ + K
Sbjct: 171 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 2 KKEFLREITVLTEIR-HRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
+ RE+ +L + + HRN+++ F +LV+E + GS+ ++ EL
Sbjct: 54 RSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEA 113
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYE---AHVSDFGIAKFIQ-- 115
S V++ +A AL +LH+ I HRD+ +N+L + + + DF + I+
Sbjct: 114 SV---VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167
Query: 116 ----PDSS-NWTEFAGTYGYVAPELAYTMKVTA-----KCDVYSFGVLALEVIKGKHP 163
P S+ G+ Y+APE+ A +CD++S GV+ ++ G P
Sbjct: 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 1 DKKEFLREITVLTEIRHRNIVK----FYGFCTHARHSFL--VYEYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++H N+V FY FL V EY+ +
Sbjct: 75 DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRASRH 130
Query: 55 AEELGWSRRINVIK----GIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFG 109
+L + + +IK + +L+Y+H I HRDI +N+LLD + DFG
Sbjct: 131 YAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI---CHRDIKPQNLLLDPPSGVLKLIDFG 187
Query: 110 IAKFIQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
AK + N + Y Y APEL + T D++S G + E+++G+
Sbjct: 188 SAKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D F +EI ++ + H NI++ Y +LV E G L + + E
Sbjct: 49 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA 108
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL---DLEYEAHVSDFGIAKFIQPD 117
+R ++K + A++Y H + HRD+ +N L + + DFG+A +P
Sbjct: 109 AR---IMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T+ GT YV+P++ + +CD +S GV+ ++ G P
Sbjct: 163 KMMRTK-VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 206
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 24/167 (14%)
Query: 7 REITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSL-SVILNNDTSAEELGWSRRIN 65
REI +RH NIV+F H +V EY G L I N +E+
Sbjct: 64 REIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQ 123
Query: 66 VIKGIA--HALSYLHHDCIPPIVHRDISSKNVLLDLEYEAH--VSDFGIAK----FIQPD 117
+I G++ HA+ + HRD+ +N LLD + FG +K QP
Sbjct: 124 LISGVSYCHAMQ---------VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPK 174
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAK-CDVYSFGVLALEVIKGKHP 163
+ GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 175 DT-----VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 70 IAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYG 129
I YLH +++RD+ +N+L+D + V+DFG AK ++ W GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPE 203
Query: 130 YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
Y+APE+ + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Query: 70 IAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYG 129
I YLH +++RD+ +N+L+D + V+DFG AK ++ W GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPE 203
Query: 130 YVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
Y+APE+ + D ++ GVL E+ G P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 11/166 (6%)
Query: 1 DKKEFLREITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGW 60
D F +EI ++ + H NI++ Y +LV E G L + + E
Sbjct: 66 DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDA 125
Query: 61 SRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLL---DLEYEAHVSDFGIAKFIQPD 117
+R ++K + A++Y H + HRD+ +N L + + DFG+A +P
Sbjct: 126 AR---IMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 179
Query: 118 SSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
T+ GT YV+P++ + +CD +S GV+ ++ G P
Sbjct: 180 KMMRTK-VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPP 223
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT Y+AP + +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPAIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 57 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 116
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 117 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 173
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 174 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 32/232 (13%)
Query: 7 REITVLTEI-RHRNIVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELG--WSRR 63
RE+ +L E H N++++ FCT F +Y+ + L ++
Sbjct: 66 REVQLLRESDEHPNVIRY--FCTEKDRQF---QYIAIELCAATLQEYVEQKDFAHLGLEP 120
Query: 64 INVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDL-----EYEAHVSDFGIAKFIQPDS 118
I +++ L++LH IVHRD+ N+L+ + + +A +SDFG+ K +
Sbjct: 121 ITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 119 SNWTEFA---GTYGYVAPELAY---TMKVTAKCDVYSFGVLALEVI-KGKHPRDFLSNVS 171
+++ + GT G++APE+ T D++S G + VI +G HP
Sbjct: 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHP---FGKSL 234
Query: 172 SSNPNILVNEM-LDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESRPNMQTI 222
NIL+ LD P D+ + + +A +P+ RP+ + +
Sbjct: 235 QRQANILLGACSLDCLHPEKHEDVIARELIEKMIAM-----DPQKRPSAKHV 281
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 159
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I+HRD+ N+++ + + DFG+A+
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 215
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 120
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 121 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 176
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 177 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHARH------SFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + ++V E ++ VI
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKG 160
E Y Y APE+ M D++S G + E+IKG
Sbjct: 179 SFMMTPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 173 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 115
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I+HRD+ N+++ + + DFG+A+
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 171
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 115
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 116 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 171
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 114
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 115 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 170
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 122
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I+HRD+ N+++ + + DFG+A+
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 178
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 173 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 121
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I+HRD+ N+++ + + DFG+A+
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 177
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 122
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I +HRD+ N+++ + + DFG+A+
Sbjct: 123 ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 178
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 60 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 119
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 120 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 176
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 177 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 64 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 123
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 124 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 180
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 181 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 75 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 134
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 135 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 191
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 192 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 25/188 (13%)
Query: 7 REITVLTEIRHRNIVKFYG-FCTHA-RHSFLVYEYLENGSLSVILNNDTSAEELGWSRRI 64
REI +L E++H N++ F +HA R +L+++Y E+ +I + S + +
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN---KKPV 123
Query: 65 NVIKGIAHALSY-----LHHDCIPPIVHRDISSKNVLLDLE----YEAHVSDFGIAKF-- 113
+ +G+ +L Y +H+ ++HRD+ N+L+ E ++D G A+
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN 183
Query: 114 --IQPDSSNWTEFAGTYGYVAPELAYTMK-VTAKCDVYSFGVLALEVIKGK---HPRDFL 167
++P ++ T+ Y APEL + T D+++ G + E++ + H R
Sbjct: 184 SPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ-- 240
Query: 168 SNVSSSNP 175
++ +SNP
Sbjct: 241 EDIKTSNP 248
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 127
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 128 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 185 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVK----FYGFCTHARHSFL--VYEYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ FY +L V +Y+ V + +
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 127
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 128 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 184
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 185 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 3 KEFLREITVLTEIRHRNIVKFYGFCTHAR------HSFLVYEYLENGSLSVILNNDTSAE 56
K RE+ ++ + H+NI+ T + +LV E ++ VI
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QM 159
Query: 57 ELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQP 116
EL R ++ + + +LH I+HRD+ N+++ + + DFG+A+
Sbjct: 160 ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAG 215
Query: 117 DSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSFGVLALEVIKGK 161
S T + T Y APE+ M D++S G + E+++ K
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 5 FLREITVLTEIRHRN--IVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ EI L +++ + I++ Y + ++ ++V E N L+ L S + W R
Sbjct: 57 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP--WER 113
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + K + A+ +H I VH D+ N L+ ++ + DFGIA +QPD+++
Sbjct: 114 K-SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVV 168
Query: 123 EFA--GTYGYVAPELAYTMKVTAK-----------CDVYSFGVLALEVIKGKHPRDFLSN 169
+ + GT Y+ PE M + + DV+S G + + GK P + N
Sbjct: 169 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 228
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
S ++ ++DP DI K + +V CL +P+ R
Sbjct: 229 QISK-----LHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 268
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 156 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 209 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 115
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 116 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 172
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 173 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVK----FYGFCTHARHSFL--VYEYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ FY +L V +Y+ V + +
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 149
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 150 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 207 LVRGEPNVSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 34 FLVYEYLENGSLSVILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSK 93
+V E L+ G L + D + + K I A+ YLH I HRD+ +
Sbjct: 135 LIVXECLDGGELFSRIQ-DRGDQAFTEREASEIXKSIGEAIQYLHSINI---AHRDVKPE 190
Query: 94 NVLLDLEYEAHV---SDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKCDVYSF 150
N+L + + +DFG AK +S T Y YVAPE+ K CD +S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXWSL 249
Query: 151 GVLALEVIKGKHPRDFLSN 169
GV+ ++ G P F SN
Sbjct: 250 GVIXYILLCGYPP--FYSN 266
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 35 LVYEYLENGSLSVILNNDTSAEELGWSRRINVIK---------GIAHALSYLHHDCIPPI 85
L + + +N +L +++ E RRI I YLH +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDL 162
Query: 86 VHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAGTYGYVAPELAYTMKVTAKC 145
++RD+ +N+L+D + V+DFG AK ++ W GT +APE+ +
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEALAPEIILSKGYNKAV 219
Query: 146 DVYSFGVLALEVIKGKHP 163
D ++ GVL E+ G P
Sbjct: 220 DWWALGVLIYEMAAGYPP 237
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 69 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 128
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 129 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 185
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 186 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 5 FLREITVLTEIRHRN--IVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ EI L +++ + I++ Y + ++ ++V E N L+ L S + W R
Sbjct: 53 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP--WER 109
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + K + A+ +H I VH D+ N L+ ++ + DFGIA +QPD+++
Sbjct: 110 K-SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVV 164
Query: 123 EFA--GTYGYVAPELAYTMKVTAK-----------CDVYSFGVLALEVIKGKHPRDFLSN 169
+ + GT Y+ PE M + + DV+S G + + GK P + N
Sbjct: 165 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 224
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
S ++ ++DP DI K + +V CL +P+ R
Sbjct: 225 QISK-----LHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 264
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSF--------LVYEYLENGSLSVILNNDTSAEE 57
LREI +L ++H N+V C + LV+++ E+ L+ +L+N
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFT 123
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112
L +R V++ + + L Y+H + I+HRD+ + NVL+ + ++DFG+A+
Sbjct: 124 LSEIKR--VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSF--------LVYEYLENGSLSVILNNDTSAEE 57
LREI +L ++H N+V C + LV+++ E+ L+ +L+N
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFT 123
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112
L +R V++ + + L Y+H + I+HRD+ + NVL+ + ++DFG+A+
Sbjct: 124 LSEIKR--VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 85 IVHRDISSKNVLLDLEYEAHVSDFGIA---KFIQPDSSNWTEFAGTYGYVAPE-LAYTMK 140
+V+RD+ N+LLD +SD G+A +P +S GT+GY+APE L +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 141 VTAKCDVYSFGVLALEVIKGKHP 163
+ D +S G + ++++G P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 85 IVHRDISSKNVLLDLEYEAHVSDFGIA---KFIQPDSSNWTEFAGTYGYVAPE-LAYTMK 140
+V+RD+ N+LLD +SD G+A +P +S GT+GY+APE L +
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 366
Query: 141 VTAKCDVYSFGVLALEVIKGKHP 163
+ D +S G + ++++G P
Sbjct: 367 YDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSF--------LVYEYLENGSLSVILNNDTSAEE 57
LREI +L ++H N+V C + LV+++ E+ L+ +L+N
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFT 122
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112
L +R V++ + + L Y+H + I+HRD+ + NVL+ + ++DFG+A+
Sbjct: 123 LSEIKR--VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 141 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 194 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 85 IVHRDISSKNVLLDLEYEAHVSDFGIA---KFIQPDSSNWTEFAGTYGYVAPE-LAYTMK 140
+V+RD+ N+LLD +SD G+A +P +S GT+GY+APE L +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 141 VTAKCDVYSFGVLALEVIKGKHP 163
+ D +S G + ++++G P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 85 IVHRDISSKNVLLDLEYEAHVSDFGIA---KFIQPDSSNWTEFAGTYGYVAPE-LAYTMK 140
+V+RD+ N+LLD +SD G+A +P +S GT+GY+APE L +
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMAPEVLQKGVA 367
Query: 141 VTAKCDVYSFGVLALEVIKGKHP 163
+ D +S G + ++++G P
Sbjct: 368 YDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 5 FLREITVLTEIRHRN--IVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ EI L +++ + I++ Y + ++ ++V E N L+ L S + W R
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP--WER 129
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + K + A+ +H I VH D+ N L+ ++ + DFGIA +QPD+++
Sbjct: 130 K-SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVV 184
Query: 123 EFA--GTYGYVAPELAYTMKVTAK-----------CDVYSFGVLALEVIKGKHPRDFLSN 169
+ + GT Y+ PE M + + DV+S G + + GK P + N
Sbjct: 185 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 244
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
S ++ ++DP DI K + +V CL +P+ R
Sbjct: 245 QISK-----LHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 284
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 142 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 195 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 114 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 166
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 167 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 141 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 194 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 6 LREITVLTEIRHRNIVKFYGFCTHARHSF--------LVYEYLENGSLSVILNNDTSAEE 57
LREI +L ++H N+V C + LV+++ E+ L+ +L+N
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFT 123
Query: 58 LGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAK 112
L +R V++ + + L Y+H + I+HRD+ + NVL+ + ++DFG+A+
Sbjct: 124 LSEIKR--VMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 48 ILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVS 106
I EEL S V++ + H H+C ++HRDI +N+L+DL E +
Sbjct: 104 ITERGALQEELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLI 156
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DFG ++ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 157 DFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 212
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 156 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 209 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 142 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 195 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 156 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 209 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 256
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 113 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 165
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 166 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 141 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 194 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 142 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 195 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 141 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 194 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 241
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 48 ILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVS 106
I EEL S V++ + H H+C ++HRDI +N+L+DL E +
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLI 153
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DFG ++ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 154 DFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 113 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 165
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 166 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 213
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 161 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 213
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 214 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 261
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 142 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 195 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 242
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 48 ILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVS 106
I EEL S V++ + H H+C ++HRDI +N+L+DL E +
Sbjct: 128 ITERGALQEELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLI 180
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DFG ++ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 181 DFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 236
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 48 ILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVS 106
I EEL S V++ + H H+C ++HRDI +N+L+DL E +
Sbjct: 101 ITERGALQEELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLI 153
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DFG ++ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 154 DFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 209
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 48 ILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVS 106
I EEL S V++ + H H+C ++HRDI +N+L+DL E +
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLI 158
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DFG ++ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 159 DFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 128 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 180
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 181 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVK----FYGFCTHARHSFL--VYEYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ FY +L V +Y+ V + +
Sbjct: 61 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 120
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 121 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 177
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 178 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVK----FYGFCTHARHSFL--VYEYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ FY +L V +Y+ V + +
Sbjct: 92 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 151
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 152 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 208
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 209 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 128 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 180
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 181 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 228
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 48 ILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVS 106
I EEL S V++ + H H+C ++HRDI +N+L+DL E +
Sbjct: 140 ITERGALQEELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLI 192
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DFG ++ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 193 DFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 84 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 143
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 144 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 200
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 201 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 129 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 182 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 129 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 182 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 30/227 (13%)
Query: 5 FLREITVLTEIRHRN--IVKFYGFCTHARHSFLVYEYLENGSLSVILNNDTSAEELGWSR 62
+ EI L +++ + I++ Y + ++ ++V E N L+ L S + W R
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP--WER 157
Query: 63 RINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWT 122
+ + K + A+ +H I VH D+ N L+ ++ + DFGIA +QPD+++
Sbjct: 158 K-SYWKNMLEAVHTIHQHGI---VHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVV 212
Query: 123 EFA--GTYGYVAPELAYTMKVTAK-----------CDVYSFGVLALEVIKGKHPRDFLSN 169
+ + GT Y+ PE M + + DV+S G + + GK P + N
Sbjct: 213 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 170 VSSSNPNILVNEMLDPRLPPLSVDIRGKVISIMEVAFLCLDNNPESR 216
S ++ ++DP DI K + +V CL +P+ R
Sbjct: 273 QISK-----LHAIIDPNHEIEFPDIPEK--DLQDVLKCCLKRDPKQR 312
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 8 EITVLTEIRHRNIVKFYGFCTHARHSFLVYEYLENG-SLSVILNNDTSAEELGWSRRINV 66
EI +L+ + H NI+K + LV E +G L ++ +E S +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY---I 135
Query: 67 IKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEAHVSDFGIAKFIQPDSSNWTEFAG 126
+ + A+ YL + I+HRDI +N+++ ++ + DFG A +++ +T F G
Sbjct: 136 FRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCG 191
Query: 127 TYGYVAPELAYTMKVTA-KCDVYSFGVLALEVIKGKHP 163
T Y APE+ + +++S GV ++ ++P
Sbjct: 192 TIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 48 ILNNDTSAEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVS 106
I EEL S V++ + H H+C ++HRDI +N+L+DL E +
Sbjct: 106 ITERGALQEELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLI 158
Query: 107 DFGIAKFIQPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
DFG ++ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 159 DFGSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 214
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 149
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 150 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 207 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 56 EELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEY-EAHVSDFGIAKFI 114
EEL S V++ + H H+C ++HRDI +N+L+DL E + DFG +
Sbjct: 129 EELARSFFWQVLEAVRHC-----HNC--GVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
Query: 115 QPDSSNWTEFAGTYGYVAPE-LAYTMKVTAKCDVYSFGVLALEVIKGKHP 163
+ + +T+F GT Y PE + Y V+S G+L +++ G P
Sbjct: 182 K--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 229
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 1 DKKEFLREITVLTEIRHRNIVKF-YGFCTHARHSFLVY-----EYLENGSLSVILNNDTS 54
DK+ RE+ ++ ++ H NIV+ Y F + VY +Y+ V + +
Sbjct: 94 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRA 153
Query: 55 AEELGWSRRINVIKGIAHALSYLHHDCIPPIVHRDISSKNVLLDLEYEA-HVSDFGIAKF 113
+ L + + +L+Y+H I HRDI +N+LLD + + DFG AK
Sbjct: 154 KQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 210
Query: 114 IQPDSSNWTEFAGTYGYVAPELAY-TMKVTAKCDVYSFGVLALEVIKGK 161
+ N + Y Y APEL + T+ DV+S G + E++ G+
Sbjct: 211 LVRGEPNVSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,978,642
Number of Sequences: 62578
Number of extensions: 278757
Number of successful extensions: 3067
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 825
Number of HSP's gapped (non-prelim): 1086
length of query: 228
length of database: 14,973,337
effective HSP length: 95
effective length of query: 133
effective length of database: 9,028,427
effective search space: 1200780791
effective search space used: 1200780791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)